HHsearch alignment for GI: 254780205 and conserved domain: PRK05951

>PRK05951 ubiA prenyltransferase; Reviewed.
Probab=99.89  E-value=6.6e-22  Score=152.51  Aligned_cols=278  Identities=14%  Similarity=0.124  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             67789999863048531599899999999985212343344564216999999999999998999999641388778434
Q gi|254780205|r   17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV   96 (310)
Q Consensus        17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~   96 (310)
T Consensus         2 ~~~k~~~~a~R---P~tl~asi~pv~lG~a~A~~~~g~---f----~~~~~ll~ll~~~l~q~~~Nl~NDY~D~~~G~D~   71 (296)
T PRK05951          2 TRDKEFFIQTR---PWSFVMTIISTSFGYSYGFYLIGS---F----DPLLSWAILLGCVLLHASANVLNDYFDYVLGIDT   71 (296)
T ss_pred             CCHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHCCC---C----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             50889999967---037699999999999999997698---7----5999999999999999999985618888457756


Q ss_pred             -CCCC--CHHHHCCCCCHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHHHHCC---C-CCCCCCCCCHHHH
Q ss_conf             -2343--10100123321011001344310003455----5444443210035654443116---6-5555433200101
Q gi|254780205|r   97 -LRTR--SRPLPSGQCTRFQALVFAVLQFLISFVLL----LQFNPFVICVGFALLFISLLYP---F-SKRFILCPQVVLG  165 (310)
Q Consensus        97 -~RT~--~RPl~sG~is~~~A~~~~~~l~~l~~~~~----~~ln~~~~~l~~~~~~~~~iYp---~-~KR~t~~p~~~lG  165 (310)
T Consensus        72 ~~~~~~~~~~i~~g~ls~~~v~~~~~~~~~~a~~~G~~L~~~~~~~~l~lg~~g~~~~~~YTggP~~l~y-~gLGel~v~  150 (296)
T PRK05951         72 RETTGYRPHPIIAGIMSLGNVRVLGIALGCIALQLGGALFLDRRPLAVLLALLGVFLLYCYMGPPFNLKY-RALGELLVF  150 (296)
T ss_pred             CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCHHHHH
T ss_conf             7667888536883797899999999999999999999999985599999999999999998179976656-661079999


Q ss_pred             HHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf             00145-66301114575432024688888742100357998887531000257203466542020466653378999999
Q gi|254780205|r  166 IGFAG-GVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCF  244 (310)
Q Consensus       166 ~~~~~-~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~  244 (310)
T Consensus       151 i~fG~l~v~g~~y~qtg~~~~~~~l~s~p~gll~~~IL~~Nn~rD~e~D~~~Gk~Tl~v~lG~~~a~~~~~~l~~~~y~~  230 (296)
T PRK05951        151 IAWGHLMVLGLIYVWTGNISSPNVLAGVPLGLLVAAVLLANNLRDIEDDERLGAPTLAVIFGRKSAVALYAFALLSPYLI  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHH
T ss_conf             99899999999999918776999999999999999999987862215499769976487867575999999999999999


Q ss_pred             HHHHHHHCCCHHHHHHHHHHH---HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999998353379999999999---999999998089997999999876459999999999999865
Q gi|254780205|r  245 MVAFCLLTVNFFAWIGLLIAL---FLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFL  307 (310)
Q Consensus       245 ~~~~~~~~~~~~~~~~~l~~~---~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL  307 (310)
T Consensus       231 ~~~~~~~~~~p~~~ll~lltlPla~~l~~~~~~~~~~~--~~~~T~~l~~~fg~l~~~g~lls~l~  294 (296)
T PRK05951        231 LVILVIAILLPLISLWALLTLPVAYALCLWQSRKFPHD--ADPATAQIFMVFGYLYILGTLLSKLV  294 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999986605999999999999999999997525455--53899999999999999999999872