BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780213|ref|YP_003064626.1| hypothetical protein CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62] (63 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|254780213|ref|YP_003064626.1| hypothetical protein CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62] gi|254039890|gb|ACT56686.1| hypothetical protein CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62] Length = 63 Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 63/63 (100%), Positives = 63/63 (100%) Query: 1 MGFITSLSKWDIEVNSILKEEIDDISVVSLPLSDDNMTIDEEYLEKLVVESLDRSLRCNY 60 MGFITSLSKWDIEVNSILKEEIDDISVVSLPLSDDNMTIDEEYLEKLVVESLDRSLRCNY Sbjct: 1 MGFITSLSKWDIEVNSILKEEIDDISVVSLPLSDDNMTIDEEYLEKLVVESLDRSLRCNY 60 Query: 61 EKK 63 EKK Sbjct: 61 EKK 63 >gi|326480030|gb|EGE04040.1| hypothetical protein TEQG_03074 [Trichophyton equinum CBS 127.97] Length = 350 Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 11 DIEVNSILKEEIDDISVVSLPLSDDNMTIDEEYLEKLVVESLDRSLRCN 59 +I + IL DI V+SLP S+DN+TI EYL+ L+ S S+R N Sbjct: 168 NILYSKILSASFTDIKVLSLP-SNDNVTIQPEYLDNLISRS---SIRGN 212 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.313 0.133 0.362 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 496,912,807 Number of Sequences: 13984884 Number of extensions: 13673212 Number of successful extensions: 37848 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 37847 Number of HSP's gapped (non-prelim): 2 length of query: 63 length of database: 4,792,584,752 effective HSP length: 35 effective length of query: 28 effective length of database: 4,303,113,812 effective search space: 120487186736 effective search space used: 120487186736 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 76 (33.9 bits)