HHsearch results for GI: 254780214 and protein with PDBid: 1vjn_A
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.51 E-value=4.7e-13 Score=99.38 Aligned_cols=154 Identities=18% Similarity=0.214 Sum_probs=98.6
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEC
Q ss_conf 25999985417896513378878777787677444306999933677897189998798415667522334205999974
Q gi|254780214|r 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH 83 (271)
Q Consensus 4 ~m~l~~LGtg~s~g~P~~~c~c~~C~~~~~~~~R~~~s~~i~~~~~~~~~~~iLiD~G~d~r~ql~~~~i~~Id~I~iTH 83 (271)
-||||+||. +|++|+. ++.+||||.-.... -.....-++|+|++||
T Consensus 12 ~MkIt~lGh---------------------------s~~lIe~-----~g~~ILiDP~~~~~--~~~~~~~~~D~VliSH 57 (220)
T 1vjn_A 12 HMKITWFGH---------------------------ACFALEM-----EGKTIVTDPFDESV--GYPIPNVTADVVTESH 57 (220)
T ss_dssp CEEEEEEET---------------------------TEEEEEE-----TTEEEEESCCC-------CCCCCBCSEEECSS
T ss_pred EEEEEEEEC---------------------------CEEEEEE-----CCEEEEECCCCCCC--CCCCCCCCCCEEEECC
T ss_conf 189999703---------------------------1999998-----99999989998877--8987778788999668
Q ss_pred CCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEE
Q ss_conf 35242201110243331782111013112023210022221013667753100123211234433342011587489999
Q gi|254780214|r 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 (271)
Q Consensus 84 ~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~ 163 (271)
.|.||... . .. .+.+ .+ . .. .... ..++++++.
T Consensus 58 ~H~DH~~~--~----~~-~~~~-~v------~---~~----------------------------~g~~--~~~~~~I~~ 90 (220)
T 1vjn_A 58 QHFDHNAH--H----LV-KGNF-RV------I---DR----------------------------PGAY--TVNGVKIKG 90 (220)
T ss_dssp CC---CGG--G----GC-BSSC-EE------E---CS----------------------------SEEE--EETTEEEEE
T ss_pred CCCCCCCH--H----HC-CCCE-EE------E---CC----------------------------CCEE--EECCEEECC
T ss_conf 78676751--2----31-4626-99------6---04----------------------------5659--979822124
Q ss_pred EEEECCC------EECCCCCCC----CEEEECCCCCCHH-HHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 9950776------211233468----6253032330016-7888622211025302335768875799999999997299
Q gi|254780214|r 164 ILQQHGR------ISSLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINP 232 (271)
Q Consensus 164 ~~~~Hg~------~~~~Gyri~----~~~Y~~Dt~~~~e-~~~~~l~~~D~lI~d~l~~~~~~~H~~~~ea~~~~~~~~~ 232 (271)
++..|.+ ..++||.++ ++.|++|+...+. +.+..+.++|++++.. + .+.||+.+||+++++.++|
T Consensus 91 v~a~H~~~~~~~~g~~~~~~ie~~g~~I~~~GDt~~~~~~~~~~~~~~~Dva~lPi---g-g~~~m~~~eA~~~~~~l~p 166 (220)
T 1vjn_A 91 VETFHDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPV---G-GTYTIGPKEAKEVADLLNA 166 (220)
T ss_dssp EEEEEC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEEC---C-SSSSCCHHHHHHHHHHTTC
T ss_pred CCCEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEC---C-CCCCCCHHHHHHHHHHHCC
T ss_conf 32065188885478757999984992999968988898999998528976899944---9-9653899999999997099
Q ss_pred CEEEEECCCC
Q ss_conf 7799976888
Q gi|254780214|r 233 KNAILTHMHV 242 (271)
Q Consensus 233 k~~~LtHls~ 242 (271)
|.++-+|...
T Consensus 167 k~vIP~H~~t 176 (220)
T 1vjn_A 167 KVIIPMHYKT 176 (220)
T ss_dssp SEEEEESCCC
T ss_pred CEEEEEECCC
T ss_conf 9999970599