HHsearch alignment for GI: 254780212 and conserved domain: cd03001
>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.
Probab=97.18 E-value=0.0013 Score=43.59 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=52.5
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 99859999651136766311261000000000123333222344432111122221000000001234458998598666
Q gi|254780212|r 29 GGSKIVLYFYPKDDTSGCTAEAINFSSLKADFDEESTILIGISPDSIASHKKFHQKHNLSITLLADESKEVLKSYDVWKE 108 (157)
Q Consensus 29 ~gk~vvl~f~~~~~tp~C~~e~~~l~~~~~~~~~~gv~vv~is~d~~~~~~~~~~~~~~~fpil~D~~~~~~~~~gv~~~ 108 (157)
T Consensus 17 ~~~~vlV~Fy-a~wC~~C~~~~P~~~~~a~~~~~~-~~~a~vd---------------------~~~~~~l~~~~~I~~- 72 (103)
T cd03001 17 SDDVWLVEFY-APWCGHCKNLAPEWKKAAKALKGI-VKVGAVD---------------------ADVHQSLAQQYGVRG- 72 (103)
T ss_pred CCCEEEEEEE-CCCCCCCCCCCHHHHHHHHHHCCC-EEEEEEE---------------------CCHHHHHHHHCCCCE-
T ss_conf 9984999997-898877354484899999980686-2899998---------------------824431144269737-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHH
Q ss_conf 6557665444210799988999799997688857899999999
Q gi|254780212|r 109 KSMFGKKYMGVVRTTFLIDEKGIIAQIWKPVTLKNHAQSVLKM 151 (157)
Q Consensus 109 ~~~~~~~~~~~~r~tfiid~~G~I~~~~~~~~~~~~~~eil~~ 151 (157)
T Consensus 73 -----------~PTi~~f~~G~~~~~~Y~G~---R~~e~l~~F 101 (103)
T cd03001 73 -----------FPTIKVFGAGKNSPQDYQGG---RTAKAIVSA 101 (103)
T ss_pred -----------ECEEEEEECCCCCEEEECCC---CCHHHHHHH
T ss_conf -----------49899996995561576788---999999996