HHsearch alignment for GI: 254780205 and conserved domain: PRK12872

Probab=99.89  E-value=3.4e-22  Score=154.23  Aligned_cols=224  Identities=12%  Similarity=-0.031  Sum_probs=135.6

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHHH
Q ss_conf             99999899999964138877843423431010012332101100134431000345554444----43210035654443
Q gi|254780205|r   73 GAIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNP----FVICVGFALLFISL  148 (310)
Q Consensus        73 G~~~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~----~~~~l~~~~~~~~~  148 (310)
T Consensus        54 ~~~l~~aagYiIN~~~D~e~D~IN~--P~r~~~~~~is~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  131 (297)
T PRK12872         54 ITFLLALSVYSINYLTDLDEDRINN--PERVEFLKKIGEKLAYNFFFLAVLGVYLGAYLSSVIMRPAFASIFILGIIYLY  131 (297)
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHCCC--CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999998725640220311341479--86233101003999999999999999999999999998999999999999999


Q ss_pred             HCC-CCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             116-65555433200101001456630-1114575432024688888742100357998887531000257203466542
Q gi|254780205|r  149 LYP-FSKRFILCPQVVLGIGFAGGVFV-GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS  226 (310)
Q Consensus       149 iYp-~~KR~t~~p~~~lG~~~~~~~l~-g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G  226 (310)
T Consensus       132 ~Ys~~LK~ip~~gNl~va~l~a~~~~~~~i~~~~~~~~~~i~~~a~F~fl~~lireivkDi~di~GD~~~g~~TlPi~~G  211 (297)
T PRK12872        132 LYKRRLKQIPLFKNLLVALVWGLSITILPVLYGGLATDSALLLVAAFAFLKNFVNTIVFDIKDIEGDRNSGLKTLPIILG  211 (297)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECHHHH
T ss_conf             98999863510889999999999999999999934300899999999999999999971575131548669831483523


Q ss_pred             H-CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0-20466653378999999999998353379999999999999999998089997999999876459999999999
Q gi|254780205|r  227 Y-QTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICL  301 (310)
Q Consensus       227 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~i  301 (310)
T Consensus       212 ~~~tk~ii~~l~~~~~~~~~~l~~~~~~~~~~y~~~~~~~~l~~~~i~l~~a~~~~~y~~---l~~~lK~iil~Gv  284 (297)
T PRK12872        212 KRRTLRFLTILNLLPLALLVLGVYTGVFPTGLYLLLFPLSAYVFFYIKITKADRKPLFLY---LSVDGEWVLLAGL  284 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHH
T ss_conf             588999999999999999999999988769999999999999999999998276678999---9999999999999