HHsearch alignment for GI: 254780205 and conserved domain: PRK13591

>PRK13591 ubiA prenyltransferase; Provisional.
Probab=98.30  E-value=4.3e-07  Score=62.35  Aligned_cols=153  Identities=23%  Similarity=0.302  Sum_probs=74.4

Q ss_pred             HHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CC--CC---
Q ss_conf             9964138877843423431010012332101100134431000345554444432100356544431166-55--55---
Q gi|254780205|r   83 TWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SK--RF---  156 (310)
Q Consensus        83 ~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~K--R~---  156 (310)
T Consensus        76 tLdRald~eEDaiNr--~El~g~nk~i----gl~~sl~afl~g~~il~~~Gi--l~~~f~Pli~GylYSkgikigk~~~K  147 (304)
T PRK13591         76 TLDRALDSEEDAVNR--KELIGSNKKI----GLAVSLLAFLIGTYILAREGM--LLLAFLPLITGYLYSKGIKIGKFALK  147 (304)
T ss_pred             EECCCCCCHHHCCCC--HHHCCCCCHH----HHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHEEEEECCCCEEEEEEEE
T ss_conf             721122760210451--7650753102----499999999999999885632--75446556311022146123101588


Q ss_pred             ----CCCCCHHHHHHHHHHHHHCCCCCC--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-C
Q ss_conf             ----433200101001456630111457--54-320246888887421003579988875310002572034665420-2
Q gi|254780205|r  157 ----ILCPQVVLGIGFAGGVFVGWGALH--AS-FSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSY-Q  228 (310)
Q Consensus       157 ----t~~p~~~lG~~~~~~~l~g~~av~--g~-~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~-~  228 (310)
T Consensus       148 LKgg~gvKniIVg~tW--g~~iA~l~~~~~~s~~~v~iVf~FFg~kl--FINS~V~DfkDVkGD~~AGIkTLP~~LG~~~  223 (304)
T PRK13591        148 LKGGLGVKNIVVGITW--GAFIAGLAGSYCGSMLPVVLVFLFFGVKL--FINSAIYDFKDIKGDTLAGIKTLPVSLGEQK  223 (304)
T ss_pred             ECCCCCCEEEEEEEEC--CCHHHHHHHHCCCCCCHHHHHHHHHHHHH--HHHHHHCCCHHCCCCHHCCCCCCCHHHCCHH
T ss_conf             5277762048998751--32266653420256414578899998999--8752310021036644307000762316325


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             0466653378999999999
Q gi|254780205|r  229 TKLWLFILYGIFVLCFMVA  247 (310)
Q Consensus       229 ~~~~i~~~~~~~~~~~~~~  247 (310)
T Consensus       224 Tr~~L~~ihl~sh~vl~~a  242 (304)
T PRK13591        224 TRNLLLGIHLFSHLVLGIA  242 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             6649999999999999999