Query gi|254780205|ref|YP_003064618.1| prenyltransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 310 No_of_seqs 167 out of 2519 Neff 7.3 Searched_HMMs 39220 Date Mon May 23 13:03:52 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780205.hhm -d /home/congqian_1/database/cdd/Cdd.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 TIGR01474 ubiA_proteo 4-hydrox 100.0 0 0 643.5 17.6 284 19-306 1-291 (291) 2 PRK12878 ubiA prenyltransferas 100.0 0 0 607.9 19.5 296 6-306 18-313 (314) 3 PRK12894 consensus 100.0 0 0 566.8 19.5 280 18-306 3-282 (282) 4 PRK12870 ubiA prenyltransferas 100.0 0 0 560.3 20.1 287 12-307 2-289 (289) 5 PRK12848 ubiA 4-hydroxybenzoat 100.0 0 0 555.5 20.1 282 15-305 1-282 (282) 6 PRK12877 consensus 100.0 0 0 552.5 19.8 283 17-307 1-283 (283) 7 PRK12847 ubiA prenyltransferas 100.0 0 0 547.8 20.2 283 14-304 2-284 (284) 8 PRK12873 ubiA prenyltransferas 100.0 0 0 548.9 18.8 284 13-305 4-295 (297) 9 PRK12888 ubiA prenyltransferas 100.0 0 0 531.2 20.6 286 14-308 22-309 (313) 10 KOG1381 consensus 100.0 0 0 520.2 7.6 290 14-310 59-349 (353) 11 PRK13106 ubiA prenyltransferas 100.0 0 0 501.6 18.5 278 16-308 12-297 (299) 12 PRK12886 ubiA prenyltransferas 100.0 0 0 486.8 20.6 284 15-310 4-289 (291) 13 PRK12895 ubiA prenyltransferas 100.0 0 0 487.3 19.9 279 18-309 2-284 (286) 14 PRK12874 ubiA prenyltransferas 100.0 0 0 485.2 20.2 287 15-308 4-291 (291) 15 PRK12876 ubiA prenyltransferas 100.0 0 0 440.5 18.9 287 18-308 2-298 (299) 16 TIGR01475 ubiA_other 4-hydroxy 100.0 0 0 420.5 18.1 287 18-307 1-301 (301) 17 PRK12869 ubiA prenyltransferas 100.0 0 0 420.0 18.5 273 19-304 1-278 (278) 18 PRK04375 protoheme IX farnesyl 100.0 0 0 413.4 20.4 285 13-309 10-300 (303) 19 PRK12871 ubiA prenyltransferas 100.0 0 0 416.3 16.2 280 15-306 1-296 (297) 20 COG0382 UbiA 4-hydroxybenzoate 100.0 0 0 396.8 20.1 284 13-305 4-288 (289) 21 TIGR01473 cyoE_ctaB protoheme 100.0 0 0 393.8 18.3 280 20-305 1-297 (297) 22 PRK13362 protoheme IX farnesyl 100.0 0 0 378.3 19.4 285 12-308 6-297 (306) 23 COG0109 CyoE Polyprenyltransfe 100.0 0 0 370.4 18.8 282 15-308 14-300 (304) 24 PRK12884 ubiA prenyltransferas 100.0 0 0 366.2 17.9 277 15-305 1-280 (281) 25 PRK12882 ubiA prenyltransferas 100.0 0 0 347.0 18.3 269 18-300 3-274 (276) 26 PRK09573 (S)-2,3-di-O-geranylg 100.0 0 0 329.5 16.7 275 18-307 2-279 (280) 27 PRK13593 consensus 100.0 0 0 323.2 18.5 275 14-306 3-279 (283) 28 PRK12883 ubiA prenyltransferas 100.0 0 0 317.1 18.6 270 18-306 2-273 (275) 29 PRK13594 consensus 100.0 2.7E-40 7E-45 264.4 16.4 270 18-306 2-277 (278) 30 PRK07566 bacteriochlorophyll/c 100.0 6.9E-40 1.8E-44 261.9 12.9 261 16-288 18-285 (308) 31 KOG1380 consensus 100.0 2.6E-38 6.7E-43 252.3 5.8 278 17-308 92-373 (409) 32 pfam01040 UbiA UbiA prenyltran 100.0 1.8E-35 4.7E-40 235.0 16.3 245 37-290 4-250 (258) 33 TIGR01476 chlor_syn_BchG bacte 100.0 1.3E-33 3.4E-38 223.7 13.5 259 20-289 1-277 (295) 34 PRK12392 bacteriochlorophyll c 100.0 2E-34 5E-39 228.7 6.4 253 13-275 6-271 (331) 35 PRK12887 ubiA tocopherol phyty 100.0 1.7E-27 4.3E-32 186.5 13.0 265 15-287 10-289 (309) 36 PRK06080 1,4-dihydroxy-2-napht 99.9 3.5E-25 9E-30 172.4 19.3 280 15-305 5-299 (300) 37 TIGR02056 ChlG chlorophyll syn 99.9 5.4E-25 1.4E-29 171.3 8.9 263 17-290 14-288 (306) 38 PRK05951 ubiA prenyltransferas 99.9 6.6E-22 1.7E-26 152.5 16.1 278 17-307 2-294 (296) 39 PRK12872 ubiA prenyltransferas 99.9 3.4E-22 8.8E-27 154.2 13.8 224 73-301 54-284 (297) 40 PRK12324 phosphoribose diphosp 99.9 1.3E-21 3.3E-26 150.7 16.4 162 17-191 2-164 (288) 41 PRK13387 1,4-dihydroxy-2-napht 99.9 2E-21 5.2E-26 149.5 17.1 279 18-306 2-316 (317) 42 PRK13105 ubiA prenyltransferas 99.9 2.4E-20 6E-25 143.1 13.9 264 14-301 4-285 (291) 43 PRK07419 1,4-dihydroxy-2-napht 99.8 9.9E-19 2.5E-23 133.2 18.0 282 13-308 6-303 (304) 44 PRK08238 hypothetical protein; 99.8 2.9E-19 7.5E-24 136.4 13.4 169 15-196 189-358 (481) 45 PRK12875 ubiA prenyltransferas 99.8 4E-19 1E-23 135.6 13.6 258 24-303 10-276 (281) 46 COG1575 MenA 1,4-dihydroxy-2-n 99.8 1.1E-17 2.9E-22 126.7 17.7 282 14-306 3-302 (303) 47 PRK13595 ubiA prenyltransferas 99.8 1.6E-18 4E-23 131.9 10.7 273 11-309 8-296 (298) 48 TIGR02235 menA_cyano-plnt 1,4- 98.7 5.7E-07 1.5E-11 61.6 13.1 249 37-302 14-292 (293) 49 KOG4581 consensus 98.7 1.8E-08 4.5E-13 70.8 4.6 278 18-308 60-352 (359) 50 PRK13592 ubiA prenyltransferas 98.5 1.2E-05 3.1E-10 53.6 15.5 183 83-281 64-267 (299) 51 PRK13591 ubiA prenyltransferas 98.3 4.3E-07 1.1E-11 62.4 3.1 153 83-247 76-242 (304) 52 TIGR00751 menA 1,4-dihydroxy-2 96.2 0.097 2.5E-06 29.8 14.9 224 68-295 33-277 (286) 53 TIGR02123 TRAP_fused TRAP tran 81.5 3.8 9.7E-05 20.1 7.1 177 71-273 187-386 (681) 54 TIGR02840 spore_YtaF putative 75.9 0.47 1.2E-05 25.6 -1.0 46 105-150 126-176 (215) 55 KOG1419 consensus 73.7 3.6 9.3E-05 20.2 3.1 55 29-83 86-152 (654) 56 PRK04214 rbn ribonuclease BN/u 72.9 5 0.00013 19.4 3.7 49 68-124 107-155 (411) 57 TIGR03648 Na_symport_lg probab 71.4 4.6 0.00012 19.6 3.2 18 78-95 91-108 (552) 58 COG2271 UhpC Sugar phosphate p 65.2 9.7 0.00025 17.6 6.5 85 92-181 88-182 (448) 59 KOG2513 consensus 58.9 5.8 0.00015 19.0 1.7 10 39-48 182-191 (647) 60 KOG3976 consensus 54.0 7.1 0.00018 18.4 1.5 23 88-110 32-54 (247) 61 KOG1638 consensus 53.5 16 0.0004 16.4 11.2 118 96-219 43-184 (257) 62 TIGR01137 cysta_beta cystathio 46.1 6.6 0.00017 18.6 0.3 14 1-14 318-331 (527) 63 TIGR02230 ATPase_gene1 F0F1-AT 44.5 22 0.00055 15.5 4.8 45 32-86 48-92 (100) 64 TIGR00908 2A0305 ethanolamine 43.9 22 0.00056 15.4 4.2 10 100-109 262-271 (456) 65 PRK03545 sugar efflux transpor 39.8 26 0.00065 15.1 3.4 21 275-295 322-342 (390) 66 PRK12649 putative monovalent c 37.0 28 0.00072 14.8 6.7 17 79-95 353-369 (800) 67 TIGR01314 gntK_FGGY gluconate 36.5 5 0.00013 19.4 -1.5 35 7-41 302-347 (506) 68 PRK00625 shikimate kinase; Pro 36.5 5.3 0.00013 19.2 -1.4 21 87-107 101-121 (173) 69 TIGR00792 gph sugar (Glycoside 33.0 33 0.00084 14.4 10.2 37 114-150 87-127 (470) 70 COG4125 Predicted membrane pro 32.6 3.9 1E-04 20.0 -2.6 49 76-126 48-96 (149) 71 COG2119 Predicted membrane pro 30.0 37 0.00094 14.1 8.0 55 155-217 30-94 (190) 72 pfam04547 Anoctamin Calcium-ac 28.6 21 0.00054 15.5 0.6 36 14-53 4-39 (446) 73 pfam04923 Ninjurin Ninjurin. N 27.9 40 0.001 13.9 8.3 37 272-308 69-105 (116) 74 TIGR02278 PaaN-DH phenylacetic 25.5 18 0.00045 16.0 -0.2 14 198-211 572-585 (690) 75 pfam06609 TRI12 Fungal trichot 25.3 45 0.0011 13.6 8.4 20 211-230 291-310 (598) 76 TIGR00869 sec62 protein transl 23.6 31 0.00078 14.6 0.7 88 83-179 69-169 (259) 77 TIGR00876 tal_mycobact transal 23.6 26 0.00066 15.0 0.3 45 58-102 157-211 (350) 78 TIGR01388 rnd ribonuclease D; 22.1 44 0.0011 13.6 1.3 95 9-112 49-149 (374) 79 pfam00474 SSF Sodium:solute sy 21.5 53 0.0014 13.1 3.5 21 74-94 61-81 (406) 80 PRK01253 preprotein translocas 21.5 18 0.00047 15.9 -0.8 40 76-129 9-48 (54) 81 pfam05858 BIV_Env Bovine immun 20.7 55 0.0014 13.0 1.6 19 63-81 104-122 (548) 82 KOG4202 consensus 20.1 57 0.0015 12.9 1.5 27 81-107 22-55 (227) No 1 >TIGR01474 ubiA_proteo 4-hydroxybenzoate polyprenyl transferase; InterPro: IPR006370 These sequences are a family of integral membrane proteins that condense para-hydroxybenzoate with any of several polyprenyldiphosphates. Heterologous expression studies suggest that for, many but not all members, the activity seen (e.g. octaprenyltransferase in Escherichia coli) reflects available host isoprenyl pools rather than enzyme specificity. A fairly deep split by both clustering (UPGMA) and phylogenetics (NJ tree) separates this group (mostly Proteobacterial and mitochondrial), with several characterised members, from another group (mostly archaeal and Gram-positive bacterial) lacking characterised members IPR006371 from INTERPRO .; GO: 0004659 prenyltransferase activity, 0009058 biosynthetic process, 0016021 integral to membrane. Probab=100.00 E-value=0 Score=643.45 Aligned_cols=284 Identities=39% Similarity=0.680 Sum_probs=274.9 Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 78999986304853159989999999998521234334456421699999999999999899999964138877843423 Q gi|254780205|r 19 IAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLR 98 (310) Q Consensus 19 i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~R 98 (310) +++|.||+|.|||+|++||++||.||..+||..-+. ...+...++.+|.+|+++||||||++||++|||+|++||| T Consensus 1 l~~Y~~L~R~DkP~G~lLLl~P~~W~~~LAA~~~~~----s~~p~~~~L~~F~~G~~lMRgAGCviND~~DR~~D~~VeR 76 (291) T TIGR01474 1 LLPYAKLMRADKPIGTLLLLLPCLWSILLAAQAYDA----SGLPPLLLLALFTVGAILMRGAGCVINDIVDRDFDKQVER 76 (291) T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC T ss_conf 938999972557699999999999999998652067----8886089999999999998640434330462400433400 Q ss_pred CCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC Q ss_conf 43101001233210110013443100034555444443210035654443116655554332001010014566301114 Q gi|254780205|r 99 TRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWGA 178 (310) Q Consensus 99 T~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~~a 178 (310) ||+||||||+||+|||+.+...++.+|+.+++.+|+.|+.+|+.+++++++||++||+|++||++||+||+||++|||+| T Consensus 77 Tk~RPLasG~vs~~~A~~~~~~~~l~~l~~Ll~LN~~ti~Lgv~sL~lv~~YP~~KR~t~~PQ~~LGlaF~wGalmg~~A 156 (291) T TIGR01474 77 TKSRPLASGAVSVRQAILFLLVQLLVALGVLLQLNSLTILLGVASLALVAIYPFMKRITYWPQLVLGLAFGWGALMGWAA 156 (291) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 00378746631189999999999999999998755799999899999999801132015157999999984358877878 Q ss_pred CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHC--C Q ss_conf 575--432024688888742100357998887531000257203466542020-46665337899999999999835--3 Q gi|254780205|r 179 LHA--SFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQT-KLWLFILYGIFVLCFMVAFCLLT--V 253 (310) Q Consensus 179 v~g--~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~-~~~i~~~~~~~~~~~~~~~~~~~--~ 253 (310) ++| +++..++.||+++++||++|||+|||||||||+|+||||+|++||+|+ +.++..++..++.++..+|...+ . T Consensus 157 ~~G~~~l~~~a~~LY~a~i~Wt~~YDTiYA~~Dk~DD~kiGvkStA~~FG~~~Pk~~l~~l~~~~i~lL~~aG~~~~ll~ 236 (291) T TIGR01474 157 VQGVMDLSTAAWVLYLANILWTLGYDTIYAMQDKEDDLKIGVKSTALRFGDNTPKPWLGGLYALMILLLALAGLIAGLLL 236 (291) T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 61667876889999999999999986887532706467714289988740478178999999999999999999988875 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHH Q ss_conf 3799999999999999999980899979999--9987645999999999999986 Q gi|254780205|r 254 NFFAWIGLLIALFLTIKRIIALDISCSKQCC--SFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 254 ~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~--k~Fk~n~~~g~ii~~~iild~l 306 (310) ++.||.++.+...++.+|+..+|.+||++|+ |.|++|+++|.+++.|+++|.+ T Consensus 237 ~~~yy~~l~~a~~~l~~Qi~~l~~~~P~~C~yG~~F~~N~~vG~~~f~gi~l~~l 291 (291) T TIGR01474 237 GPVYYLGLAAAALLLIRQIATLDIRDPENCLYGKLFKANNYVGLLLFAGIVLGLL 291 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHC T ss_conf 4899999999999999998888516781016877865020899999999998429 No 2 >PRK12878 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=607.88 Aligned_cols=296 Identities=47% Similarity=0.830 Sum_probs=282.7 Q ss_pred HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 01355541054677899998630485315998999999999852123433445642169999999999999989999996 Q gi|254780205|r 6 NFKWVRDCIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWN 85 (310) Q Consensus 6 ~~~~~~~~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~N 85 (310) -..|+ ||.+|++++||+||+|+|||+|++|++|||+||.++++...+.. ..+.+..+.+|.+|+++||||||++| T Consensus 18 ~~~wv-~~~lP~~~~pY~~L~RldkPiG~~LL~~P~~w~l~laa~~~~~~----~~~~~~~l~lf~~G~~~mRsAGCviN 92 (314) T PRK12878 18 SGNWV-DRRLPPWLRPYARLARWDRPIGWWLLLWPCWWSAALAAGAAADL----GLPLLWHLFLFFIGAIAMRGAGCTWN 92 (314) T ss_pred CCCCH-HHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC----CCCHHHHHHHHHHHHHHHHCCCCHHH T ss_conf 89744-76288757899999843661989999999999999986156766----66279999999999999931201999 Q ss_pred HHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH Q ss_conf 41388778434234310100123321011001344310003455544444321003565444311665555433200101 Q gi|254780205|r 86 DLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLG 165 (310) Q Consensus 86 d~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG 165 (310) |++|||+|+||||||+||||||+||++||+++..+++++++.+++++|+.++.+++.+++++++||++||+|++||+++| T Consensus 93 Di~DrdiD~~v~RTk~RPLasG~iS~~~A~~f~~~l~~~~~~ll~~ln~~~~~l~~~~l~lv~iYP~~KR~t~~PQ~~LG 172 (314) T PRK12878 93 DIVDRDLDAKVARTRSRPLPSGQVSRKQAKVFMVLQALVGLAVLLQFNRFAIALGIASLAIVAAYPFMKRITWWPQFFLG 172 (314) T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH T ss_conf 88986004256445678876677799999999999999999999998599999999999999999999862103799999 Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH Q ss_conf 00145663011145754320246888887421003579988875310002572034665420204666533789999999 Q gi|254780205|r 166 IGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFM 245 (310) Q Consensus 166 ~~~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~ 245 (310) +++++|+++||+|++|++++++++||+++++||++|||+||+||+|||+|+|+||+|+++|++++.++..++.++..++. T Consensus 173 l~f~~g~l~gw~Av~g~l~~~~~lL~~a~~~Wt~~yDtiYA~qD~~DD~k~GVkStav~fG~~~~~~i~~~~~l~~~ll~ 252 (314) T PRK12878 173 LAFSWGALMGWAATFGSLSWAAVLLYAGSIAWTIGYDTIYAHQDKEDDALIGVKSTARLFGEHTKTWLVLLYGLAVVLMG 252 (314) T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH T ss_conf 99730588899971688766999999999999999999997314765987699731578543729999999999999999 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999835337999999999999999999808999799999987645999999999999986 Q gi|254780205|r 246 VAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) ..++..+.+.+|+.++.+...++.+|+..++.+|+++|+++||+|+++|.++++++++|++ T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~~q~~~~~~~~~~~~~~~Fk~N~~~G~iif~gi~~~~L 313 (314) T PRK12878 253 AAFALARAPLLALLGLLAAAAHLAWQIVRLDIDDPAQCLRLFKSNRDAGLLIFAGLVVGGL 313 (314) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999985229999999999999999999817998899999999819999999999998543 No 3 >PRK12894 consensus Probab=100.00 E-value=0 Score=566.82 Aligned_cols=280 Identities=27% Similarity=0.453 Sum_probs=268.6 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) .++||+||+|+|||+|++|++|||+||.++|+.+.+ ..+.+.++.+|+++||||||++||++|||+|+||| T Consensus 3 ~w~~y~~L~Rl~kPiG~~Lll~P~~~~l~lA~~g~p---------~~~ll~lf~~G~~lmRsagc~iNdi~Dr~iD~~v~ 73 (282) T PRK12894 3 PWNAYVRLLRLNKPIGILLLWYPTAWALWMANQGFP---------SIDLLMIFLLGTVFMRSAGCVINDIADRHIDRHVA 73 (282) T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 729999999330379899999999999998657898---------78999999999999998577998289871588886 Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC Q ss_conf 34310100123321011001344310003455544444321003565444311665555433200101001456630111 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWG 177 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~~ 177 (310) |||+||+|||++|++||+.+..++..+++.++..+|..|+.+++.+.+++++||++||+|++||+++|+++++|+++||+ T Consensus 74 RTk~RPlasG~vs~~~A~~~~~~l~~~~~~~l~~l~~~~~~l~~~~~~~~~~YP~~KR~t~~pq~~LGl~f~~~~l~~~~ 153 (282) T PRK12894 74 RTQFRPLTSGEVSLSEAFILLFILLCASLLLLLKLPINCFYFAVISVLITFLYPFCKRFLNAPQLILGLAFSMGIPMAFI 153 (282) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 76677555678659899999999999999999998599999999999999999999860203469999999989999999 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH Q ss_conf 45754320246888887421003579988875310002572034665420204666533789999999999983533799 Q gi|254780205|r 178 ALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFA 257 (310) Q Consensus 178 av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 257 (310) |++|+++.+++.+++++++||++|||+||+||+|||+|.|+||+|++||++++.++..++.++..++...+...+.+++| T Consensus 154 a~~~~~~~~~~~L~~~~~~Wt~~yDtiYA~qD~~dD~k~GikS~ai~fG~~~~~~i~~~~~~~~~l~~~~g~~~~~~~~~ 233 (282) T PRK12894 154 ASGKNLNSDFIVLFLINFSWIIAYDTMYAMTDKADDLKIGVKSTAIYFASYDRLIIALLLIFLHSLWLVWAINKNAEWFF 233 (282) T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH T ss_conf 97189988999999999999999999999815852987399751787686648999999999999999999985550899 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999999999999808999799999987645999999999999986 Q gi|254780205|r 258 WIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 258 ~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) |.++.....++.||++.++.+||++|+|+||+|+++|.++|++++++.+ T Consensus 234 yl~v~~~a~~l~yq~~~i~~~~p~~c~~aF~~N~~~G~iiF~gi~L~~~ 282 (282) T PRK12894 234 YLLWCTAAGILTYQLKLIYARIPKNCFKAFLVSGYYGLVMWFAVGLALI 282 (282) T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC T ss_conf 9999999999999999916999899999999801999999999999749 No 4 >PRK12870 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=560.27 Aligned_cols=287 Identities=30% Similarity=0.484 Sum_probs=272.8 Q ss_pred HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 41054677899998630485315998999999999852123433445642169999999999999989999996413887 Q gi|254780205|r 12 DCIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD 91 (310) Q Consensus 12 ~~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d 91 (310) ||..|.+++||+||+|+|||+|++|++|||+||+++|+.+.++ ...+.++.+|+++||||||++||++||| T Consensus 2 ~~~~~p~w~~y~~L~R~~kP~g~~LL~~p~~~~l~la~~g~p~---------~~~~~~~~~G~~~~rsagc~iNdi~Drd 72 (289) T PRK12870 2 SRTPEPTWLTIIRLLRWDKPAGRLILMIPALWAVFLAARGLPP---------LPLVGIIILGALATSAAGCVVNDLWDRD 72 (289) T ss_pred CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999987899999974467675899999899999997578998---------9999999999999999986999899981 Q ss_pred CCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 78434234310100123321011001344310003455544444321003565444311665555433200101001456 Q gi|254780205|r 92 IDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGG 171 (310) Q Consensus 92 iD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~ 171 (310) +|++|||||+||+|+|++|++||++++.++..+++.+++++|+.++.+++.+++++++||++||+|++||+++|+++++| T Consensus 73 iD~~v~RT~~RPl~~G~is~~~A~~~~~~l~~~~~~ll~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~pq~~lG~~~~~~ 152 (289) T PRK12870 73 IDPHVERTRGRPLASRRLSVKVGIVIALVALLCAAGLAFFLNPLSFWLCVAAVPVIFLYPLAKRVFPVPQLVLAAAWGFA 152 (289) T ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCH T ss_conf 45788888887676777579999999999999999999999999999999999889976511022677740567541003 Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 63011145754320246888887421003579988875310002572034665420204666533789999999999983 Q gi|254780205|r 172 VFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLL 251 (310) Q Consensus 172 ~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~ 251 (310) +++||+|++|+++.++++|+++.++||++|||+||+||+|||+|+|+||+|+++|++++.++..++.++.+++...++.. T Consensus 153 ~l~gw~av~g~l~~~~~lL~~~~~~Wt~~~DtiYA~qD~~dD~k~Gv~S~av~~G~~~~~~i~~~~~~~~~~l~~~g~~~ 232 (289) T PRK12870 153 VLISWSAVTGHLEVATWLLWGATVFWTLGFDTVYAMSDREDDLRIGINSSAIFFGRYAPEAIGLFFALTVLFLAILGVLL 232 (289) T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 77899994699876899999999999999989998851753987699877505050069999999999999999999998 Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 5337999999999999999999808-9997999999876459999999999999865 Q gi|254780205|r 252 TVNFFAWIGLLIALFLTIKRIIALD-ISCSKQCCSFFHSAGVVGILILICLIISLFL 307 (310) Q Consensus 252 ~~~~~~~~~~l~~~~~l~~~i~~~~-~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL 307 (310) +.+..||.++.+...++.+|+..++ .++++.|.++|++|+++|.++++++++|+++ T Consensus 233 ~l~~~y~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~F~~N~~~g~llf~gi~~d~ll 289 (289) T PRK12870 233 ELHPPFWLGLALATVLWARQYRRLQAELPPAAYGQLFLQNVWIGFILLAGMILGSLL 289 (289) T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 531999999999999999999996279986999999998399999999999998749 No 5 >PRK12848 ubiA 4-hydroxybenzoate octaprenyltransferase; Reviewed Probab=100.00 E-value=0 Score=555.49 Aligned_cols=282 Identities=33% Similarity=0.541 Sum_probs=271.1 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) +|+|+++|+||+|+|||+|++|+++||+||+++|+.+.+ ....+.++.+|++++|||||++||++|||+|+ T Consensus 1 L~~k~~~Y~~L~Rl~kP~g~~Ll~~p~~~g~~la~~g~~---------~~~~l~~~~~g~~~~r~agc~~Nd~~DrdiD~ 71 (282) T PRK12848 1 LQDRLLAYARLMRLDKPIGTLLLLWPTLWALWLAADGIP---------DLWVLVIFVLGVFLMRAAGCVINDYADRDFDG 71 (282) T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 927799999998426861159999999999998568999---------88999999999999999998999998872325 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 34234310100123321011001344310003455544444321003565444311665555433200101001456630 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFV 174 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 174 (310) +|+|||+||+|+|++|++||+.+++.++++++.+++++|+.++.+++.+++++++||++||+|++||+++|+++++|+++ T Consensus 72 ~~~RTk~RPl~~G~is~~~A~~~~~~~~~~~~~~l~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 151 (282) T PRK12848 72 HVKRTKNRPLASGAVSEKEALALFVVLVLVAFLLVLTLNTLTIWLSVAALALAFIYPFMKRYTHLPQVVLGAAFGWGIPM 151 (282) T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 89888999887772679999999999999999999999999999999999999888765764137502999998756666 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11145754320246888887421003579988875310002572034665420204666533789999999999983533 Q gi|254780205|r 175 GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVN 254 (310) Q Consensus 175 g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310) ||+|++|+++.+++++|++.++||++|||+||+||+|||+|+|+||+|+++|++++..+..++..+..++...++..+.+ T Consensus 152 g~~a~~g~~~~~~~~L~~~~~~Wt~~~d~~yA~~D~~dD~~~Gv~S~av~~G~~~~~~i~~~~~~~~~l~~~~g~~~~~~ 231 (282) T PRK12848 152 AFAAVQGSVPLEAWLLFLANILWTVAYDTQYAMVDRDDDLKIGIKSTAILFGRYDKLIIGLLQLATLALLALAGWLLGLG 231 (282) T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 89997499988999999999999999889999705653976699964588650018999999999999999999997373 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 799999999999999999980899979999998764599999999999998 Q gi|254780205|r 255 FFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISL 305 (310) Q Consensus 255 ~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310) +.|+.++.+...++.||+..++.+|+++|+++||+|+++|.++++++++|+ T Consensus 232 ~~y~~~~~~~~~~l~~q~~~v~~~d~~~~~~~F~~N~~~g~ilf~gi~ldy 282 (282) T PRK12848 232 WGYYWGLLVAAALFVYQQKLIRDREREACFKAFLNNNWVGLVLFAGIAASY 282 (282) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999999999999980699889999999973999999999999419 No 6 >PRK12877 consensus Probab=100.00 E-value=0 Score=552.46 Aligned_cols=283 Identities=34% Similarity=0.617 Sum_probs=271.3 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 67789999863048531599899999999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) ||+++|+||+|+|||+|++|++|||+||+++|+.+. .+..+.+.++.+|++++|||||++||++|||+|++| T Consensus 1 sk~~~y~~L~Rl~kP~g~~Ll~~p~~~g~~lA~~~~--------~~~~~l~~l~~~G~~l~rsagc~iNd~~D~diD~~v 72 (283) T PRK12877 1 SKFLLYFKLMRLHSPVIYLLVFFPALFGILLASPSL--------LELLYLLPLFILGSITMRSAGCIINDIFDRKIDKHV 72 (283) T ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 972799999753660668999999999999816789--------855999999999999999999899989986036787 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 23431010012332101100134431000345554444432100356544431166555543320010100145663011 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) ||||+||+|+|++|++||+.+...++.+++.+++++|+.|+.+++.+.++.++||++||+|++||+++|+++++|+++|| T Consensus 73 ~RT~~RPl~~G~is~~~A~~~~~~~~~~~~~~l~~ln~~~~~l~~~~~~~~~~Yp~~KR~t~~pq~~lG~~~~~~~l~g~ 152 (283) T PRK12877 73 ARTKNRPLASGALSVSQALKILFILLIIALVILLLTNKTAIYLGIFAMIMIVLYPLMKRIFYWPQLFLGFTFNLGVLIGY 152 (283) T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHCCHHHHH T ss_conf 75778766778977889999999999999999985349999999998682442141211143338998787642213549 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHH Q ss_conf 14575432024688888742100357998887531000257203466542020466653378999999999998353379 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFF 256 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 256 (310) +|++|+++.++++++++.++||++|||+||+||+|||+|+|+||+|+++|++++.++..++..+..++...++..+.+.. T Consensus 153 ~av~~~~~~~~~ll~~~~~~W~~~~dtiYA~qD~~dD~k~Gv~S~av~~G~~~~~~i~~~~~~~~~ll~~~~~~~~~~~~ 232 (283) T PRK12877 153 AMVQNKLDIASILMYIGCIFWTIGYDTIYAAQDKKDDKKLGVKSTAIYFGNKIKLWLYRLYIIFILMWISAGIIANLHNI 232 (283) T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 87189878799999999999999999999842257699749987784127526999999999999999999999874499 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999999999998089997999999876459999999999999865 Q gi|254780205|r 257 AWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFL 307 (310) Q Consensus 257 ~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL 307 (310) |+++..