HHsearch alignment for GI: 254780214 and conserved domain: COG0426
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion].
Probab=98.22 E-value=2.7e-06 Score=58.74 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=72.5
Q ss_pred EEEEEECCCCCCCEEEEEECC-CCHHHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf 699993367789718999879-841566752-----23342059999743524220111024333178211101311202
Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTG-PDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271)
Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G-~d~r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271)
T Consensus 38 SYLI~------~~k~aLID~~~~~f~~~~l~~l~~~id~k~iDYIi~~H~ePDhsg~l~~ll~~~----p~a~ii~s~~~ 107 (388)
T COG0426 38 SYLIV------GDKTALIDTVGEKFFDEYLENLSKYIDPKEIDYIIVNHTEPDHSGSLPELLELA----PNAKIICSKLA 107 (388)
T ss_pred EEEEE------CCCEEEECCCCCCHHHHHHHHHHHHCCHHCCEEEEECCCCCCHHHHHHHHHHHC----CCCEEEEEHHH
T ss_conf 58996------796799889980169999999986348001719997888963354699999868----89789963899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC-CCEEEECC
Q ss_conf 3210022221013667753100123211234433342011587489999995077621123346-86253032
Q gi|254780214|r 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCTD 186 (271)
Q Consensus 115 ~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~D 186 (271)
T Consensus 108 ~~~L~~~~~~----~~--------~---~~ivk~Gd~ldlGg~tL~Fi~ap~LHWPd~m~TYd~~~kILFS~D 165 (388)
T COG0426 108 ARFLKGFYHD----PE--------W---FKIVKTGDTLDLGGHTLKFIPAPFLHWPDTMFTYDPEDKILFSCD 165 (388)
T ss_pred HHHHHHHCCC----CC--------C---EEECCCCCEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEECCC
T ss_conf 9999974488----54--------1---363478877644894799995787779873367624775777146