HHsearch alignment for GI: 254780206 and conserved domain: PRK04308
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.24 E-value=0.74 Score=26.17 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=51.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHH---HCCE---EEECCCCCHHHHHHHHHHHCCCEEEECCCHHHH
Q ss_conf 5899886588999999998589967899954983575---1170---551287898999999987189799997955787
Q gi|254780206|r 2 RVLLIGSGGREHALAWKIAQSPLLSELWSIPGNPGIA---QHAQ---CVAIDIQNHSAIIHFCQEKHIDLVVVGPELPLV 75 (424)
Q Consensus 2 kILviGsGgrEhAl~~~l~~s~~~~~v~~~pgN~g~~---~~~~---~~~i~~~d~~~i~~~a~~~~iDlvivgpE~pL~ 75 (424)
T Consensus 7 ~v~viGlG~sG~s~a~~L~~~G--~~v~~~D~~~~~~~~~~~~~~~~~i~~~~g~~~~----~~~~~~d~vV~SPgI~~~ 80 (445)
T PRK04308 7 KILVAGLGGTGISMIAYLRKNG--AEVAAYDAELKAERVAQIGKMFDGLVFYTGRLKD----ALDNGFDILALSPGISER 80 (445)
T ss_pred EEEEEEECHHHHHHHHHHHHCC--CEEEEEECCCCCCHHHHHHHCCCCCEEEECCCHH----HHCCCCCEEEECCCCCCC
T ss_conf 8999998999999999999789--9199997999953189997436996899378636----501599999989953899
Q ss_pred HHHHHHHHHCCCCEEECCHHHHH
Q ss_conf 48998986058806701066655
Q gi|254780206|r 76 NGISDALNAAGFKVFGPSQRAAK 98 (424)
Q Consensus 76 ~gi~d~l~~~gi~v~Gp~~~aa~ 98 (424)
T Consensus 81 ~p~l~~a~~~gi~i~~~~el~~~ 103 (445)
T PRK04308 81 QPDIEAFKQNGGRVLGDIELLAD 103 (445)
T ss_pred CHHHHHHHHCCCCEECHHHHHHH
T ss_conf 99999999759957159999999