+...++.+|+..++.+|+++|+++||+|+++|.++++++++|+++ T Consensus 233 y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~N~~~g~~if~gi~l~~li 283 (283) T PRK12877 233 FYLAILAAAILFYYQYATLDFDNPANCMYRFKANNYVGLLLFLGFCLGRIV 283 (283) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999999999998589997999999998399999999999998739 No 7 >PRK12847 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=547.76 Aligned_cols=283 Identities=34% Similarity=0.600 Sum_probs=270.3 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 05467789999863048531599899999999985212343344564216999999999999998999999641388778 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDID 93 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD 93 (310) .|.+|+++|+||+|+|||+|++|+++||+||+++|+.+. .+..+.+.++.+|++++|||||++||++|||+| T Consensus 2 ~~~~k~~~y~~L~rl~kP~g~~Ll~~p~~~g~~la~~~~--------~~~~~~~~l~~ig~~l~r~ag~~iNd~~DrdiD 73 (284) T PRK12847 2 DILQKFNAYFKLMRLHKPVGILLVFFPTLFGLLLASHSL--------LPDISLLVLFIIGSILMRSAGCIINDIFDRKID 73 (284) T ss_pred CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 378999999999732674448999999999999836888--------850999999999999999999899989897247 Q ss_pred CCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 43423431010012332101100134431000345554444432100356544431166555543320010100145663 Q gi|254780205|r 94 SQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVF 173 (310) Q Consensus 94 ~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l 173 (310) ++|||||+||+|+|++|++||+.++.+++++++.+++++|..|+.+++.+.+++++||++||+|++||+++|+++++|++ T Consensus 74 ~~~~RTk~RPl~~G~is~~~A~~~~~~l~~~~~~~l~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~pq~ilG~~~~~~~l 153 (284) T PRK12847 74 KHVARTKNRPLASGALSVKQALILLFILLLIALVILLFLNKYTIYLSFIAVILIVLYPLMKRFFYWPQLFLGFTFNSGIL 153 (284) T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH T ss_conf 89879998764677767899999999999999999832779999999999999999998886301434787777652488 Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 01114575432024688888742100357998887531000257203466542020466653378999999999998353 Q gi|254780205|r 174 VGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTV 253 (310) Q Consensus 174 ~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~ 253 (310) +||+|++|+++.++++++++.++||++|||+||+||+|||+|+|+||+|+.+|++++.++..++.++..++...++..+. T Consensus 154 ~g~~a~~~~~~~~~~~L~~~~~~Wt~~~d~~yA~~D~~DD~k~Gv~S~av~~G~~~~~~~~~~~~~~~~ll~~~~~~~~~ 233 (284) T PRK12847 154 MAYAAVQNQLDIEAILLYIGCIFWTIGYDTIYAAQDKKDDLKIGVKSTAIYFGNKTRKWILRLYIISLILWLILGIKSSL 233 (284) T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999739988789999999999999998999997154298769965643626430999999999999999999999871 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 379999999999999999998089997999999876459999999999999 Q gi|254780205|r 254 NFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIIS 304 (310) Q Consensus 254 ~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild 304 (310) +..||.+..+...++.+|+..++.+|+++|+++||+|+++|++++++++++ T Consensus 234 ~~~yy~~~~~~~~~l~~~~~~i~~~~~~~~~~~F~~N~~~g~lif~giilG 284 (284) T PRK12847 234 NNIFYLAILIAAGIFYYQYKTLDFDNPANCMYRFKANHYVGLLLFLGAVLG 284 (284) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 699999999999999999999289998999999997199999999999959 No 8 >PRK12873 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=548.95 Aligned_cols=284 Identities=29% Similarity=0.474 Sum_probs=260.4 Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877 Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310) Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310) .....|++||.||+|+|||+|++|++|||+||+++++.+. +....+.++.+|+++||||||++||++|||| T Consensus 4 ~~~~~kl~~y~~L~RldkP~G~~LLl~P~~~~l~la~~~~---------p~~~~l~lf~~G~~~mRsagC~iNDi~Drdi 74 (297) T PRK12873 4 KSRSIKLSPWFELLRWNKPTGRLILLIPAGWSLWLTPSAP---------PSLLLLLLIILGGLAVSGAGCIANDLWDRRI 74 (297) T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 5277758999999811136989999998999999856799---------9789999999999999875539987899662 Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH Q ss_conf 843423431010012332101100134431000345554444----4321003565444311665555433200101001 Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNP----FVICVGFALLFISLLYPFSKRFILCPQVVLGIGF 168 (310) Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~----~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~ 168 (310) |+||||||+||+|||++|++||+.+..++..+++.+++.+|. .++.+++.+++++++||++||+|++||+++|+++ T Consensus 75 D~~v~RTk~RPLasG~vS~~~A~~~~~~l~~~~~~ll~~l~~~~~~~~l~la~~~~~~i~~YPl~KR~t~~PQ~~LG~~f 154 (297) T PRK12873 75 DRKVERTKNRPLARGKISLKTAYSLLIVLLLLSLFVVLSLPQPSRNLCLSLAFLALPPILIYPSAKRWFAYPQAILALCW 154 (297) T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH T ss_conf 13654256775235785386899999999999999999965048999999999999999998776553104589999999 Q ss_pred HHHHHHCCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH Q ss_conf 4566301114575432024688--88874210035799888753100025720346654202046665337899999999 Q gi|254780205|r 169 AGGVFVGWGALHASFSWPAFFL--CIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMV 246 (310) Q Consensus 169 ~~~~l~g~~av~g~~~~~~~~L--~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~ 246 (310) ++++++||+|++|+++.++.++ |+++++||++|||+||+||+|||+|.|+||+|++||++++..+..++.++.+++.. T Consensus 155 ~~~~l~~waav~g~l~~~~~ll~~~l~~~~Wt~~yDtiYA~qD~~dD~k~GvkS~av~fG~~~~~~i~~~~~l~~~ll~~ 234 (297) T PRK12873 155 GFAVLIPWAAAEGSLNGGWPLLFCWLATLLWTFGFDTVYAMADRRDDAKIGLNSSALSLGSNALKTVQICYFLTSIFLAL 234 (297) T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 98899999998088871599999999999999999999997249879976986505776504199999999999999999 Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99983533799999999999999999980899--979999998764599999999999998 Q gi|254780205|r 247 AFCLLTVNFFAWIGLLIALFLTIKRIIALDIS--CSKQCCSFFHSAGVVGILILICLIISL 305 (310) Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~--~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310) .++..+.+..||+..++....+.+|+..++.+ +++.|+++||+|+++|.++++++++|+ T Consensus 235 ~g~~~~~~~~yy~~~li~~~~~~~~~~~l~~~~~~~~~~~~~F~~N~~~G~llf~Givl~k 295 (297) T PRK12873 235 AAFIAQVGFIFWPFWLIASIGMQRDILKLFPEKQSIKTIGNHFSNQVILGSLLLLGLILAR 295 (297) T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9998618799999999999999999999616676768999999987999999999999618 No 9 >PRK12888 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=531.20 Aligned_cols=286 Identities=22% Similarity=0.302 Sum_probs=269.3 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 05467789999863048531599899999999985212343344564216999999999999998999999641388778 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDID 93 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD 93 (310) -.|+|+|+|+||+|+|||++.+++.||++|..++++.+. +.+..+.++.+|++.||||||++||++||||| T Consensus 22 ~~p~klr~yl~Lir~~h~if~lpf~~~~~~~a~~a~~g~---------p~~~~l~~~~lg~v~~RsAgc~iNdi~DrdiD 92 (313) T PRK12888 22 RQPGRVRAFLRLVAIEHSVFALPFAYIAALTAMFAADRS---------VHWGDLLLVTVAMVGARTFAMAANRIIDREID 92 (313) T ss_pred CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 984779999999985480999999999999999861799---------99999999999999999999999977443425 Q ss_pred CCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 43423431010012332101100134431000345554444432100356544431166555543320010100145663 Q gi|254780205|r 94 SQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVF 173 (310) Q Consensus 94 ~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l 173 (310) ++|+|||+||+|+|++|++||+.+.+.++.+++..+.++|++|+.+++.++.+.++||++||+|++||+++|++++++++ T Consensus 93 ~~v~RTk~RPL~sG~is~~~A~~~~~~~~~~~~~~~~~ln~l~~~ls~~~~~~~~~Yp~~KRfT~~pq~~LG~a~~~~~l 172 (313) T PRK12888 93 ARNPRTAGRELVTGAVSVRTAWTGALVALAVFLGAAALLNPLCLALAPLAVAPLVVYPYAKRFTNFPHAVLGLAQAVGPV 172 (313) T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 67955578876568867999999999999999999999989999999999999999999988765457999999998788 Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHC Q ss_conf 011145754320246888887421003579988875310002572034665420204666-5337899999999999835 Q gi|254780205|r 174 VGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGIFVLCFMVAFCLLT 252 (310) Q Consensus 174 ~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~~~~~~~~~~~~~~ 252 (310) +||+|++|++++++++|++++++||.+|||+||+||+|||+|.|+||+|++||++....+ ..++.++..++...+...+ T Consensus 173 ~~w~Av~g~~~~~~~lL~~~~~~W~~~fDtiYA~qD~edD~k~Gi~S~a~~fG~~~~l~i~~~~~~~~~~ll~~~g~~~~ 252 (313) T PRK12888 173 GAWIAVTGTWSWPAVLLGLAVGLWIGGFDLIYACQDAEVDRRIGVRSVPARFGVRAALWGSRVAHVVTFALFVWFGLATG 252 (313) T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999728887899999999999999998987871653298749985278868502799999999999999999999973 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH Q ss_conf 33799999999999999999980899979999998-764599999999999998652 Q gi|254780205|r 253 VNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFF-HSAGVVGILILICLIISLFLD 308 (310) Q Consensus 253 ~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~F-k~n~~~g~ii~~~iild~lL~ 308 (310) ++++||+++++...++.||+..++.+|+++|.++| +.|+++|++++.++++|.+++ T Consensus 253 l~~~y~~g~~~~~~ll~yq~~li~~~d~~~~~~aFF~~N~~vglilf~~~l~d~llr 309 (313) T PRK12888 253 AGALWWAGLLLTAVAFAYEHRIVSPTDLSRVNRAFFTANGFIGIALFGFALGDLLVR 309 (313) T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 809999999999999999999927888899999999850399999999999999975 No 10 >KOG1381 consensus Probab=100.00 E-value=0 Score=520.23 Aligned_cols=290 Identities=34% Similarity=0.525 Sum_probs=278.6 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 05467789999863048531599899999999985212343344564216999999999999998999999641388778 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDID 93 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD 93 (310) .-|.++|||.||||++||+|+||++|||.|++.+++ .....+...++.+|..|+++||||||+|||.+|||+| T Consensus 59 ~~p~r~~pYaqLmRldkPiGTwLLywPCtWSIamaA-------dag~~p~~~mL~LFG~GAllMRgAGCtINDlwDkdlD 131 (353) T KOG1381 59 SSPKRWKPYAQLMRLDKPIGTWLLYWPCTWSIAMAA-------DAGLLPSIKMLALFGVGALLMRGAGCTINDLWDKDLD 131 (353) T ss_pred CCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCC-------CCCCCCHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHH T ss_conf 387223259999714787610354320177888606-------9876502689998550087710688540265531466 Q ss_pred CCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 43423431010012332101100134431000345554444432100356544431166555543320010100145663 Q gi|254780205|r 94 SQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVF 173 (310) Q Consensus 94 ~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l 173 (310) +||||||.|||+||++|+++|+.|...+..+|+.++.++|+.++.++..+...++.||.+||+|+|||+++|++|+||.+ T Consensus 132 ~KVeRtklRPlAsG~ls~~qaI~fL~~ql~~gLgiLlqLn~ysi~lg~~sl~~v~~ypl~kr~TY~pq~vLgltfnwGAl 211 (353) T KOG1381 132 AKVERTKLRPLASGSLSPRQAIGFLGAQLSLGLGILLQLNWYSIALGASSLALVITYPLMKRFTYWPQLVLGLTFNWGAL 211 (353) T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEHHHHCCHHHHHHHHHHCCHHHH T ss_conf 66765323533358756557789999999876799972668889852245240777412220232078897622133545 Q ss_pred HCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 011145754320-2468888874210035799888753100025720346654202046665337899999999999835 Q gi|254780205|r 174 VGWGALHASFSW-PAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLT 252 (310) Q Consensus 174 ~g~~av~g~~~~-~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~ 252 (310) +||.|+.|+... .++-||+..+.||+.|||||||||++||.|+|+||+|.+||+||+.++..+...++..+...|+..+ T Consensus 212 lGw~A~~g~~~~s~~~plYls~v~Wtl~YDTIYAHQDK~dDvk~gvkSTALrfG~nTK~wl~gf~a~~ia~La~aG~~s~ 291 (353) T KOG1381 212 LGWCALKGSLSPSAVLPLYLSGVCWTLIYDTIYAHQDKRDDVKIGVKSTALRFGDNTKPWLSGFGAAQIASLAAAGIASD 291 (353) T ss_pred HCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 26464427647024268998413233212346650341453674214655440778716776403989999987443058 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 3379999999999999999998089997999999876459999999999999865219 Q gi|254780205|r 253 VNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLDQF 310 (310) Q Consensus 253 ~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~~~ 310 (310) .++.||..+......+..|++.+|.+||++|+|.|++|.+.|.+++.++++|.++|.| T Consensus 292 q~~pyy~~lg~~~~~L~~~i~~vdiDnp~dC~k~f~sN~ntGli~~~~i~~d~llk~~ 349 (353) T KOG1381 292 QTWPYYAALGAVAARLGSQIYKVDIDNPSDCWKKFKSNSNTGLILFSGIVLDTLLKSF 349 (353) T ss_pred CCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 8851788899999998764034446881889999886576248898999999999886 No 11 >PRK13106 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=501.63 Aligned_cols=278 Identities=20% Similarity=0.199 Sum_probs=256.3 Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 46778999986304853159989999999998521234334456421699999999999999899999964138877843 Q gi|254780205|r 16 GSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQ 95 (310) Q Consensus 16 ~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~ 95 (310) ++|+|+|+||+|+|||+..+ .++.+|.++|+.+.+ ....+.++.+|++.||||||++||++|||+|++ T Consensus 12 ~~K~~~y~~l~r~~~~if~L---p~a~~~~~lA~~g~p---------~~~~l~~~~lg~~~~Rsagc~iNdi~Dr~iD~~ 79 (299) T PRK13106 12 RSKLYIYLRFLRIEQTFFSL---PMAYMGAFLAIRGIP---------PIRTLILIFLALFFLRTAGMTNDNLADREIDAK 79 (299) T ss_pred HHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 77999999999982499999---999999999728999---------899999999999999999989998605174468 Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 42343101001233210110013443100034555444443210035654443116655554332001010014566301 Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVG 175 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g 175 (310) |||||+||+|||++|++||+.+...++.+++..++++|+.|+.+++.+..++++||++||+|++||+++|+++++++++| T Consensus 80 v~RT~~RPL~sG~is~~~A~~~~~~~~~~~~~~~~~ln~~~~~ls~~~~~~~~~YP~~KRft~~pq~~LG~~~~~~~~~~ 159 (299) T PRK13106 80 NPRTRTRPLVTGAITVREAWLLIAAGLIGYFASAYLLNRYALLLSPIVALIAMSYPYMKRYTAFANYHLASVQGLAVFSG 159 (299) T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH T ss_conf 96668888766887999999999999999999999974999999999999999999988730133699999999789999 Q ss_pred CCCCCCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH Q ss_conf 11457543--------2024688888742100357998887531000257203466542020466653378999999999 Q gi|254780205|r 176 WGALHASF--------SWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVA 247 (310) Q Consensus 176 ~~av~g~~--------~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~ 247 (310) |.|++|.. ...+|+++.++++||.+|||+||+||+|||+|.|+||+|++||+++..++..++.++..++... T Consensus 160 ~~a~~g~~~~~~~~~~~~~~~ll~~a~~~W~~~yDtiYA~qD~~dD~~~Gi~S~a~~fG~~~~~~~~~~~~~~~~ll~~~ 239 (299) T PRK13106 160 AVASLGLEATSLTQVLRSVPWLFVIATILWAVGFDLYNHIPDADFDRKMGLHSFAVLLGNKALAFAGLNQLASVLLAIAG 239 (299) T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99985320012354667899999999999999985988737822327659870288885779999999999999999999 Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9983533799999999999999999980899979999998764599999999999998652 Q gi|254780205|r 248 FCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) +...+.+++|+.+..+...++.||+...+ +++|.|.|++|+++|+++++++++|+++. T Consensus 240 g~~~~lg~~~~~~~~i~~~~~~yq~~l~~---~~d~~~aF~~N~~iGlilf~gi~ld~llg 297 (299) T PRK13106 240 DIAYGLGPIAYAATVLHGLIMAYAYYLAS---KGNFGRAFYYNIYSSIVLGLGIIIDVLLG 297 (299) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHCCHHHHHHHHHHHHHHHHC T ss_conf 99986279999999999999999999589---53099999861899999999999999818 No 12 >PRK12886 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=486.81 Aligned_cols=284 Identities=23% Similarity=0.354 Sum_probs=258.4 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) +-+|+|.|+||+|++|+ .+...++++|+++|+.+.++ ...+.++.+|++.+|+|||++||++|||+|+ T Consensus 4 ~~~kik~yl~l~k~~~t---~~~l~~a~~g~~lA~~g~p~---------~~~l~~~~lg~~~~rsag~~iN~i~D~diD~ 71 (291) T PRK12886 4 FFTKLKVFLEMIKFSHT---LFALPFAGIGAVLAALGTPG---------ASQLDWILMAMVGARTAAMGFNRIIDAEIDA 71 (291) T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 89999999999705149---99999999999997578998---------9999999999999999999999898762046 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 34234310100123321011001344310003455544444321003565444311665555433200101001456630 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFV 174 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 174 (310) +|||||+||+|+|++|++||+++.+.+..+++..++++|++|+.+++.+++++++||++||+|++||+++|+++++||++ T Consensus 72 ~~~RT~~RPL~sG~is~~~a~~~~~~~~~~~~~~~~~ln~l~~~l~~~~~~~~~~Yp~~KR~t~~~~~vlG~~~~~~pl~ 151 (291) T PRK12886 72 KNPRTAGRAIPAGLISKGSALLFIVLSSLLFLFAAWFLNPLCLLLSPPALFFLLLYSYCKRFTALAHVVLGFCLALAPLG 151 (291) T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH T ss_conf 89666788764689699999999999999999999998799999999999999999999865631089999998636889 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHCC Q ss_conf 11145754320246888887421003579988875310002572034665420204666-53378999999999998353 Q gi|254780205|r 175 GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGIFVLCFMVAFCLLTV 253 (310) Q Consensus 175 g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~~~~~~~~~~~~~~~ 253 (310) ||+|++|+++.++++++++.++||.+|||+||+||+|||+|+|+||+|+++|++....+ ..++.+++.++...+...+. T Consensus 152 gw~Av~g~~~~~~~lL~~~~~~W~~~~d~~ya~~D~edD~k~Gv~Slpv~fG~~~~~~i~~~~~~~~v~~~~~~~~~~~l 231 (291) T PRK12886 152 AWIAIRGTIELPAILLGLGVLFWVAGFDILYALQDLEFDRKEGLHSIPAKLGVNGSLWIARVFHLLMIGFLFALGISAGL 231 (291) T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99998189988999999999999999989999970762987699743688572858999999999999999999999850 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 37999999999999999999808999799999-9876459999999999999865219 Q gi|254780205|r 254 NFFAWIGLLIALFLTIKRIIALDISCSKQCCS-FFHSAGVVGILILICLIISLFLDQF 310 (310) Q Consensus 254 ~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k-~Fk~n~~~g~ii~~~iild~lL~~~ 310 (310) +++|+.+..+....+.||+..++++|+++|.+ +|+.|+++|.++++++++|.+.+.+ T Consensus 232 g~~y~~~~~~~~~~l~y~~~l~~~~d~~~~~~afF~~N~~ig~~lf~~illD~l~~~~ 289 (291) T PRK12886 232 GPWFLAGLAVTGYMLLYEHWLLRGGDLTRLDAAFFQMNGYISVTLFAATLFDRLFYFL 289 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 5999999999999999999990789869999999998499999999999999999864 No 13 >PRK12895 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=487.28 Aligned_cols=279 Identities=20% Similarity=0.326 Sum_probs=243.5 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 7789999863048531599899999-999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCL-WSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~-~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) |+|+|+|+.|++|.+. .+|-. .|.++|+.+. +....+.++.+|++.||||||++||++|||+|++| T Consensus 2 ~~~~~~~~i~~~htiF----alPfa~~~~~~A~~~~---------p~~~~l~l~~lg~v~~Rsagc~iNdi~DrdiD~~v 68 (286) T PRK12895 2 NFRDIVDYIKLEHTVF----DLPFILAGYVIAAGHY---------IHPIKILLILIAAVSARTSAMSINRIEGLRYDMIN 68 (286) T ss_pred CHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 7899999999976998----8999999999977999---------98899999999999998999899987060434579 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 23431010012332101100134431000345554444432100356544431166555543320010100145663011 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) ||||+||+|+|++|++||+.+..+++.+++.+++++|+.|+.+++.+++++++||++||+|++||+++|+++++++++|| T Consensus 69 ~RTk~RpL~sG~is~~eA~~~~~~~~~~~~~~~~~ln~~~~~ls~~al~l~~~YP~~KRft~~pq~~LG~~f~~g~l~a~ 148 (286) T PRK12895 69 PRKKDWALVSGRIKMREAIAFTIIFIAIFEICTFLLNRLVFILSPIVIFLFIIDPFLKRYTAWRHIYMGSIIGLGVLAGY 148 (286) T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH T ss_conf 88899979888979999999999999999999997179999999999999998566654255509999999998999999 Q ss_pred CCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 145754320--246888887421003579988875310002572034665420204666533789999999999983533 Q gi|254780205|r 177 GALHASFSW--PAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVN 254 (310) Q Consensus 177 ~av~g~~~~--~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310) +|++|++++ .++++++++.+|+.+|||+||+||+|||+|+|+||+|++||++....+..++.++...+...+.....+ T Consensus 149 ~Av~~~~~~~~~~~lL~~a~~~W~~gfDtiYA~qD~edD~k~Gi~S~a~~fG~~~~l~i~~~~~~~~~~l~~~~~~~~~~ 228 (286) T PRK12895 149 LAVIPAFPYNLLIYIIFISSSLWIAGFDIIYVIPDIEYDKINGLKTIMNTYGIKNGLYISDIFHISSLILFWISGIYIRT 228 (286) T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99808887208999999999999999989997067320998495356998688218999999999999999999999847 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 79999999999999999998089997999-99987645999999999999986521 Q gi|254780205|r 255 FFAWIGLLIALFLTIKRIIALDISCSKQC-CSFFHSAGVVGILILICLIISLFLDQ 309 (310) Q Consensus 255 ~~~~~~~l~~~~~l~~~i~~~~~~~~~~~-~k~Fk~n~~~g~ii~~~iild~lL~~ 309 (310) .+|+.++.+...++.||+..++++|+++| ..+|+.|+++|.++++++++|.+.+. T Consensus 229 ~~~~~~l~~~~~ll~yq~~~~~~~d~~~~~~afF~~N~~iGli~~~~iil~~~fp~ 284 (286) T PRK12895 229 LWYLAALIIIYTLVIYQHLIIDPRNPINKRMSFFNANSFIGFVFLIGIILSLRFPI 284 (286) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 99999999999999999999478986999999998853999999999999982645 No 14 >PRK12874 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=485.25 Aligned_cols=287 Identities=24% Similarity=0.386 Sum_probs=263.4 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) .++|+|.|.|++|++|++..+-+ +..|.++|+...+..+.+ .++.+.++.+|.+.||+|||++||++|||||+ T Consensus 4 ~~~ki~~~~~lik~~htiFalpf---a~~~~~la~~~~~~~~~~----~~~~l~~~~~a~v~aRsag~~iN~~~Dr~iD~ 76 (291) T PRK12874 4 FTHKLKDISELVVFKHSIFSLPF---IFIAMIVASKQKNGTGWF----GFKLLILGILAAVSARNFAMGFNRLMDRDIDK 76 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 89999999999987008988999---999999986327887875----59999999999999999998998463427535 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 34234310100123321011001344310003455544444321003565444311665555433200101001456630 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFV 174 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 174 (310) +|||||+||+|+|++|++||+.+.++++.+++..++++|+.|+.+++.++++.++||++||+|++||+++|++++++|++ T Consensus 77 ~~~RT~~Rpl~sG~is~~~a~~~~~~~~~~~~~~~~~lN~l~~~ls~~~l~~~~~Yp~~KRft~~~~~~LG~~~~~~pl~ 156 (291) T PRK12874 77 DNPRTANRPSVDGRISRKGMVIFIVINALIFIVVSYFINTLAFKLSFPFLIVLGGYSYFKRFSSLAHLVLGLSLGLAPIA 156 (291) T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH T ss_conf 78435787787677799999999999999999999998699999999999999999889836537099999998889999 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHCC Q ss_conf 11145754320246888887421003579988875310002572034665420204666-53378999999999998353 Q gi|254780205|r 175 GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGIFVLCFMVAFCLLTV 253 (310) Q Consensus 175 g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~~~~~~~~~~~~~~~ 253 (310) ||+|++|+++..++++++++++|+.+|||+||+||+|||+|+|+||+|+++|++.+..+ ..++.++.+++...+...+. T Consensus 157 ~w~Av~g~~~~~~~~L~~~~~~W~~gfD~iYA~qD~e~D~~~Gl~S~p~~fG~~~~l~i~~~~h~~~~i~~~~~g~~~~l 236 (291) T PRK12874 157 GSVAVSGEIPLWSVFLALGVMFWVAGFDLLYSLQDMEFDKKRGLHSIPSKFGEKATLFISRLFHLLAVLFWLLFVWEAHL 236 (291) T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99997499989999999999999999999999775864998699765688680527999999999999999999999751 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 3799999999999999999980899979999998764599999999999998652 Q gi|254780205|r 254 NFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 254 ~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) +++|+.++.+....+.||+..++.++++.|.++|+.|+++|.++++++++|.++| T Consensus 237 ~~~y~i~~~i~~~ll~yqh~lv~~d~~~~~~afF~~N~~iglilf~~illd~l~~ 291 (291) T PRK12874 237 GFFAYLGVIVSALILLYEHYLVRKDFKKIDRAFFTLNGYLGIVFFIFIVLDVLFK 291 (291) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 6999999999999999999996288967999999972799999999999999739 No 15 >PRK12876 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=440.49 Aligned_cols=287 Identities=18% Similarity=0.172 Sum_probs=234.9 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 778999986304853159989999-9999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPC-LWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~-~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) |+|.|.|+.|++|.+ +..|- ..|..+|....+.........-++.+.+..++...