BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] (271 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039891|gb|ACT56687.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT Sbjct: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE Sbjct: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN Sbjct: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM Sbjct: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP Sbjct: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 >gi|315122343|ref|YP_004062832.1| metal-dependent hydrolase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495745|gb|ADR52344.1| metal-dependent hydrolase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 269 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 221/270 (81%), Positives = 242/270 (89%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKD+Y+FTILGC AS GVPRITGDWG CDP NPKNRRTRSSLK+SRVSERG +TTVI+DT Sbjct: 1 MKDFYYFTILGCSASPGVPRITGDWGLCDPKNPKNRRTRSSLKVSRVSERGGDTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDFYMQ+LRE+VLSIDAVLYTH HADH+HGIDGLRGYFL+QK PIDVYAAPDCM++L Sbjct: 61 GPDFYMQMLREKVLSIDAVLYTHEHADHVHGIDGLRGYFLQQKHPIDVYAAPDCMENLVN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SF YCFKA + +Y PI NP +IE DVPI +K AGGVIEAIPILQ+HG+ISSLGFRF N Sbjct: 121 SFGYCFKAPEGSSYLPIANPRIIE-KDVPISVKGAGGVIEAIPILQRHGKISSLGFRFSN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN+FP ESLEKLQNLDFLIIDAL+NGLH SHFSLSESLKKI+LINPKNAILTHM Sbjct: 180 VAYCTDVNSFPDESLEKLQNLDFLIIDALRNGLHGSHFSLSESLKKIDLINPKNAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 HVDLDYD V +STPSRVVPAFDGM F S I Sbjct: 240 HVDLDYDKVFRSTPSRVVPAFDGMHFKSLI 269 >gi|86357773|ref|YP_469665.1| metal-dependent hydrolase protein [Rhizobium etli CFN 42] gi|86281875|gb|ABC90938.1| probable metal-dependent hydrolase protein [Rhizobium etli CFN 42] Length = 272 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/262 (57%), Positives = 185/262 (70%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + + G TTV++DTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFAPDGGVTTVVIDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + +YA M L E+F YC Sbjct: 67 QMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIYADQFTMDRLREAFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I+SLGFR G VAYC+D Sbjct: 127 ETPPGSNYPPIVLPVVIENLDEPLEIRGPGGKIDFFPHIQQHGDINSLGFRIGGVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 187 ISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLRPKRAILTHMHTPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 D V+ TP VVPAFD M F + Sbjct: 247 DAVMAQTPDHVVPAFDQMSFET 268 >gi|116252218|ref|YP_768056.1| hypothetical protein RL2471 [Rhizobium leguminosarum bv. viciae 3841] gi|115256866|emb|CAK07960.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 272 Score = 311 bits (797), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 148/264 (56%), Positives = 185/264 (70%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E+F YC Sbjct: 67 QMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLREAFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV PIVIEN D P+ + GG I P +QQHG I SLGFR G+VAYC+D Sbjct: 127 ETPPGSNYPPIVLPIVIENLDAPVEIHGPGGTIAFHPHIQQHGDIHSLGFRIGDVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 187 ISDFPPQTVEKLQNLDMLIIDALQYTYHPSHLSLEQSLDWISRLKPKRAILTHMHTPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D+V+ TP VVPA+D M F + + Sbjct: 247 DVVMAETPDHVVPAYDQMSFETEV 270 >gi|190891832|ref|YP_001978374.1| probable metal-dependent hydrolase protein [Rhizobium etli CIAT 652] gi|218510441|ref|ZP_03508319.1| probable metal-dependent hydrolase protein [Rhizobium etli Brasil 5] gi|190697111|gb|ACE91196.1| probable metal-dependent hydrolase protein [Rhizobium etli CIAT 652] Length = 271 Score = 311 bits (796), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 151/261 (57%), Positives = 184/261 (70%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + G TTV+VDTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGPDGV-TTVVVDTGPDFRE 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E+FRYC Sbjct: 66 QMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLREAFRYCL 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGFR G+VAYC+D Sbjct: 126 ETPPGSNYPPIVLPVVIENIDEPVEIRGPGGKIDFYPHIQQHGDIQSLGFRIGDVAYCSD 185 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 186 ISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHMHTPLDY 245 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 D V+ TP VVPAFD M F Sbjct: 246 DAVMGETPEHVVPAFDQMSFE 266 >gi|209549394|ref|YP_002281311.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535150|gb|ACI55085.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 274 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 147/264 (55%), Positives = 187/264 (70%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPANPKNRRTRAAFMVQQFAPDGGVTTVVIDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E+F YC Sbjct: 67 QMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLREAFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P+VIEN D P+ ++ GG I+ P LQQHG I SLGFR G+VAYC+D Sbjct: 127 ETPPGSNYPPIVLPVVIENLDEPVEIRGPGGKIQFHPHLQQHGDIYSLGFRIGDVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 187 ISDFPPQTVDKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHMHTPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D+V+ TP VVPA+D M F + + Sbjct: 247 DVVMAETPDHVVPAYDQMSFETEV 270 >gi|241204711|ref|YP_002975807.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858601|gb|ACS56268.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 274 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 148/264 (56%), Positives = 184/264 (69%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E+F YC Sbjct: 67 QMIRSGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLREAFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPIV PIVIEN D P+ + GG I P +QQHG I SLGFR G+VAYC+D Sbjct: 127 ATPPGSNYPPIVLPIVIENLDAPLEIHGPGGTIAFHPHIQQHGDIHSLGFRIGDVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 187 ISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKQAILTHMHTPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D+V+ TP VVPA+D M F + + Sbjct: 247 DVVMAETPDHVVPAYDQMSFETEV 270 >gi|222148594|ref|YP_002549551.1| metal dependent hydrolase [Agrobacterium vitis S4] gi|221735580|gb|ACM36543.1| metal dependent hydrolase [Agrobacterium vitis S4] Length = 272 Score = 307 bits (787), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 148/265 (55%), Positives = 186/265 (70%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRI GDWG CDP NPKNRRTR+S I ++S G T V+VDTGPDF Sbjct: 7 FTILGCSSSPGVPRINGDWGDCDPLNPKNRRTRASFLIEQISPDGGKTVVLVDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R V S+DAV+Y+H HADH+HGID LRGY L Q+ I +YA P+ M+ + F YC Sbjct: 67 QMIRAGVQSLDAVVYSHAHADHLHGIDDLRGYSLMQRGRIPIYAEPETMRRIETGFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K D YPPIV P +IE+ D I + AGG I +P+ QQHG I SLGFR G+VAYC+D Sbjct: 127 KTPDGSNYPPIVRPHIIEDMDSLIEIDGAGGRIALMPLEQQHGDIISLGFRIGDVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP +++ +L LD L+IDAL+ H SH SLS+SL I+ + PK AILTHMH+ LDY Sbjct: 187 VSDFPEKTVPRLAGLDVLVIDALQYREHPSHLSLSQSLAWIDRLAPKRAILTHMHIPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPIP 271 + VL+ TP V PA+D MQF +P Sbjct: 247 ETVLRETPDHVEPAYDQMQFELTLP 271 >gi|218463184|ref|ZP_03503275.1| probable metal-dependent hydrolase protein [Rhizobium etli Kim 5] Length = 271 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 147/264 (55%), Positives = 186/264 (70%), Gaps = 1/264 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + TTV+VDTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGP-DRVTTVVVDTGPDFRE 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E+FRYC Sbjct: 66 QMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLREAFRYCL 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P+VI+N D P+ ++ GG I+ P +QQHG I SLGFR G+VAYC+D Sbjct: 126 ETPPGSNYPPIVLPVVIKNIDEPVEIRGPGGKIDFYPHIQQHGDIHSLGFRIGDVAYCSD 185 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ FP +++EKLQ+LD L+IDAL+ H SH SL +SL I + PK AILTHMH LDY Sbjct: 186 ISDFPPQTVEKLQDLDVLVIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHMHTPLDY 245 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D+V+ TP VVPA+D M F + I Sbjct: 246 DVVMAETPDHVVPAYDQMSFETEI 269 >gi|159184781|ref|NP_354500.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] gi|159140069|gb|AAK87285.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] Length = 274 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 141/264 (53%), Positives = 181/264 (68%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGC +S GVPRI GDWGACDP NP+NRRTR++ + ++ G TTV++DTGPDF Sbjct: 8 FTVLGCASSPGVPRINGDWGACDPQNPRNRRTRAAFMVEQIGPDGGKTTVVIDTGPDFRE 67 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ +V ++DAVLYTH HADH+HGID LR YF QK I ++A P M + + F YC Sbjct: 68 QMIAAKVQAVDAVLYTHAHADHLHGIDDLRIYFALQKSRIPIWADPVTMARIRDGFAYCL 127 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P +I + + P+ + AGG I +QQHG + SLGFR G+VAYCTD Sbjct: 128 ETPAGSNYPPIVRPQLIADINDPVIIDGAGGPIPFKVHMQQHGDVHSLGFRIGDVAYCTD 187 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FPAESL KL LD L+IDAL+ H SH SL ++L IE + PK AILTHMH+ LDY Sbjct: 188 VSDFPAESLPKLTGLDVLVIDALQYRYHPSHLSLEQALGWIEALAPKRAILTHMHIPLDY 247 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D V++ TP V PA+D M+F I Sbjct: 248 DTVMRETPDHVEPAYDQMRFEVEI 271 >gi|325292847|ref|YP_004278711.1| metal dependent hydrolase [Agrobacterium sp. H13-3] gi|325060700|gb|ADY64391.1| metal dependent hydrolase [Agrobacterium sp. H13-3] Length = 276 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 138/261 (52%), Positives = 180/261 (68%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGC +S GVPRI GDWGACDP NP+NRRTR++ + ++ G TTV++DTGPDF Sbjct: 8 FTVLGCSSSPGVPRINGDWGACDPENPRNRRTRAAFMVEQIGPDGGKTTVVIDTGPDFRE 67 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ +V ++DAVLYTH HADH+HGID LR YF Q+ I +YA P M +++ F YC Sbjct: 68 QMIAAKVEAVDAVLYTHAHADHLHGIDDLRIYFAIQQSRIPIYADPVTMARIWDGFAYCL 127 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPIV P +I + D + + AGG I +QQHG + SLGFR GNVAYCTD Sbjct: 128 ETPPGSSYPPIVEPRIIADIDATLIIDGAGGSIPFNVHMQQHGDVHSLGFRIGNVAYCTD 187 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP ES+ KL LD L+IDAL++ H SH SL ++L I+ PK AILTHMH+ LDY Sbjct: 188 VSDFPVESVPKLAGLDVLVIDALQHRYHPSHLSLEQALGWIDRFAPKRAILTHMHIPLDY 247 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 D V++ TP V PA+D M+F Sbjct: 248 DTVMRETPDHVEPAYDQMRFE 268 >gi|239831995|ref|ZP_04680324.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239824262|gb|EEQ95830.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 274 Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 144/264 (54%), Positives = 181/264 (68%), Gaps = 1/264 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG+CDP NPKNRR R+SL + R G +TTV++DTGPDF Sbjct: 12 FTLLGCGSSPGVPRINGDWGSCDPQNPKNRRRRASLLVERFDIDGKSTTVVIDTGPDFRA 71 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ S+DA +YTHPHADHIHGID LR Y ++ +R +DVYA LFE+F YCF Sbjct: 72 QMIDAGAHSLDAAVYTHPHADHIHGIDDLRTYVVENRRLMDVYANRLTRNRLFEAFGYCF 131 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P + AGG I P Q HG I SLGFR G+V YCTD Sbjct: 132 ETPAGSSYPPILSMHDIA-PETPFSISGAGGAIRFEPFSQMHGDIESLGFRIGSVVYCTD 190 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL L D LIIDAL+ H SHFSLSE+L+ IE + PK A+LTHMHV LDY Sbjct: 191 VSAFPEQSLNYLGGADVLIIDALQYRPHPSHFSLSEALEWIEKLAPKRAVLTHMHVPLDY 250 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + VL+ TP V P +DG++F P+ Sbjct: 251 ETVLRETPDNVEPGYDGLRFEVPL 274 >gi|227822150|ref|YP_002826121.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] gi|227341150|gb|ACP25368.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] Length = 278 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 138/264 (52%), Positives = 184/264 (69%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPRITGDWGACDP+NP+NRR+R++L + +++ G TTV++DTGPDF Sbjct: 7 FTILGCGSSPGVPRITGDWGACDPSNPRNRRSRAALLVEQIAPDGGRTTVVIDTGPDFRS 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAVLYTH HADH+HGID LRG+ ++ ++ + ++A M + + FRYC Sbjct: 67 QMVAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRKRVPIWADAFTMGRIRDGFRYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YPPIV P VI + + ++ AGG IE P++Q HG I SLGFR GN AYC+D Sbjct: 127 ESPPGSGYPPIVEPHVIPEDLPLVSVRGAGGPIEFQPLMQFHGNIHSLGFRVGNFAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP E++ KL+ LD L+ID L+ H SH SL +SL IE + PK A+LTHMHV LDY Sbjct: 187 VSDFPTETVGKLEGLDLLVIDTLQYKFHPSHLSLVQSLGWIERLQPKRAVLTHMHVPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D+V TP V PA+D M+ I Sbjct: 247 DVVRDETPDHVEPAYDMMRLEFEI 270 >gi|319783481|ref|YP_004142957.1| hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169369|gb|ADV12907.1| hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 275 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 184/269 (68%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S G PRITGDWG CDP NP+NRRTR++ + R++ GS TTV++DT Sbjct: 1 MTDRLRLTILGCGSSPGTPRITGDWGNCDPDNPRNRRTRAAALVERIAANGSRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V +DAV+YTHPHADHIHGID LRG+ L Q++ IDV+A M L E Sbjct: 61 GPDFRQQMLLAGVKRVDAVVYTHPHADHIHGIDDLRGFVLDQRQLIDVHADRATMLRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV P +I++ P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPQGSSYPPIVRPHLIDHTR-PVVVEGEGGTLTLEPLPQIHGDIVSLGFRIGG 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP + E+L +LD LIIDAL+ H SH SL E+L+ I+ + P +A+LTHM Sbjct: 180 LAYCPDISDFPEPTAERLGDLDVLIIDALQYRTHPSHLSLGEALEWIQRLAPIHAVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V+ TP+ V PA+DGM P Sbjct: 240 HVPLDYVSVMAETPANVEPAYDGMVIEIP 268 >gi|153009411|ref|YP_001370626.1| beta-lactamase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561299|gb|ABS14797.1| beta-lactamase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 272 Score = 291 bits (745), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 141/269 (52%), Positives = 184/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+ FT+LGCG+S GVPRI GDWG+CDP NP+N+R R+SL + R + G++TTV++DTG Sbjct: 5 KNCLRFTVLGCGSSPGVPRINGDWGSCDPHNPRNKRRRASLLVERFDDTGNSTTVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q++ S+DA +YTHPHADHIHG+D LR Y ++ +R +DVYA LFE+ Sbjct: 65 PDFRAQMIDAGAHSLDAAVYTHPHADHIHGVDDLRTYVVENRRLMDVYANRLTRNRLFEA 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P + AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPAGSSYPPILSMHDIA-PETPFSISGAGGPIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ L D LIIDAL+ H SHFSL E+L+ IE + PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLKHLGGADVLIIDALQYRPHPSHFSLGEALEWIEKLAPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F P Sbjct: 244 VPLDYETVMRETPGNVEPGYDGLRFEVPF 272 >gi|163760144|ref|ZP_02167227.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] gi|162282543|gb|EDQ32831.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] Length = 274 Score = 291 bits (744), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 137/261 (52%), Positives = 178/261 (68%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGC +S GVPR+ GDWGACDP NPKNRRTR++ IS++ G TTV VDTGPDF Sbjct: 9 FTVLGCASSPGVPRVNGDWGACDPQNPKNRRTRAAFLISQIGPDGGETTVAVDTGPDFRE 68 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ +V S+DAV+YTH HADH+HGID LRG+ L Q++ I +YA P+ M + F YC Sbjct: 69 QMIVNKVHSLDAVIYTHSHADHVHGIDDLRGFALSQRKRIPIYADPETMARIRAGFGYCL 128 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI P +I + D PI + AGG I P+ Q HG I SLG+R G+VAYC D Sbjct: 129 ETPPGSEYPPITEPRLINSLDDPILIDGAGGTIAIQPLDQVHGSIRSLGYRIGDVAYCCD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP ++E+LQ LD LIID L+ H SH S+ ++L I+ ++PK A LTHMHV LDY Sbjct: 189 VSDFPRATVERLQGLDTLIIDCLQYKPHPSHLSIDQALWWIKRLDPKRAYLTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V TP+RV P +DG+ F Sbjct: 249 ETVANETPARVEPCYDGLTFE 269 >gi|294979848|pdb|3MD7|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Gmp From Brucella Melitensis Length = 293 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 31 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 90 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 91 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 150 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 151 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 209 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 210 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 269 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 270 ETVMRETPHHVEPGYDGLRFE 290 >gi|256061089|ref|ZP_05451244.1| Beta-lactamase-like protein [Brucella neotomae 5K33] gi|261325091|ref|ZP_05964288.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] gi|261301071|gb|EEY04568.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] Length = 272 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTHNRLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLQHIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|17987268|ref|NP_539902.1| PHNP protein [Brucella melitensis bv. 1 str. 16M] gi|225852502|ref|YP_002732735.1| beta-lactamase domain-containing protein [Brucella melitensis ATCC 23457] gi|256044657|ref|ZP_05447561.1| beta-lactamase domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113544|ref|ZP_05454370.1| beta-lactamase domain protein [Brucella melitensis bv. 3 str. Ether] gi|256264007|ref|ZP_05466539.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|260564003|ref|ZP_05834489.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|265991081|ref|ZP_06103638.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994917|ref|ZP_06107474.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|17982945|gb|AAL52166.1| phnp protein [Brucella melitensis bv. 1 str. 16M] gi|225640867|gb|ACO00781.1| beta-lactamase domain protein [Brucella melitensis ATCC 23457] gi|260154019|gb|EEW89111.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|262766030|gb|EEZ11819.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263001865|gb|EEZ14440.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094151|gb|EEZ18073.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326409018|gb|ADZ66083.1| beta-lactamase domain-containing protein [Brucella melitensis M28] gi|326538728|gb|ADZ86943.1| beta-lactamase domain protein [Brucella melitensis M5-90] Length = 272 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFQPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|23501878|ref|NP_698005.1| hypothetical protein BR0997 [Brucella suis 1330] gi|62289921|ref|YP_221714.1| hypothetical protein BruAb1_1003 [Brucella abortus bv. 1 str. 9-941] gi|82699848|ref|YP_414422.1| beta-lactamase-like protein [Brucella melitensis biovar Abortus 2308] gi|148560492|ref|YP_001258938.1| hypothetical protein BOV_0964 [Brucella ovis ATCC 25840] gi|161618951|ref|YP_001592838.1| beta-lactamase domain-containing protein [Brucella canis ATCC 23365] gi|163843266|ref|YP_001627670.1| beta-lactamase domain-containing protein [Brucella suis ATCC 23445] gi|189024163|ref|YP_001934931.1| Beta-lactamase-like protein [Brucella abortus S19] gi|225627474|ref|ZP_03785511.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237815422|ref|ZP_04594420.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689228|ref|ZP_05152482.1| Beta-lactamase-like protein [Brucella abortus bv. 6 str. 870] gi|254693713|ref|ZP_05155541.1| Beta-lactamase-like protein [Brucella abortus bv. 3 str. Tulya] gi|254697363|ref|ZP_05159191.1| Beta-lactamase-like protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701749|ref|ZP_05163577.1| Beta-lactamase-like protein [Brucella suis bv. 5 str. 513] gi|254704291|ref|ZP_05166119.1| Beta-lactamase-like protein [Brucella suis bv. 3 str. 686] gi|254706807|ref|ZP_05168635.1| Beta-lactamase-like protein [Brucella pinnipedialis M163/99/10] gi|254710083|ref|ZP_05171894.1| Beta-lactamase-like protein [Brucella pinnipedialis B2/94] gi|254730261|ref|ZP_05188839.1| Beta-lactamase-like protein [Brucella abortus bv. 4 str. 292] gi|256031579|ref|ZP_05445193.1| Beta-lactamase-like protein [Brucella pinnipedialis M292/94/1] gi|256159717|ref|ZP_05457464.1| Beta-lactamase-like protein [Brucella ceti M490/95/1] gi|256254979|ref|ZP_05460515.1| Beta-lactamase-like protein [Brucella ceti B1/94] gi|256257478|ref|ZP_05463014.1| Beta-lactamase-like protein [Brucella abortus bv. 9 str. C68] gi|260168709|ref|ZP_05755520.1| Beta-lactamase-like protein [Brucella sp. F5/99] gi|260545330|ref|ZP_05821071.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260566462|ref|ZP_05836932.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260754733|ref|ZP_05867081.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260757956|ref|ZP_05870304.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761779|ref|ZP_05874122.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883754|ref|ZP_05895368.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261213985|ref|ZP_05928266.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261222165|ref|ZP_05936446.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|261314274|ref|ZP_05953471.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317632|ref|ZP_05956829.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261752302|ref|ZP_05996011.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261754959|ref|ZP_05998668.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261758186|ref|ZP_06001895.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|265988667|ref|ZP_06101224.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265998130|ref|ZP_06110687.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|294852411|ref|ZP_06793084.1| PhnP protein [Brucella sp. NVSL 07-0026] gi|297248322|ref|ZP_06932040.1| PhnP protein [Brucella abortus bv. 5 str. B3196] gi|306843872|ref|ZP_07476467.1| Beta-lactamase-like protein [Brucella sp. BO1] gi|23347817|gb|AAN29920.1| conserved hypothetical protein [Brucella suis 1330] gi|62196053|gb|AAX74353.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615949|emb|CAJ10972.1| Beta-lactamase-like [Brucella melitensis biovar Abortus 2308] gi|148371749|gb|ABQ61728.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|161335762|gb|ABX62067.1| beta-lactamase domain protein [Brucella canis ATCC 23365] gi|163673989|gb|ABY38100.1| beta-lactamase domain protein [Brucella suis ATCC 23445] gi|189019735|gb|ACD72457.1| Beta-lactamase-like protein [Brucella abortus S19] gi|225617479|gb|EEH14524.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237790259|gb|EEP64469.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260096737|gb|EEW80612.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260155980|gb|EEW91060.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260668274|gb|EEX55214.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672211|gb|EEX59032.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674841|gb|EEX61662.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873282|gb|EEX80351.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915592|gb|EEX82453.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260920749|gb|EEX87402.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|261296855|gb|EEY00352.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261303300|gb|EEY06797.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738170|gb|EEY26166.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|261742055|gb|EEY29981.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261744712|gb|EEY32638.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|262552598|gb|EEZ08588.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|264660864|gb|EEZ31125.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294821000|gb|EFG37999.1| PhnP protein [Brucella sp. NVSL 07-0026] gi|297175491|gb|EFH34838.1| PhnP protein [Brucella abortus bv. 5 str. B3196] gi|306275627|gb|EFM57351.1| Beta-lactamase-like protein [Brucella sp. BO1] Length = 272 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|315364798|pdb|3PY6|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Gmp gi|315583668|pdb|3PY5|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Amp gi|322812816|pdb|3QH8|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Amp From Brucella Melitensis, Long Wavelength Synchrotron Data Length = 274 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 12 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 71 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 72 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 131 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 132 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 190 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 191 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 250 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 251 ETVMRETPHHVEPGYDGLRFE 271 >gi|260459474|ref|ZP_05807729.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259035028|gb|EEW36284.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 272 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 135/269 (50%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S G PRITGDWG CDP NP+NRR R+++ + R+ G+ TTV++DT Sbjct: 1 MTDLLRLTILGCGSSPGTPRITGDWGNCDPDNPRNRRMRTAVLVERIKANGNRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V IDA +YTHPHADHIHGID LRG+ L Q+ IDV+A M L + Sbjct: 61 GPDFRQQMLLASVKRIDAAVYTHPHADHIHGIDDLRGFVLDQRHRIDVHADQPTMLRLRQ 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV+ +I++ P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPPGSSYPPIVDAHIIDHAK-PVVIEGEGGTLTLEPLPQIHGDIISLGFRIGA 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP ++E+L++LD LIIDAL+ H SH SL ++L+ IE + P++++LTHM Sbjct: 180 LAYCPDISDFPDATVERLRDLDVLIIDALQYRTHPSHLSLGQALEWIERLAPRHSVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V+ TP + PA+DGM P Sbjct: 240 HVPLDYATVMAETPDGIEPAYDGMVIEIP 268 >gi|254719075|ref|ZP_05180886.1| Beta-lactamase-like protein [Brucella sp. 83/13] gi|265984065|ref|ZP_06096800.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|306838357|ref|ZP_07471202.1| Beta-lactamase-like protein [Brucella sp. NF 2653] gi|264662657|gb|EEZ32918.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|306406497|gb|EFM62731.1| Beta-lactamase-like protein [Brucella sp. NF 2653] Length = 272 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 179/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLRYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|150396506|ref|YP_001326973.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150028021|gb|ABR60138.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 284 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 134/261 (51%), Positives = 177/261 (67%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRITGDWGACDP+NP+NRR R++L I ++ G TTV++DTGPDF Sbjct: 7 FTVLGCGSSPGVPRITGDWGACDPSNPRNRRMRAALLIEQIGPDGGKTTVVIDTGPDFRA 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAVLYTH HADH+HGID LRG+ ++ +R + ++A M + + FRYC Sbjct: 67 QMIAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRRRVPIWADAFTMARIRDGFRYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YPPIV P VI ++ P+ + AGG I P++Q HG + SLGFR G+ AYC+D Sbjct: 127 ESPPGSGYPPIVEPYVIPDDLPPLTIHGAGGPIPFEPLMQFHGNVHSLGFRIGDFAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP E+ KL LD L+ID L+ H SH SL +SL I + PK A+LTHMHV LDY Sbjct: 187 VSDFPPETAGKLTGLDLLVIDTLQYKFHPSHLSLVQSLGWINRLQPKRAVLTHMHVPLDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V TP V PA+D M+ Sbjct: 247 ETVSGETPDHVEPAYDMMRLE 267 >gi|163868326|ref|YP_001609535.1| hypothetical protein Btr_1169 [Bartonella tribocorum CIP 105476] gi|161017982|emb|CAK01540.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 269 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 141/268 (52%), Positives = 179/268 (66%), Gaps = 1/268 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP NPKN+R RSSL + R+ G TT+++DT Sbjct: 1 MFDRYRFTILGCGSSPGVPRPNGDWGACDPNNPKNKRYRSSLLVERIKPSGKKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA +KHL Sbjct: 61 GPDFRSQMIDARVSHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADKFTLKHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ D +Y PI+ +I+ D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKDSSYSPILKEHLID-EDSQFIIQGQGGAISVNTHLQHHGNIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL +LD LI++AL+ H SHFS+ ++L+ IE + PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSKLMDLDVLILEALQFKSHPSHFSVDQALQWIEYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ V+ P+ V PA G+ F + Sbjct: 240 DRSLDYNEVVNYVPAYVKPAHQGLIFET 267 >gi|15965352|ref|NP_385705.1| hypothetical protein SMc01194 [Sinorhizobium meliloti 1021] gi|307312727|ref|ZP_07592358.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] gi|307317211|ref|ZP_07596652.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gi|15074532|emb|CAC46178.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306897299|gb|EFN28044.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gi|306899452|gb|EFN30084.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] Length = 278 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 133/261 (50%), Positives = 177/261 (67%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPRITGDWGACDP+NP+NRR R++L + + + G TTV++DTGPDF Sbjct: 7 FTILGCGSSPGVPRITGDWGACDPSNPRNRRMRAALLVEQFAPDGGKTTVVIDTGPDFRA 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAVLYTH HADH+HGID LRG+ ++ +R + ++A M + + FRYC Sbjct: 67 QMIAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRRRVPIWADAFTMARIRDGFRYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YPPIV P VI ++ P+ + AGG I P++Q HG + SLGFR G AYC+D Sbjct: 127 ESPPGSGYPPIVEPYVIPDDLPPLTIHGAGGPISFEPLMQFHGNVHSLGFRIGGFAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ FP E++ KL LD L+ID L+ H SH SL +SL I + PK A+LTHMHV +DY Sbjct: 187 VSDFPVETVSKLGGLDLLVIDTLQYKFHPSHLSLVQSLVWINRLQPKRAVLTHMHVPMDY 246 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V TP V PA+D M+ Sbjct: 247 ETVCGETPDHVEPAYDMMRLE 267 >gi|110633937|ref|YP_674145.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110284921|gb|ABG62980.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 272 Score = 285 bits (730), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 136/267 (50%), Positives = 178/267 (66%), Gaps = 1/267 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S GVPRI GDWGACDP+NPKNRR R++ + R+ G T V++DT Sbjct: 1 MGDRIRLTILGCGSSPGVPRIIGDWGACDPSNPKNRRLRAAALVERIRPDGRVTRVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ + S+DAV+YTHPHADHIHGID LR Y L Q++ +D+YA ++ L + Sbjct: 61 GPDFRTQMIAAKATSLDAVVYTHPHADHIHGIDDLRSYVLAQRQLMDIYADEQTLQRLKD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ L YPPIV P +I + + GG + P+ Q HG I SLGFR GN Sbjct: 121 AFDYCFETLPGSNYPPIVVPHLIRHEQT-FTVSGEGGPLTFTPLPQIHGDIRSLGFRVGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC+DV+ FP E+L LQ L+ L++DAL+ H SH SL E+L+ I + P+ AILTHM Sbjct: 180 IAYCSDVSDFPPETLPLLQGLEILVLDALQYRPHPSHLSLGEALQWIGRLAPRRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 H LDY+ V + TP V PA+DGM Sbjct: 240 HTPLDYEAVRQETPDNVDPAYDGMTLE 266 >gi|256369419|ref|YP_003106927.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|255999579|gb|ACU47978.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] Length = 272 Score = 285 bits (730), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 138/261 (52%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP +PKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKHPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|240850629|ref|YP_002972029.1| putative PhnP protein [Bartonella grahamii as4aup] gi|240267752|gb|ACS51340.1| putative PhnP protein [Bartonella grahamii as4aup] Length = 269 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/268 (52%), Positives = 177/268 (66%), Gaps = 1/268 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG S GVPR GDWG CDP NPKN+R RSSL + R+ G TT+++DT Sbjct: 1 MCDQYRFTILGCGPSPGVPRPNGDWGTCDPNNPKNKRYRSSLLVERIKPSGDKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA ++HL Sbjct: 61 GPDFRSQMIDARVSHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADRFTLEHLKS 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +Y PI+ +I N D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKASSYSPILKEHLI-NEDSQFIIQGQGGAISVNTHLQHHGNIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL +LD LII+AL+ H SHFS+ ++L+ IE + PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSKLMDLDVLIIEALQFKSHPSHFSVDQALQWIEYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ V+ PS V PA+ G+ F + Sbjct: 240 DRSLDYNKVINYVPSYVKPAYQGLIFET 267 >gi|49474216|ref|YP_032258.1| hypothetical protein BQ06070 [Bartonella quintana str. Toulouse] gi|49239720|emb|CAF26099.1| hypothetical protein BQ06070 [Bartonella quintana str. Toulouse] Length = 270 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 140/270 (51%), Positives = 178/270 (65%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP NPKN+R RSSL + R+ G TTV++DT Sbjct: 1 MFDRYRFTILGCGSSPGVPRPNGDWGACDPNNPKNKRYRSSLLVERIQASGKKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA +KHL Sbjct: 61 GPDFRSQMIDARVNHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADAFTLKHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I N D ++ G I LQ HG I SLGFR GN Sbjct: 121 AFSYCFQTQKGSFYSPILKEHLI-NEDSQFIIQGQGDTITVKTHLQFHGTIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L+KL NL+ LII+AL+ H SH S+ ++L+ I+ + PK AILTHM Sbjct: 180 VAYCTDVSKFPEKTLQKLMNLEVLIIEALQFESHPSHLSVDQALQWIKYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DRSLDYNEVINYVPAYVKPAYQGLTFETNV 269 >gi|254714084|ref|ZP_05175895.1| Beta-lactamase-like protein [Brucella ceti M644/93/1] gi|254716860|ref|ZP_05178671.1| Beta-lactamase-like protein [Brucella ceti M13/05/1] gi|261218661|ref|ZP_05932942.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261321841|ref|ZP_05961038.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|260923750|gb|EEX90318.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261294531|gb|EEX98027.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] Length = 272 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 138/261 (52%), Positives = 179/261 (68%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTGPDF M Sbjct: 10 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRTSLLVERYDAEGNNTVVVIDTGPDFRM 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA +YTH HADHIHGID LR Y + R +DVYA L+++F YCF Sbjct: 70 QMIDSGVHMLDAAVYTHLHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNCLYDTFGYCF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTD Sbjct: 130 ETPVGSSYPPILSMHDIA-PETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTD 188 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY Sbjct: 189 VSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDY 248 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V++ TP V P +DG++F Sbjct: 249 ETVMRETPHHVEPGYDGLRFE 269 >gi|222086008|ref|YP_002544540.1| metal-dependent hydrolase protein [Agrobacterium radiobacter K84] gi|221723456|gb|ACM26612.1| metal-dependent hydrolase protein [Agrobacterium radiobacter K84] Length = 258 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 136/250 (54%), Positives = 171/250 (68%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID 77 +PRITGDWGACDP N KNRRTRS+ + +++ G TTV++DTGPDF Q++R V SI+ Sbjct: 1 MPRITGDWGACDPKNSKNRRTRSAFMVEQIAPDGGVTTVVIDTGPDFREQMIRAGVGSIE 60 Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVLYTH HADHIHG+D LRG+F I +YA M + E F YC + +YPPI Sbjct: 61 AVLYTHAHADHIHGLDDLRGFFHNSHERIPIYADQPTMDRIREGFGYCLETPPGSSYPPI 120 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK 197 V P++IE+ D ++ GG I P QQHG I SLGFR G +AYC+D++ FPAES+EK Sbjct: 121 VRPVIIESLDKSFTVEGPGGPISFWPHKQQHGDIHSLGFRIGKLAYCSDISDFPAESVEK 180 Query: 198 LQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 +QNLD LIIDAL+ H SH SL +SL IE + PK+AILTHMH LDY+ VL TP V Sbjct: 181 VQNLDILIIDALQYRPHPSHLSLEQSLAWIERLQPKHAILTHMHTPLDYETVLAETPEHV 240 Query: 258 VPAFDGMQFS 267 PA+D M+ Sbjct: 241 EPAYDQMRIE 250 >gi|319408567|emb|CBI82220.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 270 Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 140/270 (51%), Positives = 179/270 (66%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACD NPKN+R R+SL + R+ + G TTV++DT Sbjct: 1 MFDCYRFTILGCGSSPGVPRPNGYWGACDANNPKNKRYRTSLLVERIDKSGKKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+++ V +DA +YTHPHADH+HGID LR Y L QK ID+YA +K+L E Sbjct: 61 GPDFRSQMIKSHVNYLDAAVYTHPHADHVHGIDDLRSYALAQKCLIDIYANAFTLKYLNE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SF YCF+ Y PI+ +I N + ++ GG I LQ HG I+SLGFR GN Sbjct: 121 SFGYCFQTPKGSNYSPILKAHLI-NENSKFTIQGQGGAITFNTHLQFHGAINSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN FP E+L+ L +LD LIID+L+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 180 VAYCTDVNQFPVEALQNLMDLDVLIIDSLQFKPHPSHFSVDQALHWIKYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ VL P V PA+ G+ F + + Sbjct: 240 DNSLDYNDVLNYVPPNVEPAYQGLTFETNV 269 >gi|13470648|ref|NP_102217.1| hydrolase [Mesorhizobium loti MAFF303099] gi|14021390|dbj|BAB48003.1| probable hydrolase [Mesorhizobium loti MAFF303099] Length = 272 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 135/269 (50%), Positives = 177/269 (65%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S G PRITGDWG CDP NP+NRR R++ + RV+ G TTV++DT Sbjct: 1 MTGRLRLTILGCGSSPGTPRITGDWGNCDPANPRNRRMRTAALVERVAADGGRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V IDAV+YTHPHADHIHGID LRGY L+Q+ ID++A M L + Sbjct: 61 GPDFREQMLLASVKRIDAVVYTHPHADHIHGIDDLRGYVLEQRHLIDIHADQPTMLRLRQ 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV +I++ P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPPGSSYPPIVRAHIIDHAK-PVVIEGEGGALALEPLPQIHGDIISLGFRIGG 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP + ++L+ L+ L+IDAL+ H SH SL ++L IE + PK A+LTHM Sbjct: 180 LAYCPDISDFPDPTADRLRGLEMLVIDALQYNPHPSHLSLGQALGWIEKLAPKQAVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V P+ V PA+DGM P Sbjct: 240 HVPLDYAKVKGEMPANVTPAYDGMVIEIP 268 >gi|49475614|ref|YP_033655.1| hypothetical protein BH08500 [Bartonella henselae str. Houston-1] gi|49238421|emb|CAF27648.1| hypothetical protein BH08500 [Bartonella henselae str. Houston-1] Length = 269 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 138/268 (51%), Positives = 177/268 (66%), Gaps = 1/268 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGAC+P NPKN+R RSSL + R+ + G TT+++DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGDWGACNPNNPKNKRYRSSLLVERIHKSGKKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ V +DA LYTH HADHIHGID LR Y L QK ID+YA ++HL Sbjct: 61 GPDFRSQMIDACVNHLDAALYTHSHADHIHGIDDLRSYALAQKSLIDIYADSFTLRHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +Y PI+ +I N D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKGSSYLPILKAHLI-NEDSQFIIQGQGGAIHVNTHLQLHGSIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL NL+ LII+AL+ H SH S+ ++L+ I+ + PK AILTHM Sbjct: 180 VAYCTDVSQFPKKTLPKLMNLNVLIIEALQFKSHPSHLSVDQALQWIKYLQPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ V+ P V PA+ G+ F + Sbjct: 240 DRSLDYNEVINYLPPHVKPAYQGLIFEA 267 >gi|319405652|emb|CBI79275.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 270 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 138/271 (50%), Positives = 177/271 (65%), Gaps = 3/271 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACD NPKN+R R+SL + R+ + G TTVI+DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGYWGACDSNNPKNKRYRTSLLVQRIDKSGMKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ ++ ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARISHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +F YCF+ Y PI+ ++ EN++ I + GG I P LQ HG SLGFR G Sbjct: 121 AFGYCFQTQKGSHYSPILKENLIYENSEFKI--QGQGGAIVFQPHLQIHGGTHSLGFRIG 178 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 NVAYCTDV+ FP ++L L NLD LIIDAL+ H SHFS+ ++L I+ PK AILTH Sbjct: 179 NVAYCTDVSEFPEKTLSCLMNLDVLIIDALQFAPHPSHFSVDQALYWIKYFKPKRAILTH 238 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 M LDY+ V S P+ V PA+ G+ F + + Sbjct: 239 MDNSLDYNAVANSVPAHVEPAYQGLIFETNV 269 >gi|319898930|ref|YP_004159023.1| hypothetical protein BARCL_0764 [Bartonella clarridgeiae 73] gi|319402894|emb|CBI76445.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 273 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 137/270 (50%), Positives = 174/270 (64%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP N KNRR R+SL + R+ + G TTVI+DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGDWGACDPNNSKNRRYRTSLLVERIHKSGMKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARVSHLNAAIYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I+ ++ GG I LQ HG SLGFR GN Sbjct: 121 AFGYCFQTQKGSHYSPILKENLIDEKS-EFKVQGQGGAITFNTHLQIHGATRSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L L NLD LIID+L+ H SHFS+ ++L IE PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSGLMNLDVLIIDSLQFKPHPSHFSVDQALYWIEYFKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DNSLDYNNVVNYVPAHVEPAYQGLIFETDV 269 >gi|121602590|ref|YP_989107.1| metallo-beta-lactamase family protein [Bartonella bacilliformis KC583] gi|120614767|gb|ABM45368.1| metallo-beta-lactamase family protein [Bartonella bacilliformis KC583] Length = 271 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 139/267 (52%), Positives = 173/267 (64%), Gaps = 1/267 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACDP NPKN+R R+SL + R+ + G TTVI+DT Sbjct: 1 MSDCYRFTILGCGSSPGVPRPNGFWGACDPNNPKNKRYRTSLLVERIQKSGLKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L +V ++A +YTHPHADH HGI+ LR Y L QK ID+YA ++HL + Sbjct: 61 GPDFRSQMLDMRVSHLNAAIYTHPHADHTHGINDLRSYALAQKCLIDIYANAFTLEHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I+ + + GG I LQ HG I SLGFR N Sbjct: 121 AFGYCFQTPKGSCYSPILKAHLID-EESKFTISGQGGEITFNTHLQIHGTIHSLGFRICN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN FP + L L NLD LIIDAL+ H SHFS+ ++L I + PK AILTHM Sbjct: 180 VAYCTDVNQFPEKILPGLMNLDVLIIDALQFKPHPSHFSVDQALYWINYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 LDYD ++K PS V PA+ G+ F Sbjct: 240 DNSLDYDDIIKYVPSHVEPAYQGLSFE 266 >gi|218678708|ref|ZP_03526605.1| beta-lactamase domain protein [Rhizobium etli CIAT 894] Length = 236 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 126/230 (54%), Positives = 164/230 (71%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DTGPDF Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDTGPDFRE 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++R + +DAVLY+HPHADHIHGID LRGYF +R + ++A M L ++F YC Sbjct: 67 QMIRARADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLRDAFGYCL 126 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGFR G+VAYC+D Sbjct: 127 ETPPGSNYPPIVLPVVIENLDEPVEIRGPGGKIQFYPHIQQHGDIHSLGFRIGDVAYCSD 186 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 ++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AI Sbjct: 187 ISDFPPQTVDKLQNLDVLIIDALQYSYHPSHLSLEQSLDWIGRLKPKRAI 236 >gi|304391679|ref|ZP_07373621.1| phnp protein [Ahrensia sp. R2A130] gi|303295908|gb|EFL90266.1| phnp protein [Ahrensia sp. R2A130] Length = 271 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 136/266 (51%), Positives = 175/266 (65%), Gaps = 8/266 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPRI DWG CDP NPKNRR R+S+ + + G+ TTV++DTGPDF Sbjct: 10 FTILGCGSSPGVPRIADDWGNCDPKNPKNRRRRASMLVEKFGPDGT-TTVVIDTGPDFRE 68 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDVYAAPDCMKHLFESFRY 124 Q++ + DAV+YTH HADHIHGID LR + + ++R + ++A + L E F Y Sbjct: 69 QMITAGISWADAVVYTHSHADHIHGIDDLRSFVINDPKRRRVPIWADDFTSQRLHEGFGY 128 Query: 125 CFKALDDRTYPPIV--NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 CF+ + YPPI+ N IV + P + AGG IE +P Q HG I SLGFR GNVA Sbjct: 129 CFETPEGSNYPPILDENRIVAKQ---PFTISGAGGDIELLPFEQPHGNILSLGFRIGNVA 185 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YC+DV+A +L L+NLD IIDAL+ H SH SL ++L IE + P+ AILTHMH Sbjct: 186 YCSDVSALDERALPYLENLDVWIIDALQYREHPSHLSLDQTLAWIEKLKPQRAILTHMHT 245 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ VL +TP V PAFDG+QF + Sbjct: 246 PLDYETVLAATPDHVEPAFDGLQFKA 271 >gi|319407222|emb|CBI80861.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 270 Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 134/267 (50%), Positives = 173/267 (64%), Gaps = 3/267 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 Y FTILGCG+S GVPR G WGACD N KN+R R+SL + R+ + G TT I+DTGPDF Sbjct: 5 YRFTILGCGSSPGVPRPNGYWGACDSNNSKNKRYRTSLLVERIHKLGMKTTAIIDTGPDF 64 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL ++F Y Sbjct: 65 RSQMINARVSHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNKAFGY 124 Query: 125 CFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 CF+ Y PI+ ++ EN++ I + GG I LQ HG SLGFR GNVAY Sbjct: 125 CFQTPKGSHYLPILKENLICENSEFTI--QGEGGDIILKAHLQIHGATHSLGFRIGNVAY 182 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDVN FP ++L L NLD LIIDAL+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 183 CTDVNEFPEKTLSGLMNLDVLIIDALQFESHPSHFSVDQALYWIKYLKPKRAILTHMDNS 242 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 243 LDYNDVVNYVPAHVEPAYQGLTFETNV 269 >gi|319404212|emb|CBI77805.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 270 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 133/267 (49%), Positives = 172/267 (64%), Gaps = 3/267 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 Y FTILGCG+S GVPR G WGACD N KN+R R+SL + R+ + G TT I+DTGPDF Sbjct: 5 YRFTILGCGSSPGVPRPNGYWGACDSNNSKNKRYRTSLLVERIHKLGMKTTAIIDTGPDF 64 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL ++F Y Sbjct: 65 RSQMINARVSHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNKAFGY 124 Query: 125 CFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 CF+ Y PI+ ++ E ++ I + GG I LQ HG SLGFR GNVAY Sbjct: 125 CFQTPKGSHYLPILKENLICEKSEFRI--QGEGGDIILKAHLQIHGATHSLGFRIGNVAY 182 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV+ FP E+L L NLD LIIDAL+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 183 CTDVSEFPEETLSGLMNLDVLIIDALQFKPHPSHFSVDQALYWIKYLKPKRAILTHMDNS 242 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 243 LDYNDVVNYVPAHVEPAYQGLTFETNV 269 >gi|90417683|ref|ZP_01225595.1| possible hydrolase [Aurantimonas manganoxydans SI85-9A1] gi|90337355|gb|EAS51006.1| possible hydrolase [Aurantimonas manganoxydans SI85-9A1] Length = 270 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/270 (46%), Positives = 163/270 (60%), Gaps = 2/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGC +S GVPRI GDWGACDPTNPKNRR RSS I R+ G T V +D Sbjct: 1 MSDTLRLTILGCASSPGVPRINGDWGACDPTNPKNRRLRSSALIERIGPNG-RTVVAIDC 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L +V +DAV+ THPHADHIHG+D LRGY L QK I V++ + E Sbjct: 60 GPDFREQMLMVRVAHLDAVVLTHPHADHIHGMDDLRGYMLTQKSRIPVHSDHSTHARVLE 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +FRYCF+ YPP+ + I + + AGG + P Q+HG I SLG+R G Sbjct: 120 AFRYCFETPAGSAYPPVARHVEISAGEA-FSVDGAGGKLSFAPFRQEHGSIHSLGYRIGP 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC+DV+ FP ++E + +IIDAL+ H SH S+ ++L I + A LTHM Sbjct: 179 LAYCSDVSDFPDAAIEAIAGAQHIIIDALQYRTHPSHLSVEQALDWISRLGVPEATLTHM 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H+ LDYD + + P V P FDG+ P+ Sbjct: 239 HIPLDYDTLCRELPDHVRPGFDGLTLEWPL 268 >gi|114704623|ref|ZP_01437531.1| probable hydrolase [Fulvimarina pelagi HTCC2506] gi|114539408|gb|EAU42528.1| probable hydrolase [Fulvimarina pelagi HTCC2506] Length = 275 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILGC +S GVPRI+GDWG CDP NPKNRRTR++ I RVS G T V +D GPD Sbjct: 9 WLRLTILGCSSSPGVPRISGDWGNCDPANPKNRRTRTAALIERVSPTGI-TRVAIDCGPD 67 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q+L V +DA++ TH HADHIHGID +RG+ Q + I V+ D + + E+F Sbjct: 68 FRQQMLSATVDRLDAIILTHAHADHIHGIDDIRGFTQLQGKRIPVFGDVDTLARVKEAFG 127 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y FK YPP+ VI+ + GG + +P+ Q HG I+SL FRFG++AY Sbjct: 128 YIFKTPRGSFYPPVGEAQVIDAGRA-FAIDGPGGALRILPLTQNHGSITSLAFRFGSLAY 186 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV+ P E+ +LQ+LD L++ AL+ H SHFSL ++L IE + PK + LTHMH Sbjct: 187 CTDVSDIPPETEARLQDLDHLVLGALQYRTHPSHFSLDQALGWIERLAPKASTLTHMHTP 246 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V + TP V P +DG+ P+ Sbjct: 247 LDYETVQRETPDHVEPGYDGLVIEVPL 273 >gi|254469460|ref|ZP_05082865.1| lipoyltransferase, putative [Pseudovibrio sp. JE062] gi|211961295|gb|EEA96490.1| lipoyltransferase, putative [Pseudovibrio sp. JE062] Length = 272 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 128/269 (47%), Positives = 165/269 (61%), Gaps = 2/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + TILGCG+S GVPRI GDWG CDP PKNRR R +L + R SE G+ TT++VDT Sbjct: 1 MTSNFKVTILGCGSSTGVPRIGGDWGVCDPDEPKNRRRRCALLVQRFSENGT-TTIVVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L V +DAVLYTH HADH+HGID LR + L Q+ + VY K + Sbjct: 60 GPDLREQMLAAGVTHVDAVLYTHAHADHLHGIDDLRFFALMQRAKVPVYMDEFTSKRVRS 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF YPPI++ + + P+ + AGG I A+P L HG I +LGFRF + Sbjct: 120 AFDYCFVTPPGSGYPPILSENRLTDG-TPVTINGAGGPITALPFLVHHGDIDALGFRFQD 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DVN P S L+ LD IIDAL+ H SHF ++++L+ IE + P N+ILT++ Sbjct: 179 LAYTPDVNDIPESSFHALKGLDTWIIDALREKPHQSHFCVNDALEWIERMKPANSILTNL 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H DLDY + P V PAFDG P Sbjct: 239 HCDLDYQRLKSQLPENVSPAFDGRAVEFP 267 >gi|300023244|ref|YP_003755855.1| metal-dependent hydrolase [Hyphomicrobium denitrificans ATCC 51888] gi|299525065|gb|ADJ23534.1| metal-dependent hydrolase [Hyphomicrobium denitrificans ATCC 51888] Length = 265 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 125/260 (48%), Positives = 157/260 (60%), Gaps = 2/260 (0%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 Y FTILGCG+S GVPR+ +WGACDP NPKN R R S + R G T V++DT PDF Sbjct: 3 YRFTILGCGSSGGVPRVGMNWGACDPQNPKNNRLRCSALVERKGP-GGQTAVLIDTSPDF 61 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L ++ +DAVLYTH HADH HGID LR K+ IDVY L F Y Sbjct: 62 RAQILATRLTGLDAVLYTHDHADHTHGIDDLRMIAFSMKKRIDVYFDAATGASLKSRFGY 121 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF+ D Y PI+N I+ PI ++ +GG+I A PILQ HG + SLG+R GN+AY Sbjct: 122 CFETPDGSPYMPILNGHEIDGVS-PIPVRGSGGLITAQPILQSHGTMPSLGYRIGNLAYS 180 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+N P S+ LQ LD I+DAL+ H SHFS+ ++L + PK ILTHM +L Sbjct: 181 PDINDLPEASISLLQGLDVWIVDALRYTPHESHFSVKQALSWAARLKPKRTILTHMTSEL 240 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY + P V PA+DGM Sbjct: 241 DYQKLANELPEGVEPAYDGM 260 >gi|126736698|ref|ZP_01752437.1| hypothetical protein RCCS2_02795 [Roseobacter sp. CCS2] gi|126713813|gb|EBA10685.1| hypothetical protein RCCS2_02795 [Roseobacter sp. CCS2] Length = 267 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/272 (46%), Positives = 162/272 (59%), Gaps = 6/272 (2%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT-VIVD 59 M D HF ILGCG+S GVPR+ G WGACDPTNPKNRRTR SL ++R RG T V++D Sbjct: 1 MSDELHFRILGCGSSGGVPRLGGLWGACDPTNPKNRRTRCSLLVTRT--RGDQVTRVLID 58 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T PD Q+L ++ ++DAV+YTH HADH+HG+D LR + + V+A D L Sbjct: 59 TSPDMRAQLLEAEIGTLDAVVYTHSHADHVHGLDDLRMIVFNMRARLQVWADGDTSNDLL 118 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F +YPPI I+ + I + AGG I P HG I +LGFR G Sbjct: 119 GRFGYAFVQPKGSSYPPICELNAIKGD---ITIGGAGGDIVLRPFEVDHGSIEALGFRIG 175 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +VAY DV+ P + L+NLD I+DAL+ H +H L+++L I + PK AILT+ Sbjct: 176 DVAYLPDVSDIPDDVWPTLENLDIWIVDALRRDPHPTHAHLAKTLDWIAKVAPKRAILTN 235 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 MH DLDY V TP + PAFDGM S P P Sbjct: 236 MHNDLDYATVAAETPDHIAPAFDGMTISVPAP 267 >gi|312115061|ref|YP_004012657.1| metal-dependent hydrolase [Rhodomicrobium vannielii ATCC 17100] gi|311220190|gb|ADP71558.1| metal-dependent hydrolase [Rhodomicrobium vannielii ATCC 17100] Length = 266 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 123/258 (47%), Positives = 161/258 (62%), Gaps = 2/258 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ DWGAC+P NPKNRR RSSL + R+ E G T ++DT PD + Sbjct: 5 FTILGCGSSTGVPRVGNDWGACNPANPKNRRRRSSLLVERIGESG-RTVALIDTSPDMRV 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +D V+YTH HADH HGID LR Q+R ID++ + L + F YCF Sbjct: 64 QLLDADVKQLDGVVYTHDHADHTHGIDDLRMLSYLQRRRIDLWGDERTIALLRQRFDYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YP IV VIEN+ P+ + GG I P Q HG I SLGFR G +AY D Sbjct: 124 ETPPGSSYPAIVEGHVIENH-APVTIDGPGGPIVFQPFRQIHGEIDSLGFRVGGLAYSCD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N PAES L++LD I++ L+ H SH +L ++L I + PK A+LTH+H+DLDY Sbjct: 183 LNDLPAESRPILRDLDVWILNTLRYTPHPSHLTLEKALAFIAEMKPKRALLTHLHIDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGM 264 D + P+ V P+ DGM Sbjct: 243 DDLASRLPAHVEPSVDGM 260 >gi|218672197|ref|ZP_03521866.1| probable metal-dependent hydrolase protein [Rhizobium etli GR56] Length = 216 Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/211 (55%), Positives = 146/211 (69%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +VDTGPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M Sbjct: 1 VVDTGPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMD 60 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L E+FRYC + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGF Sbjct: 61 RLREAFRYCLETPPGSNYPPIVLPVVIENIDEPVEIRGPGGKIDFYPHIQQHGDIHSLGF 120 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R G+VAYC+D++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AI Sbjct: 121 RIGDVAYCSDISDFPPQTVDKLQNLDVLIIDALQYTYHPSHLSLEQSLDWISRLKPKRAI 180 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 LTHMH LDYD V+ TP VVPAFD M F Sbjct: 181 LTHMHTPLDYDAVMAETPEHVVPAFDQMSFE 211 >gi|114798446|ref|YP_760514.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] gi|114738620|gb|ABI76745.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] Length = 267 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 116/259 (44%), Positives = 158/259 (61%), Gaps = 2/259 (0%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G+S GVPR+ GDWGACDP PKNRR R + R + T +++DT PD Q+ Sbjct: 8 LLGTGSSGGVPRVGGDWGACDPAEPKNRRRRCCALVQRFGAGDALTNILIDTSPDLREQL 67 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L +V+ +DAV+YTH HAD HGID +R ++Q+R I VY P L F YCF Sbjct: 68 LEAEVMHLDAVIYTHDHADQSHGIDDVRALAIRQRRAIPVYFDPYARNSLMTRFEYCF-- 125 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + YP I++P N + AGG +E +P+ HG I G+R GNVAYC DVN Sbjct: 126 IGGKGYPAILSPHTTVNEGQAFSVTGAGGTVEFLPVSMIHGPIPCTGYRIGNVAYCNDVN 185 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 PA +L +L LD LIIDAL++ H SH L +L+ I+ + PK A+LT++HVD+DY Sbjct: 186 ELPATALRQLGGLDVLIIDALRHTPHPSHAHLELALEWIKELRPKRAVLTNLHVDMDYQT 245 Query: 249 VLKSTPSRVVPAFDGMQFS 267 + ++ P+ V P FDGM S Sbjct: 246 LRRTLPANVEPGFDGMTIS 264 >gi|182678508|ref|YP_001832654.1| metal-dependent hydrolase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634391|gb|ACB95165.1| metal-dependent hydrolase [Beijerinckia indica subsp. indica ATCC 9039] Length = 265 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/260 (45%), Positives = 160/260 (61%), Gaps = 1/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ WGACDP NPKNRR R ++ + + G T ++VD GPD Sbjct: 5 ITILGCGSSGGVPRVGQGWGACDPNNPKNRRRRCAMLLEQTGTDGGTTQILVDMGPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DA+L TH HADH HG+D +R + + ID++ + ESF Y F Sbjct: 65 QLLDHNVSHLDAILLTHQHADHTHGMDDIRPLVIMHHKRIDLHMDAATSADVRESFGYIF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPP++ I + P+ ++ AGGV++ +P +HG I +LGFRFGN AY D Sbjct: 125 ATPPGSQYPPLLTEHRIIAGE-PVDIRGAGGVLKTLPFRLEHGEIDALGFRFGNFAYSPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 VNA PAES+ L+NLD I+DAL+ H SHF L E+L I+ + PK AILT++H DLD+ Sbjct: 184 VNAIPAESVGFLENLDLWIVDALRYTPHPSHFCLQETLDWIKKLKPKRAILTNLHTDLDF 243 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P + PA+DGMQ Sbjct: 244 ERLRSELPPHIEPAYDGMQI 263 >gi|298291758|ref|YP_003693697.1| metal-dependent hydrolase [Starkeya novella DSM 506] gi|296928269|gb|ADH89078.1| metal-dependent hydrolase [Starkeya novella DSM 506] Length = 266 Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 120/264 (45%), Positives = 164/264 (62%), Gaps = 2/264 (0%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDTGPD 63 + FTILGCG+S GVPR+ WGACDP P+NRR R S+ + R + G T V++DT PD Sbjct: 3 FTFTILGCGSSGGVPRVGQGWGACDPKEPRNRRRRCSMLVERFEDGGDKPTRVLIDTSPD 62 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ +V +DAVL+TH HADH HGID LR + +R IDV+ + L F Sbjct: 63 LREQLIDAEVDRLDAVLFTHEHADHTHGIDDLRPLTIMHRRRIDVHLDAETSALLHTRFG 122 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YPPI+N + D I + G IEA Q HG I S GFR G++AY Sbjct: 123 YCFETPPGSDYPPILNEHRFQAGDT-IRVNGPAGPIEAQAFRQYHGSIISYGFRIGDLAY 181 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +D++ PAESL L++LD I+DAL+ H +HFSLSE+L IE + P+ A+LT++H D Sbjct: 182 SSDLHDLPAESLPYLEDLDVWIVDALRITPHPTHFSLSEALAWIERMKPRRAVLTNLHTD 241 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFS 267 LDYD +++ P V A+DGM+ + Sbjct: 242 LDYDRLMRDLPEGVTAAYDGMKIT 265 >gi|92117536|ref|YP_577265.1| hypothetical protein Nham_2006 [Nitrobacter hamburgensis X14] gi|91800430|gb|ABE62805.