HHsearch alignment for GI: 254780202 and conserved domain: TIGR03365
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=100.00 E-value=0 Score=349.13 Aligned_cols=193 Identities=23% Similarity=0.277 Sum_probs=144.4
Q ss_pred CCCCEEEEE-ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHH
Q ss_conf 630124477-5105584013731599976898887555333323688887757523258--8866078999999999875
Q gi|254780202|r 2 KLYSIKEIF-LTLQGEGGHAGRVAVFCRFSGCNLWSGREQDRLSAQCRFCDTDFVGIQG--TKGGRYNVDQLADLIEEQW 78 (211)
Q Consensus 2 ~~~~i~EiF-~SiQGEG~~~G~p~vFiRl~GCnL~c~~~~~~~~~~C~~CDT~y~~~~~--~~~~~~~~~~i~~~i~~~~ 78 (211)
T Consensus 1 ~kl~v~EiF~~SiQGEG~~~G~p~vFvR~~GCnl-----------~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~~ 69 (238)
T TIGR03365 1 TKIPVLEIFGPTIQGEGMVIGQKTMFVRTGGCDY-----------RCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKALG 69 (238)
T ss_pred CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 9887787778955678813373189994089898-----------67658988761787887756378999999999834
Q ss_pred HCCCCCCCEEEEECCCCCCCC-CCHHHHHHHHCCCEEEEECCCCCCC--CCCCEEEEECCCCCCCC---CC---------
Q ss_conf 216678738998077200003-5178999986898799972788866--78850798416777410---01---------
Q gi|254780202|r 79 ITGEKEGRYCVLTGGEPLLQV-DVPLIQALNKRGFEIAVETNGTIEP--PQGIDWICVSPKAGCDL---KI--------- 143 (211)
Q Consensus 79 ~~~~~~~~~VviTGGEPllq~-l~~L~~~l~~~g~~v~IETnGt~~~--~~~~d~it~SPK~~~~~---~~--------- 143 (211)
T Consensus 70 ---~~~~~~V~iTGGEPllq~~~~~L~~~l~~~g~~v~iETnGt~~~~~~~~~d~~~~d~K~psSg~~~~~~~~~~~l~~ 146 (238)
T TIGR03365 70 ---GGTPLHVSLSGGNPALQKPLGELIDLGKAKGYRFALETQGSVWQDWFRDLDDLTLSPKPPSSGMETDWQALDDCIER 146 (238)
T ss_pred ---CCCCCEEEECCCCHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf ---89861899459983444189999999985798499978998760004557889996477999896346789999998
Q ss_pred ---CCHHHHHHHHHHCC---CCHHHHCCCCCCEEEECCCCCCCCHH--------H---HHHHHHHHHH-C--CCCEEEEE
Q ss_conf ---21235666530127---68578537785779982488424688--------8---9999999996-7--89779787
Q gi|254780202|r 144 ---KGGQELKLVFPQVN---VSPENYIGFDFERFSLQPMDGPFLEE--------N---TNLAISYCFQ-N--PKWRLSVQ 203 (211)
Q Consensus 144 ---~~~~ElK~V~~~~~---~~~~~~~~~~~~~~~LqP~~~~~~~~--------~---~~~~i~~~~~-~--~~~Rls~Q 203 (211)
T Consensus 147 ~~~~~~~~~KFVI~~~~D~~~a~ei~~~~~~~pv~l~p~~~~~~~~~~~~~~~~~~~~~~~L~e~~~~~~~~~~vR~~~Q 226 (238)
T TIGR03365 147 LDDGPQTSLKVVVFDDADYAYAKEVHARYPDLPFYLQPGNHTPPPSDDDDLIDGLLDRYEWLVEKVAADREWFDVRVLPQ 226 (238)
T ss_pred HCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf 44489706999976789999999999974799789656888568520124578899999999999997475478478820
Q ss_pred EHHHC
Q ss_conf 34402
Q gi|254780202|r 204 THKFI 208 (211)
Q Consensus 204 ~HK~l 208 (211)
T Consensus 227 LHk~I 231 (238)
T TIGR03365 227 LHVLL 231 (238)
T ss_pred EEHHE
T ss_conf 22510