||+|||++||++|||+|++| T Consensus 2 k~k~~~~likf~Hti----FalPFa~~~~~~a~~~~~~~~~~~~~~~w~~l~~~~~a~v~aRsagm~~Nr~~Dr~iD~~n 77 (299) T PRK12876 2 RIKYFQQLINCKYAL----FSALFLSASTVFALSLPEISQNLFSKEGFKIIVLGGSAFFCARTVGIIVNQIIDRAIDKKN 77 (299) T ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 699999999885699----9899999999999627655555444324999999999999997898599986241547899 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 23431010012332101100134431000345554444432100356544431166555543320010100145663011 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) ||||+||+|+|++|++||+.+.++++.+++..++++|++|+.+++.++++.++||++||+|++||+++|++++++|++|| T Consensus 78 pRT~~Rpl~~G~is~~~a~~~~~~~~~~~~~~~~~lN~l~~~Ls~~~l~~~~~Yp~~KRft~~~h~~LG~~~~~a~~~~~ 157 (299) T PRK12876 78 PRTSKRVLPAKLLSINFSWLLLLLCSFLFLSLCWFLNPLCFSLAVLSTLLMIVYPYTKRVTFLCHWILGLVYYLAILMNF 157 (299) T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH T ss_conf 77789988788879989999999999999999999729999999999999999787776121179999999999999999 Q ss_pred CCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHH Q ss_conf 14575432-----0246888887421003579988875310002572034665420204666-53378999999999998 Q gi|254780205|r 177 GALHASFS-----WPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGIFVLCFMVAFCL 250 (310) Q Consensus 177 ~av~g~~~-----~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~~~~~~~~~~~~ 250 (310) +|++++.. ..+.++..+..+|+.+|||+||+||+|||+|.|+||+|+++|++....+ ..++..+..++...++. T Consensus 158 ~Av~~~~~~~~l~~~~~l~~~~~~~wvagfD~iYA~qD~e~D~k~Gl~S~p~~fG~~~al~ia~~~h~~~~l~~~~~g~~ 237 (299) T PRK12876 158 FAIIETPLSFSLFCMASLWGISFGMIIAANDIIYAIQDLEFDREEGLFSIPARFGEKKAIRIASVNLIVSALAYILSGYF 237 (299) T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99818751179999999999999999975357887167754998498633898696008999999999999999999999 Q ss_pred HCCCHHHHHHHH--HHHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 353379999999--99999-99999980899979999998764599999999999998652 Q gi|254780205|r 251 LTVNFFAWIGLL--IALFL-TIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 251 ~~~~~~~~~~~l--~~~~~-l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) .+.+..+|...+ +.... .++++...+.++++.|.++|+.|+++|+++|++++.|.+++ T Consensus 238 ~~~~~~~y~~~l~~~~~~l~~~~h~~~~~~~~s~~~~aFF~~N~~igli~Fi~ii~~~~l~ 298 (299) T PRK12876 238 VSNKKEFYLCSLIPLVVILKTIKHYSLIDKKKSELEQKFFLGNIYLALSFFVNMIGLFLLS 298 (299) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHC T ss_conf 9854899999999999999999999972899505889999850899999999999999706 No 16 >TIGR01475 ubiA_other 4-hydroxybenzoate polyprenyltransferase, putative; InterPro: IPR006371 A fairly deep split separates this polyprenyltransferase subfamily from the set of mitochondrial and proteobacterial 4-hydroxybenzoate polyprenyltransferases, described in IPR006370 from INTERPRO. Protoheme IX farnesyltransferase (heme O synthase) (IPR006369 from INTERPRO) is more distantly related. Because no species appears to have both this protein and a member of IPR006370 from INTERPRO, it is likely that this family of sequences represent 4-hydroxybenzoate polyprenyltransferase, a critical enzyme of ubiquinone biosynthesis, in the Archaea, Gram-positive bacteria, Aquifex aeolicus, and the Chlamydias.. Probab=100.00 E-value=0 Score=420.54 Aligned_cols=287 Identities=24% Similarity=0.361 Sum_probs=254.9 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) |+|.|+||.|++|.+-.+ .+ ...|+++++...-.....-.-+..+.+.+..+..+..|++||+.|++.|+||||+|| T Consensus 1 k~~~il~l~k~ehT~FaL-PF--a~~g~lla~~~~N~t~Plfs~~~~~~l~Li~~A~~~ARt~aM~~Nr~~D~~ID~~NP 77 (301) T TIGR01475 1 KIKDILELIKFEHTLFAL-PF--AYAGALLAAKLANDTAPLFSLPSLKTLILILVALVSARTAAMAFNRIIDEEIDAKNP 77 (301) T ss_pred CHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC T ss_conf 956898899999998569-99--999999970288986320466549999999999999999975652230631234686 Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC Q ss_conf 34310100123321011001344310003455544444321003565444311665555433200101001456630111 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWG 177 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~l~g~~ 177 (310) ||||||+|+|+||+|||+.+.++..++.+..++++|++|+.+++++++...+||++||+|++||++||.+.+.++++||. T Consensus 78 Rtk~R~lv~G~is~~ea~~~~~~~~~lF~~~~~f~N~laf~Lsp~v~l~~~~YP~~KRfT~l~H~~LG~~~glA~~~G~~ 157 (301) T TIGR01475 78 RTKNRPLVSGKISKKEARTLIILSLALFLIASYFLNPLAFILSPVVLLVLIIYPYLKRFTALCHLVLGSVLGLAPLAGWV 157 (301) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 97889787764339999999999999999999999899999869999999970227776486779999999999877266 Q ss_pred CCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHH Q ss_conf 4575432--------024688888742100357998887531000257203466542-0204666533789999999999 Q gi|254780205|r 178 ALHASFS--------WPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS-YQTKLWLFILYGIFVLCFMVAF 248 (310) Q Consensus 178 av~g~~~--------~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~~~~~~~~~~~ 248 (310) |+.|+++ ..+++++++..+|+.|+|++|+.||.|+|||.|+||.|++|| |++..+...++.++.++..+.+ T Consensus 158 av~~~~~~sl~~~~~~~a~~l~~~~~fW~aGFD~iY~~qD~eFD~~~gL~Sipa~fG~~~aL~ia~~~h~~~~~~~ll~~ 237 (301) T TIGR01475 158 AVIGEISISLDELLLLVAVLLGIGVVFWVAGFDVIYAIQDYEFDKKNGLKSIPARFGVKAALKIASLSHVITFVLLLLLG 237 (301) T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 50377310166599999999999999999999998752483544450865421330558999999999999999999999 Q ss_pred HHHCC---CHHHHHHHHHHHHHHHHHHHHHCC-CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 98353---379999999999999999998089-997999-999876459999999999999865 Q gi|254780205|r 249 CLLTV---NFFAWIGLLIALFLTIKRIIALDI-SCSKQC-CSFFHSAGVVGILILICLIISLFL 307 (310) Q Consensus 249 ~~~~~---~~~~~~~~l~~~~~l~~~i~~~~~-~~~~~~-~k~Fk~n~~~g~ii~~~iild~lL 307 (310) +..+. +.+|..+.++.+..+.|+|+.+++ +|+++- .++|..|.|.|.++++++++|.++ T Consensus 238 ~~~~~~~lg~~~~l~~~~~~~~l~y~H~i~~~G~~~~~~~~~FF~~N~~~si~~l~~~~~d~~~ 301 (301) T TIGR01475 238 FYVGEKALGYIALLALLLIGLILVYEHSIVDPGKDLSKIQRAFFTVNGFLSIIFLIGVIIDVLL 301 (301) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9970268999999999999999998887743785676898998769899999999999998729 No 17 >PRK12869 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=419.97 Aligned_cols=273 Identities=20% Similarity=0.247 Sum_probs=234.1 Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 78999986304853159989999999998521234334456421699999999999999899999964138877843423 Q gi|254780205|r 19 IAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLR 98 (310) Q Consensus 19 i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~R 98 (310) +|+|+||+ ||++++++.+|+++|.++++...+ ...+....+|++++|++||++||++|||+|++|+| T Consensus 1 lk~Y~~L~---Kp~~~~l~~~~~~~g~~la~~~~~----------~~~~~~~~~g~~l~~~~~~~~N~~~DrdiD~~m~R 67 (278) T PRK12869 1 LNPYLKLL---KPRVIWLLDLAAVAGYIYAAGGVD----------WGSLIALLIVGTLASGGSAAFNHYWERDIDAVMKR 67 (278) T ss_pred CHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC T ss_conf 97689895---599999999999999999389998----------79999999999999999999983887434768888 Q ss_pred CCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHH-HHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 431010012332101100134431000345554-44443210035-6544431166-55554332001010014566301 Q gi|254780205|r 99 TRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQ-FNPFVICVGFA-LLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVG 175 (310) Q Consensus 99 T~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~-ln~~~~~l~~~-~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g 175 (310) |++||+|+|++|++||+.++..+.++|+.+++. .|+.+..+... ...+.++||. +||+|+++|+++|+++++|+++| T Consensus 68 T~~RPlpsG~is~~~a~~~~~~l~~~g~~~~~~~~~~~~a~~~~~~~~~y~~iYt~~lKr~t~~~~~igg~~ga~p~l~G 147 (278) T PRK12869 68 TSKRPLPSGLVSPKEALAYSLALSALGILLGFLLLGPLPGLFIALGWFFYAVVYTIWLKRRTWLNIVIGGFAGNAAFLAG 147 (278) T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf 88884325888899999999999999999999999999999999999999999876252066186999999888999999 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11457543202468888874210035799888753100025720346654202-04666533789999999999983533 Q gi|254780205|r 176 WGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQ-TKLWLFILYGIFVLCFMVAFCLLTVN 254 (310) Q Consensus 176 ~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310) |+|++|++++++++++...++||.+||+.||++|+|||+|+|+||+|+.+|++ ++..+..+....+.+..........+ T Consensus 148 w~a~~g~~~~~~~~l~~~~~~W~~~hf~~~a~~~~edy~~aGi~mlp~~~g~~~t~~~i~~~~~~~~~~~~~~~~~~~~g 227 (278) T PRK12869 148 YALGKGSVDLPAVLLSFAIYLWIPGHIWALAYKYREDYRRAGVPMLPAVVDEKTAVRAISILNAASIPYILLLYLYFGGG 227 (278) T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99983999858999999999998999999999947609867998886211862499999999999999999999998714 Q ss_pred HHHHHHHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 799999999-99999999998089997999999876459999999999999 Q gi|254780205|r 255 FFAWIGLLI-ALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIIS 304 (310) Q Consensus 255 ~~~~~~~l~-~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild 304 (310) ..|+....+ ....+.++++..+++|+|+|+|.|+.|+.++.+++++++++ T Consensus 228 ~~y~~~~~~~~~~~l~~~~~~~~~~~~~~a~k~F~~S~~yl~llfi~lvl~ 278 (278) T PRK12869 228 LIGLILVAAGVAATLATSIRALVNPTDEAMWKMFKASSPYLALFLLALIIS 278 (278) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999999999999999999728987999999999999999999999979 No 18 >PRK04375 protoheme IX farnesyltransferase; Provisional Probab=100.00 E-value=0 Score=413.40 Aligned_cols=285 Identities=21% Similarity=0.275 Sum_probs=242.6 Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877 Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310) Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310) ....+++|+|+||+ ||+.+.++.+|+++|+++|+.+. +....+....+|++++|++||++||++|||+ T Consensus 10 ~~~r~~lk~y~~L~---Kp~i~~l~~~t~~~g~~lA~~~~---------~~~~~~~~~~~g~~l~~~aa~~~N~~~d~di 77 (303) T PRK04375 10 RSSRATFKDYLALT---KPRVVSLNLFTALVGMLLAPPGL---------VNPPLLLLTLLGIALGAGAAGALNNYIDRDI 77 (303) T ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 97142099999996---39999999999999999956789---------9999999999999999999999977721041 Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH-HHHCCC-CCCCCCCCCHHHHHHHH Q ss_conf 84342343101001233210110013443100034555-4444432100356544-431166-55554332001010014 Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL-QFNPFVICVGFALLFI-SLLYPF-SKRFILCPQVVLGIGFA 169 (310) Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~-~ln~~~~~l~~~~~~~-~~iYp~-~KR~t~~p~~~lG~~~~ 169 (310) |++|+||++||+|+|++|++||..++..+..+|+.++. ..|+++..+++.+++. .++||. +||+|+++++++|++++ T Consensus 78 D~~m~RT~~RPlpsG~is~~~a~~~~~~l~~~g~~~l~~~~n~l~~~l~~~~~~~Y~~iYt~~lKR~t~~~~~vGgi~Ga 157 (303) T PRK04375 78 DAIMERTKNRPLVTGRISPREALVFGLVLGVLGFLLLWLFVNPLAAWLTLAGIFFYVVVYTLWLKRRTPQNIVIGGAAGA 157 (303) T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH T ss_conf 66788889985215887899999999999999999999998899999999999988875349987155244699898745 Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHH Q ss_conf 5663011145754320246888887421003579988875310002572034665420204666533789-999999999 Q gi|254780205|r 170 GGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGI-FVLCFMVAF 248 (310) Q Consensus 170 ~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~-~~~~~~~~~ 248 (310) +||++||+|++|++++++++|+...++||++|++.+|++|+|||+|+|+||+|+.+|++........+.+ .+....... T Consensus 158 ~ppl~Gw~Av~g~~~~~~~~Lf~~~~~Wq~pHf~alA~~~~~DY~~aG~~mlPv~~g~~~t~~~~~~~~~~l~~~s~~~~ 237 (303) T PRK04375 158 MPPLIGWAAVTGSISWEALILFLIIFLWTPPHFWALAIFRRDDYAAAGIPMLPVVHGIRVTKRQILLYTILLAAVTLLPV 237 (303) T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 57888899965999789999999999998687899999861069867973043145759899999999999999998999 Q ss_pred HHHCCCHHHHHHHHHHH-HHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 98353379999999999-99999999808999-799999987645999999999999986521 Q gi|254780205|r 249 CLLTVNFFAWIGLLIAL-FLTIKRIIALDISC-SKQCCSFFHSAGVVGILILICLIISLFLDQ 309 (310) Q Consensus 249 ~~~~~~~~~~~~~l~~~-~~l~~~i~~~~~~~-~~~~~k~Fk~n~~~g~ii~~~iild~lL~~ 309 (310) .....++.|.....+.. ..+.++++.+++++ ++.+++.|+.|.++..++++++++|++++. T Consensus 238 ~~~~~g~~y~~~a~~~~~~~l~~~~~~~~~~~~~~~ar~lF~~S~~yL~llf~~lvlD~ll~~ 300 (303) T PRK04375 238 LVGMAGWVYLVVALLLGAGFLYYAWRLYRDPDDKKWARKLFRYSINYLTLLFVALLVDHLLPL 300 (303) T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 980020999999999999999999999838896499999999999999999999999998858 No 19 >PRK12871 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=416.27 Aligned_cols=280 Identities=17% Similarity=0.178 Sum_probs=226.7 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) |.+++++|++|+|+| +++.|||+|+..++-.... +..+....+.++.+|+.+||+|||++||+.|||+|| T Consensus 1 m~e~l~ayi~LtR~~-----~ll~WP~lw~~~Lal~~a~-----~g~~~~~~l~if~Lg~vlmrsAGCviNDyaDR~~D~ 70 (297) T PRK12871 1 MKETLKAYIDLTRAH-----FLPAWPLLFCSGLVLAFAN-----YGGFSWELTIKAALIGLFGFEAGFVLNDYVDRKRDR 70 (297) T ss_pred CHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCH T ss_conf 946899999999883-----9988899998799999864-----699976799999999999970575110034310220 Q ss_pred C-CCCC--------CCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCC----CCCCCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 3-4234--------310100123321011001344310003455544----44432100356544431166555543320 Q gi|254780205|r 95 Q-VLRT--------RSRPLPSGQCTRFQALVFAVLQFLISFVLLLQF----NPFVICVGFALLFISLLYPFSKRFILCPQ 161 (310) Q Consensus 95 ~-~~RT--------~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~l----n~~~~~l~~~~~~~~~iYp~~KR~t~~p~ 161 (310) + +||| |+||+|||+||+|||+.+++.++++++.+.+++ |..++.+++.+..++.+||++||+|++|| T Consensus 71 ~~ve~~v~r~~r~~k~RPLpsG~vs~keAl~lf~~L~~~~~~LvL~Lp~~~~~~~~~~~l~A~~la~~YPfmKR~t~~Pq 150 (297) T PRK12871 71 LDVENTLTRYWRPFKERPIPSGKLSSKNAFALFILLAAVTSALILTLPYPNSLYVFVIMLYSYGIEAFYQVKKRNQKYPV 150 (297) T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH T ss_conf 10244210025665689799888688999999999999999999983253079999999999999999898853660329 Q ss_pred HHH--HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHH Q ss_conf 010--100145663011145754320246888887421003579988875310002572034665420204666533789 Q gi|254780205|r 162 VVL--GIGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGI 239 (310) Q Consensus 162 ~~l--G~~~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~ 239 (310) ..+ +.+++++|++|+ +++|+.+..+|+++.+..+||++|||+||++|+|||+|.|+||+|+.||++.+.+...++.. T Consensus 151 a~L~g~~~f~~~p~a~a-a~~G~~~~~~~Ll~~~~l~WTvAYDT~Yam~DredDlkiGvKStAILFG~k~~~~~i~~~~~ 229 (297) T PRK12871 151 AQLLGRTDFTLFPAAGY-LCYGQPDMTALLYMVFFYPWTMAHLGLNDFIDLENDRARGMKSIAVLYGMKGTMYWVTGFTA 229 (297) T ss_pred HHHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHH T ss_conf 99999998757899999-98199878999999999999999999998714215485283032212167633799999999 Q ss_pred HHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999983533799-9999999999999999808999799999987645999999999999986 Q gi|254780205|r 240 FVLCFMVAFCLLTVNFFA-WIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) ........ ...+.+.+. |..+........++++..+.+++..|+|+|.-|...+.+.-+++++|.. T Consensus 230 l~~~~~l~-~~~~~~~~~l~~~~~g~~ll~~~~~~l~~~~~~~~~~~a~~~~h~~~~~~~~~~~~~~~ 296 (297) T PRK12871 230 LHFLAAIF-FLRELGPIALYGFLAGFVLLAGANLYLWKEKSQDAGMKILPLYHASLVIYAVSIILDFI 296 (297) T ss_pred HHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 99999999-99752637699999999999999999975258551788888875426777588677520 No 20 >COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] Probab=100.00 E-value=0 Score=396.82 Aligned_cols=284 Identities=31% Similarity=0.498 Sum_probs=263.7 Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877 Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310) Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310) ..++.++++|.+++|++||+++.++.+|+.||..+++...+ ....+.++.++.+.+|++||++||++|||+ T Consensus 4 ~~~~~~~~~~~~l~r~~r~i~~l~~~~~~~~~~~~~~~~~~---------~~~~~~l~~l~~~~~~~ag~~iND~~D~ei 74 (289) T COG0382 4 MSLPNKLKALLKLLRLDRPIFNLLLLLPALLGLLLAASGLP---------SLKLLLLAFLAFFLARSAGYVINDLADREI 74 (289) T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 30035699999999712499899999999999999864441---------799999999999999999999999961763 Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 84342343101001233210110013443100034555444443210035654443116655554332001010014566 Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGV 172 (310) Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~~KR~t~~p~~~lG~~~~~~~ 172 (310) ||+|+||++||+|||++|++||+.+.+++.++++.+.+++|+.++.+++.+.++...||++||+|++||..+|.++++++ T Consensus 75 D~~n~rt~~RPl~sG~vS~~~a~~~~~~~~~~~~~~a~~l~~~~~~l~~~~~~l~~~Y~~~Kr~~~~~~~~lg~~~~~~~ 154 (289) T COG0382 75 DRINPRTKNRPLPSGRVSVKEALLLAILLLLLGLALALLLNPLAFLLSLAALVLALAYPFLKRFTFLPQLVLGLAFGLGA 154 (289) T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH T ss_conf 06799866799987876799999999999999999999970999999999999999999852577315999999999999 Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 30111457543202468888874210035799888753100025720346654202046665337899999999999835 Q gi|254780205|r 173 FVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLT 252 (310) Q Consensus 173 l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~ 252 (310) ++||+++.+++...++++++..++|+.++|++|++||+|+|+++|+||+|+.+|+++...+..+.......+...++..+ T Consensus 155 ~~g~~a~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~D~e~D~~~G~~s~~~~~G~~~a~~l~~~~~~~~~~~~~~~~~~~ 234 (289) T COG0382 155 LAGAAAVGGSLPLLAWLLLLAAILWTLGYDIIYAIQDIEGDRKAGLKSLPVLFGIKKALALALLLLLASALLVLLGLLAG 234 (289) T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999975853389999999999999999999987524319876972033885754489999999999999999999998 Q ss_pred CCH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 337-99999999999999999980899979999998764599999999999998 Q gi|254780205|r 253 VNF-FAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISL 305 (310) Q Consensus 253 ~~~-~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310) ... .|+.+.......+.+|+...+.++++.|.+.|+.|..+|.+++++..++. T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (289) T COG0382 235 LLGLIYLLGLLVAALLLLYQILIVDVRDPPACFALFDVNLLLGLLLFIGLILAV 288 (289) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 719999999999999999999997342214579999983699999999999974 No 21 >TIGR01473 cyoE_ctaB protoheme IX farnesyltransferase; InterPro: IPR006369 This family describes protoheme IX farnesyltransferase, also called haeme O synthase, an enzyme that creates an intermediate in the biosynthesis of haeme A . Prior to the description of its enzymatic function, this protein was often called a cytochrome o ubiquinol oxidase assembly factor. ; GO: 0008495 protoheme IX farnesyltransferase activity, 0006783 heme biosynthetic process, 0016021 integral to membrane. Probab=100.00 E-value=0 Score=393.85 Aligned_cols=280 Identities=20% Similarity=0.283 Sum_probs=241.6 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 89999863048531599899999999985212343344564216999999999999998999999641388778434234 Q gi|254780205|r 20 APYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLRT 99 (310) Q Consensus 20 ~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~RT 99 (310) |.|+||+ ||+.+.|+.+++..|+++|..+.+.... ......++...+|+.+..+++|++|+++|||||++|+|| T Consensus 1 k~y~~Lt---Kp~~~~L~~~t~~~G~~lA~~~~~~~~~---~~~~~~~~~~~~G~~L~~~~A~a~N~~~DrdiD~~M~RT 74 (297) T TIGR01473 1 KDYLQLT---KPRVISLLLITAFAGMWLASGGADKLSF---LVNLPLLLLTLLGTTLAAASANAFNMYIDRDIDKKMKRT 74 (297) T ss_pred CCHHHHH---HHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T ss_conf 9337788---6789999999999998762256665431---116899999999999999998797212146610017564 Q ss_pred CCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHH-HHHHCC-CCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 31010012332101100134431000345554-44443210035654-443116-6555543320010100145663011 Q gi|254780205|r 100 RSRPLPSGQCTRFQALVFAVLQFLISFVLLLQ-FNPFVICVGFALLF-ISLLYP-FSKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 100 ~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~-ln~~~~~l~~~~~~-~~~iYp-~~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) ++||+|+|+||++||+.++..+.++|+..++. .|+++..+++.+++ ++++|+ ++||.|+++.+++|++++.||++|| T Consensus 75 ~~RP~v~G~~~p~~al~fg~~l~~~g~~~L~~~~N~l~A~l~~~g~f~Yv~~YT~~lKR~t~~NtviGg~~Ga~PpliGw 154 (297) T TIGR01473 75 RNRPLVTGRISPREALAFGLLLGVLGVALLAAFVNPLAALLGLFGIFFYVIVYTIWLKRRTPQNTVIGGFAGAVPPLIGW 154 (297) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHH T ss_conf 56885436666667999999999999999999873999999999999888775120357421354253065121342404 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHH---HHHHHHHHHHHHHH-C Q ss_conf 1457543202468888874210035799888753100025720346654202046665337---89999999999983-5 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILY---GIFVLCFMVAFCLL-T 252 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~---~~~~~~~~~~~~~~-~ 252 (310) +|++|+++.++++|+...|+||++|.+.-|+.-+|||+++|+||+|+..|++..+.....+ .+.+....+..... . T Consensus 155 ~Av~g~~~~~~~~L~~i~F~WqPpHFwaLA~~~~dDY~~A~iPMLPvv~g~~~t~~~I~~yC~~~~~L~~~~~~~~~~~~ 234 (297) T TIGR01473 155 AAVTGSISLEAWLLFAIIFLWQPPHFWALALKYKDDYAAAGIPMLPVVKGERITKRQIALYCVYTAALFPVSLLLYFLGA 234 (297) T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 01069988789999999998767889999976578886289510454162799999999999999999999999987400 Q ss_pred CC---HHHHH-HHHHHHHHHHHHHHHHCCCC----HHH--HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 33---79999-99999999999999808999----799--99998764599999999999998 Q gi|254780205|r 253 VN---FFAWI-GLLIALFLTIKRIIALDISC----SKQ--CCSFFHSAGVVGILILICLIISL 305 (310) Q Consensus 253 ~~---~~~~~-~~l~~~~~l~~~i~~~~~~~----~~~--~~k~Fk~n~~~g~ii~~~iild~ 305 (310) .+ ++|.+ +.++.+.++.+....+++++ +++ ++|.|+.|..+..++++.+++|+ T Consensus 235 ~g~~g~~Y~~~a~~l~a~~l~~~~~~~~~~~~~~~~~~kwA~k~F~~S~~yL~~~f~~~~~~~ 297 (297) T TIGR01473 235 TGYLGWLYLIVATLLGALFLYLALKFYRDPDNYSGDRKKWARKLFKFSLIYLALLFLALLIDS 297 (297) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 020579999999999999999988444156788714568876416899999999999976179 No 22 >PRK13362 protoheme IX farnesyltransferase; Provisional Probab=100.00 E-value=0 Score=378.31 Aligned_cols=285 Identities=15% Similarity=0.123 Sum_probs=239.6 Q ss_pred HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 41054677899998630485315998999999999852123433445642169999999999999989999996413887 Q gi|254780205|r 12 DCIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD 91 (310) Q Consensus 12 ~~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d 91 (310) .|.-.+++|.|+||+ ||+.+.++++++.+|+++|..+. .....+....+|++++++++|++||++||| T Consensus 6 ~~~~~s~lk~y~~Lt---Kpri~~lv~~ta~~g~~lA~~~~---------~~~~~~l~~~lG~~l~~~sa~~~N~~~erd 73 (306) T PRK13362 6 SRQWEASVKDYFQVT---KPGIIFGNVISVAGGFFLASKGH---------VDPVLMLAAVIGLSLVVASGCALNNCIDRD 73 (306) T ss_pred CCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 453565599999986---09999999999999999817899---------999999999999999999999987157644 Q ss_pred CCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH-HHHHCC-CCCCCCCCCCHHHHHHH Q ss_conf 784342343101001233210110013443100034555-444443210035654-443116-65555433200101001 Q gi|254780205|r 92 IDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL-QFNPFVICVGFALLF-ISLLYP-FSKRFILCPQVVLGIGF 168 (310) Q Consensus 92 iD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~-~ln~~~~~l~~~~~~-~~~iYp-~~KR~t~~p~~~lG~~~ 168 (310) +|++|+||++||+|+|++|++||+.++..+..+|+.+++ ..|+++..++..+.+ ++++|+ ++||.|+++++++|+++ T Consensus 74 iD~~M~RT~~RPlp~g~is~~~A~~~~~~l~~~g~~~l~~~~N~~~a~l~~~~~~~Y~~iYT~~lKr~t~~n~~iG~i~G 153 (306) T PRK13362 74 IDAKMQRTANRVTVTGEISLGEALGFGLALGVLGFGLLAAFTNPLAALFAAFGYVVYVGIYSLYLKRNSVYGTLVGSLSG 153 (306) T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH T ss_conf 56899999999777788878899999999999999999997889999999998532788778778417641026787740 Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH Q ss_conf 45663011145754320246888887421003579988875310002572034665420204666533789999999999 Q gi|254780205|r 169 AGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAF 248 (310) Q Consensus 169 ~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~ 248 (310) ++||++||+|++|+++.++++++...++||++|.+..|+.++|||+|+|+||+|+..|++........|.+......... T Consensus 154 a~PpliGw~A~~g~l~~~~~~Lf~i~f~Wq~pHF~alA~~~r~DY~~Ag~pMLPv~~g~~~T~~~i~~y~~~l~~~sll~ 233 (306) T PRK13362 154 AMPPVVGYCAVTGQFDAGALILLLMFSLWQMPHSYAIAIFRFNDYAAAGIPVLPVARGIAKTKLHIVLYILVFALVTLLL 233 (306) T ss_pred HHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 01035413100699886899999999997569999999980875986899747577773779999999999999999999 Q ss_pred HH-HCCCHHHHHHH-HHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 98-35337999999-9999999999998089--9979999998764599999999999998652 Q gi|254780205|r 249 CL-LTVNFFAWIGL-LIALFLTIKRIIALDI--SCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 249 ~~-~~~~~~~~~~~-l~~~~~l~~~i~~~~~--~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) +. ...