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 267 Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 119/261 (45%), Positives = 157/261 (60%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG+S GVPR WGACDP NPKNRR R SL + R SE+G+ T V++DT PD Sbjct: 5 LTVLGCGSSAGVPRPALGWGACDPKNPKNRRRRCSLMVERTSEQGT-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HGID LR L Q R I VY + + F YCF Sbjct: 64 QLIDANVDHIDAVFLTHEHADQTHGIDDLRSVVLYQHRRIPVYLNRSTAADVMQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ + YPPI+ IE + I + GG + L QHG I +LG+R GN AY D Sbjct: 124 ESPEGSFYPPILEQRAIEAGESQI-IDGKGGALTLSAFLVQHGSIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ P ES L+NLD I+D L+ H SHFS++++L I+ PK A++T+MH DLDY Sbjct: 183 LHDIPHESWPALENLDLWIVDGLRYKQHPSHFSVADALSWIDRFKPKRAVITNMHSDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + P+ VVPA+DGM+ Sbjct: 243 ETLRHELPANVVPAYDGMRLE 263 >gi|307942271|ref|ZP_07657622.1| metal-dependent hydrolase [Roseibium sp. TrichSKD4] gi|307774557|gb|EFO33767.1| metal-dependent hydrolase [Roseibium sp. TrichSKD4] Length = 266 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/262 (46%), Positives = 164/262 (62%), Gaps = 8/262 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN--TTVIVDTGPDFY 65 TILGCG+S GVPRI DWG CD PKNRR R S+ V +RG N T V++DTGPD Sbjct: 8 TILGCGSSGGVPRIGNDWGQCDSNEPKNRRLRCSIL---VEQRGPNGATQVLIDTGPDLR 64 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + +DAVLYTH HADH+HGID LR + ++ ++ + VY + E+F YC Sbjct: 65 QQMLNANIQDLDAVLYTHAHADHLHGIDDLRVFTIRNRKRMPVYMDAVTTQRAHEAFGYC 124 Query: 126 FKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK + +YPPI++ ++E C + AGG I +PI HG I +L FRF + Y Sbjct: 125 FKQPEGSSYPPILDHHMLEAGRN--CEIDGAGGTISFLPITVHHGDIDALAFRFNGIGYM 182 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV+ ++++ L +LD LIIDAL+ H SHFSL ++L IE + P A+LT+MHVD+ Sbjct: 183 PDVSDLSSDAIHSLSDLDTLIIDALRRTPHPSHFSLDDALGWIEKLRPIKAVLTNMHVDM 242 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY +L P V+PAFDGM+ Sbjct: 243 DYQSLLSELPDGVIPAFDGMKL 264 >gi|328543902|ref|YP_004304011.1| Lipoyltransferase, putative [Polymorphum gilvum SL003B-26A1] gi|326413646|gb|ADZ70709.1| Lipoyltransferase, putative [Polymorphum gilvum SL003B-26A1] Length = 268 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 116/270 (42%), Positives = 162/270 (60%), Gaps = 2/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S GVPR+ DWG CDP P+NRR R S+ + R+ G TTV+VDT Sbjct: 1 MSARLEITILGCGSSGGVPRLGNDWGDCDPAEPRNRRLRCSILVRRLGA-GGATTVLVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L V +DAVLYTH HADH+HGID LR ++ +R + VY + Sbjct: 60 GPDMRQQLLDADVEDLDAVLYTHAHADHLHGIDDLRMLAIRHRRRVPVYMDEKTSRRAHA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF +YPPI++ + + VP + AGG + +PI HG I +LGFRF + Sbjct: 120 AFGYCFATPPGSSYPPILDEVRLTAG-VPAVIDGAGGALSFLPIEVNHGEIDALGFRFED 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV+ P ++ + L I+DAL++ H SHF L+++L I + P+ A+LT+M Sbjct: 179 VAYLPDVSEIPEVAVTQFAGLRLWIVDALRHKPHPSHFCLTDALTWIADLAPRRAVLTNM 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H D+DY +++ P+ V PA DGM P+ Sbjct: 239 HNDMDYAALVRDLPAGVEPAHDGMIIELPL 268 >gi|27379625|ref|NP_771154.1| hypothetical protein bll4514 [Bradyrhizobium japonicum USDA 110] gi|27352777|dbj|BAC49779.1| bll4514 [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 116/262 (44%), Positives = 156/262 (59%), Gaps = 2/262 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDP+NPKNRR R SL + R SE G+ T +++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACDPSNPKNRRRRCSLLVERTSEHGT-TRIVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V IDAV TH HAD HG+D LR + +R I Y K + F YCF Sbjct: 64 QLLSTNVDHIDAVFLTHEHADQTHGMDDLRSVVMHMRRRIPTYFNQSTAKDILSRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 A + YPPI+ IE + + GG + L QHG I +LG+R G+ AY D Sbjct: 124 IAPEGSDYPPILTRHSIEAGESQTVL-GKGGAVTMTAFLVQHGNIPALGYRIGDAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L+NLD I+D L+ H SHFS++++L IE PK A++T+M D+DY Sbjct: 183 LNDIPRESWGALENLDLWIVDGLRYTSHVSHFSINDALSWIERFKPKRAVITNMTADVDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 +++ +S P VVPA+DG++ + Sbjct: 243 EVIRQSLPPGVVPAYDGLRLET 264 >gi|158423888|ref|YP_001525180.1| metal-dependent hydrolase [Azorhizobium caulinodans ORS 571] gi|158330777|dbj|BAF88262.1| metal-dependent hydrolase [Azorhizobium caulinodans ORS 571] Length = 264 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 125/262 (47%), Positives = 158/262 (60%), Gaps = 2/262 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ WGACDP P+NRR R SL + R G TTV+VD PD Sbjct: 5 FTILGCGSSGGVPRVGQGWGACDPNEPRNRRRRCSLLVQRTGPDGV-TTVLVDASPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DA+L TH HADH HGID +R + +R +DVY + + + F YCF Sbjct: 64 QLLDVGVTHVDALLITHEHADHTHGIDDVRPLVIHNRRRMDVYMDEETARAMHARFGYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI+ I + GG I A+P Q HG I S GFRFG VAY +D Sbjct: 124 VTPPGSNYPPILTEHRFHEGR-EITVPGQGGPITALPFRQHHGDIDSFGFRFGGVAYSSD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+AFP SL+ L+NLD I+DAL+ H SHFSLSE+L+ E + P ILT++H DLDY Sbjct: 183 VSAFPQNSLKALENLDVWILDALRETPHPSHFSLSEALEHEERMRPARTILTNLHTDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + P R++PAFDGM F + Sbjct: 243 GKLKARLPERIIPAFDGMIFEA 264 >gi|254476061|ref|ZP_05089447.1| beta-lactamase domain protein [Ruegeria sp. R11] gi|214030304|gb|EEB71139.1| beta-lactamase domain protein [Ruegeria sp. R11] Length = 265 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 121/264 (45%), Positives = 157/264 (59%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDPTNP+N R R SL + R G+ TTV++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGDCDPTNPRNLRRRCSLLVERDGPDGT-TTVLIDTTPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D V+YTH HADH+HGID LR + + VYA D L F Y F Sbjct: 65 QLLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRERVPVYADGDTQNALLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ + D P+ + GG I P HG I +LGFR G++AY D Sbjct: 125 IQPEGSPYPPILD---LRQIDGPLTISGPGGDITLRPFEVNHGSIEALGFRIGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P +L++L++LD IIDAL+ H +H L E+L+ IE + PK A+LT+MH+DLDY Sbjct: 182 VAKIPDSALDELRDLDCWIIDALRRKPHPTHLCLDEALEWIERMAPKRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 V TP V PA+DGM PI Sbjct: 242 AQVAAETPDHVDPAYDGMVIEYPI 265 >gi|294676797|ref|YP_003577412.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] gi|294475617|gb|ADE85005.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] Length = 266 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 119/269 (44%), Positives = 159/269 (59%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPRI G WG CDP NPKNRR+R SL I R+ G T V++DT Sbjct: 1 MADRLRFTILGCGSSGGVPRIGGHWGECDPANPKNRRSRCSLLIERIGAAGI-TRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+LR +V ++DAV +THPHADH+HG+D +R + V+A + L Sbjct: 60 SPDLREQLLRAEVATLDAVAFTHPHADHMHGLDDIRQITFNMHARLPVWADEPTTEALIN 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F YPPI + I P + AGG + +P +HG I +LGFR G Sbjct: 120 RFGYAFVQPAGSAYPPICDLQAITG---PFTVTGAGGPVTLVPFRVEHGNIPALGFRIGG 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV+A P ++ + LQ+LD ++DAL+ H SH L+ SL I P+ A+LT+M Sbjct: 177 LAYLPDVSAIPDDAWDCLQDLDIWVLDALRRKPHPSHAHLALSLDWIARARPREAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H+DLD+ + + TP+ V AFDGM P Sbjct: 237 HIDLDHSDLERETPAHVRAAFDGMVLELP 265 >gi|148255485|ref|YP_001240070.1| hypothetical protein BBta_4098 [Bradyrhizobium sp. BTAi1] gi|146407658|gb|ABQ36164.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 265 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 118/261 (45%), Positives = 155/261 (59%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDP NPKNRR R SL R + G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACDPNNPKNRRRRCSLLAERRAAHGV-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ QV IDAV TH HAD HGID LR + Q+R I VY K + F YCF Sbjct: 64 QLIDTQVDHIDAVFLTHEHADQTHGIDDLRSVVMHQRRRIPVYLNQSTAKDIMHRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ IE + ++ GG ++ L QHG I +LG+R GN AY D Sbjct: 124 VSPPGSDYPPILTQHAIEAGETQ-AVEGKGGELKLTAFLVQHGNIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L++LD I+D L+ H SHFS++++L IE P+ A++T+M DLDY Sbjct: 183 LNDIPEESWGALEDLDVWIVDGLRPASHPSHFSVNDALAWIERFKPRRAVITNMTADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 +++ +S P VVPA+DGM+ Sbjct: 243 EVLRQSLPDGVVPAYDGMRLE 263 >gi|163732225|ref|ZP_02139671.1| hypothetical protein RLO149_02202 [Roseobacter litoralis Och 149] gi|161394523|gb|EDQ18846.1| hypothetical protein RLO149_02202 [Roseobacter litoralis Och 149] Length = 266 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 113/265 (42%), Positives = 163/265 (61%), Gaps = 4/265 (1%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 FTILGCG+S GVPR+ G WG CDP N KNRR R SL + R+ G TTV++DT PD Sbjct: 5 QFTILGCGSSGGVPRLGGLWGDCDPNNAKNRRRRCSLLVERIGADG-KTTVLIDTSPDVR 63 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L E + +D V+YTH HADH+HGID LR + + V+A L + F Y Sbjct: 64 EQLLGENIGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARLPVWADIPTKDALMQRFSYV 123 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + YPPI++ +I+ + + + AGG + P L HG + +LGFR G+VAY Sbjct: 124 FVQPEGSNYPPILDMNIIDGD---VTIDGAGGPVTLSPFLVGHGGMDALGFRIGDVAYLP 180 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P + KL LD I+DAL+ H +H L+++L+ +E + P++A+LT+MH+DLD Sbjct: 181 DVAHIPDDVWTKLDGLDCWIVDALRRDPHPTHSHLAQTLEWVERLKPRSAVLTNMHIDLD 240 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSPI 270 Y+ V+ TP + PA+DG++ + P+ Sbjct: 241 YETVMAETPDHIQPAYDGLRLTYPV 265 >gi|75675652|ref|YP_318073.1| hypothetical protein Nwi_1460 [Nitrobacter winogradskyi Nb-255] gi|74420522|gb|ABA04721.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 267 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 158/261 (60%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDP NPKNRR R SL R SE G+ T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPAMGWGACDPANPKNRRRRCSLMAERTSEEGT-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV +H HAD HGID LR L Q R I VY + + F YCF Sbjct: 64 QLIDANVDHIDAVFLSHEHADQTHGIDDLRSVVLHQGRRIPVYLNKSTAVDVMQRFAYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + YPPI+ IE + + +GG + L +HG+I++LG+R G+ AY D Sbjct: 124 ETPEGSFYPPILEQRSIEAGESRT-INGSGGALTLSAFLVRHGQITALGYRIGDAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P ES L+NLD I+DAL+ H +HFS++++L I+ P+ A++T+MH DLDY Sbjct: 183 LCDIPPESWPALKNLDLWIVDALRYAQHPTHFSVADALSWIDRFKPRRAVITNMHSDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 +++ + P+ V PA+DGM+ + Sbjct: 243 EILRRELPTNVTPAYDGMRLT 263 >gi|149201819|ref|ZP_01878793.1| hypothetical protein RTM1035_04745 [Roseovarius sp. TM1035] gi|149144867|gb|EDM32896.1| hypothetical protein RTM1035_04745 [Roseovarius sp. TM1035] Length = 265 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/258 (45%), Positives = 156/258 (60%), Gaps = 4/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F ILGCG+S GVPR+ G WG CDPTNP+N R R SL I R +E G T V++D+ PD Sbjct: 6 FIILGCGSSGGVPRLGGHWGECDPTNPRNTRRRCSLLIERETE-GGITRVLIDSSPDLRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ++DAV+YTH HADH+HGID LR ++ + V+A D L+ F Y F Sbjct: 65 QLLDAGIGALDAVVYTHSHADHVHGIDDLRMIVFNMRKRLPVWADGDTQNALYSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 D YPPI++ + D P ++ AGG I P HG I SLGFR G++AY D Sbjct: 125 VQPADSPYPPILD---MHTIDGPFEIEGAGGAIALTPFQVNHGSIDSLGFRVGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V A P + L LD I+DAL+ H +H L+ SL+ I P+ A+LT+MH+DLDY Sbjct: 182 VAAIPEDVWPVLSGLDCWILDALRRTPHPTHAHLALSLEWIARAAPRRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGM 264 V + TP+ V PA+DGM Sbjct: 242 QTVAEETPAHVTPAYDGM 259 >gi|254464220|ref|ZP_05077631.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] gi|206685128|gb|EDZ45610.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] Length = 265 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 117/258 (45%), Positives = 155/258 (60%), Gaps = 4/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILG G+S GVPRI G WG CDP NPKNRR R S+ + R G+ T+V++DT PD Sbjct: 6 FTILGSGSSGGVPRIGGHWGDCDPQNPKNRRRRCSMLVERDGPDGT-TSVLIDTTPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +V +DAV+YTH HADH+HGID LR + ++ I VYA L F Y F Sbjct: 65 QLLDAEVSRLDAVVYTHSHADHLHGIDDLRMVYFNMRQRIPVYADGATQNDLLNRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 D+ YPPI++ I P + GG I P HG I +LGFR G +AY D Sbjct: 125 AQPDNSPYPPILDLKTIGG---PFTIHGLGGGITFRPFEVSHGSIDALGFRIGGLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+A P +L +L+ LD I+D L+ H +HFS E+L+ E + PK+ I+T+MH+D+DY Sbjct: 182 VSAIPDSALPELEGLDIWILDGLRRTPHPTHFSYQEALEWFEKMAPKHGIITNMHIDMDY 241 Query: 247 DMVLKSTPSRVVPAFDGM 264 V TP + PA+DGM Sbjct: 242 ATVEAETPDHITPAYDGM 259 >gi|89053765|ref|YP_509216.1| beta-lactamase-like [Jannaschia sp. CCS1] gi|88863314|gb|ABD54191.1| beta-lactamase-like protein [Jannaschia sp. CCS1] Length = 265 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 117/261 (44%), Positives = 153/261 (58%), Gaps = 4/261 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+N R R SL + R E G+ TTV++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGECDPANPRNARRRCSLLVEREGESGT-TTVLIDTSPDLRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + +DAVLYTH HADH+HG+D LR + + VYA L F Y F Sbjct: 65 QLLDAGIGRLDAVLYTHAHADHVHGLDDLRMIVFNMRARLPVYADGATTNDLLNRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI++ I + + + GG I P HG I +LGFR G+VAY D Sbjct: 125 VQPPGSAYPPILD---INHLGGDVTIDGEGGSITFAPFEVNHGNIDALGFRIGDVAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+A P ++ LQ LD I+DAL+ H SH L SL I+ NP+ A+LT+MH+DLDY Sbjct: 182 VSAIPEDTWPMLQGLDTWILDALRRTPHPSHSHLDNSLAWIKRANPRRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + TP V+PA+DG+ + Sbjct: 242 QTIADETPDNVIPAYDGLTLT 262 >gi|296445796|ref|ZP_06887748.1| beta-lactamase domain protein [Methylosinus trichosporium OB3b] gi|296256624|gb|EFH03699.1| beta-lactamase domain protein [Methylosinus trichosporium OB3b] Length = 264 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 115/260 (44%), Positives = 156/260 (60%), Gaps = 2/260 (0%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ WGACDP+NPKNRR R S+ +R + S T V++DT PD Q Sbjct: 6 TILGCGSSGGVPRVGQGWGACDPSNPKNRRRRCSILAARTTGE-SRTNVLIDTSPDLREQ 64 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ V +DA+L+THPHADH HG+D +RG L+ R I Y K L F Y F+ Sbjct: 65 LIDAAVDHLDAILFTHPHADHTHGVDDVRGLVLESGRRIPAYLDEPTAKMLTSRFDYIFE 124 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPP+++ I I + GGV+EA+P HG + +LGFR G +AY D+ Sbjct: 125 TPPGSFYPPLLDEHRIHLGR-EIAVDGPGGVVEAMPFRLDHGDMDALGFRIGGLAYTPDL 183 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N+ P ES L+ LD IIDAL++ H +H S+ E+L+ I P+ AILT +HVDLDY Sbjct: 184 NSVPKESFRHLEGLDVWIIDALRHKRHGTHLSVGEALEWIAHFKPRRAILTDLHVDLDYH 243 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + P V PA+DG++ Sbjct: 244 ALAAMLPEHVTPAYDGLRIE 263 >gi|99078565|ref|YP_611823.1| beta-lactamase-like [Ruegeria sp. TM1040] gi|99035703|gb|ABF62561.1| beta-lactamase-like protein [Ruegeria sp. TM1040] Length = 265 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 119/261 (45%), Positives = 155/261 (59%), Gaps = 4/261 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ G WG CDP NPKN R R S+ + + G+ TTV++DT PD Q Sbjct: 7 TILGCGSSGGVPRLGGHWGDCDPKNPKNTRRRCSMLVEQDGPDGT-TTVLIDTSPDMRSQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DAV+YTHPHADH+HGID LR + I VYA L + F Y F Sbjct: 66 LLDAGVGRLDAVVYTHPHADHVHGIDDLRMVVFNMRERIPVYADAPTKADLLDRFGYAFI 125 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YPPI+ IE + AGG I +P L +HG I +LGFR G++AY DV Sbjct: 126 QPEGSSYPPILEMRDIEGA---FTISGAGGSIPFLPFLVEHGAIDALGFRIGDLAYLPDV 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P + L+ L+ IIDAL+ H +HFS ++L I+ + P A+LT+MH+DLDYD Sbjct: 183 AKIPEPVVPVLEGLECWIIDALRRTPHPTHFSYQDALSWIDRMQPARAVLTNMHIDLDYD 242 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 V TP + PAFDGM S Sbjct: 243 TVEAETPDHITPAFDGMVIHS 263 >gi|146276606|ref|YP_001166765.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554847|gb|ABP69460.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 265 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 115/261 (44%), Positives = 158/261 (60%), Gaps = 4/261 (1%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 H TILGCG+S GVPR+ G WG CDPT+P+NRR R SL I RV+ G+ T V++DT PD + Sbjct: 5 HCTILGCGSSGGVPRLGGLWGECDPTDPRNRRRRCSLLIERVTVDGT-TRVLIDTTPDMH 63 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V +DAV +TH HADH+HGID LR ++ + V+A D + L F Y Sbjct: 64 PQLLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADADTQQALLTRFGYA 123 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + YPPI++ IE P + AGG + P HG +LGFR G +AY Sbjct: 124 FAQPEGSLYPPILDLNTIEG---PFEITGAGGTVRLEPFRVSHGPTEALGFRVGALAYLP 180 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV A P E+ +L+ L+ ++DAL+ H +H L+ +L+ I P+ AILT+MH+DLD Sbjct: 181 DVVAIPEEAWPRLEGLEMWVLDALRRKPHPTHAHLALALEWIARARPRRAILTNMHIDLD 240 Query: 246 YDMVLKSTPSRVVPAFDGMQF 266 Y + P+ VVPA+DG+ F Sbjct: 241 YATLAAELPAHVVPAYDGLTF 261 >gi|115524875|ref|YP_781786.1| putative hydrolase [Rhodopseudomonas palustris BisA53] gi|115518822|gb|ABJ06806.1| putative hydrolase [Rhodopseudomonas palustris BisA53] Length = 265 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 120/261 (45%), Positives = 148/261 (56%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGA DP NPKNRR R SL R S G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGAADPNNPKNRRLRCSLMAERTSSEGV-TRVLIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V IDAV TH HAD HGID LR + K I VY H+ F YCF Sbjct: 64 QLLSTNVEHIDAVFLTHEHADQTHGIDDLRSVVMHMKSRIPVYLNQSTAAHILLRFTYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YP I+ IE D + GG + L QHG I +LG+R G AY D Sbjct: 124 EQAPGSSYPAILESRPIEAGDSR-TIAGKGGELTLSAFLLQHGDIPALGYRIGGAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ PAES L+NLD IID L+ H+SHF++ +LK I+ PK A++T+MH DLDY Sbjct: 183 VHDIPAESWPMLENLDLWIIDGLRYKHHASHFNVEAALKWIDRFKPKRAVITNMHADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + K P+ VVP FDGM+ Sbjct: 243 ETLRKELPAGVVPGFDGMRLE 263 >gi|84516817|ref|ZP_01004175.1| hypothetical protein SKA53_06557 [Loktanella vestfoldensis SKA53] gi|84509285|gb|EAQ05744.1| hypothetical protein SKA53_06557 [Loktanella vestfoldensis SKA53] Length = 269 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 117/269 (43%), Positives = 160/269 (59%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPR+ DWG CDPT+P+N R R SL I+R + G+ T V++DT Sbjct: 1 MSDTISFTILGCGSSGGVPRLGNDWGDCDPTDPRNARRRCSLLITRQGKDGT-TRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L V ++DAV+YTH HADH+HGID LR + ++ + V+A D L Sbjct: 60 SPDMRSQLLDAGVSTVDAVVYTHAHADHVHGIDDLRMIVFQTRQRLPVWADGDTCDALLA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F YPPI + +I+ + + ++ AGG + P HG I +LGFR G Sbjct: 120 RFGYAFVQPAGSDYPPICDLNLIDGD---VTIEGAGGPVTLTPFKVAHGNIDALGFRIGA 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV+ P L LD I+DAL+ H SH L ++L I + P+ A+LT+M Sbjct: 177 VAYLPDVSDIPDAVWPALAGLDCWIVDALRRKPHPSHAHLEKTLGWITKVAPRQAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HVDLDY + TP+ V+PA+DG+ + P Sbjct: 237 HVDLDYATIAAETPAHVLPAYDGLTLTFP 265 >gi|110680633|ref|YP_683640.1| hypothetical protein RD1_3469 [Roseobacter denitrificans OCh 114] gi|109456749|gb|ABG32954.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 266 Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 115/267 (43%), Positives = 160/267 (59%), Gaps = 4/267 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D FTILGCG+S GVPR+ G WG CD N KNRR R SL + R+ G TTV++DT P Sbjct: 2 DQMEFTILGCGSSGGVPRLGGLWGDCDRHNAKNRRRRCSLLVERIGPDG-RTTVLIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L E + +D V+YTH HADH+HGID LR + + V+A L + F Sbjct: 61 DLREQLLSENIGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARLPVWADIPTKDALMQRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ I+ + + + AGG + P L HG + +LGFR G+VA Sbjct: 121 GYVFVQPEGSNYPPILDMNTIDGD---VTIDGAGGPVTLSPFLVGHGGMDALGFRIGDVA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P KL L+ I+DAL+ H +H L+++L+ IE + PK+A+LT+MH+ Sbjct: 178 YLPDVAQIPQGVWRKLNGLECWIVDALRRDPHPTHSHLAQTLEWIEQVKPKSAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 DLDY+ V+ TP V PA+DG++ + P Sbjct: 238 DLDYETVMAETPDHVQPAYDGLRLTYP 264 >gi|149914150|ref|ZP_01902681.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] gi|149811669|gb|EDM71502.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] Length = 265 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 118/263 (44%), Positives = 152/263 (57%), Gaps = 4/263 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F ILGCG+S GVPR+ G WG CDP NP+N R R SL I R G T ++DT PD Sbjct: 6 FIILGCGSSGGVPRLGGHWGDCDPENPRNTRRRCSLLIEREGP-GGITRALIDTSPDLRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAVLYTH HADH+HGID LR +R + V+A D L+ F Y F Sbjct: 65 QLLDAGVGELDAVLYTHSHADHVHGIDDLRMIVFNMRRRLPVWADGDTQNALYARFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +D YPPI++ I + + + AGG I P HG I SLGFR G++AY D Sbjct: 125 IQPEDSPYPPILDMHTISGD---VTIDGAGGPITLTPFEVNHGSIESLGFRIGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P + L+ LD I+DAL+ H +H L +SL I + P+ A+LT+MH+DLDY Sbjct: 182 VAQIPDDVWPMLEGLDCWILDALRRTPHPTHSHLEQSLDWIARVAPRRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSP 269 V TP+ V PA+DGM + P Sbjct: 242 QTVADETPAHVTPAYDGMILTYP 264 >gi|220926665|ref|YP_002501967.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219951272|gb|ACL61664.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 269 Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 158/262 (60%), Gaps = 2/262 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKI-SRVSERGSNTTVIVDTGPDFY 65 ILGCG+S GVPR+ WGACDP P+NRR R S+ + R G T V+VDT PD Sbjct: 6 LRILGCGSSGGVPRVGSGWGACDPAEPRNRRGRCSILVEGRQDHSGPATMVLVDTSPDLR 65 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V+ +DAVL+TH HADH HGID LR ++ +R I VYA L F YC Sbjct: 66 EQLLDAGVMRLDAVLFTHAHADHTHGIDDLRPLVIQMRRRIPVYADATTQALLKLRFGYC 125 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F+ YPPI++ + + +P+ + GG + A +HG +LGFRF + AY Sbjct: 126 FETAPGSQYPPILDLHELPDG-IPLSLAGPGGPVTASSFRMEHGDEEALGFRFADAAYAP 184 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+ P + L+ LD LIIDAL++ H +H+S+S++L IE + P+ AILT++H DLD Sbjct: 185 DVSTMPEAAKAHLRGLDLLIIDALRDTPHPTHYSVSDALALIEEVRPRRAILTNLHTDLD 244 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y+ + + P VVPA+DG+ + Sbjct: 245 YEALRRRLPEGVVPAYDGLTVT 266 >gi|85706304|ref|ZP_01037398.1| hypothetical protein ROS217_15455 [Roseovarius sp. 217] gi|85669077|gb|EAQ23944.1| hypothetical protein ROS217_15455 [Roseovarius sp. 217] Length = 265 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 116/258 (44%), Positives = 155/258 (60%), Gaps = 4/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+N R R S+ I R +E G T V++D+ PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGECDPANPRNTRRRCSMLIERETEDGI-TRVLIDSSPDLRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ++DAV+YTH HADH+HGID LR +R + V+A D L+ F Y F Sbjct: 65 QLLDAGIGALDAVVYTHSHADHVHGIDDLRMIVFNMRRRLPVWADGDTQNALYARFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +D YPPI++ + D P ++ AGG I P HG I +LGFR ++AY D Sbjct: 125 VQPEDSPYPPILD---MHTIDGPFEIEGAGGAIRLNPFQVNHGSIDALGFRVADLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V A P + L LD I+DAL+ H +H L+ SL I P+ A+LT+MH+DLDY Sbjct: 182 VAAIPEDVWPVLSGLDCWILDALRRTPHPTHAHLARSLDWIMRAAPRRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGM 264 V + TP+ V PA+DGM Sbjct: 242 QTVDEETPAHVTPAYDGM 259 >gi|85715529|ref|ZP_01046510.1| hypothetical protein NB311A_17529 [Nitrobacter sp. Nb-311A] gi|85697724|gb|EAQ35600.1| hypothetical protein NB311A_17529 [Nitrobacter sp. Nb-311A] Length = 267 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 154/261 (59%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDP NPKNRR R SL R S+ G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPAMGWGACDPKNPKNRRRRCSLMAERASKEGM-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV +H HAD HGID LR L Q+R I VY + + F YCF Sbjct: 64 QLIDANVDHIDAVFLSHEHADQTHGIDDLRSVVLHQRRRIPVYLNKSTAVDVMQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ IE + + +GG + L QHG+I++LG+R G+ AY D Sbjct: 124 VTPEGSYYPPILEQRSIEAGESR-TIDGSGGALTLSAFLVQHGQITALGYRIGDAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P ES L+NLD IID L+ H +HFS++++L I+ P A++T+MH DLDY Sbjct: 183 LCDIPPESWPALENLDLWIIDGLRYEQHPTHFSVADALSWIDRFKPARAVITNMHSDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 +++ P V+PA+DGM+ + Sbjct: 243 EILRHELPENVMPAYDGMRLT 263 >gi|118589863|ref|ZP_01547267.1| hypothetical protein SIAM614_14400 [Stappia aggregata IAM 12614] gi|118437360|gb|EAV43997.1| hypothetical protein SIAM614_14400 [Stappia aggregata IAM 12614] Length = 280 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 114/268 (42%), Positives = 159/268 (59%), Gaps = 10/268 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ DWG CDPT PKNRR R +L + + + TTV++D+GPD Sbjct: 5 LTILGCGSSGGVPRVGNDWGDCDPTEPKNRRGRCALLVEKRVDNKC-TTVLIDSGPDIRS 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAVLYTH HADH+HGID LR ++++ + + VY +F YCF Sbjct: 64 QLLVANVEHLDAVLYTHSHADHLHGIDDLRAFWVQSGKRVPVYMDDATAARALTAFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDV----PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + YPPI +E +D+ P+ + GG I P HG I++LGFR G+ A Sbjct: 124 ETPPGSNYPPI-----LERHDLQPGTPVTINGDGGAITFEPFEVVHGEINALGFRIGDTA 178 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV+ P SL +L++LD LI+D L+ H SHF L+E+L I P A+ T++H Sbjct: 179 YIPDVSDIPENSLNQLKDLDILILDCLRRRPHPSHFCLAEALTWTRKIAPARAVFTNLHN 238 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY ++ P + PA+DGM ++ I Sbjct: 239 DLDYHVLSAELPETIEPAYDGMILTAEI 266 >gi|323136439|ref|ZP_08071521.1| beta-lactamase domain protein [Methylocystis sp. ATCC 49242] gi|322398513|gb|EFY01033.1| beta-lactamase domain protein [Methylocystis sp. ATCC 49242] Length = 264 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 109/260 (41%), Positives = 155/260 (59%), Gaps = 2/260 (0%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ WG C+P NPKNRR R S+ +++ S S T ++VDTGPD Q Sbjct: 6 TILGCGSSGGVPRVGQGWGKCNPANPKNRRRRCSILVAKGSAE-SATQILVDTGPDLREQ 64 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ V +DA+LYTHPHADH HG+D +RG + R I Y + + F Y F+ Sbjct: 65 LIAADVKRLDAILYTHPHADHTHGVDDVRGLVIMSGRRIPAYMDEPTSRQITNKFDYIFE 124 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPP++ + P+ ++ GG ++ P HG + +LGFRFGN+AY D+ Sbjct: 125 TPPGSFYPPLLTEHRLRPGR-PVTIEGPGGEMDVTPFRLDHGDMDALGFRFGNIAYTPDL 183 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +A P+ES + L+ LD IIDAL+ H +H S+ ++L + K AILT +HVDLDYD Sbjct: 184 HAIPSESAQFLEGLDLWIIDALRYQRHGTHLSVEQALAFVAQFKAKRAILTDLHVDLDYD 243 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + P V PA+DG++ Sbjct: 244 ALAAMLPENVAPAYDGLRIE 263 >gi|254439871|ref|ZP_05053365.1| hypothetical protein OA307_4741 [Octadecabacter antarcticus 307] gi|198255317|gb|EDY79631.1| hypothetical protein OA307_4741 [Octadecabacter antarcticus 307] Length = 264 Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 111/259 (42%), Positives = 154/259 (59%), Gaps = 4/259 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVPR+ G WGACDP NPKN R R SL ++R + G T V++DT PD Q+ Sbjct: 7 ILGCGSSGGVPRLGGHWGACDPANPKNNRKRCSLLVTRTTPSGV-TRVLIDTSPDLRQQL 65 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V +DAV+YTH HADH+HG+D +R ++ + V+A D L F Y F Sbjct: 66 LDANVGELDAVIYTHAHADHVHGLDDIRMIVYNMRQRLQVWADGDTGNQLLARFGYAFVQ 125 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 YPPI + I+ + + + AGG I P +HG I +LGFR N AY DV+ Sbjct: 126 PKGSNYPPICDLNTIDGD---VTIDGAGGPITFTPFEVEHGSIDALGFRINNAAYLPDVS 182 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P + L+NLD I+DAL+ H +H L+++L+ I+L+ PK A+LT+MH+DLDY Sbjct: 183 DIPHDVWPLLENLDLWIVDALRRDPHPTHAHLAKTLEWIDLVQPKQAVLTNMHIDLDYAT 242 Query: 249 VLKSTPSRVVPAFDGMQFS 267 + T + PA+DGM + Sbjct: 243 LEAETAENIQPAYDGMTLT 261 >gi|259415181|ref|ZP_05739103.1| beta-lactamase domain protein [Silicibacter sp. TrichCH4B] gi|259349091|gb|EEW60845.1| beta-lactamase domain protein [Silicibacter sp. TrichCH4B] Length = 265 Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 115/261 (44%), Positives = 154/261 (59%), Gaps = 4/261 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ G WG CDP NPKN R R S+ + + G+ TTV++DT PD Q Sbjct: 7 TILGCGSSGGVPRLGGHWGDCDPENPKNSRRRCSMLVQQDGPEGT-TTVLIDTSPDMRSQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + +DAV+YTH HADH+HG+D LR + I VYA L + F Y F Sbjct: 66 LLDAGIGRLDAVVYTHAHADHVHGLDDLRMVVFNMRERIPVYADVPTKTDLLDRFGYAFI 125 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YPPI+ + + D + AGG I IP L HG I +LGFR G++AY DV Sbjct: 126 QPEGSSYPPILE---MRDIDGAFEISGAGGSIPFIPFLVNHGGIDALGFRIGDLAYLPDV 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P + L+ LD +ID+L+ H +HFS E+L I+ + P A+LT+MH+D+DYD Sbjct: 183 AKIPEHVVPVLEGLDCWVIDSLRRTPHPTHFSYQEALAWIDRMQPARAVLTNMHIDMDYD 242 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 V TP + PAFDGM S Sbjct: 243 TVEAETPDHITPAFDGMVIHS 263 >gi|310816872|ref|YP_003964836.1| beta-lactamase domain protein [Ketogulonicigenium vulgare Y25] gi|308755607|gb|ADO43536.1| beta-lactamase domain protein [Ketogulonicigenium vulgare Y25] Length = 268 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 114/256 (44%), Positives = 157/256 (61%), Gaps = 4/256 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVPR+ G+WG CDP PKN RTR S+ ++R +++G T V++DT PD Q+ Sbjct: 11 ILGCGSSGGVPRLGGEWGDCDPFEPKNTRTRCSILVTRETDQG-RTQVLIDTSPDMRQQL 69 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V ++D VLYTHPHADH+HGID LR + +DV+ + F Y FK Sbjct: 70 LAADVRTLDGVLYTHPHADHVHGIDDLRAISFNGDQRLDVWMDASTTAAITHRFGYIFKT 129 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + YPPI +IE P+ + AGG I P+ +HG IS+LGFRF ++AY DV+ Sbjct: 130 PEGSPYPPICVQRLIEG---PVTITGAGGPITFEPLRVEHGNISALGFRFADIAYIPDVS 186 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P + +L LD I+DAL+ H SH ++++L I+ PK A+LT+MHVDLDY Sbjct: 187 LIPEDVWPQLSGLDCWIVDALRYKPHPSHSHVAQTLGWIDRAAPKIAVLTNMHVDLDYQT 246 Query: 249 VLKSTPSRVVPAFDGM 264 + + + V PAFDGM Sbjct: 247 LGQELMAGVTPAFDGM 262 >gi|39935846|ref|NP_948122.1| putative hydrolase [Rhodopseudomonas palustris CGA009] gi|39649700|emb|CAE28221.1| possible hydrolase [Rhodopseudomonas palustris CGA009] Length = 267 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 147/261 (56%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 5 LTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPEGGITRVLIDTSPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F YCF Sbjct: 65 QLISADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNQSTGEHVLYRFAYCF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K +YP I+ IE D + AGG + L QHG I +LG+R AY D Sbjct: 125 KQAPGSSYPAILESREIEAGDSK-TIAGAGGDLTLTAFLLQHGDIPALGYRIAGAAYTPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P +S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D+DY Sbjct: 184 VHDIPEQSFPALEGLDLWIIDGLRYKHHASHFNIETALKWINRFKPKRAVITNMHADIDY 243 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + K P VVP FDGM+ Sbjct: 244 ETLRKELPDGVVPGFDGMRLE 264 >gi|89070239|ref|ZP_01157563.1| PhnP-like protein [Oceanicola granulosus HTCC2516] gi|89044159|gb|EAR50317.1| PhnP-like protein [Oceanicola granulosus HTCC2516] Length = 265 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/259 (43%), Positives = 152/259 (58%), Gaps = 4/259 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVPR+ G WGACDP NPKNRRTR SL +SR + G T ++DT PD Q+ Sbjct: 8 ILGCGSSGGVPRLGGHWGACDPANPKNRRTRCSLLVSR-EDAGGVTRTLIDTSPDMRAQL 66 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V +DAVLYTH HADH+HG+D LR + + V+A + + L F Y F A Sbjct: 67 LAADVGRLDAVLYTHAHADHVHGLDDLRQVVFNTRTRLPVHADGETSEALLNRFAYAFAA 126 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 YPPI++ + P+ + AGG I P +HG I +LGFRF ++ Y DV Sbjct: 127 PAGSQYPPILDLFDLSG---PVTVDGAGGTITFTPFPVRHGAIHALGFRFDDIVYLPDVA 183 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P +S L L I+DAL+ H +H L+ +L IE P A+LT+MH+DLDY+ Sbjct: 184 TIPDDSWPMLAGLRCWIVDALRREPHPTHSHLANTLAWIERAAPARAVLTNMHIDLDYET 243 Query: 249 VLKSTPSRVVPAFDGMQFS 267 V TP+ + PA+DG+ + Sbjct: 244 VAAETPAHIEPAYDGLTLA 262 >gi|260428138|ref|ZP_05782117.1| beta-lactamase domain protein [Citreicella sp. SE45] gi|260422630|gb|EEX15881.1| beta-lactamase domain protein [Citreicella sp. SE45] Length = 266 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 114/258 (44%), Positives = 152/258 (58%), Gaps = 3/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NPKN R R SL + R + G+ T V++DT PD Sbjct: 6 FTILGCGSSGGVPRVGGHWGDCDPENPKNTRRRCSLLVERETGEGT-TRVLIDTTPDMRQ 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ + +DAVL+TH HADH HG+D LR ++ + V+A D L F Y F Sbjct: 65 QLIDAGIGELDAVLWTHSHADHTHGLDDLRQVVFNRRARLPVWADGDTQNSLLLRFAYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ I D P+ ++ AGG I P HG I +LGFR G++AY D Sbjct: 125 VQPEGSPYPPILDMHTI--TDRPVTIEGAGGAITFEPFEVNHGSIEALGFRIGDLAYLPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P +L+ LD I+DAL+ H SH L +L+ I PK A+LT+MH+DLDY Sbjct: 183 VLHIPEAVWPRLEALDCWILDALRRSPHPSHAHLDLALEWIARARPKRAVLTNMHLDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGM 264 + V TP + PA+DGM Sbjct: 243 ETVAAETPEHITPAYDGM 260 >gi|299133886|ref|ZP_07027080.1| hydrolase [Afipia sp. 1NLS2] gi|298591722|gb|EFI51923.1| hydrolase [Afipia sp. 1NLS2] Length = 266 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 111/260 (42%), Positives = 149/260 (57%), Gaps = 2/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGAC+P NPKNRR R S + R+ G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACNPLNPKNRRRRCSAMVERIGANGI-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HG+D LR + QKR I Y + + F YCF Sbjct: 64 QLIDANVDHIDAVFLTHEHADQTHGMDDLRSVVMHQKRRIPTYLNQSTANDINQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ +YPPI+ IE + + + GG + +HG I +LG+R GN AY D Sbjct: 124 ESPPGSSYPPILERRSIEAGESEM-IDGKGGPVTLTAFWVEHGSIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L+NLD +ID L+ H SHF + E+L I+ P+ AI+T+MH DLDY Sbjct: 183 LNGIPPESFSTLENLDLWVIDGLRYTPHPSHFCVDEALAWIDRFKPRRAIITNMHADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P+ VVP +DGM+ Sbjct: 243 EELRSKLPAGVVPGYDGMRL 262 >gi|254489010|ref|ZP_05102215.1| beta-lactamase domain protein [Roseobacter sp. GAI101] gi|214045879|gb|EEB86517.1| beta-lactamase domain protein [Roseobacter sp. GAI101] Length = 266 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 110/263 (41%), Positives = 159/263 (60%), Gaps = 4/263 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT PD Sbjct: 7 ITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITKDGT-TSVLIDTSPDMRS 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAVLYTH HADH+HGID LR + ++ + V+A L + F Y F Sbjct: 66 QLLDAGVSRLDAVLYTHSHADHVHGIDDLRMIVISMRKRLQVWADAPTTAALLDRFSYVF 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ IE + + + GG + P L HG + +LGFR +VAY D Sbjct: 126 VQPEGSSYPPILDLNPIEGD---VTIDGPGGALTFTPFLVNHGGMDALGFRVNDVAYLPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P L+NL I+DAL+ H +H L+++L I+ + P+ A+LT+MH DLDY Sbjct: 183 VATIPDPVWPHLENLRCWIVDALRRDPHPTHSHLAQTLNWIKAMAPETAVLTNMHNDLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFSSP 269 + + TP + PA+DG+ + P Sbjct: 243 ETLADETPDHIQPAYDGLTLTFP 265 >gi|163853582|ref|YP_001641625.1| beta-lactamase-like protein [Methylobacterium extorquens PA1] gi|163665187|gb|ABY32554.1| beta-lactamase-like protein [Methylobacterium extorquens PA1] Length = 272 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 118/265 (44%), Positives = 156/265 (58%), Gaps = 5/265 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVDTGP 62 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TTV+VDT P Sbjct: 6 LRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGATTVLVDTSP 65 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q++ V +DA+LYTH HADH HGID +R + R I V+A P HL + F Sbjct: 66 DLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTRAHLMKRF 125 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG A Sbjct: 126 GYAFETPPGSLYPPILD-LHEMRADEPLTIAGAGGPIVADAFRMEHGNEIAHGFRFGPAA 184 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT++H Sbjct: 185 YAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTNLHT 244 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFS 267 DLDY + K P VVPA+DG+ + Sbjct: 245 DLDYATLAKKLPGHVVPAYDGLTAT 269 >gi|188583887|ref|YP_001927332.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179347385|gb|ACB82797.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 268 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILGCG+S GVPR+ WGACDP P+NRR R SL + R G TTV+VDT PD Sbjct: 6 LRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRDGGGGATTVLVDTSPDLRE 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DA+LYTH HADH HGID +R + R I V+A P L + F Y F Sbjct: 66 QLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTRTMLIKRFGYAF 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ + +V + + AGG + A +HG + GFRFG AY D Sbjct: 126 ETPPGSAYPPILDLHEMREGEV-LTIDGAGGPVAAEAFRMEHGNEIAHGFRFGPAAYAPD 184 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT++H DLDY Sbjct: 185 VSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTNLHTDLDY 244 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + P VVPA+DG+ + Sbjct: 245 ATLAGKLPPGVVPAYDGLTAT 265 >gi|221640132|ref|YP_002526394.1| PhnP-like protein [Rhodobacter sphaeroides KD131] gi|221160913|gb|ACM01893.1| PhnP-like protein [Rhodobacter sphaeroides KD131] Length = 265 Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 112/259 (43%), Positives = 150/259 (57%), Gaps = 4/259 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ G WGACDP PKNRR R SL + R++E G T V++DT PD + Q Sbjct: 7 TILGCGSSGGVPRLGGLWGACDPAEPKNRRRRCSLLVERIAE-GGTTRVLIDTSPDMHPQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DAV +TH HADH+HGID LR ++ + V+A P L F Y F Sbjct: 66 LLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADPVTQDSLLTRFGYAFA 125 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPPI++ IE P ++ AGG I P HG +LGFR +AY DV Sbjct: 126 QPAGSLYPPILDLNTIEG---PFEVEGAGGTIRLQPFQVSHGPTEALGFRVDGMAYLPDV 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 A P E+ L+ L+ ++D L+ H +H L+ +L I P+ AILT+MH+DLDY Sbjct: 183 VAIPEEAWSHLEGLEMWVLDTLRRKPHPTHAHLALALDWIARARPERAILTNMHIDLDYA 242 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + P +VPA+DG+ F Sbjct: 243 TLAAELPPHIVPAYDGLTF 261 >gi|83943048|ref|ZP_00955508.1| hypothetical protein EE36_12743 [Sulfitobacter sp. EE-36] gi|83846056|gb|EAP83933.1| hypothetical protein EE36_12743 [Sulfitobacter sp. EE-36] Length = 265 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 112/264 (42%), Positives = 159/264 (60%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT PD Sbjct: 6 ITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITDAGT-TSVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAVLYTH HADH+HG+D LR + ++ + V+A + L + F Y F Sbjct: 65 QLLDAGVGRLDAVLYTHSHADHVHGLDDLRMIVINMRQRLPVWADTPTREALLDRFGYVF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +YPPI+ + + D + + GG + P L HG + +LGFR +VAY D Sbjct: 125 IQPPGSSYPPILE---MNHIDGDVTIDGPGGTLCFTPFLVNHGGMDALGFRVNDVAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P + L+ L I+DAL+ H +H L+++L IE + P+ A+LT+MH DLDY Sbjct: 182 VAQIPDDIWPHLKGLRCWIVDALRRDPHPTHSHLAQTLDWIEQMAPQTAVLTNMHNDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D + TP + PAFDGM S P+ Sbjct: 242 DTLAAETPDHIEPAFDGMTLSFPV 265 >gi|114763014|ref|ZP_01442444.1| hypothetical protein 1100011001344_R2601_21081 [Pelagibaca bermudensis HTCC2601] gi|114544338|gb|EAU47346.1| hypothetical protein R2601_21081 [Roseovarius sp. HTCC2601] Length = 266 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 114/258 (44%), Positives = 150/258 (58%), Gaps = 3/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+N R R S+ + R +G+ T V++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGECDPANPRNTRRRCSMLVERDGAQGT-TRVLIDTTPDMRQ 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + +DAV +TH HADH HG+D LR ++ + V+A D LF F Y F Sbjct: 65 QLLDAGIGHLDAVAWTHSHADHTHGLDDLRQIVFNRRDRLPVWADGDTQNALFARFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ I D P ++ AGG I P HG I +LGFR +VAY D Sbjct: 125 VQPEGSPYPPILEMHTI--GDGPFTIEGAGGPITLTPFEVDHGSIDALGFRIADVAYLPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P S LQ LD I+DAL+ H +H L +L+ I PK A+LT+MH+DLD+ Sbjct: 183 VIRIPEASWAHLQGLDCWILDALRRTPHPTHAHLDLALEWIAKAQPKEAVLTNMHIDLDH 242 Query: 247 DMVLKSTPSRVVPAFDGM 264 D+V TP + PA+DGM Sbjct: 243 DIVAAETPDHIRPAYDGM 260 >gi|90424205|ref|YP_532575.1| putative hydrolase [Rhodopseudomonas palustris BisB18] gi|90106219|gb|ABD88256.1| putative hydrolase [Rhodopseudomonas palustris BisB18] Length = 270 Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 115/261 (44%), Positives = 148/261 (56%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDPTNP NRR R SL VS +G+ T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACDPTNPLNRRRRCSLMAELVSGQGT-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HGID LR + Q+R I VY H+ F YCF Sbjct: 64 QLIDAAVDHIDAVFLTHEHADQTHGIDDLRSVVMAQRRRIPVYLNKVTAAHILLRFTYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + YP I+ +E + + GG + L QHG I +LG+R GN AY D Sbjct: 124 EQAPESNYPAILEAHDVEAGE-SRTIDGPGGALTLTAFLVQHGSIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 VN P +S L+ LD IID L+ H SHF++ +L I PK A++T+M D+DY Sbjct: 183 VNDIPEQSWPLLEGLDLWIIDGLRFKHHGSHFNVEAALSWIARFKPKRAVITNMSADVDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 +++ P VVPA DGMQ + Sbjct: 243 EVLRGQLPPHVVPAIDGMQLT 263 >gi|254455198|ref|ZP_05068633.1| beta-lactamase domain protein [Octadecabacter antarcticus 238] gi|198263608|gb|EDY87880.1| beta-lactamase domain protein [Octadecabacter antarcticus 238] Length = 264 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/259 (42%), Positives = 154/259 (59%), Gaps = 4/259 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVPR+ G WG CDP+NPKN R R SL ++R + G T V++DT PD Q+ Sbjct: 7 ILGCGSSGGVPRLGGRWGDCDPSNPKNIRKRCSLLVTRTTPSGV-TRVLIDTSPDLRQQL 65 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V +DAV+YTH HADH+HG+D +R ++ + V+A D L F Y F Sbjct: 66 LDADVGELDAVIYTHAHADHVHGLDDIRMIVYNMRQRLQVWADGDTGNQLLARFGYAFVQ 125 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 YPPI + I+ + + + AGG I IP+ +HG I +LGFR N AY DV+ Sbjct: 126 PKGSNYPPICDLNTIDGD---VTIDGAGGPITFIPLEVEHGSIDALGFRINNAAYLPDVS 182 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P + L NLD I+DAL+ H +H L+++L+ I+ + PK A+LT+MH+DLDY Sbjct: 183 DIPDDVWPLLTNLDLWIVDALRRDPHPTHAHLAKTLEWIDRVQPKQAVLTNMHIDLDYAT 242 Query: 249 VLKSTPSRVVPAFDGMQFS 267 + T + PAFDG+ + Sbjct: 243 LAAETAPNIEPAFDGLTLT 261 >gi|254460835|ref|ZP_05074251.1| beta-lactamase domain protein [Rhodobacterales bacterium HTCC2083] gi|206677424|gb|EDZ41911.1| beta-lactamase domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 265 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 118/261 (45%), Positives = 150/261 (57%), Gaps = 4/261 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NPKN R R SL I R++E G T V++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGDCDPENPKNARRRCSLLIERIAE-GGVTRVLIDTSPDLRT 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ++DAV YTH HADH+HGID LR + + V+A L F Y F Sbjct: 65 QLLDAGIGTLDAVAYTHSHADHVHGIDDLRMIVFNMRARLPVWADGATQNDLLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI++ IE ++ AGG I P +HG I +LGFR G +AY D Sbjct: 125 VQPKGSAYPPILDLFTIEG---AFTIEGAGGPITLHPFEIEHGTIDALGFRVGPLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ E+ L+ D I+DAL+ H SH L SL+ I A+LT+MH+DLDY Sbjct: 182 VSDMTDEAWIALEGADCWILDALRRTPHPSHSHLENSLEWITKSAVPRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + VL TP + PAFDGMQ S Sbjct: 242 ETVLNETPDYITPAFDGMQIS 262 >gi|254511764|ref|ZP_05123831.1| beta-lactamase domain protein [Rhodobacteraceae bacterium KLH11] gi|221535475|gb|EEE38463.1| beta-lactamase domain protein [Rhodobacteraceae bacterium KLH11] Length = 265 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/264 (43%), Positives = 150/264 (56%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ G WGACDP +P+N R R SL + R G+ T+V++DT PD Sbjct: 6 LTILGCGSSGGVPRLGGHWGACDPDDPRNARRRCSLLVERDGPEGT-TSVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D V+YTH HADH +GID LR K + V+A D L F Y F Sbjct: 65 QLLGSGTGRLDGVVYTHSHADHTNGIDDLRMIVFNMKTRVPVWADGDTQNDLLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ I P + GG I P HG I +LGFR GN Y D Sbjct: 125 VQPEGSPYPPILDLKTIRG---PFEISGPGGAIPFRPFRVNHGAIDALGFRMGNAVYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V ES+ +L +LD LIIDAL+ H +H L ++L I+ +NPK A+LT+MH+DLDY Sbjct: 182 VAELYDESMVELADLDCLIIDALRRSPHPTHAHLEKTLGWIDQLNPKRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 V TP + PAFDGM P+ Sbjct: 242 AEVEAETPDHITPAFDGMVIRQPL 265 >gi|77464248|ref|YP_353752.1| PhnP-like protein [Rhodobacter sphaeroides 2.4.1] gi|126463090|ref|YP_001044204.1| PhnP-like protein [Rhodobacter sphaeroides ATCC 17029] gi|77388666|gb|ABA79851.1| PhnP-like protein [Rhodobacter sphaeroides 2.4.1] gi|126104754|gb|ABN77432.1| PhnP-like protein [Rhodobacter sphaeroides ATCC 17029] Length = 265 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 112/259 (43%), Positives = 150/259 (57%), Gaps = 4/259 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ G WGACDP PKNRR R SL + R++E G T V++DT PD + Q Sbjct: 7 TILGCGSSGGVPRLGGLWGACDPAEPKNRRRRCSLLVERIAE-GGTTRVLIDTSPDMHPQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DAV +TH HADH+HGID LR ++ + V+A P L F Y F Sbjct: 66 LLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADPVTQDALLTRFGYAFA 125 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPPI++ IE P ++ AGG I P HG +LGFR +AY DV Sbjct: 126 QPAGSLYPPILDLNTIEG---PFEVEGAGGTIRLQPFQVSHGPTEALGFRVDGMAYLPDV 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 A P E+ L+ L+ ++D L+ H +H L+ +L I P+ AILT+MH+DLDY Sbjct: 183 VAIPEEAWLHLEGLEMWVLDTLRRKPHPTHAHLALALDWIARARPERAILTNMHIDLDYA 242 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + P +VPA+DG+ F Sbjct: 243 TLAAELPPHIVPAYDGLTF 261 >gi|126729240|ref|ZP_01745054.1| hypothetical protein SSE37_23609 [Sagittula stellata E-37] gi|126710230|gb|EBA09282.1| hypothetical protein SSE37_23609 [Sagittula stellata E-37] Length = 266 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 119/267 (44%), Positives = 155/267 (58%), Gaps = 4/267 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R ++ G+ T V++DT Sbjct: 1 MSATLRFTILGCGSSGGVPRLGGHWGECDPANPRNRRRRCSLLVERTTDEGT-TRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L +V +DAV +TH HADH HG+D LR ++ +DV+A D L Sbjct: 60 TPDMREQLLDARVGHLDAVAWTHAHADHTHGLDDLRQIVFNTRQRLDVWADGDTQNDLIA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + YPPI+N I+ + AGG I P HG I +LGFR GN Sbjct: 120 RFGYAFIQPEGSPYPPILNLHTIDGT---FTIDGAGGAIALTPFRVNHGSIDALGFRIGN 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV P + L+NLD I+DAL+ H +H L +L+ I PK A+LT+M Sbjct: 177 LAYLPDVIRIPDDVWPHLENLDCWILDALRRTPHPTHAHLDLALEWIARAAPKRAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 H+DLD+D V TP+ V PA DGM S Sbjct: 237 HIDLDHDTVAAETPAHVTPAHDGMTIS 263 >gi|56697581|ref|YP_167950.1| hypothetical protein SPO2743 [Ruegeria pomeroyi DSS-3] gi|56679318|gb|AAV95984.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 266 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 150/264 (56%), Gaps = 4/264 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPR+ G WG CDPTNP+N R R S+ + R S+ G TTV++DT Sbjct: 1 MSDELRFTILGCGSSGGVPRLGGHWGDCDPTNPRNTRRRCSMLVERESDAGV-TTVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L +DAV+YTH HADH+HGID LR + I V+A D L Sbjct: 60 TPDMRSQLLDTGTGRLDAVVYTHSHADHVHGIDDLRMIVFNMRARIPVWADGDTQNALLS 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F D YPPI+ I P + GG I P HG I SLGFR + Sbjct: 120 RFGYAFVQPDGSPYPPILKMKTIAG---PFEVDGPGGPIAFRPFRVGHGSIDSLGFRIHD 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV + +LQ+LD ++DAL+ H +H L +SL I P+ A+LT+M Sbjct: 177 LAYLPDVAEIYDAAWAELQDLDCWVLDALRRTPHPTHAHLDKSLDWIARAAPRRAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGM 264 H+DLD+D V TP + PA+DGM Sbjct: 237 HIDLDHDTVAAETPDHITPAYDGM 260 >gi|84683870|ref|ZP_01011773.1| hypothetical protein 1099457000264_RB2654_20893 [Maritimibacter alkaliphilus HTCC2654] gi|84668613|gb|EAQ15080.1| hypothetical protein RB2654_20893 [Rhodobacterales bacterium HTCC2654] Length = 267 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 109/264 (41%), Positives = 157/264 (59%), Gaps = 2/264 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G+WGACDP NPKN R R S+ + R +E + T +++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGNWGACDPANPKNARRRCSMLVER-AEGDATTRILIDTSPDLRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V ++DAV+YTH HADH+HGID LR ++ + VYA LF F Y F Sbjct: 65 QLLDANVGALDAVIYTHAHADHVHGIDDLRMIVYNMRKRLPVYADGATQDALFSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YPPI++ I + + + AGG I P +HG I +LGFR + AY D Sbjct: 125 VQPEGSSYPPILDMHTIRDGE-DFTLTGAGGPITFTPFEVEHGNIDALGFRVADFAYLPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ + LQ+LD ++DAL+ H +H + +SL+ +E K +LT+MH+D+D+ Sbjct: 184 VSDMKDAAWNALQDLDCWVLDALRYTPHPTHAHVEKSLEWLERSGTKRGVLTNMHIDIDH 243 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + TP+ + A+DGMQ S I Sbjct: 244 STIEAETPAHITAAYDGMQISYEI 267 >gi|84499970|ref|ZP_00998236.1| hypothetical protein OB2597_08519 [Oceanicola batsensis HTCC2597] gi|84391904|gb|EAQ04172.1| hypothetical protein OB2597_08519 [Oceanicola batsensis HTCC2597] Length = 265 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 155/260 (59%), Gaps = 4/260 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WGACDP +P+N R R +L + + + G T V++DTGPD Sbjct: 6 FTILGCGSSGGVPRLGGHWGACDPADPRNTRRRCALLVEQEQDSGI-TRVLIDTGPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V ++DAV+YTH HADH+HG+D LR ++ + V+A D L + F Y F Sbjct: 65 QLLDAGVGTLDAVVYTHAHADHVHGLDDLRMIVFNMRQRLTVWADGDTQTALLDRFAYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ ++ D P + AGG + P HG I +LGFR + AY D Sbjct: 125 VQPEGSPYPPILR---MKTIDGPFVIDGAGGPVTFTPFRVNHGSIDALGFRIRDFAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V E+ E +Q+LD ++D+L+ H +H L +SL I +P+ A+LT+MH+DLDY Sbjct: 182 VADMSNEAWEAVQDLDCWVLDSLRRDPHPTHSHLEQSLDWIARADPRRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 V TP+ + PA DGMQ Sbjct: 242 ATVDGETPAHIRPAHDGMQI 261 >gi|83954237|ref|ZP_00962957.1| hypothetical protein NAS141_18064 [Sulfitobacter sp. NAS-14.1] gi|83841274|gb|EAP80444.1| hypothetical protein NAS141_18064 [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT PD Sbjct: 6 ITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITDVGT-TSVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAVLYTH HADH+HG+D LR + ++ + V+A + L + F Y F Sbjct: 65 QLLDAGVGRLDAVLYTHSHADHVHGLDDLRMIVINMRQRLPVWADTPTREALLDRFGYVF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +YPPI+ + + D + + GG + P L HG + +LGFR +VAY D Sbjct: 125 IQPPGSSYPPILE---MNHIDGDVTIDGPGGTLCFTPFLVNHGGMDALGFRVNDVAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P + L+ L I+DAL+ H +H L+++L I+ + P+ A+LT+MH DLDY Sbjct: 182 VAQIPDDIWPHLKGLRCWIVDALRRDPHPTHSHLAQTLGWIDQMAPQTAVLTNMHNDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 D + TP + PAFDGM S P+ Sbjct: 242 DTLAAETPDHIEPAFDGMTLSFPV 265 >gi|260434144|ref|ZP_05788115.1| beta-lactamase domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417972|gb|EEX11231.1| beta-lactamase domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 268 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 113/263 (42%), Positives = 155/263 (58%), Gaps = 4/263 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ G WG CDP +P+N R R S+ + R G+ T+V++DT PD Q Sbjct: 7 TILGCGSSGGVPRLGGQWGDCDPNDPRNVRRRCSMLVERDGPDGT-TSVLIDTTPDMRSQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L +D V+YTH HADH+HGID LR + V+A D L F Y F Sbjct: 66 LLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMHSRVRVWADGDTQNALLGRFGYAFI 125 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YPPI++ ++ D P + GG+I PI HG I +LGFR G++AY DV Sbjct: 126 QPEGSPYPPILD---LKTIDGPFAVDGPGGLIPFRPIKVNHGSIDALGFRIGDLAYLPDV 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +S +L++LD L+IDAL+ H +H L ++L IE ++PK A+LT+MH+DLD+ Sbjct: 183 AEIYDDSWAELEDLDCLVIDALRRSPHPTHAHLEKTLGWIEKLHPKRAVLTNMHIDLDFA 242 Query: 248 MVLKSTPSRVVPAFDGMQFSSPI 270 V TP V PAFDGM P+ Sbjct: 243 TVDAETPDNVAPAFDGMVIDQPL 265 >gi|218532444|ref|YP_002423260.1| beta-lactamase-like protein [Methylobacterium chloromethanicum CM4] gi|218524747|gb|ACK85332.1| beta-lactamase-like protein [Methylobacterium chloromethanicum CM4] Length = 272 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 117/262 (44%), Positives = 154/262 (58%), Gaps = 5/262 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVDTGP 62 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TTV+VDT P Sbjct: 6 LRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGATTVLVDTSP 65 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q++ V +DA+LYTH HADH HGID +R + R I V+A P L + F Sbjct: 66 DLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTHALLMKRF 125 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG A Sbjct: 126 GYAFETPPGSLYPPILD-LHEMRADEPLTIAGAGGPIVADAFRMEHGNEIAHGFRFGPAA 184 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT++H Sbjct: 185 YAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTNLHT 244 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 DLDY + K P VVPA+DG+ Sbjct: 245 DLDYATLAKKLPGHVVPAYDGL 266 >gi|192291494|ref|YP_001992099.1| hypothetical protein Rpal_3118 [Rhodopseudomonas palustris TIE-1] gi|192285243|gb|ACF01624.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 267 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 112/261 (42%), Positives = 146/261 (55%), Gaps = 1/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 5 LTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPDGGITRVLIDTSPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F YCF Sbjct: 65 QLICADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNQSTGEHVLYRFAYCF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K +YP I+ IE D + AGG + L HG I +LG+R AY D Sbjct: 125 KQAPGSSYPAILESREIEAGDSK-TIGGAGGDLTLTAFLLHHGDIPALGYRIAGAAYTPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P +S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D+DY Sbjct: 184 VHDIPEQSFPALEGLDLWIIDGLRYKHHASHFNIETALKWINRFKPKRAVITNMHADIDY 243 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + K P VVP +DGM+ Sbjct: 244 ETLRKELPDGVVPGYDGMRLE 264 >gi|316934059|ref|YP_004109041.1| hypothetical protein Rpdx1_2723 [Rhodopseudomonas palustris DX-1] gi|315601773|gb|ADU44308.1| hypothetical protein Rpdx1_2723 [Rhodopseudomonas palustris DX-1] Length = 267 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 112/260 (43%), Positives = 145/260 (55%), Gaps = 1/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 5 LTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPEGGITRVLIDTSPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F YCF Sbjct: 65 QLISADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNRSTGEHVLYRFAYCF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + +YP I+ IE D + AGG + L QHG I +LG+R AY D Sbjct: 125 EQAPGSSYPAILESREIEAGDSK-TIAGAGGDLTLTAFLVQHGDIPALGYRIAGAAYTPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D+DY Sbjct: 184 VHDIPEASFGALEGLDLWIIDGLRYKHHASHFNIETALKWINRFQPKRAVITNMHADIDY 243 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P VVP FDGM+ Sbjct: 244 ETLRCELPEGVVPGFDGMRL 263 >gi|254293990|ref|YP_003060013.1| beta-lactamase [Hirschia baltica ATCC 49814] gi|254042521|gb|ACT59316.1| beta-lactamase-like protein [Hirschia baltica ATCC 49814] Length = 271 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/268 (42%), Positives = 153/268 (57%), Gaps = 3/268 (1%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDT 60 K ILGCG+S GVPRI GDWG CDPT KNRR+R S+ I + S++ S T V++DT Sbjct: 4 KSKIQLRILGCGSSGGVPRINGDWGDCDPTEVKNRRSRCSVLIRKWSDKHSKPTQVLIDT 63 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L V +DAV+YTH HAD HGID LR K + V+ L Sbjct: 64 SPDMREQLLAANVKRLDAVVYTHDHADQSHGIDDLRAIAYSNKMRLPVHMDTATASTLMT 123 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F YCF YP I+ + + GG +E +P+ Q HGRI SLGFR G Sbjct: 124 RFGYCFHG--GGGYPSILEGKDSIRVGEVLNLDGPGGKLELLPLDQDHGRIRSLGFRMGP 181 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D P ++ + L +D LI+DAL+ H SH L +L+ I+ + P+ A+LT+M Sbjct: 182 IAYCNDTVGLPEDTFQALDGVDTLIVDALRYHQHPSHAHLDLALEWIDRVKPRIAVLTNM 241 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+D+DY + K P V+PA+DGM+ + Sbjct: 242 HIDMDYKTLQKELPENVMPAYDGMELEA 269 >gi|260575558|ref|ZP_05843556.1| beta-lactamase domain-containing protein [Rhodobacter sp. SW2] gi|259022201|gb|EEW25499.1| beta-lactamase domain-containing protein [Rhodobacter sp. SW2] Length = 269 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 153/262 (58%), Gaps = 4/262 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ GDWGACDPTNPKN R R SL + ++ +G+ T V++DT PD Q Sbjct: 11 TILGCGSSGGVPRLGGDWGACDPTNPKNHRRRCSLLLEQIGPQGT-TRVLIDTSPDMRAQ 69 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V ++D V+YTH HADH+HGID LR +R +DV+A L E F Y F Sbjct: 70 LLDAGVGALDGVVYTHSHADHMHGIDDLRQIVFNLRRRLDVWADAPTRAELLERFGYAFV 129 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YPPI++ +I D PI + AGG + P + HG I +LGFR G +AY D Sbjct: 130 QPEGSPYPPILDLHLI---DGPITVGGAGGDMVLQPFVADHGSIDALGFRVGGLAYLPDA 186 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ES L L ++DAL+ H +H L+ +L+ I P A++T+MH+DLD+ Sbjct: 187 VRIPEESWPLLDGLQVWVVDALRYKPHPTHAHLALTLEWIGRAKPARAVITNMHIDLDFA 246 Query: 248 MVLKSTPSRVVPAFDGMQFSSP 269 + P + PA DGM P Sbjct: 247 RLEADLPPHIRPAHDGMVIELP 268 >gi|86749800|ref|YP_486296.1| putative hydrolase [Rhodopseudomonas palustris HaA2] gi|86572828|gb|ABD07385.1| hydrolase [Rhodopseudomonas palustris HaA2] Length = 266 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 149/261 (57%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G+S GVPR WGA DP+NPKNRR R SL RV+ G T V++DT PD Sbjct: 5 LTILGSGSSAGVPRPALGWGAADPSNPKNRRRRCSLLAERVTPDGI-TRVLIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DAV TH HAD HGID LR + +R I VY +H+ F YCF Sbjct: 64 QLIDADVDHLDAVFLTHEHADQTHGIDDLRSVAMHMRRRIPVYLNQATAEHVVFRFHYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +YPPI++ IE + ++ AGG + P L QHG I +LG+R G AY D Sbjct: 124 VTPPGSSYPPILDEHRIETGES-RSIEGAGGELTLAPFLVQHGDIPALGYRIGAAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P +S L+ LD IID L+ H SHF + +L I+ PK A++T+MH D+DY Sbjct: 183 VSDIPEQSFPALEGLDLWIIDGLRYKPHGSHFHIDAALGWIDRFKPKRAVITNMHADIDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + K P VVP FDGM+ Sbjct: 243 ETLRKELPDGVVPGFDGMRLE 263 >gi|91977190|ref|YP_569849.1| putative hydrolase [Rhodopseudomonas palustris BisB5] gi|91683646|gb|ABE39948.1| putative hydrolase [Rhodopseudomonas palustris BisB5] Length = 266 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 114/260 (43%), Positives = 148/260 (56%), Gaps = 2/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G+S GVPR WGA DP+NPKNRR R SL RV+ G T V++DT PD Sbjct: 5 LTILGSGSSAGVPRPALGWGAADPSNPKNRRRRCSLLAERVTPDGI-TRVLIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +DAV TH HAD HGID LR L K+ I VY H+ F YCF Sbjct: 64 QLIDADVDHLDAVFLTHEHADQTHGIDDLRSVVLHMKQRIPVYLNKSTADHVLLRFAYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +YPPI++ IE + + AGG + L QHG I +LGFR AY D Sbjct: 124 TRAPGSSYPPILDSRSIEAGESR-SIAGAGGELTLTAFLLQHGDIPALGFRIDAAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P S +L+ LD IID L+ H+SHF++ +L+ I+ PK A++T+MH DLDY Sbjct: 183 VHDIPESSFAQLEGLDLWIIDGLRYKHHASHFNIEAALRWIDRFKPKRAVITNMHADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + + P VVP FDGM+ Sbjct: 243 ETLRRELPEGVVPGFDGMRL 262 >gi|154248309|ref|YP_001419267.1| beta-lactamase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162394|gb|ABS69610.1| beta-lactamase domain protein [Xanthobacter autotrophicus Py2] Length = 269 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 119/263 (45%), Positives = 155/263 (58%), Gaps = 22/263 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ WGACDP NP+NRR R S+ + RV G TTV+VDT PD Sbjct: 13 FTILGCGSSGGVPRVGQGWGACDPLNPRNRRRRCSMLVERVGPNG-KTTVLVDTSPDLRE 71 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ E V IDAVLYTH HADH HGID LR + + +D+YA D + L + F YCF Sbjct: 72 QLIGEGVTHIDAVLYTHEHADHTHGIDDLRPLAIHNRARVDIYADEDTSRMLHQRFGYCF 131 Query: 127 KALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 YPPI+ E ++ V++ ++GFRFG+VAY + Sbjct: 132 STPPGSAYPPILTEHRFREGREI---------VVDG-----------AVGFRFGDVAYSS 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DVN SL L NLD +IDAL+ H SHF+L E+L + L+ PK ILT++H DLD Sbjct: 172 DVNGISENSLAHLHNLDVWVIDALRETPHPSHFTLQEALDHVALMKPKRTILTNLHTDLD 231 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 Y + P +VPA+DG++F S Sbjct: 232 YAALEARLPDGIVPAYDGLKFES 254 >gi|254563516|ref|YP_003070611.1| metal-dependent hydrolase [Methylobacterium extorquens DM4] gi|254270794|emb|CAX26799.1| putative metal-dependent hydrolase [Methylobacterium extorquens DM4] Length = 276 Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 118/266 (44%), Positives = 155/266 (58%), Gaps = 9/266 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR--------VSERGSNTTVIV 58 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TTV+V Sbjct: 6 LRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGDGNGGGGTTTVLV 65 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PD Q++ V +DA+LYTH HADH HGID +R + R I V+A P HL Sbjct: 66 DTSPDLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTHAHL 125 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F Y F+ YPPI++ + D P+ + AGG I A +HG + GFRF Sbjct: 126 MKRFGYAFETPPGSLYPPILD-LHEMRADEPLTIAGAGGPIVADAFRMEHGNEIAHGFRF 184 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G AY DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT Sbjct: 185 GPAAYAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILT 244 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGM 264 ++H DLDY + K P VVPA+DG+ Sbjct: 245 NLHTDLDYATLAKKLPRHVVPAYDGL 270 >gi|209885246|ref|YP_002289103.1| hydrolase [Oligotropha carboxidovorans OM5] gi|209873442|gb|ACI93238.1| hydrolase [Oligotropha carboxidovorans OM5] Length = 271 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/260 (41%), Positives = 148/260 (56%), Gaps = 2/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILG G+S GVPR WGACDPTNPKNRR R S + R S+ G T V++DT PD Sbjct: 5 FTILGSGSSAGVPRPALGWGACDPTNPKNRRRRCSAMVERTSDTGI-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HG+D LR + Q+ I Y + + F YCF Sbjct: 64 QLIDANVGHIDAVFLTHEHADQTHGMDDLRSVVMHQRSRIPTYMNQCTANDVDQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YPPI+ +E + + GG I HG+I +LG+R GN AY D Sbjct: 124 RSPLGSDYPPILERRSVEAGESHT-IDGKGGPITLTAFWVDHGKIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L+NLD ++D L+ HSSHF + ++L I P+ A++T+MH D+DY Sbjct: 183 LNGIPPESFAALENLDLWVVDGLRYKPHSSHFCVDDALASIARFKPRRAVITNMHADIDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P+ VVP +DGM+ Sbjct: 243 EDLRHRLPAGVVPGYDGMRL 262 >gi|170747934|ref|YP_001754194.