HHsearch alignment for GI: 254780205 and conserved domain: PRK13362
>PRK13362 protoheme IX farnesyltransferase; Provisional.
Probab=100.00 E-value=0 Score=378.31 Aligned_cols=285 Identities=15% Similarity=0.123 Sum_probs=239.6
Q ss_pred HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 41054677899998630485315998999999999852123433445642169999999999999989999996413887
Q gi|254780205|r 12 DCIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD 91 (310)
Q Consensus 12 ~~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d 91 (310)
T Consensus 6 ~~~~~s~lk~y~~Lt---Kpri~~lv~~ta~~g~~lA~~~~---------~~~~~~l~~~lG~~l~~~sa~~~N~~~erd 73 (306)
T PRK13362 6 SRQWEASVKDYFQVT---KPGIIFGNVISVAGGFFLASKGH---------VDPVLMLAAVIGLSLVVASGCALNNCIDRD 73 (306)
T ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 453565599999986---09999999999999999817899---------999999999999999999999987157644
Q ss_pred CCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH-HHHHCC-CCCCCCCCCCHHHHHHH
Q ss_conf 784342343101001233210110013443100034555-444443210035654-443116-65555433200101001
Q gi|254780205|r 92 IDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL-QFNPFVICVGFALLF-ISLLYP-FSKRFILCPQVVLGIGF 168 (310)
Q Consensus 92 iD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~-~ln~~~~~l~~~~~~-~~~iYp-~~KR~t~~p~~~lG~~~ 168 (310)
T Consensus 74 iD~~M~RT~~RPlp~g~is~~~A~~~~~~l~~~g~~~l~~~~N~~~a~l~~~~~~~Y~~iYT~~lKr~t~~n~~iG~i~G 153 (306)
T PRK13362 74 IDAKMQRTANRVTVTGEISLGEALGFGLALGVLGFGLLAAFTNPLAALFAAFGYVVYVGIYSLYLKRNSVYGTLVGSLSG 153 (306)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 56899999999777788878899999999999999999997889999999998532788778778417641026787740
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45663011145754320246888887421003579988875310002572034665420204666533789999999999
Q gi|254780205|r 169 AGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAF 248 (310)
Q Consensus 169 ~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~ 248 (310)
T Consensus 154 a~PpliGw~A~~g~l~~~~~~Lf~i~f~Wq~pHF~alA~~~r~DY~~Ag~pMLPv~~g~~~T~~~i~~y~~~l~~~sll~ 233 (306)
T PRK13362 154 AMPPVVGYCAVTGQFDAGALILLLMFSLWQMPHSYAIAIFRFNDYAAAGIPVLPVARGIAKTKLHIVLYILVFALVTLLL 233 (306)
T ss_pred HHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01035413100699886899999999997569999999980875986899747577773779999999999999999999
Q ss_pred HH-HCCCHHHHHHH-HHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98-35337999999-9999999999998089--9979999998764599999999999998652
Q gi|254780205|r 249 CL-LTVNFFAWIGL-LIALFLTIKRIIALDI--SCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310)
Q Consensus 249 ~~-~~~~~~~~~~~-l~~~~~l~~~i~~~~~--~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310)
T Consensus 234 ~~~g~~g~~y~~~a~~l~~~~l~~~~~~~~~~~~~~~~ArklF~~Si~YL~llf~~l~lD~~v~ 297 (306)
T PRK13362 234 PLAGYTGIGYLAVAAATSLWWLAMALKGYRHAVDDLKWARQLFAFSILTITALSVMMLLDFVVA 297 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9987604999999999999999999999861578659999999999999999999999998215