HHsearch alignment for GI: 254780206 and conserved domain: COG1181
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane].
Probab=94.17 E-value=0.054 Score=34.38 Aligned_cols=97 Identities=18% Similarity=0.113 Sum_probs=66.5
Q ss_pred HHHCCHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHCCCCEEEEEECCCCCCCCCCCHHH----HHHHHHHHHHHHCCC
Q ss_conf 52010235788876531011112234401-1111210124202563046534300023235----677888788751445
Q gi|254780206|r 99 LESSKSFAKKFCTKYGIPTATYQHFSDPM-KAKQYVQNKSMPIVVKADGLCAGKGVVVAAT----VDEATSAIDRCFQQI 173 (424)
Q Consensus 99 le~sK~~~K~~l~~~gIPt~~~~~~~~~~-ea~~~~~~~g~PvVVKp~~~agGkGV~i~~~----~~e~~~~~~~~~~~~ 173 (424)
T Consensus 48 ~~~~~~~~~~~~~~~~vvfp~lhG~~gEDg~iqg~le~~giPyvg~gv~~Sa~~mdk~~~K~~~~~~g~~~a~~~~~~~~ 127 (317)
T COG1181 48 WMLDKEVTKRVLQKADVVFPVLHGPYGEDGTIQGLLELLGIPYVGKGVLASAGAMDKIVTKRLFKAEGLPVAPYVALTRD 127 (317)
T ss_pred EEECCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCC
T ss_conf 78503101222026987787155888887069999997099876076445332350999988998678651235675334
Q ss_pred C-HHHHHHHHHHCCCCCEEEECC
Q ss_conf 3-177788775205752344215
Q gi|254780206|r 174 N-STVIIEEYLEGFEVSFFALCD 195 (424)
Q Consensus 174 ~-~~VliEefl~G~E~Sv~~i~d 195 (424)
T Consensus 128 ~~~~~~~e~~~~~l~~p~~Vkp~ 150 (317)
T COG1181 128 EYSSVIVEEVEEGLGFPLFVKPA 150 (317)
T ss_pred CCHHHHHHHHHCCCCCCEEEECC
T ss_conf 52047888774146887899858