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654456|gb|ACB23511.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 267 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 115/262 (43%), Positives = 157/262 (59%), Gaps = 4/262 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILGCG+S GVPR+ WGACDP P+NRR R S+ + R S G TT++VDT PD Sbjct: 6 LRILGCGSSGGVPRVGSGWGACDPEEPRNRRRRCSILVERASGTG-RTTLLVDTSPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V +D VLYTH HADH HGID LR + + I VYA L F YCF Sbjct: 65 QLIDAGVTRLDGVLYTHAHADHTHGIDDLRPLVIAMRARIPVYADALTRSLLTARFGYCF 124 Query: 127 KALDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + YPPI++ + D+ + + +EA+P+ +HG ++LGFRFG AY Sbjct: 125 ETPPGSAYPPILDLRDLAAGRDLALEGEGGAITVEALPV--EHGNEAALGFRFGAAAYMP 182 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+ P SL +L+ LD LIIDAL++ H +HFS+S++L I + P+ A+LT++H DLD Sbjct: 183 DVSLIPEASLARLRGLDLLIIDALRDTPHPTHFSVSDALALIRAVRPRRAVLTNLHTDLD 242 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y + P +VPA+DGM S Sbjct: 243 YAALAARLPEGIVPAYDGMSLS 264 >gi|217976726|ref|YP_002360873.1| beta-lactamase domain protein [Methylocella silvestris BL2] gi|217502102|gb|ACK49511.1| beta-lactamase domain protein [Methylocella silvestris BL2] Length = 265 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 113/260 (43%), Positives = 151/260 (58%), Gaps = 1/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ WGACDP NP+NRR R S+ + + G T V+VDT PD Sbjct: 5 ITILGCGSSGGVPRVAQGWGACDPLNPRNRRRRCSIFVEQTGPDGGKTAVLVDTSPDLRE 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D VL TH HADH HGID +R + + I++Y + +F Y F Sbjct: 65 QLLDLGATRLDGVLMTHAHADHTHGIDDVRPLVISARHKINIYMDETTSAVVRSNFNYIF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPP++ + P+ + GG + A P +HG I +LGFRFG++AY D Sbjct: 125 VTPPGSQYPPLLTEHRLIPG-APVAVNGPGGPLRATPFRLEHGEIDALGFRFGDIAYSPD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N PAESL L+ LD I+DAL+ H SHFSLSE+L I + PK AILT++H DLD+ Sbjct: 184 LNGIPAESLGYLEGLDLWIVDALRYTRHPSHFSLSETLDWIARLKPKRAILTNLHTDLDF 243 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + P V PA+DGM+ Sbjct: 244 ARLAAELPPHVEPAYDGMRI 263 >gi|83949595|ref|ZP_00958328.1| hypothetical protein ISM_00835 [Roseovarius nubinhibens ISM] gi|83837494|gb|EAP76790.1| hypothetical protein ISM_00835 [Roseovarius nubinhibens ISM] Length = 269 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 113/264 (42%), Positives = 149/264 (56%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILG G+S GVPR+ G WG CDP NP+N R R SL I + G T V+VDT PD Sbjct: 10 FTILGSGSSGGVPRLGGLWGDCDPENPRNHRRRCSLLIEQEGPEGM-TRVLVDTSPDLRS 68 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAV+YTH HADH+HG+D LR + +DV+A D L F Y F Sbjct: 69 QLLDAGVGHLDAVVYTHSHADHVHGLDDLRMVVFNRGARLDVWADGDTQNALLARFGYAF 128 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI+N I+ + I + AGG I P HG I +LGFR G +AY D Sbjct: 129 VQPKGSPYPPILNLCAIDGD---IAVDGAGGTITLTPFEVAHGGIDALGFRIGALAYLPD 185 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P E+ L+ LD I+DAL+ H +H L+ SL+ + PK +LT+MHVD+DY Sbjct: 186 VSEIPEEAWPLLEGLDVWILDALRRTPHPTHAHLARSLEWMHRARPKQGVLTNMHVDMDY 245 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + P + PA+DGM + + Sbjct: 246 ATLCDELPDWIRPAYDGMVLTQKV 269 >gi|159043471|ref|YP_001532265.1| beta-lactamase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911231|gb|ABV92664.1| beta-lactamase domain protein [Dinoroseobacter shibae DFL 12] Length = 268 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 117/265 (44%), Positives = 152/265 (57%), Gaps = 4/265 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGDCDPENPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDMRA 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + +D V+YTH HADH HG+D LR + + V+A LF F Y F Sbjct: 65 QLLDAGIGRLDGVVYTHSHADHTHGLDDLRMIVFNMRARLRVWADGPTQDSLFSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ + D P+ + GG + P HG I SLGFR G++AY D Sbjct: 125 VQPEGSPYPPILE---MHTIDGPVTIDGPGGPVTLCPFKVNHGSIDSLGFRIGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V ES L LD LI+DAL+ H +H L ++L+ I P+ AILT+MH+DLDY Sbjct: 182 VAKLLPESRAALTGLDTLILDALRRTPHPTHAHLDQALEWIAEFAPRQAILTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPIP 271 V TP+ V PA+DGM P+P Sbjct: 242 ATVAAETPAHVSPAYDGMVLHRPVP 266 >gi|163746824|ref|ZP_02154181.1| beta-lactamase-like protein [Oceanibulbus indolifex HEL-45] gi|161379938|gb|EDQ04350.1| beta-lactamase-like protein [Oceanibulbus indolifex HEL-45] Length = 275 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 108/264 (40%), Positives = 157/264 (59%), Gaps = 4/264 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G+S GVPRI G WGACDPT PKN R R S+ + RV++ G+ TTV++DT PD Q Sbjct: 13 TILGSGSSGGVPRIGGHWGACDPTEPKNARRRCSILVERVTDAGT-TTVLIDTSPDMRSQ 71 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + +DAV+YTH HADH+HG+D LR + + + V+A L E F Y F Sbjct: 72 LLDAGIGRLDAVIYTHAHADHVHGLDDLRMVVMNMRARLPVWADATTRDALIERFGYAFV 131 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YPPI++ I + + GG ++ P HG I +LGFRF ++ Y DV Sbjct: 132 QPEWSSYPPILDMHDITGE---VSIDGPGGTLKFTPFTVAHGNIDALGFRFDDIVYLPDV 188 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +A P E + +L I+DAL+ H +H L+++L+ I+ + P+ A+LT++H DLDY Sbjct: 189 SAIPDECWPLMDDLRCWIVDALRRDPHPTHSHLAQTLEWIDRVQPETAVLTNLHNDLDYQ 248 Query: 248 MVLKSTPSRVVPAFDGMQFSSPIP 271 + T V PA+DG+ P+P Sbjct: 249 TLAAETADHVQPAYDGLTLHFPLP 272 >gi|240141002|ref|YP_002965482.1| putative metal-dependent hydrolase [Methylobacterium extorquens AM1] gi|240010979|gb|ACS42205.1| putative metal-dependent hydrolase [Methylobacterium extorquens AM1] Length = 272 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/262 (44%), Positives = 154/262 (58%), Gaps = 5/262 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVDTGP 62 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TTV+VDT P Sbjct: 6 LRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGTTTVLVDTSP 65 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q++ V +DA+LYTH HADH HGID +R + R I V+A P L + F Sbjct: 66 DLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTHALLMKRF 125 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG A Sbjct: 126 GYAFETPPGSLYPPILD-LHEMRADEPLTIVGAGGPIVADAFRMEHGNEIAHGFRFGPAA 184 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT++H Sbjct: 185 YAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTNLHT 244 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 DLDY + K P VVPA+DG+ Sbjct: 245 DLDYATLAKKLPGHVVPAYDGL 266 >gi|255261312|ref|ZP_05340654.1| beta-lactamase domain protein [Thalassiobium sp. R2A62] gi|255103647|gb|EET46321.1| beta-lactamase domain protein [Thalassiobium sp. R2A62] Length = 265 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 110/258 (42%), Positives = 149/258 (57%), Gaps = 4/258 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR+ G WG CDP NPKNRR R S+ + R ++ G+ T V++DT PD Sbjct: 6 LTILGCGSSGGVPRLGGHWGDCDPDNPKNRRRRCSVLVERETDAGT-TRVLIDTSPDLRN 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ++AV YTH HADH+HGID LR + + V+A L F Y F Sbjct: 65 QLLDAGIGELNAVAYTHGHADHVHGIDDLRMIVFNMRERLPVWADGATQTDLISRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +YPPI N I + + AGG I P +HG I +LGFR G+VAY D Sbjct: 125 VQPAGSSYPPICNLHSITGS---FTISGAGGDITLTPFEVEHGNIDALGFRIGDVAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P + +L+NLD I+D L+ H SH L + + I PK+A+LT+MH+DLDY Sbjct: 182 VSDIPEDVWPQLENLDTWIVDCLRRTPHPSHAHLERTFEWIARAKPKSAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGM 264 ++ T + PA+DGM Sbjct: 242 AVLEAETADHITPAYDGM 259 >gi|126726752|ref|ZP_01742592.1| beta-lactamase-like protein [Rhodobacterales bacterium HTCC2150] gi|126704081|gb|EBA03174.1| beta-lactamase-like protein [Rhodobacterales bacterium HTCC2150] Length = 265 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 111/260 (42%), Positives = 154/260 (59%), Gaps = 8/260 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WGACDPT+PKNRRTR S+ + R + T V++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGLWGACDPTDPKNRRTRCSMLVERF-DGDDVTRVLIDTSPDMRQ 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V ++D V++TH HADH HGID LR + ++ + V+A L F Y F Sbjct: 65 QLLNANVGALDGVVFTHQHADHTHGIDDLRMIVINMRQRLSVWANEATKSDLMSRFSYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDV--PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 +YPPI +E ND+ P+ + AGG I+ P HG I++LGFR ++AY Sbjct: 125 VQPVGSSYPPI-----LEMNDIEGPVVINGAGGDIKLSPFEVVHGNINALGFRIADLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV+ P + + L +L ++D L+ H SH L +SLK IE PK A+LT++H+DL Sbjct: 180 PDVSDIPPPAWDHLNDLKCWVLDCLRYTPHPSHTHLEQSLKWIERAAPKQAVLTNLHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 D+ + T + AFDGM Sbjct: 240 DHKTLTGETNENIAAAFDGM 259 >gi|167646658|ref|YP_001684321.1| hypothetical protein Caul_2696 [Caulobacter sp. K31] gi|167349088|gb|ABZ71823.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 268 Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 110/269 (40%), Positives = 151/269 (56%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVS--ERGSNTTVIV 58 M FTILG G+S GVPR G+WG CDP P+N RTR S+ + R+ + ++TTV+V Sbjct: 1 MTGRLEFTILGSGSSGGVPRADGNWGDCDPAEPRNLRTRCSMLVRRLGGGDPAADTTVVV 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PDF +Q +R V +DA L+TH HAD HGID LR +FL +R + Y + L Sbjct: 61 DTAPDFRLQAVRAGVRRLDACLFTHDHADQAHGIDDLRPFFLNARRRVPTYMDAYTTQSL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F++ YP I + I + P + G I HG I ++G+RF Sbjct: 121 GRRFDYVFQSRG--GYPAICDAHSIPPHGQPWEIDGPSGAIPVTTFDVDHGEIRAVGYRF 178 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 GNVAY D FP ES L +LD I+DAL+ H +H + +L+ I P+ AILT Sbjct: 179 GNVAYTPDAIGFPEESWAALADLDVWIVDALRWTPHPTHAHVGLALEWIARARPRRAILT 238 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ++H+DLD++ + P V PA+DGM F Sbjct: 239 NLHIDLDFNALAAKLPVGVEPAYDGMSFE 267 >gi|163743053|ref|ZP_02150436.1| hypothetical protein RG210_02267 [Phaeobacter gallaeciensis 2.10] gi|161383736|gb|EDQ08122.1| hypothetical protein RG210_02267 [Phaeobacter gallaeciensis 2.10] Length = 265 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 121/264 (45%), Positives = 157/264 (59%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGDCDPDNPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D V+YTH HADH+HGID LR + I VYA D L F Y F Sbjct: 65 QLLDSGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRDRIPVYADGDTQNALLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI++ + + D P+ + GG I P HG + +LGFR G++AY D Sbjct: 125 VQPAGSPYPPILD---LRSIDGPLTISGPGGDITLRPFEVNHGSMDALGFRIGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P +L +LQ+LD I+DAL+ H +H SL E+L+ IE + PK A+LT+MH+DLDY Sbjct: 182 VAKIPDSALVELQDLDCWILDALRRKPHPTHLSLDEALEWIERMAPKRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 V TP + PA+DGM PI Sbjct: 242 AEVAAETPDHIDPAYDGMVIEYPI 265 >gi|16126064|ref|NP_420628.1| hypothetical protein CC_1821 [Caulobacter crescentus CB15] gi|221234834|ref|YP_002517270.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] gi|13423256|gb|AAK23796.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220964006|gb|ACL95362.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] Length = 268 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 113/269 (42%), Positives = 149/269 (55%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS--NTTVIV 58 M FTILG G+S GVPR G+WG CDP++P+N R+R SL + R S G+ TTVI+ Sbjct: 1 MSGELEFTILGSGSSGGVPRADGNWGDCDPSDPRNHRSRCSLLVRRPSPAGALHETTVII 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PD +Q V +DA L+TH HAD HGID LR +FL Q+ I Y L Sbjct: 61 DTSPDLRLQTSAAGVRRMDAALFTHDHADQAHGIDDLRPFFLNQRARIPAYMDRATHDGL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F Y F + YP I P +I V ++ G I HG + ++G+R Sbjct: 121 TQRFTYIF--ISQGGYPAICEPRLIPPLGVDFAIEGPSGDIAVQTFDVDHGEVRAVGYRI 178 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G VAY D A P ES LQ+LD I+DAL+ H +H + +L+ I P+ AILT Sbjct: 179 GGVAYTPDARAIPEESWPALQDLDVWIVDALRWTPHPTHAHVDLALEWIARAKPRRAILT 238 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ++H+DLDY + P V PAFDGM+FS Sbjct: 239 NLHIDLDYQALAARLPPHVEPAFDGMRFS 267 >gi|86136158|ref|ZP_01054737.1| hypothetical protein MED193_18584 [Roseobacter sp. MED193] gi|85827032|gb|EAQ47228.1| hypothetical protein MED193_18584 [Roseobacter sp. MED193] Length = 265 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 110/264 (41%), Positives = 154/264 (58%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +TILGCG+S GVPR+ G WG CDPTNP+NRR R S+ + R G+ TTV++DT PD Sbjct: 6 YTILGCGSSGGVPRLGGHWGDCDPTNPRNRRRRCSMLVERDGPDGT-TTVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +D V+YTH HADH+HGID LR + + VYA D L F Y F Sbjct: 65 QLLDANVGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARVPVYADGDTQNALLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ + D + GG I +P HG + +LGFR GN+AY D Sbjct: 125 VQPNGSPYPPILD---LRTIDGAFTIDGPGGEIPFLPFEVNHGAMDALGFRIGNLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V ++ + L+ LD ++D+L+ H +HF+L ++L I + PK A+LT+MH+DLDY Sbjct: 182 VVEIAEDATQALEGLDCWVLDSLRRSPHPTHFNLDQALAWIARMQPKRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + T + PA+DGM P+ Sbjct: 242 ATLEAETADHITPAYDGMVIRCPL 265 >gi|126739765|ref|ZP_01755456.1| hypothetical protein RSK20926_13794 [Roseobacter sp. SK209-2-6] gi|126718997|gb|EBA15708.1| hypothetical protein RSK20926_13794 [Roseobacter sp. SK209-2-6] Length = 265 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/264 (42%), Positives = 152/264 (57%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +TILGCG+S GVPR+ G WG CDP NP+NRR R S+ + R G+ T+V++DT PD Sbjct: 6 YTILGCGSSGGVPRLGGLWGDCDPQNPRNRRRRCSMLVEREGPEGT-TSVLIDTSPDMRD 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D V+YTH HADH+HGID LR + + VYA D L F Y F Sbjct: 65 QLLDSGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARVPVYADGDTQNALLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI++ + + D + GG I P HG I +LGFR G +AY D Sbjct: 125 VQPEGSPYPPILD---LRSIDGAFAINGPGGEIPFQPFEVNHGSIDALGFRMGGLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P +L L+ LD +IDAL+ H +HF L E+L+ IE + P+ A+LT+MH DLDY Sbjct: 182 VVKIPDAALPMLEGLDCWVIDALRRNPHPTHFCLKEALEWIERMKPRRAVLTNMHFDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + TP + PA+DG+ P+ Sbjct: 242 ATLEAETPDHITPAYDGLVIRCPL 265 >gi|146340773|ref|YP_001205821.1| hypothetical protein BRADO3831 [Bradyrhizobium sp. ORS278] gi|146193579|emb|CAL77596.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 266 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 117/261 (44%), Positives = 155/261 (59%), Gaps = 2/261 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGACDP NP+NRR R SL R G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACDPNNPRNRRRRCSLLAERRGAHGV-TRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ QV IDAV TH HAD HGID LR L Q+R I VY K + F YCF Sbjct: 64 QLIDTQVDHIDAVFLTHEHADQTHGIDDLRSVVLHQRRRIPVYLNQSTAKDIMHRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YPPI+ IE + ++ GG ++ L QHG I +LG+R G+ AY D Sbjct: 124 VSPPGSDYPPILTQHSIEAGETR-AVEGKGGEMKLTAFLVQHGNIPALGYRIGDAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L++LD I+D L+ H SHFS++++L IE P+ A++T+M DLDY Sbjct: 183 LNDIPEESWGALEDLDLWIVDGLRPASHPSHFSVNDALAWIERFKPRRAVITNMTADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 +++ +S P+ VVPA+DGM+ Sbjct: 243 EVLRQSLPAGVVPAYDGMRLE 263 >gi|163738560|ref|ZP_02145974.1| hypothetical protein RGBS107_11067 [Phaeobacter gallaeciensis BS107] gi|161387888|gb|EDQ12243.1| hypothetical protein RGBS107_11067 [Phaeobacter gallaeciensis BS107] Length = 265 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 119/264 (45%), Positives = 157/264 (59%), Gaps = 4/264 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGDCDPDNPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDMRS 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +D V+YTH HADH+HGID LR + I VYA D L F Y F Sbjct: 65 QLLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRDRIPVYADGDTQNALLSRFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YPPI++ + + D P+ + GG I P HG + +LGFR G++AY D Sbjct: 125 VQPAGSPYPPILD---LRSIDGPLTISGPGGDIILRPFEVNHGSMDALGFRIGDLAYLPD 181 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V P +L +LQ+L+ I+DAL+ H +H SL E+L+ I+ + PK A+LT+MH+DLDY Sbjct: 182 VAKIPDSALAELQDLNCWILDALRRKPHPTHLSLDEALEWIDRMAPKRAVLTNMHIDLDY 241 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 V TP + PA+DGM PI Sbjct: 242 AQVAAETPDHIDPAYDGMVIEYPI 265 >gi|197105065|ref|YP_002130442.1| hypothetical protein PHZ_c1602 [Phenylobacterium zucineum HLK1] gi|196478485|gb|ACG78013.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 298 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 3/265 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR-VSERGSNTTVIVD 59 M ILGCG+S GVPR G+WG CDP NPKN RTR S+ + R ++ S T+V+VD Sbjct: 25 MSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNLRTRCSIFVRRKAADPLSETSVLVD 84 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 P+ Q R V +DAVL TH HAD +HG+D +R ++L+Q+ I + P + + Sbjct: 85 ASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDVRAFYLRQQARIPCWMDPATTRTMM 144 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F+ + YP I + + P ++ G I Q HG + S+G+RFG Sbjct: 145 RRFGYIFEG--EGGYPAICEREALPPHGTPWAVEGPSGPIPVRTFDQDHGGVRSVGYRFG 202 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 VAY +DV + E L +LD I+DAL+ H +H L +L+ I+ + P+ AILT+ Sbjct: 203 GVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTHAHLDRALEWIDRVRPRRAILTN 262 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGM 264 MH+D+D++ + + P V PA+DG+ Sbjct: 263 MHIDMDFETLRRELPEGVEPAYDGL 287 >gi|329850683|ref|ZP_08265528.1| beta-lactamase-like protein [Asticcacaulis biprosthecum C19] gi|328840998|gb|EGF90569.1| beta-lactamase-like protein [Asticcacaulis biprosthecum C19] Length = 271 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 109/258 (42%), Positives = 147/258 (56%), Gaps = 3/258 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVDTGPDFYMQ 67 ILG G S GVPRI G WGACDP NPKNRRTR S R + T+V+VDT P+F Q Sbjct: 9 ILGSGCSTGVPRIDGFWGACDPENPKNRRTRCSAWFGLRDTVTDGVTSVVVDTSPEFREQ 68 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++R V +DA+L+TH HAD HG+D +R Y + PID Y + F Y F Sbjct: 69 MVRAGVNHVDAILWTHDHADQSHGLDDMRAYTFARGGPIDGYMDEATYETFRARFDYVFT 128 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPPI +P VI + + + GG + I Q HG I S+G+R G+VAY +DV Sbjct: 129 G--KFGYPPICDPHVIMPHGLTWGVDGDGGHVPIITFDQGHGPIRSVGYRIGDVAYSSDV 186 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N P SLE L + I+DAL+ H +H L +L+ I + P+ AILT++H D+DY+ Sbjct: 187 NVMPEASLEALDGVKVWIVDALRRRTHPTHAHLDLALEWIARVKPERAILTNLHHDMDYE 246 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + P + PA+D +Q Sbjct: 247 SLKAELPDGIEPAYDQLQ 264 >gi|295689510|ref|YP_003593203.1| metal-dependent hydrolase [Caulobacter segnis ATCC 21756] gi|295431413|gb|ADG10585.1| metal-dependent hydrolase [Caulobacter segnis ATCC 21756] Length = 273 Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 110/275 (40%), Positives = 152/275 (55%), Gaps = 8/275 (2%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS--NTTVIV 58 M FTILG G+S GVPR G+WG CDP PKN R+R SL + R+ E G TTVI+ Sbjct: 1 MSASLEFTILGSGSSGGVPRADGNWGDCDPDEPKNHRSRCSLLVRRLGEGGRTHQTTVII 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PD +Q + V +DA L+TH HAD HGID LR +FL Q+ I Y L Sbjct: 61 DTSPDLRLQTVAAGVRRMDAALFTHDHADQAHGIDDLRPFFLNQRVRIPTYMDQATHDGL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIE--NNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F Y F++ YP I P+++ +D I S ++ + HG + ++G+ Sbjct: 121 LRRFEYVFRS--QGGYPAICEPLLLPPLGHDFEISGPSGDILVHTFDV--DHGEVRAVGY 176 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R G+VAY DV A P S L +L+ I+DAL+ H +H + +L+ I + PK AI Sbjct: 177 RIGDVAYTPDVRAIPESSWADLADLEVWIVDALRWTPHPTHAHVELALEWIARVKPKRAI 236 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 LT++H+DLDY + P V PA+DG++F P Sbjct: 237 LTNLHIDLDYHALAAKLPPGVEPAYDGLRFQLRAP 271 >gi|114570001|ref|YP_756681.1| beta-lactamase-like protein [Maricaulis maris MCS10] gi|114340463|gb|ABI65743.1| beta-lactamase-like protein [Maricaulis maris MCS10] Length = 284 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 105/274 (38%), Positives = 147/274 (53%), Gaps = 6/274 (2%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG------SNT 54 M T+LG G+S GVPR GDWG CDP NPKN R R S + + R + T Sbjct: 1 MTGITRLTLLGTGSSGGVPRANGDWGDCDPANPKNLRRRCSALVEQARSRDDLDAGEAVT 60 Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 V++DT PDF Q+L +V ID VL TH HAD HGID LR + +Q++ I V+ Sbjct: 61 RVVIDTSPDFREQMLSARVTRIDTVLLTHDHADQTHGIDDLRAFAYQQRQRIPVWMDTAT 120 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L E F Y F A YPPI++ + I + GG + P Q+HGRI S+ Sbjct: 121 RATLTERFGYTFAAPPGSGYPPILDQCAMPAFGSDIKIDGPGGSVVITPFDQEHGRIRSV 180 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 GF+ G +AY D+N P +S L + IDAL++ H +HF + +L+ +E + + Sbjct: 181 GFKIGEIAYSADINGLPDDSARILDGVKCWAIDALRHEPHPTHFHVEAALEALERVGAEF 240 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LT++H+ LD+D + P V FDG+Q S Sbjct: 241 GVLTNLHITLDHDQLSAKLPEGVRAGFDGLQIVS 274 >gi|170744504|ref|YP_001773159.1| beta-lactamase-like protein [Methylobacterium sp. 4-46] gi|168198778|gb|ACA20725.1| beta-lactamase-like protein [Methylobacterium sp. 4-46] Length = 269 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 113/260 (43%), Positives = 156/260 (60%), Gaps = 2/260 (0%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKI-SRVSERGSNTTVIVDTGPDFYMQ 67 ILGCG+S GVPR+ WGACDP PKNRR R SL + R + G TT++VDT PD Q Sbjct: 8 ILGCGSSGGVPRVGSGWGACDPAEPKNRRRRCSLLVEGRRAGPGPATTILVDTSPDLREQ 67 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L +DAVL+TH HADH HGID +R + +R I VYA L F YCF Sbjct: 68 LLDAAAERLDAVLFTHAHADHTHGIDDVRAMVIHMRRRIPVYADATTRALLETRFAYCFA 127 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPPI++ + + P+ + GG + A +HG +LGFRF + AY DV Sbjct: 128 TPPGSQYPPILDLHDLPDG-APLGLDGPGGPVTATSFRMEHGNEEALGFRFADAAYAPDV 186 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P + L++LD LI+DAL++ H +HFS+S++L IE + P+ AILT++H DLDY+ Sbjct: 187 SLMPEAAKAHLRDLDLLILDALRDTPHPTHFSVSDALALIEEVRPRRAILTNLHTDLDYE 246 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + + P VVPA+DG+ + Sbjct: 247 SLRRRLPKGVVPAYDGLTVT 266 >gi|114770993|ref|ZP_01448433.1| hypothetical protein OM2255_02807 [alpha proteobacterium HTCC2255] gi|114548275|gb|EAU51161.1| hypothetical protein OM2255_02807 [alpha proteobacterium HTCC2255] Length = 263 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 156/263 (59%), Gaps = 10/263 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILGCG+S GVPR+ G WG CDP N KN R R SL I R + + T V++DT PD Sbjct: 6 FTILGCGSSGGVPRLGGHWGNCDPNNVKNFRKRCSLLIQRF-DNDNVTNVLIDTTPDMRQ 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L ++ +DAV+YTH HADH+HG+D LR + ++ + V+A+ + E F Y F Sbjct: 65 QLLDAKIGKLDAVIYTHEHADHLHGLDDLRMIVINMQKRLPVFASKQTKNSILERFGYAF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVP--ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 K YPPI ++ ND+P + ++ AGG I+ HG I + +V Y Sbjct: 125 KTPKGSPYPPI-----LDMNDLPETLEIQGAGGPIKFTSFDVDHGNILVSAIKVNDVLYT 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D++ ++ +L++LD+ I+D+L+ H SH +L ++L I+ PK AILT++HVDL Sbjct: 180 PDISTVRNDT--ELRDLDYWILDSLRYKPHPSHVNLEQALGLIDRYKPKKAILTNLHVDL 237 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 DY +L TP VVPA DG+Q Sbjct: 238 DYLTLLNETPDNVVPAHDGLQIK 260 >gi|119384879|ref|YP_915935.1| beta-lactamase domain-containing protein [Paracoccus denitrificans PD1222] gi|119374646|gb|ABL70239.1| beta-lactamase domain protein [Paracoccus denitrificans PD1222] Length = 266 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 114/264 (43%), Positives = 147/264 (55%), Gaps = 8/264 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCG+S GVPR+ WG CDP NP+NRR R SL + R G+ T +++DTGPD Q Sbjct: 5 TVLGCGSSGGVPRLGNRWGECDPANPRNRRRRCSLLVERFGHDGA-TRLLIDTGPDLVPQ 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DAV YTH HADHIHGID LR +R + V+A L F Y F+ Sbjct: 64 LLDADVAELDAVAYTHAHADHIHGIDDLRQIVFNMRRRMPVWADQPTAAALKTRFGYIFE 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV----AY 183 +YPPI + I P ++ AGG IE P HG +++LGFR G V Y Sbjct: 124 TPPGSSYPPICDMQPIRG---PFAIEGAGGSIELAPFEVNHGDMNALGFRIGGVEQSLVY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P E+ + D I DAL+ H SH L+ +L+ I ++T+MHVD Sbjct: 181 LPDVLAIPEEAWSTIMGCDVFICDALRRIPHPSHAHLALTLEWIARSGCARGVITNMHVD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFS 267 LDYD V+ TP VVPA DGM+ Sbjct: 241 LDYDAVMHETPENVVPAHDGMRIE 264 >gi|154253555|ref|YP_001414379.1| beta-lactamase-like protein [Parvibaculum lavamentivorans DS-1] gi|154157505|gb|ABS64722.1| beta-lactamase-like protein [Parvibaculum lavamentivorans DS-1] Length = 272 Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 106/264 (40%), Positives = 144/264 (54%), Gaps = 4/264 (1%) Query: 8 TILGCGASLGVPRIT---GDWGACDPTNPKNRRTRSSLKISRVS-ERGSNTTVIVDTGPD 63 TILG G+S GVPRI G WGACDP PKNRR R SL I + + + T V+VDT P+ Sbjct: 6 TILGSGSSGGVPRIGAGGGFWGACDPKEPKNRRRRCSLLIEQWDRDPTAKTVVLVDTAPE 65 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ +DAVL+TH HAD HGID LR L ++R +D + L F Sbjct: 66 MRDQLIDADTGWVDAVLFTHDHADQCHGIDDLRMVALNKRRRVDCWMDAATHDTLMTRFG 125 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YP I+N +I + I + GG + A+ Q HG I SLGFRFG +AY Sbjct: 126 YCFREKPGSGYPAILNDHLISRSGQEIVIDGPGGQVRAVAFDQDHGNIRSLGFRFGPLAY 185 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D P ES + +D I+DAL+ H +H + +L ++ K+ +LT++HVD Sbjct: 186 SADAVGIPDESFALIDGIDCWIVDALRYAPHPTHAHVEMALDWLKRAGTKHGVLTNLHVD 245 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFS 267 LDY + P V P +DGM+ Sbjct: 246 LDYAKLKAELPEGVEPGYDGMRLE 269 >gi|91763266|ref|ZP_01265230.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717679|gb|EAS84330.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 259 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 107/262 (40%), Positives = 158/262 (60%), Gaps = 11/262 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F ILG G+S+GVPR G G CD N KN RTR S I + ++ +++DT PD Sbjct: 5 FIILGSGSSMGVPRADGYSGDCDLKNKKNFRTRCSALI-----KFNDQNILIDTSPDLRS 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L+ ++ SI V YTH HAD HGI+ LR +FL K+ I VYA + K+L +F+YCF Sbjct: 60 QLLKNKIKSISKVFYTHLHADQTHGINDLRPFFLINKKQIPVYADSNTKKYLLSTFKYCF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 K+ YP +N ++ +K IE+IP+ QHG+I S+ + N +AY + Sbjct: 120 KS--SFGYPSTLNIYSLKKKH-EFIIKDKKIKIESIPV--QHGKIKSICYLINNKLAYAS 174 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D++ F + +KL+NL++LIID L HS+HF+L + L+ ++++ PK ILT+MH DLD Sbjct: 175 DISLFFKKDYKKLKNLEYLIIDCLWCRNHSAHFNLDQVLEIVKILTPKKTILTNMHSDLD 234 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y + K P ++P FDG+ S Sbjct: 235 YAKLKKKLPKNIIPGFDGLTVS 256 >gi|71083694|ref|YP_266414.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062807|gb|AAZ21810.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 259 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 107/262 (40%), Positives = 158/262 (60%), Gaps = 11/262 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F ILG G+S+GVPR G G CD N KN RTR S I + ++ +++DT PD Sbjct: 5 FVILGSGSSMGVPRADGYSGDCDLKNKKNFRTRCSALI-----KFNDQNILIDTSPDLRS 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L+ ++ SI V YTH HAD HGI+ LR +FL K+ I VYA + K+L +F+YCF Sbjct: 60 QLLKNKIKSISKVFYTHLHADQTHGINDLRPFFLINKKQIPVYADINTKKYLLSTFKYCF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 K+ YP +N ++ +K IE+IP+ QHG+I S+ + N +AY + Sbjct: 120 KS--SFGYPSTLNINSLKKKH-EFIIKDKKIKIESIPV--QHGKIKSICYLINNKLAYAS 174 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D++ F + +KL+NL++LIID L HS+HF+L + L+ ++++ PK ILT+MH DLD Sbjct: 175 DISLFFKKDYKKLKNLEYLIIDCLWYRNHSAHFNLDQVLEIVKILTPKKTILTNMHSDLD 234 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y + K P ++P FDG+ S Sbjct: 235 YAKLKKKLPKNIIPGFDGLTVS 256 >gi|306840485|ref|ZP_07473244.1| Beta-lactamase-like protein [Brucella sp. BO2] gi|306289500|gb|EFM60718.1| Beta-lactamase-like protein [Brucella sp. BO2] Length = 195 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 1/192 (0%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF+ +YP Sbjct: 2 LDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYP 61 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 PI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTDV+AFP +SL Sbjct: 62 PILSMHDIAP-ETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTDVSAFPEQSL 120 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY+ V++ TP Sbjct: 121 RYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPH 180 Query: 256 RVVPAFDGMQFS 267 V P +DG++F Sbjct: 181 HVEPGYDGLRFE 192 >gi|329889611|ref|ZP_08267954.1| metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] gi|328844912|gb|EGF94476.1| metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] Length = 269 Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 144/259 (55%), Gaps = 3/259 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILGCG+S GVPR GDWG CDP+ P+NRRTR S+ R G T+V++DT PDF Sbjct: 9 IVILGCGSSGGVPRGDGDWGDCDPSEPRNRRTRCSMLARRHGPDGV-TSVVIDTSPDFRQ 67 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +V +DAVLYTH HAD HGID LR + +R I + L F Y F Sbjct: 68 QMLAAEVRHVDAVLYTHDHADQTHGIDDLRVFAAHARRRIPAWMDAATHHALTRRFDYIF 127 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YP IV + + +K GG I + Q HG I S+G+R G+VAY +D Sbjct: 128 ES--HHGYPAIVEAHRLPPHGQSWEVKGPGGPIPVMTFDQMHGPIRSVGYRLGSVAYSSD 185 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ +LE + IIDAL+ H +H + +L+ I A+LT++H+DLDY Sbjct: 186 VSDLDDAALEAVSGAQLWIIDALRYTPHPTHAHVDLALEWIARTEVSKAVLTNLHIDLDY 245 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 + +S PS V AFDG + Sbjct: 246 STLSRSLPSNVEVAFDGWR 264 >gi|83311545|ref|YP_421809.1| beta-lactamase superfamily hydrolase [Magnetospirillum magneticum AMB-1] gi|82946386|dbj|BAE51250.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Magnetospirillum magneticum AMB-1] Length = 257 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/260 (40%), Positives = 147/260 (56%), Gaps = 15/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG + GVP I+G WGACDP NP+NRR RSS+ + NT ++VDT PD Q Sbjct: 4 TILGCGGAAGVPTISGGWGACDPANPRNRRLRSSILVEE-----GNTRILVDTSPDLRDQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 L V S+DAV+YTH HADH+HGID LR ++ + V+ + F Y F+ Sbjct: 59 FLAAGVKSVDAVIYTHDHADHLHGIDDLREVNRVTRKWLPVWGDAATLATARARFPYAFE 118 Query: 128 ALDD---RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 LDD Y P++ + P + G I IP Q HG +LG RFG++AY Sbjct: 119 PLDDIGEFIYRPLLE---VREISGPFHV----GEIGVIPFDQDHGYCRTLGLRFGSIAYS 171 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV P ++ + L+ +D II L + H +H ++++L I+ + P+ A +THM L Sbjct: 172 TDVVDLPPQAFKALEGVDTWIIGCLVDYPHQTHAHIAKALDWIDCVKPRRAYITHMGSRL 231 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY+ V ++ P V+PA DG+ Sbjct: 232 DYEAVRRAVPPHVIPAHDGL 251 >gi|302383102|ref|YP_003818925.1| hypothetical protein Bresu_1991 [Brevundimonas subvibrioides ATCC 15264] gi|302193730|gb|ADL01302.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 266 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 98/259 (37%), Positives = 147/259 (56%), Gaps = 3/259 (1%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 FTILGCG+S GVPR GDWG+CDP PKNRRTR S+ R G T+V++DT PD Sbjct: 5 EFTILGCGSSGGVPRGDGDWGSCDPAEPKNRRTRCSMLARRRGPEG-ETSVLIDTSPDLR 63 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L +DAVL TH HAD HGID LR + L++++ I + L F Y Sbjct: 64 QQMLAAGATRVDAVLITHDHADQTHGIDDLRVFALRRRQRIPAWMDAATKAALTHRFDYI 123 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F+ + YP I+ + + V + GG + + Q HG I S+G+R G ++Y + Sbjct: 124 FEM--KQGYPAILEAQDLPAHGVDWQIDGPGGAVPVVTFDQGHGPIRSVGYRLGGLSYSS 181 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+A ++L ++ + I+DAL+ H +H + ++L+ I + AILT++H+DLD Sbjct: 182 DVDALDEDALRAVRGSEVWIVDALRWTRHPTHAHVDQALEWIAAADVGKAILTNLHIDLD 241 Query: 246 YDMVLKSTPSRVVPAFDGM 264 ++ + + P+ V A DG Sbjct: 242 FNALRRFVPANVEIAIDGW 260 >gi|254456108|ref|ZP_05069537.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083110|gb|EDZ60536.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] Length = 258 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 103/264 (39%), Positives = 153/264 (57%), Gaps = 12/264 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F ILGCG+S+GVPR G +G CDP KN RTR S I E V++DT PD Sbjct: 3 FIILGCGSSMGVPRPDGFFGNCDPNEKKNYRTRCSALIKTEKE-----NVLIDTSPDLRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LR ++ I+ V Y+H HAD HGI+ LR ++L K+PI+V+A ++L ++F +CF Sbjct: 58 QLLRHKIKKINKVFYSHMHADQTHGINDLRSFYLSNKKPIEVFADKSTSQYLKDNFSFCF 117 Query: 127 KALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVAY 183 K+ + YP +N I +NN + + S+ IE PI HG ++S+ + +AY Sbjct: 118 KSY-SKEYPATLKLNKINTKNN---LFVNSSIKKIEVKPISVIHGNVNSICYIINRELAY 173 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +DV+ + L+ +NL +LI+D L H SH +L +SL I + PK AILT++ Sbjct: 174 ISDVSEILKKDLKYFKNLKYLIVDCLWYNFHPSHLNLEKSLNLINYLKPKKAILTNLSPV 233 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFS 267 LDY ++ K P V+PA DG+ + Sbjct: 234 LDYKVLKKLVPKNVIPAHDGLTLN 257 >gi|254468952|ref|ZP_05082358.1| PhnP protein [beta proteobacterium KB13] gi|207087762|gb|EDZ65045.1| PhnP protein [beta proteobacterium KB13] Length = 255 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/260 (40%), Positives = 142/260 (54%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G+S G P I C NPKN+R+R S I+ T +++DT PDF MQ Sbjct: 4 TVLGAGSSAGTPVIGCQCAVCHSDNPKNKRSRCSSLITM----DDGTNILIDTSPDFKMQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +RE + IDAVLYTH HADH HG+D LR Y K K+ I ++A + M L F+Y + Sbjct: 60 AMRESIDKIDAVLYTHHHADHCHGMDDLRAYCQKYKKAIPIFANQNTMSELKLKFQYAIR 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P+++ ++ N I G E IP+ HGR+ LG+R G AY TDV Sbjct: 120 EETKFWETPVLHAQIV-NQLFNI------GSHEVIPLPVIHGRMEILGYRIGRFAYITDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P +LE LQ +D L++D L+ H SH+ +SL E INPK L HM D++YD Sbjct: 173 SEIPDSTLELLQGIDTLMLDCLRFEPHFSHYGFKQSLAMAEKINPKRTFLIHMTHDIEYD 232 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 V S P V A+DG++ Sbjct: 233 AVSDSLPEHVFLAYDGLKLQ 252 >gi|148553412|ref|YP_001260994.1| beta-lactamase domain-containing protein [Sphingomonas wittichii RW1] gi|148498602|gb|ABQ66856.1| beta-lactamase domain protein [Sphingomonas wittichii RW1] Length = 254 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/263 (39%), Positives = 145/263 (55%), Gaps = 18/263 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LGCG S GVPRI DWG CDP P+NRR+R+S+ + + R ++VDT PD Sbjct: 3 LRVLGCGTSSGVPRIGNDWGDCDPAEPRNRRSRASILVESATTR-----LLVDTTPDMRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V++IDA+L+TH HADH HGID +R + ++ P+ YA + M+ L F Y F Sbjct: 58 QLLDADVIAIDAILWTHDHADHCHGIDDVRQIYHARRAPVPGYAYAEAMQQLRRRFDYVF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 D YPP V P V+E D+ I G I + Q HG I S G RF ++ Sbjct: 118 TGRD--GYPPTVEPGVLE-PDMTI------GDIRIRCVAQPHGSIFSAGLRFDHDGKSIG 168 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + F E + +D ++DAL+ H +H L+ +L I P A+LTHM Sbjct: 169 YSTDFHVFTDEMIGLFSGVDIWVVDALRARPHPTHAHLAMTLDAIRTCAPGRALLTHMDQ 228 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 +DY + +S P V PA+DG++ Sbjct: 229 SMDYARLGESLPDGVEPAYDGLE 251 >gi|315499859|ref|YP_004088662.1| metal-dependent hydrolase [Asticcacaulis excentricus CB 48] gi|315417871|gb|ADU14511.1| metal-dependent hydrolase [Asticcacaulis excentricus CB 48] Length = 269 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 141/259 (54%), Gaps = 4/259 (1%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG--SNTTVIVDTGPDFY 65 TILG G S GVPR G WG CDP NPKNRR+R S T V+VDT PDF Sbjct: 7 TILGSGCSTGVPRADGFWGRCDPCNPKNRRSRCSALFQAFDPLSPEQTTNVVVDTSPDFR 66 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+++ + +DAVL+TH HAD HGID +R + L +K + Y + L F Y Sbjct: 67 TQIMQTGINHLDAVLWTHDHADQTHGIDDMRAFALLRKMQVPGYMDEATRQTLLSRFDYI 126 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F YPPI P+ + + GG + + Q HG I S+G+R G+VAY + Sbjct: 127 FAG--KFGYPPICAPMALPLFGETFHLTGEGGEVPVVTFDQIHGPIRSVGYRIGDVAYSS 184 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D++ P +S L L ++DAL+ H +H L +L+ I + P+ A+LT++H ++D Sbjct: 185 DISDLPEDSFAHLYGLKVWVVDALRYSPHPTHAHLDLALEWIARVKPELAVLTNLHQEMD 244 Query: 246 YDMVLKSTPSRVVPAFDGM 264 Y+ + + P VVPA+D M Sbjct: 245 YEELRANLPDGVVPAYDQM 263 >gi|254417891|ref|ZP_05031615.1| hypothetical protein BBAL3_201 [Brevundimonas sp. BAL3] gi|196184068|gb|EDX79044.1| hypothetical protein BBAL3_201 [Brevundimonas sp. BAL3] Length = 264 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 3/260 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILG G+S GVPR GDWG CDP P+NRRTR S+ + G T +++DT PD Sbjct: 3 FEVVILGSGSSGGVPRGDGDWGVCDPAEPRNRRTRCSMLARKTGPEGM-TNILIDTSPDL 61 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +DAVLYTH HAD HGID LR + + ++ I + + L F Y Sbjct: 62 REQMLASGTRHVDAVLYTHDHADQTHGIDDLRTFATRARKRIPAWMDEATLTSLSHRFDY 121 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F++ YPP+++ VI + ++ GG I + Q HG I S+G+R G++AY Sbjct: 122 IFES--KFGYPPLLDAQVIPPHGTAWSVEGPGGAIPVVTFDQGHGPIRSVGYRLGDMAYS 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 +DV+ ++ + I+DAL+ H +H L +L+ I + + A+LT++H+D+ Sbjct: 180 SDVSDLDEAAIRAVAGCQVWIVDALRYTPHPTHAHLDRTLEWIAAADVERAVLTNLHIDM 239 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY + P+ V FDG Sbjct: 240 DYKELSAIVPANVEVGFDGW 259 >gi|332184921|ref|ZP_08386670.1| metallo-beta-lactamase superfamily protein [Sphingomonas sp. S17] gi|332014645|gb|EGI56701.1| metallo-beta-lactamase superfamily protein [Sphingomonas sp. S17] Length = 254 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 133/262 (50%), Gaps = 18/262 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG S GVPRI DWGACDP P+NRR R S + N +++DTGPD Q+ Sbjct: 5 ILGCGTSSGVPRIGNDWGACDPQEPRNRRMRQSALVEH-----DNVHILIDTGPDMREQL 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V ++DAV++TH HADH HGID LR + P+ YA P+ + L F Y F Sbjct: 60 LAADVATVDAVIWTHDHADHCHGIDDLRQIYHALGEPVTGYARPNTAQSLQNRFGYVFHG 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 YPP E++ G I + Q HGRI S G RF ++ Y Sbjct: 120 --KTGYPPTATMAAFEDS-------LTIGDIHIRSVDQPHGRICSAGLRFECNGKSIGYA 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + E + +D I+DAL+ H +H L L IE + PK ++L HM + Sbjct: 171 TDFHDLTPEMAALYEGVDIWIVDALRRHPHPAHADLPSVLHWIEALRPKRSVLIHMDQSM 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + + P V PA+DGM+ Sbjct: 231 DYATLCRELPDHVEPAYDGMEL 252 >gi|262277650|ref|ZP_06055443.1| metallo-beta-lactamase family protein [alpha proteobacterium HIMB114] gi|262224753|gb|EEY75212.1| metallo-beta-lactamase family protein [alpha proteobacterium HIMB114] Length = 254 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/258 (39%), Positives = 152/258 (58%), Gaps = 16/258 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVP+I GDWG C N KN RTR S+ + + N I+DT PD Q+ Sbjct: 8 ILGCGSSQGVPKIDGDWGQC-KKNIKNIRTRCSIFV-----QIKNIKFIIDTSPDIRFQL 61 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+ ++ +ID L+TH HADHI GI+ LR +++KQK+ ++Y K L + F+Y F Sbjct: 62 LKNKIDNIDFALFTHAHADHILGINELRTFYIKQKKKFNIYLTKFTEKSLKKMFKYLF-- 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ + YP ++ +I N K I+AI ++ HG + ++G+R N AY D Sbjct: 120 INQKNYPAVLKSNIILNKK-----KVRNLNIQAINVI--HGTMKTIGYRINNFAYIPDFK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY-D 247 L+KLQNLD LIID + H++H +L+E L I+ INPK A LT+++ DLDY Sbjct: 173 KINNSELKKLQNLDVLIIDCFRYKEHNTHVNLTECLHYIKNINPKKAYLTNLNQDLDYFK 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + K + + P++DG++ Sbjct: 233 LKKKIKKNNINPSYDGLK 250 >gi|209964483|ref|YP_002297398.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] gi|209957949|gb|ACI98585.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] Length = 257 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 107/259 (41%), Positives = 142/259 (54%), Gaps = 13/259 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S GVP I WG CDP+NPKNRR R S+ + E G+ T V+VDT PD Q Sbjct: 4 TILGCGGSSGVPLIGNVWGRCDPSNPKNRRRRPSILV----ESGA-TRVLVDTTPDLREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ V +D VL+TH HADH HGID LR +R IDV+ D + L F YCF+ Sbjct: 59 LIDAGVQYLDGVLFTHAHADHCHGIDDLRAMNWLMRRTIDVWGDADTLAQLHARFAYCFQ 118 Query: 128 ALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P + + D P + G +E P +Q HG SSLGFRFG AY TD Sbjct: 119 PHPESEF--YARPALRSHRADGPFRI----GSLEIEPFVQDHGLSSSLGFRFGRFAYSTD 172 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 V + L+ ++ I+D ++ H H L+ +L IE + PK AILTHM+ +D Sbjct: 173 VVRLDEAAFRVLEGVETWIVDCVRIEPPHPVHAHLAVTLSWIERLKPKRAILTHMNHMMD 232 Query: 246 YDMVLKSTPSRVVPAFDGM 264 Y+ + P V P +DGM Sbjct: 233 YETLRAILPPGVEPGYDGM 251 >gi|294011650|ref|YP_003545110.1| PhnP protein [Sphingobium japonicum UT26S] gi|292674980|dbj|BAI96498.1| PhnP protein [Sphingobium japonicum UT26S] Length = 259 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 143/262 (54%), Gaps = 18/262 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVPRI DWGACDP PKNRRTR+S+ I + R +++DT PD Sbjct: 5 LTILGSGTSSGVPRIGNDWGACDPQEPKNRRTRASILIESPTTR-----LLIDTSPDMRA 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V+ IDA+L+TH HADH HG+D +R + + P+ YA P ++ L E F Y F Sbjct: 60 QLLAADVVRIDAILWTHDHADHSHGLDDVRQLYHHRGTPVPGYARPQTLRLLRERFGYAF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VA 182 + Y P + P + +P ++ G I Q HG I S GFRF + + Sbjct: 120 EGR--HGYHPTIEP-----HALPDGLRI--GDISIACTDQPHGEIFSTGFRFTHDGHSIG 170 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + A+ L LD ++DAL+ H +H L+ +L ++ + P+ AIL HM Sbjct: 171 YATDFHDITADMLALYDGLDIWVVDALRERPHPTHAHLALTLDAVQAVRPRRAILIHMDQ 230 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 +DY + ++ P V P +DG+ Sbjct: 231 SMDYATLCRTLPEGVEPGYDGL 252 >gi|330994633|ref|ZP_08318556.1| Octanoyltransferase [Gluconacetobacter sp. SXCC-1] gi|329758274|gb|EGG74795.1| Octanoyltransferase [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/266 (36%), Positives = 148/266 (55%), Gaps = 15/266 (5%) Query: 9 ILGCGASLGVPRI-----TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGC S GVP + GDWG CDP P+NRRTRSS+ I + G ++VDTGPD Sbjct: 5 ILGCAGSAGVPMLGGPDGAGDWGECDPGEPRNRRTRSSVII----DDGPGRRLLVDTGPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +++ ++DAV+YTH HADHI G+D LR P+ VY + M + F Sbjct: 61 LRDQLLAQRIGTVDAVVYTHAHADHIAGLDELRTINRIIGGPLPVYGTVEVMDEISVRFD 120 Query: 124 YCFKALDDRTYPPIVNPIV-IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ T P I P++ + + +P AG ++ Q+HGR +LG R G +A Sbjct: 121 YAFRPW---TPPRIFRPVLDVHHVALPSTRTMAGMTVQLF--AQRHGRTETLGLRAGPMA 175 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +LE L+ +D +I + +H SH +++ L+ ++I P+ +LTHM Sbjct: 176 YCTDVAELDDTALETLRGVDTWVIGCFQREVHPSHGWVAQVLRWRDIIQPRRTVLTHMGP 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 D+D+ + + P V A+DG++ + Sbjct: 236 DMDWGWMQANLPDGVEAAYDGLRLHA 261 >gi|83593034|ref|YP_426786.1| beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] gi|83575948|gb|ABC22499.1| Beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] Length = 267 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/260 (40%), Positives = 134/260 (51%), Gaps = 10/260 (3%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT-TVIVDTGPDFYMQ 67 ILGCG + GVP I WGACDP P+NRR R S+ I E G+ ++VD PD Q Sbjct: 5 ILGCGGAAGVPAIAAGWGACDPGEPRNRRLRPSILIEEDGEGGAPPHRLLVDASPDLRQQ 64 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V ++D V+ TH HADH HGID LR R +D++A + + L + F YCF Sbjct: 65 LLGAGVRALDGVVITHAHADHTHGIDDLREINRAMGRSLDLWATAEVLGDLCQRFDYCFT 124 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---QQHGRISSLGFRFGNVAYC 184 AL I P++ VP + + I A P+ Q HG +LG R G AY Sbjct: 125 ALAAEATS-IYKPMI-----VPREITTPSFTIGAFPLRTFPQSHGWGETLGLRIGAFAYS 178 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV A + L +D I+D H +H L ++L IE + P+ AILTHM L Sbjct: 179 TDVVALDEAAFAALAGIDTWIVDCFALQPHPTHAHLDKTLAWIERLKPRQAILTHMGPGL 238 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY L P VVPA DGM Sbjct: 239 DYRATLDRLPPGVVPAHDGM 258 >gi|124002837|ref|ZP_01687689.1| lipoyltransferase [Microscilla marina ATCC 23134] gi|123992065|gb|EAY31452.1| lipoyltransferase [Microscilla marina ATCC 23134] Length = 255 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/268 (37%), Positives = 150/268 (55%), Gaps = 25/268 (9%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I D C + +++R R+++ I N +++VDTGPDF Q Sbjct: 4 TVLGSGTSQGVPVIACDCEVCQSLDYRDQRLRAAIHIE-----VDNQSIVVDTGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ S+DAVLYTH H DH G+D LR + KQ++ + VYA + M+ L + F Y F Sbjct: 59 MLRERITSLDAVLYTHQHKDHTAGMDDLRSFNFKQEKDVPVYARAEVMQQLKQEFAYIFV 118 Query: 128 ALDDRTYPPIVN--PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 A ++ YP ++N +IEN I G I IPI H ++ GFR N Y T Sbjct: 119 A-KEKKYPGVLNIEEFIIENRPFDI----NGTTI--IPIEVLHHKLPVFGFRVQNFTYVT 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH------ 239 D N +EK++ +FLI+DAL+ H SHF++ ++L+ I + PK A LTH Sbjct: 172 DTNYIADNEIEKMKGTEFLILDALRKEEHISHFNIDQALEVIAKVQPKQAYLTHISHKMG 231 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 +H D++ ++ P V A+DG+Q Sbjct: 232 LHADVNAEL-----PENVQLAYDGLQIE 254 >gi|294083930|ref|YP_003550687.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663502|gb|ADE38603.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 259 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/262 (38%), Positives = 147/262 (56%), Gaps = 10/262 (3%) Query: 8 TILGCGASLGVPRI-TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG S+GVP + WGACDPT+P+NRR R ++ I + +TT++VD GPD Sbjct: 4 TMLGCGTSVGVPALGNAGWGACDPTDPRNRRQRCAMLIQK-----DDTTILVDAGPDIRN 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + IDAVL TH H+DH+ G+D LR ++ + I +YA + F Y F Sbjct: 59 QLLPHMLKKIDAVLITHTHSDHVAGLDDLRAFYWPDRNIIPLYATASSRTDIVNRFPYLF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCT 185 + ++ V P+ + ++ G I + Q+HG ISSLGF F G Y T Sbjct: 119 TK-NPKSPSYFVPPMDV--TEIKAGQTLNFGSINIDVLHQEHGNISSLGFVFNGKFGYST 175 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P ES KL++LD I++AL+ HSSH + IE + PK+A+LTH+ ++ D Sbjct: 176 DVIDMPEESFAKLRDLDLWIVEALRPEPHSSHSHYENTFAWIEAMKPKHAVLTHLGLEAD 235 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y + + P+ V P DG+ F+ Sbjct: 236 YAELAELCPAHVEPGVDGLSFT 257 >gi|288958661|ref|YP_003449002.1| PhnP protein [Azospirillum sp. B510] gi|288910969|dbj|BAI72458.1| PhnP protein [Azospirillum sp. B510] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 101/263 (38%), Positives = 139/263 (52%), Gaps = 17/263 (6%) Query: 8 TILGCGASLGVPRITG----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGCG S GVP + G WG CDP NPKNRR R S+ + R +V+VD+ PD Sbjct: 14 TVLGCGGSRGVPAVAGVPGGQWGRCDPANPKNRRMRPSVLVER-----DGVSVLVDSSPD 68 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +DAVL+TH HADH HGID LR + PID Y + ++ + F Sbjct: 69 LRQQLLDSGCSRLDAVLWTHQHADHCHGIDELREICRQMHAPIDAYGWDEHLRDIETRFP 128 Query: 124 YCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 YCF L D P P++ + D P +K +E P Q HG + ++G+RFG A Sbjct: 129 YCFAPLPDGY--PFYRPVLKTHRIDGPFTVKG----LEVTPFEQDHGYMRTVGYRFGGFA 182 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TDV + L +D ++D + H H L+ +L IE + P+ A LTHM Sbjct: 183 YSTDVVRLDDRAFAALAGVDTWMVDCGRIEPPHPVHAHLALTLTWIERVRPRRAYLTHMD 242 Query: 242 VDLDYDMVLKSTPSRVVPAFDGM 264 +DYD + + P+ V PA+DGM Sbjct: 243 NTMDYDSLRRILPAGVEPAYDGM 265 >gi|163788321|ref|ZP_02182767.1| metal-dependent hydrolase [Flavobacteriales bacterium ALC-1] gi|159876641|gb|EDP70699.1| metal-dependent hydrolase [Flavobacteriales bacterium ALC-1] Length = 253 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 104/261 (39%), Positives = 147/261 (56%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I D C NPK++R R S+ + N T +VD GPDF Q Sbjct: 4 TFLGTGTSQGIPIIGSDHPVCLSDNPKDKRLRVSILVE-----WDNFTYVVDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR VL ID +++TH HADH G+D +R +F +Q I +YA K L F Y F Sbjct: 59 MLRANVLKIDGIIFTHEHADHTMGLDDIRPFFFRQG-DISLYAHKRVFKALESRFDYIFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + ++ YP + P VI++ K G IE IP+ H ++ GFRF + AY TD+ Sbjct: 118 S--EKKYPGV--PSVIKHEIKNEVFKV--GNIEVIPVDGLHHKLQVFGFRFKDFAYLTDM 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 E +EKL+NLD L+++AL+ H SHF+L E+L+ I L+NPK A LTH+ H+ + Sbjct: 172 KTVKGEEVEKLKNLDVLVVNALREKPHISHFNLEEALEFIHLVNPKRAYLTHVSHLLGFH 231 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 D V + P V A+D +Q + Sbjct: 232 DDVQQKLPDNVFLAYDNLQIT 252 >gi|253996503|ref|YP_003048567.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253983182|gb|ACT48040.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 253 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 19/265 (7%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G+S G P I C T+ +N RTR S I+ + +++DTGPD Sbjct: 2 QLTMLGVGSSAGTPMIGCQCSTCISTDKRNHRTRCSSAITL----DNGKVILIDTGPDLR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q LRE+++++DAVLYTH HADH+HGID LR Y +Q+ I +Y +PD M+H+ + F Y Sbjct: 58 QQALRERLMNVDAVLYTHTHADHLHGIDDLRAYCQRQRCQIPLYGSPDAMRHIADKFGYT 117 Query: 126 FKALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEA--IPILQQHGRISSLGFRFGNV 181 + D PI VNP++ S+ + E PI +HG G+R GN+ Sbjct: 118 LREAGDFWDLPILKVNPVI-----------SSFSLFEQTITPIPIKHGHSDIYGYRIGNL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TDV+A PA S+E L ++D L++D L+ H +H +L +SL I K L HM Sbjct: 167 VYLTDVSAVPASSMEFLNDVDVLLLDCLRITPHYTHVNLEQSLALASQIGAKATYLIHMT 226 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 DL+Y + P+ V +DG++ Sbjct: 227 HDLEYAELSAQLPANVFVGYDGLKI 251 >gi|114327743|ref|YP_744900.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] gi|114315917|gb|ABI61977.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] Length = 263 Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 99/268 (36%), Positives = 143/268 (53%), Gaps = 24/268 (8%) Query: 9 ILGCGASLGVPRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG S GVP++ G DWGACDP+ P+N+RTRSS+ I + R +++DTGPD Sbjct: 6 ILGCGGSAGVPQLGGEDGRGDWGACDPSEPRNQRTRSSILIEQDGRR-----LLIDTGPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + IDAVL+TH HADHI G+D +R +PID Y +P ++ L F Sbjct: 61 LRAQLLATGIAGIDAVLFTHAHADHITGLDDVRILNRLTGKPIDAYGSPKTIEELTLRFD 120 Query: 124 YCFKALDDRT-YPPIVNP-IVIENNDVPICMKSAGGVIEAIPIL---QQHGRISSLGFRF 178 Y F+ Y P++ P V D+ I P+ Q HG + SLG R Sbjct: 121 YAFRPWKPSGFYRPVLVPHQVAAGQDL---------TIAGFPVTLLDQDHGYVRSLGLRI 171 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G AY TDV A AE L++L+ +D ++ + H++H ++ + I + +LT Sbjct: 172 GRFAYSTDVVAMDAEVLDRLKGIDTWVVGCFQRQKHATHAHIALVAQWAARIGVRRTVLT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 HM DLD+ + + P + P FDGM+ Sbjct: 232 HMGYDLDWAWMQANLPPGLEPGFDGMEI 259 >gi|258542243|ref|YP_003187676.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01] gi|256633321|dbj|BAH99296.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01] gi|256636380|dbj|BAI02349.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-03] gi|256639433|dbj|BAI05395.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-07] gi|256642489|dbj|BAI08444.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-22] gi|256645544|dbj|BAI11492.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-26] gi|256648597|dbj|BAI14538.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-32] gi|256651650|dbj|BAI17584.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654641|dbj|BAI20568.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-12] Length = 264 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 143/269 (53%), Gaps = 13/269 (4%) Query: 8 TILGCGASLGVPRITGD-----WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LGCG S GVP + G WGAC+P P+N RTRSS+ + + G V+VDTGP Sbjct: 4 TVLGCGGSAGVPMVGGADGHGIWGACNPKEPRNTRTRSSILLRLKNGAG----VLVDTGP 59 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L + +++++TH HADHI G+D +R ++P+ Y A + ++ + F Sbjct: 60 DLRAQLLANGIKDFESIIFTHAHADHISGLDEVRAINRVIQKPLHAYGAAETLEDIQRRF 119 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y FK PP V+E + V + E I Q HGR+ S G R G+ Sbjct: 120 DYVFKPW----TPPNFFRAVVEAHPVKMGQPVTISGTEFILFDQVHGRVGSTGVRCGDFV 175 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TDV FP +S+E L+ +D ++D + HS+H L L+ + INP+ ILTHM Sbjct: 176 YSTDVMEFPEDSVEVLRGVDTWMVDCFQRQPHSAHAWLERVLEWQQAINPRRMILTHMGP 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 D+D+ + P+ + PA+DG F P Sbjct: 236 DMDWQWMQDHLPAGIEPAWDGAVFEVADP 264 >gi|225874891|ref|YP_002756350.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] gi|225791495|gb|ACO31585.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] Length = 263 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 143/259 (55%), Gaps = 9/259 (3%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S+GVP + C T+P+NRR R S+ + E G+ V++DTGPDF Q Sbjct: 7 ILGSGTSMGVPTLGCTCAVCTSTDPRNRRMRPSIAVEWQWE-GAPRRVLIDTGPDFREQA 65 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFESFRYCF 126 LR V +DAV YTHPHADHI G+D LR + RP + +YA + + L F Y F Sbjct: 66 LRSGVHHVDAVFYTHPHADHILGLDDLRPLSFRH-RPNYLPLYADANTARILERVFEYTF 124 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 V I+ +D + AG + +P+ QHG + GFRFGN AY TD Sbjct: 125 SPASQYPTRARVQLFPIDGHDT---TQVAGAAFQRVPL--QHGNVEVSGFRFGNAAYLTD 179 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + + P SL L+ LD +I+DAL+ H SH +L E+L +E++ P+ A THM ++D+ Sbjct: 180 MKSIPDASLPLLEGLDVMILDALRPQEHPSHANLEEALHWVEVVKPRQAWFTHMSHEIDH 239 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 + + P V ++DG++ Sbjct: 240 EATEATFPPHVRLSYDGLR 258 >gi|307292795|ref|ZP_07572641.1| PhnP protein [Sphingobium chlorophenolicum L-1] gi|306880861|gb|EFN12077.1| PhnP protein [Sphingobium chlorophenolicum L-1] Length = 259 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 142/262 (54%), Gaps = 18/262 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVPRI DWGACDP PKNRRTR+S+ + + R +++DT PD Sbjct: 5 LTILGSGTSSGVPRIGNDWGACDPQEPKNRRTRASILVESPTTR-----LLIDTSPDMRA 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V+ IDA+L+TH HADH HG+D +R + + P+ YA P +K L E F Y F Sbjct: 60 QLLAADVVQIDAILWTHDHADHSHGLDDVRQLYHHRGTPVPGYARPQTLKLLRERFGYAF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 + I+ + +P ++ G I Q HG I S GFRF ++ Sbjct: 120 EGRHGYH-------ATIDAHALPDGLRI--GDIGIACTDQPHGEIYSTGFRFTYDGHSIG 170 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + + L +LD ++DAL+ H +H L+ +L ++ + P+ AIL HM Sbjct: 171 YATDFHDITPDMLALYDDLDIWVVDALREKPHPTHAHLALTLDAVQAVRPRRAILIHMDQ 230 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 +DY + ++ P+ V P +DG+ Sbjct: 231 SMDYATLCRTLPAGVEPGYDGL 252 >gi|148262634|ref|YP_001229340.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146396134|gb|ABQ24767.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 251 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 98/258 (37%), Positives = 149/258 (57%), Gaps = 13/258 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP + C +P+++RTR+S+ + S ++VDT D Sbjct: 3 ITILGSGTSTGVPMVGCSCPVCSSEDPRDKRTRASIIVE-----CSGKYILVDTSTDLRK 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q +RE++ IDAVL+TH HADHIHGID LRG+ R I Y + D ++ + +F Y F Sbjct: 58 QAIRERIPHIDAVLFTHSHADHIHGIDDLRGFHFIHHRVIPCYGSEDSIETIARNFSYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K ++ Y P++ P V+ + ++ G I+ IP+L HG + + G+RF ++AY TD Sbjct: 118 KGMETAGYSPLLEPHVVNDR-----IELFGCAIDPIPLL--HGTMPATGYRFNDMAYLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +A P S KL L LIIDAL+ H +HF++ +L+ +E + P+ A+LTH+ ++ Y Sbjct: 171 CSAIPDHSRAKLGGLKLLIIDALRYTPHPNHFNIEGALQVVEKLRPERAVLTHLTHEVPY 230 Query: 247 DMVLKSTPSRVVPAFDGM 264 K P+ V A+DGM Sbjct: 231 RDGEK-LPAGVEFAYDGM 247 >gi|222054482|ref|YP_002536844.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221563771|gb|ACM19743.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 251 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP + C + +++RTR+S+ I + ++VDT D Sbjct: 3 LTILGSGTSTGVPMVGCHCPVCSSGDRRDKRTRASIIIEN-----NGKYILVDTSTDLRK 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 QV+RE + IDAVL+TH HADHIHGID LRG+ KR I Y + + MK + +F Y F Sbjct: 58 QVIREHIPHIDAVLFTHSHADHIHGIDDLRGFHFIHKRIIPCYGSEESMKVIARNFSYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K ++ Y P+ +E N + M G +E IP++ HG + + G+RF +VAY TD Sbjct: 118 KGMEAAGYAPL-----MEQNIISGPMDLFGCRVEPIPLM--HGHMPTTGYRFDDVAYLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ S KL L LI+DAL+ H +H+++ +LK +E + P++AILTH+ ++ Y Sbjct: 171 CSSIADTSRAKLAGLRLLILDALRYTPHPNHYNIEGALKVVEDLRPEHAILTHLTHEVSY 230 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 K PS V A+DGM F+ Sbjct: 231 SDGAK-LPSGVEFAYDGMSFA 250 >gi|296122537|ref|YP_003630315.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] gi|296014877|gb|ADG68116.