HHsearch results for GI: 254780214 and protein with PDBid: 2q9u_A
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.86 E-value=1.4e-09 Score=77.89 Aligned_cols=117 Identities=16% Similarity=0.228 Sum_probs=62.5
Q ss_pred CEEEEEECCCC-HHHHHHH-----CCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
Q ss_conf 71899987984-1566752-----23342059999743524220111024333178211101311202321002222101
Q gi|254780214|r 53 NTTVIVDTGPD-FYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 (271)
Q Consensus 53 ~~~iLiD~G~d-~r~ql~~-----~~i~~Id~I~iTH~H~DHi~Gl~~Lr~~~~~~~~~i~vy~~~~~~~~l~~~~~y~f 126 (271)
++.+|||+|.. ...++++ .+.++|++|++||.|.||++|++.|. ..-...+||+++.+.+.+...+..
T Consensus 49 e~~vLIDtg~~~~~~~~l~~i~~~i~~~~I~~II~TH~H~DH~ggl~~l~----~~~p~a~i~~~~~~~~~~~~~~~~-- 122 (414)
T 2q9u_A 49 ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHY----HKFTNATFVCTKKCQEHLKILYGM-- 122 (414)
T ss_dssp SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHG----GGSTTCEEEECHHHHHHHHHHHCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHH----HHCCCCEEEECHHHHHHHHHHCCC--
T ss_conf 98899909980169999999997569877998996909664760299999----878898799758999888874389--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCEECCCCCC-CCEEEECCC
Q ss_conf 3667753100123211234433342011587489999995077621123346-862530323
Q gi|254780214|r 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCTDV 187 (271)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~Hg~~~~~Gyri-~~~~Y~~Dt 187 (271)
.... .... .........+..+++.+.+..|.+....-|.- .++.|++|.
T Consensus 123 ---~~~~------~~~~---~~g~~l~lg~~~l~~i~~p~gH~~~~~~~y~~~~~iLfsGD~ 172 (414)
T 2q9u_A 123 ---EKAT------WLIV---DDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCPEDKILFSNDG 172 (414)
T ss_dssp ---TTCC------EEEC---CTTCCEECSSCEEEEEECTTSSSTTCEEEEETTTTEEEEETT
T ss_pred ---CCCC------EEEE---CCCCEEEECCEEEEEECCCCCCCCCCEEEEECCCCCEEECCC
T ss_conf ---8652------5871---589889756558999703689868978999989896894574