HHsearch alignment for GI: 254780205 and conserved domain: PRK12869
>PRK12869 ubiA prenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=419.97 Aligned_cols=273 Identities=20% Similarity=0.247 Sum_probs=234.1
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 78999986304853159989999999998521234334456421699999999999999899999964138877843423
Q gi|254780205|r 19 IAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLR 98 (310)
Q Consensus 19 i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~R 98 (310)
T Consensus 1 lk~Y~~L~---Kp~~~~l~~~~~~~g~~la~~~~~----------~~~~~~~~~g~~l~~~~~~~~N~~~DrdiD~~m~R 67 (278)
T PRK12869 1 LNPYLKLL---KPRVIWLLDLAAVAGYIYAAGGVD----------WGSLIALLIVGTLASGGSAAFNHYWERDIDAVMKR 67 (278)
T ss_pred CHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 97689895---599999999999999999389998----------79999999999999999999983887434768888
Q ss_pred CCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHH-HHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 431010012332101100134431000345554-44443210035-6544431166-55554332001010014566301
Q gi|254780205|r 99 TRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQ-FNPFVICVGFA-LLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVG 175 (310)
Q Consensus 99 T~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~-ln~~~~~l~~~-~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g 175 (310)
T Consensus 68 T~~RPlpsG~is~~~a~~~~~~l~~~g~~~~~~~~~~~~a~~~~~~~~~y~~iYt~~lKr~t~~~~~igg~~ga~p~l~G 147 (278)
T PRK12869 68 TSKRPLPSGLVSPKEALAYSLALSALGILLGFLLLGPLPGLFIALGWFFYAVVYTIWLKRRTWLNIVIGGFAGNAAFLAG 147 (278)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 88884325888899999999999999999999999999999999999999999876252066186999999888999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 11457543202468888874210035799888753100025720346654202-04666533789999999999983533
Q gi|254780205|r 176 WGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQ-TKLWLFILYGIFVLCFMVAFCLLTVN 254 (310)
Q Consensus 176 ~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310)
T Consensus 148 w~a~~g~~~~~~~~l~~~~~~W~~~hf~~~a~~~~edy~~aGi~mlp~~~g~~~t~~~i~~~~~~~~~~~~~~~~~~~~g 227 (278)
T PRK12869 148 YALGKGSVDLPAVLLSFAIYLWIPGHIWALAYKYREDYRRAGVPMLPAVVDEKTAVRAISILNAASIPYILLLYLYFGGG 227 (278)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99983999858999999999998999999999947609867998886211862499999999999999999999998714
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 799999999-99999999998089997999999876459999999999999
Q gi|254780205|r 255 FFAWIGLLI-ALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIIS 304 (310)
Q Consensus 255 ~~~~~~~l~-~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild 304 (310)
T Consensus 228 ~~y~~~~~~~~~~~l~~~~~~~~~~~~~~a~k~F~~S~~yl~llfi~lvl~ 278 (278)
T PRK12869 228 LIGLILVAAGVAATLATSIRALVNPTDEAMWKMFKASSPYLALFLLALIIS 278 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999999999728987999999999999999999999979