HHsearch alignment for GI: 254780206 and conserved domain: TIGR02291
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase homolog; InterPro: IPR011758 Members of this protein family contain a region of homology to the RimK family of alpha-L-glutamate ligases (IPR004666 from INTERPRO), various members of which modify the Glu-Glu C-terminus of ribosomal protein S6, or tetrahydromethanopterin, or a form of coenzyme F420 derivative. Members of this family are found so far in various Vibrio and Pseudomonas species and some other gamma and beta Proteobacteria. The function is unknown..
Probab=98.47 E-value=5.1e-07 Score=70.71 Aligned_cols=180 Identities=19% Similarity=0.246 Sum_probs=100.1
Q ss_pred HCCHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHCC-CC-EEEEEECCCCCCCCCCCHHH---------------HHHH
Q ss_conf 0102357888765310111-12234401111121012-42-02563046534300023235---------------6778
Q gi|254780206|r 101 SSKSFAKKFCTKYGIPTAT-YQHFSDPMKAKQYVQNK-SM-PIVVKADGLCAGKGVVVAAT---------------VDEA 162 (424)
Q Consensus 101 ~sK~~~K~~l~~~gIPt~~-~~~~~~~~ea~~~~~~~-g~-PvVVKp~~~agGkGV~i~~~---------------~~e~ 162 (424)
T Consensus 36 DDKl~TK~~A~AaGi~VPelyGVI~~q~ev~~~~~ivkdh~dFVIKPAqGsGG~GIlVit~r~~~ryr~~sG~~i~~eei 115 (320)
T TIGR02291 36 DDKLKTKILAIAAGIAVPELYGVIEIQKEVKSLDDIVKDHEDFVIKPAQGSGGDGILVITDRLDERYRKSSGALISKEEI 115 (320)
T ss_pred CCHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCEECCCCCCCCHHHH
T ss_conf 31367889987336711013010023466543466627889836726606798727997036688403541010154567
Q ss_pred HHHHHHHH------CCCCHHHHHHHHHHCC----CCCEEEECCCCCCCCC--C---CCCCCCCCCCCCCCCCCCCCCE--
Q ss_conf 88788751------4453177788775205----7523442157763103--5---2000111356654444434430--
Q gi|254780206|r 163 TSAIDRCF------QQINSTVIIEEYLEGF----EVSFFALCDGKTAIPF--T---TARDHKRIHDGDIGPNTGGMGA-- 225 (424)
Q Consensus 163 ~~~~~~~~------~~~~~~VliEefl~G~----E~Sv~~i~dG~~~~~l--~---~~~dyKr~~~~d~GpnTGGMGa-- 225 (424)
T Consensus 116 E~hvSniL~GLySLGG~~D~AliEyrvkfDp~F~~~SYeGVPDiRiIVf~GyPVmaM~RlpTr~SdGKANLHQGAvGvGi 195 (320)
T TIGR02291 116 ERHVSNILAGLYSLGGKRDRALIEYRVKFDPLFESVSYEGVPDIRIIVFKGYPVMAMLRLPTRASDGKANLHQGAVGVGI 195 (320)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 78888888777650799773688532010534477111345872689641861021002765678883021246024202
Q ss_pred -----------EE--C---CCCCCCCCCEEE----ECCHHHHHHHHHHHCCCEEEEEEEEEEEEEC-CEEEEEEEEEEEC
Q ss_conf -----------00--0---123443222010----0000899999862046235664454489855-7048999886514
Q gi|254780206|r 226 -----------CS--P---ALGMSQELYSTV----IQKIILPTIEGMQKEQNPFQGVLFAGLMITE-QGPYLIEYNVRFG 284 (424)
Q Consensus 226 -----------~~--p---~~~~~~~~~~~i----~~~i~~~~~~~l~~~~~~y~G~l~~~~m~t~-~gp~viE~N~R~G 284 (424)
T Consensus 196 DlaTG~t~~a~w~n~pi~~HPDTg~~~-sglq~PhW~~ll~LAa~c~el~GLGY~G---vD~VLDke~GPlvLELNARPG 271 (320)
T TIGR02291 196 DLATGKTLRAVWLNQPIEKHPDTGKDV-SGLQVPHWEKLLKLAAECYELVGLGYLG---VDMVLDKEKGPLVLELNARPG 271 (320)
T ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCC-CCEECCCHHHHHHHHHHHHHHCCCCCCC---EEEEEECCCCCEEEEECCCCC
T ss_conf 311450321242067614583888753-5101667778999998775430676002---106874579881786447887