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] Length = 255 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 101/264 (38%), Positives = 144/264 (54%), Gaps = 22/264 (8%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP I C NP+NRRTRS V+ ++DT P+ +Q+ Sbjct: 3 LLGTGTSHGVPIIGCHCPICLSENPRNRRTRSG-----VAVEAPEGLFLIDTSPELRIQL 57 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +RE++ + A +YTH HADHI G+D LR + + RPI +Y + L +F Y F Sbjct: 58 IREKIDLVHAAIYTHSHADHIFGLDDLRLFGYRLNRPIPLYCEEIVEQQLRAAFSYAF-- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGV-------IEAIPILQQHGRISSLGFRFGNV 181 PP P + VP+ + + +PI HG++ LGFR GNV Sbjct: 116 -----VPP---PPDLHMGAVPMLKFERLSLEPFQLLGLNILPIRLMHGKLPVLGFRIGNV 167 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A+CTDV+ P ESLE+L LD LIIDAL++ H++HF + ++L+ I+L PK A LTH+ Sbjct: 168 AFCTDVSFIPEESLERLMGLDVLIIDALRDTPHATHFGIPQALEIIQLTQPKRAFLTHVS 227 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQ 265 LDY+ K P V A+DG++ Sbjct: 228 HHLDYETTNKRLPPHVELAYDGLR 251 >gi|168702138|ref|ZP_02734415.1| hypothetical protein GobsU_21600 [Gemmata obscuriglobus UQM 2246] Length = 265 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 148/262 (56%), Gaps = 9/262 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT LG G S+GVP + D C NP+N R R S+ +S + +++DT P+ + Sbjct: 11 FTFLGTGTSMGVPMLGCDCHVCTSDNPRNHRYRCSVLVS-----NAQGNLLIDTAPEMRL 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LRE V + AV YTH H DH+ G+D LR + +K P+ +Y + + ++F Y F Sbjct: 66 QLLRENVKLVHAVAYTHYHVDHLFGLDDLRIFPVKLNGPLPMYCTDETEAIIRQAFAYVF 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 A +P + P + + G + +P++ HGR + LGFR GNVAYCTD Sbjct: 126 -APGSEDFPLGMLPRLDLRRIDERPFEVLGETVTPVPLI--HGRFNVLGFRIGNVAYCTD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 V+ P S L+ LD +IDAL+ G H SHF L ++L+ I + PK A LTHM ++ Sbjct: 183 VSHIPDRSWPLLEGLDVFVIDALRPGKPHPSHFGLDQALEVIAKVKPKKAYLTHMAHTME 242 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y+ ++++ P V PA+DG++F+ Sbjct: 243 YEELMRTLPPNVEPAYDGLKFT 264 >gi|255022088|ref|ZP_05294092.1| Metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Acidithiobacillus caldus ATCC 51756] gi|254968446|gb|EET26004.1| Metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Acidithiobacillus caldus ATCC 51756] Length = 256 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 140/261 (53%), Gaps = 14/261 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G+S G P++ D C +P+NRR+R+S+ + ++VDTGPD Q+ Sbjct: 7 FLGTGSSAGTPQVGCDCAVCRSDDPRNRRSRASILVE-----AEGVALLVDTGPDLRQQL 61 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE V ++ AVLYTH HADHI+GID LR + QK+ +D Y K L E FRYCF Sbjct: 62 LRENVRALTAVLYTHFHADHINGIDDLRAFNFLQKQVLDCYGDVRTGKELEERFRYCFLP 121 Query: 129 LDDRTYPPIVNP-IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D P P + + + D P G + P+ HG + G+RF +VAY TD+ Sbjct: 122 PD----PAWAKPSLRMHHLDGP----REFGPLRVTPVPVLHGHLQIFGYRFNDVAYLTDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S+ LQ LD LI+D L+ H +H +++E++ + I + THM DL + Sbjct: 174 KRIPESSMALLQKLDILILDCLREEEHPTHINVTEAIALAKEIGARYTYFTHMTHDLGFA 233 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + + P + PA+DG+Q S Sbjct: 234 SLAERLPEGMAPAYDGLQIRS 254 >gi|320105944|ref|YP_004181534.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] gi|319924465|gb|ADV81540.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] Length = 271 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/270 (37%), Positives = 146/270 (54%), Gaps = 10/270 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS--RVSERGSNTT---VIVDTG 61 T LG G S+GVP + C T+P+N R R S+ I SER ++ V++DTG Sbjct: 5 LTFLGSGTSMGVPTLGCTCAVCTSTDPRNNRMRPSVAIRFHEASERNADARERLVLIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +F +Q LR+ +L +DAVLYTHPHADHI G+D LR K P +YA D + + Sbjct: 65 QEFRIQALRDHILRVDAVLYTHPHADHILGLDDLRPLTFKNATPTPLYADADTIATIRRI 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-EAIPILQQHGRISSLGFRFGN 180 F Y F+ + YP ++E VP GV+ E + ++ HGR GFRFG+ Sbjct: 125 FDYTFRT--ENRYPTSARVELVEIPTVPGTTIDIHGVLFERVAVI--HGRSEITGFRFGS 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TD++ +S+++L NLD LI+DAL+ H SH L +S+ + I K TH+ Sbjct: 181 AAYLTDMSDLSEDSIKRLANLDILILDALRREPHPSHSHLDKSIALAQRIGAKRTYFTHI 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLD+ V P+ + A+DG++ I Sbjct: 241 SHDLDHGPVSAELPAGIYLAYDGLRLEFEI 270 >gi|322417951|ref|YP_004197174.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320124338|gb|ADW11898.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 251 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 143/257 (55%), Gaps = 13/257 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G S GVP + C ++P+++RTR+S+ + +R ++VDT D +Q Sbjct: 4 TILGSGTSTGVPMVGCHCQVCGSSDPRDKRTRASILVESCGQR-----ILVDTSTDLRVQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + IDAVL TH HADHIHGID LRG+ +R I YA+ D M + +F Y F+ Sbjct: 59 ALREGIPQIDAVLLTHTHADHIHGIDDLRGFHFIHRRVIPCYASRDTMDKVRANFSYIFE 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L Y P++ +E+ G I +PI HG + G+RF N AY TD Sbjct: 119 GLSSEGYSPLLESFPVEDP-----FDLFGCRITPVPI--SHGSFLATGYRFDNAAYLTDC 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P +SL LQ LD +IIDAL+ H +HF++ +LK E++ P+ +LTH+ ++ + Sbjct: 172 SEIPEQSLPLLQGLDLMIIDALRFSPHPNHFNIEGALKMSEILKPRRTLLTHLTHEVHHS 231 Query: 248 MVLKSTPSRVVPAFDGM 264 + P V A+DG+ Sbjct: 232 DG-QRLPQGVEFAYDGL 247 >gi|220931941|ref|YP_002508849.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219993251|gb|ACL69854.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 252 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/257 (37%), Positives = 147/257 (57%), Gaps = 12/257 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I + C NP+N+RTRSS+ + + + +++VDT P+ +Q+L Sbjct: 6 LGTGTSHGVPVIGCNCKTCQSKNPRNKRTRSSIYV-----KFESFSILVDTPPELRLQLL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + +DA+LYTH HADHI G D +R + L KRP+ Y +K + +F Y F A+ Sbjct: 61 NNGIHKVDAILYTHSHADHIMGFDDIRAFNLINKRPLPCYGNSSTIKDIKRTFNYIFNAV 120 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P V +IE N I+ IP+ +HG++ LG+RFG +AY TD + Sbjct: 121 QMGGGLPQVQ--LIEVNSTFFIED-----IKIIPLPVKHGKLDILGYRFGRIAYITDCSH 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P + +KL+ LD LIIDAL+ H +H ++SE+L+ IE A LTH+ ++++ + Sbjct: 174 IPESTYDKLEGLDILIIDALRYRPHPTHMNISEALEVIEKTGVSRAYLTHLSHSVEHEEL 233 Query: 250 LKSTPSRVVPAFDGMQF 266 K+ PS V PA+DG++ Sbjct: 234 KKNLPSWVRPAYDGLKI 250 >gi|58038505|ref|YP_190469.1| PhnP protein [Gluconobacter oxydans 621H] gi|58000919|gb|AAW59813.1| PhnP protein [Gluconobacter oxydans 621H] Length = 265 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/264 (40%), Positives = 145/264 (54%), Gaps = 15/264 (5%) Query: 8 TILGCGASLGVPRI-------TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 TILGCG S GVP I TG WGACDPT P+NRRTRSS+ I E ++VD+ Sbjct: 4 TILGCGGSAGVPMIGGEEGPRTGIWGACDPTEPRNRRTRSSVVI----EGEGGFRLLVDS 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + + AVLYTHPH+DHI G+D LR + P+ + AAPD ++ L Sbjct: 60 GPDFRNQMLNCGLSHVHAVLYTHPHSDHIGGLDELRAINRVIETPLPLLAAPDVLEELRL 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + Y F P P+ E+ P + G+ I Q+HGRI+SLG R GN Sbjct: 120 RYAYAFAPWKG---PEFYRPVFDEHVVQPGETVTFPGLTARI-FEQRHGRITSLGVRCGN 175 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TDV ESL L+ + I+D + H +H L L+ E + + ILTHM Sbjct: 176 FAYSTDVETLSEESLSLLEGVQTWIVDCFQYEPHPAHAWLERVLEWRERLGVGHVILTHM 235 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGM 264 ++DY + ++ P+ V PA+DGM Sbjct: 236 GPEMDYQTLRQTLPAGVEPAYDGM 259 >gi|209542219|ref|YP_002274448.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209529896|gb|ACI49833.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 262 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 139/273 (50%), Gaps = 25/273 (9%) Query: 6 HFTILGCGASLGVPRI-----TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LGCG S GVP I GDWG CDP P+NRRTR+S+ + RG + V++DT Sbjct: 2 ELIVLGCGGSAGVPMIGGPDGAGDWGVCDPAEPRNRRTRASVLL-----RGGDGAVLLDT 56 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L +++ DA+LYTH HADHI G+D +R RP+ VY P + L Sbjct: 57 GPDLRDQLLAQRIDRFDAILYTHAHADHIAGLDEVRAINRVIDRPLPVYGTPPVLTDLEN 116 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI-----LQQHGRISSLG 175 F Y F+ +P V + AG +E + Q HGR SLG Sbjct: 117 RFNYAFRPW---------SPPGFYRPVVVPHVVHAGQTLEVAGLHLRLFEQIHGRTLSLG 167 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKN 234 R G +AY TDV P E+ L ++ ++D ++ HS+H L L+ I P+ Sbjct: 168 VRCGTIAYSTDVVELPDEAFAALAGIETWVVDCFQRSAAHSAHAWLDRVLEWRARIAPRR 227 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ILTHM D+D+ + + P V AFDGM+ + Sbjct: 228 VILTHMGPDMDWAWMRANLPDGVEAAFDGMRVA 260 >gi|163795496|ref|ZP_02189462.1| Beta-lactamase-like protein [alpha proteobacterium BAL199] gi|159179095|gb|EDP63628.1| Beta-lactamase-like protein [alpha proteobacterium BAL199] Length = 262 Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/266 (38%), Positives = 135/266 (50%), Gaps = 11/266 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG S+GVP ++G WG CDPT P+NRR R S+ I + R ++VD PD Sbjct: 4 LTMLGCGGSVGVPSLSGGWGLCDPTEPRNRRRRCSILIEKAGRR-----ILVDASPDLRE 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V SIDAVL+TH HADH HGID LR + + I YA P L F Y F Sbjct: 59 QLLDADVQSIDAVLFTHIHADHTHGIDDLRPLYWSAGQRIPAYADPITFADLQARFGYMF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCT 185 +A+ I ++ V G+ + L +SLGF F G +AY T Sbjct: 119 EAVPGSPPHHSPPLI---HHPVDEGRHEVAGITVDVTRLDHGNSGASLGFVFDGQMAYST 175 Query: 186 DVNAFPAESLEKLQ--NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ L+ L LD I+D L+ S+H +L +L IE + P+ A LTHM+ Sbjct: 176 DVHTLTEAQLDDLAAFELDTWIVDCLREEPTSAHSTLERTLGWIERVRPRRAYLTHMNAR 235 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 LDY L P V P +DG+ P Sbjct: 236 LDYRRTLAKCPPGVEPGYDGLVLEIP 261 >gi|118581813|ref|YP_903063.1| beta-lactamase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504523|gb|ABL01006.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379] Length = 255 Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 97/258 (37%), Positives = 137/258 (53%), Gaps = 13/258 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP + C +P++ RTR+SL I R ++VDT D Q Sbjct: 5 ILGSGTSTGVPMVGCGCAVCSSDDPRDVRTRASLLI-----RHGGKNILVDTATDLRHQA 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+V IDAVL+THPHADH++GID LRG+ KR + +A+ L F Y F+ Sbjct: 60 LREKVRHIDAVLFTHPHADHVNGIDDLRGFHFLHKRVVPCFASAATFATLMNGFSYIFRE 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + +Y P++ N P + + IP+ HG IS+LG+R GN AY TD N Sbjct: 120 HEGSSYTPLLKA---HNISAPFELFG----LTVIPVPLTHGAISALGYRIGNFAYLTDCN 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P SL L L+ L+ID L+ H SHF++ ++ + + P ILTH+ D+ Y Sbjct: 173 EIPQSSLPLLWGLEILVIDGLRWNPHPSHFNIETAIAAVSRLRPGRTILTHLSHDVLYSD 232 Query: 249 VLKSTPSRVVPAFDGMQF 266 ++ PS A+DGM+ Sbjct: 233 GVR-LPSGFEFAYDGMEL 249 >gi|298506501|gb|ADI85224.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 251 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 140/261 (53%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP + C T+P+++RTR+SL I + ++VDT PD Sbjct: 3 ITILGSGTSTGVPMVGCTCSVCSSTDPRDKRTRASLLIE-----AAGRYILVDTSPDLRR 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE + IDAVL TH HADH++GID LRG+ +R I Y + + M + +F Y F Sbjct: 58 QALREHIPHIDAVLLTHSHADHVNGIDDLRGFHFIHRRVIPCYGSRETMDAVLRNFSYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K +D Y P+++P VI + P + +PI HG + + G+R AY TD Sbjct: 118 KGMDVAGYAPLLDPHVIRD---PFALFGQ----TIVPIHLHHGTMPATGYRIDGAAYLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P S+ L LD L+IDAL+ H +HF++ +L + + PK I TH+ ++ Y Sbjct: 171 CSRIPESSVALLGGLDLLVIDALRYTPHENHFNIDGALGVVAELRPKRTIFTHLTHEVAY 230 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ P V A+DGM S Sbjct: 231 ADGIR-LPEGVEFAYDGMTVS 250 >gi|94496393|ref|ZP_01302970.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] gi|94424139|gb|EAT09163.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] Length = 263 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/262 (37%), Positives = 136/262 (51%), Gaps = 18/262 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S GVPRI DWG CDP+ PKNRRTR S+ + + R ++VDT PD Sbjct: 5 LTMLGSGTSSGVPRIGNDWGICDPSEPKNRRTRVSILVESATTR-----ILVDTSPDMRA 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V IDA+L+TH HADH HG+D +R + + P+ YA +K L + F Y F Sbjct: 60 QLLSADVAHIDAILWTHDHADHCHGLDDVRQLYHHRGTPVPGYARAQTLKLLKQRFAYAF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 + + Y P + P+ G I+ + Q HG I S GFRF ++ Sbjct: 120 EG--RQGYHPTIAA-------CPLHDSLQIGDIDISCVDQPHGAIYSTGFRFSHDGKSIG 170 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + E L +D ++DAL+ H +H L+ +L+ I P AILTHM Sbjct: 171 YATDFHVITPEMLALYDQVDIWVVDALREKPHPTHPHLAMTLEGIAAARPGRAILTHMDQ 230 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 +DY + + P V P +DG+ Sbjct: 231 SMDYATLCHTLPRGVEPGYDGL 252 >gi|268315780|ref|YP_003289499.1| beta-lactamase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333314|gb|ACY47111.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 270 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/267 (35%), Positives = 139/267 (52%), Gaps = 10/267 (3%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D T+LG G S GVP I C ++P+++RTR + I + +++DTGP Sbjct: 6 DTLRVTLLGTGTSTGVPVIGCTCRVCRSSDPRDKRTRCACYIE-----ANGLGILIDTGP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q LRE + +DAVLYTH H DH+ GID LR +F + R I YA P+ + L+ + Sbjct: 61 DFRQQALREGIRRLDAVLYTHHHFDHVAGIDDLRPFFFENDRAIPCYAPPNTARVLYRMY 120 Query: 123 RYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Y F D TYP P + +E GG + PI HG + G+R G Sbjct: 121 AYIFA---DGTYPGVPRLRLHAVEGPFEVTSRYGDGGRVRVEPIEVLHGELPMYGYRIGR 177 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TD + P S E+L++LD L++DAL+ H +HFS+ E+++ I + HM Sbjct: 178 FAYLTDASRIPETSYERLRDLDVLVLDALRERPHPTHFSIEEAVRVARRIGARQTYFIHM 237 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 D+ + V P + A+DG+QF+ Sbjct: 238 THDVLHAEVDARLPEGINLAYDGLQFT 264 >gi|302340156|ref|YP_003805362.1| beta-lactamase [Spirochaeta smaragdinae DSM 11293] gi|301637341|gb|ADK82768.1| beta-lactamase domain protein [Spirochaeta smaragdinae DSM 11293] Length = 265 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/262 (38%), Positives = 145/262 (55%), Gaps = 17/262 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV-DTGPDFYM 66 TILG G S GVP I C NPKN R+R+S + RG+ VI+ DT P+F + Sbjct: 9 TILGSGTSHGVPVIACICPVCRSKNPKNHRSRASALV-----RGAEDEVILFDTAPEFRL 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE + IDAV YTH HADH+HG+D LR L PI +Y + + M + F Y F Sbjct: 64 QALREGIAHIDAVFYTHAHADHLHGLDDLRP--LSFNGPIPLYGSAETMDEIRRRFSYIF 121 Query: 127 KALDDRTYPP--IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + + P ++ PI E++ I + G +E IPI HG + G+R G AY Sbjct: 122 SSGQEGGGKPKVLLKPIGPEDH---ITI----GSLEVIPIPLLHGSLPVFGYRIGPFAYL 174 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N P S E L+ + F++IDAL+ H +HFS ++L+ + I + A TH+ D+ Sbjct: 175 TDCNIIPEYSYELLEGIRFVVIDALRPEPHPTHFSFGQALEAVRKIGAEKAWFTHLTHDV 234 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 D++ + + P+ V PA+DG+ F Sbjct: 235 DHEDIRRMLPTGVEPAWDGLSF 256 >gi|329113412|ref|ZP_08242193.1| Octanoyltransferase [Acetobacter pomorum DM001] gi|326697237|gb|EGE48897.1| Octanoyltransferase [Acetobacter pomorum DM001] Length = 264 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 139/269 (51%), Gaps = 13/269 (4%) Query: 8 TILGCGASLGVPRITGD-----WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LGCG S GVP + G WGAC+P P+N RTRSS+ + + G V+VDTGP Sbjct: 4 TVLGCGGSAGVPMVGGADGHGIWGACNPKEPRNTRTRSSILLRLKNGAG----VLVDTGP 59 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L + ++++TH HADHI G+D +R ++P+ Y A + ++ + F Sbjct: 60 DLRAQLLANGIKDFQSIIFTHAHADHISGLDEVRAINRVIQKPLHAYGAAETLEDIQRRF 119 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y FK PP V++ + V + E Q HGR+ S G R G Sbjct: 120 DYVFKPWT----PPNFFRAVVQAHPVEMEQPITISGTEFTFFNQVHGRVGSTGVRCGGFV 175 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TDV FP SL+ L+ +D ++D + HS+H L L+ + +NP+ ILTHM Sbjct: 176 YSTDVVEFPEASLDILRGVDTWMVDCFQRQPHSAHAWLERVLEWQQALNPRRMILTHMGP 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 D+D+ + P+ V PA+DG F P Sbjct: 236 DMDWQWMQDHLPAGVEPAWDGAVFEVADP 264 >gi|162147586|ref|YP_001602047.1| putative beta-lactamase-like [Gluconacetobacter diazotrophicus PAl 5] gi|161786163|emb|CAP55745.1| putative beta-lactamase-like [Gluconacetobacter diazotrophicus PAl 5] Length = 262 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 138/273 (50%), Gaps = 25/273 (9%) Query: 6 HFTILGCGASLGVPRI-----TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LGCG S GVP I GDWG CDP P+NRRTR+S+ + RG + V++DT Sbjct: 2 ELIVLGCGGSAGVPMIGGPDGAGDWGVCDPAEPRNRRTRASVLL-----RGGDGAVLLDT 56 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L +++ DA+LYTH HADHI G+D +R RP+ VY P + L Sbjct: 57 GPDLRDQLLAQRIDRFDAILYTHAHADHIAGLDEVRAINRVIDRPLPVYGTPPVLTDLEN 116 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI-----LQQHGRISSLG 175 F Y F+ +P V + AG +E + Q HGR SLG Sbjct: 117 RFNYAFRPW---------SPPGFYRPVVVPHVVHAGQTLEVAGLHLRLFEQIHGRTLSLG 167 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKN 234 R G +AY TDV E+ L ++ ++D ++ HS+H L L+ I P+ Sbjct: 168 VRCGTIAYSTDVVELLDEAFAALAGIETWVVDCFQRSAAHSAHAWLDRVLEWRARIAPRR 227 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ILTHM D+D+ + + P V AFDGM+ + Sbjct: 228 VILTHMGPDMDWAWMRANLPDGVEAAFDGMRVA 260 >gi|32477197|ref|NP_870191.1| phnP protein homolog- hydrolase [Rhodopirellula baltica SH 1] gi|32447748|emb|CAD77266.1| phnP protein homolog-putative hydrolase [Rhodopirellula baltica SH 1] Length = 283 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 98/264 (37%), Positives = 146/264 (55%), Gaps = 15/264 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S+GVP I + C T+P N RTR S+ I R +++DT PD Q+L Sbjct: 28 LGTGTSVGVPAIGCECDVCQSTDPHNNRTRCSILI-----RLPEGNLLIDTPPDLRTQLL 82 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE+V + AVL+TH HADHI+G+D LR + + RP+ +Y D + S+ Y F Sbjct: 83 REKVKLVHAVLFTHEHADHIYGLDDLRLFPFRLGRPVPLYCRADVEARIRTSYDYAFSQR 142 Query: 130 DDR---TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCT 185 + + P + I+ NND P + + P+ +HG LGFR G+ AYCT Sbjct: 143 EQTHAGSRPQLE--ILSINNDDPFEVLG----VRVTPVPLKHGPHFEVLGFRMGDFAYCT 196 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D N S+++L+ LD L++DAL+ H +HF++ E+L+ IE + P+ A LTH+ D+D Sbjct: 197 DTNHISETSMDRLRGLDTLVLDALRFTPHPTHFNIDEALEVIEELKPRQAFLTHLGHDID 256 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSP 269 + V S P V A+DG++ P Sbjct: 257 HGPVEASLPDHVHLAYDGLRLPMP 280 >gi|254500610|ref|ZP_05112761.1| hypothetical protein SADFL11_646 [Labrenzia alexandrii DFL-11] gi|222436681|gb|EEE43360.1| hypothetical protein SADFL11_646 [Labrenzia alexandrii DFL-11] Length = 239 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 54 TTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 TTV++DTGPD Q+L V +DAVLYTH HADH+HGID LR + ++ +R I VY Sbjct: 10 TTVLIDTGPDLRDQLLGANVQRMDAVLYTHAHADHLHGIDDLRAFMVRDRRRIPVYMDIA 69 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 +F YCF+ +YPPI++ + P+ ++ GG IE +P+ HG I++ Sbjct: 70 TFDKAMAAFGYCFETPKGSSYPPILDRHAMTAG-TPVVIEGPGGAIEFLPVEVTHGEINA 128 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPK 233 LGFR GN AY DV+ ES + L LD LI+D L+ H SHF+L ++L + + PK Sbjct: 129 LGFRIGNTAYVPDVSDISRESFDLLTGLDLLILDCLRRNPHPSHFNLDDALSWTKDLAPK 188 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 +AI T++H DLDY+ + P + PAFDG+Q Sbjct: 189 HAIFTNLHNDLDYETLKAELPDGIEPAFDGLQ 220 >gi|332043586|gb|EGI79781.1| metallo-beta-lactamase domain-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 264 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 100/258 (38%), Positives = 138/258 (53%), Gaps = 13/258 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C NPK++R R S+ +S T ++D GPDF Q Sbjct: 15 TFLGTGTSQGIPVIGSTHPVCLSDNPKDKRLRVSVLVS-----WDTYTFVIDCGPDFRQQ 69 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR ID V++TH HADH G+D +R +F +Q ID+YA + L + F Y F Sbjct: 70 MLRANCNKIDGVIFTHEHADHTAGLDDIRPFFFRQG-DIDIYAHKRVLGELQKRFAYIFT 128 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP + N I E + P +K+ I IPI H ++ G+RF + AY TD+ Sbjct: 129 TKD--KYPGVPNVIEHEIKNTPFKLKN----INMIPIEGYHHKLQVFGYRFKDFAYLTDM 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 + LEKL NLD L+I+AL+ H SHF+L E+L I+ + PK A LTH+ L + Sbjct: 183 KTIAEKELEKLYNLDVLVINALREEAHISHFNLDEALSIIDRVKPKKAYLTHISHYLGFH 242 Query: 247 DMVLKSTPSRVVPAFDGM 264 D V K P V A+D + Sbjct: 243 DEVEKKLPENVFLAYDEL 260 >gi|327540508|gb|EGF27090.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47] Length = 283 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 148/264 (56%), Gaps = 15/264 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S+GVP I + C T+P N RTR S+ I R +++DT PD Q+L Sbjct: 28 LGTGTSVGVPAIGCECDVCQSTDPHNNRTRCSILI-----RLPEGNLLIDTPPDLRTQLL 82 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE++ + AVL+TH HADHI+G+D LR + + RP+ +Y D + S+ Y F Sbjct: 83 REKIKLVHAVLFTHEHADHIYGLDDLRLFPFRLGRPVPLYCRADVEARIRTSYDYAFSQ- 141 Query: 130 DDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCT 185 ++T+ P + + I N+D + G + P+ +HG LGFR G+ AYCT Sbjct: 142 REQTHAGSRPQLEILSINNDD---SFEVLG--VHVTPVPLKHGPHFEVLGFRMGDFAYCT 196 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D N S+++L+ LD L++DAL+ H +HF++ E+L+ IE + P+ A LTH+ D+D Sbjct: 197 DTNHISETSMDRLRGLDTLVLDALRFTPHPTHFNIDEALEVIEELKPRQAFLTHLGHDID 256 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSP 269 + V S P V A+DG++ P Sbjct: 257 HGPVEASLPDHVHLAYDGLRLPMP 280 >gi|103486747|ref|YP_616308.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] gi|98976824|gb|ABF52975.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] Length = 254 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 142/261 (54%), Gaps = 18/261 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG S GVPRI DWG CDP NP+N R+R+S+ +S R ++VDT PD MQ+ Sbjct: 5 ILGCGTSSGVPRIGNDWGQCDPDNPRNLRSRASILVSLGGFR-----ILVDTSPDMRMQL 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L +V +DAV++TH HADH HG+D LR ++ + YA + L F Y F Sbjct: 60 LDARVGEVDAVIWTHEHADHTHGLDDLRQIMHRRGAAVPCYARHHVLDILKWRFTYAFAG 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYC 184 + YP V+PI + ++ + G +E I HG I + G F + +AY Sbjct: 120 --NAGYPASVDPIDLLDH-------QSIGPVEVSAIEMPHGPIKASGLIFSDGAHRIAYA 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + F E ++ Q +D +IDAL+ H +H L+ +L+ + + AI+THM + Sbjct: 171 TDFSRFTDEMVDFFQGVDLFVIDALRRYPHPTHPHLAMTLEGLAKVGHPRAIITHMDNTM 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQ 265 DY ++ PS V P +DG++ Sbjct: 231 DYADLVAELPSGVEPGYDGLE 251 >gi|224824704|ref|ZP_03697811.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] gi|224603197|gb|EEG09373.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] Length = 258 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 12/264 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG+S G P I D C +P+NRR+R+S + R +T ++DTGPD Sbjct: 6 LTVLGCGSSSGTPAIGCDCPTCTSPDPRNRRSRASAYL-----RVGDTAFLIDTGPDLRH 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE + +DAVLYTHPHADH++GID LR + +K I ++ + ++ F Y Sbjct: 61 QALREGITRVDAVLYTHPHADHLNGIDDLRAFCYVKKGAITLFGNSFTLANVRSRFDYAL 120 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 A P V+ +V G + IP++ HG LG+R G+VA+ TD Sbjct: 121 HAPSKAWDKP-----VLLTEEVGGPFGFGGVTVTPIPLM--HGSWPCLGWRIGDVAWLTD 173 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ P SLEKLQ L+ L +D L+ + SH +++SL+ E I + IL HM L+Y Sbjct: 174 LSDIPEHSLEKLQGLEVLFLDCLRREPYPSHLCVADSLRWAERIGARRTILIHMTHGLEY 233 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPI 270 + P V +DG++ S P+ Sbjct: 234 HALSAECPPGVEVGYDGLKVSVPL 257 >gi|325279424|ref|YP_004251966.1| beta-lactamase domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311233|gb|ADY31786.1| beta-lactamase domain protein [Odoribacter splanchnicus DSM 20712] Length = 263 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/266 (36%), Positives = 146/266 (54%), Gaps = 17/266 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S G+P I D C +P ++R R+S + ++ +I+D GPDF Sbjct: 3 LTILGSGTSQGIPVIACDCPVCRSADPHDKRLRASAMLDIKGKK-----IIIDAGPDFRY 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LR QV + A+L TH H DHI G+D +R + ++ +DVY + +++ F Y F Sbjct: 58 QMLRSQVKDLRAILLTHGHKDHIGGLDDVRAFNWVKQGAVDVYGNEGTREVVYKDFSYAF 117 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 A YP P +N VI +D P + I+ +PI H ++ LGFR GN AY Sbjct: 118 AAF---RYPGVPEINYHVI--DDRPFYIDD----IQVVPIPVLHYKMPVLGFRIGNFAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD PA S+E+L+ +++L+I+AL+ LH SHF+L E+L I I PK+A LTH+ + Sbjct: 169 TDAKTIPASSMERLKGVEYLVINALRKELHMSHFNLEEALTMIARIQPKSAFLTHIGHQM 228 Query: 245 DYDM-VLKSTPSRVVPAFDGMQFSSP 269 V K P +V A+D ++ P Sbjct: 229 GLSAEVSKELPVQVKLAYDTLEIEIP 254 >gi|322436418|ref|YP_004218630.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] gi|321164145|gb|ADW69850.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] Length = 266 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/265 (37%), Positives = 142/265 (53%), Gaps = 13/265 (4%) Query: 7 FTILGCGASLGVPRITGDWGAC-DPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G S+GVP + C D P +NRRTR SL++ TV++DTGPD Sbjct: 1 MTFLGSGTSMGVPTLGCPCAVCADARIPGSRNRRTRPSLRLE-----WEGHTVLIDTGPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F+ Q +RE + +DAV YTH HADHI G+D LR + P+ +YA L F Sbjct: 56 FHAQAIRENISRVDAVFYTHHHADHILGMDDLRPLSFRNTTPLPLYADDPTADALERVFG 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVP-ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ + YP + + P + G + IP++ HGR G+RFG+ A Sbjct: 116 YTFRT--ENRYPTSARVQIHRLDPTPGSTTRIFGANFQRIPVI--HGRERITGYRFGSAA 171 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD++ P ESL LQ LD LI+DAL+ H SH +++S+ +E + PK A THM Sbjct: 172 YLTDMSDIPPESLALLQGLDILILDALRPAPHPSHSHVAKSIAFVEQLKPKRAYFTHMGH 231 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFS 267 +LD++ + P + A+DG+Q + Sbjct: 232 ELDHNATEATLPQGIHLAYDGLQLT 256 >gi|299136493|ref|ZP_07029676.1| beta-lactamase-like protein [Acidobacterium sp. MP5ACTX8] gi|298601008|gb|EFI57163.1| beta-lactamase-like protein [Acidobacterium sp. MP5ACTX8] Length = 267 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 21/273 (7%) Query: 7 FTILGCGASLGVPRITGDWGACD----PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G S+GVP + C+ P +P NRRTR S++ VS G N V+VDTGP Sbjct: 5 LTFLGSGTSMGVPTLGCGCAVCNSALIPGSP-NRRTRPSIQ---VSYGGHN--VLVDTGP 58 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF+ Q + E + S+DAVLYTH HADHI G+D LR I +YA D + + F Sbjct: 59 DFHAQAISEGIRSVDAVLYTHSHADHILGMDDLRPLSFATPEGIALYADDDTAQVIERVF 118 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRF 178 Y F+ +D YP ++ + + +A G +P++ HGR G+RF Sbjct: 119 EYTFRKVD--RYPTSAR---VQIHRLGTATGTAVDLFGARFVRVPVI--HGRNIIAGYRF 171 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G+ AY TD++ PAESL L+ LD LI+DAL+ H SH L+ S++ +E I P+ A T Sbjct: 172 GSAAYLTDMSDIPAESLPLLEGLDILILDALRREPHPSHSHLARSIELVEKIAPRRAFFT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 H+ DLD++ S P + A DG++ IP Sbjct: 232 HISHDLDHESTNASLPDHIRLAHDGLKLDFEIP 264 >gi|159896849|ref|YP_001543096.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889888|gb|ABX02968.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 255 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 139/258 (53%), Gaps = 11/258 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG S+GVP + D C T P+N+RTR++ I + TT+++D GPD + Sbjct: 3 LTILGCGGSMGVPMLACDCVVCTSTEPRNQRTRTAALI-----QSPTTTILIDPGPDLRL 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LR + +DAVL THPH DHI GID LR + L +R + +YA + + + Y F Sbjct: 58 QGLRHNLQQLDAVLVTHPHQDHIGGIDDLRPFTLHTQRMLPLYANQFTLDRIRYQYDYAF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + + P + +++ + + I G + IP+ HG LGFR G++ Y TD Sbjct: 118 ASGESASTRPSLGLNLLDGSALQI------GDVPIIPLPIDHGDWQILGFRIGDLTYMTD 171 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P + E L + LII AL++ H HF++ ++L + I P+ A HM LDY Sbjct: 172 VSHIPEPTFEMLHGVKSLIIGALRHEPHPLHFTVEQALAAVARIQPEQAFFVHMSHSLDY 231 Query: 247 DMVLKSTPSRVVPAFDGM 264 + + P V A+DG+ Sbjct: 232 NTEHATLPKHVQLAYDGL 249 >gi|78221985|ref|YP_383732.1| Beta-lactamase-like [Geobacter metallireducens GS-15] gi|78193240|gb|ABB31007.1| Beta-lactamase-like protein [Geobacter metallireducens GS-15] Length = 264 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 145/261 (55%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP + C ++PK++RTRSS+ I + ++VDT PD Sbjct: 16 ITILGSGTSTGVPMVGCHCPVCSSSDPKDKRTRSSIMIET-----AGKYILVDTSPDLRR 70 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LR+++ IDAVL THPHADHI+GID LRG+ +R I + + M+ + +F Y F Sbjct: 71 QALRQRIPYIDAVLLTHPHADHINGIDDLRGFHFIHRRVIPCHGSRTTMEAVQRNFSYIF 130 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + L+ Y P++ ++ N + +S +PI HG + + G+R AY TD Sbjct: 131 RGLEVVGYSPLMEAHIV-NEPFALFGQS------IVPIHLYHGAMPATGYRIDGAAYLTD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P SL L LD LI+DAL+ H +HF++ +L+ +E + PK AILTH+ ++ + Sbjct: 184 CSRIPDSSLSLLTGLDILIMDALRYTPHENHFNIEGALRIVEQLKPKRAILTHLTHEVAH 243 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + P V A+DGM+ + Sbjct: 244 GDESR-LPEGVEFAYDGMEIA 263 >gi|51598784|ref|YP_072972.1| phnP protein [Borrelia garinii PBi] gi|51573355|gb|AAU07380.1| phnP protein [Borrelia garinii PBi] Length = 253 Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/260 (37%), Positives = 147/260 (56%), Gaps = 15/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C + KN+R RSS LK+S S+ +++DTGPD Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLS------SDIKLLIDTGPDIR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + Sbjct: 58 QQLLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMAHIMNAFPHN 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + + P VI + + PI K +E +PI HG I SLG+R GN+AY T Sbjct: 116 FSSKPSLSGKANIIPNVIRDFE-PIFFKG----LEIVPIPLIHGEIVSLGYRIGNLAYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P ES + L+NLD LIIDA++ H +H + SE++ ++ INPK + TH+ D+ Sbjct: 171 DVKFIPEESYDYLKNLDLLIIDAIRIKSHPAHLNFSEAICEVRKINPKISYFTHIAHDIM 230 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + A+DG++ Sbjct: 231 HEEFDYLEKDNIYLAYDGLK 250 >gi|219685119|ref|ZP_03539939.1| PhnP protein [Borrelia garinii Far04] gi|219673215|gb|EED30234.1| PhnP protein [Borrelia garinii Far04] Length = 253 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 147/260 (56%), Gaps = 15/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C + KN+R RSS LK+S S +++DTGPD Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLS------SGIKLLIDTGPDIR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + Sbjct: 58 QQLLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMVHIMNAFSHN 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY T Sbjct: 116 FSSKPSLSGKANIIPNVIRDFE-PIFFKD----LKIVPIPLIHGEIVSLGYRIGNLAYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV + P ES L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ Sbjct: 171 DVKSIPEESYNYLKNLDLLIIDAIRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIM 230 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + A+DG++ Sbjct: 231 HEEFDYLEKENIYLAYDGLK 250 >gi|124515723|gb|EAY57232.1| putative metallo-beta-lactamase family protein [Leptospirillum rubarum] Length = 262 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 11/260 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G GAS GVP I D C ++PKN RTRSS+ + R ++VDT PD +Q L Sbjct: 6 MGTGASTGVPMIGCDCSVCQSSDPKNERTRSSIMV-----RVDGKNILVDTSPDLRIQSL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + + IDAV++THPHADHI GID LR + QK I V+A P+ + + + F Y F Sbjct: 61 KNHIKRIDAVIFTHPHADHILGIDELRTFNFWQKEEIPVFADPETLGTVMKMFPYAFS-- 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + + P + ++ MK I+ P +HG + + R ++ Y TD N Sbjct: 119 -EENRGGLTRP-RLAPREIVGAMKI--NEIQVTPFPVKHGPVYNHALRLDDLVYLTDCNE 174 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 E +E ++ +D LII A+ H+SHF + ++L IE + P+ A LTH+ +DY+ + Sbjct: 175 VSDEGMEVMKGVDTLIIGAVLYEPHASHFGIWQALDLIERVQPRQAFLTHLSHRIDYNEL 234 Query: 250 LKSTPSRVVPAFDGMQFSSP 269 PS V AFDG+ S P Sbjct: 235 TTRLPSGVQAAFDGLTVSLP 254 >gi|219684455|ref|ZP_03539399.1| PhnP protein [Borrelia garinii PBr] gi|219672444|gb|EED29497.1| PhnP protein [Borrelia garinii PBr] Length = 253 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 147/260 (56%), Gaps = 15/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C + KN+R RSS LK+S S +++DTGPD Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLS------SGIKLLIDTGPDIR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + Sbjct: 58 QQLLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMVHIMNAFSHN 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY T Sbjct: 116 FSSKPSLSGKANIIPNVIRDFE-PIFFKD----LKIVPIPLIHGEIVSLGYRIGNLAYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV + P ES L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ Sbjct: 171 DVKSIPEESYNYLKNLDLLIIDAIRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIM 230 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + A+DG++ Sbjct: 231 HEEFDYLEKDNIYLAYDGLK 250 >gi|111115359|ref|YP_709977.1| phnP protein [Borrelia afzelii PKo] gi|216263557|ref|ZP_03435552.1| PhnP protein [Borrelia afzelii ACA-1] gi|110890633|gb|ABH01801.1| phnP protein [Borrelia afzelii PKo] gi|215980401|gb|EEC21222.1| PhnP protein [Borrelia afzelii ACA-1] Length = 253 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 146/260 (56%), Gaps = 15/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C + KN+R RSS LK+S SN +++DTGPD Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKVS------SNIKLLIDTGPDIR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE + +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + Sbjct: 58 QQLLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTRSAPLNIYARDTAMAHIMNAFSHN 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY T Sbjct: 116 FSSKPSVSGKADIIPNVIRDFE-PIFFKG----LKIVPIPLIHGEIVSLGYRIGNLAYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ Sbjct: 171 DVKFIPEVSYDYLKNLDLLIIDAMRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIM 230 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + A+DG++ Sbjct: 231 HEEFDYLEKDNIYLAYDGLK 250 >gi|226941610|ref|YP_002796684.1| hydrolase protein [Laribacter hongkongensis HLHK9] gi|226716537|gb|ACO75675.1| probable hydrolase protein [Laribacter hongkongensis HLHK9] Length = 257 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/263 (39%), Positives = 145/263 (55%), Gaps = 16/263 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S G P I C +PKNRRTR+S S VS G + +++DTGPD Q Sbjct: 6 TILGCGSSSGTPAIGCQCPTCTSDDPKNRRTRAS---SLVSVDGVH--LLIDTGPDLRQQ 60 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE++ +DAVLYTHPHADH++GID LR + +K PI +Y + ++ E F YC Sbjct: 61 ALRERLTRVDAVLYTHPHADHLNGIDDLRAFCYLKKGPITLYGNRFMLDNIRERFGYCL- 119 Query: 128 ALDDRTYPP---IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 PP P++ VP A GV + P+ +HGR LG+R G +AY Sbjct: 120 ------LPPGQFWDKPVLHLEEAVPGVELEAAGV-KVEPVAVEHGRWQILGWRIGRMAYL 172 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV+ P S +L+ LD L++D LK + SHF + ++L I + +L HM +L Sbjct: 173 TDVSCIPEASFARLEGLDLLLLDCLKYASYPSHFGVEQALAAAARIGARRTVLIHMTHEL 232 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 +Y + P V P FDGM+ + Sbjct: 233 EYHTLAAQCPPGVEPGFDGMRLT 255 >gi|148259918|ref|YP_001234045.1| beta-lactamase domain-containing protein [Acidiphilium cryptum JF-5] gi|326403128|ref|YP_004283209.1| hypothetical protein ACMV_09800 [Acidiphilium multivorum AIU301] gi|146401599|gb|ABQ30126.1| beta-lactamase domain protein [Acidiphilium cryptum JF-5] gi|325049989|dbj|BAJ80327.1| hypothetical protein ACMV_09800 [Acidiphilium multivorum AIU301] Length = 267 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 14/273 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGA-----CDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 + T+LG G S G+P+I G G CDP P+NRRTR+S+ S ++VD Sbjct: 3 FTLTLLGTGGSAGLPQIGGPDGGGDWGQCDPAEPRNRRTRASVVFSA----ADGQRILVD 58 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T P+ +Q+ ++ IDAV+ THPHADHI G+D +R + PID Y L Sbjct: 59 TAPEIRLQLTDNRIDRIDAVIITHPHADHIAGLDDIRILNRLRGTPIDAYTDERTWAELR 118 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F Y F+ + P P++ + +P ++ G+ I Q HG I SLG R G Sbjct: 119 QRFDYAFRPWEP---PGFFRPVLRTHTILPGETRTIAGLPVRF-IRQDHGFIPSLGLRVG 174 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILT 238 NVAYC DV F + L+ +D IID + G H +H L + ++ + P+ ILT Sbjct: 175 NVAYCPDVVRFTPDQFALLEGVDTWIIDCFTRRGPHPTHAHLDQVIEWATALRPRRTILT 234 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 HM +D+DY + + P+ PAFDGM P Sbjct: 235 HMGLDMDYRTLCDTLPAGFEPAFDGMIIEGDAP 267 >gi|296116329|ref|ZP_06834945.1| beta-lactamase domain protein [Gluconacetobacter hansenii ATCC 23769] gi|295977148|gb|EFG83910.1| beta-lactamase domain protein [Gluconacetobacter hansenii ATCC 23769] Length = 254 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 11/259 (4%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 GC S G GDWG CDP P+N R RSS+ + + ++VDTGPD Q+L Sbjct: 6 GCQWSAGWTG-QGDWGLCDPCEPRNARLRSSVLL----RDDTGNALLVDTGPDLRAQLLA 60 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 +++ +DAVLYTH HADHI G+D LR RPI Y D + L F Y F+ Sbjct: 61 QRITRVDAVLYTHAHADHIAGLDELRAINRIIGRPIPAYGTRDVIDELVTRFDYVFRPWT 120 Query: 131 DRT-YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + Y P++ P VIE + V Q HG +LG R G +AYCTDV Sbjct: 121 PPSFYRPVLTPHVIEAGGEAMIAGMNVHVFR-----QVHGHTLTLGLRVGPMAYCTDVAE 175 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 +L+ L +D ++ + H SH L + E I P+ +LTHM D+D+D + Sbjct: 176 LDDTALDILHGVDTWVVGCFQRTTHVSHGWLERVFEWRERIRPRRTVLTHMGPDMDWDWM 235 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + P+ V A+DG+ + Sbjct: 236 QRHLPAGVEAAYDGLTLRT 254 >gi|187735380|ref|YP_001877492.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425432|gb|ACD04711.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 261 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 16/273 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + LG G S GVP+I C +P+NRR RSS+ + + T +++D+ Sbjct: 1 MTSVMNILFLGTGTSTGVPQIGCSCAVCTSPDPRNRRLRSSIYVE-----AAGTRLLLDS 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q LRE + +DAVLYTH H DH+ G D LR + ++ + +YA+P + L Sbjct: 56 SPDLRQQALRENITDVDAVLYTHAHVDHVGGFDDLRAFCWRRSGGLPMYASPMTVDALRT 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL----QQHGRISSLGF 176 + + F R+ V P E ++V + + +P+L + + + G Sbjct: 116 MYGWAFVPKPGRSG--YVRP---EPHEVTAPFRVGNMLATPLPVLHAGVETYAYLLEAGG 170 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R ++ Y DV + PA SLE+++ +D LIID L+ LH +H L E+L I + P+ A+ Sbjct: 171 R--SLVYMPDVKSIPAPSLERMKGVDLLIIDGLRYHLHPTHMCLEETLAAIAAVRPRRAV 228 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 LTH+ D+DY ++ P V+PA+DG++ S P Sbjct: 229 LTHLSHDMDYGILSGKLPENVMPAYDGLRLSLP 261 >gi|197116732|ref|YP_002137159.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197086092|gb|ACH37363.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 251 Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 142/257 (55%), Gaps = 13/257 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G S GVP + C T+P+++RTR+S+ + +R ++VDT D Q Sbjct: 4 TILGSGTSTGVPMVGCHCQVCGSTDPRDKRTRASILVESCGQR-----ILVDTSTDLRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + +DAVL+TH HADHIHGID LRG++ +R I Y +P M+ + F Y F Sbjct: 59 ALREGIPHVDAVLFTHTHADHIHGIDDLRGFYFIHRRIIPCYGSPGTMQSATDKFAYIFD 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L Y P++ P +E+ P + +P+ +HG + G+RF N AY TD Sbjct: 119 GLTSEGYSPLLEPFPVED---PFELFGC----RVVPVPIKHGSFDATGYRFDNAAYLTDC 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P SL L+ L+ LIIDAL+ H +HF++ +L+ + + P+ + TH+ ++ + Sbjct: 172 SEIPEGSLPLLEGLELLIIDALRFSPHPNHFNIEGALQMAQKLRPRRTLFTHLTHEVRHS 231 Query: 248 MVLKSTPSRVVPAFDGM 264 + P+ V A+DGM Sbjct: 232 DGSR-LPAGVEFAYDGM 247 >gi|77917815|ref|YP_355630.1| phosphonate metabolism [Pelobacter carbinolicus DSM 2380] gi|77543898|gb|ABA87460.1| phosphonate metabolism [Pelobacter carbinolicus DSM 2380] Length = 286 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 139/259 (53%), Gaps = 12/259 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + + C ++P++RRTR S IS + +++DTG D + Q Sbjct: 11 LLGTGTSTGVPMLGCNCDVCRSSDPRDRRTRCSALISWGAR-----NILIDTGTDLHQQA 65 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + +D VLYTH HADH+HGID LR + + K I ++ +P M + +F Y F Sbjct: 66 LRESLTHVDGVLYTHAHADHVHGIDDLRAFNMVSKESIPIFGSPATMSVIRRNFSYIFDT 125 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + P ++P DV G +E P+ QHG + G+R G AY TD N Sbjct: 126 QGGVGFRPRLDPW-----DVRGPFSLFGLPVE--PVAMQHGPGEASGYRIGPFAYLTDCN 178 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P SLE L+ L+ L++D L+ H +HFS+ E++K + + + +LTH+ ++ + Sbjct: 179 VIPEASLEHLRGLEVLVLDGLRFRSHPTHFSIDEAIKLAQRLGARRTLLTHICHEVSHAR 238 Query: 249 VLKSTPSRVVPAFDGMQFS 267 + P + A+DG +FS Sbjct: 239 DSRDLPPGIELAYDGQRFS 257 >gi|296284130|ref|ZP_06862128.1| metal-dependent hydrolase [Citromicrobium bathyomarinum JL354] Length = 255 Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 17/265 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVPRI GDWGACDP+ P+NRRTR S+ V E + ++VDT PD Q Sbjct: 4 TLLGSGTSTGVPRINGDWGACDPSEPRNRRTRVSI----VVENDAGARLLVDTPPDLRDQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LR ++ ++D V +TH HADH HGID LR + PI Y + ++ L F Y F Sbjct: 60 FLRNKITNVDGVFWTHDHADHCHGIDDLRALRYGRSGPIPGYGVEETVRRLKARFSYVFA 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAY 183 + YP IV V++ ++ G ++ HG S G+RFG ++ Y Sbjct: 120 G--EHGYPTIVKLEVLDR------LRLFAGFTVNWCVM-PHGPAKSTGYRFGCDDKSIGY 170 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD + +E + + +D L+ D L+ H +H +L+ +L+ + +LTH+ Sbjct: 171 ATDFSEITSEMVTLFKGVDLLVCDCLRREEHPTHANLAMALELGKRCKVGKIVLTHLDKS 230 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + P+ V +DGM ++ Sbjct: 231 MDYKTLSGEVPAGVQVGYDGMVVAA 255 >gi|188584792|ref|YP_001916337.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349479|gb|ACB83749.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 253 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 138/257 (53%), Gaps = 12/257 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C + KN R RSS+ I + N +++DT P+F +Q Sbjct: 4 TFLGTGPSHGVPVIGCSCSVCSSKDSKNTRYRSSVII-----KYENNHLLIDTPPEFRLQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ + ID VL+THPHADH+HG D LR + Q+ I +A+ + +K+L + Y F+ Sbjct: 59 MINNNIHRIDGVLFTHPHADHVHGFDDLRRFNEIQRESIPCFASSETVKNLKNMYSYVFR 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D T P V I ++ + G I IPI HG+ LG+R G AY TD Sbjct: 119 GGDPYTSSPKVTLHSISSS-----FELNGLTINPIPIY--HGKSLILGYRIGRFAYLTDC 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P +S + LQ L L+I AL+ H +H S+ E+++ + INP+ A THM DLDY Sbjct: 172 SQIPPDSYKFLQGLHTLVIGALRYRSHPNHLSVDEAVETVNKINPEVAYFTHMTHDLDYY 231 Query: 248 MVLKSTPSRVVPAFDGM 264 + + P + PAFD + Sbjct: 232 QLNEQLPVNIKPAFDNL 248 >gi|241761927|ref|ZP_04760012.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373607|gb|EER63179.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 254 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 131/260 (50%), Gaps = 18/260 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP I +WG CDP PKN RTR+SL + T ++VDT PD Q+ Sbjct: 5 LLGSGTSSGVPIIGNNWGTCDPNEPKNNRTRASLYLET-----DQTKILVDTSPDMRTQL 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR + +DAVL+TH HADH HGID LR F ++ PI +A P+ + L + F Y F Sbjct: 60 LRADISILDAVLWTHDHADHCHGIDDLRPIFHRRGEPIPGFARPETLSGLKQRFSYVFDG 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYC 184 D Y P V V+ +N G +E Q H RI+S GF F + V Y Sbjct: 120 YGD--YRPTVEANVLPDN-------LTIGDVEISVTDQPHARITSAGFCFRHKNIRVGYA 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N E + Q +D I+D L+ H SH L+ L+ E + K A+ HM + Sbjct: 171 TDFNNITDEMAKLYQGVDLWIVDTLRERPHPSHPHLAMILEWAEKLQVKKAVTCHMDNSM 230 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY + + P + +DG Sbjct: 231 DYATLSQKLPHYMEVGYDGW 250 >gi|206602227|gb|EDZ38709.1| Putative metallo-beta-lactamase family protein [Leptospirillum sp. Group II '5-way CG'] Length = 262 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 137/267 (51%), Gaps = 25/267 (9%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G GAS GVP I D C +PKN RTRSS+ + R ++VDT PD +Q L Sbjct: 6 MGTGASTGVPMIGCDCPVCQSLDPKNERTRSSILV-----RVDGKNILVDTSPDLRIQSL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + + IDAV++THPHADHI GID LR + QK I V+A P+ + + + F Y F Sbjct: 61 KNHIKRIDAVIFTHPHADHILGIDELRTFNFWQKEEIPVFADPETLGTVMKMFPYAFSEE 120 Query: 130 DD------RTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + R P IV I I I+ P +HG + + R ++ Sbjct: 121 NRGGLTRPRLAPREIVGSIKIHE-------------IQVTPFPVKHGPVYNHALRLDDLV 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD N E +E ++ +D LII A+ H+SHF + ++L IE + P+ A LTH+ Sbjct: 168 YLTDCNEVSDEGMEVMKGVDTLIIGAVLYEPHASHFGIWQALDLIERVQPRQAFLTHLSH 227 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 +DY+ + PS V AFDG+ S P Sbjct: 228 RIDYNELTTRLPSGVQAAFDGLMVSLP 254 >gi|56551990|ref|YP_162829.1| beta-lactamase domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|260752467|ref|YP_003225360.1| beta-lactamase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543564|gb|AAV89718.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258551830|gb|ACV74776.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 254 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/260 (37%), Positives = 131/260 (50%), Gaps = 18/260 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP I +WG CDP PKN RTR+SL + T ++VDT PD Q+ Sbjct: 5 LLGSGTSSGVPIIGNNWGTCDPNEPKNNRTRASLYLET-----DQTKILVDTSPDMRTQL 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR + +DAVL+TH HADH HGID LR F ++ PI +A P+ + L + F Y F Sbjct: 60 LRADISILDAVLWTHDHADHCHGIDDLRPIFHRRGEPIPGFARPETLSGLKQRFSYVFDG 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYC 184 D Y P V V+ +N G +E Q H RI+S GF F + V Y Sbjct: 120 YGD--YRPTVEANVLPDN-------LTIGDVEISVTDQPHARITSAGFCFRHKNIRVGYA 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N E + Q +D I+D L+ H SH L+ L+ E + K A+ HM + Sbjct: 171 TDFNNITDEMAKLYQGVDLWIVDTLRERPHPSHPHLAMILEWAEKLQVKRAVTCHMDNSM 230 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 DY + + P + +DG Sbjct: 231 DYATLSQKLPHYMEVGYDGW 250 >gi|150025171|ref|YP_001295997.1| PhnP protein [Flavobacterium psychrophilum JIP02/86] gi|149771712|emb|CAL43186.1| PhnP protein [Flavobacterium psychrophilum JIP02/86] Length = 254 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 16/265 (6%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK Y+ LG G S G+P I + C + K++R R S+ + N + ++D Sbjct: 1 MKVYF----LGTGTSQGIPVIGSNHPVCHSQDKKDKRLRVSIWV-----EWDNNSFVIDC 51 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L IDA+L+TH H+DH G+D +R +F KQ I +YA +K+L + Sbjct: 52 GPDFRQQMLASGCSKIDAILFTHEHSDHTAGLDDIRPFFFKQG-DIPIYAHERVLKNLEK 110 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F+ + P V PI +ENN V I + S + IPI HG + G+RF Sbjct: 111 RFDYIFETENKYPGSPGVFPIEVENN-VAIDIDSK----KIIPINAIHGGLQVFGYRFDA 165 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TDV + KL+NL+ L+I+AL+ LH++HF+L E+L I ++ PK A LTH+ Sbjct: 166 FAYLTDVKTIEPAEINKLKNLEVLVINALREELHNTHFNLQEALDFIAIVQPKKAYLTHI 225 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGM 264 H + V K P V A+D + Sbjct: 226 GHTFGFHQEVQKKLPKNVFLAYDNL 250 >gi|198283235|ref|YP_002219556.1| beta-lactamase domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665996|ref|YP_002425467.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247756|gb|ACH83349.1| beta-lactamase domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518209|gb|ACK78795.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 252 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/256 (38%), Positives = 134/256 (52%), Gaps = 14/256 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G+S G P I C +P+N R R+S+ + R ++VDTGPD Q+L Sbjct: 6 LGTGSSAGTPVIACHCPVCCSDDPRNHRLRASILV-----RDEGVDLLVDTGPDLRQQML 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R V S+ AVLYTH HADHI+G+D LR + Q+ I YA L FRYCF Sbjct: 61 RAGVQSLTAVLYTHFHADHINGVDDLRAFNFAQEVVIPCYADERTAAELESRFRYCFLPP 120 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 D P ++ I + ++ GGV + IP+L HG + LG+RF +VAY TD+ Sbjct: 121 DPAWAKPSLSMHRI------VSPQTFGGVRVTPIPVL--HGDLPILGYRFNDVAYLTDLK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P SLE L+ L L++D L+ H +H + E+ I + ILTHM D+DY Sbjct: 173 TIPDASLELLRGLKVLVLDCLRYEYHPTHLHVEEARYWARRIGAERTILTHMTHDVDYAT 232 Query: 249 VLKSTPSRVVPAFDGM 264 + P V+PA DGM Sbjct: 233 LAAELPEGVIPASDGM 248 >gi|224532233|ref|ZP_03672865.1| PhnP protein [Borrelia valaisiana VS116] gi|224511698|gb|EEF82104.1| PhnP protein [Borrelia valaisiana VS116] Length = 253 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/258 (37%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + R+S S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCASSFSKNKRLRSSFFL-RLS---SGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRDVPLNIYARDTTMVHIMNAFSHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + V P VI + + PI K ++ IPI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSVSGKADVIPNVIRDFE-PIFFKG----LKIIPIPLIHGEIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAVCEVKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFEYLEKDNIYLAYDGLK 250 >gi|224534735|ref|ZP_03675307.1| PhnP protein [Borrelia spielmanii A14S] gi|224513983|gb|EEF84305.1| PhnP protein [Borrelia spielmanii A14S] Length = 254 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 145/260 (55%), Gaps = 14/260 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C + KN+R RSS LK+S SN +++DTGPD Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFRKNKRLRSSFFLKVS-----SSNIKLLIDTGPDIR 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE + +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + Sbjct: 59 QQLLRENIDRLDLVLYTHEHYDHIMGFDDIK--FYTRSAPLNIYARETTMVHIMNAFSHN 116 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + + P VI++ + P K ++ +PI HG SLG+R GN+AY T Sbjct: 117 FSSKPSVSGKADIIPNVIKDFE-PFFFKD----LKIMPIPLIHGETVSLGYRIGNLAYLT 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ Sbjct: 172 DVKFIPEASYDYLKNLDLLIIDAIRTKPHPAHLNFSEAVCEVKKINPKISYFTHIAHDIM 231 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + A+DG++ Sbjct: 232 HEEFDYLEKDNIYLAYDGLK 251 >gi|89890728|ref|ZP_01202237.1| metal-dependent hydrolase, beta-lactamase family [Flavobacteria bacterium BBFL7] gi|89516873|gb|EAS19531.1| metal-dependent hydrolase, beta-lactamase family [Flavobacteria bacterium BBFL7] Length = 253 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G S G+P I D C T+ +++R R S I +R +++D GPDF Q Sbjct: 4 TILGTGTSQGIPVIGSDHPVCRSTDSRDKRLRVSAMIEHQGKR-----LVIDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR QV +DAVL+TH HADH G+D LR +F +Q I+ Y L E F Y F Sbjct: 59 MLRHQVNHLDAVLFTHEHADHTAGLDDLRPFFFRQGE-INCYMTKRVHLALQERFSYMFA 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ YP + + V E +D K +G IE P+L HG I GFR N AY TDV Sbjct: 118 TVN--KYPGVADLTVHEFDDH--AFKVSG--IEVTPVLADHGFIPVHGFRVLNFAYMTDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 A KL+NLD L+++ L+ H +H +L E+L + + PK TH+ L + Sbjct: 172 KTINATEKHKLKNLDVLVLNMLREQEHKTHLNLDEALDLVRELQPKRTYFTHISHHLGFH 231 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V K+ P V A+D ++ + Sbjct: 232 EEVEKNLPEGVYLAYDNLEIN 252 >gi|216264353|ref|ZP_03436345.1| PhnP protein [Borrelia burgdorferi 156a] gi|221218155|ref|ZP_03589621.1| PhnP protein [Borrelia burgdorferi 72a] gi|223888720|ref|ZP_03623311.1| PhnP protein [Borrelia burgdorferi 64b] gi|224532740|ref|ZP_03673357.1| PhnP protein [Borrelia burgdorferi WI91-23] gi|224533547|ref|ZP_03674136.1| PhnP protein [Borrelia burgdorferi CA-11.2a] gi|225548663|ref|ZP_03769710.1| PhnP protein [Borrelia burgdorferi 94a] gi|225549522|ref|ZP_03770488.1| PhnP protein [Borrelia burgdorferi 118a] gi|215980826|gb|EEC21633.1| PhnP protein [Borrelia burgdorferi 156a] gi|221192103|gb|EEE18324.1| PhnP protein [Borrelia burgdorferi 72a] gi|223885536|gb|EEF56635.1| PhnP protein [Borrelia burgdorferi 64b] gi|224512358|gb|EEF82742.1| PhnP protein [Borrelia burgdorferi WI91-23] gi|224513220|gb|EEF83582.1| PhnP protein [Borrelia burgdorferi CA-11.2a] gi|225369799|gb|EEG99246.1| PhnP protein [Borrelia burgdorferi 118a] gi|225370693|gb|EEH00129.1| PhnP protein [Borrelia burgdorferi 94a] Length = 253 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + E S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFL----ESSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRAAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + P KS ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFE-PFFFKS----LKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLK 250 >gi|39997560|ref|NP_953511.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|39984451|gb|AAR35838.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] Length = 251 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 141/261 (54%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP + C T+P+++RTR+SL I + ++VDT PD Sbjct: 3 ITILGSGTSTGVPMVGCTCSVCSSTDPRDKRTRASLLIE-----AAGRYILVDTSPDLRR 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE + IDAVL TH HADH++GID LRG+ +R I Y + M + +F Y F Sbjct: 58 QALREHIPHIDAVLLTHSHADHVNGIDDLRGFHFIHRRVIPCYGNRETMDAVLRNFSYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 K ++ Y P+++P VI + P + G I +PI HG + + G+R AY TD Sbjct: 118 KGMEAAGYAPLLDPHVIHD---PFAL--FGRTI--VPIHLHHGTMPATGYRIDGAAYLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P SL L LD L+IDAL+ H +HF++ +L + + PK I TH+ ++ Y Sbjct: 171 CSRIPESSLALLGGLDLLVIDALRYTPHENHFNIDGALGVVAELRPKRTIFTHLTHEVAY 230 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ P V A+DGM S Sbjct: 231 ADGIR-LPEGVEFAYDGMTVS 250 >gi|305667096|ref|YP_003863383.1| putative hydrolase [Maribacter sp. HTCC2170] gi|88708030|gb|EAR00268.1| putative hydrolase [Maribacter sp. HTCC2170] Length = 254 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 12/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I D C +P+++R R S+ +S + ++D GPDF Q Sbjct: 4 TFLGTGTSQGIPVIGSDHPVCLSEDPRDKRLRVSVLLS-----WDDYNYVIDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +D +L+TH HADH GID +R +F +Q I +YA + L F Y F Sbjct: 59 MLTTNVSKLDGILFTHEHADHTAGIDDIRPFFFRQG-DIPIYAHERVAESLKTRFDYIFA 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D P V +I+NN +P + GG + +PI H R+ GFR Y TDV Sbjct: 118 NEDRYPGAPAVEVNIIQNN-IPFVL---GGQM-VVPINAHHNRLQVFGFRINGFTYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 E +EK++ + L+++AL+ H SHF+L E+L+ IE +NPK A L+H+ H+ + Sbjct: 173 KTVDDEEIEKIKGSNILVVNALRKKPHHSHFNLKEALEFIEKVNPKKAYLSHISHLLGFH 232 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V K P+ V A+D +Q S Sbjct: 233 EEVEKELPNNVHLAYDNLQLS 253 >gi|193214485|ref|YP_001995684.1| beta-lactamase domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087962|gb|ACF13237.1| beta-lactamase domain protein [Chloroherpeton thalassium ATCC 35110] Length = 259 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 92/265 (34%), Positives = 139/265 (52%), Gaps = 20/265 (7%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P + C +P+++R R+SL + E G +++DT DF Q Sbjct: 4 TFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFV----ETGQKN-ILIDTSADFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR + ID +L TH H DH++G+D +R + ++ IDVY PDC+ + F Y F Sbjct: 59 MLRSSIRKIDLILLTHHHFDHLYGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFH 118 Query: 128 ALDDRTYPP------IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + + P +V P + N+ I + P+ HGR+ G+R GN+ Sbjct: 119 RDNLQIGLPALRMHAVVKPFFVGENNHKITIT---------PVEVGHGRLGIYGYRIGNM 169 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD P +S + L+NLD LII++L+ LH +H SL ESL I+ I+PK A LTH Sbjct: 170 AYLTDCKTIPDKSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFS 229 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 +L + + P V PA D ++ Sbjct: 230 HELKHSRLDAELPENVFPAHDMLEL 254 >gi|227537338|ref|ZP_03967387.1| phosphonate metabolism protein PhnP [Sphingobacterium spiritivorum ATCC 33300] gi|227242841|gb|EEI92856.1| phosphonate metabolism protein PhnP [Sphingobacterium spiritivorum ATCC 33300] Length = 254 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 139/258 (53%), Gaps = 12/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C +P+N+R RSS+ I G+N +++DTGPDF Q Sbjct: 4 TFLGTGTSQGVPVIACHCEVCQSADPRNKRLRSSVMIEF---EGNN--IVIDTGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE+V +DA+L TH H DHI G+D +R + +QK+ I +Y + L F Y F Sbjct: 59 MLREEVNHLDAILMTHSHKDHIAGLDDVRAFNYQQKQSIPIYGTQALHEALKREFYYAF- 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP V + + D G E IPI H ++ LG+R N AY TD Sbjct: 118 --SDIKYPG-VPQLELREIDGSQSFHLYGK--EIIPIEVMHFKMPVLGYRIANFAYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-Y 246 ES+EKL+ +++L+I+AL+ H SHF+L E++ + +N K LTH+ L + Sbjct: 173 KTVSDESVEKLKGVEYLVINALQKEPHISHFTLEEAISFADKVNAKQTYLTHISHRLGLH 232 Query: 247 DMVLKSTPSRVVPAFDGM 264 + V + P + A+DG+ Sbjct: 233 EEVSRELPDHIELAYDGL 250 >gi|195941667|ref|ZP_03087049.1| phnP protein (phnP) [Borrelia burgdorferi 80a] gi|226321011|ref|ZP_03796556.1| PhnP protein [Borrelia burgdorferi 29805] gi|226233612|gb|EEH32348.1| PhnP protein [Borrelia burgdorferi 29805] gi|312149584|gb|ADQ29655.1| PhnP protein [Borrelia burgdorferi N40] Length = 253 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + E S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFL----ESSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + P KS ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFE-PFFFKS----LKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLK 250 >gi|297538542|ref|YP_003674311.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297257889|gb|ADI29734.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 254 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/259 (35%), Positives = 140/259 (54%), Gaps = 11/259 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G+S G P I AC T+P+N RTR S + + ++++DTGPD Sbjct: 3 LTMLGVGSSAGTPMIGCKCPACASTDPRNNRTRCS----SIIHLKNGKSILIDTGPDLRQ 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE++ SIDAVLYTH HADH+HGID LR + Q+ I +Y + D M+H+ + F Y Sbjct: 59 QSLREKLTSIDAVLYTHTHADHLHGIDDLRAFCQIQRTQIPLYGSHDAMQHIADKFGYTL 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P++ +I P + IPI +HG G+R G++AY TD Sbjct: 119 REPSNFWDLPVLKTHIIS---APFQLFEQ----TVIPIPLKHGNSDIYGYRVGDIAYLTD 171 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V++ P SL LQ L L++D L+ H +H +L +SL LI + L HM +L++ Sbjct: 172 VSSIPEASLALLQGLKVLLLDCLRYTTHYTHINLEQSLHYASLIQADSTYLIHMTHELEF 231 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 + + P V +DG++ Sbjct: 232 AALSEQLPKNVFVGYDGLK 250 >gi|15594878|ref|NP_212667.1| phnP protein (phnP) [Borrelia burgdorferi B31] gi|218249936|ref|YP_002375039.1| PhnP protein [Borrelia burgdorferi ZS7] gi|226321839|ref|ZP_03797365.1| PhnP protein [Borrelia burgdorferi Bol26] gi|2688455|gb|AAC66903.1| phnP protein (phnP) [Borrelia burgdorferi B31] gi|218165124|gb|ACK75185.1| PhnP protein [Borrelia burgdorferi ZS7] gi|226233028|gb|EEH31781.1| PhnP protein [Borrelia burgdorferi Bol26] Length = 253 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + E S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFL----ESSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDRLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + P KS ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFE-PFFFKS----LKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLK 250 >gi|312148266|gb|ADQ30925.1| PhnP protein [Borrelia burgdorferi JD1] Length = 253 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + E S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFL----ESSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDRLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARGTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + P KS ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFE-PFFFKS----LKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLK 250 >gi|253698964|ref|YP_003020153.1| beta-lactamase [Geobacter sp. M21] gi|251773814|gb|ACT16395.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 251 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 143/257 (55%), Gaps = 13/257 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G S GVP + C T+P+++RTR+S+ + +R ++VDT D Q Sbjct: 4 TILGSGTSTGVPMVGCHCQVCGSTDPRDKRTRASILVESCGQR-----ILVDTSTDLRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + +DAVL TH HADHIHGID LRG++ +R I Y + + M+ + F Y F+ Sbjct: 59 ALREGIPHVDAVLLTHTHADHIHGIDDLRGFYFIHRRIIPCYGSAETMQSASDKFSYIFE 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L Y P++ P +E+ + G + +PI +HG + G+RF + AY TD Sbjct: 119 GLRSEGYSPLLEPFPVEDP-----FELFGCRVVPVPI--KHGSFHATGYRFDDAAYLTDC 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P SL L+ L+ LIIDAL+ H +HF++ +L+ + + P+ + TH+ ++ + Sbjct: 172 SEIPEGSLALLEGLELLIIDALRFSPHPNHFNIEGALQVAQKLRPRRTLFTHLTHEVRHS 231 Query: 248 MVLKSTPSRVVPAFDGM 264 + P+ V A+DGM Sbjct: 232 DGCR-LPAGVEFAYDGM 247 >gi|189426379|ref|YP_001953556.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422638|gb|ACD97036.