++.|.... ......+...++..+. ++++.+.|.|+.|..|..++++++++|+++. T Consensus 234 ~~~g~~g~~y~~~a~~l~~~~l~~~~~~~~~~~~~~~~ArklF~~Si~YL~llf~~l~lD~~v~ 297 (306) T PRK13362 234 PLAGYTGIGYLAVAAATSLWWLAMALKGYRHAVDDLKWARQLFAFSILTITALSVMMLLDFVVA 297 (306) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9987604999999999999999999999861578659999999999999999999999998215 No 23 >COG0109 CyoE Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones] Probab=100.00 E-value=0 Score=370.45 Aligned_cols=282 Identities=22% Similarity=0.289 Sum_probs=248.3 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) ..+++|+|+||+ ||+.+.++.+++..|+++|.. + ......+....+|..+..+++|++|+++|||||+ T Consensus 14 ~~~~~k~yl~Lt---KPrvi~L~~it~~~g~~lA~~-----~----~~~~~l~~~~~~g~~L~a~~a~a~N~~~DrDID~ 81 (304) T COG0109 14 SRSTIKDYLQLT---KPRVISLLLITAFAGMLLAPR-----G----SINPLLLLLTLLGGALGAGGAGAFNMYIDRDIDA 81 (304) T ss_pred HHHHHHHHHHHH---CCEEEEHHHHHHHHHHHHCCC-----C----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 677899999870---870552499999999997154-----6----5668999999999999998998986142540677 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH-HHHHCC-CCCCCCCCCCHHHHHHHHHH Q ss_conf 34234310100123321011001344310003455-5444443210035654-443116-65555433200101001456 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLL-LQFNPFVICVGFALLF-ISLLYP-FSKRFILCPQVVLGIGFAGG 171 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~-~~ln~~~~~l~~~~~~-~~~iYp-~~KR~t~~p~~~lG~~~~~~ 171 (310) +|+||++||+|+|+|+++||+.|+..+.++|+.++ +..|+++..+++.+++ ++++|+ ++||.|+++.+++|++++.| T Consensus 82 ~M~RT~~RP~~~G~i~p~~al~fgl~L~~~g~~~l~~~vn~laa~l~~~gi~~Yv~vYT~~lKR~T~~NiviGg~aGa~P 161 (304) T COG0109 82 LMERTRKRPLVTGLISPREALAFGLVLGVAGFSLLWFLVNLLAAVLGLFGIFFYVVVYTLWLKRRTPQNIVIGGFAGAMP 161 (304) T ss_pred HCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC T ss_conf 53221589887774289999999999999999999999879999999999999876321010377633025401245566 Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 63011145754320246888887421003579988875310002572034665420204666533789999999999983 Q gi|254780205|r 172 VFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLL 251 (310) Q Consensus 172 ~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~ 251 (310) |++||+|++|+++.++++|++..|+||++|.+.-|+..+|||+++|++|+|+..|++..+.....|.+......+..... T Consensus 162 pliGwaAvtg~~~~~a~~Lf~IiF~WtPpHfwALAl~~~~DY~~AgiPMlPvv~G~~~t~~~I~~y~~~l~~~sl~~~~~ 241 (304) T COG0109 162 PLIGWAAVTGSISLGAILLFAIIFLWTPPHFWALALKYKDDYKAAGIPMLPVVKGERRTKRQILLYTLALAPVSLLLALL 241 (304) T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 52305656088780599999999992667999999997887987499825413438999999999999999999999984 Q ss_pred CCC-HHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 533-7999-99999999999999980899979999998764599999999999998652 Q gi|254780205|r 252 TVN-FFAW-IGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 252 ~~~-~~~~-~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) +.. +.|. ++.+.....+.+.++..+.+|.+.++|.|+.|+.+..++|+.+++|+++. T Consensus 242 g~~g~~Y~v~a~~l~~~~l~~a~~~~~~~~~~~A~klF~~S~~yL~~lf~~l~id~~~~ 300 (304) T COG0109 242 GYVGYLYLVVATLLGAWFLALAWKLYRKDDRKWARKLFKYSIIYLALLFVALLIDSLLL 300 (304) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 00006999999999999999999996085379999999999999999999999999873 No 24 >PRK12884 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=366.15 Aligned_cols=277 Identities=18% Similarity=0.202 Sum_probs=238.7 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) |.+|+|+|+||+| |..+.+..+++++|.++|....+ ....+.+..+|+.++|++||++||++|+|+|| T Consensus 1 m~sklk~y~~L~r---p~~~~~~~~~~~~g~~lA~~~~~---------~~~~~~l~~l~~~l~~~a~~~iNd~~D~diD~ 68 (281) T PRK12884 1 LRAKLKAYLDLLR---PEHGLMAGIAVVLGAILALGFLP---------DLTKALLGFLSAFFASASAFALNDYFDVEIDR 68 (281) T ss_pred CHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC T ss_conf 9278999999965---87789999999999999767999---------78999999999999999998853624084250 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH Q ss_conf 3423431010012332101100134431000345554444432100356544431166-555543320010100145663 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVF 173 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l 173 (310) +| |++||+|||++|++||+.+++.+.++|+.+++.+|+.+..++..+.++..+||+ +||+++++++++|.+++++++ T Consensus 69 ~n--~~~RPlpsG~is~~~A~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~Y~~~lK~~~~~~~~~~~~~~g~~~l 146 (281) T PRK12884 69 IN--RPDRPIPSGRVSLREALLLAIALFILGIVAAYLISPLAFAVVVLVLVLGILYDYKLKEYGLIGNLYVAFLTGMTFI 146 (281) T ss_pred CC--CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH T ss_conf 06--8999888862789999999999999999999999999999999999999999999995765359999999999999 Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHH-HHHHHHHHHHHHHHHHC Q ss_conf 01114575432024688888742100357998887531000257203466542020466653-37899999999999835 Q gi|254780205|r 174 VGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFI-LYGIFVLCFMVAFCLLT 252 (310) Q Consensus 174 ~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~-~~~~~~~~~~~~~~~~~ 252 (310) .||.+++++.+..++.++...++|+.+||++|++||+|||+++|+||+|+++|++....+.. ++.+.+.+......... T Consensus 147 ~g~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~D~e~D~~~Gi~tlpv~~G~~~a~~~~~~~~i~~~~l~~~~~~~~~ 226 (281) T PRK12884 147 FGGIAAGELITEKSWLLAAMAFLMDLGREIAKDIEDVEGDRKRGARTLAILYGEKIAGRIAAALFIIAVALSPIPYLLGW 226 (281) T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999738975999999999999999999999805254198769926773277898999999999999999999999985 Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 3379999999999999999-9980899979999998764599999999999998 Q gi|254780205|r 253 VNFFAWIGLLIALFLTIKR-IIALDISCSKQCCSFFHSAGVVGILILICLIISL 305 (310) Q Consensus 253 ~~~~~~~~~l~~~~~l~~~-i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~ 305 (310) .++.|....++....+.|+ ++.++++|+++++|.||.+..+..+.+++++++. T Consensus 227 ~g~~y~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~m~l~~iaf~iga 280 (281) T PRK12884 227 LNYLYLAPILLADLIFLYSAYRLLRSQDRETINKIRRITLTGMLLALVAFAIGA 280 (281) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 019999999999999999999992499999999999999999999999999837 No 25 >PRK12882 ubiA prenyltransferase; Reviewed Probab=100.00 E-value=0 Score=347.01 Aligned_cols=269 Identities=17% Similarity=0.179 Sum_probs=227.9 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) ++|+|+||+ ||+...+..+.++.|..++....+ ....+.....|+.+++++||++||++|||+||.|+ T Consensus 3 ~lk~y~~L~---kp~~~~l~~~t~~~G~~la~~~~~---------~~~~~~~~~~~~~l~~~a~~~iNd~~D~eiD~in~ 70 (276) T PRK12882 3 SVRGYLELM---RPGNAVVAGLAAFIGALIAGGILT---------SPADSGLAFAAVLLVTGAGNAINDYFDREIDKINR 70 (276) T ss_pred CHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 589999995---698999999999999999758899---------68999999999999999999998475160057889 Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 343101001233210110013443100034555444443210035654443116-6555543320010100145663011 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYP-FSKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp-~~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) |+||+|||++|++||+.+++.++.+|+.+++.+|+.+..+++.+.++.++|+ ++||.++++++++|...+.+++.|| T Consensus 71 --p~RPlpsG~Is~~~Al~~~~~l~~~~~~l~~~~n~~~~~~~l~~~~~~~iYs~~lKr~~~~~ni~ig~~~g~~~l~g~ 148 (276) T PRK12882 71 --PDRPIPSGAVSPKGALAYSVLLFAAGVALAFLLNPLCLAIALFNSLLLILYAQTLKGTPGLGNASVAYLTGSTFLFGG 148 (276) T ss_pred --CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf --999887688599999999999999999999999999999999999999999999987766068999998889999999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHH-HHHHHHHHHHHCCCH Q ss_conf 1457543202468888874210035799888753100025720346654202046665337899-999999999835337 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIF-VLCFMVAFCLLTVNF 255 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 255 (310) .+++++.+...+.++...++|+.+||++|++||+|||+++|+||+|+++|++....+..++.+. +.+..+.......+. T Consensus 149 ~~~~~~~~~~~~~l~~~~f~~~~~~~~~~d~~d~egD~~~Gi~tlPv~~G~~~t~~~~~~~~~~~~~~sllp~~~~~~g~ 228 (276) T PRK12882 149 AAVGLEGLLALLVLFALAALATLAREIVKDAEDIEGDRAEGARTLPIVIGVRKASYLAAAFVLGAVLASPVPYLLSIWGL 228 (276) T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99837632899999999999999999999989778899769962050137688999999999999999999999987219 Q ss_pred HHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999-999999999808999799999987645999999999 Q gi|254780205|r 256 FAWIGLLIA-LFLTIKRIIALDISCSKQCCSFFHSAGVVGILILIC 300 (310) Q Consensus 256 ~~~~~~l~~-~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~ 300 (310) .|....++. ...+.++++..+.+|+++++|.||.|..+|++.|+. T Consensus 229 ~Yl~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~k~s~~~~~l~F~~ 274 (276) T PRK12882 229 WYLVLVAPADLVILFAAIRGLSCTDPTKSSKLLKAGMFAALAAFVV 274 (276) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999999999837999999999999999999999996 No 26 >PRK09573 (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Reviewed Probab=100.00 E-value=0 Score=329.50 Aligned_cols=275 Identities=17% Similarity=0.197 Sum_probs=227.3 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) ++|+|+||+ ||+.+.+..+.+..|.++++.... +....+.+..+|+.+++++||++||++|||+||.| T Consensus 2 ~ik~y~eL~---kp~~~~l~~~t~~~g~~la~~~~~--------~~~~~~~l~~l~~~l~~~~~~~iNd~~D~~iD~in- 69 (280) T PRK09573 2 SLKAYFELI---RPKNCLTASIGAFIGGLIASNFKI--------AHLKKLILAALVVFLVCAGGNIINDIYDIEIDRIN- 69 (280) T ss_pred CHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC- T ss_conf 888999997---789999999999999999667776--------65999999999999999999999989989667314- Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 3431010012332101100134431000345554444432100356544431166-555543320010100145663011 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) |++||+|+|+||++||+.+++.+..+|+.+.+++|+.++.++..+.++...|+. +||.++++++++|...+++++.|| T Consensus 70 -~~~RPlpsG~IS~~~A~~~~~~l~~~g~~l~~~~n~~~~~~~~~~~~l~~~Y~~~lK~~~~~~n~ii~~~~g~~~~~g~ 148 (280) T PRK09573 70 -KPNRPIPSGRISLNSAKVFSILLFIVGIILSLFINIYAFLIAVLNSILLYQYAKDLKKTGLIGNLIVALLTGLSFIFGG 148 (280) T ss_pred -CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf -8998688897079999999999999999999999999999999999999999999973757699999999999999999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHHHCCCH Q ss_conf 14575432024688888742100357998887531000257203466542020466653378999999999-99835337 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVA-FCLLTVNF 255 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~ 255 (310) .++++.. ..+.+++..++|+.++|+++++||+|||+|+|+||+|+++|++..+.+...+.+........ .+....+. T Consensus 149 ~a~~~~~--~~~~l~l~~f~~~~~~~~~~~~~d~e~D~~~Gv~tlPv~~G~~~t~~~i~~~~~l~~~~~~lp~~~g~~g~ 226 (280) T PRK09573 149 IAVGNVG--KTIILFLCAFFSTWSREIIKDIEDVEGDKKEGVITLPIKYGIKKSIYIAKILLVLLIVLSPLPYLLGIFGI 226 (280) T ss_pred HHHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH T ss_conf 9981258--99999999999999999999999865699869943576327899999999999999999999999976509 Q ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999999999-9998089997999999876459999999999999865 Q gi|254780205|r 256 FAWIGLLIALFLTIK-RIIALDISCSKQCCSFFHSAGVVGILILICLIISLFL 307 (310) Q Consensus 256 ~~~~~~l~~~~~l~~-~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL 307 (310) .|.....+....+.+ .+...+.++++++.|.+|.+..+..+.++++++|.+- T Consensus 227 ~Yl~~~~~~~~~~l~~~~~l~~~~~~~~a~~~~~~~~~~m~l~lla~li~~l~ 279 (280) T PRK09573 227 YYLIVVVICDLLFILSIIILLRNPSKEGASKASKVIKIAMILGLIAFLLGSLP 279 (280) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 99999999999999999999858989999999999999999999999982058 No 27 >PRK13593 consensus Probab=100.00 E-value=0 Score=323.23 Aligned_cols=275 Identities=14% Similarity=0.118 Sum_probs=222.5 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 05467789999863048531599899999999985212343344564216999999999999998999999641388778 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDID 93 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD 93 (310) ..-+++|+|+||+| |.......+.+..|..++.....+ ...+.+...++++..++||++||++|||+| T Consensus 3 ~~r~~ir~yleL~R---P~n~~~a~~~~~~G~~ia~~~~~~---------~~~~~~~~~~~~l~~aagn~iND~~D~eID 70 (283) T PRK13593 3 HVRETIRGLVELMR---PGNAVAAGVLTFIGAFVAGGFAVT---------PAHVTGAVAATILATAAGNAINDYFDRAID 70 (283) T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 28999999999971---889999999999999995899998---------899999999999999999999748765143 Q ss_pred CCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHH Q ss_conf 4342343101001233210110013443100034555444443210035654443116-655554332001010014566 Q gi|254780205|r 94 SQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYP-FSKRFILCPQVVLGIGFAGGV 172 (310) Q Consensus 94 ~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp-~~KR~t~~p~~~lG~~~~~~~ 172 (310) +.|+ ++||+|||+||++||+.+++.+..+|....+.+|+.+..+++.+..+.+.|+ .+||.+..++++.|...+.++ T Consensus 71 ~iN~--P~RPIPsG~IS~~~Al~~~i~l~~~~~~l~~~l~~~~~~i~~~~~~~~~~Y~~~lK~~~~~gNi~v~~~~g~~~ 148 (283) T PRK13593 71 KINR--PDRPIPRGAVSPRGALVYSVFLFVAAVVLTSVLPLLAIVIAAMNLLALVAYTELFKGLPGVGNALVAYLTGSTF 148 (283) T ss_pred CCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH T ss_conf 1038--99988888639999999999999999999999889999999999999999999995487500199999999999 Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 30111457543202468888874210035799888753100025720346654202046665337899999999999835 Q gi|254780205|r 173 FVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLT 252 (310) Q Consensus 173 l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~ 252 (310) +.||++++++.+...+.++...++||+++|+++++||+|||+++|+||+|+++|++..+.+...+.+.........+..+ T Consensus 149 l~G~~av~~~~~~~~~~l~~~~fl~t~~reiikdi~DieGD~~~G~~TLPv~~G~~~a~~ia~~~~i~~~~~s~lpy~~g 228 (283) T PRK13593 149 LFGAAAVGRILAFGVVVLFALAALATAAREIIKDVEDLDGDRAEGLRTLPIVIGVTRALRVAAGFVVVAVIASPVPYLIG 228 (283) T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999975888738999999999999999999999864219876997588162689999999999999999999999986 Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -337999999999999999999808999799999987645999999999999986 Q gi|254780205|r 253 -VNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 253 -~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) .++.|.+..+.....+.+...+. .+|+.+++|.+|.+..++++ +++++.+ T Consensus 229 ~~g~~YLi~v~~~~~~~l~~~~~~-~~~~~~~~~~~K~~m~~~~i---aF~~g~l 279 (283) T PRK13593 229 IFGWWYLVLVVPADMIMLIAVWRS-PDDPTQGQQLLKRGMFVAAA---AFVVGRL 279 (283) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHH---HHHHHHH T ss_conf 707999999999999999999866-46867899999999999999---9999777 No 28 >PRK12883 ubiA prenyltransferase UbiA-like protein; Reviewed Probab=100.00 E-value=0 Score=317.07 Aligned_cols=270 Identities=16% Similarity=0.213 Sum_probs=221.5 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) |+|+|+||+| |....+..+.+..|..++..+.+ ....+.+...++++++++||++||++|||+|+.|+ T Consensus 2 ~lk~yleL~R---p~n~~~a~~~~~~g~~ia~~~~~---------~~~~~~l~~l~~~~~~aag~~iND~~D~eiD~iN~ 69 (275) T PRK12883 2 EVKAFIEIMR---PHNCILAGIVGILGSLVAYEGIP---------DIKTLILIFLVVYLGCSGGNTINDYFDYEIDKINR 69 (275) T ss_pred CHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 6899999972---87789999999999999846899---------78999999999999999999998588884054558 Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 3431010012332101100134431000345554444432100356544431166-555543320010100145663011 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) ++||+|||++|++||+.+++.+..+|+.+.+++|+.++.+++.+.++.++|++ +||.+..+++..|...+.+++.|+ T Consensus 70 --p~RPipsG~IS~~~A~~~~~~l~~~g~~l~~~ln~~~~~l~~~~~~l~~~Ys~~lK~~~l~gNi~va~~~g~~~l~g~ 147 (275) T PRK12883 70 --PNRPLPRGAMSRKAALYYSVLQYAIGLALAYFLNIWAFLFALIAYVLTFIYAWKLKPLPFIGNVVVALLTAATPIYGA 147 (275) T ss_pred --CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH T ss_conf --999887776689999999999999999999997399999999999999998998665885599999999999999999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHH Q ss_conf 14575432024688888742100357998887531000257203466542020466653378999999999998353379 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFF 256 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 256 (310) .++ |+.+. .+.+....++|+.++|++|++||+|||++.|+||+|+++|++....+.....+........++..+.+.. T Consensus 148 ~a~-g~~~~-~~~l~~~afl~~l~reivkdieD~egD~~~G~~TlPi~~G~~~a~~ia~~~~~l~~~~s~lp~~~g~~~~ 225 (275) T PRK12883 148 VGV-GRIGL-AGYLAICAFLVNVSREIMKDIEDIEGDMAKGAKTLPIIIGKKRAAYIGAIFGFLTVIASFLPVKVGIGLG 225 (275) T ss_pred HHH-CCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 995-75409-9999999999999999999999861098769957378946797999999999999999999999977399 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999808999-799999987645999999999999986 Q gi|254780205|r 257 AWIGLLIALFLTIKRIIALDISC-SKQCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 257 ~~~~~l~~~~~l~~~i~~~~~~~-~~~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) |+..+.+....+.+++...++++ .++.+|.+|.|...|++ ++.++.+ T Consensus 226 y~~~i~v~~~~~~~~~~~~~~~~~a~~~~~~lk~~m~l~li---af~~g~l 273 (275) T PRK12883 226 YLPIIPVDAMILKASIDVLRDPETAHKGQKLLKIATFLAVI---SFLIGAL 273 (275) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH---HHHHHHH T ss_conf 99999999999999999964922269999999999999999---9999773 No 29 >PRK13594 consensus Probab=100.00 E-value=2.7e-40 Score=264.41 Aligned_cols=270 Identities=19% Similarity=0.230 Sum_probs=192.6 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887784342 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVL 97 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~ 97 (310) ++|+|+||+|. ....+-.+..+.|.+++....+. . ..+....+++..++|+++||++|+|+|+.|+ T Consensus 2 sl~ay~~L~Rp---~n~~~a~~~~~~g~~lA~~~~~~--------~---~~l~~~~v~~~~a~g~~iND~~D~eiD~iN~ 67 (278) T PRK13594 2 SVAAYLSIIRP---VNAVVAGLAAIIAYLIATGTLPA--------E---SLLLFCIVLLITGAGNVINDYFDKEIDAINR 67 (278) T ss_pred CHHHHHHHHHH---HHHHHHHHHHHHHHHHHCCCCCH--------H---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 78999999449---88999999999999997588865--------8---8999999999999999999787860453459 Q ss_pred CCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 3431010012332101100134431000345554444432100356544431166-555543320010100145663011 Q gi|254780205|r 98 RTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVGW 176 (310) Q Consensus 98 RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g~ 176 (310) |+||+|||++|+++|..++..+..+|+.+....|+.+..+.+...++..+|+. +||.....++..+...+..++.|. T Consensus 68 --P~RPipsg~is~~~Al~~~~~l~~~g~~~~~~~~~~~~~i~l~~~~ll~~Ys~~LK~~~liGNi~Va~l~g~~~~fg~ 145 (278) T PRK13594 68 --PDRPIPSGQISPGGALAYAILLFLIGNAIAILTTPLCLGIALVNSVILILYAARLKKTPFLGNISVAYLAASIFLFGG 145 (278) T ss_pred --CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH T ss_conf --999888886299999999999999999999998099999999999999999999975672688999999889999999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHCCCH Q ss_conf 1457543202468888874210035799888753100025720346654202046665-337899999999999835337 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLF-ILYGIFVLCFMVAFCLLTVNF 255 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~ 255 (310) .++.+......+.++...|++++++|++.++||.|+|++.|++|+|+++|++....+. .+..+.+.+..+. +.. .+. T Consensus 146 ~~~~~~~~~~~~~l~~~aFl~~l~REIvKDieDieGD~~~g~~TLPi~~G~kka~~~a~~~~~~~~~~s~lP-y~~-~g~ 223 (278) T PRK13594 146 AIAGTEGLLSMLPIAAITFLAMLARELLKDAEDIEGDRAHGARTLPMLIGVRKTIYLAFICATFAVLASLLP-YLW-WGA 223 (278) T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHH T ss_conf 997456418999999999999999999945530123887799740779718989999999999999999889-998-749 Q ss_pred HHHHHHHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHH Q ss_conf 9999999999999-99999808999799999987645999999---999999986 Q gi|254780205|r 256 FAWIGLLIALFLT-IKRIIALDISCSKQCCSFFHSAGVVGILI---LICLIISLF 306 (310) Q Consensus 256 ~~~~~~l~~~~~l-~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii---~~~iild~l 306 (310) .|+...++....+ +..+...+.+++++ .+..|.+.+.-... ++++.++.+ T Consensus 224 ~Yl~~i~~~~~~~l~~~~~~l~~~~~~~-~~a~~~~~~lk~~m~~~l~aF~i~~l 277 (278) T PRK13594 224 FYLAGIAVVDAVILFGAIRGLKCTTSEE-LIASNSTTILKAGMFASLLVFLLSAV 277 (278) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9999999999999999999985079327-78888889999999999999998721 No 30 >PRK07566 bacteriochlorophyll/chlorophyll a synthase; Reviewed Probab=100.00 E-value=6.9e-40 Score=261.93 Aligned_cols=261 Identities=18% Similarity=0.258 Sum_probs=194.6 Q ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 46778999986304853159989999999998521234334456421699999999999999899999964138877843 Q gi|254780205|r 16 GSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQ 95 (310) Q Consensus 16 ~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~ 95 (310) .+.+++.+||+ ||+.| +|..|+..+.+.+.+...+.........+.+...|. +++|.+|++||++|||+|++ T Consensus 18 ~~~~~~~l~l~---kPvTW----~p~~w~~~CG~~ssG~~~w~~~~~~~~~~g~~l~GP-l~~g~sq~iNDy~DreiDaI 89 (308) T PRK07566 18 TSIPSARLQLM---KPITW----FPPMWAFLCGAVSSGAFGWTLENVLKLLAGMLLAGP-LLCGTSQTLNDYFDREVDAI 89 (308) T ss_pred CCCHHHHHHHC---CCCCC----CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHCCC T ss_conf 74637886625---89745----660899864153068887756679999999997507-87440028988887530124 Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC---C-CCCCCCCCCHHHHHHHH-H Q ss_conf 42343101001233210110013443100034555444443210035654443116---6-55554332001010014-5 Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYP---F-SKRFILCPQVVLGIGFA-G 170 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp---~-~KR~t~~p~~~lG~~~~-~ 170 (310) || ++||||||++|.+||+.+...++++|+.+.+.+|+..+.+++++.++..+|+ + +||..++++..+|+++- . T Consensus 90 Ne--P~RPIPSG~is~~~a~~~~~~l~~l~~~~a~~L~p~~~~~~~~gl~la~~YSapPlRLK~~gw~Gn~~vg~sY~~l 167 (308) T PRK07566 90 NE--PYRPIPSGAISLRWVLIQIAVLLVLGLAVAYLLGPWVFLAALVGLFLAWIYSAPPIRLKQNGWLGNYAVGLSYEGL 167 (308) T ss_pred CC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH T ss_conf 58--8988876787899999999999999999999986799999999999999963777885336664019999999999 Q ss_pred HHHHCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH-HHHHHHHHHHHH Q ss_conf 66301114575-4320246888887421003579988875310002572034665420204666533-789999999999 Q gi|254780205|r 171 GVFVGWGALHA-SFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFIL-YGIFVLCFMVAF 248 (310) Q Consensus 171 ~~l~g~~av~g-~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~-~~~~~~~~~~~~ 248 (310) +-+.|.++.++ ..+++.+.+.+...+++.+.+|+++++|+|+|||.|++|+||++|+++...+... ..+.-....... T Consensus 168 pw~~G~a~~~~~~p~~~i~~lAllysl~a~GImtlnDfKdiEGDr~~GlrSLPV~~G~~~Aa~iA~~~m~~~Q~~v~~~l 247 (308) T PRK07566 168 PWWAGAAAFGAGQPSWPIVILALLYSLGAHGIMTLNDFKSVEGDRQLGLRSLPVVFGEKNAARIACVVIDIFQLAVIAYL 247 (308) T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99988998557788507999999999999999999632213552752987727241478899999999989999999999 Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH Q ss_conf 9835337999999999999999999808999799999987 Q gi|254780205|r 249 CLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFH 288 (310) Q Consensus 249 ~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk 288 (310) +..+......+.......++..|...+ +||++.--.+. T Consensus 248 ~~~g~~~~a~~v~~ll~~Q~~~~~~ll--~dP~~~a~~Yn 285 (308) T PRK07566 248 LAWGQPLYAAIVALLLIPQITLQDILL--RDPRERDVWYN 285 (308) T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHH--HCHHHHCHHHC T ss_conf 997547999999999999999999998--69787440110 No 31 >KOG1380 consensus Probab=100.00 E-value=2.6e-38 Score=252.28 Aligned_cols=278 Identities=20% Similarity=0.169 Sum_probs=228.8 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 67789999863048531599899999999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) +.+++|+||. ||+-..|.+.++..|+.++..... +-.++...+|+.+.+++++++||++|...|+|| T Consensus 92 k~~~~y~eLs---K~rLT~LVV~tt~~gYalap~p~s----------~~~l~~~tvGT~L~S~sANaiNQ~~E~~~DsqM 158 (409) T KOG1380 92 KYARCYLELS---KPRLTMLVVLTTMTGYALAPGPFS----------FPTLLYTTVGTGLCSASANAINQIFEPPFDSQM 158 (409) T ss_pred CHHHHHHHHC---CCCEEEEEEEECCCCCCCCCCCCC----------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH T ss_conf 0588998746---550688874612343111566878----------303689864168877636766543168712656 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHH-HHHCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 23431010012332101100134431000345554-444432100356544-4311665555433200101001456630 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQ-FNPFVICVGFALLFI-SLLYPFSKRFILCPQVVLGIGFAGGVFV 174 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~-ln~~~~~l~~~~~~~-~~iYp~~KR~t~~p~~~lG~~~~~~~l~ 174 (310) +||++||+|+|++|+.