HHsearch alignment for GI: 254780214 and conserved domain: PRK05452
>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional.
Probab=97.55 E-value=0.00016 Score=47.77 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=70.5
Q ss_pred EEEEEECCCCCCCEEEEEECC-CCHHHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEE
Q ss_conf 699993367789718999879-841566752-----23342059999743524220111024333178211101311202
Q gi|254780214|r 41 SLKISRVSERGSNTTVIVDTG-PDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 (271)
Q Consensus 41 s~~i~~~~~~~~~~~iLiD~G-~d~r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~ 114 (271)
T Consensus 37 SYLI~------deK~aLIDtv~~~f~~e~l~~L~~~id~~~IDYIIvnH~EpDHSGsL~~Lle~----~P~~~Iv~s~~a 106 (479)
T PRK05452 37 SYLIR------EEKNVLIDTVDHKFSREFVQNLRMEIDLADIDYIVINHAEEDHAGALTELMAQ----IPDTPIYCTANA 106 (479)
T ss_pred EEEEC------CCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH----CCCCEEEECHHH
T ss_conf 36984------89889992997628999999999745966798899689997547689999998----899999987899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC-CCCEEEEEEEEECCCEECCCCCC-CCEEEECC
Q ss_conf 32100222210136677531001232112344333420115-87489999995077621123346-86253032
Q gi|254780214|r 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRF-GNVAYCTD 186 (271)
Q Consensus 115 ~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~D 186 (271)
T Consensus 107 ~~~l~~~~~~----~~-------~~~~vVk~G---d~LdLG~GktL~Fi~tPmlHWPDsM~TY~~edkILFS~D 166 (479)
T PRK05452 107 IDSINGHHHH----PE-------WNFNVVKTG---DTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSND 166 (479)
T ss_pred HHHHHHHHCC----CC-------CCEEEECCC---CEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECC
T ss_conf 9999985278----76-------673784689---857269984689961898778873268862675686125