HHsearch alignment for GI: 254780202 and conserved domain: TIGR02494

>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family; InterPro: IPR012839 This subset of the radical-SAM domain includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centred radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4 from EC, IPR012838 from INTERPRO) and the anaerobic ribonucleotide reductase activating enzyme (IPR012837 from INTERPRO). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in Escherichia coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterisation and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain, which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines..
Probab=99.66  E-value=3.9e-16  Score=130.22  Aligned_cols=134  Identities=23%  Similarity=0.210  Sum_probs=82.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC--CCHHHHHHHHCCCEEEEECCCCCC------CCCCCEEE
Q ss_conf             8866078999999999875216678738998077200003--517899998689879997278886------67885079
Q gi|254780202|r   60 TKGGRYNVDQLADLIEEQWITGEKEGRYCVLTGGEPLLQV--DVPLIQALNKRGFEIAVETNGTIE------PPQGIDWI  131 (211)
Q Consensus        60 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~VviTGGEPllq~--l~~L~~~l~~~g~~v~IETnGt~~------~~~~~d~i  131 (211)
T Consensus       105 ~~G~~~tV~ev~~~~~~D~~fY~~SGGGvTlSGGEPl~Q~eF~~~LL~~c~~~gihTAvET~gft~~~~~~~~~~~~DLf  184 (305)
T TIGR02494       105 IVGKEMTVEEVMRVVLRDSIFYRNSGGGVTLSGGEPLLQPEFALALLKACRERGIHTAVETSGFTPWETIEKVLPYVDLF  184 (305)
T ss_pred             EECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             02451488999999986556665139906734871140158999999999758994676055688889999888877699


Q ss_pred             EECCCCCCCCCCCCH--HHHHHHHHHCCCCHHHHCCC-C-CCEEEECCCCC--CCCHHHHHHHHHHHHHC
Q ss_conf             841677741001212--35666530127685785377-8-57799824884--24688899999999967
Q gi|254780202|r  132 CVSPKAGCDLKIKGG--QELKLVFPQVNVSPENYIGF-D-FERFSLQPMDG--PFLEENTNLAISYCFQN  195 (211)
Q Consensus       132 t~SPK~~~~~~~~~~--~ElK~V~~~~~~~~~~~~~~-~-~~~~~LqP~~~--~~~~~~~~~~i~~~~~~  195 (211)
T Consensus       185 L~DiK~~D~~~H~~~tG~~N~~IL~NL--~~L~~~~~~GG~~v~iR~PvIpG~Nds~~~i~a~~~f~~~~  252 (305)
T TIGR02494       185 LYDIKHLDDERHKEVTGVDNELILENL--EALLAAGKDGGKNVVIRIPVIPGFNDSEENIEAIAEFLRKL  252 (305)
T ss_pred             HHHHHHCCCHHHHHHCCCCHHHHHHHH--HHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             872641180120553389837899999--99997178899558998720489898989999999999985