RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780213|ref|YP_003064626.1| hypothetical protein CLIBASIA_00490 [Candidatus Liberibacter asiaticus str. psy62] (63 letters) >2qg3_A UPF0130 protein AF_2059; 2648472, uncharacterized protein AF2059, TYW3 like, structural genomics; HET: MSE; 1.95A {Archaeoglobus fulgidus dsm 4304} (A:) Length = 208 Score = 25.6 bits (56), Expect = 2.3 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 10/60 (16%) Query: 4 ITSLSKWDIEVNSILKEEIDDISVVSLPL-SDDNMTIDEEYLEKLVVESLDRSLRCNYEK 62 + SLS + +E+ S+ + E+ P+ +D+ YL +V + ++ L EK Sbjct: 138 VISLSNYVVEIASLERIEL--------PVAEKGLXLVDDAYLSYVVRWANEK-LLKGKEK 188 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.313 0.133 0.362 Gapped Lambda K H 0.267 0.0596 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 471,945 Number of extensions: 16185 Number of successful extensions: 26 Number of sequences better than 10.0: 1 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 5 Length of query: 63 Length of database: 4,956,049 Length adjustment: 31 Effective length of query: 32 Effective length of database: 3,908,094 Effective search space: 125059008 Effective search space used: 125059008 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 50 (23.3 bits)