HHsearch alignment for GI: 254780206 and conserved domain: TIGR01361
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase; InterPro: IPR006268 These sequences are one of at least three types of phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthase). This enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids and of PABA, ubiquinone and menaquinone. Some members of this family, including an experimentally characterised member from Bacillus subtilis, are bifunctional, with a chorismate mutase domain N-terminal to this region. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.; GO: 0016832 aldehyde-lyase activity, 0009073 aromatic amino acid family biosynthetic process.
Probab=90.53 E-value=0.74 Score=26.17 Aligned_cols=78 Identities=21% Similarity=0.227 Sum_probs=49.8
Q ss_pred CCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CHH-HHHHHHHHCCCCCE-EEE---
Q ss_conf 122344011111210124202563046534300023235677888788751445-317-77887752057523-442---
Q gi|254780206|r 120 YQHFSDPMKAKQYVQNKSMPIVVKADGLCAGKGVVVAATVDEATSAIDRCFQQI-NST-VIIEEYLEGFEVSF-FAL--- 193 (424)
Q Consensus 120 ~~~~~~~~ea~~~~~~~g~PvVVKp~~~agGkGV~i~~~~~e~~~~~~~~~~~~-~~~-VliEefl~G~E~Sv-~~i--- 193 (424)
T Consensus 116 ARNmQNF-~LL~~vG~~~KPVLLKR-------G~--~aTi~EwL~AAEYIl~~GsN~~ViLCERGIRTfE~~TR~TLD~s 185 (262)
T TIGR01361 116 ARNMQNF-ELLKEVGKQGKPVLLKR-------GM--GATIEEWLEAAEYILSEGSNGNVILCERGIRTFEKSTRNTLDLS 185 (262)
T ss_pred CCCCCCH-HHHHHHHHCCCCEEEEC-------CC--CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 5412256-99999722379755307-------72--15899999999999846889954899758567630024533378
Q ss_pred --CCCCCCCCCCCCCC
Q ss_conf --15776310352000
Q gi|254780206|r 194 --CDGKTAIPFTTARD 207 (424)
Q Consensus 194 --~dG~~~~~l~~~~d 207 (424)
T Consensus 186 aV~~~K~~tHLPi~VD 201 (262)
T TIGR01361 186 AVPLLKKETHLPIIVD 201 (262)
T ss_pred HHHHHHHCCCCCEEEC
T ss_conf 9999986058987871