HHsearch alignment for GI: 254780206 and conserved domain: PRK04308

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.24  E-value=0.74  Score=26.17  Aligned_cols=91  Identities=14%  Similarity=0.211  Sum_probs=51.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHH---HCCE---EEECCCCCHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf             5899886588999999998589967899954983575---1170---551287898999999987189799997955787
Q gi|254780206|r    2 RVLLIGSGGREHALAWKIAQSPLLSELWSIPGNPGIA---QHAQ---CVAIDIQNHSAIIHFCQEKHIDLVVVGPELPLV   75 (424)
Q Consensus         2 kILviGsGgrEhAl~~~l~~s~~~~~v~~~pgN~g~~---~~~~---~~~i~~~d~~~i~~~a~~~~iDlvivgpE~pL~   75 (424)
T Consensus         7 ~v~viGlG~sG~s~a~~L~~~G--~~v~~~D~~~~~~~~~~~~~~~~~i~~~~g~~~~----~~~~~~d~vV~SPgI~~~   80 (445)
T PRK04308          7 KILVAGLGGTGISMIAYLRKNG--AEVAAYDAELKAERVAQIGKMFDGLVFYTGRLKD----ALDNGFDILALSPGISER   80 (445)
T ss_pred             EEEEEEECHHHHHHHHHHHHCC--CEEEEEECCCCCCHHHHHHHCCCCCEEEECCCHH----HHCCCCCEEEECCCCCCC
T ss_conf             8999998999999999999789--9199997999953189997436996899378636----501599999989953899


Q ss_pred             HHHHHHHHHCCCCEEECCHHHHH
Q ss_conf             48998986058806701066655
Q gi|254780206|r   76 NGISDALNAAGFKVFGPSQRAAK   98 (424)
Q Consensus        76 ~gi~d~l~~~gi~v~Gp~~~aa~   98 (424)
T Consensus        81 ~p~l~~a~~~gi~i~~~~el~~~  103 (445)
T PRK04308         81 QPDIEAFKQNGGRVLGDIELLAD  103 (445)
T ss_pred             CHHHHHHHHCCCCEECHHHHHHH
T ss_conf             99999999759957159999999