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 253 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 13/259 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C ++P++RR+R+SL I R + ++VD+ D Q+ Sbjct: 5 VLGSGTSTGVPMVGCSCPVCSSSDPRDRRSRASLLI-----RHAGKNILVDSSTDLRSQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE V IDAVL+TH HADH++GID LRG++ ++ I YA P M+ L F Y F Sbjct: 60 LREMVPQIDAVLFTHAHADHVNGIDDLRGFYFLHRQVIPCYACPATMERLLSGFGYVFHQ 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 T+PP++ V P + ++ +P+ +HG S G+R G+ AY TD + Sbjct: 120 EKGATHPPLLEARVTGG---PFDLFG----LQVLPVPLEHGVDGSCGYRIGSFAYLTDCS 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 A P SL LQ + +++D L+ H HF++ ++ + + + ILTH+ ++ + Sbjct: 173 AIPPASLALLQGVATVVVDGLRWSPHPFHFNIEGAIAALRELGVRRMILTHLTHEVRH-A 231 Query: 249 VLKSTPSRVVPAFDGMQFS 267 + P+ V A+DGM F Sbjct: 232 DERRLPNGVEFAYDGMNFE 250 >gi|88802749|ref|ZP_01118276.1| putative hydrolase [Polaribacter irgensii 23-P] gi|88781607|gb|EAR12785.1| putative hydrolase [Polaribacter irgensii 23-P] Length = 260 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 138/267 (51%), Gaps = 13/267 (4%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K + T LG G S GVP I C TN K++R RSS+ IS + ++D G Sbjct: 5 KKTLNITFLGTGTSQGVPMIASKDPVCLSTNIKDKRLRSSILIS-----WDDKKYVIDCG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q+LRE V + VL+TH H+DH GID LR + K + +Y + L + Sbjct: 60 PDFRQQMLREDVQLVHGVLFTHEHSDHTAGIDDLRPFCYKIGE-MPIYLNQRTLASLEQR 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F + P V P +I+ + P + + I +PI HG++ LG+R N+ Sbjct: 119 FEYIFSKENRYPGAPSVQPNIIK--ETPFLLDT----ISVVPIAVAHGKLPILGYRIQNI 172 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD+ EKL+NLD LI++AL+ H +H +L E+L + + PK A TH+ Sbjct: 173 AYLTDLKTIAIAEKEKLKNLDVLIVNALRIDAHPTHLNLQEALDFVGELQPKKAYFTHIS 232 Query: 242 VDLDY-DMVLKSTPSRVVPAFDGMQFS 267 L + D V K PS V AFDG++ Sbjct: 233 HKLGFHDEVSKILPSNVFLAFDGLKIQ 259 >gi|300769811|ref|ZP_07079691.1| lipoate-protein ligase B [Sphingobacterium spiritivorum ATCC 33861] gi|300763262|gb|EFK60078.1| lipoate-protein ligase B [Sphingobacterium spiritivorum ATCC 33861] Length = 254 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 139/258 (53%), Gaps = 12/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C + +N+R RSS+ I G+N V++DTGPDF Q Sbjct: 4 TFLGTGTSQGVPVIACHCEVCQSADHRNKRLRSSVMIEF---EGNN--VVIDTGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE+V +DA+L TH H DHI G+D +R + +QK+ I +Y + L F Y F Sbjct: 59 MLREEVNHLDAILMTHSHKDHIAGLDDVRAFNYQQKQSIPIYGTQALHEALKREFYYAF- 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP + + E +D G E PI H ++ LG+R N AY TD Sbjct: 118 --SDIKYPGVPQLELREIDDSQ-SFHLYGK--EITPIEVMHFKMPVLGYRIENFAYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-Y 246 ES+EKL+ +++L+I+AL+ H SHF+L E+++ +NPK LTH+ L + Sbjct: 173 KTVSDESVEKLKGVEYLVINALQKEPHISHFTLEEAVEFANQVNPKQTYLTHISHRLGLH 232 Query: 247 DMVLKSTPSRVVPAFDGM 264 + V K P + A+DG+ Sbjct: 233 EEVSKELPDHIQLAYDGL 250 >gi|327402038|ref|YP_004342876.1| metal-dependent hydrolase [Fluviicola taffensis DSM 16823] gi|327317546|gb|AEA42038.1| metal-dependent hydrolase [Fluviicola taffensis DSM 16823] Length = 257 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 16/262 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G S G+P I D C ++ R R S+ + G N ++D GPDF Q Sbjct: 6 TILGSGTSQGIPVIACDCHVCTSQKVEDNRLRCSVLLEI---EGKN--YVIDAGPDFRQQ 60 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L+ QV +++AVL+TH H DH+ G+D +R + K+ R +D+Y + L + Y F Sbjct: 61 MLKFQVKNLEAVLFTHEHKDHMAGLDDVRAFNFKESRDMDIYCTKAVEEALRREYHYAF- 119 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 ++ YP P +N I IEN + I +P+ H + LGFR G+ AY T Sbjct: 120 --EEDKYPGIPQLNIITIENEPFRL-----SNTIPIVPVEVMHYFMPVLGFRIGDFAYIT 172 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 D A+ +EKL+ + LI++AL+ H SHF+L E+L I+ + P+ A LTH+ H+ Sbjct: 173 DAKTVSAKEIEKLKGVKVLIVNALRKEPHISHFNLEEALHFIQEVKPEKAYLTHISHLFG 232 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 + + P V A+DG++F Sbjct: 233 THAEIESELPENVFAAYDGLKF 254 >gi|83816562|ref|YP_444636.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] gi|83757956|gb|ABC46069.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] Length = 291 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 133/265 (50%), Gaps = 12/265 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I D C +P++ RTR + + V + G +++DTGPDF Q Sbjct: 26 TLLGTGTSTGVPVIGCDCEVCTSADPRDTRTRCACYVE-VGDMG----LLIDTGPDFRAQ 80 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + IDAV YTH H DH+ G+D LR YF +R + YA + L ++ Y F Sbjct: 81 ALREDIDRIDAVCYTHHHFDHVVGLDDLRPYFRDNRRVMPCYAHAETAAVLRRNYDYVFG 140 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP---ILQQHGRISSLGFRFGNVAYC 184 YP N + +E D P + S A+P IL HG + G+R G AY Sbjct: 141 G---DPYPGAAN-VELEVVDGPFRVPSRTAADTAVPVDPILLMHGDVPVYGYRLGRFAYL 196 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P S E+LQ +D L++D L+ H +HFS E++ I + L HM D+ Sbjct: 197 TDASAIPEASYEQLQGIDTLVLDGLRPRPHPTHFSFDEAVAAARRIGARETYLVHMTHDV 256 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 + + P V A DG+ P Sbjct: 257 RHAEAEAALPDDVHLAHDGLTLEVP 281 >gi|225552239|ref|ZP_03773179.1| PhnP protein [Borrelia sp. SV1] gi|225371237|gb|EEH00667.1| PhnP protein [Borrelia sp. SV1] Length = 253 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + E S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFL----ESSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPHNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + P KS ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFE-PFFFKS----LKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLK 250 >gi|157804260|ref|YP_001492809.1| hypothetical protein A1E_05565 [Rickettsia canadensis str. McKiel] gi|157785523|gb|ABV74024.1| hypothetical protein A1E_05565 [Rickettsia canadensis str. McKiel] Length = 254 Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGYDIKYQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++RE++ +D + TH H+DH++GI+ LR + K+P+++Y + + L + F Y FK Sbjct: 60 LVREKISKLDCAILTHDHSDHVNGIEDLRVFSFTSKKPLEIYTNYNTVAKLHKKFDYLFK 119 Query: 128 ALDDRTYPPIVNPI-VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P V P V++ + K IE Q HG I SLG R G+ Y D Sbjct: 120 -------PASVMPWQVLDTKPIDFFDKIKISTIEIQFFRQHHGSIDSLGLRIGDFVYSPD 172 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 173 VIDFPLESEKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEEILLTNMRHTIDY 232 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + K PS V P +DG +F+ Sbjct: 233 HEITKMLPSDVKPLYDGYKFT 253 >gi|326387754|ref|ZP_08209360.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207800|gb|EGD58611.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 255 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 17/263 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG G S GVPRI DWGACDP P+NRRTR ++ V E + ++VDT PD Sbjct: 3 LIMLGSGTSTGVPRIGNDWGACDPAEPRNRRTRVAI----VVEGDDGSRLLVDTPPDLRQ 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V ID V +TH HADH HGID LR + + P+ YAA + ++ L F Y F Sbjct: 59 QLLATSVDRIDGVFWTHDHADHTHGIDDLRPLRMGRGAPLPGYAADETVRRLRMRFGYVF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 YP I + ++N D + M + GV HG S FRF ++ Sbjct: 119 AG--QHGYPTICS---LDNLD-RVRMVAGIGVSHC---QMAHGPAQSTAFRFDQGGKSIG 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + A+ + +D L++DAL+ H +H +L+ +L+ +A+LTH+ Sbjct: 170 YATDFSEINADMVALFDRVDVLVVDALRRQAHPTHANLAMALELANAARVGHAVLTHLDK 229 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 +DY + P V P +DG++ Sbjct: 230 SMDYRSLCDELPPHVEPGYDGLE 252 >gi|294506387|ref|YP_003570445.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber M8] gi|294342715|emb|CBH23493.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber M8] Length = 287 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 133/265 (50%), Gaps = 12/265 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I D C +P++ RTR + + V + G +++DTGPDF Q Sbjct: 26 TLLGTGTSTGVPVIGCDCEVCTSADPRDTRTRCACYVE-VGDMG----LLIDTGPDFRAQ 80 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + IDAV YTH H DH+ G+D LR YF +R + YA + L ++ Y F Sbjct: 81 ALREDIDRIDAVCYTHHHFDHVVGLDDLRPYFRDNRRVMPCYAHAETAAVLRRNYDYVFG 140 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP---ILQQHGRISSLGFRFGNVAYC 184 YP N + +E D P + S A+P IL HG + G+R G AY Sbjct: 141 G---DPYPGAAN-VELEVVDGPFRVPSRTADDTAVPVDPILLMHGDVPVYGYRLGRFAYL 196 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P S E+LQ +D L++D L+ H +HFS E++ I + L HM D+ Sbjct: 197 TDASAIPEASYEQLQGIDTLVLDGLRPRPHPTHFSFDEAVAAARRIGARETYLVHMTHDV 256 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 + + P + A DG+ P Sbjct: 257 RHAEAEAALPDDIHLAHDGLTLEVP 281 >gi|253999086|ref|YP_003051149.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|313201187|ref|YP_004039845.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|253985765|gb|ACT50622.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] gi|312440503|gb|ADQ84609.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 254 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 139/261 (53%), Gaps = 11/261 (4%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G+S G P + C ++ +N+RTR S I+ + V++DTGPD Sbjct: 2 QLTMLGVGSSAGTPVVGCQCATCRSSDARNKRTRCSSAITF----PNGEVVLIDTGPDLR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q LRE + +DAVLYTH HADH+HGID LR + Q++ I +Y D + H+ + F Y Sbjct: 58 FQALREGLNRVDAVLYTHTHADHLHGIDDLRAFCQIQRKQIPLYGKADALAHIADKFGYT 117 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + D P++ N+V + G + IP+ +HG LGFR GN+AY T Sbjct: 118 IREPSDFWDLPVLGL-----NEVKAPFELFGQTVTPIPV--KHGYSDILGFRIGNLAYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+ P SL LQ LD L++D L+ H +H +L +SL+ +I + L HM +++ Sbjct: 171 DVSEIPEASLPLLQGLDVLLLDCLRYKPHYTHINLEQSLEYAAMIAAADTYLIHMTHEME 230 Query: 246 YDMVLKSTPSRVVPAFDGMQF 266 Y V P V +DG+Q Sbjct: 231 YAAVSALLPPNVHVGYDGLQL 251 >gi|296535548|ref|ZP_06897730.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] gi|296264134|gb|EFH10577.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 10/250 (4%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 LG GDWGACDP P+N RTRSS+ I E G ++VD GPD Q+L ++ Sbjct: 4 LGGADAAGDWGACDPAEPRNARTRSSILI----EDGDGRRLLVDAGPDLRRQLLANRIGR 59 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT-Y 134 +DA+L TH HADHI G+D R I VYA P+ + L F Y F+ Y Sbjct: 60 VDALLVTHGHADHIMGLDEFRPLNRALGAAIPVYATPETLAELKRRFDYIFREPTPPVFY 119 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P + PI + D ++ AG ++ Q H + +LG R G AY TDV P ES Sbjct: 120 RPALTPIAVGMQD---RIEPAGLPVQLF--RQDHKVMETLGLRIGRFAYSTDVVNLPEES 174 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP 254 L L+ ++ ++ + HS H + L+ E + P+ +LTHM DLD+ + ++ P Sbjct: 175 LAALEGVETWVVGCFQRQPHSVHAHVERVLEWRERLRPRRVVLTHMGHDLDWGWMQRNLP 234 Query: 255 SRVVPAFDGM 264 V A DG+ Sbjct: 235 PGVEAAHDGL 244 >gi|320537741|ref|ZP_08037666.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] gi|320145420|gb|EFW37111.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] Length = 270 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 144/269 (53%), Gaps = 18/269 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G S G+P I + C +P++ R R+S I R ++++D GP+F + Sbjct: 3 LEILGSGTSHGIPVIGCNCSVCTSADPRDTRYRASAWI-RPKNNSEKPSILIDCGPEFRL 61 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LR + ++DAVL TH HA+H+HG+D LR + K PI Y C + + + F Y F Sbjct: 62 QALRAGMQNLDAVLLTHSHANHVHGLDDLRIFSYKTSLPI--YLEKYCAEDIKKRFSYVF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P + VIE+++ +K G IEAIP++ HGRI G+R N AY TD Sbjct: 120 THAYEGGGIPHFSLHVIEDSNPVFYLK--GVRIEAIPLI--HGRIIDFGWRIENTAYLTD 175 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 N P S EKL+ L LIID L+ H +HF +ESL I+ I P+ A LTH+ D+ + Sbjct: 176 CNFIPDSSFEKLKGLKNLIIDGLRVRKHITHFCFAESLDAIKRIAPQKAWLTHICHDVSH 235 Query: 247 DMVL-------KSTPS----RVVPAFDGM 264 + ++ P ++ PA+DG+ Sbjct: 236 KEICAIIEEAQQNDPELAKIKISPAYDGL 264 >gi|295134377|ref|YP_003585053.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] gi|294982392|gb|ADF52857.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] Length = 256 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/263 (35%), Positives = 141/263 (53%), Gaps = 17/263 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C NPK++R R S+ V G N +++D GPDF MQ Sbjct: 4 TFLGTGTSQGIPIIGSTHPVCLSKNPKDKRLRVSV---MVEWEGLN--ILIDCGPDFRMQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L +DA+L+TH H DH+ G+D +R +F +Q I +YA + L + F Y F Sbjct: 59 MLANNFARLDAILFTHEHNDHVAGLDDIRPFFFRQGN-IPIYAHERVLNALKKRFDYIF- 116 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + + YP P VN ++ +ND I K P+ H ++ G+R G AY T Sbjct: 117 -VTENKYPGAPGVNEHIVTDNDFEIQGK------HITPVSYLHNQLQVYGYRMGGFAYLT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 D+ + EKL+NL+ +++ AL+ H SHF+L+E+L+ IE I P LTH+ H+ Sbjct: 170 DIKSISETEAEKLKNLEVVVVSALRVEPHHSHFNLAEALEFIEKIKPNKTYLTHISHLLG 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 +D V +S P V A+D ++ S Sbjct: 230 FHDEVEQSLPENVHLAYDNLKIS 252 >gi|126663850|ref|ZP_01734845.1| metal-dependent hydrolase [Flavobacteria bacterium BAL38] gi|126624114|gb|EAZ94807.1| metal-dependent hydrolase [Flavobacteria bacterium BAL38] Length = 255 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 143/271 (52%), Gaps = 22/271 (8%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK Y+ LG G S G+P I C ++ K++R R S+ I N ++++D Sbjct: 1 MKVYF----LGTGTSQGIPVIGSQHSVCLSSDDKDKRLRVSVWI-----ETDNNSIVIDC 51 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + IDA+L+TH HADH G+D +R +F KQ I +YA +K+L + Sbjct: 52 GPDFRQQMLTSKCPKIDALLFTHEHADHTAGLDDIRPFFFKQG-AIAIYAHTRVLKNLEK 110 Query: 121 SFRYCFKALDDRTYPPIVNPIVIEN---NDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F Y F+ + YP P VIEN N+VP + + IPI HG + G+R Sbjct: 111 RFDYIFQT--ENKYPGA--PSVIENEVINNVPFLVNNEV----VIPINAYHGSLQVFGYR 162 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 N Y TDV ++K++N + L+++ L+ H++HF+L E L I L+ PK L Sbjct: 163 IQNFVYLTDVKTIETSEIDKIKNCEVLVVNCLREEQHATHFNLEEVLHFISLVQPKTTYL 222 Query: 238 THM-HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 TH+ H+ ++ + P V A+D ++ + Sbjct: 223 THISHLFGFHEEIQNKLPKNVFVAYDNLEIN 253 >gi|283781918|ref|YP_003372673.1| beta-lactamase domain-containing protein [Pirellula staleyi DSM 6068] gi|283440371|gb|ADB18813.1| beta-lactamase domain protein [Pirellula staleyi DSM 6068] Length = 255 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 140/258 (54%), Gaps = 10/258 (3%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S+GVP I + C +P++ RTR S+ + E+G+ +++DT PD Q+ Sbjct: 3 ILGTGTSVGVPAIGCNCPVCTSKDPRDNRTRCSVILG--LEQGN---LLIDTPPDLRQQL 57 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE++ + AVL+TH HADH+ G+D LR + + +Y + +SF Y F Sbjct: 58 LREKIGLVHAVLFTHEHADHVFGLDDLRLFPFYLGHAVPLYCEAKVEARIRKSFDYAFS- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCTDV 187 D+ + +E + + G +PI +HG R LGFRFGNVAYCTD Sbjct: 117 --DKPHTHEGAAPQLEFRSISVEPFEILGQ-HFMPIRLRHGPRFEVLGFRFGNVAYCTDT 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N E+L KL+ LD L++DAL+ H +HFSL E++ E +NPK I TH+ +L Y Sbjct: 174 NGITDENLAKLEGLDVLVLDALRPRPHVTHFSLDEAVAVAEKLNPKRTIFTHISHELPYA 233 Query: 248 MVLKSTPSRVVPAFDGMQ 265 P+ + +DGM+ Sbjct: 234 ATNDRLPTGMELGYDGMR 251 >gi|149177580|ref|ZP_01856182.1| hypothetical protein PM8797T_00197 [Planctomyces maris DSM 8797] gi|148843560|gb|EDL57921.1| hypothetical protein PM8797T_00197 [Planctomyces maris DSM 8797] Length = 275 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 32/272 (11%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG G S+G+P + D C +PKN+R R+S+ I ++DT P+ + Sbjct: 15 FITLGTGTSVGIPIVGCDCEVCQSPDPKNQRGRTSVYIG-----APEGGFLIDTPPELRL 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LRE + + AVLYTH HADHI G+D +R + ++ I++Y + + SF Y F Sbjct: 70 QLLREHIPWVHAVLYTHSHADHIFGLDDVRISGYRLEKSIELYCEEAVEEQIRGSFNYAF 129 Query: 127 KA------------LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + LD +T I +E D+ G I+ PI HG + L Sbjct: 130 EEPTHNRHHMSRPHLDFKT-------ISLEPFDL------LGLRIQ--PIRLMHGTLPIL 174 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 G+R N+A+CTDV+ P ES + L+ LD+LI+DAL+ H +HF L +SL+ +E + PK Sbjct: 175 GYRINNIAFCTDVSEIPEESWQYLEGLDYLILDALRIKPHPTHFCLEQSLEVVERVKPKR 234 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 TH+ L+++ + P V A+DG+ Sbjct: 235 TYFTHISHSLEHEETNANLPDHVELAYDGLSL 266 >gi|144899821|emb|CAM76685.1| PhnP-like protein [Magnetospirillum gryphiswaldense MSR-1] Length = 263 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 139/259 (53%), Gaps = 14/259 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGA+ GVP I+ WGACDP NP+NRR R S+ I G + ++VDT PD Q Sbjct: 4 TILGCGAAGGVPSISRGWGACDPDNPRNRRRRPSILI-----HGPDGAILVDTSPDCREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + + AVLYTH HADH+HGID LR + + ++A + + F Y Sbjct: 59 LLDTGINRLAAVLYTHDHADHMHGIDDLREVNRAMRAHLPIHATAGVLDCIRSRFPYVVG 118 Query: 128 ALDD--RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + + Y P+++ I+ + S GGV E +P Q HG + GFRFG +AY T Sbjct: 119 GVGEGQSIYKPLLDLHPIDG------VFSVGGV-EVVPFDQDHGYCRTTGFRFGPLAYST 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P S + L +D I+ L H +H L + L IE I P+ AILTHM LD Sbjct: 172 DVVELPESSFDILAGIDTWIVGCLSYDPHPTHAHLDKVLGWIERIRPRQAILTHMTPSLD 231 Query: 246 YDMVLKSTPSRVVPAFDGM 264 YD + P V PA DG+ Sbjct: 232 YDTLCNILPPHVRPAHDGL 250 >gi|91206134|ref|YP_538489.1| beta-lactamase superfamily hydrolase [Rickettsia bellii RML369-C] gi|157826434|ref|YP_001495498.1| beta-lactamase superfamily hydrolase [Rickettsia bellii OSU 85-389] gi|91069678|gb|ABE05400.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia bellii RML369-C] gi|157801738|gb|ABV78461.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia bellii OSU 85-389] Length = 254 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCGCSICLSDSKYNKRTRSAIYIN-----DENSQILVDFGFDIKHQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++RE+V +D + TH H+DH++GID LR + +K+ +++Y + +L +SF Y F Sbjct: 60 LIREKVNKLDCAVLTHYHSDHVNGIDDLRIFSFMEKKALEIYTDENTAVNLHKSFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 Y + V+E ++ K IE Q HG I SLG R G+ Y DV Sbjct: 119 -----GYNSFMQGPVLETKNIGFFDKIKINTIEIQFFRQNHGPIDSLGLRIGDFVYSPDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + LQN+ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 INFPPESEKFLQNIKIWILDCMDYTSNKNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQF 266 ++K P V P +DG +F Sbjct: 234 EIIKILPDNVKPLYDGYRF 252 >gi|154490156|ref|ZP_02030417.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] gi|154089048|gb|EDN88092.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] Length = 261 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 15/265 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I C ++ ++ R R+S+ + +R +++D GPDF Sbjct: 3 ITFLGTGTSTGVPEIGCQCEVCTSSDKRDWRLRTSVLVETDGKR-----ILLDCGPDFRW 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 QV+R + +DAVL +H H DH+ G+D LR + +++ +DVYA + + + Y F Sbjct: 58 QVIRNKTYRLDAVLISHEHYDHVGGLDDLRPFC--REKGVDVYAEDNVAEAIETRIPYVF 115 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +A YP + N + + P + I PI HG++ G+R GN+AY TD Sbjct: 116 RA---HKYPGVPNLELHRIGNEPFVVAG----ISVTPIRVMHGKLPIFGYRIGNMAYLTD 168 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLD 245 V P E KL+ LD LI+ AL+ G H +H SL E+L IE I PK L HM H Sbjct: 169 VKYLPEEEYAKLEGLDVLILTALRRGAHPTHESLEEALVNIERIKPKETYLIHMSHRIGL 228 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSPI 270 + V K P V A+DG+ S+ + Sbjct: 229 HAEVEKELPPHVHLAYDGLHVSTAL 253 >gi|150007789|ref|YP_001302532.1| putative hydrolase [Parabacteroides distasonis ATCC 8503] gi|255013502|ref|ZP_05285628.1| putative hydrolase [Bacteroides sp. 2_1_7] gi|256840055|ref|ZP_05545564.1| metal-dependent hydrolase [Parabacteroides sp. D13] gi|298376841|ref|ZP_06986796.1| lipoate-protein ligase B [Bacteroides sp. 3_1_19] gi|149936213|gb|ABR42910.1| metal-dependent hydrolase [Parabacteroides distasonis ATCC 8503] gi|256738985|gb|EEU52310.1| metal-dependent hydrolase [Parabacteroides sp. D13] gi|298266719|gb|EFI08377.1| lipoate-protein ligase B [Bacteroides sp. 3_1_19] Length = 251 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 15/259 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G P I C +P++ R R+S+ + +R +++D GPDF Q++ Sbjct: 6 LGTGTSTGNPEIGCQCEVCTSKDPRDWRLRASILVETEGKR-----ILIDCGPDFRWQMI 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 ++ DAVL TH H DH+ G+D LR + + + +D+YA + ++ + Y F+ Sbjct: 61 TNKIYHFDAVLVTHEHYDHVGGLDDLRPF--GRYKDVDIYAEDNVVEAIKTRIPYVFR-- 116 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + YP + N ++ P A GV+ PI H ++ LGFR GN+AY TD+ Sbjct: 117 -EHKYPGVPNLVLHTIGTKPF---EAAGVM-ITPIRVMHAKLPILGFRIGNMAYLTDLKY 171 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDYDM 248 P E KL+NLD L+IDAL+ G H SH SL E+L I I PK A L HM H + + Sbjct: 172 LPEEEYAKLENLDVLVIDALRKGEHQSHESLEEALANISRIQPKEAYLIHMSHRIGLHAV 231 Query: 249 VLKSTPSRVVPAFDGMQFS 267 V K P V ++DG+ + Sbjct: 232 VEKELPPHVHYSYDGLTVT 250 >gi|262381702|ref|ZP_06074840.1| metal-dependent hydrolase [Bacteroides sp. 2_1_33B] gi|301310175|ref|ZP_07216114.1| metal-dependent hydrolase [Bacteroides sp. 20_3] gi|262296879|gb|EEY84809.1| metal-dependent hydrolase [Bacteroides sp. 2_1_33B] gi|300831749|gb|EFK62380.1| metal-dependent hydrolase [Bacteroides sp. 20_3] Length = 251 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 15/259 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G P I C +P++ R R+S+ + +R +++D GPDF Q++ Sbjct: 6 LGTGTSTGNPEIGCQCEVCTSKDPRDWRLRASILVETEGKR-----ILIDCGPDFRWQMI 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 ++ DAVL TH H DH+ G+D LR + + + +D+YA + ++ + Y F+ Sbjct: 61 TNKIYYFDAVLVTHEHYDHVGGLDDLRPF--GRYKDVDIYAEDNVVEAIKTRIPYVFR-- 116 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + YP + N ++ P A GV+ PI H ++ LGFR GN+AY TD+ Sbjct: 117 -EHKYPGVPNLVLHTIGTKPF---EAAGVM-ITPIRVMHAKLPILGFRIGNMAYLTDLKY 171 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P E KL+NLD L+IDAL+ G H SH SL E+L I I PK A L HM + V Sbjct: 172 LPEEEYAKLENLDVLVIDALRKGEHQSHESLEEALANISRIQPKEAYLIHMSHRIGLHAV 231 Query: 250 L-KSTPSRVVPAFDGMQFS 267 + K P V ++DG+ + Sbjct: 232 IEKELPPHVHYSYDGLTVT 250 >gi|87199954|ref|YP_497211.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135635|gb|ABD26377.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 255 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/265 (34%), Positives = 130/265 (49%), Gaps = 17/265 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVPRI DWG CDP P+NRRTR ++ I E + ++VDT D Sbjct: 3 LTILGSGTSTGVPRIGNDWGDCDPNEPRNRRTRVAIAI----EGDDGSRLLVDTPTDLRQ 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q L + +D V +TH HADH HGID LR + PI YAA + ++ L + F Y F Sbjct: 59 QFLSCGIERVDGVFWTHDHADHCHGIDDLRPLRYGRGGPIPGYAAAETVRRLRQRFGYVF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 Y I I+N D + G +P HG S FRF ++ Sbjct: 119 AG--QHGYHTICE---IDNLDRVRMICGIGVSHCQMP----HGPAQSTAFRFDQGGKSIG 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + + + +D L++D L+ H +H L +L+ IE + +LTH+ Sbjct: 170 YATDFSEITGDMVALFHGIDVLVVDCLRRQPHPTHAHLGMALELIEATRANHGVLTHLDK 229 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFS 267 +DY + TP V PA+DG++ + Sbjct: 230 SMDYRTLCDETPPHVQPAYDGLEIA 254 >gi|116620959|ref|YP_823115.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224121|gb|ABJ82830.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 261 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 11/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S+GVP I C + +++R R S+ +S + V++DT PD Q Sbjct: 9 TVLGSGTSVGVPTIGCHCDVCTSQDARDKRLRPSVLVS-----FDDRNVLIDTTPDLRTQ 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LR ++ +DAVL+TH HADH+ G+D +R + +QK I ++A+P+ M + F+Y F Sbjct: 64 ALRARIERLDAVLFTHSHADHLMGLDDVRPFNFRQKGQIPIFASPETMAAVQRCFQYIFD 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P ++ V++ + G IPIL HG + GFRFG AY TD Sbjct: 124 NGKKESNVPKLDARVLDGTPFDV----FGMEFTPIPIL--HGSQTIYGFRFGGAAYLTDH 177 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P S+E L+ LD L +DAL+ H +H ++ S++ ++ + P A TH+ DL ++ Sbjct: 178 SDIPESSMEMLKGLDVLFLDALRYKPHPTHSTVERSIRTVDQLAPHRAFFTHICHDLGHE 237 Query: 248 MVLKSTPSRVVPAFDGMQ 265 P + A+DG++ Sbjct: 238 RAESMLPPHIRLAYDGLE 255 >gi|325108077|ref|YP_004269145.1| beta-lactamase [Planctomyces brasiliensis DSM 5305] gi|324968345|gb|ADY59123.1| beta-lactamase domain protein [Planctomyces brasiliensis DSM 5305] Length = 264 Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 140/261 (53%), Gaps = 10/261 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 ILG G S GVP + C T+PKN RTRSS+ + R +IVDT P+ +Q Sbjct: 9 VILGSGTSHGVPMVGCRCPICQSTDPKNNRTRSSILV-----RAPEGNIIVDTTPEMRIQ 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++REQV + A ++TH HADHI G+D LR + R I ++ P + L +F Y F+ Sbjct: 64 LVREQVDLVHAAIFTHGHADHIFGLDDLRQFGFLLDRDIPLFCEPLVEEQLRLAFSYAFR 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFGNVAYCTD 186 D P + + P+ ++ + + P+ HG + +GFR G +AYCTD Sbjct: 124 PPAD----PKRRGAIPRFDMQPMTLEPFELLGVRVQPLRLFHGSLPIVGFRIGELAYCTD 179 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P E+ L+ + L+IDAL+ H +HF++ ++++ I K LTH+ D+++ Sbjct: 180 VSEIPDETWPLLEGVQVLVIDALRFRPHPTHFNIEQAIEASRRIGAKQTYLTHICHDIEH 239 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 V + P V A+DG++F+ Sbjct: 240 QTVERELPEGVNLAYDGLKFA 260 >gi|325287634|ref|YP_004263424.1| beta-lactamase domain-containing protein [Cellulophaga lytica DSM 7489] gi|324323088|gb|ADY30553.1| beta-lactamase domain protein [Cellulophaga lytica DSM 7489] Length = 261 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 141/258 (54%), Gaps = 12/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C NPK++R R S+ IS N ++D GPDF Q Sbjct: 11 TFLGTGTSQGIPVIGSKHPVCLSKNPKDKRLRVSVLIS-----WDNYNFVIDCGPDFRQQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L+ + ++D +L+TH H+DH GID +R +F +Q I +YA ++ L + F Y F Sbjct: 66 MLQNPIPNLDGILFTHEHSDHTAGIDDIRPFFFRQGD-IPIYADNQVIQALKKRFAYIFA 124 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ P V I+ N P + G AIPI H R+ GFR + Y TDV Sbjct: 125 DINRYPGAPAVAIHEIKEN-TPFKI----GNKVAIPIKALHNRLEVFGFRIDDFVYLTDV 179 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + E + KL++++ L+++AL+ H SHF+L E+L+ I ++ PK A LTH+ H+ + Sbjct: 180 KSISKEEIAKLKDVNVLVVNALRLEAHHSHFNLEEALEFIAVVKPKKAYLTHISHLLGFH 239 Query: 247 DMVLKSTPSRVVPAFDGM 264 + V KS P+ V A+D + Sbjct: 240 EEVEKSLPNNVHLAYDNL 257 >gi|95931231|ref|ZP_01313951.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95132709|gb|EAT14388.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 259 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I D C + +N R R S ++ R V++DT D Sbjct: 8 ITILGSGTSSGVPVIGCDCPVCRSAHERNARMRCSALLAWGEFR-----VLIDTATDLRQ 62 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q L Q+ +DAVLYTH HADH++GID LR + + I VY A + L SF Y F Sbjct: 63 QALVHQMDRVDAVLYTHAHADHVNGIDDLRCFNALSGKDIPVYGASWMIAQLQHSFAYVF 122 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + + P + P VI + G ++ +P+ +HG+ +G+R G++ Y TD Sbjct: 123 RQ-QNGGFRPRLTPRVISGP-----FELFGRLV--VPVTLRHGKDDVIGYRIGSLGYLTD 174 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P ++ E+LQ LD L+ID L+ H +HF+++++++ +L+ K ILTH+ D++Y Sbjct: 175 CSEIPQQAREQLQGLDVLVIDGLRFRHHPTHFTIADAIEMAQLLQAKRVILTHLSHDVEY 234 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 P V A+DG+ + Sbjct: 235 VRDSSQLPEHVEFAYDGLSVT 255 >gi|91200847|emb|CAJ73901.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 254 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 140/260 (53%), Gaps = 15/260 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I + C NPKN+R R+S+ V E G + +++D P+ +Q + Sbjct: 7 LGTGTSHGVPMIACNCKVCTSDNPKNKRMRTSV---LVCENGCD--ILIDATPEMRLQCI 61 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF--K 127 + V +DAVL TH HADHI G+D LR + + Q++ I +Y PD ++ + F Y F + Sbjct: 62 KNNVTRLDAVLITHIHADHIFGLDDLRRFNIVQRKDIPIYGTPDTLEGIKRIFAYAFDIR 121 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 A +D Y P + I+ N +K G I +PI HG G+RF AY TDV Sbjct: 122 AKND-GYVPRFSLNAIDGN-----VKIGGFSI--VPIDAIHGNGLVTGYRFERFAYITDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P SL KL NLD L++ AL+ H+ HF++ ++L + + P+ TH+ D++++ Sbjct: 174 SEIPDHSLAKLMNLDVLVLGALRYTPHAKHFNIDQALDIVSKVRPQKTYFTHICHDIEHE 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 P V A+DG++ Sbjct: 234 STNSRLPENVELAYDGLRIK 253 >gi|91216317|ref|ZP_01253284.1| putative hydrolase [Psychroflexus torquis ATCC 700755] gi|91185455|gb|EAS71831.1| putative hydrolase [Psychroflexus torquis ATCC 700755] Length = 258 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 138/259 (53%), Gaps = 13/259 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D C NPK++R R S+ + + + ++D GPDF Q Sbjct: 9 TFLGTGTSQGVPIIGSDHPVCLSKNPKDKRLRVSVLLE-----WEDFSYVIDCGPDFRQQ 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V ID +L+TH H DH+ G+D +R ++ +Q I +Y+ ++ L + F+Y F+ Sbjct: 64 MLANNVKKIDGILFTHEHNDHVIGLDDIRPFYFRQGN-ISIYSHKRVLESLKQRFQYVFE 122 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P ++ +I+ D P + G E IP+ H + GFRFG+ AY TD Sbjct: 123 TENKYPGAPTLDTTIID--DSPFLI----GNKEVIPMNVYHPELQVYGFRFGDFAYVTDA 176 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 P E LEKL+ + L+++AL+ H SH +LS++L ++ + P+ A TH+ + + Sbjct: 177 KIIPDEELEKLKGVKTLVLNALRKEEHRSHLNLSQALDVVDYLKPERAYFTHISHHMGFH 236 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 D V P V ++D ++ Sbjct: 237 DDVQSELPEGVFLSYDNLK 255 >gi|171915795|ref|ZP_02931265.1| metallo-beta-lactamase superfamily protein [Verrucomicrobium spinosum DSM 4136] Length = 261 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 17/272 (6%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D T LG G S+G+P I D C ++P+++R+RSS+ + R T +VDTGP Sbjct: 2 DSLQITFLGTGTSVGIPMIGCDCATCTSSDPRDQRSRSSILV-----RTPEGTYVVDTGP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q LRE++ +DA LYTHPH DH+ G D LR + + + + +Y P C++ + + Sbjct: 57 DFRTQCLREKLKELDAALYTHPHMDHLTGFDDLRRFCVPEDAVMPIYGTPACLQVIRRMY 116 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 + F + Y + P E + V G +I +P+ +HG++ ++G+ F Sbjct: 117 EHAFNG--ENRYRGYLKP---EEHPVTGPFSLGGTLITPLPV--KHGKVETVGYLFSRGG 169 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 AY +D+ ++E ++ +D LI+DAL++ H +H + E+L + P+ Sbjct: 170 RKLCAYLSDMKEPLEGTVELMKGVDTLIVDALRHTPHPTHMNFEEALAFRTAVGPRQTWF 229 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 TH+ ++ + + P V A+DG++ S P Sbjct: 230 THIQCEIRHAQEEQKLPEDVRIAYDGLKLSWP 261 >gi|67459763|ref|YP_247387.1| beta-lactamase superfamily hydrolase [Rickettsia felis URRWXCal2] gi|67005296|gb|AAY62222.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia felis URRWXCal2] Length = 254 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGASLGVP I D C + N+RTRS++ I + N+ ++VD G D Q Sbjct: 5 TILGCGASLGVPVIGCDCSICLSNSKYNKRTRSAIYI-----KDENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D++ + + V K IE Q HG I SLG R G+ Y DV Sbjct: 119 --DNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESEKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|260063000|ref|YP_003196080.1| putative hydrolase [Robiginitalea biformata HTCC2501] gi|88784569|gb|EAR15739.1| putative hydrolase [Robiginitalea biformata HTCC2501] Length = 255 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 136/261 (52%), Gaps = 11/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I D C NP+++R R S+ I+ + G N +VD GPDF Q Sbjct: 4 TFLGTGTSQGIPVIGSDDPVCLSENPRDKRLRVSVMIT--YDDGYN--CVVDCGPDFRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L QV +D++L+TH HADH G+D +R +F +Q I +YA P + L F Y F Sbjct: 60 MLANQVTRLDSILFTHEHADHTAGMDDIRPFFFRQG-DIPIYAHPRVIASLQRRFDYIFT 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D+ YP + V N + G P+ H R+ GFRFG+ AY TDV Sbjct: 119 --DENRYPGAPSVAV---NTIEKGRAFRLGSHWVTPVEAWHNRLQVFGFRFGDFAYLTDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + E +LQ + L ++AL+ H SHF+L E+L IE + P+ A LTH+ + + Sbjct: 174 KSIEPEEAARLQGVRVLAVNALRLEPHHSHFNLEEALGFIESVGPERAYLTHISHRMGFH 233 Query: 248 MVLKST-PSRVVPAFDGMQFS 267 ++S P RV A D + + Sbjct: 234 AEVESRLPDRVHLAHDNLTLT 254 >gi|325103600|ref|YP_004273254.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] gi|324972448|gb|ADY51432.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] Length = 254 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 16/263 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C N K++R RSS+ I E G+ TTV++DTGPDF Q Sbjct: 4 TFLGTGTSQGVPVIACSCPVCLSKNKKDKRLRSSILI----ESGT-TTVVIDTGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR+ V S+DAV++TH H DHI G+D +R + KQ+ ++VYA + + L F Y F Sbjct: 59 MLRKNVQSLDAVVFTHEHKDHIAGLDDVRAFNYKQQSAMEVYATDNVQQSLKREFYYVFS 118 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 YP P++N I+ ++ G I+ +P+ H ++ LGFR + Y T Sbjct: 119 EF---KYPGIPLLNLHTIDKDEA-----FEIGDIKFMPVEVMHYKLPVLGFRINDFVYLT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL- 244 D E K++ FL+++AL+ H SH + E++ + + TH+ L Sbjct: 171 DAKTISNEEFGKIEGAKFLVLNALQKENHISHLTFQEAIDLANRVKADHTFFTHISHKLG 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 Y+ V K + A+DG++ + Sbjct: 231 KYEDVSKELQPNISLAYDGLEIN 253 >gi|312143854|ref|YP_003995300.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] gi|311904505|gb|ADQ14946.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] Length = 251 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 13/259 (5%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G S GVP I D C NPKN+R R+S+ I + + +++DT P+ Sbjct: 2 QITFLGTGTSHGVPVIACDCKTCQSNNPKNKRKRTSIYI-----KSNEYNLLIDTPPEMR 56 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 +Q+L ++ +D+VL TH HADHI G D +R Q + + +Y+ P+ + H+ F Y Sbjct: 57 LQLLENKIKDVDSVLMTHAHADHIMGFDDIRALNWYQNKAMPIYSNPETLAHIKRIFPYI 116 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + P ++ +V I+A+PI HG+ L +R N AY T Sbjct: 117 FAENNAGGVPQVIL------REVEQSFTLGDLKIKAVPIY--HGKNKILAYRINNFAYLT 168 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D + P +S + L+ +D+ IDAL+ H +H S+ ++++ + + K+ LTH+ L+ Sbjct: 169 DCSKIPEKSFKLLEGIDYAAIDALRYTEHPTHMSVDQAVELVNKLGLKHGYLTHISHRLE 228 Query: 246 YDMVLKSTPSRVVPAFDGM 264 ++ + P V PA+DG+ Sbjct: 229 HEDLANYLPKNVSPAYDGL 247 >gi|118594883|ref|ZP_01552230.1| probable hydrolase protein [Methylophilales bacterium HTCC2181] gi|118440661|gb|EAV47288.1| probable hydrolase protein [Methylophilales bacterium HTCC2181] Length = 256 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 97/263 (36%), Positives = 138/263 (52%), Gaps = 11/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG G+S G P + D C TNPKN RTR S I R +++DTGPD Sbjct: 3 FKLTILGSGSSAGTPVVGCDCSTCLSTNPKNNRTRCSSIIHLNDGR----NILIDTGPDL 58 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ LRE + +DAVL+TH HADH HGID LR + K I +Y + M L + F Y Sbjct: 59 RMQSLRESLTRVDAVLFTHHHADHCHGIDDLRAFCQINKIQIPLYGSEYVMGQLSQKFGY 118 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 P++ P + D P + G I IP+ HG+ G+R GN+AY Sbjct: 119 AMVDPKGFWEIPVLKPHSV---DRPF--ELFGQTITPIPLY--HGKSLINGYRIGNMAYL 171 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV++ P S++ L L+ L++D L+ H +HFS ES+ IN + L HM ++ Sbjct: 172 TDVSSIPDNSMQLLDGLEVLLLDCLRFRPHHTHFSYDESIAAAAKINAASTYLIHMTHEM 231 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 +Y+ + K P + +DG++ S Sbjct: 232 EYEELQKKLPEGIYAGYDGLKLS 254 >gi|87307192|ref|ZP_01089337.1| phnP protein-like [Blastopirellula marina DSM 3645] gi|87289932|gb|EAQ81821.1| phnP protein-like [Blastopirellula marina DSM 3645] Length = 271 Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 10/255 (3%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S+GVP I C +P N+R R S+ I + E ++VDT PD Q+ Sbjct: 19 LLGTGTSVGVPAIGCGCPVCTSRDPHNKRMRCSV-IWGLPE----GNLLVDTPPDMRSQL 73 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE++ + AV YTH HADH++G+D LR + + +Y P+ + + +F Y F Sbjct: 74 LREEIGIVHAVAYTHQHADHLYGLDDLRVFQFYLGHGVPLYCEPNVERQIRAAFSYAFSE 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCTDV 187 + T + +E + + + G + PI +HG R LGFR GNVAYCTD Sbjct: 134 I---TPTHVGATPALEFQRIGLNPFTVLGA-QVTPIRLKHGPRFEVLGFRIGNVAYCTDT 189 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N PAES LQ LD LI+DAL+ H +HFSL E++ E I K TH+ +D+ Sbjct: 190 NEIPAESFALLQGLDVLILDALRFDPHPTHFSLDEAVAMAEKIGAKQTYFTHISCRMDHQ 249 Query: 248 MVLKSTPSRVVPAFD 262 P + A+D Sbjct: 250 ETNAKLPDHMQLAYD 264 >gi|149371373|ref|ZP_01890859.1| metal-dependent hydrolase [unidentified eubacterium SCB49] gi|149355511|gb|EDM44070.1| metal-dependent hydrolase [unidentified eubacterium SCB49] Length = 259 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 11/268 (4%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK T LG G S G+P I D C NPK++R R S+ + + + ++D Sbjct: 1 MKSPIFITFLGTGTSQGIPVIGSDHPVCLSKNPKDKRLRVSVLL-----QWDDFNYVIDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + +DAVL TH H+DH GID +R + +Q + YA + L++ Sbjct: 56 GPDFRTQMLLNNIKHLDAVLLTHDHSDHTAGIDDIRPFCFRQGGDVTFYAEQNVYNALYK 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + P + +IEN + + GG + PI H + LG+R G Sbjct: 116 RFEYIFVTENKYPGAPTIKEELIEN----LTPFNIGGK-KVTPIRAMHNVLPVLGYRVGG 170 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Y TDV +EK++ L+++AL+ H SH +LSE+L+ IE++ P+ A LTH+ Sbjct: 171 FTYLTDVKTISDSEIEKIKGTKVLVVNALREEPHVSHLTLSEALELIEIVKPEKAYLTHI 230 Query: 241 HVDLDY-DMVLKSTPSRVVPAFDGMQFS 267 L + D V P V A+DG++ Sbjct: 231 SHWLGFHDEVEARLPENVHLAYDGLKIE 258 >gi|86133744|ref|ZP_01052326.1| metallo-beta-lactamase superfamily protein [Polaribacter sp. MED152] gi|85820607|gb|EAQ41754.1| metallo-beta-lactamase superfamily protein [Polaribacter sp. MED152] Length = 260 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 136/272 (50%), Gaps = 23/272 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K T LG G S G+P I C + K++R RSS+ IS + + ++D G Sbjct: 5 KKQLEITFLGTGTSQGIPMIASKDPVCLSDDVKDKRLRSSILIS-----WDDVSYVIDCG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q++RE V ++ VL+TH HADH G+D LR Y K + +Y +K L + Sbjct: 60 PDFRQQMIREDVQLVNGVLFTHEHADHTAGLDDLRPYCYKIGE-MPIYLNARTLKSLEQR 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIEN-----NDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F Y F + P V P +++ NDV I IP+ HGR+ + Sbjct: 119 FEYIFSKENRYPGAPSVEPTIVDKDPFFINDVTI-----------IPLEVMHGRLPVTSY 167 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R + AY TDV E +KLQNLD L+++AL+ H +HF+L E+L + + PK Sbjct: 168 RIQDFAYLTDVKFVVEEEKKKLQNLDVLVVNALRIEEHPTHFNLQEALDFVAELKPKRTY 227 Query: 237 LTHMHVDLDY-DMVLKSTPSRVVPAFDGMQFS 267 TH+ L + + V + P V AFDG++ + Sbjct: 228 FTHISHKLGFHEEVSNNLPENVFLAFDGLKIT 259 >gi|146300197|ref|YP_001194788.1| beta-lactamase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154615|gb|ABQ05469.1| beta-lactamase domain protein [Flavobacterium johnsoniae UW101] Length = 254 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 141/268 (52%), Gaps = 16/268 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK Y+ LG G S G+P I D C T+ K++R R S+ I+ + ++D Sbjct: 1 MKVYF----LGTGTSQGIPIIGIDHPVCKSTDAKDKRLRVSIWIT-----WEEHSYVIDC 51 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L +DA+L+TH H+DH G+D +R + +Q I +Y + +L Sbjct: 52 GPDFRQQMLSCGCRKLDAILFTHEHSDHTAGLDDIRPFNFRQGE-IPIYGHKRVLDNLRR 110 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F+ ++ P V I ++NN+ P A G AIPI HG + G+R + Sbjct: 111 RFDYVFETVNKYPGAPSVKTIEVKNNE-PF----AVGDKTAIPINAMHGDLQVFGYRIQD 165 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TDV ++KL+ L L+++AL+ H +HF+L E+L I L+ P+ A LTH+ Sbjct: 166 FAYLTDVKTIEQAEIDKLKGLKVLVVNALRVEPHDTHFNLQEALDFINLVKPEKAYLTHI 225 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 HV ++ V K P V A+D ++ + Sbjct: 226 SHVLGFHEEVQKQLPENVFLAYDNLEIT 253 >gi|85374074|ref|YP_458136.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] gi|84787157|gb|ABC63339.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] Length = 255 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 128/264 (48%), Gaps = 17/264 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVPRI GDWG CDP P+NRR+R S+ + E V+VDT D Q Sbjct: 5 MLGTGTSTGVPRINGDWGDCDPNEPRNRRSRVSILL----ENKQGQRVLVDTSTDLRAQF 60 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + S+D V +TH HADH HGID LR + + P+ +A+ +L + F + F Sbjct: 61 LANGITSLDGVFWTHDHADHCHGIDDLRSFRYGRSAPLPGFASERTCANLRKRFSFVFAG 120 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYC 184 + YP IV+ ++ D G +P HG S GF F + + Y Sbjct: 121 --EHGYPTIVS---LQELDRQAMHAGFGLSWVEMP----HGPTYSTGFVFESDGKTIGYA 171 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + L+ + +D L+ D L+ H +H L +L+ + K ILTHM + Sbjct: 172 TDFSEITDAMLDTFKGIDILVCDCLRREPHPTHAHLGMALQFKQRTKAKRMILTHMDKSM 231 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + P V+ +DG++ + Sbjct: 232 DYRSLCDEVPKDVIVGYDGLEVEA 255 >gi|15604699|ref|NP_221217.1| hypothetical protein RP869 [Rickettsia prowazekii str. Madrid E] gi|3861394|emb|CAA15293.1| unknown [Rickettsia prowazekii] gi|292572535|gb|ADE30450.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia prowazekii Rp22] Length = 249 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 16/259 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCGAS+GVP I + C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TVLGCGASIGVPVIGCECSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y + + L F Y F Sbjct: 60 LLREKINKLDCAILTHGHSDHVNGIDDLRVFTFMQDKPFEIYTDYNSVAQLHAKFDYLFN 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ + K IE Q HG I SLG R G+ Y DV Sbjct: 120 LCK-----------LLATKSINFFDKIKINTIEVQFFRQHHGPIDSLGLRIGDFVYSPDV 168 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L E NP+ +LT+M +DY Sbjct: 169 IGFPPESEKFLKDIKIWILDCMDYRSNPNHAGLDKVLAWREKYNPEEILLTNMRHTIDYH 228 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + K P+ V P +DG +F Sbjct: 229 EIKKVLPNNVKPLYDGYKF 247 >gi|88606837|ref|YP_505618.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] gi|88597900|gb|ABD43370.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] Length = 263 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/270 (36%), Positives = 142/270 (52%), Gaps = 23/270 (8%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S+GVP + + G C +P N+RTR+S I E+GS T +++D PD +Q Sbjct: 4 TILGCGSSVGVPSVGCECGVCASEHPHNKRTRTSALI----EKGS-TRLLIDASPDLRIQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF- 126 LR+ ++DAVL+TH HADH GI L+ + K I VY+ + + S Y F Sbjct: 59 ALRQNFYTMDAVLFTHCHADHTTGISELQAFTPKVGYHIPVYSDFGTLALITASNAYLFI 118 Query: 127 ----KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-V 181 A + + VNP V N + I G + I Q HG ++S GF F N V Sbjct: 119 PSTPGAPWKKCHYLTVNP-VRHNVEFNI------GEFSIMAIKQSHGEVNSNGFIFDNSV 171 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AYCTDV +FP S E+L+N +I L+ +H + ++ I + P A+ THM Sbjct: 172 AYCTDVKSFPEASWERLRNKHMIIFGCLRYQAVGAHAHVDLCIEWIRELKPHIAVFTHMS 231 Query: 242 VDLDYDMVL-----KSTPSRVVPAFDGMQF 266 D+DY+ +L K +VV A DG++ Sbjct: 232 HDIDYEQLLDYLHSKLPGQKVVVAHDGLEL 261 >gi|157965018|ref|YP_001499842.1| beta-lactamase superfamily hydrolase [Rickettsia massiliae MTU5] gi|157844794|gb|ABV85295.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia massiliae MTU5] Length = 256 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 7 TILGCGASIGVPVIRCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 61 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 62 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 120 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y DV Sbjct: 121 --NNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDV 175 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 176 IDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 235 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 236 EITKMLPNNVKPLYDGYKFT 255 >gi|15893265|ref|NP_360979.1| PhnP protein [Rickettsia conorii str. Malish 7] gi|15620485|gb|AAL03880.1| PhnP protein [Rickettsia conorii str. Malish 7] Length = 254 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y +D+ Sbjct: 119 --NNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSSDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESDKFLKDIKIWILDCMDYKSNPNHTGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|225012763|ref|ZP_03703197.1| beta-lactamase domain protein [Flavobacteria bacterium MS024-2A] gi|225003037|gb|EEG41013.1| beta-lactamase domain protein [Flavobacteria bacterium MS024-2A] Length = 254 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 138/264 (52%), Gaps = 16/264 (6%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 HF LG G S G+P I + C NPK++R R S+ I + + V+VD GPDF Sbjct: 5 HF--LGTGTSQGIPVIGSNHPVCLSPNPKDKRLRVSILI-----QWEHANVVVDCGPDFR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LR ++DAVL+TH HADH GID +R +F KQ I V+ + + +L + F Y Sbjct: 58 QQMLRVNCETLDAVLFTHEHADHTAGIDDIRPFFFKQGD-IPVFGSKRVLDNLSQRFDYI 116 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + YP + +V N V V+ +PI H +I LG+R + AY T Sbjct: 117 FSK--ENKYPGAPSVLV---NKVEAPFDFMNKVV--VPINVMHNQIPVLGYRIDDFAYLT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 DV +EKL+ LD L++ AL+ H +H +L E+L I+ I PK LTH+ H Sbjct: 170 DVKTIKPSEIEKLKGLDLLVLSALQIKTHPNHLNLDEALNLIQKIAPKRCYLTHISHFMG 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 +D V + P V A+D + +S Sbjct: 230 FHDEVSEKLPPNVFLAYDTLTITS 253 >gi|225619247|ref|YP_002720473.1| metal-dependent hydrolase [Brachyspira hyodysenteriae WA1] gi|225214066|gb|ACN82800.1| metal-dependent hydrolase [Brachyspira hyodysenteriae WA1] Length = 252 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 12/257 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C + +++RTRSS+ I R +N +VDT DF Q Sbjct: 4 TFLGTGTSDGVPMIGCKCKVCTSKDKRDKRTRSSILI-----RHNNKNYVVDTSADFRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE+V S++AV YTH HADH GI LR ID Y D M +L E + + F Sbjct: 59 MLREKVDSLEAVFYTHSHADHTSGIVDLRSLNFIMHTSIDCYGNKDTMDNLREKYDFFFN 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V IEN + I+ PI +HG ++ LG+RF N Y TD Sbjct: 119 PVQIGGGLPQVVFHHIEN-------EMMFDDIKVTPIAVKHGVLNILGYRFNNFTYITDA 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + ESL+ ++ + L+++ L+ H +H SL ES+ + + K A THM D+ + Sbjct: 172 SHISDESLKLIEGTEILVLNGLRYRQHHTHLSLQESVNIADKLGVKKAYFTHMTHDVLHR 231 Query: 248 MVLKSTPSRVVPAFDGM 264 + K P + PA+DG+ Sbjct: 232 NLEKELPPNMYPAYDGL 248 >gi|149184559|ref|ZP_01862877.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] gi|148831879|gb|EDL50312.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] Length = 255 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 129/263 (49%), Gaps = 17/263 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVPR+ DWG CDP PKNRRTR S+ + E + ++VDT D Q+ Sbjct: 5 MLGSGTSAGVPRVGNDWGQCDPNEPKNRRTRVSI----IVENDAGQRILVDTATDLRAQL 60 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DAV +TH HADH HGID LR + P+ +A + L F Y F+ Sbjct: 61 LANNIDKVDAVFWTHDHADHCHGIDDLRVMRYDRSNPLPGFAGRVACERLRRRFDYIFEG 120 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 YP IV + E + + AG + + + HG + S GFRF +V Y Sbjct: 121 --QFGYPTIV--YLKETSQAQMV---AGFTFDDVEM--PHGPVKSTGFRFEADGKSVVYA 171 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + ++ + D L++D L+ H +H L +L + K +LTH+ + Sbjct: 172 TDFSEITPAMVKCFRGCDLLVVDCLRERPHPTHAHLEMALDLARCVKAKRTVLTHLDKSM 231 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 DY + P V+ +DG++ + Sbjct: 232 DYATISAKVPKGVLVGYDGLEVA 254 >gi|296127513|ref|YP_003634765.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] gi|296019329|gb|ADG72566.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] Length = 252 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 131/258 (50%), Gaps = 12/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C + +++RTRSS+ I +N IVDT DF Q Sbjct: 4 TFLGTGTSDGVPMIGCKCKVCKSRDKRDKRTRSSILIQH-----NNKNYIVDTSADFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + S++AV YTH HADH GI LR ID Y D M L E + Y F Sbjct: 59 MLRENIGSLNAVFYTHAHADHTSGIVDLRSLNFIMHTSIDCYGNKDTMDTLREKYDYFFN 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V IEN + I+ PI +HG ++ LG+RF N Y TD Sbjct: 119 PVQIGGGLPQVVFHHIEN-------EMFFDDIKVTPIAVKHGILNILGYRFNNFTYITDA 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 ++ ESL+ ++ + L+++ L+ H +H SL ES+ + + K A THM D+ + Sbjct: 172 SSISDESLKLIEGTEILVLNGLRYRPHHTHLSLQESVNIADKLGVKKAYFTHMTHDVLHR 231 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + + PS + PA+DG++ Sbjct: 232 HLERELPSNMHPAYDGLK 249 >gi|313207204|ref|YP_004046381.1| metal-dependent hydrolase of the beta-lactamase superfamily i; phnp protein [Riemerella anatipestifer DSM 15868] gi|312446520|gb|ADQ82875.1| metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Riemerella anatipestifer DSM 15868] gi|325335357|gb|ADZ11631.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Riemerella anatipestifer RA-GD] Length = 261 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 17/260 (6%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P I + C NPK++R RSS I+ +N +++D GPDF Q+L Sbjct: 12 LGTGTSQGIPVIGSNHPVCLSQNPKDKRLRSSAIITT----NNNKKILIDCGPDFRQQML 67 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 IDA+L TH H DHI G+D LR + I +Y + + F Y F Sbjct: 68 SFGESHIDALLVTHEHNDHIIGLDDLRPIIFNTNKNIPIYCLERVSNEIIQRFPYAFAT- 126 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YP P + I N + G +IE I +L HG++ LG++ GN+AY TD Sbjct: 127 --EKYPGAPSFDLYKITNQPFELL----GTLIEPIEVL--HGKLPILGYKIGNLAYITDA 178 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ + LEKL+NLD LII+ L+ H+SHF L + L+ +E + PK LTH+ L + Sbjct: 179 SSISKDQLEKLKNLDILIINCLRAEEPHASHFILPQVLELVETLKPKTTYLTHISHRLGF 238 Query: 247 DMVLKS-TPSRVVPAFDGMQ 265 ++S P + PA DG++ Sbjct: 239 HNEIESLLPPHIKPAHDGLE 258 >gi|313674947|ref|YP_004052943.1| metal-dependent hydrolase [Marivirga tractuosa DSM 4126] gi|312941645|gb|ADR20835.1| metal-dependent hydrolase [Marivirga tractuosa DSM 4126] Length = 253 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D C + +++RTR+S+ I +++ DTGPDF Q Sbjct: 4 TFLGTGTSQGVPVIACDCEVCRSLDYRDKRTRTSIHIEI-----EGKSIVFDTGPDFREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE+V ++DAV+YTH H DH G+D +R Y KQ + VY ++ + F Y F Sbjct: 59 MLRERVSNLDAVVYTHEHKDHTAGLDDVRSYNFKQDMDMPVYGRKQVLEQIQREFAYIFA 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 A YP I + E + P ++ I+ +PI H ++ G+R + Y TDV Sbjct: 119 A---NKYPGIPKVKLHEIENKPFQVEG----IDILPINVMHYKLPVFGYRIKDFTYITDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 N P E EK++ L++ AL+ H SHF+L +++ +E + A HM H + Sbjct: 172 NHIPEEEKEKIRGSKILVLSALQKKSHLSHFNLEQAIAMVEELEIPQAYFIHMGHRMGLH 231 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + + P + A+DG+Q Sbjct: 232 RNIEEELPEGMELAYDGLQIE 252 >gi|315022394|gb|EFT35421.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Riemerella anatipestifer RA-YM] Length = 255 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 17/260 (6%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P I + C NPK++R RSS I+ +N +++D GPDF Q+L Sbjct: 6 LGTGTSQGIPVIGSNHPVCLSQNPKDKRLRSSAIITT----NNNKKILIDCGPDFRQQML 61 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 IDA+L TH H DHI G+D LR + I +Y + + F Y F Sbjct: 62 SFGESHIDALLVTHEHNDHIIGLDDLRPIIFNTNKNIPIYCLERVSNEIIQRFPYAFAT- 120 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YP P + I N + G +IE I +L HG++ LG++ GN+AY TD Sbjct: 121 --EKYPGAPSFDLYKITNQPFELL----GTLIEPIEVL--HGKLPILGYKIGNLAYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ + LEKL+NLD LII+ L+ H+SHF L + L+ +E + PK LTH+ L + Sbjct: 173 SSISKDQLEKLKNLDILIINCLRAEEPHASHFILPQVLELVETLKPKTTYLTHISHRLGF 232 Query: 247 DMVLKS-TPSRVVPAFDGMQ 265 ++S P + PA DG++ Sbjct: 233 HNEIESLLPPHIKPAHDGLE 252 >gi|34581068|ref|ZP_00142548.1| PhnP protein [Rickettsia sibirica 246] gi|28262453|gb|EAA25957.1| PhnP protein [Rickettsia sibirica 246] Length = 254 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y D+ Sbjct: 119 --NNKLFKL---GRLFTTQSVSFFDKIKVNTIEIQFFRQHHGPIDSLGLRMGDFVYSPDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|157826356|ref|YP_001494076.1| beta-lactamase superfamily hydrolase [Rickettsia akari str. Hartford] gi|157800314|gb|ABV75568.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Rickettsia akari str. Hartford] Length = 254 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 VVLGCGASIGVPVIGCDCSICASHSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P +Y D +L+ F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFKIYTDHDSTANLYTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 T + V K IE Q HG I SLG R G+ Y DV Sbjct: 119 -----TNKLFKLGRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESEKFLKDIKIWILDCMDYKSNLNHAGLDKVLEWREKYQPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYRFT 253 >gi|239948133|ref|ZP_04699886.1| PhnP protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239922409|gb|EER22433.1| PhnP protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 254 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I + N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSICTSPSKYNKRTRSAIYI-----KDENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQDKPFEIYTDHDSAAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y +DV Sbjct: 119 --NNKLFKF---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSSDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 F ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFLPESEKFLKDIKIWILDCMDYKSNPNHVGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|325954959|ref|YP_004238619.1| beta-lactamase [Weeksella virosa DSM 16922] gi|323437577|gb|ADX68041.1| beta-lactamase domain protein [Weeksella virosa DSM 16922] Length = 256 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 29/268 (10%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D +P+++R RSS + + + T V+VD PDF Q Sbjct: 5 TFLGTGTSQGVPVIASDHPVNFSNDPRDKRLRSSFMVEK-----NETRVVVDCSPDFRYQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE V ++DA+++TH H DH+ GID R K KR + +Y P + + F Y F Sbjct: 60 MLRENVQNLDAIVFTHEHNDHVLGIDDTRPLIFKAKRDLPIYGLPRVLNQIRVRFPYIF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGV-------IEAIPILQQHGRISSLGFRF-G 179 D YP I P + A G+ I P+ HG +S LG+ F Sbjct: 119 --DGTKYPGI-----------PQVEEHAIGLEPFYINDIHIQPVEVMHGGLSILGYIFDK 165 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILT 238 +AY TDV + P ++LEKL+NLD L++ AL+ H +H L+++++ + + PK T Sbjct: 166 KIAYLTDVKSLPEKTLEKLENLDVLVLSALRQENPHHAHLLLADAIEITQKLQPKQTYFT 225 Query: 239 HMHVDLD-YDMVLKSTPSRVVPAFDGMQ 265 H+ V++ Y+ V P + A+D MQ Sbjct: 226 HISVEMGFYEEVNSLLPKGMDLAYDKMQ 253 >gi|229587238|ref|YP_002845739.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia africae ESF-5] gi|228022288|gb|ACP53996.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia africae ESF-5] Length = 254 Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTNHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y D+ Sbjct: 119 --NNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|238651114|ref|YP_002916972.1| beta-lactamase superfamily hydrolase [Rickettsia peacockii str. Rustic] gi|238625212|gb|ACR47918.1| beta-lactamase superfamily hydrolase [Rickettsia peacockii str. Rustic] Length = 254 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y D+ Sbjct: 119 --NNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|86142222|ref|ZP_01060732.1| hydrolase, metal-dependent [Leeuwenhoekiella blandensis MED217] gi|85830974|gb|EAQ49431.1| hydrolase, metal-dependent [Leeuwenhoekiella blandensis MED217] Length = 230 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 12/238 (5%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIH 90 T+P+++R R S+ I G+N ++D GPDF Q+L +V ++A+L+TH HADH Sbjct: 3 TDPRDKRLRVSILIEF---EGAN--YVIDCGPDFRQQMLSNKVTHLEALLFTHEHADHTA 57 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G+D +R +F +Q I +YA + L + F Y F+ + P V + NN + Sbjct: 58 GLDDIRPFFFRQG-DIPIYAHQRVLDELKKRFEYIFETENRYPGAPAVEVYEVTNN---V 113 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 + +E + ++ HG++ G+RFGN AY TDV AE EKL++LD L+++AL+ Sbjct: 114 SFEINDLHVEPVNVM--HGKLQVFGYRFGNFAYLTDVKTIAAEEKEKLRDLDVLVVNALR 171 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 H SHF+L E+L +E I PK TH+ H+ + V K P V A+DG+Q Sbjct: 172 EEPHYSHFNLEEALAFVEEIKPKKTYFTHISHLLGFHAEVEKQLPENVHLAYDGLQLE 229 >gi|157829178|ref|YP_001495420.1| PhnP protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933906|ref|YP_001650695.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] gi|157801659|gb|ABV76912.1| PhnP protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908993|gb|ABY73289.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] Length = 254 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 11/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS+GVP I D C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y F Sbjct: 60 LLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDYLF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +++ + + V K IE Q HG I SLG R G+ Y D+ Sbjct: 119 --NNKLFKL---GRLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYSPDL 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M +DY Sbjct: 174 IDFPHESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTIDYH 233 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K P+ V P +DG +F+ Sbjct: 234 EITKMLPNNVKPLYDGYKFT 253 >gi|313202614|ref|YP_004041271.1| hydrolase [Paludibacter propionicigenes WB4] gi|312441930|gb|ADQ78286.1| putative hydrolase [Paludibacter propionicigenes WB4] Length = 248 Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 136/261 (52%), Gaps = 22/261 (8%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I C T+ K++R R+S+ I R + +++D GPD Q+L Sbjct: 6 LGTGTSTGVPEIGCKCETCLSTDIKDKRLRASVLI-----REGESQILIDAGPDLRQQIL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 ++ + VL TH H DHI GID LR Q +YA + + ++ YCF Sbjct: 61 TYKIDKLSGVLITHEHYDHIGGIDDLRPLGKSQ-----IYAEKKVCEVIQKNMPYCF--- 112 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ YP PI+ + E D P + + IE PI H R+ GFR GN AY TDV Sbjct: 113 GEKRYPGSPIIE--LHEITDKPFYVNN----IEIQPIRVMHARLPIFGFRVGNFAYLTDV 166 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 S+EKL+NLD L+++AL+ H SH SLSE+L+ + I K THM+ + + Sbjct: 167 KTIEESSIEKLRNLDILVLNALRPAPHMSHISLSEALEITKKIGAKKTFFTHMNHHMGFH 226 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++V + P + A+DG++ Sbjct: 227 NLVNQQLPENIQLAYDGLELK 247 >gi|120435804|ref|YP_861490.1| metallo-beta-lactamase domain-containing protein [Gramella forsetii KT0803] gi|117577954|emb|CAL66423.1| metallo-beta-lactamase domain protein [Gramella forsetii KT0803] Length = 253 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I + C + K++R R S+ I+ ++ +++D GPDF Q Sbjct: 4 TFLGTGTSQGIPIIGSEHPVCLSNDSKDKRLRVSILIT-----WNDLNILIDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DA+ YTH H DH G+D +R +F +Q I V+A + L + F Y F Sbjct: 59 MLANNVQKLDAIFYTHEHNDHTAGLDDIRPFFFRQG-DIPVFAHQRVLTALRKRFDYIFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V +IEN P + P+ H R+ GFR + AY TD+ Sbjct: 118 TENKYPGAPGVTEHIIENK--PFSFHG----LTVTPVEFMHNRLQVFGFRVEDFAYLTDL 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + +EKL++L L++ AL+ H SHF+L E+L+ IE + P+ A LTH+ H+ + Sbjct: 172 KTIEEQEIEKLRDLKVLVVSALRIEPHHSHFNLEEALEFIEKVQPEKAYLTHISHMLGFH 231 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 + V K P+ V A+D ++ + Sbjct: 232 EEVEKDLPANVHLAYDNLKIT 252 >gi|269925256|ref|YP_003321879.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269788916|gb|ACZ41057.