+|+.|+.+....|..++++ .|+++..+|...+++ ..+|+.+||....+..++.+.++.||+| T Consensus 159 ~RT~~Rplv~g~isp~hA~~fAt~~g~~G~slL~~gvNpl~a~Lga~Ni~LY~~vYTPlKrihiinTWvGavVGAIPPLM 238 (409) T KOG1380 159 KRTQNRPLVRGRISPLHAVTFATLTGTAGVSLLAFGVNPLAAALGAGNIFLYAGVYTPLKRIHIINTWVGAVVGAIPPLM 238 (409) T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCC T ss_conf 76416664447657378889998861555111101536788887312021000003623341013437777752377411 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 11145754320246888887421003579988875310002572034665420204666533789999999999983533 Q gi|254780205|r 175 GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVN 254 (310) Q Consensus 175 g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 254 (310) ||+|.+|.++..+++|....+.|+..|....++.-++||+|+|.+|++++-..- .+....-|.++..-+....-..+.. T Consensus 239 GwAAasg~l~~ga~iLa~~LyaWQfPHFnaLS~~lR~DYs~~GY~Mma~~np~l-~rr~alr~s~a~~~L~~~~~~~~lT 317 (409) T KOG1380 239 GWAAASGLLDPGAMILAGILYAWQFPHFNALSWNLRNDYSKAGYRMMAVTNPGL-CRRVALRYSLAFLPLSYAAPSTDLT 317 (409) T ss_pred HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHCCEEEEEEECCCH-HHHHHHHHHHHHHHHHCCCCCCCCC T ss_conf 034303677840889998998830630666544301135534678999656431-1678999888885230025435765 Q ss_pred HHHH--HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 7999--99999999999999980899979999998764599999999999998652 Q gi|254780205|r 255 FFAW--IGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 255 ~~~~--~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) .++| -+..+..++.+...+..+.+|-++..|.|..|....-++++.+++.+.-+ T Consensus 318 ~~wf~i~s~~~na~l~~~afkFY~~~d~~~aRklF~aSLlhLP~lmll~l~~k~~~ 373 (409) T KOG1380 318 TWWFAIESLPLNAYLAYLAFKFYRDRDYHNARKLFFASLLHLPLLMLLMLIHKKGR 373 (409) T ss_pred CCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 51246434207699999988874365434689999999998999999999875212 No 32 >pfam01040 UbiA UbiA prenyltransferase family. Probab=100.00 E-value=1.8e-35 Score=234.98 Aligned_cols=245 Identities=22% Similarity=0.323 Sum_probs=192.8 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCC Q ss_conf 89999999998521234334456421699999999999999899999964138877843423431010012332101100 Q gi|254780205|r 37 AVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALV 116 (310) Q Consensus 37 l~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~ 116 (310) ...|.++|..++...... .........+..+++.++|++||++|+|+|++|+||++||+|+|++|+++|.. T Consensus 4 ~~~~~l~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Nd~~D~~~D~~~~~~~~Rpl~~g~is~~~~~~ 74 (258) T pfam01040 4 ALLPVLAGLALAAGGALD---------LLLLLLLLLALLLLQAAGNVLNDYFDREIDADNPNKPSRPLPSGRISPREALL 74 (258) T ss_pred HHHHHHHHHHHHCCCCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH T ss_conf 999999999998579999---------99999999999999999999984851841866777888877899977999999 Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH Q ss_conf 134431000345554444432100356544431166--555543320010100145663011145754320246888887 Q gi|254780205|r 117 FAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF--SKRFILCPQVVLGIGFAGGVFVGWGALHASFSWPAFFLCIGT 194 (310) Q Consensus 117 ~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~--~KR~t~~p~~~lG~~~~~~~l~g~~av~g~~~~~~~~L~~~~ 194 (310) ++..+..+|..+....|+.+..++....+..++|+. +||.+.++++..|++++.++++||.+++++.+.+++.+.... T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ys~~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258) T pfam01040 75 LALALLLLGLLLALLLGPLLLLLGLLGLLLGLLYSLPRLKRRPLLGELVVGLAFGLLILLGAYAVGGDIPSPLLLLALPL 154 (258) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH T ss_conf 99999999999999999999999999999999994464134687662102239889999999998088869999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 42100357998887531000257203466542020466653378999999999998353379999999999999999998 Q gi|254780205|r 195 IFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIA 274 (310) Q Consensus 195 ~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~ 274 (310) ++|+......++++|+|+|++.|.+|+|+++|++............................+..........+...... T Consensus 155 ~~~~~~~~~~~~~~D~e~D~~~g~~tl~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 234 (258) T pfam01040 155 FLLGLAILLANDIRDVEGDRKAGRRTLPVRLGEKRALALLALLLAAALLLLALLLLLLAPLLLLLAVLLAALALLRALRL 234 (258) T ss_pred HHHHHHHHHHHHCCCHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999703578799879985163477776999999999999999999999987899999999999999999999 Q ss_pred HCCCCHHHHHHHHHHH Q ss_conf 0899979999998764 Q gi|254780205|r 275 LDISCSKQCCSFFHSA 290 (310) Q Consensus 275 ~~~~~~~~~~k~Fk~n 290 (310) .+.++++++.+.++.. T Consensus 235 ~~~~~~~~~~~~~~~~ 250 (258) T pfam01040 235 LRRRNPEEPARLALFL 250 (258) T ss_pred HHCCCHHHHHHHHHHH T ss_conf 7259988999999999 No 33 >TIGR01476 chlor_syn_BchG bacteriochlorophyll/chlorophyll synthetase; InterPro: IPR006372 These are a subfamily of a large family of polyprenyltransferases that also includes 4-hydroxybenzoate octaprenyltransferase and protoheme IX farnesyltransferase (heme O synthase). Members of this family are found exclusively in photosynthetic organisms, including a single copy in Arabidopsis thaliana.; GO: 0030494 bacteriochlorophyll biosynthetic process. Probab=100.00 E-value=1.3e-33 Score=223.67 Aligned_cols=259 Identities=15% Similarity=0.231 Sum_probs=189.2 Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 899998630485315998999999999852123433445----6421699999999999999899999964138877843 Q gi|254780205|r 20 APYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVL----GWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQ 95 (310) Q Consensus 20 ~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~----~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~ 95 (310) |.-+||+ ||+.| +|-.|+.++.+.+.+..... ......-+++.+..|.. +.|-.=++||++|||+|+. T Consensus 1 ~~~l~L~---~PvTW----~~p~w~~~CGA~asG~~~g~dWtr~e~~~~~LlGmllaGPL-~tG~sQ~~Ndy~DR~vDAi 72 (295) T TIGR01476 1 RARLELM---KPVTW----IPPIWAVLCGAVASGALRGSDWTRVEKWLLLLLGMLLAGPL-LTGLSQSVNDYFDRDVDAI 72 (295) T ss_pred CCCCCCC---CCCCC----HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCC T ss_conf 9620026---87333----43699998666660333687655523489999999875145-4103777643315654663 Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCC-------CCCHHHHHHHHHHCC---C-CCCCCCCCCHHH Q ss_conf 42343101001233210110013443100034555444443-------210035654443116---6-555543320010 Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFV-------ICVGFALLFISLLYP---F-SKRFILCPQVVL 164 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~-------~~l~~~~~~~~~iYp---~-~KR~t~~p~~~l 164 (310) || ++||||||+||.+|+....+++..+|..+.+.++... ..+.+.+++++.+|+ . +||..|+.+--+ T Consensus 73 Ne--P~RpIPsG~iS~~~~~~~~~vL~~~~~~va~~LG~~~qhdfPi~~~~~~~G~~~A~~YS~~PikLK~~GWlG~~~v 150 (295) T TIGR01476 73 NE--PQRPIPSGAISLREVLILILVLTVAGLAVALVLGNWLQHDFPIIVLFTVVGVVLALIYSLPPIKLKRNGWLGPALV 150 (295) T ss_pred CC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH T ss_conf 77--3558988600678999999999999999998726643332269999999999999997046301243556007899 Q ss_pred HHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH-HHHHHHH Q ss_conf 100145663011145754--3202468888874210035799888753100025720346654202046665-3378999 Q gi|254780205|r 165 GIGFAGGVFVGWGALHAS--FSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLF-ILYGIFV 241 (310) Q Consensus 165 G~~~~~~~l~g~~av~g~--~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~-~~~~~~~ 241 (310) |+++-.=+-++..|+-+. +++....+.+..-+-..|--++.++.-.|+|||.|+||+||.+|.++...+. .....+- T Consensus 151 g~sY~~L~W~AGha~fa~GaL~~~~vvvALlys~~A~Gi~~lNDfKSveGDr~lGl~SLpV~~G~~~aa~~~~~~~~~~q 230 (295) T TIGR01476 151 GLSYEGLPWMAGHAVFAPGALTFEIVVVALLYSLGAHGIMTLNDFKSVEGDRQLGLRSLPVMLGVKVAAKLAVTTIDVFQ 230 (295) T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 99974567899999860379851558898899887616677732452015113463201103124667899998999999 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH Q ss_conf 999999998353379999999999999999998089997999999876 Q gi|254780205|r 242 LCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHS 289 (310) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~ 289 (310) +.........+.....-+..+..+...+.|...+ .+||++..-.|+. T Consensus 231 ~~v~~ll~~wG~~~~A~~v~~lLvAq~~~~~~~f-lr~p~~n~v~Y~~ 277 (295) T TIGR01476 231 ILVIGLLLIWGQPLVATIVLLLLVAQIIAQAKLF-LRDPEENEVKYNA 277 (295) T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCEEH T ss_conf 9999999983237899999999843366424864-2686447530101 No 34 >PRK12392 bacteriochlorophyll c synthase; Provisional Probab=100.00 E-value=2e-34 Score=228.73 Aligned_cols=253 Identities=16% Similarity=0.218 Sum_probs=187.6 Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877 Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310) Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310) .....|+|+.+||+ ||+.| +|..|+..+.+.+.+.............++....|.. +.|.+-++||++|||+ T Consensus 6 ~g~t~k~k~~LqLl---KPVTW----iPpmWa~~CGavsSG~~~~~~~~~l~~l~~mlLaGPL-~~G~SQtiNDwyDReV 77 (331) T PRK12392 6 LGFVDKIRAHLELL---DPVTW----ISVFPCLAGGVMASGAMQPTLHDYLLLLALFLMYGPL-GTGFSQSVNDYFDLEL 77 (331) T ss_pred CCCCHHHHHHEEEC---CCCCC----CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH-HHCHHHHHHHHHHHCC T ss_conf 76104266410203---88543----6736977532430378787545799999999982626-5251578777765212 Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCC--------CCCCHHHHHHHHHHC---CC-CCCCCCCC Q ss_conf 8434234310100123321011001344310003455544444--------321003565444311---66-55554332 Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPF--------VICVGFALLFISLLY---PF-SKRFILCP 160 (310) Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~--------~~~l~~~~~~~~~iY---p~-~KR~t~~p 160 (310) |+.|| ++||+|||+||.+|+....++++.++..+.+.+... .+...+.+++++.+| |+ +||..|+. T Consensus 78 DAINE--P~RPIPSGrIs~~~~l~~~~i~~lla~~l~~~lg~~~~~~~~~~i~~a~l~Gl~~A~iYSAPPlrLK~nGW~G 155 (331) T PRK12392 78 DRVNE--PTRPIPSGRLSEKEALWNSIIVLLLAIGLGVWLGLHIGGERGMVIISSILAGLFVAYIYSAPPLKLKKNILTS 155 (331) T ss_pred CCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC T ss_conf 11269--9999999877478799999999999999999972254033206999999999999998718805544335545 Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHH-HHHHHH Q ss_conf 0010100145663011145754320246888887421003579988875310002572034665420204666-533789 Q gi|254780205|r 161 QVVLGIGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL-FILYGI 239 (310) Q Consensus 161 ~~~lG~~~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i-~~~~~~ 239 (310) +..+|+++..=+.....|+.++..++...+.....+=..+.-|+......|+||+.|+||+||.+|.++..++ .....+ T Consensus 156 n~avG~SY~~LpW~tG~Alf~~l~p~iv~lAlLYslga~GImtlNDFKSvEGDr~~Gl~SLPV~~G~~~A~wI~~~~IDl 235 (331) T PRK12392 156 APAVGFSYGFITFLSANALFSDIRPEVVWLAGLNFFMAIALIIMNDFKSVEGDKEGGLKSLTVMIGAKNTFLVSFIIIDL 235 (331) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEECCCCHHHHHHHHHHH T ss_conf 39999998789999999986568829999999999886266432033223461652944326454354217777899989 Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999983533799999999999999999980 Q gi|254780205|r 240 FVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIAL 275 (310) Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~ 275 (310) ....+.+..+..++....|..+......+..|+..+ T Consensus 236 ~f~~~~~l~~~w~f~~~~~~~~~~l~~~~~~q~~l~ 271 (331) T PRK12392 236 VFAVFAWLAWSWGFTVLMYFILVGLVLNIVIQIQLY 271 (331) T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEE T ss_conf 999999999973319999999999998761477887 No 35 >PRK12887 ubiA tocopherol phytyltransferase; Reviewed Probab=99.95 E-value=1.7e-27 Score=186.51 Aligned_cols=265 Identities=18% Similarity=0.195 Sum_probs=165.0 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) +.+-+++..+-+|.|.-+|+-+-. .....++....++.... . ....+....+-..++...-+-+||++|||||| T Consensus 10 ~~~~l~a~~~FsRPhTiiGT~l~v---~~~~l~a~~~~~~~~~~--~-~~~~~l~~~~a~l~~NiyiVGlNq~~D~eIDk 83 (309) T PRK12887 10 MMPWLYALWKFSRPHTIIGTSLSV---LGLYLIAIAVSSNSFAL--T-NLGLLLGAWVACLCGNVYIVGLNQLTDIEIDR 83 (309) T ss_pred HHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHCCCCCCH--H-HHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHH T ss_conf 666899999873847999899999---99999997516763338--9-99999999999995132033101466554131 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC----CCCCCCCCCHHH----HH Q ss_conf 3423431010012332101100134431000345554444432100356544431166----555543320010----10 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF----SKRFILCPQVVL----GI 166 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~----~KR~t~~p~~~l----G~ 166 (310) .|| ++||+|||++|.++|........++|+.+.+.+++..+....++.++...|+. +||+-++..... |. T Consensus 84 INk--P~lPIpSG~is~~~g~~iv~~~~~lsl~la~~lg~~l~~~~~i~l~lg~aYS~PpLRlKr~~~~aalcI~~vrg~ 161 (309) T PRK12887 84 INK--PHLPLAAGEFSRRQGQIIVIITGILALILAALLGPWLLLTVGISLLIGTAYSLPPIRLKRFPLLAALCIFTVRGV 161 (309) T ss_pred CCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH T ss_conf 268--899888777668889999999999999999997078999999999999998078466543323777887776779 Q ss_pred HHHHHHHH--CCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH-HHHHHHHH Q ss_conf 01456630--111-457543202468888874210035799888753100025720346654202046665-33789999 Q gi|254780205|r 167 GFAGGVFV--GWG-ALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLF-ILYGIFVL 242 (310) Q Consensus 167 ~~~~~~l~--g~~-av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~-~~~~~~~~ 242 (310) ..++|... .++ ...+..+.+.+++.....+.+.+..+..+++|+|+||+.|++|+|+++|++....+. .+...+.. T Consensus 162 iv~lg~~~~~~~~~~~~~~~~~~i~~~t~f~~~fa~~Iai~KDipDIEGDr~~GI~Tl~V~LG~k~v~~l~~~ll~~~Y~ 241 (309) T PRK12887 162 IVNLGLFLHFQWLLQGPVEIPPPVWVLTLFVLVFTFAIAIFKDIPDMEGDRQYNITTFTLRLGKQRVFKLSCWVLTACYL 241 (309) T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEECHHHHHHHHHHHHHHHHHHHHH T ss_conf 99889999999997577778837999999999999999998157423432751976543475389999999999999999 Q ss_pred HHHHHHHHHCCCH--HH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHH Q ss_conf 9999999835337--99-999999999999999980899979999998 Q gi|254780205|r 243 CFMVAFCLLTVNF--FA-WIGLLIALFLTIKRIIALDISCSKQCCSFF 287 (310) Q Consensus 243 ~~~~~~~~~~~~~--~~-~~~~l~~~~~l~~~i~~~~~~~~~~~~k~F 287 (310) .....+......+ .. ..+-.+....+.++.+.+|.+++++-.+++ T Consensus 242 ~~i~~g~~~~~~~~~~~~~~~H~~l~~~l~~~~~~vdl~~k~~i~sfY 289 (309) T PRK12887 242 GMIAVGLLFLPSINSAFLIVSHLLLLALLWWRSQRVDLEDKSAIAQFY 289 (309) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH T ss_conf 999999972466888999999999999999997307853468999999 No 36 >PRK06080 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated Probab=99.94 E-value=3.5e-25 Score=172.42 Aligned_cols=280 Identities=18% Similarity=0.116 Sum_probs=190.9 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--C Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887--7 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD--I 92 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d--i 92 (310) -.+++|+|++++| |...-.-+.|.+.|..+|... +.. ......+..+++.+...+++.+||++|.+ . T Consensus 5 ~~~~lk~w~~a~R---p~tl~~s~~pvllG~alA~~~----g~f----~~~~~~l~ll~~~~~q~~~N~~NDY~D~~~G~ 73 (300) T PRK06080 5 QMSTFQAWLELAR---PKTLPAAFAPVLVGTALAYWL----GSF----HPLLALLALIAALLLQIAVNLANDYGDYVKGT 73 (300) T ss_pred CCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHC----CCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 5657999999972---788999999999999999986----983----69999999999999999999988687886477 Q ss_pred CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHHHCCCC-CCC--CCCCCHHHH Q ss_conf 8434234310100123321011001344310003----455544444321003565444311665-555--433200101 Q gi|254780205|r 93 DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISF----VLLLQFNPFVICVGFALLFISLLYPFS-KRF--ILCPQVVLG 165 (310) Q Consensus 93 D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~----~~~~~ln~~~~~l~~~~~~~~~iYp~~-KR~--t~~p~~~lG 165 (310) |..+.+++.|++++|.+|++|+...+..+..++. .+.+..++....++..+....+.|+.. +|. +.+..+..+ T Consensus 74 D~~~~~g~~r~i~~g~is~~~~~~~~~~~~~~a~~~G~~l~~~~g~~~l~lg~~~~~~~~~Yt~gP~~l~y~gLGei~v~ 153 (300) T PRK06080 74 DTEDRVGPLRAIGRGLISPKQVKRAAIAFFGLAALLGLLLALASGWWLLLVGLLCIAAAILYTGGPKPYGYTGLGELFVF 153 (300) T ss_pred CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH T ss_conf 74314688424515896899999999999999999999999996579999999999999997279863445664217899 Q ss_pred HHHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH Q ss_conf 00145663-01114575432024688888742100357998887531000257203466542020466653378999999 Q gi|254780205|r 166 IGFAGGVF-VGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCF 244 (310) Q Consensus 166 ~~~~~~~l-~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~ 244 (310) +.+|.-+. .++-..++++++.+++......+++...-.+..++|+|+|+++|.+|+|+++|++................ T Consensus 154 ~~~G~l~v~g~~y~qt~~~~~~~~l~s~p~gl~~~~iL~~Nn~rD~e~D~~~Gk~TL~v~lG~k~a~~l~~~l~~~~yl~ 233 (300) T PRK06080 154 VFFGLVAVLGTYYLQAGTVDSAVFLPAVPCGLLAGAVLLANNIRDIETDRENGKNTLAVRLGDVNARRLHAILLALAYLC 233 (300) T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH T ss_conf 99507999999999936867999999989999898999984642017799869931673466177999999999999999 Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHH----HHHHHHHHHHHHHHHHHHHH Q ss_conf 9999983533799999999999999999980-8999799999----98764599999999999998 Q gi|254780205|r 245 MVAFCLLTVNFFAWIGLLIALFLTIKRIIAL-DISCSKQCCS----FFHSAGVVGILILICLIISL 305 (310) Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~-~~~~~~~~~k----~Fk~n~~~g~ii~~~iild~ 305 (310) .......+..+++....++......+..+.+ +.+++++-.. .-+.+..+|.++.++++++. T Consensus 234 ~~~~~~~~~~p~~~ll~ll~lP~a~~~~~~~~~~~~~~~l~~~l~~ta~~~~~~~il~~igllLs~ 299 (300) T PRK06080 234 IILLALLGLASPWVLLFLLALPLAVKAARPVLRKQKPATLIPALKATGKTALLFGLLFAIGLLLSQ 299 (300) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999875169999999999999999999985588487999999999999999999999999822 No 37 >TIGR02056 ChlG chlorophyll synthase, ChlG; InterPro: IPR011799 This entry represents the strictly cyanobacterial and plant-specific chlorophyll synthase ChlG. ChlG is the enzyme (esterase) which attaches the side chain moiety onto chlorophyllide a. Both geranylgeranyl and phytyl pyrophosphates are substrates to varying degrees in enzymes from different sources . Thus, ChlG may act as the final or penultimate step in chlorophyll biosynthesis (along with the geranylgeranyl reductase, ChlP).. Probab=99.92 E-value=5.4e-25 Score=171.30 Aligned_cols=263 Identities=17% Similarity=0.210 Sum_probs=195.2 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 67789999863048531599899999999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) +++|--++|+ ||+.| .|-+||..+.+...++..+......-...++...|..+. |-.-++||++|||||+.| T Consensus 14 ~~Wkirlql~---kP~tW----~Pl~WGvvCGaa~sGn~~W~~e~v~k~~~Cm~~sGP~lt-Gytqt~nd~ydr~idain 85 (306) T TIGR02056 14 SKWKIRLQLT---KPVTW----IPLVWGVVCGAAASGNYTWSLEDVLKAILCMLLSGPLLT-GYTQTLNDFYDREIDAIN 85 (306) T ss_pred CEEEEEEEEE---CCCCC----CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHCCHHHHC T ss_conf 1245676652---57321----113322220132567521158999999999886041010-045666655301012312 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCC-------CCCCCCHHHHHHHHHHC---CC-CCCCCCCCCHHHH Q ss_conf 2343101001233210110013443100034555444-------44321003565444311---66-5555433200101 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFN-------PFVICVGFALLFISLLY---PF-SKRFILCPQVVLG 165 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln-------~~~~~l~~~~~~~~~iY---p~-~KR~t~~p~~~lG 165 (310) | +.||+|||++|..|...-..++...|+.+...++ |....+++.+.++.++| |+ +|+..|..+.-+| T Consensus 86 e--PyrPiPsGais~P~v~tq~~~l~~~G~~~a~~ld~WaGh~~P~v~~lal~Gs~~~~iysaPPlklkqnGW~Gn~alG 163 (306) T TIGR02056 86 E--PYRPIPSGAISVPEVVTQVVLLLLAGLAVAFILDLWAGHETPTVTVLALFGSLLAYIYSAPPLKLKQNGWLGNYALG 163 (306) T ss_pred C--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH T ss_conf 7--78778876556616999999999967788776643116677500013467789888760886211126530104341 Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH Q ss_conf 00145663011145754320246888887421003579988875310002572034665420204666533789999999 Q gi|254780205|r 166 IGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFM 245 (310) Q Consensus 166 ~~~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~ 245 (310) .++-.-|.-+..|..|++++....+-+...+-.+|-..+..+...|+||+.|++|+|+.||.++..++.....=..-... T Consensus 164 asyi~lPWWaG~alfG~l~~~~~vltl~ys~aGlGiaivndfksveGdr~lGlqslPv~fG~~ta~WiCv~~id~~q~~~ 243 (306) T TIGR02056 164 ASYIALPWWAGQALFGELTPDVVVLTLLYSLAGLGIAIVNDFKSVEGDRALGLQSLPVAFGIETAKWICVVAIDVTQLLV 243 (306) T ss_pred HHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHH T ss_conf 23432001311023111123566777788884122210110010122022030110034400002211135567888889 Q ss_pred HHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 9999835337999-99999999999999980899979999998764 Q gi|254780205|r 246 VAFCLLTVNFFAW-IGLLIALFLTIKRIIALDISCSKQCCSFFHSA 290 (310) Q Consensus 246 ~~~~~~~~~~~~~-~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n 290 (310) ..........+|- ....+.......|...+ .+||-+.--.+..+ T Consensus 244 a~yl~~~~~~~ya~~lv~liiPqi~fq~~yf-l~dP~k~dvkyqas 288 (306) T TIGR02056 244 AAYLLAIGKNLYALILVLLIIPQIVFQDKYF-LKDPLKYDVKYQAS 288 (306) T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHCCCCCCC T ss_conf 8888861340799999999720576644555-40402320000013 No 38 >PRK05951 ubiA prenyltransferase; Reviewed Probab=99.89 E-value=6.6e-22 Score=152.51 Aligned_cols=278 Identities=14% Similarity=0.124 Sum_probs=186.2 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 67789999863048531599899999999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) ++.|.|+.-+| |...-.-..|.+.|..+|....++ . ......++.+++.+...+.|..|||+|.+-+.-. T Consensus 2 ~~~k~~~~a~R---P~tl~asi~pv~lG~a~A~~~~g~---f----~~~~~ll~ll~~~l~q~~~Nl~NDY~D~~~G~D~ 71 (296) T PRK05951 2 TRDKEFFIQTR---PWSFVMTIISTSFGYSYGFYLIGS---F----DPLLSWAILLGCVLLHASANVLNDYFDYVLGIDT 71 (296) T ss_pred CCHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHCCC---C----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC T ss_conf 50889999967---037699999999999999997698---7----5999999999999999999985618888457756 Q ss_pred -CCCC--CHHHHCCCCCHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHHHHCC---C-CCCCCCCCCHHHH Q ss_conf -2343--10100123321011001344310003455----5444443210035654443116---6-5555433200101 Q gi|254780205|r 97 -LRTR--SRPLPSGQCTRFQALVFAVLQFLISFVLL----LQFNPFVICVGFALLFISLLYP---F-SKRFILCPQVVLG 165 (310) Q Consensus 97 -~RT~--~RPl~sG~is~~~A~~~~~~l~~l~~~~~----~~ln~~~~~l~~~~~~~~~iYp---~-~KR~t~~p~~~lG 165 (310) +|.. .|++.+|.+|+++....++.+..+++.+. ...++....++..+.+..+.|+ + .|+ ..++.+..+ T Consensus 72 ~~~~~~~~~~i~~g~ls~~~v~~~~~~~~~~a~~~G~~L~~~~~~~~l~lg~~g~~~~~~YTggP~~l~y-~gLGel~v~ 150 (296) T PRK05951 72 RETTGYRPHPIIAGIMSLGNVRVLGIALGCIALQLGGALFLDRRPLAVLLALLGVFLLYCYMGPPFNLKY-RALGELLVF 150 (296) T ss_pred CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCHHHHH T ss_conf 7667888536883797899999999999999999999999985599999999999999998179976656-661079999 Q ss_pred HHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH Q ss_conf 00145-66301114575432024688888742100357998887531000257203466542020466653378999999 Q gi|254780205|r 166 IGFAG-GVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCF 244 (310) Q Consensus 166 ~~~~~-~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~ 244 (310) ++++. ++..++-..+|+++..+++..+..-+.+..--.+.-+.|+|+|+++|.+|+|+++|++................ T Consensus 151 i~fG~l~v~g~~y~qtg~~~~~~~l~s~p~gll~~~IL~~Nn~rD~e~D~~~Gk~Tl~v~lG~~~a~~~~~~l~~~~y~~ 230 (296) T PRK05951 151 IAWGHLMVLGLIYVWTGNISSPNVLAGVPLGLLVAAVLLANNLRDIEDDERLGAPTLAVIFGRKSAVALYAFALLSPYLI 230 (296) T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHH T ss_conf 99899999999999918776999999999999999999987862215499769976487867575999999999999999 Q ss_pred HHHHHHHCCCHHHHHHHHHHH---HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999998353379999999999---999999998089997999999876459999999999999865 Q gi|254780205|r 245 MVAFCLLTVNFFAWIGLLIAL---FLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFL 307 (310) Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~---~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL 307 (310) .......+.-+++-...++.. .-+..+...-..++ ...+.=|-|..+|.++.++++++.