RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780205|ref|YP_003064618.1| prenyltransferase [Candidatus Liberibacter asiaticus str. psy62] (310 letters) >gnl|CDD|36595 KOG1381, KOG1381, KOG1381, Para-hydroxybenzoate-polyprenyl transferase [Coenzyme transport and metabolism]. Length = 353 Score = 174 bits (442), Expect = 3e-44 Identities = 104/294 (35%), Positives = 144/294 (48%), Gaps = 14/294 (4%) Query: 21 PYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGA 80 PY L R G L PC WS +AA G L ++ VGA++ RGA Sbjct: 66 PYAQLMRLDKPIGTWLLYWPCTWSIAMAADA-------GLLPSIKMLALFGVGALLMRGA 118 Query: 81 ACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVG 140 CT NDL D D+D++V RT+ RPL SG + QA+ F Q + +LLQ N + I +G Sbjct: 119 GCTINDLWDKDLDAKVERTKLRPLASGSLSPRQAIGFLGAQLSLGLGILLQLNWYSIALG 178 Query: 141 FALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWGALHASFSWPA--FFLCIGTIFWV 198 + L + + YP KRF PQ+VLG+ F G +GW AL S P+ L + + W Sbjct: 179 ASSLALVITYPLMKRFTYWPQLVLGLTFNWGALLGWCALKGS-LSPSAVLPLYLSGVCWT 237 Query: 199 VYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWL--FILYGIFVLCFMVAFCLLTVNFF 256 + +DT+YAHQDK+DD IGV STA F TK WL F I L T ++ Sbjct: 238 LIYDTIYAHQDKRDDVKIGVKSTALRFGDNTKPWLSGFGAAQIASLAAAGIASDQTWPYY 297 Query: 257 AWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLFLDQF 310 A +G + A +I +DI C F S G+++ +++ L F Sbjct: 298 AALGAVAARL--GSQIYKVDIDNPSDCWKKFKSNSNTGLILFSGIVLDTLLKSF 349 >gnl|CDD|30731 COG0382, UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism]. Length = 289 Score = 145 bits (367), Expect = 2e-35 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 10/294 (3%) Query: 14 IMGSAIAPYVYLARWHSSTGWHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVG 73 + + + + L R L +LP L +LAA L + + Sbjct: 5 SLPNKLKALLKLLRLDRPIFNLLLLLPALLGLLLAAS---------GLPSLKLLLLAFLA 55 Query: 74 AIVTRGAACTWNDLVDHDIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFN 133 + R A NDL D +ID RT++RPLPSG+ + +AL+ A+L L+ L L N Sbjct: 56 FFLARSAGYVINDLADREIDRINPRTKNRPLPSGRVSVKEALLLAILLLLLGLALALLLN 115 Query: 134 PFVICVGFALLFISLLYPFSKRFILCPQVVLGIGFAGGVFVGWGALHASFSWPAFFLCIG 193 P + A L ++L YPF KRF PQ+VLG+ F G G A+ S A+ L + Sbjct: 116 PLAFLLSLAALVLALAYPFLKRFTFLPQLVLGLAFGLGALAGAAAVGGSLPLLAWLLLLA 175 Query: 194 TIFWVVYFDTVYAHQDKKDDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTV 253 I W + +D +YA QD + D G+ S LF + L L +L + ++ L + Sbjct: 176 AILWTLGYDIIYAIQDIEGDRKAGLKSLPVLFGIKKALALALLLLLASALLVLLGLLAGL 235 Query: 254 N-FFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICLIISLF 306 +GLL+A L + +I+ +D+ C + F ++G+L+ I LI+++ Sbjct: 236 LGLIYLLGLLVAALLLLYQILIVDVRDPPACFALFDVNLLLGLLLFIGLILAVL 289 >gnl|CDD|144580 pfam01040, UbiA, UbiA prenyltransferase family. Length = 258 Score = 84.5 bits (209), Expect = 4e-17 Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 11/235 (4%) Query: 34 WHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDID 93 LA+LP L LAA G + L + ++ ++ + A ND D +ID Sbjct: 1 LPLALLPVLAGLALAA---------GGALDLLLLLLLLLALLLLQAAGNVLNDYFDREID 51 Query: 94 SQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLY--P 151 + SRPLPSG+ + +AL+ A+ L+ +L L P ++ +G L + LLY P Sbjct: 52 ADNPNKPSRPLPSGRISPREALLLALALLLLGLLLALLLGPLLLLLGLLGLLLGLLYSLP 111 Query: 152 FSKRFILCPQVVLGIGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKK 211 KR L ++V+G+ F + +G A+ P L + + +D + Sbjct: 112 RLKRRPLLGELVVGLAFGLLILLGAYAVGGDIPSPLLLLALPLFLLGLAILLANDIRDVE 171 Query: 212 DDELIGVNSTARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALF 266 D G + + L L L L + LL + +L+A Sbjct: 172 GDRKAGRRTLPVRLGEKRALALLALLLAAALLLLALLLLLLAPLLLLLAVLLAAL 226 >gnl|CDD|30458 COG0109, CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones]. Length = 304 Score = 65.6 bits (160), Expect = 2e-11 Identities = 60/270 (22%), Positives = 102/270 (37%), Gaps = 13/270 (4%) Query: 45 TVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLRTRSRPL 104 T A L G + + L +G + G A +N +D DID+ + RTR RPL Sbjct: 36 TAFAGMLLAPRGSINPLLLLLTL----LGGALGAGGAGAFNMYIDRDIDALMERTRKRPL 91 Query: 105 PSGQCTRFQALVFAVLQFLISFVLLLQF-NPFVICVG-FALLFISLLY-PFSKRFILCPQ 161 +G + +AL F ++ + F LL N +G F + F ++Y + KR PQ Sbjct: 92 VTGLISPREALAFGLVLGVAGFSLLWFLVNLLAAVLGLFGIFFYVVVYTLWLKRR--TPQ 149 Query: 162 VVLGIGFAGGV--FVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVN 219 ++ GFAG + +GW A+ S S A L W A + K D + G+ Sbjct: 150 NIVIGGFAGAMPPLIGWAAVTGSISLGAILLFAIIFLWTPPHFWALALKYKDDYKAAGIP 209 Query: 220 --STARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDI 277 + + L + + ++A + + L+ + Sbjct: 210 MLPVVKGERRTKRQILLYTLALAPVSLLLALLGYVGYLYLVVATLLGAWFLALAWKLYRK 269 Query: 278 SCSKQCCSFFHSAGVVGILILICLIISLFL 307 K F + + L+ + L+I L Sbjct: 270 DDRKWARKLFKYSIIYLALLFVALLIDSLL 299 >gnl|CDD|36594 KOG1380, KOG1380, KOG1380, Heme A farnesyltransferase [Coenzyme transport and metabolism]. Length = 409 Score = 43.9 bits (103), Expect = 5e-05 Identities = 52/239 (21%), Positives = 82/239 (34%), Gaps = 19/239 (7%) Query: 36 LAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQ 95 L VL + LA P + T+ + VG + +A N + + DSQ Sbjct: 108 LVVLTTMTGYALAPGPF------SFPTLLYT----TVGTGLCSASANAINQIFEPPFDSQ 157 Query: 96 VLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLL-LQFNPFVICVGFALLFI--SLLYPF 152 + RT++RPL G+ + A+ FA L LL NP +G +F+ + P Sbjct: 158 MKRTQNRPLVRGRISPLHAVTFATLTGTAGVSLLAFGVNPLAAALGAGNIFLYAGVYTPL 217 Query: 153 SKRFILCPQVVLGIGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKD 212 + I+ V +G A +GW A A L W + + D Sbjct: 218 KRIHIINTWVGAVVG-AIPPLMGWAAASGLLDPGAMILAGILYAWQFPHFNALSWNLRND 276 Query: 213 DELIGVNSTA---RLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFLT 268 G A + L + L + LT +FA L + +L Sbjct: 277 YSKAGYRMMAVTNPGLCRRVALRYSLA--FLPLSYAAPSTDLTTWWFAIESLPLNAYLA 333 >gnl|CDD|35262 KOG0039, KOG0039, KOG0039, Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]. Length = 646 Score = 33.4 bits (76), Expect = 0.079 Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 15/237 (6%) Query: 42 LWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHDIDSQVLRTRS 101 L LR + W + LF + V G + S + Sbjct: 126 RMGAFLPNLWLRVWVLFLWLGLNVGLFTWRFLQYVYLGTRHILGLCLALARGSAETLNFN 185 Query: 102 RPLPSGQCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQ 161 L R + FL S++ + F V + LL+ + P Sbjct: 186 MALILLPVCRNRLTFLRCSTFLFSYLPFDRNLNFHKLVALTIAVFILLHIWLHLVNFFPF 245 Query: 162 VVLGIGFAGGVFVGWGALHASFSWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNST 221 +V G+ + + L ++ W L + + V+ + ++ V S Sbjct: 246 LVHGLEYTISLASELFFLPKTYKW--LLLGVVGLTGVILLILML---------IMFVLSL 294 Query: 222 