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 252 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG GAS GVP + C NP+N+RTR+S + +S G N +++D PDF Sbjct: 5 LTFLGTGASFGVPMLGCKCRVCRSNNPRNKRTRTS---ALISFDGHN--ILIDASPDFRC 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q L V S+DAVL+TH HADH GID LR + L++ PI Y ++ + F Y F Sbjct: 60 QALINNVDSLDAVLFTHSHADHTFGIDDLRAFSLRE--PITCYGDESTVEAIRRRFDYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P + I+NN + +G +E +P+ +HG + F +AY TD Sbjct: 118 SPTPHLGSRPKLRLHSIKNN-----FRVSG--LEFVPLPIRHGLDCITAYMFEGIAYITD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + P +L++++++D L+++AL+ H+ H L +++ + + + L H+ DLDY Sbjct: 171 ASEIPEVTLQRIKSVDVLVLNALRFEPHAMHLGLWQAVDLAKTVGAERTYLVHLGHDLDY 230 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 D V P V A+DG+Q Sbjct: 231 DEVSSMLPDGVQLAYDGLQ 249 >gi|221633349|ref|YP_002522574.1| hypothetical protein trd_1369 [Thermomicrobium roseum DSM 5159] gi|221156705|gb|ACM05832.1| conserved protein [Thermomicrobium roseum DSM 5159] Length = 254 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 21/264 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S G+P I C +P++RRTRSS + + E V++DT P+ + Sbjct: 4 LTFLGTGTSNGIPVIGCRCRTCTSVDPRDRRTRSS-AVLHLGEH----NVLIDTAPELRL 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q + + I+AVL+TH HADHI G D LR + + P+ +YA P+ + L + Y F Sbjct: 59 QAIATGLSHIEAVLFTHAHADHIAGFDDLRQFNYLAQAPLPIYADPETARELRVRYSYAF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNV 181 P+ + + G E +PI HGR + GFR G + Sbjct: 119 S-----------EPLPFYGGKPDLRLHEFDGPFHLFGYEIVPIPVDHGRWTVYGFRCGPI 167 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD PA S+E L+ ++ L+++AL++ H +H SL+E+L IE + P+ A LTH+ Sbjct: 168 AYVTDAKTVPARSIELLRGVNVLVLNALRDRPHPTHLSLAEALTIIEQVCPERAYLTHVS 227 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQ 265 ++ + P V A+DG+Q Sbjct: 228 HEVMHADWSAKLPPGVQLAYDGLQ 251 >gi|298208482|ref|YP_003716661.1| hydrolase, metal-dependent [Croceibacter atlanticus HTCC2559] gi|83848405|gb|EAP86274.1| hydrolase, metal-dependent [Croceibacter atlanticus HTCC2559] Length = 253 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 135/263 (51%), Gaps = 17/263 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C N K++R R S+ I G N +++D GPDF Q Sbjct: 4 TYLGTGTSQGIPIIGSTHPVCLSENIKDKRLRVSVLIEI---NGKN--IVIDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + +DA+++TH H+DH G+D +R +F KQ I++Y L + F Y F+ Sbjct: 59 MLTNPIPRLDAIVFTHEHSDHTAGLDDIRPFFFKQG-AINLYGNERVFNSLKQRFAYIFE 117 Query: 128 ALDDRTYPP--IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + P ++NPI + P + I IPI H + G+R N AY T Sbjct: 118 TENKYPGAPDVVLNPI----KNKPFMVNG----ISIIPIRVLHNTLPVFGYRIENFAYIT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 DV P E L KL+NL+ L I AL+ H+SHF+L E+L +E + PK A TH+ H+ Sbjct: 170 DVKTVPDEELHKLKNLEVLTISALRIEPHASHFNLEEALSFVEKVKPKKAYFTHISHLLG 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 +D V P + A+D ++ + Sbjct: 230 FHDEVESQLPDHIHLAYDNLKIT 252 >gi|110639169|ref|YP_679378.1| metal-dependent hydrolase [Cytophaga hutchinsonii ATCC 33406] gi|110281850|gb|ABG60036.1| metal-dependent hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 13/258 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C + +++R R+S+ I +++DTGPDF Q Sbjct: 5 TFLGTGTSQGIPVIACACEVCKSFDYRDKRLRTSVFIE-----TDKVKLVIDTGPDFRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ ++DA+L+TH H DHI G+D +RG+ QKR + VYA + + L F Y F Sbjct: 60 MLRERIKNLDAILFTHEHKDHIAGLDDVRGFNYAQKRDMPVYARHNVIDSLKREFAYIFA 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YP I + E + P ++ + IPI H ++ GFR + Y TD Sbjct: 120 ---EYQYPGIPRIDIHELKNEPFEIQGE----KIIPIEVMHFKLPVFGFRIQDFTYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 N +EK++ ++++AL+ H SH++L ++++ I+ INP+ A HM H Sbjct: 173 NFISDTEIEKIKGSKIVVLNALQKEAHVSHYTLEQAIEVIKHINPEQAYFVHMGHRMGKQ 232 Query: 247 DMVLKSTPSRVVPAFDGM 264 V K P + A+DG+ Sbjct: 233 ADVEKELPHNMHFAYDGL 250 >gi|261749134|ref|YP_003256819.1| metal-dependent hydrolase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497226|gb|ACX83676.1| metal-dependent hydrolase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 254 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 14/259 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C NPK++R RSS+ I E+G ++D PDF Q Sbjct: 4 TFLGTGTSQGVPIIGSTHPVCLSKNPKDKRLRSSILI----EKGKKV-FLIDCSPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR +DA+L TH H DHI G+D +R + +++PI VY ++ L + F Y F Sbjct: 59 MLRSNHQKLDAILITHEHQDHIGGLDEIRS--INREKPIPVYGLRRVLESLKKRFYYIFS 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 I + D + + P+ HG + LGFR N AY TD Sbjct: 117 ENKKSNTSKISIHELDNYTDFFVV-----EYFKVFPLSIWHGLLPILGFRIENFAYITDA 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-HVDLD 245 + P ++++L+ LD L+++ L+ HSSHF+LS+SLK I+ INPK LTH+ H+ Sbjct: 172 SRIPFHTIQQLKGLDILVLNVLRKVPKHSSHFTLSDSLKMIQEINPKKTYLTHISHLLGF 231 Query: 246 YDMVLKSTPSRVVPAFDGM 264 ++ V P V A+DG+ Sbjct: 232 HEEVQTQLPKNVYLAYDGL 250 >gi|53714274|ref|YP_100266.1| putative hydrolase [Bacteroides fragilis YCH46] gi|52217139|dbj|BAD49732.1| metal-dependent hydrolase [Bacteroides fragilis YCH46] Length = 252 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 18/262 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP I C +P++ R R+S + + T+++D GPDF Q+ Sbjct: 5 ILGSGTSTGVPEIGCTCAVCTSKDPRDYRLRTSALVYT-----DDATILLDCGPDFREQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR IDAVL +H H DH+ G+D LR + + PI YA + L YCF Sbjct: 60 LRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPI--YAETYTAERLRSRMPYCFV- 116 Query: 129 LDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YP + N P+ + P + E +P+ HG++ LG+R G + Y TD+ Sbjct: 117 --EHSYPGVPNIPLREIEPNRPFLVNHT----EVLPLRVMHGKLPILGYRIGKLGYITDM 170 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDLD 245 P ES E+LQ ++ L+++AL+ H++H SLSE+L+ ++ I K L HM H+ L Sbjct: 171 LTMPDESFEQLQGIEVLVMNALRIAPHNTHQSLSEALEAVKRIGAKETWLIHMSHHIGLQ 230 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 D V K P V AFDG++ Sbjct: 231 AD-VEKQLPPHVHFAFDGLELE 251 >gi|51474038|ref|YP_067795.1| phosphonate metabolism protein PhnP [Rickettsia typhi str. Wilmington] gi|51460350|gb|AAU04313.1| phosphonate metabolism protein PhnP [Rickettsia typhi str. Wilmington] Length = 249 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 16/259 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCGAS+GVP I + C + N+RTRS++ I+ N+ ++VD G D Q Sbjct: 5 TVLGCGASIGVPVIGCECSTCTSPSQYNKRTRSAIYIN-----DENSQILVDFGFDIRNQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D + TH H+DH++GID LR + Q + ++Y + + L F Y F Sbjct: 60 LLREKINKLDCAILTHGHSDHVNGIDDLRVFTFMQDKTFEIYTDHNSVAKLHTKFDYLFN 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ + K IE Q HG I SLG R G+ Y DV Sbjct: 120 MCK-----------LLATKSINFFDKIKINTIEVQFFRQHHGPIDSLGLRIGDFVYSPDV 168 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 FP ES + L+++ I+D + + +H L + L E NP+ +LT+M +DY Sbjct: 169 IGFPPESEKFLKDIKIWILDCMDYRSNPNHAGLDKVLAWREKYNPEEILLTNMRHTIDYH 228 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + K P V P +DG +F Sbjct: 229 EIKKVLPKNVKPLYDGYKF 247 >gi|309792277|ref|ZP_07686749.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308225818|gb|EFO79574.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 242 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 13/254 (5%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 +GVP I D C +P+NRR R+S + R S+ T+++D GPDF +Q L + Sbjct: 1 MGVPVIGCDCAVCSSADPRNRRMRTSALL-----RTSDHTILIDAGPDFRLQALHAGLRH 55 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 IDAVL TH H DHI GID LR + + ++ +P + + F Y F + Sbjct: 56 IDAVLLTHAHFDHIAGIDDLRP-LTEHGDCLPIFGSPHTIHEVRSRFDYAFTETSAGSTC 114 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 P + +E++ A G P+ HG +R G + Y TD + P +S Sbjct: 115 PRIELHSVESS-------FAIGQTSITPLAIIHGTWEITAYRIGGLGYVTDASHIPPDSY 167 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 E L+NLD L+++AL+ H +HF+L+E+L+ I + P+ A L HM D+ P Sbjct: 168 EGLRNLDVLVLNALRYEAHPTHFTLAEALEVIRDLQPRRAFLVHMTHAFDHASASAQLPE 227 Query: 256 RVVPAFDGMQFSSP 269 V A+DG++ P Sbjct: 228 GVAFAYDGLEIEIP 241 >gi|255010441|ref|ZP_05282567.1| putative hydrolase [Bacteroides fragilis 3_1_12] gi|313148245|ref|ZP_07810438.1| hydrolase [Bacteroides fragilis 3_1_12] gi|313137012|gb|EFR54372.1| hydrolase [Bacteroides fragilis 3_1_12] Length = 252 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 136/262 (51%), Gaps = 18/262 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP I C +PK+ R R+S + + + T+++D GPDF Q+ Sbjct: 5 ILGSGTSTGVPEIGCTCAVCTSKDPKDHRLRTSALV-----QTGDATLLLDCGPDFREQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L IDAVL +H H DH+ G+D LR + + PI YA + L YCF Sbjct: 60 LHVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPI--YAETYTAERLRSRMPYCFV- 116 Query: 129 LDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + TYP + N P+ + P + E +P+ HG++ LG+R G + Y TD+ Sbjct: 117 --EHTYPGVPNIPLREIEPNRPFLVNHT----EVLPLRVMHGKLPILGYRIGKLGYITDM 170 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDLD 245 P ES E+LQ +D L+++AL+ H++H SLSE+L+ ++ I K HM H+ L Sbjct: 171 LTMPDESFEQLQGVDVLVMNALRVAPHNTHQSLSEALEAVKRIGAKETWFIHMSHHIGLQ 230 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 D V K P V AFDG++ Sbjct: 231 AD-VEKLLPPHVHFAFDGLEIE 251 >gi|60682330|ref|YP_212474.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|253564790|ref|ZP_04842246.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|265766234|ref|ZP_06094275.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|60493764|emb|CAH08554.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|251946255|gb|EES86632.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|263253902|gb|EEZ25367.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|301163804|emb|CBW23359.1| putative hydrolase [Bacteroides fragilis 638R] Length = 252 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 18/262 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP I C +P++ R R+S + + T+++D GPDF Q+ Sbjct: 5 ILGSGTSTGVPEIGCTCAVCTSKDPRDCRLRTSALVYT-----DDATILLDCGPDFREQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR IDAVL +H H DH+ G+D LR + + PI YA + L YCF Sbjct: 60 LRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRFGEVPI--YAETYTAERLRSRMPYCFV- 116 Query: 129 LDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YP + N P+ + P + E +P+ HG++ LG+R G + Y TD+ Sbjct: 117 --EHSYPGVPNIPLREIEPNRPFLVNHT----EVLPLRVMHGKLPILGYRIGKLGYITDM 170 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDLD 245 P ES E+LQ ++ L+++AL+ H++H SLSE+L+ ++ I K L HM H+ L Sbjct: 171 LTMPDESFEQLQGIEVLVMNALRIAPHNTHQSLSEALEAVKRIGAKETWLIHMSHHIGLQ 230 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 D V K P V AFDG++ Sbjct: 231 AD-VEKQLPPHVHFAFDGLELE 251 >gi|312888267|ref|ZP_07747844.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] gi|311299298|gb|EFQ76390.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] Length = 255 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 12/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D C + ++R RSS+ + ++VD+GPDF Q Sbjct: 4 TFLGTGTSQGVPVIACDCEVCTSADKHDKRLRSSIMVE-----SEGKVIVVDSGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR V +DA+++TH H DH+ G+D +R + KQ+ ID+YA L F Y F Sbjct: 59 MLRAHVTHLDAIVFTHEHKDHVAGLDDIRAFNYKQQSAIDIYATERVQAALKREFAYIFH 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P + + + + I G + PI H ++ LGFR G+ Y TD Sbjct: 119 EFKYPGIPQVDLHTIDDRHSFNI------GRVHITPIEAMHYKLPVLGFRIGDFTYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-DY 246 +EK++ L+I+AL+ H SHF+LSE++ + I + TH+ L + Sbjct: 173 KTITDTEIEKIKGTKILVINALQKENHISHFTLSEAIAFAQQIGAEQTYFTHISHRLGKH 232 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 V + P+ + A+DG++ Sbjct: 233 QDVSQLLPAGIYLAYDGLRL 252 >gi|300870043|ref|YP_003784914.1| metal-dependent hydrolase [Brachyspira pilosicoli 95/1000] gi|300687742|gb|ADK30413.1| metal-dependent hydrolase [Brachyspira pilosicoli 95/1000] Length = 252 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 127/258 (49%), Gaps = 12/258 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I C + +++RTRSS+ I N I+DT DF Q+L Sbjct: 6 LGTGTSDGVPMIGCKCNVCKSKDKRDKRTRSSVLIQH-----KNKNYIIDTSLDFREQML 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE+V S++AV YTH HADH GI LR R ID Y D M L + + Y F + Sbjct: 61 REKVDSLEAVFYTHHHADHSSGIVDLRSLNFMMHRHIDCYGNKDTMDVLEDKYNYIFNPV 120 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P + +IEN + I PI +HG ++ LG+RF N Y TD ++ Sbjct: 121 QIGGGIPDLEFHIIEN-------ATKFDDITVTPIPVKHGILNILGYRFNNFTYITDASS 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 ESL+ + + L+++ L+ HS+H SL ES+ + I K TH+ D+ + + Sbjct: 174 ISDESLKLIDGSEILVLNGLRYRPHSTHLSLQESVNIADTIKAKKTFFTHLTHDVLHKNL 233 Query: 250 LKSTPSRVVPAFDGMQFS 267 K P + A+DG+ Sbjct: 234 EKELPKSMYAAYDGLTLE 251 >gi|309389080|gb|ADO76960.1| beta-lactamase domain protein [Halanaerobium praevalens DSM 2228] Length = 252 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 14/259 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I D C NPKN+R R+S+ I + +++DT P+ + Sbjct: 3 ITFLGTGTSHGVPVIACDCKVCQSNNPKNKRMRTSIHI-----KSKEYNLLIDTPPEMRL 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 ++++ ++ +D+V TH HADH+ G D +R Q + + VYA ++++ F Y F Sbjct: 58 ELIKNKIKHVDSVFMTHAHADHLMGFDDIRALNWFQGKEMPVYADQKTLENIKRVFPYIF 117 Query: 127 -KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 K + P ++ ++ +K ++ PI HG+ L +R N AY T Sbjct: 118 TKKISGGGIPQVI----LKEMKTEFVLKD----LKVTPIPIYHGKNKILAYRINNFAYLT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D + P SLE L+ +++ IDAL+ H +H S+ +++K + +N K+ LTH+ +LD Sbjct: 170 DCSKIPKSSLELLKGIEYAAIDALRFKEHPTHMSVDQAVKLSQDLNLKHTYLTHISHNLD 229 Query: 246 YDMVLKSTPSRVVPAFDGM 264 ++ + P + PA+DG+ Sbjct: 230 HEKLKDYLPRNISPAYDGL 248 >gi|313159631|gb|EFR58989.1| metallo-beta-lactamase domain protein [Alistipes sp. HGB5] Length = 281 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 17/267 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I C ++ ++ R R+S + R +++D GPDF Sbjct: 23 LTFLGTGTSQGVPVIGCRCRVCTSSDRRDDRLRTSAMVETQGVR-----IVIDAGPDFRC 77 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP----IDVYAAPDCMKHLFESF 122 Q+LR V IDA+L TH H DHI G+D +R + P ID+YAAP + + + F Sbjct: 78 QMLRTGVRRIDAILLTHEHKDHIGGLDDVRAFNFVDYPPTIHRIDLYAAPHTLDVVRKDF 137 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNV 181 Y F R P I E +++ + + +E +P+ H R + GFR G + Sbjct: 138 DYAFAQDKYRGVPEI------ELHEIDVTRPFSVKGVEILPVSGHHSERFAVTGFRIGRL 191 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD +EKL LD L+++AL+ H SHF+++E+L+ I ++P+ A LTHM Sbjct: 192 AYLTDFKTIADAEVEKLTGLDVLVVNALRFAEHYSHFNVAEALELIARVSPREAYLTHMS 251 Query: 242 VDLDYDMVLKST-PSRVVPAFDGMQFS 267 D+ + T P V A+D ++ Sbjct: 252 HDIGLHAETEPTLPPHVHMAYDTLEIE 278 >gi|149275712|ref|ZP_01881857.1| metal-dependent hydrolase [Pedobacter sp. BAL39] gi|149233140|gb|EDM38514.1| metal-dependent hydrolase [Pedobacter sp. BAL39] Length = 254 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 17/264 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P IT C + KN+R R S+ I + T+++D+GPDF Q Sbjct: 4 TFLGTGTSQGIPVITCQCVVCQSDDHKNKRLRVSVLIET-----DDKTIVIDSGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR +V +DA+L+TH H DH+ G+D +R + K+ ID+YA L F Y F Sbjct: 59 MLRAKVKDLDAILFTHEHKDHVAGLDDIRPFNYLLKKNIDIYATERVQDALKREFSYIFS 118 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + YP P ++ I N I G E IP+ H ++ LG+R G+ Y T Sbjct: 119 ---EHHYPGLPQIDIHTITNEPFFI------GKTEIIPLDIMHYKLPILGYRIGDFTYIT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D S+EK+ L+++AL++ H SHF+L E++ I + TH+ +L Sbjct: 170 DAKTISETSVEKVMGTKILVVNALQHEQHISHFTLQEAIDFSARIGAEQTYFTHISHNLG 229 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K P V A+DG+ S Sbjct: 230 LHEDVEKELPKNVKLAYDGLTIFS 253 >gi|163755311|ref|ZP_02162431.1| metal-dependent hydrolase [Kordia algicida OT-1] gi|161324731|gb|EDP96060.1| metal-dependent hydrolase [Kordia algicida OT-1] Length = 254 Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 12/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I + C + +++R R S+ IS + ++D GPDF Q Sbjct: 4 TFLGTGTSQGIPIIGSNHPVCLSDDFRDKRLRVSILIS-----WDDAVYVIDCGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR ID +L+TH HADH G+D +R ++ +Q I +YA + F Y F+ Sbjct: 59 MLRANCNKIDGILFTHEHADHTAGLDDIRPFYFRQG-DIPMYAHKRVFGEFKKRFDYIFR 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V ++NN+ P ++ + +PI H ++ G+RF N AY TDV Sbjct: 118 TENKYPGAPGVIQYEVKNNE-PFQLQG----VTVMPINAWHYKLQVFGYRFDNFAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 AE +KL+ L L+++AL+ H SHFSL E+L+ I I P+ A LTH+ H+ + Sbjct: 173 KTMEAEERDKLKGLKVLVVNALRIEEHISHFSLEEALEFIAEIQPEKAYLTHISHLLGFH 232 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 V + P V A+D + + Sbjct: 233 AEVSEKLPENVFLAYDTLTIT 253 >gi|319954957|ref|YP_004166224.1| beta-lactamase domain protein [Cellulophaga algicola DSM 14237] gi|319423617|gb|ADV50726.1| beta-lactamase domain protein [Cellulophaga algicola DSM 14237] Length = 261 Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C N K++R R S+ +S N ++D GPDF Q Sbjct: 11 TFLGTGTSQGIPVIGSIHPVCLSENQKDKRLRVSVLVS-----WENFNYVIDCGPDFRQQ 65 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + +D +L+TH H+DH GID +R +F KQ I +YA +K L F Y F Sbjct: 66 MLENPIDQLDGILFTHEHSDHTAGIDDIRPFFFKQG-DIPIYAHERVIKSLKIRFDYIF- 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 A ++R YP +E +V G + IPI +H R+ G+R + AY TD+ Sbjct: 124 AHENR-YP---GAPAVEIKEVRNGTTFKIGNLNVIPIDIKHNRLQVFGYRLQDFAYLTDI 179 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + ++KL + L++ AL+ H SHF+L+E+L I I P+ A LTH+ H+ + Sbjct: 180 KTIEEQEIKKLNGVKVLVVSALRIEPHHSHFNLAEALAFIAKIKPEKAYLTHVSHLLGFH 239 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 D V K+ P V A+D ++ + Sbjct: 240 DEVQKTLPKNVYLAYDNLKIT 260 >gi|94969657|ref|YP_591705.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94551707|gb|ABF41631.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 260 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 14/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S+GVP I D C ++P +RR R S+ + V++DT PDF Sbjct: 5 LTVLGSGTSMGVPTIGCDCAVCSSSDPHDRRLRPSVMVQY-----DGKLVLIDTTPDFRE 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ---KRPIDVYAAPDCMKHLFESFR 123 Q LRE + IDA++YTH HADHI G+D +R + + +YA + L F+ Sbjct: 60 QALREGIKKIDAIVYTHGHADHILGLDDVRPLSFPRITGGARVPLYANEKTERVLKHVFK 119 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F DD + I + + I + A + IP+ HG G+RFG+ AY Sbjct: 120 YIFD--DDYKFGSIAQVEMHRVHHEAIELFGA----KFIPVPVIHGETEIYGYRFGSAAY 173 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD ++ P S+E L+ LD L +DAL++ H +H +L S+ E + K+ TH+ D Sbjct: 174 LTDFSSIPDASMEMLRGLDILFLDALRHKPHPTHSTLDNSVSIAEKLKAKHTYFTHISHD 233 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFS 267 L ++ + P+ + A DG++ Sbjct: 234 LPHEETNRQLPAGIQLAHDGLKLE 257 >gi|213963566|ref|ZP_03391819.1| metallo-beta-lactamase domain protein [Capnocytophaga sputigena Capno] gi|213953846|gb|EEB65175.1| metallo-beta-lactamase domain protein [Capnocytophaga sputigena Capno] Length = 253 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 137/258 (53%), Gaps = 13/258 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D TNPK++R R+S IS +T + +D PDF Q Sbjct: 4 TFLGTGTSQGVPVIASDHPVGKSTNPKDKRLRTSALIS-----WEHTNIAIDCSPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V ++A+L+TH HADH G+D +R F++ + + +Y + L F Y F Sbjct: 59 MLTNDVQHLEAILFTHEHADHTAGMDDIRP-FVRLQGDMPIYGLKRVINELRVRFAYIF- 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 A ++R Y + I E N P + G +++ I ++ HG + +G+R N AY TD Sbjct: 117 ATENR-YEGAPSVIAHEINSTPFSLH--GKIVQPIHVM--HGNLPIIGYRIENFAYITDA 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 + +EKL+ +D L+++ L+ H +H +LSE+L+ IE + PK LTH+ + Sbjct: 172 KYIEDKEIEKLKGVDTLVLNCLREQAHPTHLNLSEALEIIEQVKPKRTFLTHVSQTFGFH 231 Query: 247 DMVLKSTPSRVVPAFDGM 264 D + ++ P V A+D + Sbjct: 232 DEIQQNLPKNVFLAYDNL 249 >gi|119953316|ref|YP_945525.1| metal-dependent hydrolase [Borrelia turicatae 91E135] gi|119862087|gb|AAX17855.1| metal-dependent hydrolase [Borrelia turicatae 91E135] Length = 252 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 139/261 (53%), Gaps = 22/261 (8%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G+S GVP ++ D C KN+R RSS I+ +++DTGPD Q+L Sbjct: 6 LGTGSSSGVPMLSCDCRVCSLNFGKNKRLRSSFLINLYG-----MNLLIDTGPDIREQLL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE ++ +D VLYTH H DHI G+D ++ F + P+ +YA M+H+ +F + F + Sbjct: 61 RENIVKLDLVLYTHEHYDHIMGLDDIK--FYTRGAPLSIYARESTMQHIRNAFPHNFSS- 117 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + N +I N V + G I+ +PI HG I SLG+R N+AY TDV Sbjct: 118 -KVSISGKAN--IIPNLAVDLQQIFFRG-IKIMPIPLLHGDIISLGYRINNLAYLTDVKF 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH-----MHVDL 244 P S L+ LD L+IDAL+ H H + +++ +++ I+PK A TH MH + Sbjct: 174 IPEISYNYLKGLDVLVIDALRLKPHPGHLNFDDAIVEVKKIDPKIAYFTHISHDVMHEEF 233 Query: 245 DYDMVLKSTPSRVVPAFDGMQ 265 DY LK + A+DG+Q Sbjct: 234 DY---LKR--DNIYLAYDGLQ 249 >gi|85708670|ref|ZP_01039736.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] gi|85690204|gb|EAQ30207.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] Length = 260 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 138/271 (50%), Gaps = 22/271 (8%) Query: 7 FTILGCGASLGVPRITGDWGA-----CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 F +LG G S GVPRI G+ G CDP P+NRRTR S+ + E +++DT Sbjct: 3 FIMLGSGTSTGVPRIGGEDGEGDWGDCDPAEPRNRRTRVSILV----ESDEGRRLLIDTS 58 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D Q+L ++ IDAV +TH HADH HGID LR + PI YA+ + ++ L + Sbjct: 59 SDCRAQLLANRIDKIDAVFWTHDHADHCHGIDDLRVLRYGRGGPIPAYASTETVRRLRQR 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F Y F D YP I + +E + AG +E + +HG + G+RF Sbjct: 119 FGYVFAGQDG--YPTICSLETLERLKI-----VAGFGVEWCQM--EHGPGETTGYRFEAD 169 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 ++AY TD ++ E +E +D L+ D L+ H +H L+ +++ E +L Sbjct: 170 GKSIAYATDFSSISTEMVELYDGVDILVSDCLRREPHPTHAHLAMAIELAERSGAGQLVL 229 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H+ +DY ++ P VV FDG++ ++ Sbjct: 230 SHLDKSMDYRTLVDEVPEGVVVGFDGLEMTA 260 >gi|196230462|ref|ZP_03129324.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196225392|gb|EDY19900.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 259 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 18/266 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G SLGVP I D C +P+++RTR+S+ + +G + ++DTGPDF Sbjct: 6 ITFLGTGTSLGVPMIGCDCRICRSPDPRDKRTRASVYV-----QGEDYAWVIDTGPDFRT 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q LRE+V IDAV++TH H DHI G+D LR + +K + VYA+P+ M+ L F + F Sbjct: 61 QALRERVRRIDAVVFTHSHTDHIMGLDDLRPFCFGEKE-LPVYASPETMRDLERVFVFAF 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---RFGN--V 181 + +P + P+ N P + G E P+ HGR G+ R G + Sbjct: 120 NGQN--RWPGYLRPMPYVING-PFRL----GSTEITPLQVLHGRTPVNGYLLRRNGEPLL 172 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY +D PA + E ++ + L++DAL+ H +H ++ E+L + + P TH+ Sbjct: 173 AYLSDCKEVPAAAREAVRGVRHLVVDALRYTPHPTHMNIEEALALAQDVCPGKTWFTHLC 232 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFS 267 D+ + P V A+DG++ Sbjct: 233 HDVMHAEAEAELPPEVRLAYDGLKIE 258 >gi|226226511|ref|YP_002760617.1| hypothetical protein GAU_1105 [Gemmatimonas aurantiaca T-27] gi|226089702|dbj|BAH38147.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 267 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 7/262 (2%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP+I C +P+++RTR I G +++DT P+ +Q++ Sbjct: 6 LGTGTSFGVPQIGCGCPVCRSEDPRDKRTRCGAVIEVDGVEGP-VRLLIDTPPELRLQLV 64 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 V S+DAVLYTH HADHIHGID LR +++ P+ +Y + L F Y Sbjct: 65 AAGVSSVDAVLYTHEHADHIHGIDDLRAITIRRTSPLPMYGEAHTLTTLAARFPYVV--- 121 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D + P+ E + + A V + +P HGRI+ +R G++ Y TD Sbjct: 122 -DPSMRPLPGTTRPEGTPIAVTPGVAFDVRGVTVLPFTVPHGRITVTAYRVGDIGYVTDA 180 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ++L L + L+++AL H SH S+ E++ L+ + TH+ D + Sbjct: 181 KTLPPDALAALTGVRVLVVNALLRHTHPSHLSIDEAITMARLVGAERTYFTHLTHDNFHA 240 Query: 248 MVLKSTPSRVVPAFDGMQFSSP 269 + P+ + PA+DG+ P Sbjct: 241 ALAAELPAGIEPAYDGLVVDLP 262 >gi|189184651|ref|YP_001938436.1| PhnP protein [Orientia tsutsugamushi str. Ikeda] gi|189181422|dbj|BAG41202.1| PhnP protein [Orientia tsutsugamushi str. Ikeda] Length = 249 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 18/263 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGCG SLGVP I C N+R RSSL + +E ++++D+G D Sbjct: 2 WKVIVLGCGPSLGVPVIGCKCSVCMSNIKFNKRLRSSLYLQYNNE----ISILIDSGCDI 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DA++ THPH+DHI GID LR + + +DVYA + + ++ +++ Y Sbjct: 58 RFQLLRANITKLDAIILTHPHSDHIAGIDNLRVFTYQNGCSLDVYANAETVDYITKNYSY 117 Query: 125 CFKALDDRTYPPIVNPIVIEN-NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F+ ++N I I++ V I K E Q HG I+SLG R N Y Sbjct: 118 LFE-------RNLLNAIKIDDYGTVNIKGK------EITTFQQNHGDINSLGIRIKNFVY 164 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV FP +S + L +D ++D L+ +H L+E ++ E PK LT+M+ Sbjct: 165 SNDVRKFPRKSYQFLSKIDVWMLDCLQVIATDAHAGLNEVMQWNEQFMPKKIYLTNMNHT 224 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 +DY + + A+DG++F Sbjct: 225 IDYYGIQPMLSKNIALAYDGLEF 247 >gi|223939449|ref|ZP_03631326.1| beta-lactamase domain protein [bacterium Ellin514] gi|223891834|gb|EEF58318.1| beta-lactamase domain protein [bacterium Ellin514] Length = 276 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 23/269 (8%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + FT LG G S GVP I D+ NPKN RTR S+ I+ ++VDT PDF Sbjct: 3 FSFTFLGSGTSQGVPMIGTDYPESFLANPKNHRTRPSIYIAT-----DQIKLVVDTTPDF 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVLRE + +DAV++TH HADHI G+D R + + + +YA + M L F Y Sbjct: 58 RTQVLRENIRWLDAVIFTHSHADHIMGLDDCRRFCDLRNGALPIYANQNTMNDLKRVFIY 117 Query: 125 CFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D +P I +IE P + G +E P+ HGR+ + G+ F Sbjct: 118 AFH---DGPWPKGYFIPEQRIIEG---PFTI----GDLEITPLPLPHGRMITNGYLFVQG 167 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 +AY +D P E+++++ ++ ++DAL+ H +H L E+L I + Sbjct: 168 GKKKLAYLSDCKEVPVEAIKQVSGVEVAVLDALRRAPHPTHMCLDEALTTARRIGAERTY 227 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 TH+ D D+D+ P V A+DG++ Sbjct: 228 FTHLTHDYDHDIAQAELPPSVELAYDGLK 256 >gi|237718355|ref|ZP_04548836.1| hydrolase [Bacteroides sp. 2_2_4] gi|293372865|ref|ZP_06619239.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|299146577|ref|ZP_07039645.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] gi|229452288|gb|EEO58079.1| hydrolase [Bacteroides sp. 2_2_4] gi|292632154|gb|EFF50758.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|298517068|gb|EFI40949.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] Length = 252 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 128/262 (48%), Gaps = 24/262 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 I+G G S GVP+I C T+PK+ R R+S + R +++D GPDF QV Sbjct: 5 IIGSGTSTGVPQIGCTCPVCTSTDPKDNRLRASAIVETDDAR-----ILIDCGPDFRTQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LRLPFEKIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAENYVAQGLRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAY 183 D YP + D+P+ S G E +P+ HGR+ LG+R G + Y Sbjct: 117 --DHRYPGV--------PDIPLQEISVGQAFSVNHTEVLPLRVMHGRLPILGYRIGQLGY 166 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P ES E+L +D L+++AL+ H +H +L E+L + I K HM D Sbjct: 167 ITDMLTMPEESYEQLAGIDVLVVNALRIATHPTHQNLEEALAVAQRIQAKKTYFIHMSHD 226 Query: 244 LD-YDMVLKSTPSRVVPAFDGM 264 + + V KS P + AFDG+ Sbjct: 227 MGLHAEVEKSLPENIHLAFDGL 248 >gi|34499173|ref|NP_903388.1| hydrolase protein [Chromobacterium violaceum ATCC 12472] gi|34105024|gb|AAQ61380.1| probable hydrolase protein [Chromobacterium violaceum ATCC 12472] Length = 250 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 134/256 (52%), Gaps = 12/256 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +GCG+S G P I C + +N+RTR+S + RV E G ++DTGPD Q L Sbjct: 1 MGCGSSSGTPAIGCGCPTCQSDDVRNKRTRASAYV-RVGELG----FLIDTGPDLRQQAL 55 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE V +DAVLYTHPHADH++GID LR + ++ PI +Y + ++ E F Y + Sbjct: 56 REGVSRLDAVLYTHPHADHLNGIDDLRAFCYLKQGPIALYGNDFTIANIRERFGYALQPP 115 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P++ P V+ + G + IP+L HG LG+R G+VA+ TD++ Sbjct: 116 SRMWDKPVLLPEVVNGP-----FQHQGVTLTPIPLL--HGSWPCLGWRIGDVAWLTDLSR 168 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P SL L+ L+ L +D L + SH S+ E+ + I + +L HM L+Y + Sbjct: 169 IPDSSLPLLEGLELLFLDCLNEDPYPSHLSVGEAFEWAARIAARRTVLIHMTHKLEYLDL 228 Query: 250 LKSTPSRVVPAFDGMQ 265 + P V FDG + Sbjct: 229 SQRCPPGVEVGFDGWR 244 >gi|46202672|ref|ZP_00208611.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 218 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 10/216 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +T ++VDT PD Q+L V S+DAV+YTH HADH+HGID LR ++ + V+ Sbjct: 4 GDTRILVDTSPDLRDQLLAAGVKSVDAVVYTHDHADHLHGIDDLREINRATRKWLPVWGD 63 Query: 112 PDCMKHLFESFRYCFKALDDR---TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + F Y F+ L++ Y P++ I P + G I+ IP Q H Sbjct: 64 AGTLATARSRFPYAFEPLEEMGEMIYRPLLEAHEISG---PFRI----GNIDVIPFDQDH 116 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 G +LG RFG++AY TDV P E+ + L+ +D II L + H +H ++++L+ I+ Sbjct: 117 GYCRTLGLRFGSMAYSTDVVEMPPEAFKALKGVDTWIIGCLVDYPHQTHAHIAKALEWID 176 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 + P+ A +THM LDY+ V ++ P V+PA DG+ Sbjct: 177 CVKPRRAYITHMGSRLDYEAVRRAVPPHVIPAHDGL 212 >gi|86130306|ref|ZP_01048906.1| metallo-beta-lactamase superfamily protein [Dokdonia donghaensis MED134] gi|85818981|gb|EAQ40140.1| metallo-beta-lactamase superfamily protein [Dokdonia donghaensis MED134] Length = 263 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 137/273 (50%), Gaps = 23/273 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S G+P I C +P+++R R S+ I ++D GPDF Sbjct: 3 ITFLGTGTSQGIPIIGSTHPVCLSDDPRDKRLRVSVLIE-----WDKYNYVIDCGPDFRQ 57 Query: 67 QVL----REQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q+L R++ + D +L+TH HADH+ G+D +R + +Q + +Y +K+ Sbjct: 58 QMLSTLSRKRTPAGDPAPLHGILFTHEHADHVAGLDDIRPFVFRQG-DMPIYGHKRVIKN 116 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L E F Y F + P V ++NN+ PI + G I PI HG + G+R Sbjct: 117 LEERFEYIFTRENRYPGAPSVTSHEVKNNE-PISL----GNIAVTPIEVYHGDLQVFGYR 171 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 F +AY TDV E + KL+NL+ L+I+ L+ H +H ++ E+L I INPK A L Sbjct: 172 FDKIAYLTDVKTIAEEEIAKLKNLEILVINCLREEPHRTHLNVDEALSLIARINPKKAYL 231 Query: 238 THM--HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 TH+ H+ D K P V A+DG+ ++ Sbjct: 232 THISHHLGFHADAEAK-LPENVYIAYDGLTLTT 263 >gi|326335502|ref|ZP_08201689.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692268|gb|EGD34220.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 296 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 12/258 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I + + K++R R+S+ +S V +D PDF Q Sbjct: 44 TFLGTGTSQGVPVIGMNTPVARSKDKKDKRLRTSVLLS-----WGGVNVNIDCSPDFRQQ 98 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR +V ++A+L+TH HADH G+D +R + LKQ + +Y P ++ L F Y F Sbjct: 99 MLRHKVQHLEAILFTHEHADHTAGLDDIRPFVLKQG-DMPIYGLPRVIEQLRIRFAYIFA 157 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V IE+ P + + PI QHG + +G+R GN+AY TD Sbjct: 158 KENRYAGAPSVKVTEIEDY-TPFLLFGK----KVTPISIQHGTLPIIGYRIGNLAYITDA 212 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + L K +D L+++AL+ H +H +L E+L I + P+ A LTHM + + Sbjct: 213 KYINEKELSKFYKVDTLVLNALRKAPHPTHLNLDEALTIIREVCPRQAFLTHMSQTMGFH 272 Query: 248 M-VLKSTPSRVVPAFDGM 264 V K PS+V A+D + Sbjct: 273 AKVQKELPSQVFLAYDNL 290 >gi|31747674|gb|AAO38319.1| Lfe137p1 [Leptospirillum ferrooxidans] Length = 243 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 127/240 (52%), Gaps = 15/240 (6%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GAS GVP I C T+ KNRRTRSS+ + R + +++DT PD Q L Sbjct: 16 LGTGASSGVPVIGCSCPVCISTDKKNRRTRSSVLV-----RCAGKNLLIDTSPDLRYQSL 70 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + V++ID V++THPHADH+ G+D LR + QKR I VYA + + F Y F Sbjct: 71 KNGVVTIDGVIFTHPHADHVLGLDELRIFNYIQKREIPVYADSYTLSRVQMMFPYAFSEA 130 Query: 130 D--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + P ++ + D+ G + + P+ HG + + R ++ Y TD Sbjct: 131 NRGGLSRPKLIPHEITGPADI------LGMSVISFPVY--HGPVMNHAVRINDLVYLTDC 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ES E L ++ LI+ A+K H SHF + E+L IE +NPK A +TH+ L+++ Sbjct: 183 KGIPDESWEALYGVETLIVGAVKYEPHESHFGIHEALALIERLNPKRAFITHLSHSLEHE 242 >gi|320101936|ref|YP_004177527.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Isosphaera pallida ATCC 43644] gi|319749218|gb|ADV60978.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Isosphaera pallida ATCC 43644] Length = 267 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 135/257 (52%), Gaps = 9/257 (3%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP + D C +P+N RTR S R +++DT P+ +Q+ Sbjct: 15 ILGSGTSTGVPTLGCDCSVCLSRDPRNHRTRPSALF-----RLPQGDLLIDTTPEMRLQL 69 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE V + A+ YTH HADH+ G+D R + P+ V+ + F Y F+ Sbjct: 70 LRENVRFVHAIAYTHDHADHLMGLDDARLFPKYIGGPVPVFCEERVEDSIRRIFHYAFQQ 129 Query: 129 LDDRTYPPIVNPIVIENNDVP-ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +YP P + P I ++ G + +PI HGRI LGFR G +AYCTDV Sbjct: 130 -EVLSYPFGGVPRLAFRRIQPGIAFETLGERV--VPIRLDHGRIPVLGFRIGGLAYCTDV 186 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ESL L +LD L++D L+ H +H SL+ESL IE + P+ A+LTH+ D+ Sbjct: 187 KRIPEESLPLLTDLDVLVLDTLRYEEHPTHLSLNESLALIERLAPRRAVLTHLSHAFDHH 246 Query: 248 MVLKSTPSRVVPAFDGM 264 K+ P V A+DG+ Sbjct: 247 AAEKTLPPHVRLAYDGL 263 >gi|148285037|ref|YP_001249127.1| hypothetical protein OTBS_1916 [Orientia tsutsugamushi str. Boryong] gi|146740476|emb|CAM81011.1| conserved hypothetical protein [Orientia tsutsugamushi str. Boryong] Length = 249 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 86/263 (32%), Positives = 134/263 (50%), Gaps = 18/263 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGCG SLGVP I C N+R RSSL + E ++++D+G D Sbjct: 2 WKVIVLGCGPSLGVPVIGCKCSVCMSNIEFNKRLRSSLYLQYNHE----ISILIDSGCDI 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DAV+ THPH+DHI GID LR + + +DVYA + + ++ +++ Y Sbjct: 58 RFQLLRANITKLDAVILTHPHSDHIAGIDNLRVFTYQNGCSLDVYANVETVDYITKNYSY 117 Query: 125 CFKALDDRTYPPIVNPIVIEN-NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F+ ++N I I++ V I K E Q HG I+SLG R N Y Sbjct: 118 LFE-------RNLLNAIKIDDYGTVNIKGK------EITTFQQNHGDINSLGIRIKNFVY 164 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV FP +S + L +D ++D L+ +H L+E ++ E PK LT+M+ Sbjct: 165 SNDVRKFPRKSYQFLSKIDVWMLDCLQVIATDAHAGLNEVMQWNEQFMPKKIYLTNMNHT 224 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 +DY + + A+DG++F Sbjct: 225 IDYYGIQPMLSRNIALAYDGLEF 247 >gi|187918394|ref|YP_001883957.1| metal-dependent hydrolase [Borrelia hermsii DAH] gi|119861242|gb|AAX17037.1| metal-dependent hydrolase [Borrelia hermsii DAH] Length = 252 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 87/257 (33%), Positives = 136/257 (52%), Gaps = 14/257 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GAS GVP + C KN+R RS+ +S +++DTGPD Q+L Sbjct: 6 LGTGASSGVPMLNCSCRVCSLNFGKNKRLRSAFFLSLYG-----MNLLIDTGPDIRAQLL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA- 128 RE ++ +D VLYTH H DHI G+D ++ F + P+ +YA M+H+ +F + F + Sbjct: 61 RENIVKLDLVLYTHEHYDHIMGLDDIK--FYTRTAPLPIYARESTMQHIKNAFPHNFSSK 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + I+ + ++ + G I IP+L HG I SLG+R N+AY TDV Sbjct: 119 VSISGKANIIPGLAVDLQQIFF----RGIKIMPIPLL--HGDIISLGYRIDNLAYLTDVK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ ++ Sbjct: 173 SIPEISYNYLKGLDVLVIDALRIKPHPGHLNFDDAINEVKKINPKIAYFTHISHDILHEE 232 Query: 249 VLKSTPSRVVPAFDGMQ 265 + A+DG+Q Sbjct: 233 FDYLKRDDIYLAYDGLQ 249 >gi|203284437|ref|YP_002222177.1| phnP protein [Borrelia duttonii Ly] gi|201083880|gb|ACH93471.1| phnP protein [Borrelia duttonii Ly] Length = 252 Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/256 (35%), Positives = 137/256 (53%), Gaps = 12/256 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GAS GVP + + C+ KN+R RS+ +S +++DTGPD Q+L Sbjct: 6 LGTGASSGVPMLNCNCRVCNSDFCKNKRLRSAFLLSLCG-----LNLLIDTGPDIRTQLL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE +L +D VLYTH H DHI G+D ++ F + P+ +YA M H+ +F + F + Sbjct: 61 RENILKLDLVLYTHEHYDHIMGLDDIK--FYTRCVPLPIYARETTMHHIKNAFPHNFSSR 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + + P + + + I K I+ IPI HG I SLG+R N+AY TDV + Sbjct: 119 MSISGKANILPRLAVDFE-QIFFKG----IKIIPIPLLHGDIISLGYRINNLAYLTDVKS 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ +D Sbjct: 174 IPEISYSYLEGLDVLVIDALRIKPHPGHLNFDDAILEVKKINPKIAYFTHIAHDIMHDEF 233 Query: 250 LKSTPSRVVPAFDGMQ 265 + A+DG+Q Sbjct: 234 DYLRRDNIYLAYDGLQ 249 >gi|255532950|ref|YP_003093322.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255345934|gb|ACU05260.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 254 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 17/264 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P IT C + K++R R S+ + ++ T+++D+GPDF Q Sbjct: 4 TFLGTGTSQGIPVITCSCAVCQSADHKDKRLRVSVLLET-----ADKTIVIDSGPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR V +DA+L+TH H DHI G+D +R + K+ ID+YA L F Y F Sbjct: 59 MLRAGVKDLDAILFTHEHKDHIAGLDDIRPFNYLLKKNIDIYATERVQHALRREFSYIFS 118 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + YP P ++ I + + G E I + H ++ LGFR G Y T Sbjct: 119 EIH---YPGLPQIDLHTIGDEAFQV------GENEIITLDIMHYKLPILGFRIGGFTYIT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D P ++EK++ L+++AL+ H SHF+L E++ + I+ + TH+ +L Sbjct: 170 DAKTIPDATVEKIKGTRVLVVNALQKEPHISHFTLDEAIAFAKKIDAETTYFTHISHNLG 229 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K P+ + A+DG+ S Sbjct: 230 LHEHVEKDLPANIKLAYDGLTILS 253 >gi|253572233|ref|ZP_04849636.1| hydrolase [Bacteroides sp. 1_1_6] gi|251838008|gb|EES66096.1| hydrolase [Bacteroides sp. 1_1_6] Length = 252 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 127/259 (49%), Gaps = 14/259 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP+I C +PK+ R R+S + R +++D GPDF QV Sbjct: 5 ILGSGTSTGVPQIGCTCPVCTSADPKDNRLRASAIVETEDAR-----ILIDCGPDFRAQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRFGAVPI--YAEEYVARALRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 D YP + + I ++ I + E +P+ HGR+ LG+R G + Y TD+ Sbjct: 117 --DHRYPGVPD---IPLQEIEIGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGYITDML 171 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 P ES E+L+ +D LI++AL+ H +H +L E+LK E I K HM D+ + Sbjct: 172 TMPEESYEQLEGIDVLIMNALRIAPHPTHQNLEEALKAAERIRAKETYFIHMSHDMGLHK 231 Query: 248 MVLKSTPSRVVPAFDGMQF 266 V K P + +DGM+ Sbjct: 232 KVEKELPENIHLTYDGMEI 250 >gi|255033829|ref|YP_003084450.1| beta-lactamase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254946585|gb|ACT91285.1| beta-lactamase domain protein [Dyadobacter fermentans DSM 18053] Length = 253 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 21/262 (8%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I D C + ++R R+S+ I + + ++DTGPDF Q Sbjct: 4 TFLGTGTSQGIPVIACDCVVCRSNDQHDKRLRTSVWI-----QVHGKSFVIDTGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR V S+DA ++TH H DH G+D +R + +Q+ I +Y + + + F Y F Sbjct: 59 MLRANVRSLDAAIFTHQHKDHTAGLDDIRAFNHRQQMDIPLYGRLEVLNQIQTEFAYAFS 118 Query: 128 ALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 D+ YP + ++P IEN P ++ + PI H +++ GFR G+ Y Sbjct: 119 ---DKRYPGVPHFSLHP--IENR--PFEVEG----MTFTPIEVMHHKLAVYGFRIGDFTY 167 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD N E EK++ L++D L+ H SHF+LS++L I+ +N A LTH+ Sbjct: 168 ITDANYISEEEQEKIKGSRVLVLDTLQKEPHLSHFTLSQALDLIDKLNVPQAYLTHISHK 227 Query: 244 LDYDMVLKST-PSRVVPAFDGM 264 L V++S P V A+DG+ Sbjct: 228 LGLHAVVESELPPHVHLAYDGL 249 >gi|326801258|ref|YP_004319077.1| beta-lactamase [Sphingobacterium sp. 21] gi|326552022|gb|ADZ80407.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 255 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 13/259 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I + C ++ +++R RSS+ ++ E+G N +++DTGPDF Q+L Sbjct: 6 LGTGTSQGVPVIACNCNVCTSSDYRDKRLRSSILLT---EKGKN--IVIDTGPDFRFQML 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R +V ++AVLYTH H DHI G+D +R + Q IDV+ + L F Y F Sbjct: 61 RAKVNHLEAVLYTHAHKDHIAGLDDIRAFNYFQGTAIDVFGDYLVQEALKREFYYIFA-- 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + YP I + + D + G I PI H ++ G+RFG+ Y TDV + Sbjct: 119 -EHKYPGIPKINLRDVTDQSFFV----GNIGVQPIDIMHFKLPIKGYRFGDFTYLTDVKS 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDM 248 S+ K++ L+++AL+ H SHF+L E++ I + LTH+ L ++ Sbjct: 174 VSESSVNKIKGTKTLVVNALQREAHISHFTLEEAINFASRIGADHTYLTHISHRLGLHEE 233 Query: 249 VLKSTPSRVVPAFDGMQFS 267 V K P + A+DG++ S Sbjct: 234 VSKELPPGIHLAYDGLEIS 252 >gi|325298133|ref|YP_004258050.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317686|gb|ADY35577.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 259 Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 92/262 (35%), Positives = 132/262 (50%), Gaps = 14/262 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S GVP++ C T+P ++R R S I R +++D GPDF Sbjct: 3 ITVLGSGTSTGVPQVGCTCPVCTSTDPHDKRLRCSGLIETQGVR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q LR ID VL TH H DH+ G+D LR + R + VYA L YC Sbjct: 58 QSLRLPDFQPIDGVLITHEHYDHVGGLDDLRPFC--HFRDVPVYAEQYTADRLKTRIPYC 115 Query: 126 FKALDDRTYPPIVN-PIVIENNDVPI-CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F + YP + P+ VP AG +E +P+ HGR+ LGFR G +A+ Sbjct: 116 FA---EHPYPGVPRIPLAEVEPYVPFKVTGGAGQEVEVVPLRVIHGRLPILGFRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ PAE+ L+ LD L ++AL+ H +H SLS++L+++E I P+ A H Sbjct: 173 ITDMTEMPAETYACLEGLDCLFMNALRLTPHPTHQSLSQALEQVERIRPRKAYFIHASHQ 232 Query: 244 LDYDMVLKST-PSRVVPAFDGM 264 L +++T P V A+DG+ Sbjct: 233 LGMHAEVEATLPPHVRLAYDGL 254 >gi|29346777|ref|NP_810280.1| putative hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|29338674|gb|AAO76474.1| hydrolase, metal-dependent [Bacteroides thetaiotaomicron VPI-5482] Length = 252 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 126/264 (47%), Gaps = 24/264 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP+I C +PK+ R R+S + R +++D GPDF QV Sbjct: 5 ILGSGTSTGVPQIGCTCPVCTSADPKDNRLRASAIVETEDAR-----ILIDCGPDFRAQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRFGAVPI--YAEEYVARALRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAY 183 D YP + D+P+ G E +P+ HGR+ LG+R G + Y Sbjct: 117 --DHRYPGV--------PDIPLQEIEVGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGY 166 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P ES E+L+ +D LI++AL+ H +H +L E+LK E I K HM D Sbjct: 167 ITDMLTMPEESYEQLEGIDVLIMNALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHD 226 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + V K P + +DGM+ Sbjct: 227 MGLHKKVEKELPENIHLTYDGMEI 250 >gi|304321767|ref|YP_003855410.1| putative hydrolase [Parvularcula bermudensis HTCC2503] gi|303300669|gb|ADM10268.1| possible hydrolase [Parvularcula bermudensis HTCC2503] Length = 240 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 8/227 (3%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 G TTV++DT PD Q+L V +D V TH HAD HGID LRG + + + V+ Sbjct: 11 EGELTTVLIDTSPDLREQLLGAAVNHLDGVFITHDHADQTHGIDDLRGLVYRNGKRVPVH 70 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + +L + F YCF++ YP I++ I P+ + G I L HG Sbjct: 71 FSDQTAPNLMQRFAYCFQSSAKTGYPAILDSHRIAPG-APVTVSGPSGDIVVEAALLDHG 129 Query: 170 RISSLGFRF-------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 R+ + G++ G +AY D N P ++ +D ++DAL+ H SH L+ Sbjct: 130 RVPAFGYKLSVPEQAQGGIAYSPDTNGVPDTAMALFTGVDVWVVDALRREPHPSHAHLAM 189 Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 +L+ + + +LT++H+DLDY+ + P VVPA+DG+ P Sbjct: 190 ALEWLVRADASRGVLTNLHIDLDYEELAAELPENVVPAYDGLCIEVP 236 >gi|312131673|ref|YP_003999013.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] gi|311908219|gb|ADQ18660.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] Length = 256 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/262 (33%), Positives = 135/262 (51%), Gaps = 19/262 (7%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP +T C + +++R RSS+ I + NT +++DTGPDF Q Sbjct: 5 TFLGTGTSSGVPVLTCTCEVCRSVDFRDKRLRSSVLI-----QSENTNIVIDTGPDFRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRP-IDVYAAPDCMKHLFESFRYC 125 +L + IDAV+YTH H DH G+D +R Y +L+ R + +Y ++ + F Y Sbjct: 60 MLNAGGVRIDAVVYTHEHKDHTAGLDDIRPYNYLRGTREHVPLYGRAHVLEQIKREFGYI 119 Query: 126 FKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F ++ YP P+V IEN+ I G + IPI H ++ G+R G+ Y Sbjct: 120 F---EENPYPGVPLVKTYTIENSSFQI------GDLSLIPIEVLHYKLPVFGYRIGDFTY 170 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD N E EK++ L+++AL+ H SHF+L ++ + + ++ TH+ Sbjct: 171 ITDANFIAEEEKEKIKGTKVLVLNALQRTPHISHFTLDQATALAQELGAEHTYFTHISHK 230 Query: 244 LD-YDMVLKSTPSRVVPAFDGM 264 L + V K PS + AFDG+ Sbjct: 231 LGLHHEVEKELPSGIHLAFDGL 252 >gi|291513621|emb|CBK62831.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Alistipes shahii WAL 8301] Length = 259 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 17/265 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I C + ++ R R+S + V RG +++D GPDF Sbjct: 3 LTFLGTGTSQGVPVIGCRCKVCTSADRRDNRLRTS---AMVETRG--VRIVIDAGPDFRY 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP----IDVYAAPDCMKHLFESF 122 Q+LR V +DA+L TH H DHI G+D +R + P + ++AAP ++ + + F Sbjct: 58 QMLRTGVRHLDAILLTHEHKDHIGGLDDVRAFNFVDYPPTVHKVHIWAAPRALECVRKDF 117 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNV 181 Y F R P I E +++ I G +E +P+ H R GFR G + Sbjct: 118 DYAFAQDKYRGVPEI------ELHEIDIARPFRVGDVEIVPVSGHHSERFEVTGFRIGTL 171 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD EKL+ + L ++AL+ H SHF+L+E+L I + P+ A +THM Sbjct: 172 AYLTDFKTIEDAEAEKLRGTEVLAVNALRFAPHPSHFNLAEALALIRRVGPREAYITHMS 231 Query: 242 VDLDYDMVLKST-PSRVVPAFDGMQ 265 ++ ++T P V A+DG++ Sbjct: 232 HEIGLHAETEATLPPGVHLAYDGLE 256 >gi|269836230|ref|YP_003318458.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785493|gb|ACZ37636.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 268 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 129/258 (50%), Gaps = 11/258 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S G+P I C +P++RR+R+S + R V++DT + + Sbjct: 15 LTFLGTGTSNGIPIIGCSCPVCTSDDPRDRRSRTSAVV-----RFHGYHVLIDTATELRL 69 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q L + +DAVL+TH HADH+ G D LR + +R + VYA D L E F Y F Sbjct: 70 QALAVGLRRVDAVLFTHAHADHVGGFDDLRRFNELAQRHLPVYAHVDTAATLRERFAYAF 129 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +D +P + ++ G I+ IP+ HGR GFRFG + Y TD Sbjct: 130 --VDQ--FPFYGGKPDLTLHEFTGGFSLFGHRIQPIPVW--HGRWLVHGFRFGPLVYVTD 183 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 P SLE ++ D L+I+AL++ H +H S+ E+L IE + P+ A L HM D+ + Sbjct: 184 AKTIPPASLEIMRGADILVINALRHRPHPTHLSIDEALAVIEEVAPRRAYLVHMTHDVSH 243 Query: 247 DMVLKSTPSRVVPAFDGM 264 P V A+DG+ Sbjct: 244 AATSALLPPHVELAYDGL 261 >gi|203287971|ref|YP_002222986.1| phnP protein [Borrelia recurrentis A1] gi|201085191|gb|ACH94765.1| phnP protein [Borrelia recurrentis A1] Length = 252 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/256 (34%), Positives = 136/256 (53%), Gaps = 12/256 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GAS GVP + + C+ KN+R RS+ +S +++D GPD Q+L Sbjct: 6 LGTGASSGVPMLNCNCRVCNSDFCKNKRLRSAFLLSLCG-----LNLLIDMGPDIRTQLL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE +L +D VLYTH H DHI G+D ++ F + P+ +YA M H+ +F + F + Sbjct: 61 RENILKLDLVLYTHEHYDHIMGLDDIK--FYTRCVPLPIYARETTMHHIKNAFPHNFSSR 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + + P + + + I K I+ IPI HG I SLG+R N+AY TDV + Sbjct: 119 MSISGKANILPRLAVDFE-QIFFKG----IKIIPIPLLHGDIISLGYRINNLAYLTDVKS 173 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ +D Sbjct: 174 IPEISYSYLEGLDVLVIDALRIKPHPGHLNFDDAILEVKKINPKIAYFTHIAHDIMHDEF 233 Query: 250 LKSTPSRVVPAFDGMQ 265 + A+DG+Q Sbjct: 234 DYLRRDNIYLAYDGLQ 249 >gi|153808231|ref|ZP_01960899.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] gi|149129134|gb|EDM20350.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] Length = 252 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 127/259 (49%), Gaps = 14/259 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP+I C +PK+ R R+S + E G + +++D GPDF QV Sbjct: 5 ILGSGTSTGVPQIGCTCPVCTSADPKDNRLRTSA----IVETG-DARILIDCGPDFRTQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR ID VL TH H DH+ G+D LR + PI YA L YCF Sbjct: 60 LRLPFERIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAEQYVSDALRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 D YP + + I ++ + K E IP+ HGR+ LG+R G + Y TD+ Sbjct: 117 --DHRYPGVPD---IPLQEISVGQKFFINTTEVIPLRVMHGRLPILGYRIGQLGYITDML 171 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 P ES E+L +D LI++AL+ H +H L E+L + I K HM D+ + Sbjct: 172 TMPEESYEQLAGIDVLIVNALRIAPHPTHQDLEEALAVAQRIRAKKTYFIHMSHDMGLHA 231 Query: 248 MVLKSTPSRVVPAFDGMQF 266 V + P + A+DG++ Sbjct: 232 EVERKLPENIHLAYDGLEI 250 >gi|260173816|ref|ZP_05760228.1| putative hydrolase [Bacteroides sp. D2] gi|315922079|ref|ZP_07918319.1| hydrolase [Bacteroides sp. D2] gi|313695954|gb|EFS32789.1| hydrolase [Bacteroides sp. D2] Length = 252 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 88/257 (34%), Positives = 126/257 (49%), Gaps = 14/257 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 I+G G S GVP+I C T+PK+ R R+S + R +++D GPDF QV Sbjct: 5 IIGSGTSTGVPQIGCTCPVCTSTDPKDNRLRASAIVETDDAR-----ILIDCGPDFRTQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAENYVAQGLRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 D YP + + I ++ + + E +P+ HGR+ LG+R G + Y TD+ Sbjct: 117 --DHRYPGVPD---IPLQEIAVGQAFSVNHTEVLPLRVMHGRLPILGYRIGQLGYITDML 171 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 P ES E+L +D L+++AL+ H +H +L E+L I K HM D+ + Sbjct: 172 TMPEESYEQLAGIDVLVVNALRIATHPTHQNLEEALAVARCIQAKKTYFIHMSHDMGLHA 231 Query: 248 MVLKSTPSRVVPAFDGM 264 V KS P + AFDG+ Sbjct: 232 KVEKSLPENIHLAFDGL 248 >gi|315224545|ref|ZP_07866372.1| lipoate-protein ligase B [Capnocytophaga ochracea F0287] gi|314945566|gb|EFS97588.1| lipoate-protein ligase B [Capnocytophaga ochracea F0287] Length = 253 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 133/258 (51%), Gaps = 13/258 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I + TNPK++R R+S IS +T + +D PDF Q Sbjct: 4 TFLGTGTSQGIPVIASNHPVGKSTNPKDKRLRTSALIS-----WEDTNIAIDCSPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V ++A+L+TH HADH G+D +R F++ + + +Y + L F Y F Sbjct: 59 MLTNDVQHLEAILFTHEHADHTAGMDDIRP-FVRLQGDMPIYGLKRVIDELRVRFGYIFA 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V P I+ +C G +IE I I+ HG + +G+R ++ Y TD Sbjct: 118 TENRYEGAPSVIPHEIDEAPFTLC----GKIIEPIHIM--HGNLPIVGYRIEDLGYITDA 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY- 246 EKL++LD L+++ L++ +H +H +L+E+L+ I + PK LTH+ + Sbjct: 172 KYIDKSEREKLRDLDVLVLNCLRDDVHPTHLNLAEALEIIGDVQPKRTYLTHVSQTFGFH 231 Query: 247 DMVLKSTPSRVVPAFDGM 264 D + K P V A+D + Sbjct: 232 DEIQKRLPKNVFLAYDNL 249 >gi|83858304|ref|ZP_00951826.1| hypothetical protein OA2633_02356 [Oceanicaulis alexandrii HTCC2633] gi|83853127|gb|EAP90979.1| hypothetical protein OA2633_02356 [Oceanicaulis alexandrii HTCC2633] Length = 242 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 G T +++DT PD Q+L V SID V +TH HAD HGID +R + ++ +D Sbjct: 13 GEATRLLIDTSPDLREQMLSAGVTSIDGVAFTHAHADQAHGIDDVRAFVYRRGARLDAMM 72 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L F Y F+ + YPP++ +E + GG IE HGR Sbjct: 73 NSQTQSLLRARFGYIFETPEGSGYPPLMRDHGLEAGQTA-SIDGPGGKIELSLFDVVHGR 131 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 G R G +AY DVN ++++ L I+DAL++ H SH ++ +L + I Sbjct: 132 EPCSGVRIGPLAYTPDVNGLDQKAMQALSGTSLWIVDALRDKPHPSHAHVNLALDWLSQI 191 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 P+ +LT++H+DLDY +L+ P V PA+DG+Q Sbjct: 192 KPRLGVLTNLHIDLDYKDLLERLPEGVRPAYDGLQI 227 >gi|284038157|ref|YP_003388087.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283817450|gb|ADB39288.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 253 Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 13/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I C + +++R R+S+ I+ V R + ++DTGPDF Q Sbjct: 4 TLLGTGTSSGVPLIGCTCDVCRSVDFRDKRLRTSVHIA-VDGR----SFVIDTGPDFRQQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 VLR + +DAVL+TH H DH G+D +R Y + + I VY P + L F Y F Sbjct: 59 VLRLNLQQLDAVLFTHEHKDHTAGLDEIRAYNFRSGKDIPVYGRPTVLAQLQREFAYVFA 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YP + + + + P + I PI H ++ GFR G+ Y TD+ Sbjct: 119 ---ENKYPGTPHVQLHDLTNEPFEVLG----IRFTPIEVMHHKLPVYGFRIGDFTYLTDL 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-Y 246 N E L+K+ L++DAL+ H SHF+L E++ + +N H+ L + Sbjct: 172 NYISDEELKKVYGTKVLVLDALQLKPHISHFTLDEAVALAKRVNADRTYFVHISHKLGLH 231 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 V K P+ + +DG+Q S Sbjct: 232 RDVEKELPANIRLGYDGLQIS 252 >gi|317476587|ref|ZP_07935833.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] gi|316907263|gb|EFV28971.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] Length = 254 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/268 (35%), Positives = 132/268 (49%), Gaps = 24/268 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C +P++ R R+S + + T+++D PDF Sbjct: 3 LTILGSGTSTGVPEIGCTCPVCTSADPRDNRLRASSLL-----HADDATILIDCSPDFRA 57 Query: 67 QVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFR 123 Q+LR + ID VL TH H DH G+D LR + + PI D Y A HL Sbjct: 58 QILRTSIYEQIDGVLITHEHYDHTGGLDDLRPFCRFSEIPIYSDAYTA----AHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-V 181 YCF D+ YP + + E P ++ E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYLQEVEAGKPFFIRQT----EVLPVAVMHGRLPILGYRIGGRL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 Y TD+ P S E+LQ LD L+++AL+ HS+H S+SE+L E I K HM Sbjct: 167 GYVTDMLTMPDASYEQLQGLDVLVMNALRPQPHSTHQSISEALAAAERIGAKETYFIHMS 226 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 HV L + + P V A+DGM+ + Sbjct: 227 HHVGLHAE-INSQLPPHVHFAYDGMEIN 253 >gi|262341356|ref|YP_003284211.1| metallo-beta-lactamase domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272693|gb|ACY40601.1| metallo-beta-lactamase domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 259 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 12/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C NPK+ R RSS+ I + + ++D PDF Q Sbjct: 4 TFLGTGPSQGIPIIGSKHPVCLSKNPKDNRLRSSVLIEK-----NKKHFLIDCSPDFRYQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF- 126 +LR +DA+ TH H DHI G D +R + +PI VY ++++ + F Y F Sbjct: 59 MLRSNHEKLDAIFITHEHHDHIGGFDDIRSIYFNMNKPIPVYGLRRVLENIKKRFFYIFS 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + TY ++ +++ ++ + P+ HG + LGFR N AY TD Sbjct: 119 ENKKSNTYTSKISVHELDHYKDFFFVE----YFKVFPLSIWHGSLPILGFRIENFAYITD 174 Query: 187 VNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 + P +++++L+ LD LI++ L+ H SHF+LSESL I+ I PK LTH+ H+ Sbjct: 175 ASDIPFKTIQRLKGLDVLILNVLRKVPKHPSHFTLSESLNVIQKICPKKTYLTHISHMIG 234 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 + + P V A+DG+ Sbjct: 235 FHKEIETQLPKNVYLAYDGL 254 >gi|330837292|ref|YP_004411933.1| beta-lactamase domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329749195|gb|AEC02551.1| beta-lactamase domain protein [Spirochaeta coccoides DSM 17374] Length = 259 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 23/262 (8%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 G G S G+P I D C ++ ++ R R+S I R ER + VDTGP+F +Q+L Sbjct: 8 FGTGTSHGIPVIGCDCPTCASSDSRDTRLRTSTLI-REDER----RIAVDTGPEFRLQML 62 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R V ++DAVLYTH HADH++GID LR +P VY + + L F Y A Sbjct: 63 RAAVPALDAVLYTHSHADHMNGIDDLR--IFCYDKPFPVYGSKGTIDDLLVRFPYVVSAH 120 Query: 130 DDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + + + N +P+ + AG + +PI+ HG + + G+R G AY TD N Sbjct: 121 SKYHGDGLPHLDVNVLNPGIPV--EIAGFQVVPVPIV--HGGLVAFGYRIGGFAYLTDCN 176 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH------MHV 242 P ES L+ LD +++D L+ H +HFS+S++++ I LTH +H Sbjct: 177 FIPEESYFLLEGLDVVVLDGLRFTSHPTHFSISQAIEAANRIGASRTYLTHISHDAGLHA 236 Query: 243 DLDYDMVLKSTPSRVVPAFDGM 264 D++ K PS + A+DG+ Sbjct: 237 DIE-----KKLPSGICLAYDGL 253 >gi|218661422|ref|ZP_03517352.1| hypothetical protein RetlI_18770 [Rhizobium etli IE4771] Length = 112 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/108 (57%), Positives = 79/108 (73%) Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 P +QQHG I SLGFR G+VAYC+D++ FP +++EKLQ+LD LIIDAL+ H SH SL + Sbjct: 3 PHIQQHGDIHSLGFRIGDVAYCSDISDFPPQTVEKLQDLDVLIIDALQYTYHPSHLSLEQ 62 Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 SL I + PK AILTHMH LDYD+V+ TP VVPA+D M F + + Sbjct: 63 SLDWIGRLKPKRAILTHMHTPLDYDVVMAETPDHVVPAYDQMSFETEV 110 >gi|251772624|gb|EES53189.1| putative metallo-beta-lactamase family protein [Leptospirillum ferrodiazotrophum] Length = 259 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 131/260 (50%), Gaps = 15/260 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G+S+GVP I C + +N RTRSSL V+ G N ++VDT PD +Q L Sbjct: 12 LGTGSSVGVPMIGCRCAVCLSPDRRNHRTRSSLL---VTVGGKN--ILVDTSPDLRIQSL 66 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R + +DAV+YTH HADH+ G+D LR + Q I +YA + + F Y F + Sbjct: 67 RHGLDRVDAVIYTHAHADHVLGLDELRTFNFIQGGEIPIYAPSRVLDKVRAMFSYAFSDV 126 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + V + VP + + + P L +HG + R G++ Y TD Sbjct: 127 NREG--------VTRPDLVPHALDGPREIFGLPVRPFLVEHGPTRNAALRLGDLVYLTDC 178 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 NA E E ++ +++ ++ H SHF L ++L +I + P++A +TH+ +D+ Sbjct: 179 NAVLPEGKEVMKGARTMVVGVVRYEPHISHFGLDQALAEIREVGPESAYITHISHRMDHA 238 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + P + PA+DG++ S Sbjct: 239 TLESQLPPGIRPAYDGLRIS 258 >gi|167762359|ref|ZP_02434486.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] gi|167700002|gb|EDS16581.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] Length = 254 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 131/271 (48%), Gaps = 32/271 (11%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C +P++ R R+S + + +++D GPDF Sbjct: 3 LTILGSGTSTGVPEIGCTCPVCTSADPRDSRLRASALL-----HTDDAVILIDCGPDFRT 57 Query: 67 QVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFR 123 Q+LR V ID VL TH H DH+ G+D LR + + P+ D Y A HL Sbjct: 58 QMLRASVYERIDGVLITHEHYDHVGGLDDLRPFCRFSEIPVYSDAYTA----AHLRARMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-V 181 YCF D+ YP + + E P ++ E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYLQEVEAGRPFYVRET----EILPVTVMHGRLPILGYRIGRRL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 Y TD+ P S E+LQ LD L+I+AL+ HS+H S+ E+L E I + HM Sbjct: 167 GYVTDMLTMPDASYEQLQGLDVLVINALRPQPHSTHQSIPEALAAAERIGARETYFIHMS 226 Query: 241 -----HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H ++D + P V A+DGM+ Sbjct: 227 HHAGLHAEID-----RQLPPHVHFAYDGMEI 252 >gi|237715173|ref|ZP_04545654.1| hydrolase [Bacteroides sp. D1] gi|262408876|ref|ZP_06085421.1| hydrolase [Bacteroides sp. 2_1_22] gi|294644337|ref|ZP_06722103.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294810711|ref|ZP_06769359.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445006|gb|EEO50797.1| hydrolase [Bacteroides sp. D1] gi|262353087|gb|EEZ02182.1| hydrolase [Bacteroides sp. 2_1_22] gi|292640307|gb|EFF58559.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294442044|gb|EFG10863.