HHsearch alignment for GI: 254780205 and conserved domain: COG0382
>COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=396.82 Aligned_cols=284 Identities=31% Similarity=0.498 Sum_probs=263.7
Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877
Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310)
Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310)
T Consensus 4 ~~~~~~~~~~~~l~r~~r~i~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~l~~~~~~~ag~~iND~~D~ei 74 (289)
T COG0382 4 MSLPNKLKALLKLLRLDRPIFNLLLLLPALLGLLLAASGLP---------SLKLLLLAFLAFFLARSAGYVINDLADREI 74 (289)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 30035699999999712499899999999999999864441---------799999999999999999999999961763
Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 84342343101001233210110013443100034555444443210035654443116655554332001010014566
Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGV 172 (310)
Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~ 172 (310)
T Consensus 75 D~~n~rt~~RPl~sG~vS~~~a~~~~~~~~~~~~~~a~~l~~~~~~l~~~~~~l~~~Y~~~Kr~~~~~~~~lg~~~~~~~ 154 (289)
T COG0382 75 DRINPRTKNRPLPSGRVSVKEALLLAILLLLLGLALALLLNPLAFLLSLAALVLALAYPFLKRFTFLPQLVLGLAFGLGA 154 (289)
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 06799866799987876799999999999999999999970999999999999999999852577315999999999999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 30111457543202468888874210035799888753100025720346654202046665337899999999999835
Q gi|254780205|r 173 FVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLT 252 (310)
Q Consensus 173 l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~ 252 (310)
T Consensus 155 ~~g~~a~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~D~e~D~~~G~~s~~~~~G~~~a~~l~~~~~~~~~~~~~~~~~~~ 234 (289)
T COG0382 155 LAGAAAVGGSLPLLAWLLLLAAILWTLGYDIIYAIQDIEGDRKAGLKSLPVLFGIKKALALALLLLLASALLVLLGLLAG 234 (289)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999975853389999999999999999999987524319876972033885754489999999999999999999998
Q ss_pred CCH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 337-99999999999999999980899979999998764599999999999998
Q gi|254780205|r 253 VNF-FAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISL 305 (310)
Q Consensus 253 ~~~-~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310)
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (289)
T COG0382 235 LLGLIYLLGLLVAALLLLYQILIVDVRDPPACFALFDVNLLLGLLLFIGLILAV 288 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 719999999999999999999997342214579999983699999999999974