HHsearch alignment for GI: 254780205 and conserved domain: PRK12887

Probab=99.95  E-value=1.7e-27  Score=186.51  Aligned_cols=265  Identities=18%  Similarity=0.195  Sum_probs=165.0

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             54677899998630485315998999999999852123433445642169999999999999989999996413887784
Q gi|254780205|r   15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS   94 (310)
Q Consensus        15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~   94 (310)
T Consensus        10 ~~~~l~a~~~FsRPhTiiGT~l~v---~~~~l~a~~~~~~~~~~--~-~~~~~l~~~~a~l~~NiyiVGlNq~~D~eIDk   83 (309)
T PRK12887         10 MMPWLYALWKFSRPHTIIGTSLSV---LGLYLIAIAVSSNSFAL--T-NLGLLLGAWVACLCGNVYIVGLNQLTDIEIDR   83 (309)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHCCCCCCH--H-HHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHH
T ss_conf             666899999873847999899999---99999997516763338--9-99999999999995132033101466554131


Q ss_pred             CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC----CCCCCCCCCHHH----HH
Q ss_conf             3423431010012332101100134431000345554444432100356544431166----555543320010----10
Q gi|254780205|r   95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF----SKRFILCPQVVL----GI  166 (310)
Q Consensus        95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~----~KR~t~~p~~~l----G~  166 (310)
T Consensus        84 INk--P~lPIpSG~is~~~g~~iv~~~~~lsl~la~~lg~~l~~~~~i~l~lg~aYS~PpLRlKr~~~~aalcI~~vrg~  161 (309)
T PRK12887         84 INK--PHLPLAAGEFSRRQGQIIVIITGILALILAALLGPWLLLTVGISLLIGTAYSLPPIRLKRFPLLAALCIFTVRGV  161 (309)
T ss_pred             CCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH
T ss_conf             268--899888777668889999999999999999997078999999999999998078466543323777887776779


Q ss_pred             HHHHHHHH--CCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH-HHHHHHHH
Q ss_conf             01456630--111-457543202468888874210035799888753100025720346654202046665-33789999
Q gi|254780205|r  167 GFAGGVFV--GWG-ALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLF-ILYGIFVL  242 (310)
Q Consensus       167 ~~~~~~l~--g~~-av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~-~~~~~~~~  242 (310)
T Consensus       162 iv~lg~~~~~~~~~~~~~~~~~~i~~~t~f~~~fa~~Iai~KDipDIEGDr~~GI~Tl~V~LG~k~v~~l~~~ll~~~Y~  241 (309)
T PRK12887        162 IVNLGLFLHFQWLLQGPVEIPPPVWVLTLFVLVFTFAIAIFKDIPDMEGDRQYNITTFTLRLGKQRVFKLSCWVLTACYL  241 (309)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99889999999997577778837999999999999999998157423432751976543475389999999999999999


Q ss_pred             HHHHHHHHHCCCH--HH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             9999999835337--99-999999999999999980899979999998
Q gi|254780205|r  243 CFMVAFCLLTVNF--FA-WIGLLIALFLTIKRIIALDISCSKQCCSFF  287 (310)
Q Consensus       243 ~~~~~~~~~~~~~--~~-~~~~l~~~~~l~~~i~~~~~~~~~~~~k~F  287 (310)
T Consensus       242 ~~i~~g~~~~~~~~~~~~~~~H~~l~~~l~~~~~~vdl~~k~~i~sfY  289 (309)
T PRK12887        242 GMIAVGLLFLPSINSAFLIVSHLLLLALLWWRSQRVDLEDKSAIAQFY  289 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             999999972466888999999999999999997307853468999999