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 252 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 I+G G S GVP+I C ++PK+ R R+S + R +++D GPDF QV Sbjct: 5 IIGSGTSTGVPQIGCTCPVCTSSDPKDNRLRASAIVETDDAR-----ILIDCGPDFRTQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LHLPFERIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAEDYVAQGLRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAY 183 D YP + D+P+ + S G E +P+ HGR+ LG+R G + Y Sbjct: 117 --DHRYPGV--------PDIPLQVISVGQSFSINHTEVLPLRVMHGRLPILGYRIGQLGY 166 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P ES E+L +D L+++AL+ H +H +L E+L I K HM D Sbjct: 167 ITDMLTMPEESYEQLAGIDVLVMNALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHD 226 Query: 244 LD-YDMVLKSTPSRVVPAFDGM 264 + + V K+ P + AFDG+ Sbjct: 227 MGLHAEVEKNLPENIHLAFDGL 248 >gi|228471621|ref|ZP_04056395.1| octanoyltransferase [Capnocytophaga gingivalis ATCC 33624] gi|228277040|gb|EEK15726.1| octanoyltransferase [Capnocytophaga gingivalis ATCC 33624] Length = 254 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 12/259 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I + + +++R R+S+ +S V +D PDF Sbjct: 3 LTFLGTGTSQGVPVIGMNTPVAHSRDKRDKRLRTSVLLS-----WGGVNVAIDCSPDFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L +V ++A+L+TH HADH G+D +R + LKQ + +Y P ++ L F Y F Sbjct: 58 QMLSHKVQHLEAILFTHEHADHTAGLDDIRPFVLKQG-DMPIYGLPRVIEQLRIRFAYIF 116 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P V ++ + P + E IPI +HG + LG+R G +AY TD Sbjct: 117 ATENRYEGAPSVRVTEVDAS-TPFTLFGQ----EVIPIAVEHGSLPILGYRIGKLAYITD 171 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L KL +D L+++AL+ H +H +++E+++ ++ ++P+ A TH+ + + Sbjct: 172 AKHIQEAELSKLYKVDTLVLNALRKAPHPTHLNIAEAMEIVKEVHPRQAFFTHISQTMGF 231 Query: 247 DM-VLKSTPSRVVPAFDGM 264 V K P V A+D + Sbjct: 232 HAKVQKELPKNVYLAYDKL 250 >gi|332171404|gb|AEE20659.1| beta-lactamase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 263 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 21/271 (7%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C T+ +++R R S+ I + ++D GPDF Q Sbjct: 4 TFLGTGTSQGIPVIGSTHPVCLSTDARDKRLRVSVLIE-----WEDYNYVIDCGPDFRQQ 58 Query: 68 VL----REQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +L R++ D +L TH HADH+ G+D +R + +Q + +YA +K L Sbjct: 59 MLSTLSRKRTTEGDPAPLHGILLTHEHADHVAGLDDIRPFVFRQG-DMPIYAHKRVLKTL 117 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E F Y F + P V + N V I + G IE PI HG + G+RF Sbjct: 118 AERFDYIFTTENRYPGAPSVASKEVVNG-VSITL----GNIEVQPIEAYHGSLQVFGYRF 172 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 ++AY TDV + +EKLQ LD L+++ L+ H +H ++ E+L + I PK LT Sbjct: 173 QDIAYLTDVKTIADDEIEKLQGLDILVLNCLREEAHYTHLNVEEALDLVAKIKPKRTYLT 232 Query: 239 HMHVDLDYDM-VLKSTPSRVVPAFDGMQFSS 268 H+ L + + P V A+DG+ ++ Sbjct: 233 HISHHLGFHAEAEQKLPKNVFLAYDGLTLTT 263 >gi|218130095|ref|ZP_03458899.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] gi|217987599|gb|EEC53927.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] Length = 254 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/268 (34%), Positives = 131/268 (48%), Gaps = 24/268 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C +P++ R R+S + + T+++D PDF Sbjct: 3 LTILGSGTSTGVPEIGCTCPVCTSADPRDNRLRASSLL-----HADDATILIDCSPDFRA 57 Query: 67 QVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFR 123 Q+LR + ID VL TH H DH G+D LR + + PI D Y A HL Sbjct: 58 QILRTSIYEQIDGVLITHEHYDHTGGLDDLRPFCRFSEIPIYSDAYTA----AHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-V 181 YCF D+ YP + + E P ++ E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYLQEVEAGKPFFIRQT----EVLPVAVMHGRLPILGYRIGGRL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 Y TD+ P S E+LQ LD L+++AL+ H +H S+SE+L E I K HM Sbjct: 167 GYVTDMLTMPDASYEQLQGLDVLVMNALRPQPHPTHQSISEALAAAERIGAKETYFIHMS 226 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 HV L + + P V A+DGM+ + Sbjct: 227 HHVGLHAE-INSQLPPHVHFAYDGMEIN 253 >gi|329955847|ref|ZP_08296650.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] gi|328525227|gb|EGF52277.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] Length = 254 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 94/271 (34%), Positives = 131/271 (48%), Gaps = 32/271 (11%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C + ++ R R+S + + T+++D GPDF Sbjct: 3 LTILGSGTSTGVPEIGCTCPVCTSADLRDNRLRASALLHT-----DDATILIDCGPDFRT 57 Query: 67 QVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFR 123 Q+LR V ID VL TH H DH+ G+D LR + + PI D Y A HL Sbjct: 58 QMLRAAVYERIDGVLITHEHYDHVGGLDDLRPFCRFSEIPIYSDAYTA----AHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-V 181 YCF D+ YP + + E P ++ E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYLREVEAGKPFSVRGT----EILPVAVMHGRLPILGYRIGGRL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 Y TD+ P S E+LQ LD L+I+AL+ H +H S+SE+L E I K HM Sbjct: 167 GYVTDMLTMPDASYEQLQGLDVLVINALRPQPHPTHQSISEALAAAERIGAKETYFIHMS 226 Query: 241 -----HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H ++D + P V A+DGM+ Sbjct: 227 HHAGLHAEIDSQL-----PPHVHFAYDGMEI 252 >gi|255690069|ref|ZP_05413744.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] gi|260624346|gb|EEX47217.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] Length = 252 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 127/268 (47%), Gaps = 32/268 (11%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 I+G G S GVP+I C +PK+ R R+S + R +++D GPDF QV Sbjct: 5 IIGSGTSTGVPQIGCTCAVCTSADPKDNRLRASAIVETEDAR-----ILIDCGPDFREQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + Q + +YA + L YCF Sbjct: 60 LHLPFEKIDGVLITHEHYDHVGGLDDLRPFC--QFGSVPIYAEEYVARGLRSRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAY 183 + +YP + N +P+ AG E +P+ HGR+ LG+R G + Y Sbjct: 117 --EHSYPGVPN--------IPLQEIVAGQPFYINHTEVLPLRVMHGRLPILGYRIGKLGY 166 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P ES E+L +D LI++AL+ H +H +L +L I K HM Sbjct: 167 ITDMLTMPEESYEQLAGVDVLIVNALRIAPHPTHQNLEAALAVARRIQAKKTYFIHM--- 223 Query: 244 LDYDMVLKSTPSRVVP-----AFDGMQF 266 +DM L + R +P AFDG++ Sbjct: 224 -SHDMGLHAEAERRLPENIHLAFDGLEI 250 >gi|212550576|ref|YP_002308893.1| hypothetical protein CFPG_219 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548814|dbj|BAG83482.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 260 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 18/265 (6%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G P + + C + K++R RSS+ + S +++D GPDFY Q+L Sbjct: 6 LGTGTSTGNPEVGCNCVVCLSEDKKDKRFRSSVLVEIESR-----YILIDCGPDFYRQIL 60 Query: 70 ----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 ++ +D VL TH H DH+ G+D LR F + +R +++Y L E Y Sbjct: 61 ETFKKKTFDRLDGVLITHEHYDHVGGLDDLRC-FTRNRRIVNIYTDYYTSIKLKERLPYI 119 Query: 126 FKALDDRTYPPIVNPIV--IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F +++ YP I N + I+ N+ + I+ IPI HGR LG+R AY Sbjct: 120 FN-YNEQQYPGIPNLRIHSIKKNESFFDISG----IKIIPINLLHGRKPILGYRIDKFAY 174 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P EKL+ L L+I+AL+ H++H ++ E+LK I++I P A LTH+ D Sbjct: 175 LTDLKTIPDSEFEKLKGLSVLVINALREKSHATHANIKEALKYIDIIKPDQAYLTHICHD 234 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFS 267 ++ V K P + A+D ++ S Sbjct: 235 FGLHEDVQKKLPPAIRIAYDELEIS 259 >gi|256420330|ref|YP_003120983.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256035238|gb|ACU58782.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 254 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 16/261 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I C +N K++R RSS+ IS ++VDT PDF Q Sbjct: 4 TFLGTGTSQGVPVIACGCQVCVSSNSKDKRLRSSILISDTPA----GNIVVDTTPDFRYQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR V ++AVL TH H DHI G+D +R + Q+R ID+YA + + F Y F Sbjct: 60 MLRAGVKHLEAVLITHSHKDHIAGMDDIRAFNYFQQRAIDIYATEFSQQVIRNEFSYAFA 119 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 ++ YP P +N + N + ++ PI H R+ +GFRF + Y T Sbjct: 120 ---EQKYPGIPELNLRTLTNASFNV------NGLDIAPINVMHHRMPVMGFRFNDFTYIT 170 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D N E +K+ L+++ L+ H SHF+L E ++ + TH+ L Sbjct: 171 DANFIAEEEKKKIIGSKVLVLNTLRKEKHISHFTLGEGIELARELGVPQVYFTHISHQLG 230 Query: 246 -YDMVLKSTPSRVVPAFDGMQ 265 ++ V P + A+DG++ Sbjct: 231 LHEEVSAELPHGMALAYDGLE 251 >gi|256819125|ref|YP_003140404.1| metallo-beta-lactamase domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256580708|gb|ACU91843.1| metallo-beta-lactamase domain protein [Capnocytophaga ochracea DSM 7271] Length = 253 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/259 (31%), Positives = 132/259 (50%), Gaps = 13/259 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S G+P I + TNPK++R R+S IS +T + +D PDF Sbjct: 3 ITFLGTGTSQGIPVIASNHPVGKSTNPKDKRLRTSALIS-----WEDTNIAIDCSPDFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V + A+L+TH HADH G+D +R F++ + + +Y + L F Y F Sbjct: 58 QMLTNDVQHLGAILFTHEHADHTAGMDDIRP-FVRLQGDMPIYGLKRVIDELRVRFGYIF 116 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P V P E ++ P + G +E I I+ HG + +G+R ++ Y TD Sbjct: 117 ATENRYEGAPSVIPH--EIDEAPFTL--YGKTVEPIHIM--HGNLPIVGYRIEDLGYITD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 EKL++LD L+++ L++ +H +H +L+E+L+ I + PK LTH+ + Sbjct: 171 AKYIDKSEREKLRDLDVLVLNCLRDDVHPTHLNLAEALEIIGDVQPKRTYLTHVSQTFGF 230 Query: 247 -DMVLKSTPSRVVPAFDGM 264 D + K P V A+D + Sbjct: 231 HDEIQKRLPKNVFLAYDNL 249 >gi|317480395|ref|ZP_07939495.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] gi|316903473|gb|EFV25327.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] Length = 255 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 132/266 (49%), Gaps = 26/266 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP I C T+P++ R R+S + + +++D GPDF Q+ Sbjct: 6 ILGSGTSTGVPEIGCTCPVCTSTDPRDNRLRASSLLHT-----DDAVILIDCGPDFREQM 60 Query: 69 LREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFRYC 125 LR ID VL TH H DH+ G+D LR + PI D Y A HL YC Sbjct: 61 LRASSFEKIDGVLVTHEHYDHVGGLDDLRPFGRFADIPIYSDAYTA----AHLRARMPYC 116 Query: 126 FKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 F D+ YP P + +E V ++ E +P+ HGR+ LG+R G + Sbjct: 117 FV---DKVYPGVPRIYLQEVEAGQVFHINRT-----EVLPLRVMHGRLPILGYRIGGRLG 168 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM-- 240 Y TD++ P ES E+L+ LD L+++AL+ H +H S+SE+L+ I K HM Sbjct: 169 YITDMHMMPEESYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSH 228 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H L D + K P V A+DG++ Sbjct: 229 HAGLHAD-IEKQLPPHVHFAYDGLEI 253 >gi|298481748|ref|ZP_06999938.1| lipoate-protein ligase B [Bacteroides sp. D22] gi|298271970|gb|EFI13541.1| lipoate-protein ligase B [Bacteroides sp. D22] Length = 252 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 24/262 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 I+G G S GVP+I C ++ K+ R R+S + R +++D GPDF QV Sbjct: 5 IIGSGTSTGVPQIGCTCPVCTSSDLKDNRLRASAIVETDDAR-----ILIDCGPDFRTQV 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ID VL TH H DH+ G+D LR + PI YA + L YCF Sbjct: 60 LHLPFERIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAEDYVAQGLRLRMPYCFV- 116 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAY 183 D YP + D+P+ SAG E +P+ HGR+ LG+R G + Y Sbjct: 117 --DHRYPGV--------PDIPLQEISAGQSFSINHTEVLPLRVMHGRLPILGYRIGQLGY 166 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P ES E+L +D L+++AL+ H +H +L E+L I K HM D Sbjct: 167 ITDMLTMPEESYEQLAGIDVLVMNALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHD 226 Query: 244 LD-YDMVLKSTPSRVVPAFDGM 264 + + V K+ P + AFDG+ Sbjct: 227 MGLHAEVEKNLPENIHLAFDGL 248 >gi|302346274|ref|YP_003814572.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] gi|302150494|gb|ADK96755.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] Length = 276 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 19/263 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT LG G S GVP + C +P++ R R+S + + T +++D+GPDF Sbjct: 26 FTFLGTGTSNGVPVLGCSCDVCKSKDPRDNRLRTSALLET-----AKTRIVIDSGPDFRQ 80 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y I+VYA + L +F YCF Sbjct: 81 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYCALGD--IEVYANENTCDGLHHNFPYCF 138 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 D YP P +N I+ + +K G IE +PI HG + LG+RFG +AY Sbjct: 139 T---DNPYPGVPKLNLHSIQPH-----VKFTIGDIEVMPISVMHGGLPILGYRFGKLAYI 190 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HV 242 TD+ E L L+ ++ L+++AL+ H SH +SE++ I K LTH+ H Sbjct: 191 TDMKTIKEEELPYLEGVETLVVNALRWEREHHSHQLISEAIDFSRKIGAKRTYLTHLTHK 250 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 ++ K P+ V A+DG++ Sbjct: 251 IGLHEEAQKLLPNDVFFAYDGLK 273 >gi|161075665|gb|ABX56580.1| putative coenzyme PQQ synthesis protein G [Methylacidiphilum infernorum V4] Length = 266 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 17/265 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP I C +P++ RTR SL I+ + +++DT P+ +Q Sbjct: 12 VLGSGTSQGVPMIGCPCATCHSQDPRDNRTRCSLYIT-----DGQSAILIDTPPELRIQC 66 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + + AVL+TH HADHI G D LR + + + +Y + + M+ L F Y F Sbjct: 67 LRENISMLTAVLFTHSHADHIMGFDDLRRFCDLSGQKLPIYGSQEVMESLARIFPYAFDP 126 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLGFRFGN-----VA 182 ++ V P VI P S G I A P+ HG+ ++ G+ F +A Sbjct: 127 SSEKKGYLRVLPHVI----APYESFSIGSFTITAFPL--PHGQTTTFGYLFEKEGEKILA 180 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y D + P +++E+L +D+L ID L++ H +H S SE++ I K LTH+ Sbjct: 181 YLVDCKSVPQKTIERLSAVDYLFIDGLRDEPHPTHLSTSEAVAIARQIGAKKTFLTHITH 240 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFS 267 + S P V +DG++ + Sbjct: 241 HKSHKEREASLPKNVHVGYDGLEIA 265 >gi|88608665|ref|YP_506461.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600834|gb|ABD46302.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] Length = 264 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 129/272 (47%), Gaps = 26/272 (9%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCG S GVP + C +NP + RTR S+ + S R +++D PD Q Sbjct: 4 TVLGCGNSSGVPVLGCACSVCLSSNPLDTRTRCSVFVETASTR-----LLIDASPDLRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +RE S+D V YTH H DH G L + + I V++ + H+ + Y FK Sbjct: 59 AMREGFSSVDQVFYTHIHFDHHAGTHELSSFATSEGNCIHVFSDEFTISHIESLYGYLFK 118 Query: 128 ------ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GN 180 A+ R Y + VP + A G + + Q HG I+S G G Sbjct: 119 PEHLSNAMWKRCY--------LSAKVVPYYEEFAVGDMLCMIFPQTHGSINSCGIILNGK 170 Query: 181 VAYCTDVNAFPAESLEKLQNLDF--LIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 AYCTDV P +L+ +++L+ II+ +H + SE+L+ I LI PK+A T Sbjct: 171 FAYCTDVRLIPDRALDIMKSLELEVFIIECFDYQSSYAHSNFSEALEYINLIQPKSAFFT 230 Query: 239 HMHVDLDYDMVLK----STPSRVVPAFDGMQF 266 HM L YD +L S S V+PA DG+ Sbjct: 231 HMTHKLAYDDLLTRLKVSGVSHVMPAHDGLSL 262 >gi|260912128|ref|ZP_05918684.1| lipoate-protein ligase B [Prevotella sp. oral taxon 472 str. F0295] gi|260633734|gb|EEX51868.1| lipoate-protein ligase B [Prevotella sp. oral taxon 472 str. F0295] Length = 253 Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 19/263 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LG G S GVP + C NPK++R R +L + R V+VD GPD M Sbjct: 3 FTLLGTGTSNGVPVLGCGCEVCRSDNPKDKRMRCALLVESDEHR-----VLVDCGPDIRM 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ IDAVL TH H DH+ G+D LR Y I +Y D ++ L + YCF Sbjct: 58 QLMPLAFRPIDAVLLTHIHYDHVGGVDDLRPYC--SFGDIHLYGNIDTVRGLKHNMPYCF 115 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 D YP P++ IE + P+ G I +P+ HG++ + +RFG +AY Sbjct: 116 S---DDPYPGVPLLKLHAIEPHH-PLTF----GDIHVMPLEVLHGQMPIMAYRFGKLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HV 242 TD+ A E L+ LQ ++ L+I+AL+ H SH +SE++ + + ILTH+ H Sbjct: 168 TDMKAIRDEELQYLQEVEVLVINALRFEKEHHSHQLVSEAIAFSRRLGVRRTILTHLTHQ 227 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 +++ K P V +DGMQ Sbjct: 228 VGLHEVANKKLPRGVEFGYDGMQ 250 >gi|189220269|ref|YP_001940909.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] gi|189187127|gb|ACD84312.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] Length = 286 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 17/265 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP I C +P++ RTR SL I+ + +++DT P+ +Q Sbjct: 32 VLGSGTSQGVPMIGCPCATCHSQDPRDNRTRCSLYIT-----DGQSAILIDTPPELRIQC 86 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + + AVL+TH HADHI G D LR + + + +Y + + M+ L F Y F Sbjct: 87 LRENISMLTAVLFTHSHADHIMGFDDLRRFCDLSGQKLPIYGSQEVMESLARIFPYAFDP 146 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLGFRFGN-----VA 182 ++ V P VI P S G I A P+ HG+ ++ G+ F +A Sbjct: 147 SSEKKGYLRVLPHVI----APYESFSIGSFTITAFPL--PHGQTTTFGYLFEKEGEKILA 200 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y D + P +++E+L +D+L ID L++ H +H S SE++ I K LTH+ Sbjct: 201 YLVDCKSVPQKTIERLSAVDYLFIDGLRDEPHPTHLSTSEAVAIARQIGAKKTFLTHITH 260 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFS 267 + S P V +DG++ + Sbjct: 261 HKSHKEREASLPKNVHVGYDGLEIA 285 >gi|325970644|ref|YP_004246835.1| beta-lactamase [Spirochaeta sp. Buddy] gi|324025882|gb|ADY12641.1| beta-lactamase domain protein [Spirochaeta sp. Buddy] Length = 257 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 130/260 (50%), Gaps = 12/260 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C T+P++ R R+S+ + + +T++VDT P+F +Q Sbjct: 7 TFLGTGTSHGIPVIGCSCPVCTSTDPRDSRYRASILLHQ-----DESTILVDTSPEFRLQ 61 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LR + +DAVLYTH HADH +GID LR + + R + VY D + + F Y Sbjct: 62 ALRAGIKGLDAVLYTHDHADHFNGIDDLRVFC--KDRCLPVYCKEDVAQAIQSRFSYVLH 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D P + +++ + P+ + S + IPIL HG+ FR G+ AY TD Sbjct: 120 GEDIAGGIPHLELKILKAYE-PVQIGSC--TVLPIPIL--HGKREIFAFRIGSFAYATDC 174 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P +SL + LD L++ AL+ H +H+S+ E+ + K TH+ L + Sbjct: 175 SEVPIQSLPYFEGLDTLVVGALRYWPHPTHYSVFEATAFARKVGAKRVYFTHLSHGLSHM 234 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + P + A+D + + Sbjct: 235 TLSSELPPGYLVAYDMLHIA 254 >gi|255003989|ref|ZP_05278790.1| PhnP protein [Anaplasma marginale str. Virginia] Length = 313 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 137/267 (51%), Gaps = 14/267 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S+GVP + D C + N+RTR+S I E+G + ++VD PD Q Sbjct: 53 TILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALI----EKG-DVRILVDASPDLRAQ 107 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF 126 LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Y F Sbjct: 108 ALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNAYFF 167 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 + + P + + V + G + + Q HG ++S GF F + +AYCT Sbjct: 168 --VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIAYCT 225 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM DLD Sbjct: 226 DVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSHDLD 285 Query: 246 Y----DMVLKSTP-SRVVPAFDGMQFS 267 Y D V + P V+ A+DG++ + Sbjct: 286 YHQLTDYVKEKLPGGNVLVAYDGLELN 312 >gi|265751142|ref|ZP_06087205.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] gi|263238038|gb|EEZ23488.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] Length = 258 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 26/271 (9%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S I R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++ LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A+ TD+ P + LQ LD L+++AL+ H++H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHNTHQNLKEALDNAQRIGAGETYFIHM- 229 Query: 242 VDLDYDMVLKSTPSRVVP-----AFDGMQFS 267 + M L + R++P A+DGM+ S Sbjct: 230 ---SHHMGLHADAERLLPPHVHFAYDGMRIS 257 >gi|237710334|ref|ZP_04540815.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] gi|229455796|gb|EEO61517.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] Length = 258 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 26/271 (9%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S I R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCLVCTSSDPRDNRLRCSGLIETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++ LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A+ TD+ P + LQ LD L+++AL+ H++H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHNTHQNLKEALDNAQRIGAGETYFIHM- 229 Query: 242 VDLDYDMVLKSTPSRVVP-----AFDGMQFS 267 + M L + R++P A+DGM+ S Sbjct: 230 ---SHHMGLHADAERLLPPHVHFAYDGMRIS 257 >gi|198275439|ref|ZP_03207970.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] gi|198271068|gb|EDY95338.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] Length = 265 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 14/262 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP++ C ++P++ R R S + R +++D GPDF Sbjct: 3 ITILGSGTSTGVPQVGCTCKVCTSSDPRDNRLRCSGLVEVNGVR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LR +ID VL TH H DH+ G+D LR + + R I VYA L YC Sbjct: 58 QMLRLNDFRAIDGVLITHEHYDHVGGLDDLRPFC--KFRDIPVYAEDYTATRLKNRMPYC 115 Query: 126 FKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F + YP P + I+ + + AG +E IP HG++ +GFR G +A+ Sbjct: 116 FT---ENLYPGVPHIPLNYIKEGEPFVVSNVAGNQVEVIPFRVMHGKLPIMGFRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P S + L+ LD L+++AL+ H +H SLS +L++ I HM Sbjct: 173 ITDMLHLPESSYDYLKGLDCLVMNALRIEYHWTHQSLSAALEQTVRIAAGKTYFIHMSHQ 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGM 264 + + V + P V A+DG+ Sbjct: 233 IGLHAEVQEQLPENVFLAYDGL 254 >gi|73666776|ref|YP_302792.1| Beta-lactamase-like [Ehrlichia canis str. Jake] gi|72393917|gb|AAZ68194.1| Beta-lactamase-like protein [Ehrlichia canis str. Jake] Length = 264 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/266 (34%), Positives = 130/266 (48%), Gaps = 13/266 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVP + C + N+R RSS+ + ++ ++VDT PD Q Sbjct: 4 TILGCGSSSGVPVVGCRCDTCSSSLKYNKRMRSSILV-----ESADVQLLVDTTPDLRFQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCF 126 L+ + S+DAVLYTH HADH GI L+ + K I +Y+ + L S Y F Sbjct: 59 ALQNNLSSVDAVLYTHFHADHCDGIADLQQFLPKHDVNNIPIYSDITTLCLLTASNSYFF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV-AYCT 185 + + ++ N + + + I Q HG SS GF F NV AYCT Sbjct: 119 IPSGHASVSKKCS--YLKANVIYYYKEFVVKDFHILAIKQIHGVNSSNGFIFNNVMAYCT 176 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP ES + L LII LK H + L ++ + P+ AILTHM DL+ Sbjct: 177 DVKSFPEESWKFLYKKKVLIIGCLKYDASFGHAHVDLCLDWVKELRPEVAILTHMSHDLE 236 Query: 246 Y----DMVLKSTPSRVVPAFDGMQFS 267 Y D + + ++ +DGMQF+ Sbjct: 237 YYSLIDYIKSHSKDNIIVGYDGMQFN 262 >gi|150004778|ref|YP_001299522.1| putative hydrolase [Bacteroides vulgatus ATCC 8482] gi|149933202|gb|ABR39900.1| metal-dependent hydrolase [Bacteroides vulgatus ATCC 8482] Length = 258 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 88/267 (32%), Positives = 129/267 (48%), Gaps = 20/267 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S I R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++S LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLSILGYRIGRM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 A+ TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMS 230 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H+ L D + P V A+DGM+ Sbjct: 231 HHIGLHAD-AERLLPPHVHFAYDGMKI 256 >gi|212694000|ref|ZP_03302128.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|237723872|ref|ZP_04554353.1| metal-dependent hydrolase [Bacteroides sp. D4] gi|212663532|gb|EEB24106.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|229437698|gb|EEO47775.1| metal-dependent hydrolase [Bacteroides dorei 5_1_36/D4] Length = 258 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/271 (32%), Positives = 130/271 (47%), Gaps = 26/271 (9%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S I R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++ LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A+ TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHM- 229 Query: 242 VDLDYDMVLKSTPSRVVP-----AFDGMQFS 267 + M L + R++P A+DGM+ S Sbjct: 230 ---SHHMGLHADAERLLPPHVHFAYDGMRIS 257 >gi|254994739|ref|ZP_05276929.1| hypothetical protein AmarM_00907 [Anaplasma marginale str. Mississippi] Length = 289 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 14/267 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S+GVP + D C + N+RTR+S I E G + ++VD PD Q Sbjct: 29 TILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALI----ENG-DVRILVDASPDLRAQ 83 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF 126 LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Y F Sbjct: 84 ALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNAYFF 143 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 + + P + + V + G + + Q HG ++S GF F + +AYCT Sbjct: 144 --VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIAYCT 201 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM DLD Sbjct: 202 DVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSHDLD 261 Query: 246 Y----DMVLKSTP-SRVVPAFDGMQFS 267 Y D V + P V+ A+DG++ + Sbjct: 262 YHQLTDYVKEKLPGGNVLVAYDGLELN 288 >gi|222474885|ref|YP_002563300.1| PhnP protein [Anaplasma marginale str. Florida] gi|222419021|gb|ACM49044.1| PhnP protein [Anaplasma marginale str. Florida] Length = 313 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 14/267 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S+GVP + D C + N+RTR+S I E G + ++VD PD Q Sbjct: 53 TILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALI----ENG-DVRILVDASPDLRAQ 107 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF 126 LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Y F Sbjct: 108 ALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNAYFF 167 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 + + P + + V + G + + Q HG ++S GF F + +AYCT Sbjct: 168 --VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIAYCT 225 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM DLD Sbjct: 226 DVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSHDLD 285 Query: 246 Y----DMVLKSTP-SRVVPAFDGMQFS 267 Y D V + P V+ A+DG++ + Sbjct: 286 YHQLTDYVKEKLPGGNVLVAYDGLELN 312 >gi|255002856|ref|ZP_05277820.1| PhnP protein [Anaplasma marginale str. Puerto Rico] Length = 302 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 14/267 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S+GVP + D C + N+RTR+S I E G + ++VD PD Q Sbjct: 42 TILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALI----ENG-DVRILVDASPDLRAQ 96 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF 126 LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Y F Sbjct: 97 ALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNAYFF 156 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 + + P + + V + G + + Q HG ++S GF F + +AYCT Sbjct: 157 --VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIAYCT 214 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM DLD Sbjct: 215 DVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSHDLD 274 Query: 246 Y----DMVLKSTP-SRVVPAFDGMQFS 267 Y D V + P V+ A+DG++ + Sbjct: 275 YHQLTDYVKEKLPGGNVLVAYDGLELN 301 >gi|56416517|ref|YP_153591.1| hypothetical protein AM220 [Anaplasma marginale str. St. Maries] gi|269959069|ref|YP_003328858.1| putative hydrolase [Anaplasma centrale str. Israel] gi|56387749|gb|AAV86336.1| hypothetical protein AM220 [Anaplasma marginale str. St. Maries] gi|269848900|gb|ACZ49544.1| putative hydrolase [Anaplasma centrale str. Israel] Length = 287 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 14/267 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG S+GVP + D C + N+RTR+S I E G + ++VD PD Q Sbjct: 27 TILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALI----ENG-DVRILVDASPDLRAQ 81 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF 126 LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Y F Sbjct: 82 ALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNAYFF 141 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCT 185 + + P + + V + G + + Q HG ++S GF F + +AYCT Sbjct: 142 --VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIAYCT 199 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM DLD Sbjct: 200 DVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSHDLD 259 Query: 246 Y----DMVLKSTP-SRVVPAFDGMQFS 267 Y D V + P V+ A+DG++ + Sbjct: 260 YHQLTDYVKEKLPGGNVLVAYDGLELN 286 >gi|288928228|ref|ZP_06422075.1| lipoate-protein ligase B [Prevotella sp. oral taxon 317 str. F0108] gi|288331062|gb|EFC69646.1| lipoate-protein ligase B [Prevotella sp. oral taxon 317 str. F0108] Length = 253 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 19/263 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT+LG G S GVP + C N K++R R +L + R V+VD GPD M Sbjct: 3 FTLLGTGTSNGVPVLGCGCEVCRSDNSKDKRMRCALLVESKEHR-----VLVDCGPDIRM 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ + IDAVL TH H DH+ G+D LR Y I +Y D +K L + YCF Sbjct: 58 QLMPQVFRPIDAVLLTHIHYDHVGGVDDLRPYC--SFGDIHLYGNVDTVKGLKHNMPYCF 115 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 D YP P++ IE + P+ G I +P + HG++ L +RFG +AY Sbjct: 116 S---DDLYPGVPLLKLHAIEPHQ-PLMF----GDINVMPFVVLHGQMPILAYRFGQLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HV 242 TD+ + L+ L++++ LII+AL+ H SH +SE++ + + ILTH+ H Sbjct: 168 TDMKTIGNDELQYLKDVEVLIINALRFEKEHHSHQLVSEAIDFSRQLGARRTILTHLTHQ 227 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 ++ K P V +DGMQ Sbjct: 228 IGLHEKASKRLPIGVEFGYDGMQ 250 >gi|163846959|ref|YP_001635003.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524779|ref|YP_002569250.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668248|gb|ABY34614.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448658|gb|ACM52924.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 250 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 14/257 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S+GVP I D C ++P++ R R+S I R T+++D GPDF +Q L Sbjct: 6 LGTGTSMGVPVIGCDCPICTSSDPRHHRLRTSALI-----RSHGLTILIDAGPDFRIQAL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + IDAVL TH H DH+ G+D LR + L+Q + V+ + + + + F Y F Sbjct: 61 NAGLRRIDAVLLTHAHFDHVAGLDDLRPFCLRQGS-LPVFGSARTLADVRQRFAYAF--- 116 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 DD + I + + P + G + +PI HG +R G + Y TD + Sbjct: 117 DDTSQGSSRPSITLHAVEEPFQI----GPLTVVPIAVPHGTWMITAYRIGALGYVTDAST 172 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P ++ L+ + L+++AL+ H +H S++E+ + + + + L HM +DY Sbjct: 173 VPPSAVMALRGVRVLVLNALRAEPHPTHLSIAEAGRVAQEVGAQRTFLVHMTHSVDY-RA 231 Query: 250 LKSTPSRVVPAFDGMQF 266 P V A+DG++ Sbjct: 232 DYGLPPEVTFAYDGLEI 248 >gi|23009494|ref|ZP_00050521.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 175 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 1/170 (0%) Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 +R + R + V+A P L + F Y F+ YPPI++ + + P+ + Sbjct: 1 MRPLVIHMHRRVPVHADPLTRALLIQRFGYAFETPPGSAYPPILDLHEMRAGE-PLIIDG 59 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 AGG +EA +HG + GFRFG AY DV+ P + +L+ LD LIIDAL+ H Sbjct: 60 AGGPVEAEAFCMEHGNELAHGFRFGPAAYAPDVSLMPEAAKARLRGLDLLIIDALRETPH 119 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 SH+S+S++L IE + PK AILT++H DLDY + + P VVPA+DG+ Sbjct: 120 PSHYSVSDALALIEEVAPKRAILTNLHTDLDYATLARKLPPGVVPAYDGL 169 >gi|254883016|ref|ZP_05255726.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|319641860|ref|ZP_07996537.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] gi|254835809|gb|EET16118.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|317386533|gb|EFV67435.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] Length = 258 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 129/267 (48%), Gaps = 20/267 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S + R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R + +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLDDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++ LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGRM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 A+ TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMS 230 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H+ L D + P V A+DGM+ Sbjct: 231 HHIGLHAD-AERLLPPHVHFAYDGMKI 256 >gi|219848901|ref|YP_002463334.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543160|gb|ACL24898.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 257 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 14/256 (5%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S+GVP I + C ++P++ R R+S + R T+++D GPDF +Q L Sbjct: 6 LGTGTSMGVPVIGCNCPICTSSDPRHHRLRTSALV-----RSHGLTIVIDAGPDFRLQAL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + IDAVL TH H DH+ G+D LR + L+Q + +Y +P + + F Y F Sbjct: 61 AAGLCRIDAVLLTHAHFDHVAGLDDLRPFCLRQGT-VPIYGSPQTLADVRRRFAYAFDES 119 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + P I + + P + G + +PI HG + +R G + Y TD +A Sbjct: 120 SSGSSRPA---ITLHPVEAPFQL----GALTIVPIAIPHGTWTITAYRIGPLGYVTDASA 172 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P +++ L+ + L+++AL+ H +H S++E+ + + L HM +DY Sbjct: 173 VPPDAVATLRGVQVLVLNALRVEPHPTHLSIAEAAEVAVAVGAPRTFLVHMTHTVDY-RA 231 Query: 250 LKSTPSRVVPAFDGMQ 265 P V A+DG++ Sbjct: 232 DYGLPPEVTFAYDGLE 247 >gi|294778355|ref|ZP_06743778.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] gi|294447617|gb|EFG16194.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] Length = 258 Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 86/267 (32%), Positives = 128/267 (47%), Gaps = 20/267 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S GVP I C ++P++ R R S + R +++D GPDF Sbjct: 3 ITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVETEGLR-----ILIDCGPDFRE 57 Query: 67 QVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++R +D VL TH H DH+ G+D LR + + R + VYA + L + YC Sbjct: 58 QMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFC--RFRDVPVYAEQYTAERLRQRIPYC 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F + YP + P + VP I G +E P+ HG++ LG+R G + Sbjct: 116 FA---EHLYPGV--PRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGRM 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM- 240 A+ TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 171 AWITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMS 230 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H+ L D + P V A+DGM+ Sbjct: 231 HHIGLHAD-AERLLPPHVHFAYDGMKI 256 >gi|68171544|ref|ZP_00544922.1| Beta-lactamase-like [Ehrlichia chaffeensis str. Sapulpa] gi|88657965|ref|YP_507772.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999028|gb|EAM85701.1| Beta-lactamase-like [Ehrlichia chaffeensis str. Sapulpa] gi|88599422|gb|ABD44891.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 263 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 23/271 (8%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGAS GVP + C N+R RSS+ + E G +T ++VDT PD Q Sbjct: 4 TILGCGASGGVPIVGCQCDVCSSNLTYNKRMRSSIFV----ENG-DTQLLVDTTPDLRCQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCF 126 L+ + S+DAVLYTH HADH GI L+ + K I +Y+ + + L S Y F Sbjct: 59 ALKNNLSSVDAVLYTHFHADHCDGIADLQPFLPKHGLNSIPIYSDINTLCLLTASNSYFF 118 Query: 127 -----KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + + + VN I + I G + I Q HG +S GF F + Sbjct: 119 IPSAYTSAWKKCHYLTVNTIY-HYKEFTI------GDFCILAIKQLHGVSNSNGFIFNDQ 171 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV +FP ES + L LI+ LK +H + L I+ P+ AILTHM Sbjct: 172 VAYCTDVQSFPEESCKFLYKKKVLILGCLKYTASFAHSHVDLCLDWIKEFKPEVAILTHM 231 Query: 241 HVDLDY----DMVLKSTPSRVVPAFDGMQFS 267 DL+Y D + + +V +DG+Q + Sbjct: 232 SHDLEYYSLIDYIRSRSQDNIVVGYDGLQLN 262 >gi|294673338|ref|YP_003573954.1| putative phnP protein [Prevotella ruminicola 23] gi|294473995|gb|ADE83384.1| putative phnP protein [Prevotella ruminicola 23] Length = 253 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 19/264 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I C T+PK++RTR S + NT +++D GPDF Sbjct: 3 LTFLGTGTSCGVPVIGCQCKVCKSTDPKDKRTRCSALVET-----DNTRILIDCGPDFRA 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ G+D +R Y Q I+VYA + + E YCF Sbjct: 58 QILPQPFRKIDGILITHSHYDHMGGMDDIRPYC--QFGAINVYANKLAKQSMLEMLPYCF 115 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + YP P + IE + VP+ + G +E +PI HG++ LG++ G + Y Sbjct: 116 A---ENRYPGVPAIGLHEIEPH-VPLQI----GNLEVLPIQVMHGKLPILGYKIGKLTYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ L L+ + L+++AL+ + H SH + +++ + K ++ H+ D Sbjct: 168 TDMKTIDDGELTYLEGTELLVVNALRFDKPHHSHQLMDDAIAFARKVGAKQTLIIHVCHD 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + ++ V K P + A+DG + Sbjct: 228 VGLHEEVNKLLPEGIDLAYDGQEI 251 >gi|298386576|ref|ZP_06996132.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] gi|298260953|gb|EFI03821.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] Length = 247 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 118/253 (46%), Gaps = 24/253 (9%) Query: 20 RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV 79 R+ C +PK+ R R+S + + +++D GPDF QVL ID V Sbjct: 11 RLDAPCPVCTSADPKDNRLRASAIVE-----TEDARILIDCGPDFRAQVLHLPFEKIDGV 65 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 L TH H DH+ G+D LR + PI YA + L YCF D YP + Sbjct: 66 LITHEHYDHVGGLDDLRPFCRFGAVPI--YAEEYVARALRLRMPYCFV---DHRYPGV-- 118 Query: 140 PIVIENNDVPICMKSAGGVI-----EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 D+P+ G E +P+ HGR+ LG+R G + Y TD+ P ES Sbjct: 119 ------PDIPLQEIEVGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGYITDMLTMPEES 172 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKST 253 E+L+ +D LI++AL+ H +H +L E+LK E I K HM D+ + V K Sbjct: 173 YEQLEGIDVLIMNALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHDMGLHKKVEKEL 232 Query: 254 PSRVVPAFDGMQF 266 P + +DGM+ Sbjct: 233 PENIHLTYDGMEI 245 >gi|319901721|ref|YP_004161449.1| hydrolase [Bacteroides helcogenes P 36-108] gi|319416752|gb|ADV43863.1| putative hydrolase [Bacteroides helcogenes P 36-108] Length = 254 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 24/265 (9%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G S GVP I C +P++ R R+S + + +++D GPDF Q+ Sbjct: 5 ILGSGTSTGVPEIGCTCSVCASADPRDNRLRASSLL-----HTDDAVILIDCGPDFREQM 59 Query: 69 LREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFRYC 125 LR ID VL TH H DH+ G+D LR + + P+ D Y A HL YC Sbjct: 60 LRMLSFEKIDGVLITHEHYDHVGGLDDLRPFCRFGEIPVYSDTYTA----THLRARMPYC 115 Query: 126 FKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAY 183 F D+ YP + + E +P + E +P+ HG++ LG+R G + Y Sbjct: 116 FV---DKVYPGVPRIYLWEVEAGIPFYVHHT----EIMPVRIMHGKLPILGYRIGQRLGY 168 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--H 241 TD+ P S E+L+ +D L+++AL+ H++H +LSE+LK I K L HM H Sbjct: 169 VTDMLTMPEASYEQLEGVDVLVMNALRLQPHATHQNLSEALKVANRIGAKETYLIHMSHH 228 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 + L + V + P V A+DG + Sbjct: 229 IGLHAE-VSEQLPPHVHLAYDGQEI 252 >gi|255535622|ref|YP_003095993.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Flavobacteriaceae bacterium 3519-10] gi|255341818|gb|ACU07931.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Flavobacteriaceae bacterium 3519-10] Length = 254 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 14/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G S G+P I C T+ ++RR RSS +S SN +++D GPDF Sbjct: 3 LKFLGSGTSQGIPVIGCHCEVCSSTDHRDRRMRSSALVST----NSNKKILIDCGPDFRF 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L Q +IDAV+ TH H DH+ G+D LR K + + +Y + + + F Y F Sbjct: 59 QMLDNQEDNIDAVMLTHEHNDHVIGLDDLRPLIFKNRHDMPLYCSARVGNEIKQRFSYAF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 D YP + + E N +E P+ H I GF+ +AY TD Sbjct: 119 A---DVKYPGAPSFQLHEINGSFTLFD-----VEITPVEVMHHLIPIYGFKVNKLAYITD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 +A EKL+NLD+LI++ + K H +HF L + L+ + + PK LTH+ L Sbjct: 171 ASAISDAEKEKLRNLDYLILNCIRKEHPHPAHFILPQILELNKELQPKKMYLTHISHHLG 230 Query: 246 YDMVLKST-PSRVVPAFDGMQFS 267 +S P V A+DG++ Sbjct: 231 RHAQTESELPENVHLAYDGLELE 253 >gi|254796934|ref|YP_003081771.1| metallo-beta-lactamase family protein [Neorickettsia risticii str. Illinois] gi|254590182|gb|ACT69544.1| metallo-beta-lactamase family protein [Neorickettsia risticii str. Illinois] Length = 264 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 26/270 (9%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCG S GVP + C +NP + RTR S+ + S+T +++D PD Q Sbjct: 4 TVLGCGNSSGVPVLGCACSVCLSSNPLDTRTRCSVLV-----ETSSTRLLIDASPDLRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +RE S+D V YTH H DH G L + + I V++ + H+ + Y FK Sbjct: 59 AMREGFSSVDQVFYTHIHFDHHAGTHELSSFATSEGNCIHVFSDEFTISHMENLYGYLFK 118 Query: 128 ------ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GN 180 A+ R Y + + VP + A G + + Q HG I+S G G Sbjct: 119 PEHLSNAMWKRCY--------LSASVVPYYEEFAVGDMLCMIFPQTHGNINSCGIILNGK 170 Query: 181 VAYCTDVNAFPAESLEKLQNLDF--LIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 AYCTDV P +L+ +++L+ +I+ +H + E+L+ I L+ PK+A T Sbjct: 171 FAYCTDVRLIPNRALDIMKSLELEVFVIECFDYEGSYAHSNFVEALEYINLVRPKSAFFT 230 Query: 239 HMHVDLDYDMVLK----STPSRVVPAFDGM 264 HM L YD ++ S S V+PA DG+ Sbjct: 231 HMTHKLAYDDLVTRLKVSGVSHVMPAHDGL 260 >gi|323344252|ref|ZP_08084478.1| lipoate-protein ligase B [Prevotella oralis ATCC 33269] gi|323094981|gb|EFZ37556.1| lipoate-protein ligase B [Prevotella oralis ATCC 33269] Length = 253 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 15/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT LG G S GVP + C T+ ++R RS+ I T +++D+GPD Sbjct: 3 FTFLGTGTSGGVPSLGCACAVCRSTDRHDKRLRSAALIET-----DTTRILIDSGPDIRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ ID VL TH H DH+ GID LR + + I++YA +K L ++ YCF Sbjct: 58 QLMPLPFKKIDGVLLTHIHYDHVAGIDDLRPFCVFGD--INIYADESTVKALKQTMPYCF 115 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YP + P++ + VP + G IE P+ H R+ LG+RFGN AY TD Sbjct: 116 T---EKLYPGV--PLLRLHQIVPHLRRKIGD-IEFTPVQVMHDRLPILGYRFGNFAYITD 169 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + A + L+ ++ L+++AL+ H SH + E+++ + + HM+ + Sbjct: 170 MKTIEATEYKYLRGVNTLVVNALRWEKPHHSHMLVDEAVEFSRRVGARQTYFIHMNHQIG 229 Query: 246 Y-DMVLKSTPSRVVPAFDGMQFS 267 + D + P A+DG+Q + Sbjct: 230 FHDEANRRLPEGFCLAYDGLQIN 252 >gi|317503062|ref|ZP_07961140.1| lipoate-protein ligase B [Prevotella salivae DSM 15606] gi|315665816|gb|EFV05405.1| lipoate-protein ligase B [Prevotella salivae DSM 15606] Length = 255 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 18/261 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP + + C +P +RR R+S+ I S R +++D GPDF MQ Sbjct: 4 TLLGTGTSQGVPVLGCNCEVCKSNDPHDRRFRTSVLIETASTR-----ILIDCGPDFRMQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + IDAVL TH H DH+ GID LR + + I++Y+ D +K L + YCF Sbjct: 59 MLAQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--RFGDINIYSNTDVIKGLKHNMPYCFP 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP + P +I + P + G IE +PI H ++ LG+R G +AY TD+ Sbjct: 117 EKGD-LYPGV--PRLILHEIKPHVGFNIGD-IEVMPITVMHDKLPILGYRIGKLAYITDM 172 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + E L + L+I+AL+ H SH + +++ + K L HM + Sbjct: 173 KNIEEKEFEYLSGISVLVINALRWKREHHSHQLVDDAISFARKLGVKRVFLIHM----TH 228 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ L + + ++P+ G+QF Sbjct: 229 EIGLHAKANLLLPS--GIQFG 247 >gi|218259902|ref|ZP_03475427.1| hypothetical protein PRABACTJOHN_01086 [Parabacteroides johnsonii DSM 18315] gi|218224847|gb|EEC97497.1| hypothetical protein PRABACTJOHN_01086 [Parabacteroides johnsonii DSM 18315] Length = 200 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 10/208 (4%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF QV+R + +DAVL +H H DH+ G+D LR + +++ +DVYA + + + Sbjct: 1 GPDFRWQVIRNKTYHLDAVLISHEHYDHVGGLDDLRPFC--REKGVDVYAEDNVAEAIET 58 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Y F+ YP + N + + P + I P+ HG++ G+R GN Sbjct: 59 RIPYVFRT---HKYPGVPNLELHRIGNEPFMVAG----IPVTPVRVMHGKLPIFGYRIGN 111 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY TDV P E KL+ LD L++ AL+ G H +H SL E+L +E I PK L HM Sbjct: 112 MAYLTDVKYLPEEEYAKLEGLDVLVLTALRLGAHPTHESLEEALANVERIKPKETYLIHM 171 Query: 241 -HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 H + V K P V A+DG+ S Sbjct: 172 SHRIGLHAEVEKELPPHVHLAYDGLHVS 199 >gi|57238878|ref|YP_180014.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] gi|58578807|ref|YP_197019.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] gi|57160957|emb|CAH57863.1| hypothetical protein Erum1470 [Ehrlichia ruminantium str. Welgevonden] gi|58417433|emb|CAI26637.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] Length = 262 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 128/271 (47%), Gaps = 26/271 (9%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G+S GVP I D AC N+RTR+S + T ++VDT PD +Q Sbjct: 4 TILGSGSSSGVPIIGCDCSACKSHLQYNKRTRASALF-----ENNGTKLLVDTTPDLRIQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCF 126 L+ + S+D +LYTH H+DH GI L+ + + + +Y+ + L S Y F Sbjct: 59 ALQHNLSSVDGILYTHFHSDHCDGISDLQPFVPTNELNTVHIYSDVMTLCSLVASNSYFF 118 Query: 127 ------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 K P + E N G + I Q HG GF F N Sbjct: 119 IRGIVSKWKKCHYLTPNIMYYYQEYNI---------GSFRILMIKQDHGVADCNGFIFNN 169 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 VAYCTDV +FP +S + L + LI+ LK +H S++ L+ + + P+ I TH Sbjct: 170 QVAYCTDVKSFPKKSFDLLYKIKVLILGCLKYEESFAHSSVNTCLEWVAELKPETTIFTH 229 Query: 240 MHVDLDYDMVLKSTPSR----VVPAFDGMQF 266 M DL+Y ++ SR V+ +DG+QF Sbjct: 230 MSHDLEYYSLIDYIKSRIDANVIVGYDGLQF 260 >gi|300779057|ref|ZP_07088915.1| lipoate-protein ligase B [Chryseobacterium gleum ATCC 35910] gi|300504567|gb|EFK35707.1| lipoate-protein ligase B [Chryseobacterium gleum ATCC 35910] Length = 271 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 19/263 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I C NPK++R RSS+ ++ N +++D GPDF Q+L Sbjct: 22 LGTGTSQGVPVIGCTCEVCTSENPKDKRLRSSVMVTT----EENKKILIDCGPDFRQQML 77 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 ++D L TH H DH+ G+D +R K + + +Y + F Y F Sbjct: 78 TNHEHTVDIALITHEHNDHVIGLDDMRPLIFKSGKDVPLYCYSRVAHEIKNRFPYAFA-- 135 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP P IEN + E P+ H +I+ G++F +AY TD Sbjct: 136 -DVRYPGAPAFELHEIENKPFEVLD------TEITPVEVIHYKITVFGYKFKKLAYITDA 188 Query: 188 NAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM--HVDL 244 EKL++LD LI++ ++ H +HF L + +K E + PK LTH+ H+ L Sbjct: 189 GFISETEKEKLKDLDVLILNCIRKFDPHPAHFILPDVIKLFEELKPKKLFLTHISHHLGL 248 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 +D+ K P + A DG++ S Sbjct: 249 -HDIEDKELPDGIHLAHDGLELS 270 >gi|301166590|emb|CBW26166.1| putative hydrolase [Bacteriovorax marinus SJ] Length = 271 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 16/266 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G S G+P + D C T +N R R+S+ + E +++++DT PD Sbjct: 8 MTILGSGTSTGIPMVGCDCAVCTSTVKENTRLRTSVYL----ETAQASSILIDTTPDLRH 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L+ ++ +D TH HADH HGID LR F + I +Y C L + F Y Sbjct: 64 QLLKNKINKVDFAFITHDHADHTHGIDDLRPLTFAPKYTSIPIYTYKKCAAQLTQKFPYI 123 Query: 126 FKALDDRTYPPIVNPIV--IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 FKA + P + + ++ +V + + G + HG +LG +AY Sbjct: 124 FKA---KQLPANIGGGIPNLQLMEVDLSGQQKIGAELFEFTMLDHGYTQTLGIIHQKMAY 180 Query: 184 CTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D + +E +E L + L+ LIID + N H +H + + I I PK A L HM+ Sbjct: 181 IIDCHQLSSEQIEDLRKRELELLIIDCVTNHEHKTHLWQERTFEYISQIAPKRAGLIHMN 240 Query: 242 VDLDYDMVLKSTPS----RVVPAFDG 263 L+++ + K + V P +DG Sbjct: 241 HALEHEQLKKDAAASFSFEVFPTYDG 266 >gi|58616866|ref|YP_196065.1| PhnP protein [Ehrlichia ruminantium str. Gardel] gi|58416478|emb|CAI27591.1| PhnP protein [Ehrlichia ruminantium str. Gardel] Length = 262 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 89/271 (32%), Positives = 128/271 (47%), Gaps = 26/271 (9%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILG G+S GVP I D AC N+RTR+S + T ++VDT PD +Q Sbjct: 4 TILGSGSSSGVPIIGCDCSACKSHLQYNKRTRASALF-----ENNGTKLLVDTTPDLRIQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCF 126 L+ + S+D +LYTH H+DH GI L+ + + + +Y+ + L S Y F Sbjct: 59 ALQHNLSSVDGILYTHFHSDHCDGISDLQPFVPTNELNTVHIYSDVMTLCSLVASNSYFF 118 Query: 127 ------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 K P + E N G + I Q HG GF F N Sbjct: 119 IRGIVSKWKKCHYLTPNIMYYYQEYNI---------GNFRILMIKQDHGVADCNGFIFNN 169 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 VAYCTDV +FP +S + L + LI+ LK +H S++ L+ + + P+ I TH Sbjct: 170 QVAYCTDVKSFPKKSFDLLYKIKVLILGCLKYEESFAHSSVNTCLEWVAELKPETTIFTH 229 Query: 240 MHVDLDYDMVLKSTPSR----VVPAFDGMQF 266 M DL+Y ++ SR V+ +DG+QF Sbjct: 230 MSHDLEYYSLIDYIKSRIDANVIVGYDGLQF 260 >gi|288925809|ref|ZP_06419740.1| lipoate-protein ligase B [Prevotella buccae D17] gi|288337464|gb|EFC75819.1| lipoate-protein ligase B [Prevotella buccae D17] Length = 257 Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 14/236 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP + C NPK+ R R++ + +ER T V++D GPD MQ Sbjct: 4 TLLGTGTSGGVPALGCQCEVCRSANPKDHRLRAAALVE--TER---TRVLIDAGPDIRMQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + ID VL TH H DH+ G+D LR Y +DVY + L YCF Sbjct: 59 LLGQSFKKIDGVLLTHVHYDHVAGLDDLRPY-CYAFNGVDVYCDEKVNRGLHYMMPYCFP 117 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + YP P+++ IE + +K G ++ +PIL HG++ G+RFG AY T Sbjct: 118 SDPMMLYPGAPVLSLHTIEAHST---LKI--GELDIMPILVMHGKMPIFGYRFGKFAYIT 172 Query: 186 DVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 D+ E L+ +++L+I+AL+ H SH + +++K I K+ TH+ Sbjct: 173 DMKTMADEEYSYLEGVEYLVINALRWEKPHHSHQLVDDAIKVARKIGVKHTWFTHL 228 >gi|325269833|ref|ZP_08136443.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] gi|324987806|gb|EGC19779.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] Length = 251 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 15/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + V +T +I+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLETV-----HTRIIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y + IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--RLGDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPK---LNLHALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGKLAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 + L L+ ++ L+++AL+ H SH + E+++ I + LTH+ H Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWERPHHSHQLIPEAVEFSRRIGARRTYLTHLTHQVG 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 ++ + P V A+DG++ Sbjct: 228 LHEEAQRRLPDGVFLAYDGLRIK 250 >gi|325856405|ref|ZP_08172121.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] gi|325483589|gb|EGC86561.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] Length = 251 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 130/263 (49%), Gaps = 15/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + + T VI+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLET-----AQTRVIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y + IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--RLGDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPK---LNLHALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGELAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 + L L+ ++ L+++AL+ + H SH + E+++ I + LTH+ H Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWDRPHHSHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 ++ + P + A+DG++ Sbjct: 228 LHEEAQRRLPDGIFLAYDGLKIE 250 >gi|327312492|ref|YP_004327929.1| metallo-beta-lactamase domain-containing protein [Prevotella denticola F0289] gi|326944901|gb|AEA20786.1| metallo-beta-lactamase domain protein [Prevotella denticola F0289] Length = 251 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 15/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + + T VI+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLET-----AQTRVIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y + IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--RLGDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPK---LNLHALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGKLAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDL 244 + L L+ ++ L+++AL+ H SH + E+++ I + LTH+ H Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWERPHHSHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 ++ + P + A+DG++ Sbjct: 228 LHEEAQRRLPDGIFLAYDGLKIE 250 >gi|123975995|ref|XP_001314411.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121896724|gb|EAY01867.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 268 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 22/236 (9%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGPDF 64 T+LG G S G+P + D C T+P+++R R+ LKIS G N V++D G D Sbjct: 11 LTLLGTGTSGGIPFVNCDCPTCTSTDPRDKRYRTCGILKISN----GKN--VLIDCGTDI 64 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +LRE + I+ ++ +H HADH+HG+ L ++ PI +Y C K L + Sbjct: 65 RKCLLREGITHIEGIIISHCHADHVHGLPDLVKFY--NGHPIPIYCNDVCGKQLKGKYST 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + DDR + + I + +C + P+ HG++ G+RFGN Y Sbjct: 123 LVEG-DDRKFD-----VNITTSPFKLCD------VTFTPVPIMHGKLPIFGYRFGNATYI 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 TD P +S + + + L+I+ L N H +H S +SL +I I PK A L HM Sbjct: 171 TDCKTIPNDSYKIIDGSEILVINTLANTDHETHLSYEQSLAEIRKIKPKVAYLVHM 226 >gi|282889984|ref|ZP_06298519.1| hypothetical protein pah_c008o085 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500177|gb|EFB42461.1| hypothetical protein pah_c008o085 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 264 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 9/266 (3%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK FT LG G S+GVP I C +P N+R R S I +E+ +++D Sbjct: 1 MKTTGQFTFLGTGGSMGVPVIGCHCAVCSSPSPFNKRMRPSGLIQLGTEK-----ILIDA 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q L ++ +D V++TH H DH GID LR Y++ + ++ + L Sbjct: 56 GPDHRNQALINRIDRLDGVIFTHAHHDHSAGIDDLRVYYMHTHKALECLMSKATYDELKY 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + Y F+ + ++ ++EN + SA + + G ++ GF+ GN Sbjct: 116 RYAYIFQPQEHYKLTTKMHIHLLENERGKVNFLSA----KLRYFTYEQGGMAVNGFKCGN 171 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +A+ +D+ +P E L + LII AL+ H ++ E+L E K TH+ Sbjct: 172 LAFVSDIRHYPESIFEDLSGTEILIISALRFTPSPLHLTVDEALAFAEKTQAKQVWFTHI 231 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LD++ P V A+DG+ F Sbjct: 232 AHELDHEKTNAYLPEHVRLAYDGLAF 257 >gi|288801260|ref|ZP_06406715.1| lipoate-protein ligase B [Prevotella sp. oral taxon 299 str. F0039] gi|288331871|gb|EFC70354.1| lipoate-protein ligase B [Prevotella sp. oral taxon 299 str. F0039] Length = 254 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 19/262 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP + + C + K++R R+S I NT +++D GPD MQ+L Sbjct: 7 LGTGTSNGVPVLGCNCAVCKSRDSKDKRYRTSALIET-----DNTRIVLDCGPDVRMQLL 61 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + I+AVL +H H DH+ GID LR + Q IDVYA K L ++ YCF Sbjct: 62 QVPFRPINAVLISHIHYDHVAGIDDLRPFC--QFGDIDVYANSSTAKALKQTMPYCFT-- 117 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP P +N IE+ + +E +PI HG++ L +RFG VAY TD+ Sbjct: 118 -DELYPGVPRLNLHTIESGRAFKVNE-----VEILPIKVYHGKLPILAYRFGEVAYITDM 171 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 E L+ L L+++ L+ H SH + E++ + I + LTH+ ++ Sbjct: 172 KTIDDAEKELLKGLKVLVVNGLRWEKEHHSHQLIDEAIAFSKSIGAEKTFLTHVTHEIGL 231 Query: 247 DM-VLKSTPSRVVPAFDGMQFS 267 + K P+ V A+DG++ Sbjct: 232 HVQASKCLPNNVYFAYDGLEIE 253 >gi|328948869|ref|YP_004366206.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] gi|328449193|gb|AEB14909.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] Length = 298 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 54/302 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 + G G S G+P I C ++P++ R R S + S ++VD GP+F +Q Sbjct: 5 LTGTGTSHGIPVIGCGCNVCRSSDPRDNRLRCSAFLE------SPVNILVDVGPEFRIQA 58 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRP---------IDVYAAPDCM 115 L+ ++ IDAV TH HADH+HGID LR + L P + +Y Sbjct: 59 LKYKINKIDAVFITHSHADHLHGIDDLRVFSHTKALDPAHPDNKETEGEGLRIYTTTHAE 118 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIEN--NDVPICMKSAGGVIEAIPILQQHGRISS 173 + F Y F + + P + + EN P+ + IE +P++ +HG + Sbjct: 119 HDIRHRFDYIFTPMKEGGGKPKIQIMSAENISEKNPLFING----IEILPVMLKHGHLDD 174 Query: 174 LGFRFG---------NVAYCTDVNAFPAESLEKLQN----LDFLIIDALKNGLHSSHFSL 220 LG F ++AY TD + P S+E ++N L+ L+ID L+ HS+HFS Sbjct: 175 LGLLFSEKGQDGKKHSIAYLTDCSFVPENSIELVKNNSGILEHLVIDGLRLEPHSTHFSF 234 Query: 221 SESLKKIELINPKNAILTHM-----HVDLD---------YDMVLKSTPS--RVVPAFDGM 264 ++L+ + +NP+N LTH+ HV ++ + ++ KS + + PA+DG+ Sbjct: 235 EQALEAAQKMNPRNVYLTHITHNMSHVQIEDYVKSILWKFPLLKKSAENGFYIGPAYDGL 294 Query: 265 QF 266 + Sbjct: 295 EL 296 >gi|315608237|ref|ZP_07883227.1| lipoate-protein ligase B [Prevotella buccae ATCC 33574] gi|315250018|gb|EFU30017.1| lipoate-protein ligase B [Prevotella buccae ATCC 33574] Length = 257 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 14/236 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP + C NPK+ R R++ + +ER T V++D GPD MQ Sbjct: 4 TLLGTGTSGGVPALGCQCEVCRSANPKDHRLRAAALVE--TER---TRVLIDAGPDIRMQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + ID VL TH H DH+ G+D LR Y +DVY + L YCF Sbjct: 59 LLGQSFKKIDGVLLTHVHYDHVAGLDDLRPY-CYAFNGVDVYCDEKVNRGLHYMMPYCFP 117 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + YP P+++ IE + +K G ++ +PIL HG++ G+RFG AY T Sbjct: 118 SDPMMLYPGAPVLSLHTIEAHST---LKI--GELDIMPILVMHGKMPIFGYRFGKFAYIT 172 Query: 186 DVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 D+ E + +++L+I+AL+ H SH + +++K I K+ TH+ Sbjct: 173 DMKTMADEEYSYFEGVEYLVINALRWEKPHHSHQLVDDAIKVARKIGVKHTWFTHL 228 >gi|330996961|ref|ZP_08320826.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329572035|gb|EGG53706.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 255 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 16/260 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP+I C T+ +++R R+S+ + T +++D GPDF Sbjct: 3 ITFLGTGTSTGVPQIGCSCKVCRSTDARDKRLRTSVLVET-----EQTRILLDCGPDFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L IDAVL TH H DH+ GID LR + + + +YA+ L +S YCF Sbjct: 58 QILPLDFRRIDAVLLTHEHYDHVGGIDDLRPFGVFGD--VQLYASERTGGQLRQSLPYCF 115 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + V G ++ PI H R+ LG+R G +AY TD Sbjct: 116 V---EHKYPGVPQ---LRLHAVRPHEAFRVGELQVTPIEVMHARLPILGYRVGRMAYITD 169 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDL 244 + L+ LQ L+ L+++ L++ H SH ++ E+ + L HM H+DL Sbjct: 170 MKTIADCELDYLQGLELLVLNGLRHEPHYSHQTIEEACAFARRLRVPRTYLIHMGHHIDL 229 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 + + S P V A+DG+ Sbjct: 230 -HAVEDASLPEGVRMAYDGL 248 >gi|167751926|ref|ZP_02424053.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] gi|167660167|gb|EDS04297.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] Length = 222 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/228 (34%), Positives = 114/228 (50%), Gaps = 27/228 (11%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPIDVY 109 + +++D GPDF Q+LR V IDA+L TH H DHI G+D +R + IDV+ Sbjct: 6 DIRLVIDAGPDFRYQMLRTGVRHIDAILLTHEHKDHIGGLDDVRAFNFVDYPTIHRIDVF 65 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPIL 165 +K + + F Y F R P I ++P V P C+K E IP+ Sbjct: 66 GTRQTLKCVRKDFDYAFSVDKYRGVPEIELCEIDPAV------PFCVKDK----EVIPVS 115 Query: 166 QQHG-RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 H R GFRFG +AY TD KL ++ L+++AL+ H SHFSL E+L Sbjct: 116 GHHSPRFEVTGFRFGELAYLTDFKTIAPAEERKLYGVEVLVVNALRPQPHDSHFSLDEAL 175 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP-----AFDGMQFS 267 I + P+ A LTHM ++M L + S ++P A+DG++ + Sbjct: 176 ALIRRVAPRRAYLTHM----SHEMGLYAERSALLPEGVYLAYDGLEIN 219 >gi|282877691|ref|ZP_06286506.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] gi|281300263|gb|EFA92617.