HHsearch alignment for GI: 254780205 and conserved domain: PRK12876

>PRK12876 ubiA prenyltransferase; Reviewed.
Probab=100.00  E-value=0  Score=440.49  Aligned_cols=287  Identities=18%  Similarity=0.172  Sum_probs=234.9

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             778999986304853159989999-9999985212343344564216999999999999998999999641388778434
Q gi|254780205|r   18 AIAPYVYLARWHSSTGWHLAVLPC-LWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV   96 (310)
Q Consensus        18 ~i~~Y~~L~R~~kp~g~~ll~~p~-~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~   96 (310)
T Consensus         2 k~k~~~~likf~Hti----FalPFa~~~~~~a~~~~~~~~~~~~~~~w~~l~~~~~a~v~aRsagm~~Nr~~Dr~iD~~n   77 (299)
T PRK12876          2 RIKYFQQLINCKYAL----FSALFLSASTVFALSLPEISQNLFSKEGFKIIVLGGSAFFCARTVGIIVNQIIDRAIDKKN   77 (299)
T ss_pred             CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             699999999885699----9899999999999627655555444324999999999999997898599986241547899


Q ss_pred             CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             23431010012332101100134431000345554444432100356544431166555543320010100145663011
Q gi|254780205|r   97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGW  176 (310)
Q Consensus        97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~  176 (310)
T Consensus        78 pRT~~Rpl~~G~is~~~a~~~~~~~~~~~~~~~~~lN~l~~~Ls~~~l~~~~~Yp~~KRft~~~h~~LG~~~~~a~~~~~  157 (299)
T PRK12876         78 PRTSKRVLPAKLLSINFSWLLLLLCSFLFLSLCWFLNPLCFSLAVLSTLLMIVYPYTKRVTFLCHWILGLVYYLAILMNF  157 (299)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             77789988788879989999999999999999999729999999999999999787776121179999999999999999


Q ss_pred             CCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf             14575432-----0246888887421003579988875310002572034665420204666-53378999999999998
Q gi|254780205|r  177 GALHASFS-----WPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGIFVLCFMVAFCL  250 (310)
Q Consensus       177 ~av~g~~~-----~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~~~~~~~~~~~~  250 (310)
T Consensus       158 ~Av~~~~~~~~l~~~~~l~~~~~~~wvagfD~iYA~qD~e~D~k~Gl~S~p~~fG~~~al~ia~~~h~~~~l~~~~~g~~  237 (299)
T PRK12876        158 FAIIETPLSFSLFCMASLWGISFGMIIAANDIIYAIQDLEFDREEGLFSIPARFGEKKAIRIASVNLIVSALAYILSGYF  237 (299)
T ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99818751179999999999999999975357887167754998498633898696008999999999999999999999


Q ss_pred             HCCCHHHHHHHH--HHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             353379999999--99999-99999980899979999998764599999999999998652
Q gi|254780205|r  251 LTVNFFAWIGLL--IALFL-TIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD  308 (310)
Q Consensus       251 ~~~~~~~~~~~l--~~~~~-l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~  308 (310)
T Consensus       238 ~~~~~~~y~~~l~~~~~~l~~~~h~~~~~~~~s~~~~aFF~~N~~igli~Fi~ii~~~~l~  298 (299)
T PRK12876        238 VSNKKEFYLCSLIPLVVILKTIKHYSLIDKKKSELEQKFFLGNIYLALSFFVNMIGLFLLS  298 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_conf             9854899999999999999999999972899505889999850899999999999999706