+. T Consensus 231 ~~~~~~~~~~p~~~ll~lltlPla~~l~~~~~~~~~~~--~~~~T~~l~~~fg~l~~~g~lls~l~ 294 (296) T PRK05951 231 LVILVIAILLPLISLWALLTLPVAYALCLWQSRKFPHD--ADPATAQIFMVFGYLYILGTLLSKLV 294 (296) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999986605999999999999999999997525455--53899999999999999999999872 No 39 >PRK12872 ubiA prenyltransferase; Reviewed Probab=99.89 E-value=3.4e-22 Score=154.23 Aligned_cols=224 Identities=12% Similarity=-0.031 Sum_probs=135.6 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCC----CCCCCHHHHHHHHH Q ss_conf 99999899999964138877843423431010012332101100134431000345554444----43210035654443 Q gi|254780205|r 73 GAIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNP----FVICVGFALLFISL 148 (310) Q Consensus 73 G~~~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~----~~~~l~~~~~~~~~ 148 (310) -+++.-.+|.++||+.|+|.|+.|+ ++|+...+++|.+.|..+...+...+....+..+. .....-........ T Consensus 54 ~~~l~~aagYiIN~~~D~e~D~IN~--P~r~~~~~~is~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (297) T PRK12872 54 ITFLLALSVYSINYLTDLDEDRINN--PERVEFLKKIGEKLAYNFFFLAVLGVYLGAYLSSVIMRPAFASIFILGIIYLY 131 (297) T ss_pred HHHHHHHHHHHHHHHCCHHHHHCCC--CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999998725640220311341479--86233101003999999999999999999999999998999999999999999 Q ss_pred HCC-CCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH Q ss_conf 116-65555433200101001456630-1114575432024688888742100357998887531000257203466542 Q gi|254780205|r 149 LYP-FSKRFILCPQVVLGIGFAGGVFV-GWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS 226 (310) Q Consensus 149 iYp-~~KR~t~~p~~~lG~~~~~~~l~-g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G 226 (310) +|+ .+||.....++..|...+.+++. +-.....+.+......+.-.++-+...|.+.+++|.|+|++.|+||+|+.+| T Consensus 132 ~Ys~~LK~ip~~gNl~va~l~a~~~~~~~i~~~~~~~~~~i~~~a~F~fl~~lireivkDi~di~GD~~~g~~TlPi~~G 211 (297) T PRK12872 132 LYKRRLKQIPLFKNLLVALVWGLSITILPVLYGGLATDSALLLVAAFAFLKNFVNTIVFDIKDIEGDRNSGLKTLPIILG 211 (297) T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECHHHH T ss_conf 98999863510889999999999999999999934300899999999999999999971575131548669831483523 Q ss_pred H-CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 0-20466653378999999999998353379999999999999999998089997999999876459999999999 Q gi|254780205|r 227 Y-QTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICL 301 (310) Q Consensus 227 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~i 301 (310) + +++..+..+.................+...+.............+...+.+++++... -++..-.+++.|+ T Consensus 212 ~~~tk~ii~~l~~~~~~~~~~l~~~~~~~~~~y~~~~~~~~l~~~~i~l~~a~~~~~y~~---l~~~lK~iil~Gv 284 (297) T PRK12872 212 KRRTLRFLTILNLLPLALLVLGVYTGVFPTGLYLLLFPLSAYVFFYIKITKADRKPLFLY---LSVDGEWVLLAGL 284 (297) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHH T ss_conf 588999999999999999999999988769999999999999999999998276678999---9999999999999 No 40 >PRK12324 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Provisional Probab=99.89 E-value=1.3e-21 Score=150.73 Aligned_cols=162 Identities=20% Similarity=0.245 Sum_probs=126.3 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf 67789999863048531599899999999985212343344564216999999999999998999999641388778434 Q gi|254780205|r 17 SAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQV 96 (310) Q Consensus 17 ~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~~~ 96 (310) +.+|+|++++|.|+.+...+++.|...+--.- +. ..+....+.++.-.++.|+..++||+.|+|-||++ T Consensus 2 ~~~~~~~~~lRp~qWiKN~lvf~p~~~~~~~~----------~~-~~~~~~~~~F~~F~l~aS~vYi~NDi~D~~~Dr~H 70 (288) T PRK12324 2 NLLAGYLKLLRPKQWIKNVFVFAAPIFAGRLL----------NL-EVLLKVLLAFVLFCLASSAVYLVNDIRDVEADRLH 70 (288) T ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC----------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 36999999969899999999999999805404----------78-99999999999999999999999837547520568 Q ss_pred CCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 23431010012332101100134431000345554444432100356544431166-55554332001010014566301 Q gi|254780205|r 97 LRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVFVG 175 (310) Q Consensus 97 ~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l~g 175 (310) ++.|+||+|||++|.++|..++.++..+++..++.+|+........-..+.+.|++ +||....-...++..|-.-+..| T Consensus 71 p~Kk~RPiASG~is~~~a~~~~~~l~~~~~~~~~~~~~~~~~~l~~Y~~l~~~YS~~LK~i~ilDv~~ia~gf~lRv~aG 150 (288) T PRK12324 71 PTKRFRPIASGVVSVSLAYILAVVLLVASLILAYLLSPKLALVLLVYLALNLAYSFKLKHQPVLDVFCIASGFVLRAIAG 150 (288) T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 35346855556746889999999999999999997579999999999999999999986599999999998999999987 Q ss_pred CCCCCCCCCHHHHHHH Q ss_conf 1145754320246888 Q gi|254780205|r 176 WGALHASFSWPAFFLC 191 (310) Q Consensus 176 ~~av~g~~~~~~~~L~ 191 (310) ..++. .+.+.|++. T Consensus 151 ~~~~~--i~~S~Wll~ 164 (288) T PRK12324 151 GVAIG--VPLSPWLLL 164 (288) T ss_pred HHHHC--CCCCHHHHH T ss_conf 98817--998899999 No 41 >PRK13387 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional Probab=99.89 E-value=2e-21 Score=149.53 Aligned_cols=279 Identities=12% Similarity=0.152 Sum_probs=182.6 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCC Q ss_conf 77899998630485315998999999999852123433445642169999999999999989999996413887--7843 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD--IDSQ 95 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d--iD~~ 95 (310) ++|.++|++| |..--.-+.|.+.|..++....++ ..+....++++++.+...+.+.+||++|.+ .|++ T Consensus 2 sl~~w~~~~R---p~tl~asv~PvllG~a~a~~~~~~-------f~~~~~ll~ll~~~~~qi~~N~~NDY~D~~~G~D~~ 71 (317) T PRK13387 2 SAKLFLKLVE---IHTKIASFFPVILGTLFSLYYVAK-------IDWLLFLAFMVAMLAFDIATTAINNYMDFKKALDTA 71 (317) T ss_pred CHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 7899999876---777899999999999999996698-------779999999999999999998766255650377875 Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCC----CCCCCCCCCCCHHHHHHHHHHCCCC-CCC--CCCCCHHHHHHH Q ss_conf 423431010012332101100134431000345----5544444321003565444311665-555--433200101001 Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVL----LLQFNPFVICVGFALLFISLLYPFS-KRF--ILCPQVVLGIGF 168 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~----~~~ln~~~~~l~~~~~~~~~iYp~~-KR~--t~~p~~~lG~~~ 168 (310) ..+.++|++.+|.+|+++....+..+..++..+ .+..++....++..+....+.|+.. ++. +.++.+..|+++ T Consensus 72 ~~~g~~~~i~~g~ls~~~v~~~~~~~~~~a~i~Gl~L~~~tg~~~l~iG~~~~~~~~~YT~gP~pl~y~glGEi~v~~~~ 151 (317) T PRK13387 72 DYVGIGNGIGQHGLKPKNVLTVILLMYVVAAILGVYLCMNTSWLLLVIGLICFAIGILYTGGPLPLSRMPLGEIFSGLTM 151 (317) T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH T ss_conf 44588860057997999999999999999999999999984379999999999997643279966477672279999998 Q ss_pred HHHHHHC-CCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH Q ss_conf 4566301-1145754320246--------------------888887421003579988875310002572034665420 Q gi|254780205|r 169 AGGVFVG-WGALHASFSWPAF--------------------FLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSY 227 (310) Q Consensus 169 ~~~~l~g-~~av~g~~~~~~~--------------------~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~ 227 (310) |..+..+ +-..+++.+...+ ...+...+.+..--.+.-+.|+|+|+|+|-+|+|++.|+ T Consensus 152 G~~~v~~~~yv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~slp~~ll~~~IL~~NN~rD~e~D~~~gk~TL~v~lG~ 231 (317) T PRK13387 152 GFGIFLLAVYINTNTITIESLLFQGEMFTIQGNLIAIIAIGVISLPIIFTIANIMLANNLRDLDEDIKNHRYTLVYYIGR 231 (317) T ss_pred HHHHHHHHHHEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECH T ss_conf 89998887413304454023311232000110036689999998889999999998565751366997698017989885 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHH----HHHHHHHHHHHHHHHHH Q ss_conf 2046665337899999999999835337999999999999999999808--99979999----99876459999999999 Q gi|254780205|r 228 QTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALD--ISCSKQCC----SFFHSAGVVGILILICL 301 (310) Q Consensus 228 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~--~~~~~~~~----k~Fk~n~~~g~ii~~~i 301 (310) +.......................+.-+++....++.........+.+. .++|++.. +.-+.|..+|.++.+++ T Consensus 232 ~~a~~~y~~l~~~ayl~ii~~v~~g~~p~~~ll~ll~~P~~~k~~~~~~~~~~k~~~~~~~~k~t~~~~~~~gll~~~g~ 311 (317) T PRK13387 232 EKGVVLFAVLFYASYLAIAVIVLMGYISPWALVSFLTLRKPISNIQSFQKEAKDPKYFRIAIKNTVLTNTTFGFLLSASL 311 (317) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 77999999999999999999999855239999999999999999999985699906899999999999999999999999 Q ss_pred HHHHH Q ss_conf 99986 Q gi|254780205|r 302 IISLF 306 (310) Q Consensus 302 ild~l 306 (310) +++++ T Consensus 312 ll~~l 316 (317) T PRK13387 312 LIQYL 316 (317) T ss_pred HHHHH T ss_conf 99862 No 42 >PRK13105 ubiA prenyltransferase; Reviewed Probab=99.85 E-value=2.4e-20 Score=143.06 Aligned_cols=264 Identities=19% Similarity=0.231 Sum_probs=157.6 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCC Q ss_conf 054677899998630485315998999999999852123433445642169999999999--999989999996413887 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVG--AIVTRGAACTWNDLVDHD 91 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G--~~~~r~ag~~~Nd~~D~d 91 (310) .+.+.+|.-+. .+||+-|.-..+|...|+++++..... .+....+++.- -.+|.| +||++|+| T Consensus 4 ~~~~~l~~l~~---~SRP~~Winta~p~~~g~~l~~~~~~~--------~~~~~~i~flvP~Nl~mYG----INDvfD~e 68 (291) T PRK13105 4 GMMELIRQILL---SSRPLSWVNTAYPFAAAYLLTAGEIDW--------LFWLGTVFFLIPYNLAMYG----INDVFDYE 68 (291) T ss_pred CHHHHHHHHHH---HCCCCCCCCCHHHHHHHHHHHCCCCCH--------HHHHHHHHHHHHHHHHHHC----CHHHHHHH T ss_conf 08899999998---468731103226899999997254558--------9999999999878888734----20333213 Q ss_pred CCCCCCCCCCHHHHCCCCCHH--HCCCHHHHHHHHHCCC-CC-CCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHH Q ss_conf 784342343101001233210--1100134431000345-55-4444432100356544431166-55554332001010 Q gi|254780205|r 92 IDSQVLRTRSRPLPSGQCTRF--QALVFAVLQFLISFVL-LL-QFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGI 166 (310) Q Consensus 92 iD~~~~RT~~RPl~sG~is~~--~A~~~~~~l~~l~~~~-~~-~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~ 166 (310) .|.+|+|...|+=+. +++. ...+.......+-++. +. ..++.+...-....++...|+. --|+..-| +.-++ T Consensus 69 sD~~NPRKgg~Ega~--l~~~~~r~~l~~~~~~~~pfl~~l~~~~~~~~~~~l~~~~f~~vaYSaPpLRFKe~P-~LDS~ 145 (291) T PRK13105 69 SDLRNPRKGGVEGAV--LPKASHRPLLWASAITTIPFLVVLVIAGTWMSWAVLAVSVFAVIAYSAAGLRFKERP-FLDAL 145 (291) T ss_pred HHCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCC T ss_conf 102388878866301--470015503599999866899999981778899999999999850258860346665-53211 Q ss_pred H----HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHHHHH Q ss_conf 0----14566301114575432024688888742100357998887531000257203466542-020466653378999 Q gi|254780205|r 167 G----FAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS-YQTKLWLFILYGIFV 241 (310) Q Consensus 167 ~----~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~~~~ 241 (310) + +-.+...|.+....+.+.+.|..-.+.++|.++-++.-|+||+|.||++|+.|+++.+| +.+.++...+|.++. T Consensus 146 ss~~~~v~pa~~~~~l~g~~~~~~~~~~~~a~~lW~masHaF~AvqDI~~DR~aGI~siAT~lGargt~~~a~~~y~~Aa 225 (291) T PRK13105 146 TSSTHFTSPALYGLTLAGATFTPALWIALGAFFLWGMASQAFGAVQDVVADREAGLSSIATVLGARGTVRLAVLLYLLAA 225 (291) T ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECHHHHHHHHHHHHHHHH T ss_conf 22115644899999980788881479999999999999877403356650143191323435421589999999999999 Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHH--HHHHHHHCCCCHHHH---HHHHHHHHH-HHHHHHHHH Q ss_conf 999999998353379999999999999--999998089997999---999876459-999999999 Q gi|254780205|r 242 LCFMVAFCLLTVNFFAWIGLLIALFLT--IKRIIALDISCSKQC---CSFFHSAGV-VGILILICL 301 (310) Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~i~~~~~~~~~~~---~k~Fk~n~~-~g~ii~~~i 301 (310) .++.. .++......+.....+ ....+++..+++++. +|.|-..++ .|.++..-+ T Consensus 226 ~l~~~------~~~P~~~aa~~~l~yl~~~~~~~~~~d~~~e~Anr~wr~fl~ln~~~G~vvt~~L 285 (291) T PRK13105 226 VLMLF------TPWPGWIAAILALPYILNAARFWNITDTDAEQANRGWKRFLWLNYLVGFVVTMLL 285 (291) T ss_pred HHHHH------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99985------6881899999999999987265047789988886679999999999999999999 No 43 >PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional Probab=99.83 E-value=9.9e-19 Score=133.17 Aligned_cols=282 Identities=15% Similarity=0.082 Sum_probs=175.7 Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 10546778999986304853159989999999998521234334456421699999999999999899999964138877 Q gi|254780205|r 13 CIMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDI 92 (310) Q Consensus 13 ~~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~di 92 (310) .+-|++.|.+++-+| |...-.-+.|.+.|..+|..... ........++.+++.+...+.|.+||++|.+- T Consensus 6 ~~~~s~~k~W~~A~R---P~tL~as~~PvlvG~alA~~~~g-------~f~~~~~ll~ll~~~llqi~~Nl~NDY~D~~~ 75 (304) T PRK07419 6 SMSPSRRKLWKAAIK---PPMYSVAIMPILVGTAWALGEGG-------VFRLDQFIGFLLAAILILAWENLSNDVFDAET 75 (304) T ss_pred CCCCCHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 889748999999877---63789999999999999998589-------86699999999999999999998751546525 Q ss_pred --CCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHHHHCCC-CCCC--CCCCCHH Q ss_conf --8434234310100123321011001344310003455----54444432100356544431166-5555--4332001 Q gi|254780205|r 93 --DSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLL----LQFNPFVICVGFALLFISLLYPF-SKRF--ILCPQVV 163 (310) Q Consensus 93 --D~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~----~~ln~~~~~l~~~~~~~~~iYp~-~KR~--t~~p~~~ 163 (310) |+.. .++..+..-++++....+.....++.... ..-++....++..+.+..+.|+- -+|. ..+..+. T Consensus 76 G~D~~~----~~~~~~~~~~~~~v~~~~~~~l~~~~~~g~~l~~~~g~~ll~lg~~~~~~~~~Yt~~P~~l~y~glGe~~ 151 (304) T PRK07419 76 GIDVNK----FHSVVNLTGNRSLVFWLANLFLLLGLLGILAIALQSDWTVLALVLLCCFLGYLYQGPPFRLGYQGLGEPL 151 (304) T ss_pred CCCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH T ss_conf 887566----7887677788899999999999999999999984544999999999999988636898467766502799 Q ss_pred HHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHH Q ss_conf 0100145-663011145754320246888887421003579988875310002572034665420204666533789999 Q gi|254780205|r 164 LGIGFAG-GVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVL 242 (310) Q Consensus 164 lG~~~~~-~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~ 242 (310) .++.+|. ++...+-..+++.++.++...+..-+.+..--.+.-++|+|.|+++|-++++|++|++.............. T Consensus 152 v~~~fG~l~v~g~~y~q~~~~~~~~~~~s~~~gll~~~iL~~Nn~rD~e~D~~~gk~Tl~v~lG~~~a~~~~~~l~~~~y 231 (304) T PRK07419 152 CWLAFGPLATAAALYSQTPSWSLIPWAASLILGLATTLILFCSHFHQVEDDLAAGKRSPVVRLGTARGAQLLPWFVGLIY 231 (304) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHH T ss_conf 99998799999999998285559999999999999999999766741131797598505778771889999999999999 Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHH---H-HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9999999835337999999999999999999808--99979999---9-98764599999999999998652 Q gi|254780205|r 243 CFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALD--ISCSKQCC---S-FFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~--~~~~~~~~---k-~Fk~n~~~g~ii~~~iild~lL~ 308 (310) .........+.-+++-...++.........+.++ .++|+.-. + .=|.+...|.++.++++++.+++ T Consensus 232 ~~~~~~~~~g~~p~~~ll~ll~lPla~~~~~~v~~~~~~p~~l~~~~~~t~~~~~l~giLl~iGllls~ll~ 303 (304) T PRK07419 232 ALELLPVLLGFWPWTTLLSLISLPFAIALIRLVRRNHDQPERISNSKFLAVRFQFLSGLLLSLGLILAYLLP 303 (304) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 999999997051699999999999999999999984898999987899999999999999999999996637 No 44 >PRK08238 hypothetical protein; Validated Probab=99.82 E-value=2.9e-19 Score=136.39 Aligned_cols=169 Identities=21% Similarity=0.260 Sum_probs=129.4 Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 54677899998630485315998999999999852123433445642169999999999999989999996413887784 Q gi|254780205|r 15 MGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 15 ~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~diD~ 94 (310) -+.++|+|++.+|.|+.+...+++.|.+.+--+. +.. .+....+.++.-.+..|+..++||+.|+|-|| T Consensus 189 ~~~~~~~~lk~lRphQW~KNllvF~Pl~~a~~~~----------~~~-~~~~~~~aF~~Fsl~ASsvYi~NDl~D~e~DR 257 (481) T PRK08238 189 APPSLRTWLKALRVHQWLKNLLVFVPLLAAHDFG----------DLQ-AVLAALLAFLAFSLCASAVYILNDLLDLEADR 257 (481) T ss_pred CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC----------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 9867999999869899988689999998724205----------899-99999999999999996989886086787541 Q ss_pred CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH Q ss_conf 3423431010012332101100134431000345554444432100356544431166-555543320010100145663 Q gi|254780205|r 95 QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGIGFAGGVF 173 (310) Q Consensus 95 ~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~~~~~~~l 173 (310) +.+|.|+||++||++|.++|...+.++..+|+.+.+.+|+....+......+...|++ +||....-...++.-|.+-++ T Consensus 258 ~Hp~Kr~RP~ASG~ls~~~~~~~~~~ll~~~~~~a~~~~~~f~~~l~~Y~~lt~~YS~~LK~i~iiDv~~la~~f~lRii 337 (481) T PRK08238 258 AHPRKRRRPFASGALPIPFGLAAAPVLLLAALALALALSPAFLLVLLAYLVLTLAYSLRLKRKALIDVLTLAGLYTLRII 337 (481) T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH T ss_conf 68624569777788898899999999999999999996799999999999999999999754267589999989999998 Q ss_pred HCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 01114575432024688888742 Q gi|254780205|r 174 VGWGALHASFSWPAFFLCIGTIF 196 (310) Q Consensus 174 ~g~~av~g~~~~~~~~L~~~~~~ 196 (310) .|..|+ +++.+.|++....++ T Consensus 338 aG~~a~--~i~~S~WLl~fs~f~ 358 (481) T PRK08238 338 AGAVAV--GVALSFWLLAFSMFF 358 (481) T ss_pred HHHHHC--CCCCCHHHHHHHHHH T ss_conf 526230--778749999999999 No 45 >PRK12875 ubiA prenyltransferase; Reviewed Probab=99.82 E-value=4e-19 Score=135.55 Aligned_cols=258 Identities=17% Similarity=0.192 Sum_probs=156.7 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 9863048531599899999999985212343344564216999999999--99999899999964138877843423431 Q gi|254780205|r 24 YLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIV--GAIVTRGAACTWNDLVDHDIDSQVLRTRS 101 (310) Q Consensus 24 ~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~--G~~~~r~ag~~~Nd~~D~diD~~~~RT~~ 101 (310) +|.+.+||+-|.-...|...|+.+++......-. +......+++. .-.+|.| +||++|+|.|.+|+|.-. T Consensus 10 ~Ll~~SRP~~WvnTagp~~~g~~la~~~~~~~~~----~~~~~~~i~Fl~PyNllmYG----INDvfD~esD~~NPRKGG 81 (281) T PRK12875 10 YLFRLSRPRFWLYLGGPVVVGVAYGATTVGELFS----PAAVLLFLYFLFPANIFLYG----VNDWFDADTDETNPKKDG 81 (281) T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCC----HHHHHHHHHHHHHHHHHHHC----CCHHHHHHHCCCCCCCCC T ss_conf 9999667068886130899999995566134428----89999999998777788734----423332121034887667 Q ss_pred HHHHCCCCCHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHH---HHHHHHHHCC Q ss_conf 01001233210110013443-1000345554444432100356544431166-55554332001010---0145663011 Q gi|254780205|r 102 RPLPSGQCTRFQALVFAVLQ-FLISFVLLLQFNPFVICVGFALLFISLLYPF-SKRFILCPQVVLGI---GFAGGVFVGW 176 (310) Q Consensus 102 RPl~sG~is~~~A~~~~~~l-~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~~lG~---~~~~~~l~g~ 176 (310) |. |+...+....-.+.. ..+.+..+..++..+........++...|+. --|+..-|-+ -++ .+..|...|+ T Consensus 82 ~E---~~~~~~~~~~~~v~~~~~~~~~f~l~~~~~~~~~l~~~~f~~~~YSappLRFKerP~L-DS~Sn~~yv~P~v~~~ 157 (281) T PRK12875 82 RE---VRYRGDAAVAAIVVLTGALSLLFLAPLPLAGWPYLLAFLFLSYEYSAPPLRFKTTPVL-DSLSNGLYILPGIAAY 157 (281) T ss_pred CC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHHHHH T ss_conf 33---3457874457999998799999998503889999999999998613885255665030-0002023650699999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHCCCH Q ss_conf 14575432024688888742100357998887531000257203466542-02046665337899999999999835337 Q gi|254780205|r 177 GALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS-YQTKLWLFILYGIFVLCFMVAFCLLTVNF 255 (310) Q Consensus 177 ~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 255 (310) +.++|+.+ ++..-.+.++|.++-++.-|.||+|.||++|+.|+|+..| ++|..+...++.++..++.....-.+.- T Consensus 158 al~~g~~p--~~~~l~a~~lW~ma~HaF~AvqDI~~DR~aGI~T~AT~LGar~T~~~~~~~wl~aa~~~~~~~~p~~~~- 234 (281) T PRK12875 158 ALASGALP--PLAAVAAGWLWAMGMHTFSAIPDIEPDRAAGIQTTATFLGRRRALAYCAGCWLLAAAVFAFVDVPFSLL- 234 (281) T ss_pred HHHCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHH- T ss_conf 98526775--199999999999998773445777401332840000144433689999999999999996036308999- Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHH Q ss_conf 999999999999999999808999799999987-645999999999999 Q gi|254780205|r 256 FAWIGLLIALFLTIKRIIALDISCSKQCCSFFH-SAGVVGILILICLII 303 (310) Q Consensus 256 ~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~Fk-~n~~~g~ii~~~iil 303 (310) ......+...+...+ -+.++.++.|- -|...|++++++.+- T Consensus 235 ------~l~yp~~~~~~~~~~-~~~~ray~~fpaiN~~~G~~~tl~~lw 276 (281) T PRK12875 235 ------LLIYPVLVFAILLLG-IAIDRAYWWYPAVNTAVGMLLTLGALW 276 (281) T ss_pred ------HHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ------999999999996165-423368999899998999999999999 No 46 >COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism] Probab=99.80 E-value=1.1e-17 Score=126.75 Aligned_cols=282 Identities=15% Similarity=0.126 Sum_probs=186.0 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-- Q ss_conf 054677899998630485315998999999999852123433445642169999999999999989999996413887-- Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD-- 91 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d-- 91 (310) ...++.+.++|++| |...-.-+.|.+.|..+|..... ...++...++++++.+....-+.+|||.|.+ T Consensus 3 ~~~~~~~~wl~~~r---P~Tl~aai~Pv~~G~a~A~~~~~-------~f~~~~~ll~Li~~~~iq~~vN~~NdY~D~~KG 72 (303) T COG1575 3 QKTSKTQLWLELAR---PKTLPAAIAPVIVGTALAFWYGK-------SFNLLVALLALIAAILLQILVNLANDYFDYKKG 72 (303) T ss_pred CCCHHHHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 56179999998648---64017889999999999999746-------538999999999999999999987762234227 Q ss_pred CCC--CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHHHHCCC-CCCCCCCC--CH Q ss_conf 784--342343101001233210110013443100034555----4444432100356544431166-55554332--00 Q gi|254780205|r 92 IDS--QVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL----QFNPFVICVGFALLFISLLYPF-SKRFILCP--QV 162 (310) Q Consensus 92 iD~--~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~----~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p--~~ 162 (310) .|. ...+++++-+.+++++++.++.+...+...+..+.. ..|+..+.++..+....+.|+. -|+..+.| .+ T Consensus 73 ~D~~g~~~~~~~g~I~~~~~k~~~~l~l~l~~~~g~~llg~~~~~~s~~~~l~lG~l~~~~g~~YTgGp~PlgY~gLGEi 152 (303) T COG1575 73 TDTHGPDRLKQSGLIVRQSMKPALILSLALFLLAGLALLGVILAALSDWLVLLLGLLCIAAGILYTGGPFPLGYMGLGEI 152 (303) T ss_pred CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHH T ss_conf 78898741246654313458888999999999999999999999974469999999999730101369967466778899 Q ss_pred HHHHHHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC-HHHHHHHHHHHH Q ss_conf 10100145663-0111457543202468888874210035799888753100025720346654202-046665337899 Q gi|254780205|r 163 VLGIGFAGGVF-VGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQ-TKLWLFILYGIF 240 (310) Q Consensus 163 ~lG~~~~~~~l-~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~-~~~~i~~~~~~~ 240 (310) ..|+++|+-.. ..+-.-++++++..+...+.+.+-+..--...-+.|+|+|+|+|-+|+|++.|++ .+.....++... T Consensus 153 ~~~vffG~l~v~g~~yiqt~~~~~~~ll~slp~gil~~~Il~aNNirDie~D~~~gk~TLavrLG~~~~~~l~~~l~~~a 232 (303) T COG1575 153 FVGVFFGPLIVLGAYYIQTGRLSWAILLPSLPVGILIANILLANNLRDIEEDIRNGKYTLAVRLGRKNARKLYAALLVVA 232 (303) T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH T ss_conf 99999989999999999616410898999999999999999862133450178669601134625475899999999999 Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC-HH----HHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 999999999835337999999999999999999808999-79----9999987645999999999999986 Q gi|254780205|r 241 VLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISC-SK----QCCSFFHSAGVVGILILICLIISLF 306 (310) Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~-~~----~~~k~Fk~n~~~g~ii~~~iild~l 306 (310) ..+...........+.. ....+.....+...+.+..++ +. .+...=+.|...+.+++++++++.+ T Consensus 233 ~l~~~~~~i~~~~~~~~-ll~ll~~Pl~ir~~r~v~~~~~~~~~~p~l~~~~~~~~~~~~l~~~~i~~~~l 302 (303) T COG1575 233 YLAIVIFVILGLFPVWG-LLFLLALPLAIRAARPVRQNQVPATLVPMLKNTVKANLLWNLLLAVGILLSQL 302 (303) T ss_pred HHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999996221799-99999999999999999861683477799999999999999999999999963 No 47 >PRK13595 ubiA prenyltransferase; Provisional Probab=99.78 E-value=1.6e-18 Score=131.93 Aligned_cols=273 Identities=19% Similarity=0.140 Sum_probs=159.4 Q ss_pred HHHCCCHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHH Q ss_conf 5410546778-99998630485315998999999999852123433445642169999999999--99998999999641 Q gi|254780205|r 11 RDCIMGSAIA-PYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVG--AIVTRGAACTWNDL 87 (310) Q Consensus 11 ~~~~~~~~i~-~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G--~~~~r~ag~~~Nd~ 87 (310) +.