A--RLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALFL-TIKRIIAL 275 R Y+ + LY +F + ++ + W+ + + + L + RI+ Sbjct: 295 PFFRRRFYEAFWYTHHLYIVFYILLIIHGGFRLLGTT-WMYIAVPVLLYILDRILRF 350 >gnl|CDD|147463 pfam05279, Asp-B-Hydro_N, Aspartyl beta-hydroxylase N-terminal region. This family includes the N-terminal regions of the junctin, junctate and aspartyl beta-hydroxylase proteins. Junctate is an integral ER/SR membrane calcium binding protein, which comes from an alternatively spliced form of the same gene that generates aspartyl beta-hydroxylase and junctin. Aspartyl beta-hydroxylase catalyses the post-translational hydroxylation of aspartic acid or asparagine residues contained within epidermal growth factor (EGF) domains of proteins. Length = 232 Score = 32.9 bits (75), Expect = 0.13 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 53 RRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDHD 91 R+ G+ G S W++ I ++G V A W DLVD++ Sbjct: 3 RKGGLSGGSFFTWFMVIALLG--VWTSVAVVWFDLVDYE 39 >gnl|CDD|31763 COG1575, MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]. Length = 303 Score = 31.3 bits (71), Expect = 0.30 Identities = 45/251 (17%), Positives = 78/251 (31%), Gaps = 31/251 (12%) Query: 34 WHLAVLPCLWSTVLAAYPLRRAGVLGWSTIFWYLFIYIVGAIVTRGAACTWNDLVDH--- 90 A+ P + T LA + G S + ++ AI+ + ND D+ Sbjct: 20 LPAAIAPVIVGTALAFW-------YGKSFNLLVALLALIAAILLQILVNLANDYFDYKKG 72 Query: 91 -DIDSQVLRTRSRPLPSGQCTRFQALVFAVLQFLISFVLLL----QFNPFVICVGFALLF 145 D +S + L A+ +L + + V+ +G + Sbjct: 73 TDTHGPDRLKQSGLIVRQSMKPALILSLALFLLAGLALLGVILAALSDWLVLLLGLLCIA 132 Query: 146 ISLLYPFSKRFILCPQVVLGIG-FAGGVFVGWGALHAS-------FSWPAFFLCIGTIFW 197 +LY P +G+G GVF G + + SW + Sbjct: 133 AGILYTGGPF----PLGYMGLGEIFVGVFFGPLIVLGAYYIQTGRLSWAILLPSLPVGIL 188 Query: 198 VVYFDTVYAHQDKKDDELIGVNSTA-RLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFF 256 + +D ++D G + A RL + L + L ++ L F Sbjct: 189 IANILLANNLRDIEEDIRNGKYTLAVRLGRKNARKLYAALLVVAYLAIVIFVILG---LF 245 Query: 257 AWIGLLIALFL 267 GLL L L Sbjct: 246 PVWGLLFLLAL 256 >gnl|CDD|34938 COG5374, COG5374, Uncharacterized conserved protein [Function unknown]. Length = 192 Score = 29.5 bits (66), Expect = 1.1 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 242 LCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSKQCCSFFHSAGVVGILILICL 301 + + + F LL V + L++ L ++R + S SK F H + I Sbjct: 3 IYYTLVFSLLVVEMVMFFILVLPLPKRLRRSLMKLYSTSKVYRGFKHI-----LKITFIF 57 Query: 302 IISLFLD 308 I+ LF+D Sbjct: 58 ILLLFID 64 >gnl|CDD|37782 KOG2571, KOG2571, KOG2571, Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]. Length = 862 Score = 28.8 bits (64), Expect = 1.8 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 6/92 (6%) Query: 220 STARLFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIG--LLIALFLTIKRIIALDI 277 + L S++ + W ++ +F + + CL F +G +++ + ++ I Sbjct: 644 NFVLLLSFRGRSWNSTVHNLFPILLFILLCLTFSLFMQLLGARPRGNVYMLAMSLYSVLI 703 Query: 278 SCSKQCCSFFHSA----GVVGILILICLIISL 305 S C A G++G I +IIS Sbjct: 704 IYSLLCAGVLAPASLFEGLLGTSGFIAIIISP 735 >gnl|CDD|34325 COG4709, COG4709, Predicted membrane protein [Function unknown]. Length = 195 Score = 28.3 bits (63), Expect = 3.0 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 20/89 (22%) Query: 224 LFSYQTKLWLFILYGIFVLCFMVAFCLLTVNFFA---------WIGLLIALFLTIKRIIA 