RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780208|ref|YP_003064621.1| hypothetical protein
CLIBASIA_00465 [Candidatus Liberibacter asiaticus str. psy62]
         (66 letters)



>gnl|CDD|181436 PRK08462, PRK08462, biotin carboxylase; Validated.
          Length = 445

 Score = 25.1 bits (55), Expect = 4.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 29  RNRHMSIKILKNTLTTAFISSFKSFISRFLHMIANKD 65
            +R+ +I  +K  L    +   K+ I   L M+ N D
Sbjct: 394 EDRNRAIAKMKRALKEFKVEGIKTTIPFHLEMMENAD 430


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.342    0.145    0.458 

Gapped
Lambda     K      H
   0.267   0.0738    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,029,627
Number of extensions: 48569
Number of successful extensions: 267
Number of sequences better than 10.0: 1
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 7
Length of query: 66
Length of database: 5,994,473
Length adjustment: 37
Effective length of query: 29
Effective length of database: 5,194,977
Effective search space: 150654333
Effective search space used: 150654333
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.5 bits)
S2: 50 (23.0 bits)