|..|+.+. +--+|.+.+||+-|.-...|...|+++++.... . ....+.+++.- -.+|.| +||+ T Consensus 8 ~~~~~~~~~~~~Lr~L~~~SRP~~WinTa~p~~~g~~l~g~~~~------~--~~v~l~i~fl~PyNl~mYG----INDv 75 (298) T PRK13595 8 MMRIAPSGIGLPLRRLLLISRPVLWINTIGSGVVGVWLTGHLFT------L--GVLPLLLWLTLPFNLLIYG----LNDI 75 (298) T ss_pred HHHCCCCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCC------H--HHHHHHHHHHHHHHHHHHC----CCHH T ss_conf 87328864517899999845742333005689999999725477------8--9999999999887888744----4212 Q ss_pred CCCCCCCCCCCCCCHHHHCCCCCHHHC--CCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCH Q ss_conf 388778434234310100123321011--00134431000345--554444432100356544431166-5555433200 Q gi|254780205|r 88 VDHDIDSQVLRTRSRPLPSGQCTRFQA--LVFAVLQFLISFVL--LLQFNPFVICVGFALLFISLLYPF-SKRFILCPQV 162 (310) Q Consensus 88 ~D~diD~~~~RT~~RPl~sG~is~~~A--~~~~~~l~~l~~~~--~~~ln~~~~~l~~~~~~~~~iYp~-~KR~t~~p~~ 162 (310) +|+|.|.+|+|..... -.++++++. .+.+.....+-+++ +...++.+...-....++.+-|+. --|+..-|-+ T Consensus 76 fD~esD~~NPRKGg~E--Ga~l~~~~~r~~l~a~~~~~~pf~~~l~~~~~~~~~~~L~~~~~~~~aYSappLRFKerP~L 153 (298) T PRK13595 76 ADQETDAANPRKGSWE--GARIRPGEVRPIARAVLLLNAPFLLYFALVLPPAANAALLLYAAVFVGYSLPPLRFKARPFL 153 (298) T ss_pred HHHHHCCCCCCCCCCC--CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC T ss_conf 2212014588756745--50344023661238999970589999998468889999999999998404885345666552 Q ss_pred HHHH---HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHH Q ss_conf 1010---014566301114575432024688888742100357998887531000257203466542-020466653378 Q gi|254780205|r 163 VLGI---GFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFS-YQTKLWLFILYG 238 (310) Q Consensus 163 ~lG~---~~~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~ 238 (310) -++ .+..++..+..+.++. +++..-.+.++|.++-++.-|.||+|.||++|+.|+|+.+| +.|..+...++. T Consensus 154 -DS~sn~~y~~p~~~~~lalg~~---~~~~al~a~~lW~ma~HaF~AvqDI~~DR~AGI~T~AT~lGaRgT~~~~~~~~l 229 (298) T PRK13595 154 -DSLSNAAYALPLVLVPLALGAP---PVWPALLGLMAWSVAKHAFDAVQDIVEDREAGIRTVAVRLGVRGTALWSGAWWI 229 (298) T ss_pred -CHHCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHHHH T ss_conf -0120045767899999980588---428999999999999877344566740033385123435430589999999999 Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH---HHHH-HHHHHHHHHHHHHHHHHHHHC Q ss_conf 9999999999983533799999999999999999980899979999---9987-645999999999999986521 Q gi|254780205|r 239 IFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCC---SFFH-SAGVVGILILICLIISLFLDQ 309 (310) Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~---k~Fk-~n~~~g~ii~~~iild~lL~~ 309 (310) ++..++...... .......+...+...+ .+.+++++.. +.|- .|-..|.+..+-++.+....+ T Consensus 230 lA~~l~~~~~~p-----~a~~~~~~~~~~~~~~---~~d~~~e~A~r~wr~fla~n~v~G~v~~~lLi~~l~~g~ 296 (298) T PRK13595 230 LAGALFAPVSRP-----VAAALWAIAGGLALAL---LRRPRPETGHRLYRLSIAFPYIAGTVAGVLLVYALARGG 296 (298) T ss_pred HHHHHHHCCCHH-----HHHHHHHHHHHHHHHH---HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 999998365227-----8999999999999999---728986777413413453777999999999999998157 No 48 >TIGR02235 menA_cyano-plnt 1,4-dihydroxy-2-naphthoate phytyltransferase; InterPro: IPR011937 This family of phytyltransferases, found in plants and cyanobacteria, are involved in the biosythesis of phylloquinone (Vitamin K1). Phylloquinone is a critical component of photosystem I . The closely related MenA enzyme from bacteria transfers a prenyl group (which only differs in the saturation of the isoprenyl groups) in the biosynthesis of menaquinone. Activity towards both substrates in certain organisms should be considered a possibility.. Probab=98.73 E-value=5.7e-07 Score=61.61 Aligned_cols=249 Identities=18% Similarity=0.168 Sum_probs=134.9 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCHHHHCCCCCHHHC Q ss_conf 8999999999852123433445642169999999999999989999996413887--78434234310100123321011 Q gi|254780205|r 37 AVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD--IDSQVLRTRSRPLPSGQCTRFQA 114 (310) Q Consensus 37 l~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D~d--iD~~~~RT~~RPl~sG~is~~~A 114 (310) -+.|-..|...+-.... ..-.+.+.+|.+++.+.-.-=|-=||++|-| ||+ -|---++.=.=+++.. T Consensus 14 Av~Pi~~g~A~a~~~~g-------~~~~~~f~~FL~aaililaW~NLtNDvFDs~TGiD~----~K~HS~V~LTG~r~lv 82 (293) T TIGR02235 14 AVMPILVGTAVALGKGG-------VVHLDRFVLFLIAAILILAWINLTNDVFDSDTGIDR----FKLHSIVNLTGSRSLV 82 (293) T ss_pred HHHHHHHHHHHHHHCCC-------CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC----CCCCCEEEECCCHHHH T ss_conf 89988999899987077-------300488999999999999998406762124567551----0144435641640689 Q ss_pred CCHHHHHHHHHCCCCCCCCC-----CCCCCHHHHHHHHHHC---CCCCCCCCCC--CHHHHHHHH-HHHHHCCCCCCC-- Q ss_conf 00134431000345554444-----4321003565444311---6655554332--001010014-566301114575-- Q gi|254780205|r 115 LVFAVLQFLISFVLLLQFNP-----FVICVGFALLFISLLY---PFSKRFILCP--QVVLGIGFA-GGVFVGWGALHA-- 181 (310) Q Consensus 115 ~~~~~~l~~l~~~~~~~ln~-----~~~~l~~~~~~~~~iY---p~~KR~t~~p--~~~lG~~~~-~~~l~g~~av~g-- 181 (310) ...+-+.+.+|.+....+.. ..+.+...+.++...| || |-.+.. ..+=-+||| ++...++-+.++ T Consensus 83 ~~~~n~~Ll~Gl~~i~~ls~~~~D~~Vl~Lv~~~cfLGY~YQGPPF--RLGY~GLGEpiC~~~FGPlA~AAA~~~q~~~~ 160 (293) T TIGR02235 83 FWLANFFLLIGLVGIAALSWRSQDITVLALVGLCCFLGYLYQGPPF--RLGYQGLGEPICWLAFGPLAIAAALYAQSQSV 160 (293) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 9999999999999999998886238999999999997530378742--44410313899998750899999998726552 Q ss_pred -CCCHHHHHHHH----HHHHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHCC Q ss_conf -43202468888----87421003579988--87531000257203466542-020466653378999999999998353 Q gi|254780205|r 182 -SFSWPAFFLCI----GTIFWVVYFDTVYA--HQDKKDDELIGVNSTARLFS-YQTKLWLFILYGIFVLCFMVAFCLLTV 253 (310) Q Consensus 182 -~~~~~~~~L~~----~~~~Wt~~~dtiYa--~~D~edD~k~GikSlav~~G-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 253 (310) +.+..+|.-.+ +.-.||.- ..|+ .--+|||+++|=||-=|++| ++..+.+. ..+.......+.....|+ T Consensus 161 ~~~~~~~w~~~i~~G~G~~~~Ttl--iLFCsHFHQv~dD~a~GK~sP~VRLGt~~~A~~~~-w~~~~~Y~~~~~~v~~G~ 237 (293) T TIGR02235 161 ISFSLIPWKAAILVGAGSALATTL--ILFCSHFHQVEDDLAHGKRSPVVRLGTKRAAKIVP-WVILLLYVVLLIAVIGGF 237 (293) T ss_pred CEEEHHHHHHHHHHCCCHHHHHHH--HHHHHCCCCHHHHHHCCCCCCEEECCHHHHHHHHH-HHHHHHHHHHHHHHHHHH T ss_conf 023113578788843716899999--99842346416787438988721013555888999-999999999999998626 Q ss_pred CHHHHHHHHHHH---HHHHHHHHHHCCCCHHHH--HH--HHHHHHHHHHHHHHHHH Q ss_conf 379999999999---999999998089997999--99--98764599999999999 Q gi|254780205|r 254 NFFAWIGLLIAL---FLTIKRIIALDISCSKQC--CS--FFHSAGVVGILILICLI 302 (310) Q Consensus 254 ~~~~~~~~l~~~---~~l~~~i~~~~~~~~~~~--~k--~Fk~n~~~g~ii~~~ii 302 (310) -++--...+.+. ..++....... ++||.- .| +-|...+=|+.+.+|.. T Consensus 238 ~P~~~LL~l~s~P~A~~Li~~~~~~h-~~P~~i~n~KFiA~~fh~~sG~lL~~G~~ 292 (293) T TIGR02235 238 LPWTTLLALASLPWAVKLIRLLKQNH-NKPEQIKNSKFIAVRFHFLSGILLTLGLL 292 (293) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHCCHHHHHHHHHHHHHHHHHHHH T ss_conf 46999999960038999999998753-58504541379999999999999999973 No 49 >KOG4581 consensus Probab=98.70 E-value=1.8e-08 Score=70.79 Aligned_cols=278 Identities=14% Similarity=0.130 Sum_probs=147.2 Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCC Q ss_conf 778999986304853159989999999998521234334456421699999999999999899999964138--877843 Q gi|254780205|r 18 AIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVD--HDIDSQ 95 (310) Q Consensus 18 ~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~~D--~diD~~ 95 (310) |.+.|+--.| |-..--..-|++-|..++...-. ..+.......++ -.....+.+||+..|.++| +.||++ T Consensus 60 k~~syllalr---pws~sasl~p~~lgsalayrs~~---~~d~~l~~~fl~--a~avlavh~agnlvntyfdf~kgid~k 131 (359) T KOG4581 60 KCASYLLALR---PWSFSASLTPTALGSALAYRSHG---AEDFRLATFFLC--AFAVLAVHCAGNLVNTYFDFIKGIDHK 131 (359) T ss_pred HHHHHHHHHC---CCCCCCCCCHHHHHHHHHHHHCC---CCCHHHHHHHHH--HHHHEEEECCCCHHHHHHHHHHCCCCC T ss_conf 9987876316---44232333647666478776425---444168998887--755224411564235466665333333 Q ss_pred CCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCC---CCCCCCCC----CCCHHHHHHHHHHCCCCC--CCCCCCCHHHHH Q ss_conf 423431010012332101100134431000345---55444443----210035654443116655--554332001010 Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVL---LLQFNPFV----ICVGFALLFISLLYPFSK--RFILCPQVVLGI 166 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~---~~~ln~~~----~~l~~~~~~~~~iYp~~K--R~t~~p~~~lG~ 166 (310) -. .+|-++...+.+.+..-++.++..+|... +..++|.- ..+-+.++--.++|+-.- ++..+..++.=+ T Consensus 132 ka--ddrtlvd~il~~~dvv~~g~~ly~~gc~~~~~l~~lsp~klehlaliyfggls~sflytggigfkyialgdliili 209 (359) T KOG4581 132 KA--DDRTLVDHILEKDDVVRFGAFLYMAGCGCAACLAVLSPAKLEHLALIYFGGLSGSFLYTGGIGFKYIALGDLIILI 209 (359) T ss_pred CC--CCHHHHHHHCCHHHEEHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCEEEEE T ss_conf 44--3055888725831130134799970404899999578766435355210575543267546652787406789887 Q ss_pred HH-HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH Q ss_conf 01-45663011145754320246888887421003579988875310002572034665420204666533789999999 Q gi|254780205|r 167 GF-AGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFM 245 (310) Q Consensus 167 ~~-~~~~l~g~~av~g~~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~~~~~~i~~~~~~~~~~~~ 245 (310) .| ..+++.+++..+|++.+.++.-.+..-+-|-+.-.-....|.|.|+++|+-++++..|+....++... ....-. T Consensus 210 ~fgpiavlfaf~~q~g~l~~~~l~yaiplalnteailhsnntrd~dndr~agivtlailig~t~s~ily~~---llf~py 286 (359) T KOG4581 210 LFGPIAVLFAFAIQTGHLAIFPLGYAIPLALNTEAILHSNNTRDADNDREAGIVTLAILIGPTASHILYAM---LLFAPY 286 (359) T ss_pred EECHHHHHHHHHHHCCCEEEEEEHHEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH---HHHHHH T ss_conf 60519999999986286158761110110013577760588755434511472899976466388999999---999899 Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHH-HCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99998353379999999999999999998-08999--79999998764599999999999998652 Q gi|254780205|r 246 VAFCLLTVNFFAWIGLLIALFLTIKRIIA-LDISC--SKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~l~~~i~~-~~~~~--~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) ......+...-.+..+-....-+..|+.+ ++++. .+-.++.-|-|..+|+....++...+-++ T Consensus 287 ~lf~i~~~~~si~~~lplltip~afqiek~frneqa~~~lp~qtakln~~~gi~yv~~~~~ahqlp 352 (359) T KOG4581 287 LLFFIFALHCSISFALPLLTIPMAFQIEKQFRNEQAFHKLPQQTAKLNFFFGIFYVFACCCAHQLP 352 (359) T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 999999988899887477413267769998621766644406666688899999999999724477 No 50 >PRK13592 ubiA prenyltransferase; Provisional Probab=98.55 E-value=1.2e-05 Score=53.55 Aligned_cols=183 Identities=15% Similarity=0.232 Sum_probs=97.9 Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC-CC-CCCC--- Q ss_conf 996413887784342343101001233210110013443100034555444443210035654443116-65-5554--- Q gi|254780205|r 83 TWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYP-FS-KRFI--- 157 (310) Q Consensus 83 ~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp-~~-KR~t--- 157 (310) +.+|--|.|.|++.. ++||+|||+||++|-...+++..++.......+++.....- +..+|- +| |-|. T Consensus 64 IaDEFKDyE~D~ryr--p~RplPrG~VtlkdL~i~g~~~~ai~i~l~~lf~~~il~~~-----~v~iY~~LM~~eFF~~e 136 (299) T PRK13592 64 IADDFKDYETDRRLF--PHRALPSGRVKKKDLAIALSFIVAVSVLLNVLFMNNVGWFL-----FLYIYGTLMSFWFFKRD 136 (299) T ss_pred HHHHHCCHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-----HHHHHHHHHHHHHCCHH T ss_conf 875630466787508--77889867664999999999999999999999844458899-----99999999999974399 Q ss_pred CC-CCHHHHHHHHHH--HHH-----CC--CCCCCC-CCHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH Q ss_conf 33-200101001456--630-----11--145754-3202468----888874210035799888753100025720346 Q gi|254780205|r 158 LC-PQVVLGIGFAGG--VFV-----GW--GALHAS-FSWPAFF----LCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTA 222 (310) Q Consensus 158 ~~-p~~~lG~~~~~~--~l~-----g~--~av~g~-~~~~~~~----L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSla 222 (310) |. .+..+-+.--.+ +++ ++ ..-.+. .+.+.++ +|.....|.++.-+ ...||+..++ |=. T Consensus 137 wL~k~l~lylvSHm~Im~li~lyiisf~~~~~~lp~~~~~~~l~~~t~yf~gli~EI~RKi-----raPeeE~e~V-TYS 210 (299) T PRK13592 137 KIQNSLPLALVTHNPVMMILNLYTISFVCYKYNLPLLSLPTVLLAFTMYFPSLIWEVCRKI-----RAPKDETEYV-TYS 210 (299) T ss_pred HHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHC-----CCCCCCCCCC-EEE T ss_conf 8722642687661689999999999998860589875157999999997054449876222-----7984466770-120 Q ss_pred HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH Q ss_conf 65420-204666533789999999999983533799999999999999999980899979 Q gi|254780205|r 223 RLFSY-QTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSK 281 (310) Q Consensus 223 v~~G~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~ 281 (310) -.||. +...++...+..-...-.. ...+.+.+....+.+...++-+|-..+. ++|+ T Consensus 211 kLfG~kka~~~~~~l~~~d~~t~~~--l~~~~s~~~v~~l~~~~~w~~~~~~~f~-k~pt 267 (299) T PRK13592 211 KLFGYKKATRFIEVVTLLDILTNFA--LLWNISHVGVVVLVLNVIWMTVQFEQFI-KSPT 267 (299) T ss_pred HHCCCCCCEEEEEHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC T ss_conf 2204566147772899999999999--9987788999999998999630188871-4964 No 51 >PRK13591 ubiA prenyltransferase; Provisional Probab=98.30 E-value=4.3e-07 Score=62.35 Aligned_cols=153 Identities=23% Similarity=0.302 Sum_probs=74.4 Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCC-CC--CC--- Q ss_conf 9964138877843423431010012332101100134431000345554444432100356544431166-55--55--- Q gi|254780205|r 83 TWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPF-SK--RF--- 156 (310) Q Consensus 83 ~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~~~l~~~~~~~~~iYp~-~K--R~--- 156 (310) +.|+-.|-|-|+.|+ ++|-=..+++ .+.-+..-..+|..++.--.. ..+++......++|+- .| |+ T Consensus 76 tLdRald~eEDaiNr--~El~g~nk~i----gl~~sl~afl~g~~il~~~Gi--l~~~f~Pli~GylYSkgikigk~~~K 147 (304) T PRK13591 76 TLDRALDSEEDAVNR--KELIGSNKKI----GLAVSLLAFLIGTYILAREGM--LLLAFLPLITGYLYSKGIKIGKFALK 147 (304) T ss_pred EECCCCCCHHHCCCC--HHHCCCCCHH----HHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHEEEEECCCCEEEEEEEE T ss_conf 721122760210451--7650753102----499999999999999885632--75446556311022146123101588 Q ss_pred ----CCCCCHHHHHHHHHHHHHCCCCCC--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-C Q ss_conf ----433200101001456630111457--54-320246888887421003579988875310002572034665420-2 Q gi|254780205|r 157 ----ILCPQVVLGIGFAGGVFVGWGALH--AS-FSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSY-Q 228 (310) Q Consensus 157 ----t~~p~~~lG~~~~~~~l~g~~av~--g~-~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~GikSlav~~G~-~ 228 (310) --.-+++.|+++ |.+++-.+.. ++ ++....++|...-+ .....+|.+.|.|+|..+|+|++|+..|+ + T Consensus 148 LKgg~gvKniIVg~tW--g~~iA~l~~~~~~s~~~v~iVf~FFg~kl--FINS~V~DfkDVkGD~~AGIkTLP~~LG~~~ 223 (304) T PRK13591 148 LKGGLGVKNIVVGITW--GAFIAGLAGSYCGSMLPVVLVFLFFGVKL--FINSAIYDFKDIKGDTLAGIKTLPVSLGEQK 223 (304) T ss_pred ECCCCCCEEEEEEEEC--CCHHHHHHHHCCCCCCHHHHHHHHHHHHH--HHHHHHCCCHHCCCCHHCCCCCCCHHHCCHH T ss_conf 5277762048998751--32266653420256414578899998999--8752310021036644307000762316325 Q ss_pred HHHHHHHHHHHHHHHHHHH Q ss_conf 0466653378999999999 Q gi|254780205|r 229 TKLWLFILYGIFVLCFMVA 247 (310) Q Consensus 229 ~~~~i~~~~~~~~~~~~~~ 247 (310) |+..+...+...-..+..+ T Consensus 224 Tr~~L~~ihl~sh~vl~~a 242 (304) T PRK13591 224 TRNLLLGIHLFSHLVLGIA 242 (304) T ss_pred HHHHHHHHHHHHHHHHHHH T ss_conf 6649999999999999999 No 52 >TIGR00751 menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro: IPR004657 This membrane-associated enzyme converts 1,4-dihydroxy-2-naphthoic acid (DHNA) to demethylmenaquinone, a step in menaquinone biosynthesis. A key reaction in the biosynthesis of menaquinone involves the conversion of the soluble bicyclic naphthalenoid compound 1, 4-dihydroxy-2-naphthoic acid (DHNA) to the membrane-bound demethylmenaquinone .; GO: 0016740 transferase activity, 0009234 menaquinone biosynthetic process, 0016021 integral to membrane. Probab=96.16 E-value=0.097 Score=29.78 Aligned_cols=224 Identities=15% Similarity=0.116 Sum_probs=114.2 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCC-CCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCC---C--CCC---CCC Q ss_conf 9999999999899999964138877843-423-43101001233210110013443100034555---4--444---432 Q gi|254780205|r 68 FIYIVGAIVTRGAACTWNDLVDHDIDSQ-VLR-TRSRPLPSGQCTRFQALVFAVLQFLISFVLLL---Q--FNP---FVI 137 (310) Q Consensus 68 ~l~~~G~~~~r~ag~~~Nd~~D~diD~~-~~R-T~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~---~--ln~---~~~ 137 (310) .+...-+....-..+.-||+-|..-... .+| -+-|-+.+|.+++++...-......++..... . .+. ... T Consensus 33 ~~~~~~~~~~~~~~~~~~d~~d~~~g~d~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~ 112 (286) T TIGR00751 33 LLALLTAGLLQILSNLANDYGDGVKGSDKDDRIGPLRGVGKGLITPKELKWALILSLALGALSGLALVGLAAPNLADLFW 112 (286) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999987531000233467775101001343332101278889999999999988778999875445788999 Q ss_pred --CCHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-------HHHHHHHHHHHHHHHHHHHHHHH Q ss_conf --1003565444311665-5554332001010014566301114575432-------02468888874210035799888 Q gi|254780205|r 138 --CVGFALLFISLLYPFS-KRFILCPQVVLGIGFAGGVFVGWGALHASFS-------WPAFFLCIGTIFWVVYFDTVYAH 207 (310) Q Consensus 138 --~l~~~~~~~~~iYp~~-KR~t~~p~~~lG~~~~~~~l~g~~av~g~~~-------~~~~~L~~~~~~Wt~~~dtiYa~ 207 (310) .++...+.-...|+-. |.+.+.. .| -.+.-+..||.++.|+.- +....-..+.-.-...--.+... T Consensus 113 ~~~~g~~~~~~~~~~~~g~~p~g~~g---~g-~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 188 (286) T TIGR00751 113 FLGLGGLCIVGAWTYTGGSKPYGYAG---LG-DLSVLVFFGPLGVLGTWYLQAHTLDWAGLLPAVATGLLACAVLNINNL 188 (286) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCC---CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99987999998876521566444222---01-467777775566523455555433356776665544677777653211 Q ss_pred HHHHHHCCCCCHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH Q ss_conf 753100025720346654202-0466653378999999999998353379999999999999999998089997999999 Q gi|254780205|r 208 QDKKDDELIGVNSTARLFSYQ-TKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSF 286 (310) Q Consensus 208 ~D~edD~k~GikSlav~~G~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~i~~~~~~~~~~~~k~ 286 (310) +|.+.|+++|-.+++++.|+. .+.....+......+..........+++-+..++..-...-.........++.+.... T Consensus 189 ~d~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~ 268 (286) T TIGR00751 189 RDIPTDAKAGKNTLAVRLGDAKGRVYHCGLLAVAGVCLLLFALATPHSWWGWLFLLAAPLLLKAAGPVRCGRGPRELRPV 268 (286) T ss_pred HCCCCHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH T ss_conf 10220010241000011101334688999999999999999987678888999999888888654333204662357788 Q ss_pred HHHHHHHHH Q ss_conf 876459999 Q gi|254780205|r 287 FHSAGVVGI 295 (310) Q Consensus 287 Fk~n~~~g~ 295 (310) .+....... T Consensus 269 ~~~~~~~~~ 277 (286) T TIGR00751 269 LEDTGLGAL 277 (286) T ss_pred HHHHHHHHH T ss_conf 887789999 No 53 >TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein; InterPro: IPR011853 In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This entry describes such transporters, found in the archaea and in bacteria.. Probab=81.48 E-value=3.8 Score=20.09 Aligned_cols=177 Identities=19% Similarity=0.096 Sum_probs=82.1 Q ss_pred HHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHH Q ss_conf 99999998-999999641388778434234310100123321011001344310003455544-4443210035654443 Q gi|254780205|r 71 IVGAIVTR-GAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQF-NPFVICVGFALLFISL 148 (310) Q Consensus 71 ~~G~~~~r-~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~~~l-n~~~~~l~~~~~~~~~ 148 (310) +.|+++.+ |.|.-+||..= -+. |+..---|.+=-+.....|....... |..| .| .+ T Consensus 187 LFGafL~~~G~G~fF~D~a~-------------a~~-G~~~GGPAKvAV~sSal~G~~sGSsvANvVt--tG------~f 244 (681) T TIGR02123 187 LFGAFLEKSGVGKFFIDLAF-------------ALA-GKRRGGPAKVAVVSSALMGMISGSSVANVVT--TG------SF 244 (681) T ss_pred HHHHHHHHHHHHHHHHHHHH-------------HHH-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--HH------CC T ss_conf 99999998507899999999-------------983-7678995045787667887789999988885--20------00 Q ss_pred HCCCCCCCCCCCCHHHH-----HHHH--HHHHHCCCCC-----CCCC--C-----HHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 11665555433200101-----0014--5663011145-----7543--2-----0246888887421003579988875 Q gi|254780205|r 149 LYPFSKRFILCPQVVLG-----IGFA--GGVFVGWGAL-----HASF--S-----WPAFFLCIGTIFWVVYFDTVYAHQD 209 (310) Q Consensus 149 iYp~~KR~t~~p~~~lG-----~~~~--~~~l~g~~av-----~g~~--~-----~~~~~L~~~~~~Wt~~~dtiYa~~D 209 (310) .=|.|||.-+-|+.=++ .++| +||.||-+|- .|-. | ..|-+||...+++++..+.. -|- T Consensus 245 TIPlMKr~Gy~~~fAgAvEAaAS~GGQImPPiMGAAAFiMaef~gipY~~I~~aA~iPA~LYf~gv~~~Vh~eA~--k~g 322 (681) T TIGR02123 245 TIPLMKRAGYKPEFAGAVEAAASTGGQIMPPIMGAAAFIMAEFLGIPYTEIILAAIIPALLYFLGVFMQVHLEAK--KQG 322 (681) T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC T ss_conf 035676377797741666887860670123589999999999836789999999999999999999999989999--658 Q ss_pred HHHHCCCCCHHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHH Q ss_conf 3100025720346654202046665-337899999999999835-337999999999999999999 Q gi|254780205|r 210 KKDDELIGVNSTARLFSYQTKLWLF-ILYGIFVLCFMVAFCLLT-VNFFAWIGLLIALFLTIKRII 273 (310) Q Consensus 210 ~edD~k~GikSlav~~G~~~~~~i~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~l~~~i~ 273 (310) .++=.|+..|-++. |++.+..+. -.|.+..+.........+ .+..+-....+......-+.. T Consensus 323 l~G~~~~~lP~~~L--~~~~~~~lk~~~~~liPL~~Li~~L~~~~~s~~~AA~~~i~~~l~~~~~~ 386 (681) T TIGR02123 323 LKGLSKEELPLSQL--GRSPKKVLKAGWYLLIPLVILIYMLLVGEYSPIRAAFYSIAATLIVSLLS 386 (681) T ss_pred CCCCCCCCCCCCCC--CCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 99987103788877--75179998621404458999999984057427888899999999999987 No 54 >TIGR02840 spore_YtaF putative sporulation protein YtaF; InterPro: IPR014205 This entry represents YtaF, which represents a protein family identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome. The phylogenetic profile of the members matches the subset of the Firmicutes capable of forming endospores. These species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, and Geobacillus kaustophilus.. Probab=75.93 E-value=0.47 Score=25.62 Aligned_cols=46 Identities=26% Similarity=0.333 Sum_probs=27.8 Q ss_pred HCCCCCHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHHHHC Q ss_conf 012332101100134431000345-----5544444321003565444311 Q gi|254780205|r 105 PSGQCTRFQALVFAVLQFLISFVL-----LLQFNPFVICVGFALLFISLLY 150 (310) Q Consensus 105 ~sG~is~~~A~~~~~~l~~l~~~~-----~~~ln~~~~~l~~~~~~~~~iY 150 (310) -||.|+.+||+++++.|+.=++.. +.-+||....+.....=+.++| T Consensus 126 ~SG~I~~kEAllLG~ALsLDafGaGiGAsl~G~~p~~~~~~~~~~S~~fv~ 176 (215) T TIGR02840 126 KSGNITGKEALLLGIALSLDAFGAGIGASLLGLNPLATSILVAVMSFIFVS 176 (215) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH T ss_conf 886200899999999999999999899988611789999999999999999 No 55 >KOG1419 consensus Probab=73.67 E-value=3.6 Score=20.21 Aligned_cols=55 Identities=29% Similarity=0.482 Sum_probs=27.8 Q ss_pred CCCHHH---------HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH-HHHH--HHHHH Q ss_conf 485315---------9989999999998521234334456421699999999999-9998--99999 Q gi|254780205|r 29 HSSTGW---------HLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGA-IVTR--GAACT 83 (310) Q Consensus 29 ~kp~g~---------~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~-~~~r--~ag~~ 83 (310) +||+|| +++++-|+.=.++....-.+.........+.+..+.+.|. |.+| +|||. T Consensus 86 ERPrGWkaf~YH~~VFllVl~CLILsV~STi~e~~~~a~~~L~~LEiv~IV~Fg~EfivRlWSAGC~ 152 (654) T KOG1419 86 ERPRGWKAFLYHFFVFLLVLSCLILSVLSTIEEYEKLASGILYILEIVMIVFFGLEFIVRLWSAGCC 152 (654) T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 3777616879999999999999999986234787887777999999999999999999999753555 No 56 >PRK04214 rbn ribonuclease BN/unknown domain fusion protein; Reviewed Probab=72.94 E-value=5 Score=19.36 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=23.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHH Q ss_conf 999999999989999996413887784342343101001233210110013443100 Q gi|254780205|r 68 FIYIVGAIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLI 124 (310) Q Consensus 68 ~l~~~G~~~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l 124 (310) .+++.....+++.-.++|++++. + ++||.....+.-.-.+.