HHsearch alignment for GI: 254780214 and conserved domain: PRK11539
>PRK11539 hypothetical protein; Provisional.
Probab=98.82 E-value=2.1e-07 Score=65.58 Aligned_cols=63 Identities=24% Similarity=0.416 Sum_probs=45.5
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCC-----HHHH-----HHHCCC
Q ss_conf 259999854178965133788787777876774443069999336778971899987984-----1566-----752233
Q gi|254780214|r 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-----FYMQ-----VLREQV 73 (271)
Q Consensus 4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d-----~r~q-----l~~~~i 73 (271)
T Consensus 498 ~~~v~~LDVGQ------------------------G~avlI~~-----~~~~~L~DtG~~~~~~~~g~~vi~P~L~~~Gi 548 (754)
T PRK11539 498 EWRVDMLDVGQ------------------------GLAMVIER-----NGKAILYDTGNAWPEGDSAQQVIIPWLRWHNL 548 (754)
T ss_pred CCEEEEEECCC------------------------CEEEEEEE-----CCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 60899997278------------------------51899998-----99789995799888887237788999996799
Q ss_pred CCCCEEEEECCCHHHHHHCCHHH
Q ss_conf 42059999743524220111024
Q gi|254780214|r 74 LSIDAVLYTHPHADHIHGIDGLR 96 (271)
Q Consensus 74 ~~Id~I~iTH~H~DHi~Gl~~Lr 96 (271)
T Consensus 549 -~lD~lvlSH~D~DH~GGl~~ll 570 (754)
T PRK11539 549 -TPEGVILSHEHLDHRGGLASLL 570 (754)
T ss_pred -CCEEEEECCCCCCCCCCHHHHH
T ss_conf -7208994588500126899999