HHsearch alignment for GI: 254780202 and conserved domain: TIGR03365

>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=100.00  E-value=0  Score=349.13  Aligned_cols=193  Identities=23%  Similarity=0.277  Sum_probs=144.4

Q ss_pred             CCCCEEEEE-ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHH
Q ss_conf             630124477-5105584013731599976898887555333323688887757523258--8866078999999999875
Q gi|254780202|r    2 KLYSIKEIF-LTLQGEGGHAGRVAVFCRFSGCNLWSGREQDRLSAQCRFCDTDFVGIQG--TKGGRYNVDQLADLIEEQW   78 (211)
Q Consensus         2 ~~~~i~EiF-~SiQGEG~~~G~p~vFiRl~GCnL~c~~~~~~~~~~C~~CDT~y~~~~~--~~~~~~~~~~i~~~i~~~~   78 (211)
T Consensus         1 ~kl~v~EiF~~SiQGEG~~~G~p~vFvR~~GCnl-----------~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~~   69 (238)
T TIGR03365         1 TKIPVLEIFGPTIQGEGMVIGQKTMFVRTGGCDY-----------RCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKALG   69 (238)
T ss_pred             CCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             9887787778955678813373189994089898-----------67658988761787887756378999999999834


Q ss_pred             HCCCCCCCEEEEECCCCCCCC-CCHHHHHHHHCCCEEEEECCCCCCC--CCCCEEEEECCCCCCCC---CC---------
Q ss_conf             216678738998077200003-5178999986898799972788866--78850798416777410---01---------
Q gi|254780202|r   79 ITGEKEGRYCVLTGGEPLLQV-DVPLIQALNKRGFEIAVETNGTIEP--PQGIDWICVSPKAGCDL---KI---------  143 (211)
Q Consensus        79 ~~~~~~~~~VviTGGEPllq~-l~~L~~~l~~~g~~v~IETnGt~~~--~~~~d~it~SPK~~~~~---~~---------  143 (211)
T Consensus        70 ---~~~~~~V~iTGGEPllq~~~~~L~~~l~~~g~~v~iETnGt~~~~~~~~~d~~~~d~K~psSg~~~~~~~~~~~l~~  146 (238)
T TIGR03365        70 ---GGTPLHVSLSGGNPALQKPLGELIDLGKAKGYRFALETQGSVWQDWFRDLDDLTLSPKPPSSGMETDWQALDDCIER  146 (238)
T ss_pred             ---CCCCCEEEECCCCHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             ---89861899459983444189999999985798499978998760004557889996477999896346789999998


Q ss_pred             ---CCHHHHHHHHHHCC---CCHHHHCCCCCCEEEECCCCCCCCHH--------H---HHHHHHHHHH-C--CCCEEEEE
Q ss_conf             ---21235666530127---68578537785779982488424688--------8---9999999996-7--89779787
Q gi|254780202|r  144 ---KGGQELKLVFPQVN---VSPENYIGFDFERFSLQPMDGPFLEE--------N---TNLAISYCFQ-N--PKWRLSVQ  203 (211)
Q Consensus       144 ---~~~~ElK~V~~~~~---~~~~~~~~~~~~~~~LqP~~~~~~~~--------~---~~~~i~~~~~-~--~~~Rls~Q  203 (211)
T Consensus       147 ~~~~~~~~~KFVI~~~~D~~~a~ei~~~~~~~pv~l~p~~~~~~~~~~~~~~~~~~~~~~~L~e~~~~~~~~~~vR~~~Q  226 (238)
T TIGR03365       147 LDDGPQTSLKVVVFDDADYAYAKEVHARYPDLPFYLQPGNHTPPPSDDDDLIDGLLDRYEWLVEKVAADREWFDVRVLPQ  226 (238)
T ss_pred             HCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf             44489706999976789999999999974799789656888568520124578899999999999997475478478820


Q ss_pred             EHHHC
Q ss_conf             34402
Q gi|254780202|r  204 THKFI  208 (211)
Q Consensus       204 ~HK~l  208 (211)
T Consensus       227 LHk~I  231 (238)
T TIGR03365       227 LHVLL  231 (238)
T ss_pred             EEHHE
T ss_conf             22510