HHsearch alignment for GI: 254780205 and conserved domain: PRK13106
>PRK13106 ubiA prenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=501.63 Aligned_cols=278 Identities=20% Similarity=0.199 Sum_probs=256.3
Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 46778999986304853159989999999998521234334456421699999999999999899999964138877843
Q gi|254780205|r 16 GSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQ 95 (310)
Q Consensus 16 ~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~ 95 (310)
T Consensus 12 ~~K~~~y~~l~r~~~~if~L---p~a~~~~~lA~~g~p---------~~~~l~~~~lg~~~~Rsagc~iNdi~Dr~iD~~ 79 (299)
T PRK13106 12 RSKLYIYLRFLRIEQTFFSL---PMAYMGAFLAIRGIP---------PIRTLILIFLALFFLRTAGMTNDNLADREIDAK 79 (299)
T ss_pred HHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 77999999999982499999---999999999728999---------899999999999999999989998605174468
Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 42343101001233210110013443100034555444443210035654443116655554332001010014566301
Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVG 175 (310)
Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g 175 (310)
T Consensus 80 v~RT~~RPL~sG~is~~~A~~~~~~~~~~~~~~~~~ln~~~~~ls~~~~~~~~~YP~~KRft~~pq~~LG~~~~~~~~~~ 159 (299)
T PRK13106 80 NPRTRTRPLVTGAITVREAWLLIAAGLIGYFASAYLLNRYALLLSPIVALIAMSYPYMKRYTAFANYHLASVQGLAVFSG 159 (299)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 96668888766887999999999999999999999974999999999999999999988730133699999999789999
Q ss_pred CCCCCCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 11457543--------2024688888742100357998887531000257203466542020466653378999999999
Q gi|254780205|r 176 WGALHASF--------SWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVA 247 (310)
Q Consensus 176 ~~av~g~~--------~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~ 247 (310)
T Consensus 160 ~~a~~g~~~~~~~~~~~~~~~ll~~a~~~W~~~yDtiYA~qD~~dD~~~Gi~S~a~~fG~~~~~~~~~~~~~~~~ll~~~ 239 (299)
T PRK13106 160 AVASLGLEATSLTQVLRSVPWLFVIATILWAVGFDLYNHIPDADFDRKMGLHSFAVLLGNKALAFAGLNQLASVLLAIAG 239 (299)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99985320012354667899999999999999985988737822327659870288885779999999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9983533799999999999999999980899979999998764599999999999998652
Q gi|254780205|r 248 FCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310)
T Consensus 240 g~~~~lg~~~~~~~~i~~~~~~yq~~l~~---~~d~~~aF~~N~~iGlilf~gi~ld~llg 297 (299)
T PRK13106 240 DIAYGLGPIAYAATVLHGLIMAYAYYLAS---KGNFGRAFYYNIYSSIVLGLGIIIDVLLG 297 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHCCHHHHHHHHHHHHHHHHC
T ss_conf 99986279999999999999999999589---53099999861899999999999999818