HHsearch alignment for GI: 254780212 and conserved domain: cd02949
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=98.21 E-value=2.2e-06 Score=60.63 Aligned_cols=85 Identities=13% Similarity=0.228 Sum_probs=61.9
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99859999651136766311261000000000123333222344432111122221000000001234458998598666
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWKE 108 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~~ 108 (157)
T Consensus 12 s~k~VlV~F~-A~wCgpCk~l~P~l~~la~ey~~~-v~f~kvDv---------------------d~~~~la~~~~I~~- 67 (97)
T cd02949 12 SDRLILVLYT-SPTCGPCRTLKPILNKVIDEFDGA-VHFVEIDI---------------------DEDQEIAEAAGIMG- 67 (97)
T ss_pred CCCEEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCC-EEEEEEEC---------------------CCCHHHHHHCCCCC-
T ss_conf 7994999998-999856564269999999983797-19999968---------------------87988999819931-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHH
Q ss_conf 65576654442107999889997999976888578999999999
Q gi|254780212|r 109 KSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKMV 152 (157)
Q Consensus 109 ~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~i 152 (157)
T Consensus 68 -----------~PT~~~f-k~g~~v~~~~G~~~~---~~l~~~i 96 (97)
T cd02949 68 -----------TPTVQFF-KDKELVKEISGVKMK---SEYREFI 96 (97)
T ss_pred -----------CCEEEEE-ECCEEEEEEECCCCH---HHHHHHH
T ss_conf -----------7789999-999996888888889---9999975