HHsearch alignment for GI: 254780206 and conserved domain: PRK00683
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.95 E-value=0.49 Score=27.49 Aligned_cols=86 Identities=20% Similarity=0.204 Sum_probs=49.2
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
Q ss_conf 58998865889999999985899678999549835751170551287898999999987189799997955787489989
Q gi|254780206|r 2 RVLLIGSGGREHALAWKIAQSPLLSELWSIPGNPGIAQHAQCVAIDIQNHSAIIHFCQEKHIDLVVVGPELPLVNGISDA 81 (424)
Q Consensus 2 kILviGsGgrEhAl~~~l~~s~~~~~v~~~pgN~g~~~~~~~~~i~~~d~~~i~~~a~~~~iDlvivgpE~pL~~gi~d~ 81 (424)
T Consensus 5 kvlV~GlG~SG~s~a~~L~~~g~--~v~~~D~~~~~~~~~~~~~~~~~~--~~~~~~--~~~d~vv~SPGi~~~~p~~~~ 78 (418)
T PRK00683 5 RVVVLGLGVTGKSVARFLAQKGV--YVIGVDNSLEALQSCPYIHERYLE--GAEEFP--EQVDLVVRSPGIKPYHPWVEA 78 (418)
T ss_pred EEEEEEECHHHHHHHHHHHHCCC--EEEEECCCHHHHHHCCHHHHHCCC--CHHHCC--CCCCEEEECCCCCCCCHHHHH
T ss_conf 69998088879999999997829--899982981454546145554056--233242--349899989985998899999
Q ss_pred HHHCCCCEEECC
Q ss_conf 860588067010
Q gi|254780206|r 82 LNAAGFKVFGPS 93 (424)
Q Consensus 82 l~~~gi~v~Gp~ 93 (424)
T Consensus 79 a~~~~i~i~sei 90 (418)
T PRK00683 79 AVALKIPVVTDI 90 (418)
T ss_pred HHHCCCCCCCHH
T ss_conf 998699754079