HHsearch alignment for GI: 254780212 and conserved domain: cd02997
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=97.74 E-value=8.6e-05 Score=50.89 Aligned_cols=88 Identities=15% Similarity=0.311 Sum_probs=56.6
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 998599996511367663112610000000001233-3322234443211112222100000000123445899859866
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEES-TILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWK 107 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~g-v~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~ 107 (157)
T Consensus 16 ~~~~vlV~Fy-A~WC~~Ck~~~P~~~~~a~~~~~~~~~~~~~vd~~~-------------------~~~~~l~~~~~V~~ 75 (104)
T cd02997 16 KEKHVLVMFY-APWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTK-------------------PEHDALKEEYNVKG 75 (104)
T ss_pred CCCCEEEEEE-CCCCHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCC-------------------CCCHHHHHHCCCCC
T ss_conf 6998999998-899811115676499999997555887999997563-------------------00787886546455
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHH
Q ss_conf 665576654442107999889997999976888578999999999
Q gi|254780212|r 108 EKSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKMV 152 (157)
Q Consensus 108 ~~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~i 152 (157)
T Consensus 76 ------------~PTi~~f-~~G~~~~~y~G~---r~~e~l~~Fi 104 (104)
T cd02997 76 ------------FPTFKYF-ENGKFVEKYEGE---RTAEDIIEFM 104 (104)
T ss_pred ------------CCEEEEE-ECCEEEEEEECC---CCHHHHHHHC
T ss_conf ------------8789999-899496777778---8989999659