++-++... T Consensus 107 ~L~~ta~~~l~tie~afN~Iw~v------~--~~R~~~~r~liy~~lltlgplllg~ 155 (411) T PRK04214 107 MLVVTLLMLLHTIEQTFNSIWRV------A--SARPWVTQFLVYWTVLTLGPLLLGA 155 (411) T ss_pred HHHHHHHHHHHHHHHHHHHHHCC------C--CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999998667------7--6671799999999999999999999 No 57 >TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily. This family belongs to a larger family of transporters of the sodium:solute symporter superfamily, TC 2.A.21. Members of this strictly bacterial protein subfamily are found almost invariably immediately downstream from a member of family TIGR03647. Occasionally, the two genes are fused. Probab=71.44 E-value=4.6 Score=19.56 Aligned_cols=18 Identities=17% Similarity=0.104 Sum_probs=8.9 Q ss_pred HHHHHHHHHHCCCCCCCC Q ss_conf 899999964138877843 Q gi|254780205|r 78 RGAACTWNDLVDHDIDSQ 95 (310) Q Consensus 78 r~ag~~~Nd~~D~diD~~ 95 (310) |....+.-|++++.+|.+ T Consensus 91 r~g~~T~pe~l~~Rf~s~ 108 (552) T TIGR03648 91 KFGKYTVPDFIGDRYYSN 108 (552) T ss_pred HCCCCCHHHHHHHHHCCC T ss_conf 879964699999884884 No 58 >COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Probab=65.23 E-value=9.7 Score=17.60 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=36.4 Q ss_pred CCCCCCCCCCHHHHCCCCCHHH-CCCHHHHHHHHHCCCCCCCCCCCCCCH--HHHHHHHHHCCCCCCCCCCC-----CHH Q ss_conf 7843423431010012332101-100134431000345554444432100--35654443116655554332-----001 Q gi|254780205|r 92 IDSQVLRTRSRPLPSGQCTRFQ-ALVFAVLQFLISFVLLLQFNPFVICVG--FALLFISLLYPFSKRFILCP-----QVV 163 (310) Q Consensus 92 iD~~~~RT~~RPl~sG~is~~~-A~~~~~~l~~l~~~~~~~ln~~~~~l~--~~~~~~~~iYp~~KR~t~~p-----~~~ 163 (310) -||.|+| |=++-|.+-..- .+.++...+..-+.+++.+|-..=-.+ ...-.+.-=||--+|=+++. |-+ T Consensus 88 sDr~npr---~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi 164 (448) T COG2271 88 SDRSNPR---YFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI 164 (448) T ss_pred CCCCCCC---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHC T ss_conf 1467875---4425879999999999862179999999999989885279837786899875854567468874544422 Q ss_pred HHHHHHHHHHH--CCCCCCC Q ss_conf 01001456630--1114575 Q gi|254780205|r 164 LGIGFAGGVFV--GWGALHA 181 (310) Q Consensus 164 lG~~~~~~~l~--g~~av~g 181 (310) +|.. .+++. |+.+-.+ T Consensus 165 GGal--~~~~~~la~~~~~~ 182 (448) T COG2271 165 GGAL--APLVALLAFFAFHG 182 (448) T ss_pred CCCH--HHHHHHHHHHHHCC T ss_conf 3505--79999999997542 No 59 >KOG2513 consensus Probab=58.85 E-value=5.8 Score=18.99 Aligned_cols=10 Identities=20% Similarity=0.624 Sum_probs=3.9 Q ss_pred HHHHHHHHHH Q ss_conf 9999999985 Q gi|254780205|r 39 LPCLWSTVLA 48 (310) Q Consensus 39 ~p~~~~~~la 48 (310) .|+.+|...- T Consensus 182 ~~a~~g~~~Y 191 (647) T KOG2513 182 VPAVFGILLY 191 (647) T ss_pred HHHHHHHHHH T ss_conf 8999857886 No 60 >KOG3976 consensus Probab=54.03 E-value=7.1 Score=18.43 Aligned_cols=23 Identities=30% Similarity=0.297 Sum_probs=18.3 Q ss_pred CCCCCCCCCCCCCCHHHHCCCCC Q ss_conf 38877843423431010012332 Q gi|254780205|r 88 VDHDIDSQVLRTRSRPLPSGQCT 110 (310) Q Consensus 88 ~D~diD~~~~RT~~RPl~sG~is 110 (310) .|-|-|..+..|+.||..-|++- T Consensus 32 k~~~~~~~~~~~P~~p~~pgKvr 54 (247) T KOG3976 32 KDPDRDLTNYPTPPRPEYPGKVR 54 (247) T ss_pred CCCCCCCCCCCCCCCCCCCCCCC T ss_conf 67777754477898899975323 No 61 >KOG1638 consensus Probab=53.51 E-value=16 Score=16.37 Aligned_cols=118 Identities=20% Similarity=0.282 Sum_probs=53.9 Q ss_pred CCCCCCHHHHCCCCCHHHCCCH------HHHHHHHHCCCCCCCCCCCCCCHHHHH--HH-HHHCCCCCCC-CCCCCHHH- Q ss_conf 4234310100123321011001------344310003455544444321003565--44-4311665555-43320010- Q gi|254780205|r 96 VLRTRSRPLPSGQCTRFQALVF------AVLQFLISFVLLLQFNPFVICVGFALL--FI-SLLYPFSKRF-ILCPQVVL- 164 (310) Q Consensus 96 ~~RT~~RPl~sG~is~~~A~~~------~~~l~~l~~~~~~~ln~~~~~l~~~~~--~~-~~iYp~~KR~-t~~p~~~l- 164 (310) .+||+.| ++++.|+.. .+-+...+..-.-.+++-.+..+...+ +. +++||+.-|. +..|-.+. T Consensus 43 ~~~~~~~------ip~~~aw~iqe~Paf~~pl~~~~~~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a 116 (257) T KOG1638 43 LNPTKTR------IPPRIAWFIQELPAFAIPLYSLFRGPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVA 116 (257) T ss_pred CCCHHCC------CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH T ss_conf 7601047------9933479986094888339986478765456437999999999998877520133379996479999 Q ss_pred -HHHHHH--HHHHC-CC---CCCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHCCCCCH Q ss_conf -100145--66301-11---4575432024688888742100------35799888753100025720 Q gi|254780205|r 165 -GIGFAG--GVFVG-WG---ALHASFSWPAFFLCIGTIFWVV------YFDTVYAHQDKKDDELIGVN 219 (310) Q Consensus 165 -G~~~~~--~~l~g-~~---av~g~~~~~~~~L~~~~~~Wt~------~~dtiYa~~D~edD~k~Gik 219 (310) +++|+. |.+.| |. ++..+-...-+-..++.++|.. .+|.+..--.+|++++=.|+ T Consensus 117 ~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP 184 (257) T KOG1638 117 LAIAFCTLNGTLQGLYLSHYQLYEDPWVTDIRFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIP 184 (257) T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC T ss_conf 99999985179999999760346688704599999999998775311010899998601789851268 No 62 >TIGR01137 cysta_beta cystathionine beta-synthase; InterPro: IPR005857 This model discriminates cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain from cysteine synthases. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid - the function of many of these enzymes is unproven.; GO: 0004122 cystathionine beta-synthase activity, 0019343 cysteine biosynthetic process via cystathionine, 0005737 cytoplasm. Probab=46.13 E-value=6.6 Score=18.62 Aligned_cols=14 Identities=36% Similarity=0.691 Sum_probs=11.5 Q ss_pred CCCHHHHHHHHHHC Q ss_conf 95102013555410 Q gi|254780205|r 1 MSQFFNFKWVRDCI 14 (310) Q Consensus 1 ~~~~~~~~~~~~~~ 14 (310) |+||||++|+.|.- T Consensus 318 mtK~~nD~Wl~~~G 331 (527) T TIGR01137 318 MTKFLNDEWLLDNG 331 (527) T ss_pred HHHEECHHHHHHCC T ss_conf 10010437886458 No 63 >TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative; InterPro: IPR011744 This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme .. Probab=44.53 E-value=22 Score=15.51 Aligned_cols=45 Identities=29% Similarity=0.561 Sum_probs=27.5 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 3159989999999998521234334456421699999999999999899999964 Q gi|254780205|r 32 TGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWND 86 (310) Q Consensus 32 ~g~~ll~~p~~~~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd 86 (310) +|+- ..+|++.|+.+....-.+. .+..-|+|.+.++|. .+|| +|- T Consensus 48 iGWs-vAIPTLlG~A~GiWlD~hy----Ps~fSWTLtmli~Gv----~~GC-LNA 92 (100) T TIGR02230 48 IGWS-VAIPTLLGVALGIWLDKHY----PSSFSWTLTMLIVGV----VVGC-LNA 92 (100) T ss_pred HHHH-HHHHHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHH----HHHH-HHH T ss_conf 8899-9988899998733211468----987038999999999----8744-325 No 64 >TIGR00908 2A0305 ethanolamine permease; InterPro: IPR004757 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related , , . These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment.. Probab=43.87 E-value=22 Score=15.44 Aligned_cols=10 Identities=30% Similarity=0.524 Sum_probs=6.5 Q ss_pred CCHHHHCCCC Q ss_conf 3101001233 Q gi|254780205|r 100 RSRPLPSGQC 109 (310) Q Consensus 100 ~~RPl~sG~i 109 (310) .|.|||.--- T Consensus 262 ~n~Plp~al~ 271 (456) T TIGR00908 262 SNDPLPEALE 271 (456) T ss_pred CCCCHHHHHH T ss_conf 6897789999 No 65 >PRK03545 sugar efflux transporter; Provisional Probab=39.77 E-value=26 Score=15.05 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=7.7 Q ss_pred HCCCCHHHHHHHHHHHHHHHH Q ss_conf 089997999999876459999 Q gi|254780205|r 275 LDISCSKQCCSFFHSAGVVGI 295 (310) Q Consensus 275 ~~~~~~~~~~k~Fk~n~~~g~ 295 (310) ..++++......+....+.|. T Consensus 322 ~ap~~~~~a~al~~s~~~lG~ 342 (390) T PRK03545 322 LAPDATDVAMALFSGIFNIGI 342 (390) T ss_pred HCCCCHHHHHHHHHHHHHHHH T ss_conf 788967899999999999999 No 66 >PRK12649 putative monovalent cation/H+ antiporter subunit A; Reviewed Probab=37.02 E-value=28 Score=14.79 Aligned_cols=17 Identities=18% Similarity=0.104 Sum_probs=12.8 Q ss_pred HHHHHHHHHCCCCCCCC Q ss_conf 99999964138877843 Q gi|254780205|r 79 GAACTWNDLVDHDIDSQ 95 (310) Q Consensus 79 ~ag~~~Nd~~D~diD~~ 95 (310) ++|.+...-=.||+|+. T Consensus 353 ~aG~i~~~tgtrdi~~l 369 (800) T PRK12649 353 VAGIVAHEAATRDIRKL 369 (800) T ss_pred HHHHHHHHCCCCHHHHH T ss_conf 77599998075118884 No 67 >TIGR01314 gntK_FGGY gluconate kinase; InterPro: IPR006002 Gluconate kinase (2.7.1.12 from EC) is an alpha/beta structure consisting of a twisted parallel beta-sheet surrounded by alpha-helices with overall topology similar to nucleoside monophosphate (NMP) kinases, such as adenylate kinase. Significant conformational changes are induced upon binding of ATP to the enzyme. The largest changes involve a hinge-bending motion of the NMP(bind) part and a motion of the LID with adjacent helices, which opens the cavity to the second substrate, gluconate. The opening of the active site cleft upon ATP binding is the opposite of what has been observed in the NMP kinase family so far, which usually close their active site to prevent fortuitous hydrolysis of ATP. The beta and gamma-phosphate groups of ATP bind in the predicted P-loop. A conserved lysine side-chain interacts with the gamma-phosphate group, and might promote phosphoryl transfer.ATP + D-gluconate = ADP + 6-phospho-D-gluconate. Gluconate-6-phosphate binds with its phosphate group in a similar position as the gamma-phosphate of ATP, consistent with inline phosphoryl transfer. . ; GO: 0019200 carbohydrate kinase activity, 0019521 D-gluconate metabolic process. Probab=36.54 E-value=5 Score=19.35 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=16.9 Q ss_pred HHHHHHHCCCHHHH--------HHHHHHHCCC---CHHHHHHHHHH Q ss_conf 13555410546778--------9999863048---53159989999 Q gi|254780205|r 7 FKWVRDCIMGSAIA--------PYVYLARWHS---STGWHLAVLPC 41 (310) Q Consensus 7 ~~~~~~~~~~~~i~--------~Y~~L~R~~k---p~g~~ll~~p~ 41 (310) +||+||.+..+++. ||=+|+++-+ |-.-.|++-|+ T Consensus 302 lRW~RD~~~~s~i~ta~RLG~DPyD~lT~~A~~v~PGaDGLlFHPY 347 (506) T TIGR01314 302 LRWLRDELLDSEIETAKRLGVDPYDVLTEIAKRVKPGADGLLFHPY 347 (506) T ss_pred HHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 1324556631641112215888157999997107899885420665 No 68 >PRK00625 shikimate kinase; Provisional Probab=36.48 E-value=5.3 Score=19.23 Aligned_cols=21 Identities=29% Similarity=0.370 Sum_probs=15.3 Q ss_pred HCCCCCCCCCCCCCCHHHHCC Q ss_conf 138877843423431010012 Q gi|254780205|r 87 LVDHDIDSQVLRTRSRPLPSG 107 (310) Q Consensus 87 ~~D~diD~~~~RT~~RPl~sG 107 (310) +.|.+.|-..+|.++||++.. T Consensus 101 ~L~~~~e~i~~Rl~~rpl~~~ 121 (173) T PRK00625 101 LLSLPIATIYQRLQKRGLPER 121 (173) T ss_pred EEECCHHHHHHHHHCCCCCCC T ss_conf 983999999999826998777 No 69 >TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter; InterPro: IPR001927 It has been shown that integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. This collection of sequences represents the sodium: galactoside symporter family (SGF). Like sugar transport proteins, these integral membrane proteins are predicted to comprise twelve membrane spanning domains. ; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0016020 membrane. Probab=32.98 E-value=33 Score=14.39 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=15.4 Q ss_pred CCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHHHHC Q ss_conf 10013443100034555444----44321003565444311 Q gi|254780205|r 114 ALVFAVLQFLISFVLLLQFN----PFVICVGFALLFISLLY 150 (310) Q Consensus 114 A~~~~~~l~~l~~~~~~~ln----~~~~~l~~~~~~~~~iY 150 (310) |+.+++++.++....-..-+ -..++....-+.+.+.| T Consensus 87 a~p~~~~~vL~F~~~~~~~~~n~~~~~v~a~~tYi~~g~~Y 127 (470) T TIGR00792 87 AIPFAIVLVLLFTTPDFSATGNPIGKLVYAYITYILLGLFY 127 (470) T ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 78999999999824575543117789999999999984662 No 70 >COG4125 Predicted membrane protein [Function unknown] Probab=32.60 E-value=3.9 Score=20.02 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=28.3 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHC Q ss_conf 998999999641388778434234310100123321011001344310003 Q gi|254780205|r 76 VTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISF 126 (310) Q Consensus 76 ~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~ 126 (310) +..+-+++||-++..-+|+-++|.+.| -+=++-.-+|..|-..+.+++. T Consensus 48 ~~atvAm~WN~vyN~lFd~~~rr~~~~--rT~~vRv~HAv~FE~gliv~lv 96 (149) T COG4125 48 LSATVAMIWNFVYNLLFDRAERRMGTR--RTLAVRVAHAVGFELGLIVILV 96 (149) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999998899999998750--1099999999999750898743 No 71 >COG2119 Predicted membrane protein [Function unknown] Probab=29.97 E-value=37 Score=14.08 Aligned_cols=55 Identities=33% Similarity=0.557 Sum_probs=28.0 Q ss_pred CCCCCCCHHHHHHHH------HHHHHCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 554332001010014------566301114575-4---32024688888742100357998887531000257 Q gi|254780205|r 155 RFILCPQVVLGIGFA------GGVFVGWGALHA-S---FSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIG 217 (310) Q Consensus 155 R~t~~p~~~lG~~~~------~~~l~g~~av~g-~---~~~~~~~L~~~~~~Wt~~~dtiYa~~D~edD~k~G 217 (310) |+.++| ++.|+..+ .++++|..+..- + ..+....+|++.-.|.. ++|+|||++.. T Consensus 30 r~~~~~-v~~g~~~a~~~m~~la~~vG~~~~~~~~~~~~~~~~~~~Flafav~~l-------~edk~~~~e~~ 94 (190) T COG2119 30 RYRRWP-VFAGIAIALFAMHALAVLVGHAAASLLPERPLAWASGVLFLAFAVWML-------IEDKEDDEEAQ 94 (190) T ss_pred HCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-------CCCCCCCCCCC T ss_conf 668800-379999999999999999988875148445799999999999999980-------66221311334 No 72 >pfam04547 Anoctamin Calcium-activated chloride channel. The family carries eight putative transmembrane domains, and, although it has no similarity to other known channel proteins, it is clearly a calcium-activated ionic channel. It is expressed in various secretory epithelia, the retina and sensory neurons, and mediates receptor-activated chloride currents in diverse physiological processes. Probab=28.63 E-value=21 Score=15.54 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=21.5 Q ss_pred CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 0546778999986304853159989999999998521234 Q gi|254780205|r 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLR 53 (310) Q Consensus 14 ~~~~~i~~Y~~L~R~~kp~g~~ll~~p~~~~~~la~~~~~ 53 (310) +-.+++--|..-+... +.-|..|+++|..+-..+.. T Consensus 4 YFGekIa~YFafl~fY----t~~L~~~av~Gi~~~~~~~~ 39 (446) T pfam04547 4 YFGEKIALYFAFLGFY----TKMLLPPAVLGLICFLYGGL 39 (446) T ss_pred HHCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH T ss_conf 6135899999999999----99999999999999999870 No 73 >pfam04923 Ninjurin Ninjurin. Ninjurin (nerve injury-induced protein) is involved in nerve regeneration and in the formation and function in some tissues. Probab=27.88 E-value=40 Score=13.86 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=27.9 Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9980899979999998764599999999999998652 Q gi|254780205|r 272 IIALDISCSKQCCSFFHSAGVVGILILICLIISLFLD 308 (310) Q Consensus 272 i~~~~~~~~~~~~k~Fk~n~~~g~ii~~~iild~lL~ 308 (310) ..+.+.+++++..++.+-|++.-..+++..++..++. T Consensus 69 ~~~~ni~~~~~~~~~~~lNn~~~~~vfiitviNV~Is 105 (116) T pfam04923 69 ISRYNLNNVEEQRRLDRLNNLTTIGVFIITVINVLIS 105 (116) T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9763246578889999998799999999998888887 No 74 >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN; InterPro: IPR011966 This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardised in . This enzyme is related to aldehyde dehydrogenases.. Probab=25.53 E-value=18 Score=16.01 Aligned_cols=14 Identities=43% Similarity=0.456 Sum_probs=9.9 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 00357998887531 Q gi|254780205|r 198 VVYFDTVYAHQDKK 211 (310) Q Consensus 198 t~~~dtiYa~~D~e 211 (310) ...=||+|||.|.+ T Consensus 572 ~~sGD~FYAH~De~ 585 (690) T TIGR02278 572 ELSGDTFYAHMDEI 585 (690) T ss_pred HCCCCCCCCHHHHH T ss_conf 60588420016899 No 75 >pfam06609 TRI12 Fungal trichothecene efflux pump (TRI12). This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes. Probab=25.33 E-value=45 Score=13.58 Aligned_cols=20 Identities=5% Similarity=-0.262 Sum_probs=9.7 Q ss_pred HHHCCCCCHHHHHHHHHCHH Q ss_conf 10002572034665420204 Q gi|254780205|r 211 KDDELIGVNSTARLFSYQTK 230 (310) Q Consensus 211 edD~k~GikSlav~~G~~~~ 230 (310) |..++..-+++|.+.=++.+ T Consensus 291 E~~~~~~~PmiP~rLFk~~r 310 (598) T pfam06609 291 EVFGKPEQPIIPPALFKDTR 310 (598) T ss_pred HHHCCCCCCCCCHHHHCCCH T ss_conf 64402788868889981761 No 76 >TIGR00869 sec62 protein translocation protein, Sec62 family; InterPro: IPR011553 Members of the NSCC2 family have been sequenced from various fungal and animal species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions. This family of Sec62 proteins is restricted to the Ascomycota. ; GO: 0008565 protein transporter activity, 0015031 protein transport, 0030176 integral to endoplasmic reticulum membrane. Probab=23.57 E-value=31 Score=14.59 Aligned_cols=88 Identities=20% Similarity=0.226 Sum_probs=44.6 Q ss_pred HHHHHCCCCCCCCCCCC----CCH---HHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCC-----CCCHHHHHHH-HHH Q ss_conf 99641388778434234----310---1001233210110013443100034555444443-----2100356544-431 Q gi|254780205|r 83 TWNDLVDHDIDSQVLRT----RSR---PLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFV-----ICVGFALLFI-SLL 149 (310) Q Consensus 83 ~~Nd~~D~diD~~~~RT----~~R---Pl~sG~is~~~A~~~~~~l~~l~~~~~~~ln~~~-----~~l~~~~~~~-~~i 149 (310) +.|+.. ..+||...-| +.| -+|.=.|+.++-+ ---..-.+..||.+ ..++.+++++ .++ T Consensus 69 i~nqM~-~rVdKLp~Q~~~~~k~kP~~~~p~L~vn~~~~f-------~dD~yyvW~YnP~p~~~yl~~~l~v~~ilAlVl 140 (259) T TIGR00869 69 IINQMV-IRVDKLPSQEAKEHKQKPEQDLPELQVNRKQEF-------EDDMYYVWLYNPLPLRDYLLVVLVVSVILALVL 140 (259) T ss_pred HHHCCE-ECCCCCCCHHHHHCCCCCCCCCCEEEECCCCCC-------CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 663420-002578865678617888777633651573110-------267346640278338999999999999999874 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCC Q ss_conf 166555543320010100145663011145 Q gi|254780205|r 150 YPFSKRFILCPQVVLGIGFAGGVFVGWGAL 179 (310) Q Consensus 150 Yp~~KR~t~~p~~~lG~~~~~~~l~g~~av 179 (310) ||+.-|+---+..+++ .|++|++.++-++ T Consensus 141 fPLWP~fmR~G~wYlS-~G~lG~ig~FF~~ 169 (259) T TIGR00869 141 FPLWPIFMRRGSWYLS-LGALGIIGVFFAV 169 (259) T ss_pred HCCCHHHHHCCCHHHH-HHHHHHHHHHHHH T ss_conf 0212145635512004-5578899999999 No 77 >TIGR00876 tal_mycobact transaldolase; InterPro: IPR004732 Transaldolase (2.2.1.2 from EC) catalyzes the reversible transfer of a three-carbon ketol unit from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate to form erythrose 4-phosphate and fructose 6-phosphate. This enzyme, together with transketolase, provides a link between the glycolytic and pentose-phosphate pathways. Transaldolase is an enzyme of about 34 Kd whose sequence has been well conserved throughout evolution. A lysine has been implicated in the catalytic mechanism of the enzyme; it acts as a nucleophilic group that attacks the carbonyl group of fructose-6-phosphate. Transaldolase is evolutionary related to a bacterial protein of about 20 Kd (known as talC in Escherichia coli), whose exact function is not yet known.; GO: 0004801 transaldolase activity, 0006098 pentose-phosphate shunt, 0005737 cytoplasm. Probab=23.56 E-value=26 Score=15.01 Aligned_cols=45 Identities=22% Similarity=0.164 Sum_probs=28.4 Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------CCCCCCCCCCCCCCH Q ss_conf 564216999999999999998999999641----------388778434234310 Q gi|254780205|r 58 LGWSTIFWYLFIYIVGAIVTRGAACTWNDL----------VDHDIDSQVLRTRSR 102 (310) Q Consensus 58 ~~~~~~~~~l~l~~~G~~~~r~ag~~~Nd~----------~D~diD~~~~RT~~R 102 (310) +.....-...-+...|+==.|.||-.+..+ +|.|||++++|.-.| T Consensus 157 FS~~~~~E~~~~~~~~~~K~rqaGhslskih~V~S~FVSR~D~EID~~~~~~Gsr 211 (350) T TIGR00876 157 FSVKIAREVADILLKEAEKARQAGHSLSKIHAVISVFVSRVDKEIDKLLDKIGSR 211 (350) T ss_pred ECHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEEECCCCHHHHHCCCCCCH T ss_conf 1326789999999876677664043043210244776530231232212433430 No 78 >TIGR01388 rnd ribonuclease D; InterPro: IPR006292 These proteins represent ribonuclease D, a 3-exonuclease shown to act on tRNA both in vitro and when overexpressed in vivo. Members of this family are restricted to the Proteobacteria; Aquifex, Mycobacteria and eukaryotes. Ribonuclease D is not essential in Escherichia coli but is deleterious when overexpressed. The precise biological role of ribonuclease D is still unknown. ; GO: 0004540 ribonuclease activity, 0008033 tRNA processing, 0005737 cytoplasm. Probab=22.13 E-value=44 Score=13.60 Aligned_cols=95 Identities=14% Similarity=0.100 Sum_probs=55.0 Q ss_pred HHHHHCCC-HHHHHHHHHHHCCCCHHHHHHHHHHHH---HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 55541054-677899998630485315998999999---99985212343344564216999999999999998999999 Q gi|254780205|r 9 WVRDCIMG-SAIAPYVYLARWHSSTGWHLAVLPCLW---STVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTW 84 (310) Q Consensus 9 ~~~~~~~~-~~i~~Y~~L~R~~kp~g~~ll~~p~~~---~~~la~~~~~~~~~~~~~~~~~~l~l~~~G~~~~r~ag~~~ 84 (310) +++|...+ ..+.|+.+++| .|..+=+++ +.- =+|....+..+...++-+ +.. .+.|--..-|-.--+ T Consensus 49 ~LIDPL~~~~~~~Pl~~lL~--d~~v~KvlH--AaseDlEvF~~l~g~lP~PLfDTQ----i~A-a~~G~g~s~gY~~LV 119 (374) T TIGR01388 49 ALIDPLVIDIDLSPLLELLA--DESVVKVLH--AASEDLEVFLNLFGVLPKPLFDTQ----IAA-AFLGFGESMGYDKLV 119 (374) T ss_pred EEECCCCCCCCHHHHHHHHH--CCCCEEEEC--CCCHHHHHHHHHHCCCCCCCHHHH----HHH-HHHCCCCCHHHHHHH T ss_conf 87658887523479999973--898158530--450479999987057988830588----999-983678521089999 Q ss_pred HHHCCCCCCCCCCCCC--CHHHHCCCCCHH Q ss_conf 6413887784342343--101001233210 Q gi|254780205|r 85 NDLVDHDIDSQVLRTR--SRPLPSGQCTRF 112 (310) Q Consensus 85 Nd~~D~diD~~~~RT~--~RPl~sG~is~~ 112 (310) .++-+.++||--.||- .|||--.+++-. T Consensus 120 ~~~~~v~LdKse~rtDW~~RPLtd~Ql~YA 149 (374) T TIGR01388 120 QEVLGVELDKSETRTDWLARPLTDKQLEYA 149 (374) T ss_pred HHHHCEECCCCCCCCHHHCCCCCHHHHHHH T ss_conf 997370317888722210478987789999 No 79 >pfam00474 SSF Sodium:solute symporter family. Probab=21.46 E-value=53 Score=13.11 Aligned_cols=21 Identities=14% Similarity=0.104 Sum_probs=12.2 Q ss_pred HHHHHHHHHHHHHHCCCCCCC Q ss_conf 999989999996413887784 Q gi|254780205|r 74 AIVTRGAACTWNDLVDHDIDS 94 (310) Q Consensus 74 ~~~~r~ag~~~Nd~~D~diD~ 94 (310) ...-|....+.-|++++.+|+ T Consensus 61 ~~~r~~~~~T~~d~l~~Rygs 81 (406) T pfam00474 61 PRLRNLGAYTMPDYLRKRFGG 81 (406) T ss_pred HHHHHCCCCCHHHHHHHHHCC T ss_conf 999996993679999988289 No 80 >PRK01253 preprotein translocase subunit SecG; Reviewed Probab=21.45 E-value=18 Score=15.91 Aligned_cols=40 Identities=5% Similarity=-0.022 Sum_probs=23.5 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHCCCC Q ss_conf 998999999641388778434234310100123321011001344310003455 Q gi|254780205|r 76 VTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLL 129 (310) Q Consensus 76 ~~r~ag~~~Nd~~D~diD~~~~RT~~RPl~sG~is~~~A~~~~~~l~~l~~~~~ 129 (310) +|++|| +=.|+|-|..+ =++||+.++.+++++.++-..+- T Consensus 9 ~~ssAG--LiRYfdee~~~------------iki~Pk~vi~~~i~~~~~v~~l~ 48 (54) T PRK01253 9 PMSSAG--LIRYFEEETEA------------IKLDPKTVIAIGIALGAAVLALN 48 (54) T ss_pred CCCCCC--HHHHHHHHCCC------------CCCCCCEEEHHHHHHHHHHHHHH T ss_conf 756550--13421413335------------44386243034999999999998 No 81 >pfam05858 BIV_Env Bovine immunodeficiency virus surface protein (SU). The bovine lentivirus also known as the bovine immunodeficiency-like virus (BIV) has conserved and hypervariable regions in the surface envelope gene. This family corresponds to the SU surface protein. Probab=20.75 E-value=55 Score=13.02 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=9.9 Q ss_pred HHHHHHHHHHHHHHHHHHH Q ss_conf 6999999999999998999 Q gi|254780205|r 63 IFWYLFIYIVGAIVTRGAA 81 (310) Q Consensus 63 ~~~~l~l~~~G~~~~r~ag 81 (310) +-...++..+|+..|.|.+ T Consensus 104 VR~VfIi~ilgtltmagta 122 (548) T pfam05858 104 VRGVFIIGILGTLTMAGTA 122 (548) T ss_pred HHHHHEEEEECCHHCCCCC T ss_conf 6550102331200014410 No 82 >KOG4202 consensus Probab=20.10 E-value=57 Score=12.94 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=19.5 Q ss_pred HHHHHHHCCCCCC-------CCCCCCCCHHHHCC Q ss_conf 9999641388778-------43423431010012 Q gi|254780205|r 81 ACTWNDLVDHDID-------SQVLRTRSRPLPSG 107 (310) Q Consensus 81 g~~~Nd~~D~diD-------~~~~RT~~RPl~sG 107 (310) +.+-|...|-+.| +.-||+++||++.. T Consensus 22 ~~Aa~~~l~s~~dl~g~i~v~~~kR~~D~~~ak~ 55 (227) T KOG4202 22 GYAANRKLSSSVDLTGNIAVKDDKRGKDRPLAKM 55 (227) T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH T ss_conf 6665441146765202230365334456568878 Done!