HHsearch alignment for GI: 254780214 and conserved domain: COG0595
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].
Probab=99.67 E-value=1.1e-15 Score=117.17 Aligned_cols=168 Identities=25% Similarity=0.318 Sum_probs=102.1
Q ss_pred CEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHH-------------HHHH
Q ss_conf 725999985417896513378878777787677444306999933677897189998798415-------------6675
Q gi|254780214|r 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY-------------MQVL 69 (271)
Q Consensus 3 ~~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r-------------~ql~ 69 (271)
T Consensus 7 ~~i~i~~lG-----G~~EiGkN~----------------~vve~-----~~~i~i~D~G~~fp~~~~~gvDliIPd~~yl 60 (555)
T COG0595 7 AKIKIFALG-----GVGEIGKNM----------------YVVEY-----GDDIIILDAGLKFPEDDLLGVDLIIPDFSYL 60 (555)
T ss_pred CCEEEEEEC-----CHHHHCCCE----------------EEEEE-----CCCEEEEECCCCCCCCCCCCCCEEECCHHHH
T ss_conf 855899805-----810222623----------------89997-----8968999776566864355555882582774
Q ss_pred HCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22334205999974352422011102433317821110131120232100222210136677531001232112344333
Q gi|254780214|r 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 (271)
Q Consensus 70 ~~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T Consensus 61 ~~n~~kvkgI~lTHgHeDHIGaip----~ll~~~~~~piy~s~lt~~Li~~k~~~---~---~~~~-----~~~~~~ev~ 125 (555)
T COG0595 61 EENKDKVKGIFLTHGHEDHIGALP----YLLKQVLFAPIYASPLTAALIKEKLKE---H---GLFK-----NENELHEVK 125 (555)
T ss_pred HHCCCCCEEEEECCCCHHHCCCHH----HHHHCCCCCCEECCHHHHHHHHHHHHH---H---CCCC-----CCCCEEEEC
T ss_conf 315002139994687444323467----898527768444477669999989887---3---2113-----567439947
Q ss_pred CCEECCCCCEEEEEEEEECCCEECCCCCC----CCEEEECCCCCCHH--------H--HHH-HH-CCHHEEEEECCCCC
Q ss_conf 42011587489999995077621123346----86253032330016--------7--888-62-22110253023357
Q gi|254780214|r 150 ICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA--------E--SLE-KL-QNLDFLIIDALKNG 212 (271)
Q Consensus 150 ~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri----~~~~Y~~Dt~~~~e--------~--~~~-~l-~~~D~lI~d~l~~~ 212 (271)
T Consensus 126 ~~~~i~~~~~~v~f~~vtHSIPds~g~~i~Tp~G~Iv~TGDFk-~d~~~~~g~~~d~~r~~~~g~eGVl~LisdsTna~ 203 (555)
T COG0595 126 PGSEIKFGSFEVEFFPVTHSIPDSLGIVIKTPEGNIVYTGDFK-FDPTPVDGEPTDLARLAEIGKEGVLALISDSTNAE 203 (555)
T ss_pred CCCEEEECCEEEEEEEECCCCCCCEEEEEECCCCCEEEECCEE-ECCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 9985776767999996035574516899987984389968778-55886777767889999746678479995786568