HHsearch alignment for GI: 254780206 and conserved domain: TIGR02144
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX; InterPro: IPR011870 The family of proteins found in this family include the characterised LysX from Thermus thermophilus which is part of a well-organised lysine biosynthesis gene cluster . LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this family contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterised in Escherichia coli, and acts by ATP-dependent condensation of S6 with glutamate residues .; GO: 0003824 catalytic activity, 0005524 ATP binding, 0009085 lysine biosynthetic process.
Probab=99.51 E-value=9.6e-14 Score=119.31 Aligned_cols=201 Identities=18% Similarity=0.191 Sum_probs=136.9
Q ss_pred HCCCEEEECCCH-HHHHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 189799997955-7874899898605880670106665552010235788876531011112234401111121012420
Q gi|254780206|r 61 KHIDLVVVGPEL-PLVNGISDALNAAGFKVFGPSQRAAKLESSKSFAKKFCTKYGIPTATYQHFSDPMKAKQYVQNKSMP 139 (424)
Q Consensus 61 ~~iDlvivgpE~-pL~~gi~d~l~~~gi~v~Gp~~~aa~le~sK~~~K~~l~~~gIPt~~~~~~~~~~ea~~~~~~~g~P 139 (424)
T Consensus 47 ~~~dv~i~R~VS~~R~L~~a~~~E~~G~~~i-N~~~~i~~cgDK~~T~~~L~~~gvP~P~t~~a~d~~~A~~~~e~lGYP 125 (289)
T TIGR02144 47 EDLDVAIIRNVSQSRALYSAFLLEAVGVPTI-NSSHAIIACGDKIFTTLKLAKAGVPTPRTYIAFDREAALKAAEELGYP 125 (289)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHCCCEEE-CCHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCC
T ss_conf 3755689830345679999999984897152-775898750461889999996678898358982868999999970898
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHH--HHHCCCCHH-HHHHHHHH--CCCCCEEEECCCCCCCCCCCCCCCCCCCC-
Q ss_conf 2563046534300023235677888788--751445317-77887752--05752344215776310352000111356-
Q gi|254780206|r 140 IVVKADGLCAGKGVVVAATVDEATSAID--RCFQQINST-VIIEEYLE--GFEVSFFALCDGKTAIPFTTARDHKRIHD- 213 (424)
Q Consensus 140 vVVKp~~~agGkGV~i~~~~~e~~~~~~--~~~~~~~~~-VliEefl~--G~E~Sv~~i~dG~~~~~l~~~~dyKr~~~- 213 (424)
T Consensus 126 vV~KP~~GSWGRlV~~~~d~~~~~~llEh~e~~~~~~~~~~y~QEfi~KPgRDIR~fVi--Gd~~~~-AI---Y-R~~~P 198 (289)
T TIGR02144 126 VVLKPVIGSWGRLVSKIRDKDELESLLEHKEVLGGSQLKLYYVQEFINKPGRDIRVFVI--GDEAIA-AI---Y-RYSEP 198 (289)
T ss_pred EEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEE--CCCCEE-EE---E-ECCCC
T ss_conf 89708888437887640378898899999998679763337999887188960899999--797316-78---8-33885
Q ss_pred CCCCCCCCCCCEE-ECCCCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEEECC------EEEEEEEEEE
Q ss_conf 6544444344300-0012344322201000008999998620462356644544898557------0489998865
Q gi|254780206|r 214 GDIGPNTGGMGAC-SPALGMSQELYSTVIQKIILPTIEGMQKEQNPFQGVLFAGLMITEQ------GPYLIEYNVR 282 (424)
Q Consensus 214 ~d~GpnTGGMGa~-~p~~~~~~~~~~~i~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~~------gp~viE~N~R 282 (424)
T Consensus 199 ~~W~TNtA-rGG~A~P~~---------~~~e~~~La~kA~~avgg~~---~~iDi~Es~~rqndW~GlLV~EVN~~ 261 (289)
T TIGR02144 199 NHWRTNTA-RGGKAEPCK---------IDEEVEELAVKAAEAVGGEV---VGIDIVESKRRQNDWGGLLVNEVNGV 261 (289)
T ss_pred CCHHHHHH-CCCCCCCCC---------CCHHHHHHHHHHHHHHCCEE---EEEEEEECCCCCCCCCCEEEEEECCC
T ss_conf 30255630-588447887---------68768999999999978827---89988643344544378689735689