274 L + L L I +FV+ +VA L + +A I + +LFL I A Sbjct: 90 LLAVIIGLPLLIGVILFVIAILVAALTLIFSGWALVAAGILGGVILGVESLFLIGSSISA 149 Query: 275 LDISCSKQCCSFFHSAGVVGILILICLII 303 FF G + + + + ++I Sbjct: 150 -----------FFIGIGSLLLGLGLGIVI 167 >gnl|CDD|99802 cd06206, bifunctional_CYPOR, These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR). NADPH cytochrome p450 reductase serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.. Length = 384 Score = 28.0 bits (63), Expect = 3.4 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Query: 31 STGWHLAVLPCLWSTVLAAYPLRRAGVLGWST 62 G +LAVLP L LRR G L W T Sbjct: 31 RAGDYLAVLP-RNPPELVRRALRRFG-LAWDT 60 >gnl|CDD|38825 KOG3619, KOG3619, KOG3619, Adenylate/guanylate cyclase [Energy production and conversion]. Length = 867 Score = 27.2 bits (60), Expect = 6.5 Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 3/161 (1%) Query: 108 QCTRFQALVFAVLQFLISFVLLLQFNPFVICVGFALLFISLLYPFSKRFILCPQVVLGIG 167 + F + + L L L Q + L S +L L Sbjct: 393 RDEYFTSPLGCALLVLCFDGLY-QLLIIPRSLLLLLCLSSAFVCLLLCVVLLMPDSLQWL 451 Query: 168 FAGGVFVGWGALHASF--SWPAFFLCIGTIFWVVYFDTVYAHQDKKDDELIGVNSTARLF 225 S + + + +F ++ + H + +L+ Sbjct: 452 SPKIFRTRIARTALSIFTVLIIYMVALINMFACLFSSCIPNHTITFSSISERCEAVPQLY 511 Query: 226 SYQTKLWLFILYGIFVLCFMVAFCLLTVNFFAWIGLLIALF 266 + + + +F+ + LL + FA GLLI L Sbjct: 512 FLLSCVLGLLSTAVFLRLPFMLKLLLLLIVFAAYGLLIELS 552 >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 Score = 26.8 bits (60), Expect = 8.1 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 259 IGLLIALFLTI---KRIIALDISCSKQ 282 IGLL +L I KR+IA+DI K Sbjct: 171 IGLLAIQWLKILGAKRVIAVDIDDEKL 197 >gnl|CDD|145408 pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyses the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli. Length = 464 Score = 26.6 bits (59), Expect = 8.4 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 7/71 (9%) Query: 236 LYGI--FVLCFMVAFCLLTVNFFAWIGLLIALFLTIKRIIALDISCSK--QCCSFFHSAG 291 + GI + + FA I IA I IA + + Q + FHS Sbjct: 32 ILGIIGMTIALIATLLGPDFTGFAQIIGAIAPGGAIGLPIAKRVEMTAMPQLVAAFHS-- 89 Query: 292 VVGI-LILICL 301 VG+ +L+ + Sbjct: 90 FVGLAAVLVGI 100 >gnl|CDD|147584 pfam05478, Prominin, Prominin. The prominins are an emerging family of proteins that among the multispan membrane proteins display a novel topology. Mouse prominin and human prominin (mouse)-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration. Length = 809 Score = 26.5 bits (59), Expect = 9.3 Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%) Query: 128 LLLQFNPFVICVGFALLFISLLYPFSKRFILC 159 LL ++C +LFI LL P C Sbjct: 87 LLRYEWGVLVCAVIGVLFI-LLMPIVGLCFCC 117 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.337 0.147 0.510 Gapped Lambda K H 0.267 0.0744 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 4,211,556 Number of extensions: 243717 Number of successful extensions: 1819 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1753 Number of HSP's successfully gapped: 258 Length of query: 310 Length of database: 6,263,737 Length adjustment: 94 Effective length of query: 216 Effective length of database: 4,232,491 Effective search space: 914218056 Effective search space used: 914218056 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.7 bits) S2: 57 (25.7 bits)