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] Length = 253 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 23/265 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C+ T+P ++R R++ + + R +++D GPD Sbjct: 3 LTFLGTGTSGGVPSLGCHCAVCESTDPHDKRLRTAALLETQTTR-----ILIDCGPDIRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ +D VL TH H DH+ GID LR + + + V+A + L ++ YCF Sbjct: 58 QLMPFTFTPLDGVLLTHVHYDHVAGIDDLRPFCVFGS--VHVFADQQTVDQLHQTMPYCF 115 Query: 127 KALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 ++ YP + + P+V P+ + G +E +P H ++ LG+RFG++A Sbjct: 116 T---EKLYPGVPRLDLTPVVPHQ---PLIV----GDVEVLPFQVMHDKLPILGYRFGSLA 165 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD+ L+ +D L+++AL+ H SH ++ E++ + I HM+ Sbjct: 166 YITDMKTIDDAEYAYLEGIDTLVVNALRYQPQHHSHMTVDEAVAFAKRIGAHRTYFVHMN 225 Query: 242 VDLDY-DMVLKSTPSRVVPAFDGMQ 265 D+ + + V K P+ + A+DG+Q Sbjct: 226 HDVGFHEEVNKQLPAGMQLAYDGLQ 250 >gi|300728185|ref|ZP_07061556.1| lipoate-protein ligase B [Prevotella bryantii B14] gi|299774611|gb|EFI71232.1| lipoate-protein ligase B [Prevotella bryantii B14] Length = 261 Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 11/266 (4%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M H T+LG G S GVP + + C +P++ R R + I +T +++D Sbjct: 1 MSKSLHITLLGTGTSQGVPVLGCECDVCRSQDPRDHRLRCAALIE-----DEHTRILIDA 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L+ IDAVL TH H DH+ G+D LR Y K I+++ + L + Sbjct: 56 GPDIRQQLLQVPFRKIDAVLVTHAHYDHVGGMDDLRPY-CKAFGDINIFGNETAIVSLRQ 114 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 YCF YP + ++ + + K + G IE PI H ++ LG+RFG Sbjct: 115 MLPYCFPKDASLLYPGVPK---LKLHSIKPHEKLSFGEIEITPISVMHDKLPILGYRFGK 171 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTH 239 AY TD+ + E L + L+++AL+ + H SH + +++ + IN + L H Sbjct: 172 FAYITDMKSMDNEEYTYLSGVKVLVVNALRFDKPHHSHQLVDDAIALAQKINAQKVYLIH 231 Query: 240 MHVDLD-YDMVLKSTPSRVVPAFDGM 264 + D+ + K P + A+DGM Sbjct: 232 VTHDIGIHCEANKKLPEGICFAYDGM 257 >gi|282859632|ref|ZP_06268734.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] gi|282587550|gb|EFB92753.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] Length = 257 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 119/243 (48%), Gaps = 18/243 (7%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK+ T LG G S GVP I C T+P ++R RSS I NT +++D Sbjct: 1 MKNNIKVTFLGTGTSNGVPFIGCKCEVCTSTDPHDKRLRSSALIET-----ENTRLLIDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + ID VL TH H DH+ GID LR + IDVYA + L Sbjct: 56 GPDFRQQILPQPFRKIDGVLLTHIHYDHVGGIDDLRAFCALGD--IDVYANKHTCEGLHH 113 Query: 121 SFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + YCF D YP P +N +E + K G E P HG++ LG+R Sbjct: 114 NIPYCFT---DHLYPGVPKLNLHSVEPH-----QKLHIGDFEVEPFEVIHGKLPILGYRI 165 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAIL 237 G++AY TD+ + + L L+ + LII+ L+ + H SH + E++ + I + L Sbjct: 166 GSLAYITDMKSIEDKELLSLKGIKTLIINGLRWDRPHHSHQLIPEAITFSKQIKAEQTYL 225 Query: 238 THM 240 HM Sbjct: 226 IHM 228 >gi|303237770|ref|ZP_07324329.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] gi|302482056|gb|EFL45092.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] Length = 258 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 19/262 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP + C NPK++R R+S + T +++D GPDF Q+L Sbjct: 11 LGTGTSNGVPVVGCTCNVCKSNNPKDKRLRTSALVET-----DQTRILIDCGPDFRQQIL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 ID +L TH H DH+ GID LR Y ID++ D + L + YCFK Sbjct: 66 PLPYRKIDGILVTHIHYDHVGGIDDLRPYCWLGD--IDIFTNEDTCQGLRHNLPYCFK-- 121 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YP P++N ++ ++V A IE + HGR+ LG+R G + Y TD+ Sbjct: 122 -ENPYPGVPVLNLHAVQPHEVFTIGDCAIQPIEVM-----HGRLPILGYRIGKLVYITDM 175 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD- 245 L L+ ++ L++ AL+ H SH + +++ + I+ K LTH+ + Sbjct: 176 KTINPSELPYLEGIETLVVSALRWEKEHHSHQLIKDAIAFSQQIHAKQTYLTHLTHQIGL 235 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 +D P V A+DG++ Sbjct: 236 HDDASNLLPENVHLAYDGLEIE 257 >gi|288802875|ref|ZP_06408312.1| lipoate-protein ligase B [Prevotella melaninogenica D18] gi|288334692|gb|EFC73130.1| lipoate-protein ligase B [Prevotella melaninogenica D18] Length = 276 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 84/256 (32%), Positives = 130/256 (50%), Gaps = 19/256 (7%) Query: 15 SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 S GVP + C +P++ R R+S + + T +++D+GPDF Q+L + Sbjct: 34 SNGVPVLGCSCDVCKSKDPRDNRLRTSALLET-----AKTRIVIDSGPDFRQQMLPQPFR 88 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ID +L TH H DH+ GID +R Y I+VYA + L +F YCF D Y Sbjct: 89 KIDGLLITHIHYDHVGGIDDVRPYCALGN--IEVYANENTCDGLRHNFPYCFT---DNPY 143 Query: 135 P--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P P +N I+ + +K G IE +PI HG + LG+RFG +AY TD+ Sbjct: 144 PGVPKLNLHSIQPH-----VKFMIGDIEVMPISVMHGGLPILGYRFGKLAYITDMKTIKD 198 Query: 193 ESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDYDMVL 250 E L L+ ++ L+++AL+ H SH +SE++ I K LTH+ H ++ Sbjct: 199 EELPYLEGVETLVVNALRWEREHHSHQLISEAIDFSRKIGAKRTYLTHLTHKIGLHEEAQ 258 Query: 251 KSTPSRVVPAFDGMQF 266 K P+ + A+DG++ Sbjct: 259 KLLPNDIFFAYDGLKI 274 >gi|270296409|ref|ZP_06202609.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273813|gb|EFA19675.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 241 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 22/254 (8%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-I 76 +P I C T+P++ R R+S + + +++D GPDF Q+LR I Sbjct: 1 MPEIGCTCPVCTSTDPRDNRLRASSLLHT-----DDAVILIDCGPDFREQMLRASSFEKI 55 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFRYCFKALDDRTY 134 D VL TH H DH+ G+D LR + PI D Y A HL YCF D+ Y Sbjct: 56 DGVLVTHEHYDHVGGLDDLRPFGRFADIPIYSDAYTA----AHLRARMPYCFV---DKVY 108 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAE 193 P + I +V E +P+ HGR+ LG+R G + Y TD++ P E Sbjct: 109 PGVPR---IYLQEVEAGQAFHINRTEVLPLRVMHGRLPILGYRIGGRLGYITDMHMMPEE 165 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDLDYDMVLK 251 S E+L+ LD L+++AL+ H +H S+SE+L+ I K HM H L D + K Sbjct: 166 SYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHHAGLHAD-IEK 224 Query: 252 STPSRVVPAFDGMQ 265 P V A+DG++ Sbjct: 225 LLPPHVHFAYDGLE 238 >gi|332180861|gb|AEE16549.1| beta-lactamase domain protein [Treponema brennaborense DSM 12168] Length = 302 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 35/294 (11%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVS-ERGSNTTVIVDTGPDFYMQ 67 +LG G S G+P I C ++ +++R RSSL I+ S + G+ T++I+DTGP+F +Q Sbjct: 5 LLGTGTSHGIPVIGCSCPCCTSSDARDKRLRSSLWITDGSADSGAYTSIIIDTGPEFRIQ 64 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL--------KQKRPIDVYAAPDCMKHLF 119 LR + +DAV TH HADH++G+D +R + + VY + + Sbjct: 65 ALRFGIKKLDAVFLTHGHADHLNGLDDVRIFSHTCPGAAADSSDAGLPVYGNAQTITDVH 124 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 E F Y F + P ++ +V ++ +K+ G + IP+ HG + + G+ Sbjct: 125 ERFSYIFHPPTEGGGTPKLHTVVCSSSRDAEGIKA--GSLTLIPVPLLHGSLETTGWLVS 182 Query: 180 N----VAYCTDVNAFPAESLEKLQN----LDFLIIDALKNGLHSSHFSLSESLKKIELIN 231 + VAY TD + P S+ LQ+ ++ LIID L+ H +H S ES+ Sbjct: 183 DGRSSVAYLTDCSVIPDYSIALLQSQRTPIEHLIIDGLRRRPHDTHLSFDESIAYALRAG 242 Query: 232 PKNAILTHM-----HVDLD-----YDMVLKSTPSR------VVPAFDGMQFSSP 269 K+ LTH+ H ++D YD+ + +R V PA+DG+ P Sbjct: 243 AKHIWLTHICHDMKHEEIDSYVRAYDLRHTDSENRTCRASTVAPAYDGLVLRVP 296 >gi|160882261|ref|ZP_02063264.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] gi|156112350|gb|EDO14095.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] Length = 219 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 107/218 (49%), Gaps = 19/218 (8%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 + +++D GPDF QVLR ID VL TH H DH+ G+D LR + PI YA Sbjct: 11 DARILIDCGPDFRTQVLRLPFEKIDGVLITHEHYDHVGGLDDLRPFCRFGSVPI--YAEN 68 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQQ 167 + L YCF D YP + D+P+ S G E +P+ Sbjct: 69 YVAQGLRLRMPYCFV---DHRYPGV--------PDIPLQEISVGQAFSVNHTEVLPLRVM 117 Query: 168 HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKI 227 HGR+ LG+R G + Y TD+ P ES E+L +D L+++AL+ H +H +L E+L Sbjct: 118 HGRLPILGYRIGQLGYITDMLTMPEESYEQLAGIDVLVVNALRIATHPTHQNLEEALAVA 177 Query: 228 ELINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGM 264 + I K HM D+ + V KS P + AFDG+ Sbjct: 178 QRIQAKKTYFIHMSHDMGLHAEVEKSLPENIHLAFDGL 215 >gi|260591612|ref|ZP_05857070.1| lipoate-protein ligase B [Prevotella veroralis F0319] gi|260536412|gb|EEX19029.1| lipoate-protein ligase B [Prevotella veroralis F0319] Length = 260 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 15/262 (5%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 + T LG G S GVP + + C T+P+++R R+S + NT +I+D+GPDF Sbjct: 9 YLTFLGTGTSNGVPVLGCNCEVCRSTDPRDKRLRTSALLET-----ENTRIIIDSGPDFR 63 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + ID +L TH H DH+ GID +R Y Q IDVYA D L +F YC Sbjct: 64 QQMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--QLGDIDVYANEDTCAGLRHNFPYC 121 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + YP + +E + + G + +PI HG++ +R G +AY T Sbjct: 122 FT---EHLYPGVPK---LELHAIQPHSHFRIGDFDVVPINVMHGKLPIFAYRIGKLAYIT 175 Query: 186 DVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+ L+ ++ L+++ L+ H SH + E+++ + I K LTH+ + Sbjct: 176 DMKTIDESEFPYLEGVETLVVNGLRWTREHHSHQLIPEAIEFSKRICAKQTYLTHLTHQI 235 Query: 245 D-YDMVLKSTPSRVVPAFDGMQ 265 ++ P+ A+DG++ Sbjct: 236 GLHEEAQHYLPNGFFFAYDGLK 257 >gi|297621461|ref|YP_003709598.1| putative metal-dependent hydrolase, beta- lactamase superfamily I [Waddlia chondrophila WSU 86-1044] gi|297376762|gb|ADI38592.1| putative metal-dependent hydrolase, beta- lactamase superfamily I [Waddlia chondrophila WSU 86-1044] Length = 246 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 19/257 (7%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 +GVP I C + KN+RTR S + + +++D GPDF Q LRE++ Sbjct: 1 MGVPIIGCRCPVCLSKDEKNKRTRPSAFL-----KAKGKAIVIDAGPDFRTQALREEISH 55 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 ID V++TH H DH G+D LR + +++ PI + L + Y F+ + Sbjct: 56 IDGVIFTHAHHDHTAGLDDLRVFTIRRSNPIPCLLSEKTANDLKRRYDYIFREGGESKLV 115 Query: 136 PIVNPIVIENND-----VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 V ++E + I + + Q G + + GF+ GN+A+ TD+ F Sbjct: 116 SKVELQILEEERGETHFLDISFRYLSYI--------QSGMLVN-GFKVGNLAFITDIKNF 166 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + LQ L++ AL++G H ++ E+L + + LTH+ +LD++ Sbjct: 167 SETIYDDLQGTKVLVVSALRHGPSHMHLTVEEALAFSRKVGAEQTWLTHIAHELDHEQTN 226 Query: 251 KSTPSRVVPAFDGMQFS 267 +S PS V A+DG+ S Sbjct: 227 RSLPSNVQLAYDGLTIS 243 >gi|182413874|ref|YP_001818940.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177841088|gb|ACB75340.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 259 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 21/266 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S GVP I D C +P+N+RTR+S+ + V VD P+F +Q L Sbjct: 6 LGTGTSQGVPMIGCDCAVCRSPDPRNKRTRTSVHVVM-----DGLHVQVDAAPEFRLQCL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 + +D + TH HADHI G+D LR + L +R +DVY + M F Y Sbjct: 61 ACDIRWVDFFILTHGHADHITGMDDLRRFCDLLGERALDVYTTDEGMSRTLSLFPYAVAE 120 Query: 129 LD-DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------V 181 R Y ++ D+P G IE+ L HGR+++LG F Sbjct: 121 RPIARGYAAFKLALMPPKRDLP------QGTIEST--LLPHGRLNTLGLVFTERSSGRKF 172 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD P E++ + D +++D L+ H SH S+ E++ + I K LTH+ Sbjct: 173 VYYTDCKTVPPEAIALARGADVVVLDGLRTDPHPSHMSIPEAIAVAQEIGAKQTWLTHLT 232 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFS 267 D+ + P+ + A+DG++ + Sbjct: 233 HLNDHAITEAELPAGIRLAYDGLRLT 258 >gi|307565645|ref|ZP_07628123.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] gi|307345677|gb|EFN91036.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] Length = 257 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 90/270 (33%), Positives = 124/270 (45%), Gaps = 19/270 (7%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK T LG G S GVP I + C T+P ++R R+S I NT ++VD Sbjct: 1 MKHNMKVTFLGTGTSNGVPFIGCNCEVCKSTDPHDKRLRTSALIET-----ENTRLLVDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L ID VL TH H DH+ GID LR + ID+Y+ L Sbjct: 56 GPDFRQQILPYPFRKIDGVLLTHIHYDHVGGIDDLRAFC--SLGDIDIYSNKHTCDGLRH 113 Query: 121 SFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + YCF D YP P +N IE + K + G E PI HG++ L +R Sbjct: 114 NMPYCFT---DHLYPGVPKLNLHCIEPHQ-----KFSIGDFEIEPIEVIHGKLPILAYRI 165 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAIL 237 G +AY TD+ + L+ + LII+ L+ H SH + E++ +LI + L Sbjct: 166 GTLAYITDMKTINPVEVPSLKGVKTLIINGLRWERPHHSHQLIPEAIAFSQLIKAEQTYL 225 Query: 238 THMHVDLDYDM-VLKSTPSRVVPAFDGMQF 266 HM + K P V A+DG+ Sbjct: 226 IHMTDKAGFHAESQKRLPDNVHFAYDGLTL 255 >gi|46447401|ref|YP_008766.1| putative phnP protein [Candidatus Protochlamydia amoebophila UWE25] gi|46401042|emb|CAF24491.1| putative phnP protein [Candidatus Protochlamydia amoebophila UWE25] Length = 238 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 27/247 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C ++ N+R R S + + ++D GPDF +Q LR ++ ++D V+ TH H D Sbjct: 2 CHSSSSFNQRLRPSALV-----KTHFKQFLIDVGPDFRLQALRHRIHALDGVILTHAHQD 56 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF--------KALDDRTYPPIVN 139 H GID LR + K+ P+ + + + + + Y F + L +T P ++ Sbjct: 57 HTAGIDDLRPIYYKRITPLPILLSEITRIDIQQRYHYLFATEKKDFIQRLHLQTLPSLIE 116 Query: 140 -PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + E + GG ++ GFRFG++AY +D+ FP +L Sbjct: 117 GSVTFEGTSINYMTYEQGG-------------MAVNGFRFGDLAYLSDIRTFPQTIFTQL 163 Query: 199 QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 Q+L L+I ALK HFS+ E+L I ++ LTH+ +LD+D V P V Sbjct: 164 QDLKILVISALKYTASQLHFSIDEALDFANKIGAESVWLTHLSHELDHDKVNAYLPKHVR 223 Query: 259 PAFDGMQ 265 A+DG++ Sbjct: 224 LAYDGLE 230 >gi|282881697|ref|ZP_06290360.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] gi|281304456|gb|EFA96553.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] Length = 253 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 21/266 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C+ +P ++R R++ + T +++D GPD Sbjct: 3 LTFLGTGTSGGVPSLGCHCAVCESHDPHDKRLRTAALLET-----DTTRILIDCGPDIRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ +DAVL TH H DH+ GID LR + + + +YA + L + YCF Sbjct: 58 QLMPFPFQPLDAVLLTHIHYDHVAGIDDLRPFCVFDS--LQIYADEPTAEALHRTMPYCF 115 Query: 127 KALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 A YP P+++ V++ + + G I+ +P H ++ LGFRFG+ AY Sbjct: 116 GA---HLYPGVPLLDLHVVQPHQ-----ELRIGDIDIMPFQVMHHKLPILGFRFGSFAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH-- 241 TD+ E + L + L+++AL+ H SH +++E+++ + K L HM Sbjct: 168 TDMKTIRDEEMPFLSGVKTLVVNALRYEPQHHSHMTVAEAIEFTNRVGAKQTYLVHMSHG 227 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFS 267 + L +D+ L+ P + A+DG+Q Sbjct: 228 IGLHHDVNLQ-LPDDIQLAYDGLQIE 252 >gi|294054974|ref|YP_003548632.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] gi|293614307|gb|ADE54462.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] Length = 259 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 19/268 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G S GVP I CD NPKN RTR S+ + E G + + VD +F + Sbjct: 3 LIFLGTGTSQGVPMIAQPESGCDMNNPKNWRTRCSIHV----ELGGHH-IQVDAAQEFRI 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYC 125 Q L + ID + THPHADHI G+D LR + L + VY++P ++ + E F Y Sbjct: 58 QCLNSGIDQIDTFMLTHPHADHILGMDDLRRFCDLNGGAALPVYSSPMGLRRVQEIFPYA 117 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----- 180 R P + +++P ++ GG++E++ + HG + LG F Sbjct: 118 I-----RDKPVVRGYPAFSLHEMPKELELPGGLVESVYL--PHGPMEVLGLVFTENDTGK 170 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +AY TD E+ + D +++D L+ H SH ++ E+ + + + LTH Sbjct: 171 KLAYFTDCKEVGEEARLIAEGADVVVLDGLRPEPHPSHMTIGEATQTALEMGAPVSFLTH 230 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 M +D++ P + A+DG++ S Sbjct: 231 MTYLVDHESTEAQLPENIHLAYDGLRVS 258 >gi|281423122|ref|ZP_06254035.1| lipoate-protein ligase B [Prevotella oris F0302] gi|281402458|gb|EFB33289.1| lipoate-protein ligase B [Prevotella oris F0302] Length = 255 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 18/261 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G S GVP + + C ++P++ R R+S I S R +++D GPDF Q Sbjct: 4 VLLGTGTSQGVPVLGCNCEVCKSSDPRDHRFRTSALIETESTR-----ILIDCGPDFREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + IDAVL TH H DH+ GID LR + + ID+Y D + L + YCF Sbjct: 59 MLLQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--KFGDIDIYTDSDVIHGLKHNMPYCFP 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP + P +I + P S G I+ +PI H + LGFR G +AY TD+ Sbjct: 117 TNGD-LYPGV--PRLILHEIRPHERFSVGD-IDIVPITVMHDTLPVLGFRMGKLAYITDM 172 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L L ++ L+++ L+ H SH + +++ +++ K L HM + Sbjct: 173 KRIEETELSYLAGIEVLVVNGLRWKREHHSHQLIDDAIAFSKVLGVKRVYLIHM----TH 228 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ L + R++P G++F Sbjct: 229 EIGLHNEAGRLLPH--GVEFG 247 >gi|224026015|ref|ZP_03644381.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] gi|224019251|gb|EEF77249.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] Length = 220 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 9/217 (4%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D GPDF Q++R + IDAVL TH H DH+ G+D LR + P VYA Sbjct: 5 NGVRILIDCGPDFREQMIRMDDYRPIDAVLITHEHYDHVGGLDDLRPFCRFGDIP--VYA 62 Query: 111 APDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 L YCF + YP P + VIE S G +E +P H Sbjct: 63 EAYTADRLQARIPYCFT---ENLYPGVPHIPLHVIEAGKPFTVSNSYGHSVEILPFRVMH 119 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 G++ +G+R G +A+ TD+ PA S L+NLD L+I+AL+ H +H ++ E+L +I Sbjct: 120 GKLPIMGYRIGEMAWITDMLTMPAASYACLKNLDCLVINALRQEQHPTHQTVREALAQIS 179 Query: 229 LINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGM 264 I P+ A L H + + V K P V +DGM Sbjct: 180 CIQPEEAFLIHASHQIGLHAEVEKELPPHVHLTYDGM 216 >gi|229496718|ref|ZP_04390430.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] gi|229316366|gb|EEN82287.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] Length = 512 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 19/270 (7%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+ ILG G S GVP + C T+P + RTR+S+ + E +++D Sbjct: 4 KEIRSVRILGSGTSTGVPEVGCYCSTCLSTDPADNRTRTSVLL----ETNEGKKILLDCS 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q + ++ +DA++ +H H DHI G+D LR + R + +YA + E+ Sbjct: 60 PDFRQQAILAEIDELDAIVLSHEHYDHIAGLDDLRT--IAWARDLPIYAE----NRVLEA 113 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRISSLGFRFGN 180 RY +T P + ++ ++ + + G E I + HGR+ GFR G+ Sbjct: 114 IRYRLHYYFGKT--PYLGTPRLKLREISLAPFEVEGLTFEPIRVF--HGRLPITGFRIGD 169 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTH 239 A+ TD+ P E +EKL+ +D L+++ L+ H +H ++ E++ + + +N + H Sbjct: 170 FAFITDLKTIPDEEVEKLRGVDTLLVNGLRFTKPHPTHQTIEEAIALSKEVQARNTFIIH 229 Query: 240 M--HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 + H D+ ++ P V ++DG++ Sbjct: 230 LSHHAPRAVDLA-QTLPEGVFASYDGLRLE 258 >gi|299140620|ref|ZP_07033758.1| lipoate-protein ligase B [Prevotella oris C735] gi|298577586|gb|EFI49454.1| lipoate-protein ligase B [Prevotella oris C735] Length = 255 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 18/261 (6%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G S GVP + + C ++P++ R R+S I S R +++D GPDF Q Sbjct: 4 VLLGTGTSQGVPVLGCNCEVCKSSDPRDHRFRTSALIETESTR-----ILIDCGPDFREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + IDAVL TH H DH+ GID LR + + ID+Y + + L + YCF Sbjct: 59 MLLQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--KFGDIDIYTDSNVIHGLKHNMPYCFP 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D YP + P +I + P S G I+ +PI H + LGF+ G +AY TD+ Sbjct: 117 TNGD-LYPGV--PRLILHEIRPHERFSVGD-IDIVPITVMHDTLPVLGFKMGKLAYITDM 172 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L L ++ L+++ L+ H SH + +++ +++ K L HM + Sbjct: 173 KRIEETELSYLAGIEVLVVNGLRWKREHHSHQLIDDAIAFSKVLGVKRVYLIHM----TH 228 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ L + R++P G++F Sbjct: 229 EIGLHNEAGRLLPY--GVEFG 247 >gi|254442283|ref|ZP_05055759.1| hypothetical protein VDG1235_516 [Verrucomicrobiae bacterium DG1235] gi|198256591|gb|EDY80899.1| hypothetical protein VDG1235_516 [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 20/263 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S GVP I D C +P+N R R+ + + + +D P+F ++ L Sbjct: 6 MGTGTSQGVPMIGCDCAVCCSEDPRNTRFRTHVHVEM-----GGLNIQIDAAPEFRLRAL 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFK- 127 + +D L TH HADHI G D LR Y L++ I VY++ + ++ L E + Y + Sbjct: 61 EMGIPKVDLALLTHGHADHIQGFDDLRQYCELRRGEAIPVYSSEEGLRRLREIYPYAMRD 120 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------V 181 + YP ++ D + AG V Q HGR +LGF F Sbjct: 121 KAAIKGYPAFRGELMPRVLD----LGEAGRVYST---RQAHGRFETLGFVFEESVSGRRF 173 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD ++ AE+ E + D +++D L+ H SH ++ E+ + I + L HM Sbjct: 174 VYYTDCSSVSAEAEELARGADLVVLDGLRPMDHPSHMTVGEAAEAASRIGGGQSYLIHMT 233 Query: 242 VDLDYDMVLKSTPSRVVPAFDGM 264 +D+ +V P V ++DG+ Sbjct: 234 HHIDHGIVDTELPDGVNLSYDGL 256 >gi|188994995|ref|YP_001929247.1| putative hydrolase [Porphyromonas gingivalis ATCC 33277] gi|188594675|dbj|BAG33650.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 492 Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 20/262 (7%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C + ++RTR+SL I +++ G +++D PDF Q Sbjct: 5 LLGSGTSTGVPEVGCHCRVCRSKDRHDKRTRTSLLI--ITDAGKR--ILIDCSPDFRQQA 60 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + S+DAVL TH H DHI G+D LR + R + VYA + + + + Y F+ Sbjct: 61 LFAGIDSLDAVLLTHEHFDHIGGLDDLRT--ICWHRELAVYAEQNVLDSIRDRLHYVFRK 118 Query: 129 LDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YP P++ ++ D+P + A +E + I+ HGR+ LG++ G +A+ TD Sbjct: 119 ---NPYPGTPLLKLCEVK-PDMP--FQVADLTVEPLRIM--HGRLPILGYKIGKMAFLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM--HVD 243 + AE +E L++ L I+ L+ H SH ++ +++ I I ++L H+ H Sbjct: 171 MKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAINTIGQIGNPESVLIHLSHHAP 230 Query: 244 LDYDMVLKSTPSRVVPAFDGMQ 265 L + L+ P + +DG++ Sbjct: 231 LHQEH-LEILPPHIHSGYDGLE 251 >gi|311747666|ref|ZP_07721451.1| lipoate-protein ligase B [Algoriphagus sp. PR1] gi|311302689|gb|EAZ79963.2| lipoate-protein ligase B [Algoriphagus sp. PR1] Length = 196 Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 12/205 (5%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR + +D VL+TH H DH G+D +R + Q++ + ++ ++ + F Y F Sbjct: 1 MLRAGIKRLDGVLFTHEHKDHTAGLDDIRPFNFAQQKDMPIFGRQQVLEQIKREFAYVFS 60 Query: 128 ALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + + YP P ++P+ I I G I IP+L H ++ LGFR G+ Y T Sbjct: 61 S---KKYPGVPQIDPVEITEKAFSI----EGIQITPIPVL--HYKLPVLGFRIGDFTYIT 111 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D N P ESL+ ++ L+++AL+ H SHF+L E++ + I + LTH+ L Sbjct: 112 DTNHIPEESLKLIEGTKVLVLNALQKTPHISHFTLEEAVDMAQKIGAETTYLTHISHKLG 171 Query: 246 Y-DMVLKSTPSRVVPAFDGMQFSSP 269 + + + PS + A+DG+Q + P Sbjct: 172 LQEEIDQELPSGISLAYDGLQVTLP 196 >gi|34541031|ref|NP_905510.1| lipoate-protein ligase B [Porphyromonas gingivalis W83] gi|39931715|sp|Q7MUY1|LIPB_PORGI RecName: Full=Octanoyltransferase; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase gi|34397346|gb|AAQ66409.1| lipoate-protein ligase B [Porphyromonas gingivalis W83] Length = 492 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 135/262 (51%), Gaps = 20/262 (7%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C + ++RTR+SL I +++ G +++D PDF Q Sbjct: 5 LLGSGTSTGVPEVGCHCRVCRSEDRHDKRTRTSLLI--ITDAGKR--ILIDCSPDFRQQA 60 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + S+DAVL TH H DH+ G+D LR + R + VYA + + + + Y F+ Sbjct: 61 LFAGIDSLDAVLLTHEHFDHVGGLDDLRT--ICWHRELAVYAEQNVLDSIRDRLHYVFRK 118 Query: 129 LDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YP P++ ++ D+P + A +E + I+ HGR+ LG++ G +A+ TD Sbjct: 119 ---NPYPGTPLLKLCEVK-PDMP--FQVADLTVEPLRIM--HGRLPILGYKIGEMAFLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM--HVD 243 + AE +E L++ L I+ L+ H SH ++ +++ I I ++L H+ H Sbjct: 171 MKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAIDTIGQIGNPESVLIHLSHHAP 230 Query: 244 LDYDMVLKSTPSRVVPAFDGMQ 265 L + L+ P + +DG++ Sbjct: 231 LHQEH-LEILPPHIHSGYDGLE 251 >gi|225442301|ref|XP_002280465.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743093|emb|CBI35960.3| unnamed protein product [Vitis vinifera] Length = 350 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 26/258 (10%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR+ T C DP++ KNRR +S+ I S G T+++D Sbjct: 73 LGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSS-KNRRLNTSILIRYPSSSG-GCTILID 130 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY LR + +IDAV+ TH HAD I G+D LR + + I +Y AP Sbjct: 131 VGKFFYHSALRWFPTFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAP--- 187 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHG-RIS 172 FE + L D + I+ + I + V ++ IP+ HG Sbjct: 188 -RDFEVMKKTHYYLVDTSV--IIPGAAVSELQFNIIHEEPFIVHDLKVIPLPVWHGPGYR 244 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELIN 231 SLGFRFGN+ Y +DV+ P E+ L+N + L++DAL+ S +HF L +L ++ I Sbjct: 245 SLGFRFGNICYISDVSEIPEETYPLLKNCEILVLDALRPDRSSATHFGLPRALDEVRKIQ 304 Query: 232 PKNAILTHMHVDLDYDMV 249 PK + T M +D++ V Sbjct: 305 PKRTLFTGMMHLMDHEKV 322 >gi|304382894|ref|ZP_07365376.1| lipoate-protein ligase B [Prevotella marshii DSM 16973] gi|304335919|gb|EFM02167.1| lipoate-protein ligase B [Prevotella marshii DSM 16973] Length = 254 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 120/259 (46%), Gaps = 15/259 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S GVP I + C T+P ++R R+S + T +++D GPDF Sbjct: 3 LTLLGTGTSGGVPSIGCNCPVCRSTDPHDKRLRTSALLET-----DTTRILIDCGPDFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L IDAVL TH H DH+ GID LR + I +Y L + YCF Sbjct: 58 QILPHPFRKIDAVLLTHIHYDHVAGIDDLRPFCTFGD--IQLYGDEATTGGLRHNMPYCF 115 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 YP + P++ + VP G I+ +P QHG + L +RF +AY TD Sbjct: 116 GT---HLYPGV--PLLSLHAIVPHRPLRIGD-IDILPFRVQHGAMPILAYRFDKLAYITD 169 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + E LQ ++ LII+AL+ +H SH + ++++ I K H+ + Sbjct: 170 MKTMDEEEYAYLQGVETLIINALRFTPVHHSHQLVDDAIRVARRIGAKRTYFVHVTHQIG 229 Query: 246 Y-DMVLKSTPSRVVPAFDG 263 + D P A+DG Sbjct: 230 FHDEANARLPHGFSFAYDG 248 >gi|189462600|ref|ZP_03011385.1| hypothetical protein BACCOP_03290 [Bacteroides coprocola DSM 17136] gi|189430761|gb|EDU99745.1| hypothetical protein BACCOP_03290 [Bacteroides coprocola DSM 17136] Length = 217 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/218 (34%), Positives = 107/218 (49%), Gaps = 11/218 (5%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D GPDF Q +R ID VL TH H DH+ G+D LR + R + VYA Sbjct: 2 EGVRILIDCGPDFREQCIRMNDFRPIDGVLITHEHYDHVGGLDDLRPFC--SFRDVPVYA 59 Query: 111 APDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L YCF + YP P + VIE + +E +P H Sbjct: 60 EGYTAERLQRRMPYCFV---EHPYPGVPSIPLSVIEPYKPFQVTNLSRHSLEVVPFRVMH 116 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 G++ LG+R G VA+ TD+ P ES E LQ LD+L I+AL+ H +H SL+E+L++ Sbjct: 117 GKLPILGYRVGKVAWITDMLTMPDESYEFLQGLDYLFINALRIEPHWTHQSLAEALEQAS 176 Query: 229 LINPKNAILTHM--HVDLDYDMVLKSTPSRVVPAFDGM 264 I HM H+ L + V K P V A+DG+ Sbjct: 177 RIGAGETYFIHMSHHMGLHAE-VEKQLPPHVHMAYDGL 213 >gi|329961130|ref|ZP_08299385.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328532068|gb|EGF58878.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 215 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 108/218 (49%), Gaps = 15/218 (6%) Query: 53 NTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D GPDF Q+LR ID VL TH H DH G+D LR + + P VY+ Sbjct: 5 DAVILIDCGPDFREQMLRMSSFEKIDGVLITHEHYDHAGGLDDLRPFCRFGEIP--VYSD 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGR 170 HL YCF D+ YP + + E P + E +P+ HGR Sbjct: 63 AYTAGHLRARMPYCFV---DKVYPGVPRIYLQEVEAGKPFYINRT----EILPLQVMHGR 115 Query: 171 ISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 + LG+R G + Y TD+ P ES E+L+ LD L+I+AL+ H++H S+SE+L E Sbjct: 116 LPILGYRIGGRLGYITDMLTMPEESYEQLKGLDVLVINALRLQPHATHQSISEALVAAER 175 Query: 230 INPKNAILTHM--HVDLDYDMVLKSTPSRVVPAFDGMQ 265 I K HM H L ++ K P + A+DG + Sbjct: 176 IGAKETYFIHMSHHAGLHVELS-KQLPPHIYLAYDGQE 212 >gi|238013670|gb|ACR37870.1| unknown [Zea mays] Length = 374 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 28/259 (10%) Query: 10 LGCGASLGVPRITG----------DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR++ A +P NP NRR +S+ + + G+ T ++VD Sbjct: 97 LGTGTSEGIPRVSCLTHPTKICPVCTKAAEPGNP-NRRRNTSILLRHATPSGT-TNIVVD 154 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y A Sbjct: 155 AGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIYVAERDY 214 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGR-I 171 + + + Y +D P ++ N + P + + +E IP+ HG+ Sbjct: 215 EVMKMTHYYL---IDTSVVIPGAAVSALQFNIIKEEPFMVHN----LEVIPLPVWHGQGY 267 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELI 230 SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ + S+HF L +L+++ I Sbjct: 268 RSLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEVRKI 327 Query: 231 NPKNAILTHMHVDLDYDMV 249 PK + T M +D++ V Sbjct: 328 KPKKTLFTGMMHLMDHEKV 346 >gi|242044492|ref|XP_002460117.1| hypothetical protein SORBIDRAFT_02g023000 [Sorghum bicolor] gi|241923494|gb|EER96638.1| hypothetical protein SORBIDRAFT_02g023000 [Sorghum bicolor] Length = 376 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 83/258 (32%), Positives = 129/258 (50%), Gaps = 26/258 (10%) Query: 10 LGCGASLGVPRI------TGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR+ T C +P NP NRR +S+ + + G+ T ++VD Sbjct: 99 LGTGTSEGIPRVSCLTHPTKTCPVCSKAAEPGNP-NRRRNTSILLRHATPSGT-TNIVVD 156 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y A Sbjct: 157 AGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIYVA---- 212 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHGR-IS 172 + +E + L D + ++ + I + V +E IP+ HG+ Sbjct: 213 ERDYEVMKMTHYYLIDTSV--VIPGAAVSALQFNIIKEEPFMVHNLEVIPLPVWHGQGYR 270 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-HFSLSESLKKIELIN 231 SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ SS HF L +L+++ I Sbjct: 271 SLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEVRKIK 330 Query: 232 PKNAILTHMHVDLDYDMV 249 PK + T M +D++ V Sbjct: 331 PKKTLFTGMMHLMDHEKV 348 >gi|224535484|ref|ZP_03676023.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] gi|224522898|gb|EEF92003.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] Length = 215 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 109/223 (48%), Gaps = 21/223 (9%) Query: 53 NTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D GPDF Q+LR ID VL TH H DH+ G+D LR + + PI Y+ Sbjct: 5 DAVILIDCGPDFREQMLRVASFEKIDGVLITHEHYDHVGGLDDLRPFCRFGEIPI--YSD 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 HL YCF + YP + + +V E IP HGR+ Sbjct: 63 DYTATHLRARMPYCFL---EHKYPGVPQIFL---QEVEPGKNFFINHTEIIPFQVMHGRL 116 Query: 172 SSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 LG+R G +AY TD+ P ES E+LQ+LD L+++AL+ H +H S+SE+L+ + I Sbjct: 117 PILGYRIGKRLAYITDMLTMPEESYEQLQDLDVLVVNALRVKPHPTHQSISEALETAKRI 176 Query: 231 NPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 + HM HV+L+ K P V FDGM+ Sbjct: 177 GARETYFIHMSHHAGLHVELE-----KQLPPDVHLTFDGMEIE 214 >gi|326516560|dbj|BAJ92435.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 370 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 30/260 (11%) Query: 10 LGCGASLGVPRITG----------DWGACDPTNPKNRRTRSSLKISRVS-ERGSNTTVIV 58 LG G S GVPR++ A +P N +NRR +S+ + V+ R SN +++ Sbjct: 93 LGTGTSEGVPRVSCLTHPSKTCPVCTKAAEPGN-RNRRRNTSILLRHVTPSRTSN--ILI 149 Query: 59 DTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D G FY L+ + IDAV+ TH HAD I G+D LR + + I +Y AP Sbjct: 150 DAGKFFYHSALQWFPAFGLREIDAVIITHSHADAIGGLDCLRDWTNNVQPSIPIYVAPRD 209 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGR- 170 + + + Y +D T P ++ N + P ++ +E IP+ HG+ Sbjct: 210 YEVMKMTHHYL---VDTSTVIPGAAVSTLQFNIINEEPFTVQD----LEVIPLPVWHGQG 262 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIEL 229 SLGFRFG++ Y +DV+ P E+ + L++ LI+DAL+ + S+HF L +L+++ Sbjct: 263 YRSLGFRFGDICYISDVSDIPDETYKLLEDCQLLILDALRPDRSSSTHFGLPRALEEVRK 322 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 323 IKPKRTLFTGMMHLMDHEKV 342 >gi|15618390|ref|NP_224675.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|15836010|ref|NP_300534.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|16752563|ref|NP_444825.1| metal-dependent hydrolase, putative [Chlamydophila pneumoniae AR39] gi|33241831|ref|NP_876772.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|4376764|gb|AAD18619.1| Metal Dependent Hydrolase [Chlamydophila pneumoniae CWL029] gi|8163401|gb|AAF73652.1| metal-dependent hydrolase, putative [Chlamydophila pneumoniae AR39] gi|8978849|dbj|BAA98685.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|33236340|gb|AAP98429.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] Length = 270 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/266 (29%), Positives = 119/266 (44%), Gaps = 20/266 (7%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G G+P C N R RSS+ I N T+++D GPDF Sbjct: 13 LVFLGTGNPEGIPVPFCSCRVCQ--NTGIHRLRSSVLIQY-----QNKTLVIDAGPDFRT 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +D V THPH DHI GID LR +++ +R + + + + L ++ Y F Sbjct: 66 QMLVAGVSELDGVFLTHPHYDHIGGIDDLRAWYIVTQRSLPLVLSASTYRFLNKAKEYLF 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P V I N D C + I + GFRFGN+AY TD Sbjct: 126 ATPNVESSLPAVLEFTILNED---CGQEEFQGIPYTYVSYYQKSCHVTGFRFGNLAYLTD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPKNAILTH 239 + ++ A+ L N++ LI+ A + G SSH ++ E+ KN I+TH Sbjct: 183 LCSYDAKIFSYLDNVETLILSAGPSETPIPFQGHKSSHLTVEEAKAFANHAGIKNLIITH 242 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQ 265 + L+ + + V A+DGM+ Sbjct: 243 ISHCLEAE---RDQHPEVTFAYDGME 265 >gi|226505330|ref|NP_001143802.1| hypothetical protein LOC100276574 [Zea mays] gi|195627382|gb|ACG35521.1| hypothetical protein [Zea mays] Length = 374 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 28/259 (10%) Query: 10 LGCGASLGVPRITG----------DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR++ A +P NP NRR +S+ + + G+ T ++VD Sbjct: 97 LGTGTSEGIPRVSCLTHPTKICPVCTKAAEPGNP-NRRRNTSILLRHATPSGT-TNIVVD 154 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y A Sbjct: 155 AGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIYVAERDY 214 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGR-I 171 + + + Y +D P ++ N + P + + +E IP+ HG+ Sbjct: 215 EVMKMTHYYL---VDTSVVIPGAAVSALQFNIIKEEPFMVHN----LEVIPLPVWHGQGY 267 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELI 230 SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ + S+HF L +L+++ I Sbjct: 268 RSLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEVRKI 327 Query: 231 NPKNAILTHMHVDLDYDMV 249 P + T M +D++ V Sbjct: 328 KPTKTLFTGMMHLMDHEKV 346 >gi|255644437|gb|ACU22723.1| unknown [Glycine max] Length = 342 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 27/266 (10%) Query: 3 DYYHFTILGCGASLGVPRI---TGDWGACD-------PTNPKNRRTRSSLKISRVSERGS 52 D LG G S GVPR+ T C+ P N KNRR +S+ I + G+ Sbjct: 57 DQTELIFLGTGTSEGVPRVSCLTNPLLKCEVCSKAARPGN-KNRRLNTSILIRHPNSSGT 115 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G FY L + +IDAV+ TH HAD I G+D LR + + I + Sbjct: 116 HNNILIDAGKFFYHSALHWFPAFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPI 175 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPIL 165 Y A + + ++ Y +D P ++ N + P + ++ P+ Sbjct: 176 YVAKRDFEVMTKTHYYL---VDTSVILPGAKVSELQFNIISEEPFFVHE----LKFTPLP 228 Query: 166 QQHGR-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSES 223 HG+ SLGFRFGN+ Y +DV+ P E+ L++ + LI+DAL+ + S+HF L + Sbjct: 229 VWHGQNYRSLGFRFGNICYISDVSDIPEETYPLLKDCEILILDALRPDRSTSTHFGLQRA 288 Query: 224 LKKIELINPKNAILTHMHVDLDYDMV 249 L+++ I PK + T M +D++ V Sbjct: 289 LEEVRKIQPKRTLFTGMMHLMDHEEV 314 >gi|29840031|ref|NP_829137.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] gi|29834378|gb|AAP05015.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] Length = 277 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 36/274 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G G+P C T + RR RSS+ I+ + ++D GPDF Q+ Sbjct: 22 FLGSGNPEGIPAAFCSCAIC--TGKQIRRLRSSVLIAWAGK-----NFLIDAGPDFRQQM 74 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +D V THPH DHI GID LR +++ +R + V + K+L ++ + Sbjct: 75 LENHIQQLDGVFLTHPHYDHIGGIDDLRAWYVMHQRSLPVVVSAFTYKYLSKTREHIVFP 134 Query: 129 LDDRTYPP------IVNPIVIENN--DVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 T P I+N E+ D+P + Q+ + +G+RFGN Sbjct: 135 QSSATALPASLNFTILNEAYGESTFLDLPYTY---------VTYYQKSCEV--MGYRFGN 183 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPK 233 +AY TD+N + E L ++ LI+ A N G +HF+LS++ + K Sbjct: 184 LAYLTDMNRYDHEIFSYLSGVETLILSASPNQPPPAFHGYGHAHFTLSQAEDFASHVGAK 243 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 I+TH+ +L ++ + S V A+DGM+ S Sbjct: 244 KLIITHISHNLQKEL---ADYSDKVCAYDGMEVS 274 >gi|332177456|gb|AEE13146.1| Octanoyltransferase [Porphyromonas asaccharolytica DSM 20707] Length = 523 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 16/259 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + VS G +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSTLV--VSPSGKR--ILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + PI YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTELPI--YAEPNVLEAIKSRLHYYFGP 128 Query: 129 LDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P + ++PI ++ P + IE PI HG+ LG+R GN + TD+ Sbjct: 129 HRYPGTPHLTLHPI---SSLEPFTLYDL--TIE--PIRVMHGKQPILGYRIGNFGFLTDL 181 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLD 245 + E LEKL+ ++ L ++ L+ H +H ++ E+++ + P+ + + H+ H Sbjct: 182 KSIAPEELEKLRGVELLFVNGLRYTKPHPTHQTIEEAIELTARVQPQRSYIIHLSHHAPP 241 Query: 246 YDMVLKSTPSRVVPAFDGM 264 + + P V +DG+ Sbjct: 242 TAELQERLPKWVYVGYDGL 260 >gi|302775094|ref|XP_002970963.1| hypothetical protein SELMODRAFT_95258 [Selaginella moellendorffii] gi|300160945|gb|EFJ27561.1| hypothetical protein SELMODRAFT_95258 [Selaginella moellendorffii] Length = 283 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 41/269 (15%) Query: 10 LGCGASLGVPRI---TGDWGACD------PTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 LG G S GVPR+ T + C KNRR +S+ + G+ ++VD Sbjct: 5 LGTGTSEGVPRVSCLTNRYKRCPVCFAALQVGNKNRRRNTSIIVRYPRRDGTRMNILVDA 64 Query: 61 GPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 G FY L+ + +DAV+ TH HAD I G+D LR + + I +Y A ++ Sbjct: 65 GKFFYHSALQWFPYYGLRHLDAVIITHSHADAIGGLDDLRDWTNNIQDSIPIYVAQRDLE 124 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQHGRIS--- 172 + ++ Y +++P VI E V K VI+ P + +++ Sbjct: 125 VMRKTHYY------------LLDPTVITEGTQVS---KLQFKVIDEQPFFVEDVKVTPLP 169 Query: 173 --------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSES 223 SLGFR ++ Y +DV+ P E+ LQN D L++DAL+ + ++HFSL ++ Sbjct: 170 VWHGPGYRSLGFRIADMCYISDVSEIPEETYALLQNCDLLVVDALRPDRPSTTHFSLDQA 229 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKS 252 L ++ ++PK + T M +D+D V K Sbjct: 230 LDAVKRVHPKRTLFTGMMHTMDHDKVNKQ 258 >gi|313886573|ref|ZP_07820287.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923983|gb|EFR34778.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] Length = 523 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 16/259 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + VS G +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSTLV--VSPSGKR--ILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + PI YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTELPI--YAEPNVLEAIKSRLHYYFGP 128 Query: 129 LDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P + ++PI ++ P + IE PI HG+ LG+R G+ + TD+ Sbjct: 129 HRYPGTPHLTLHPI---SSLEPFTLYDL--TIE--PIRVMHGKQPILGYRIGSFGFLTDL 181 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM-HVDLD 245 + E LEKLQ ++ L ++ L+ H +H ++ E+++ + P+ + + H+ H Sbjct: 182 KSIAPEELEKLQGVELLFVNGLRYTKPHPTHQTIEEAIELTARVQPQRSYIIHLSHHAPP 241 Query: 246 YDMVLKSTPSRVVPAFDGM 264 + + P V +DG+ Sbjct: 242 TAELQERLPKGVYVGYDGL 260 >gi|302757403|ref|XP_002962125.1| hypothetical protein SELMODRAFT_76733 [Selaginella moellendorffii] gi|300170784|gb|EFJ37385.1| hypothetical protein SELMODRAFT_76733 [Selaginella moellendorffii] Length = 283 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 41/269 (15%) Query: 10 LGCGASLGVPRI---TGDWGACD------PTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 LG G S GVPR+ T + C KNRR +S+ + G+ ++VD Sbjct: 5 LGTGTSEGVPRVSCLTNRYKRCPVCFAALQVGNKNRRRNTSIIVRYPRRDGTRMNILVDA 64 Query: 61 GPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 G FY L+ + +DAV+ TH HAD I G+D LR + + I +Y A ++ Sbjct: 65 GKFFYHSALQWFPYYGLRHLDAVIITHSHADAIGGLDDLRDWTNNIQDSIPIYVAQRDLE 124 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQHGRIS--- 172 + ++ Y +++P VI E V K VI+ P + +++ Sbjct: 125 VMGKTHYY------------LLDPTVITEGTQVS---KLQFKVIDEQPFFVEDVKVTPLP 169 Query: 173 --------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSES 223 SLGFR ++ Y +DV+ P E+ LQN D L++DAL+ + ++HFSL ++ Sbjct: 170 VWHGPGYRSLGFRIADMCYISDVSEIPEETYALLQNCDLLVVDALRPDRPSTTHFSLDQA 229 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKS 252 L ++ ++PK + T M +D+D V K Sbjct: 230 LDAVKRVHPKRTLFTGMMHTMDHDKVNKQ 258 >gi|189467076|ref|ZP_03015861.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] gi|189435340|gb|EDV04325.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] Length = 215 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 75/228 (32%), Positives = 108/228 (47%), Gaps = 31/228 (13%) Query: 53 NTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D GPDF Q+L ID VL TH H DH+ G+D LR + + PI Y+ Sbjct: 5 DAVILIDCGPDFREQMLHAASFEKIDGVLITHEHYDHVGGLDDLRPFCRFGEIPI--YSD 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----EAIPILQ 166 HL YCF + YP + + E AG E P+ Sbjct: 63 EYTATHLRARMPYCFL---EHKYPGVPQIFLQE--------VEAGKTFFINNTEITPLQV 111 Query: 167 QHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 HGR+ LG+R G +AY TD+ P ES E+L +LD L+++AL+ H +H S+SE+L+ Sbjct: 112 MHGRLPILGYRIGKRMAYITDMLTMPEESYEQLHDLDVLVVNALRVKPHPTHQSISEALE 171 Query: 226 KIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 + I + HM HV+L+ K P V FDGM+ Sbjct: 172 TAKRIGARETYFIHMSHHAGLHVELE-----KQLPPDVHLTFDGMEIE 214 >gi|269303356|gb|ACZ33456.1| metallo-beta-lactamase family protein [Chlamydophila pneumoniae LPCoLN] Length = 270 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 22/267 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G G+P C N R RSS+ I N T+++D GPDF Sbjct: 13 LVFLGTGNPEGIPVPFCSCRVCQ--NTGIHRLRSSVLIQY-----QNKTLVIDAGPDFRT 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +D V THPH DHI GID LR +++ +R + + + + L ++ Y F Sbjct: 66 QMLVAGVSELDGVFLTHPHYDHIGGIDDLRAWYIVTQRSLPLVLSASTYRFLNKAKEYLF 125 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFGNVAYCT 185 + + P V I N D + G+ + Q+ ++ GFRFGN+AY T Sbjct: 126 ATPNVESSLPAVLEFTILNEDYG--QEEFQGIPYTYVSYYQKSCHVT--GFRFGNLAYLT 181 Query: 186 DVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILT 238 D+ ++ A+ L N++ LI+ A G SSH ++ E+ KN I+T Sbjct: 182 DLCSYDAKIFSYLDNVETLILSAGPSETPIAFQGHKSSHLTVEEAKAFANHAGIKNLIIT 241 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 H+ L+ + + V A+DGM+ Sbjct: 242 HISHCLEAE---RDQHLEVTFAYDGME 265 >gi|48716734|dbj|BAD23415.1| hydrolase-like protein [Oryza sativa Japonica Group] gi|50726197|dbj|BAD33716.1| hydrolase-like protein [Oryza sativa Japonica Group] Length = 311 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 30/260 (11%) Query: 10 LGCGASLGVPRI----------TGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR+ T A +P N +NRR +S+ + + G+ +++D Sbjct: 34 LGTGTSEGIPRVSCLTNPSKTCTVCTKAAEPGN-RNRRRNTSILLRHATPSGT-ANILID 91 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY L+ + +IDAV+ TH HAD I G+D LR + + I +Y A Sbjct: 92 AGKFFYHSALQWFPAYGLRTIDAVIITHSHADAIGGLDCLRDWTNNVQPTIPIYVA---- 147 Query: 116 KHLFESFRYC-FKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGR- 170 + +E + + +D P ++ N + P + + +E IP+ HG+ Sbjct: 148 ERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFTVHN----LEVIPLPVWHGQG 203 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIEL 229 SLGFRFG V Y +DV+ P E+ + L++ + LI+DAL+ + S+HF L +L+++ Sbjct: 204 YRSLGFRFGRVCYISDVSDIPKETYKLLEDCELLIMDALRPDRSSSTHFGLPRALEEVRK 263 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 264 IKPKKTLFTGMMHLMDHEKV 283 >gi|297829934|ref|XP_002882849.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328689|gb|EFH59108.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] Length = 359 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +G G S G+PR+ T C +P N KNRR +S+ + + G+ + +++D Sbjct: 81 MGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGN-KNRRLNTSILVRYIRPSGT-SNILID 138 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y A M Sbjct: 139 CGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTA---M 195 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIE----NNDVPICMKSAGGVIEAIPILQQHG-R 170 + L + + +D P +E + D P + ++ P+ HG Sbjct: 196 RDLEVMKKTHYYLVDTSVIIPGAAVSELEFKIIHEDQPFVVND----LKITPLPVWHGSN 251 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIEL 229 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ + ++HF L +L+++ Sbjct: 252 YRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRK 311 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 312 IKPKRTLFTGMMHLMDHEKV 331 >gi|228471110|ref|ZP_04055934.1| octanoyltransferase [Porphyromonas uenonis 60-3] gi|228307118|gb|EEK16179.1| octanoyltransferase [Porphyromonas uenonis 60-3] Length = 517 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 129/260 (49%), Gaps = 18/260 (6%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + S R +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSALMVSPSGR----RILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + PI YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTELPI--YAEPNVLESIKARLHYYFGP 128 Query: 129 LDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P + ++PI ++ P + IE PI HG+ LG+R G+ + TD+ Sbjct: 129 HRYPGTPHLTLHPI---SSLEPFTLYDL--TIE--PIRVMHGKQPILGYRIGSFGFLTDL 181 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM--HVDL 244 + E +EKL+ ++ L ++ L+ H +H ++ E+L+ + P+ + + H+ H Sbjct: 182 KSIAPEEIEKLRGVELLFVNGLRYTKPHPTHQTIEEALELTAKVQPQRSYIIHLSHHAPP 241 Query: 245 DYDMVLKSTPSRVVPAFDGM 264 ++ ++ P V +DG+ Sbjct: 242 TAELQVR-LPEGVYVGYDGL 260 >gi|95928892|ref|ZP_01311638.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95135237|gb|EAT16890.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 273 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 84/274 (30%), Positives = 120/274 (43%), Gaps = 30/274 (10%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 F ILG GA GVP D C +R RTRS + R N ++DT PD Sbjct: 5 FKILGSGAGPGVPSFFCDCSGCREARANSRYCRTRSGALL-----RSGNANYLIDTSPDL 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 Q++RE + ID + TH H DH G+ + Y L +K PI +Y P + +SF Sbjct: 60 RAQLVRENLEGIDGIFLTHWHFDHFGGLGEMEYYVKLDRKEPIPLYLPPSAV----DSFH 115 Query: 124 YCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 F L D P P + DV I A IE L + +S L A Sbjct: 116 AAFPYLHDVLVPQPWEFGKTYKRGDVGITALPANHGIETAGFLIE-SDVSRL-------A 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y D + P + +++ +D LI DA N SH S++E+++ + I KN +LTH Sbjct: 168 YFPDTSGLPDVTKRQVEAIDCLICDATFSDSNWFPDSHMSIAEAIELGKSIGAKNTVLTH 227 Query: 240 MHVDLDYDMVLKSTPSR------VVPAFDGMQFS 267 + + + ++ R V A DGMQF+ Sbjct: 228 LAIHYGNPVTVEELNGRLSDLPNVFLAHDGMQFN 261 >gi|168050596|ref|XP_001777744.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670845|gb|EDQ57406.1| predicted protein [Physcomitrella patens subsp. patens] Length = 385 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 36/284 (12%) Query: 10 LGCGASLGVPRITGDWGACDPTNP---------------KNRRTRSSLKISRVSERGSNT 54 LG G S G+PR++ C TNP KNRR +SL + ++ GS Sbjct: 107 LGTGTSEGIPRVS-----C-LTNPDKSCPVCLAAAQLGNKNRRRNTSLLVRYLAPDGSLY 160 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G FY L+ + ID+V+ TH HAD G+D LR + + I +Y Sbjct: 161 NILIDAGKFFYHSALQWFPYYGIRKIDSVIITHAHADANGGLDDLRDWTNNVQPHIPIYV 220 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +S Y + I ++ P + G + +P+ G Sbjct: 221 GLRDLTVMAKSHYYLVDTTVIMKGTAVTKLQFIPMSEEPF--QVHGLKVTPLPVWHGPG- 277 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIEL 229 SLGFR G+V Y +D + PAE+ L+N D LI+DAL+ + S+HF + +L+++ Sbjct: 278 YRSLGFRIGDVCYISDASEIPAETYPLLENCDLLILDALRPDRSSSTHFGMPAALEEVRK 337 Query: 230 INPKNAILTHMHVDLDYDMV-------LKSTPSRVVPAFDGMQF 266 I PK + T M +D+ + L+S V +FDGM+ Sbjct: 338 IRPKRTLFTGMMHTMDHHKINTFLAKLLESEGLDVQLSFDGMKL 381 >gi|225164195|ref|ZP_03726471.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] gi|224801204|gb|EEG19524.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] Length = 260 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 19/264 (7%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P I + C T+P+N RTRSS+ + R + +D P+F +Q + Sbjct: 6 LGTGTSHGIPMIACECPVCTSTDPRNHRTRSSVHVIMDGLR-----IQIDAAPEFRLQCV 60 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 RE++ ID + TH HADHI G+D LR + ++ + VY+ + + + + Y A Sbjct: 61 REKITDIDLFILTHGHADHIVGMDDLRRFCDRREGTALPVYSTDEGLSRVLAIYPY---A 117 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VA 182 + +R P + +P + G I + L HG +++LG F Sbjct: 118 IIER--PVTQGYAAFQLTVMPPVLTFPQGTISS--TLLPHGGVNTLGLVFEERSTGCKFT 173 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD PA ++ D +++D L+ H +H +++E+L+ I LTHM Sbjct: 174 YYTDCKRVPAAAVALAAGSDAVVLDGLRPQEHPTHMNITEALEAARAIAAPQTYLTHMAH 233 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQF 266 +D+ V + P + A DG++ Sbjct: 234 TVDHPTVSATLPPGIALAHDGLRL 257 >gi|145332379|ref|NP_001078146.1| metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 279 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +G G S G+PR+ T C +P N +NRR +S+ + + G+ + +++D Sbjct: 1 MGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGN-RNRRLNTSILVRYIRPSGT-SNILID 58 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y A + Sbjct: 59 CGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTAIRDL 118 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIE----NNDVPICMKSAGGVIEAIPILQQHG-R 170 + + ++ Y +D P +E + D P + ++ P+ HG Sbjct: 119 EVMKKTHYYL---VDTSVIIPGAAVSELEFKVIHEDQPFVVND----LKITPLPVWHGSN 171 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIEL 229 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ S +HF L +L+++ Sbjct: 172 YRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRK 231 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 232 IKPKRTLFTGMMHLMDHEKV 251 >gi|9294602|dbj|BAB02903.1| hydrolase-like protein [Arabidopsis thaliana] Length = 309 Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 29/260 (11%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +G G S G+PR+ T C +P N +NRR +S+ + + G+ + +++D Sbjct: 31 MGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGN-RNRRLNTSILVRYIRPSGT-SNILID 88 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y A + Sbjct: 89 CGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTAIRDL 148 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIE----NNDVPICMKSAGGVIEAIPILQQHG-R 170 + + ++ Y +D P +E + D P + ++ P+ HG Sbjct: 149 EVMKKTHYY---LVDTSVIIPGAAVSELEFKVIHEDQPFVVND----LKITPLPVWHGSN 201 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIEL 229 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ S +HF L +L+++ Sbjct: 202 YRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRK 261 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 262 IKPKRTLFTGMMHLMDHEKV 281 >gi|42564134|ref|NP_187996.2| metallo-beta-lactamase family protein [Arabidopsis thaliana] gi|62318851|dbj|BAD93913.1| hydrolase like protein [Arabidopsis thaliana] gi|63003856|gb|AAY25457.1| At3g13800 [Arabidopsis thaliana] gi|90093300|gb|ABD85163.1| At3g13800 [Arabidopsis thaliana] gi|110739543|dbj|BAF01680.1| hydrolase like protein [Arabidopsis thaliana] Length = 361 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 78/260 (30%), Positives = 130/260 (50%), Gaps = 29/260 (11%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +G G S G+PR+ T C +P N +NRR +S+ + + G+ + +++D Sbjct: 83 MGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGN-RNRRLNTSILVRYIRPSGT-SNILID 140 Query: 60 TGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y A + Sbjct: 141 CGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTAIRDL 200 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIE----NNDVPICMKSAGGVIEAIPILQQHG-R 170 + + ++ Y +D P +E + D P + ++ P+ HG Sbjct: 201 EVMKKTHYYL---VDTSVIIPGAAVSELEFKVIHEDQPFVVND----LKITPLPVWHGSN 253 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIEL 229 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ + ++HF L +L+++ Sbjct: 254 YRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRK 313 Query: 230 INPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 314 IKPKRTLFTGMMHLMDHEKV 333 >gi|89898551|ref|YP_515661.1| beta-lactamase superfamily metal dependent hydrolase [Chlamydophila felis Fe/C-56] gi|89331923|dbj|BAE81516.1| metal dependent hydrolase of the beta-lactamase superfamily I [Chlamydophila felis Fe/C-56] Length = 271 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 28/272 (10%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G G+P C T + +R R S+ + ++ ++D GPDF Sbjct: 14 LTFLGSGNPEGIPVAFCSCAVC--TGKQIQRLRPSVLVEWAEKK-----FLIDVGPDFRQ 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + +D V THPH DHI GID LR +++ +R + V + +++Y Sbjct: 67 QMLENNIQKLDGVFLTHPHYDHIGGIDDLRVWYVLHQRSLPVVLSA-------FTYKYLC 119 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIP---ILQQHGRISSLGFRFGNVA 182 K+ + +P + + + D I + G +P + +G+RFGN+A Sbjct: 120 KSREHIVFPQGGDSSLSASLDFTILNEEYGESTFLDLPYTYVSYYQKSCEVMGYRFGNLA 179 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPKNA 235 Y TD+N + E L ++ LI+ A N G +HF++S++ + K Sbjct: 180 YLTDMNRYDQEIFSYLSGVETLILSASPNQPPAAFSGRGYAHFTMSQAEDFASYVGAKKL 239 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 I+TH+ +L ++ + S + A+DGM+ S Sbjct: 240 IITHISHNLQKEL---ADYSDKLCAYDGMEVS 268 >gi|330444281|ref|YP_004377267.1| metal dependent hydrolase [Chlamydophila pecorum E58] gi|328807391|gb|AEB41564.1| metal dependent hydrolase [Chlamydophila pecorum E58] Length = 263 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 27/266 (10%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G G+P C + K +R R S+ I +G N ++D GPDF Q+ Sbjct: 11 FLGTGNPEGIPVPFCSCPVC--SGGKVQRLRPSVLIEY---QGKN--YLIDVGPDFREQM 63 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR + + V +TH H DHI GID LR ++L +RP+ V + +++ S Y Sbjct: 64 LRYGIRELSGVFFTHEHYDHIGGIDDLRSWYLTFQRPLPVVMSGSTYRYIQSSKGYLLTP 123 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP-----ILQQHGRISSLGFRFGNVAY 183 + P V + N GV E +P Q+ ++ GF FGN+AY Sbjct: 124 QNAEASLPAVLDFRLLNEPY------GEGVFEGLPYRYVSYFQRSCGVT--GFCFGNLAY 175 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSLSESLKKIELINPKNAILTH 239 TD++ + + L+++D LI+ + G SSH +LSE+ E + +N I TH Sbjct: 176 LTDISRYERKIFGYLEHIDTLILSVSASSGFMGRASSHLTLSEAESFAEHLGVQNVIFTH 235 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQ 265 + ++ +++ P R A+DGM+ Sbjct: 236 IGHVVEQEIL--QYPGRTF-AYDGME 258 >gi|218202019|gb|EEC84446.1| hypothetical protein OsI_31065 [Oryza sativa Indica Group] gi|222641433|gb|EEE69565.1| hypothetical protein OsJ_29077 [Oryza sativa Japonica Group] Length = 365 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 32/262 (12%) Query: 2 KDYYHFTILGCGASLGVPRI----------TGDWGACDPTNPKNRRTRSSLKISRVSERG 51 + LG G S G+PR+ T A +P N +NRR +S+ + + G Sbjct: 94 RQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVCTKAAEPGN-RNRRRNTSILLRHATPSG 152 Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D G ++ +IDAV+ TH HAD I G+D LR + + I +Y A Sbjct: 153 T-ANILIDAG----------KLRTIDAVIITHSHADAIGGLDCLRDWTNNVQPTIPIYVA 201 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHG 169 + +E + L D + ++ + I + V +E IP+ HG Sbjct: 202 ----ERDYEVMKMTHYYLIDTSV--VIPGAAVSALQFNIIKEEPFTVHNLEVIPLPVWHG 255 Query: 170 R-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-HFSLSESLKKI 227 + SLGFRFG V Y +DV+ P E+ + L++ + LI+DAL+ SS HF L +L+++ Sbjct: 256 QGYRSLGFRFGRVCYISDVSDIPKETYKLLEDCELLIMDALRPDRSSSTHFGLPRALEEV 315 Query: 228 ELINPKNAILTHMHVDLDYDMV 249 I PK + T M +D++ V Sbjct: 316 RKIKPKKTLFTGMMHLMDHEKV 337 >gi|224135033|ref|XP_002327550.1| predicted protein [Populus trichocarpa] gi|222836104|gb|EEE74525.1| predicted protein [Populus trichocarpa] Length = 314 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 26/259 (10%) Query: 9 ILGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 +G G S G+PR+ T C +P N KNRR + L I G +++ Sbjct: 36 FMGTGTSEGIPRLSCLTNPSNKCPVCSKAVEPGN-KNRRLNTGLLICYHGPSGRRN-ILI 93 Query: 59 DTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D G FY LR + +IDAV+ TH HAD I G+D LR + + I +Y A Sbjct: 94 DVGKFFYHSALRWFPAFGLRTIDAVIITHSHADAIGGLDDLRDWTNNVQPYIPIYVAERD 153 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGRI 171 + + ++ Y +D P ++ N + P + +P+ HG Sbjct: 154 FEVMKKTHYYL---VDTSVVTPGAAVSELQFNLIHEEPFVVNDLK--FTPLPVWHGHG-Y 207 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELI 230 SLGFRFGN+ Y +DV+ P E+ L++ + LI+DAL+ + S+HF L +++++ I Sbjct: 208 RSLGFRFGNICYISDVSEIPEETYPLLKDCELLIMDALRPDRSSSTHFGLPRAIEEVRKI 267 Query: 231 NPKNAILTHMHVDLDYDMV 249 P+ + T M +D+D V Sbjct: 268 QPRRTLFTGMMHLMDHDNV 286 >gi|281420290|ref|ZP_06251289.1| lipoate-protein ligase B [Prevotella copri DSM 18205] gi|281405592|gb|EFB36272.1| lipoate-protein ligase B [Prevotella copri DSM 18205] Length = 221 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 11/218 (5%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 NT +++D GPD Q+LR ID VL TH H DH+ GID LR + + I++Y Sbjct: 5 ENTRILIDAGPDIRQQLLRVPFRKIDGVLVTHIHYDHVGGIDDLRPFCIFGD--INIYGD 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L + YCF ++ YP P + I ++ G IE +PI H Sbjct: 63 EIVTAGLPHTMPYCFPKNAEKLYPGAPKLKLHTIHPHE-----HYQIGDIEFVPIRVMHD 117 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIE 228 ++ LG+RFG AY TD+ + E L+ ++ L+I+AL+ H SH +S++++ Sbjct: 118 KMPILGYRFGKFAYITDMKSMGDEEYAYLEGVEMLVINALRFEKTHHSHQLVSDAIEVSR 177 Query: 229 LINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQ 265 I K+ H+ + + D K P FDGM+ Sbjct: 178 RIGAKHTYFIHVTHQIGFHDEANKRLPEGFEFGFDGME 215 >gi|91775849|ref|YP_545605.1| putative hydrolase protein [Methylobacillus flagellatus KT] gi|91709836|gb|ABE49764.1| putative hydrolase protein [Methylobacillus flagellatus KT] Length = 100 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 4/100 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G+S G P I C NPKN+R+R S I+ G N +++DTGPD + Sbjct: 3 LTMLGVGSSAGTPVIGCQCATCVSDNPKNKRSRCSSLITL--SNGKN--ILIDTGPDIRL 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 Q LRE + IDAVLYTH HADH+HGID LR + KQ++ I Sbjct: 59 QALREGISHIDAVLYTHTHADHLHGIDDLRAFCQKQRQQI 98 >gi|329942585|ref|ZP_08291395.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|313847809|emb|CBY16800.1| putative metal-dependent hydrolase [Chlamydophila psittaci RD1] gi|325507035|gb|ADZ18673.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|328815495|gb|EGF85483.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|328914463|gb|AEB55296.1| lipoate-protein ligase B [Chlamydophila psittaci 6BC] Length = 273 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 30/273 (10%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G G+P + C+ K+ RR RSS+ I + +++D GPDF Sbjct: 14 LTFLGSGNPEGIPVA---FCPCEMCKGKHIRRLRSSVLIEWAGKH-----ILIDVGPDFR 65 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + +D V THPH DHI G+D LR +++ ++ + V + +++Y Sbjct: 66 QQMLENNIEKLDGVFLTHPHYDHIGGMDDLRVWYVLHQQSLPVVLSS-------FTYKYL 118 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIP---ILQQHGRISSLGFRFGNV 181 KA + PP + + + I + G +P + +G+RFGN+ Sbjct: 119 CKAREHLVLPPDRDASLSAALNFTILNEDYGESTFLDLPFTYVTYHQKSCEVMGYRFGNL 178 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPKN 234 AY TD+N + + L +D LI+ GL +H ++S++ L+ K Sbjct: 179 AYLTDMNRYDHKIFSYLSGVDTLILSVSSTRPPQAFAGLGYAHLTMSQAEDFASLVGAKK 238 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 I TH+ L ++V P+++ A+DGM+ S Sbjct: 239 LIFTHISHHLQKELV--DYPNKLW-AYDGMEVS 268 >gi|219667918|ref|YP_002458353.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219538178|gb|ACL19917.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 261 Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 124/274 (45%), Gaps = 37/274 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT++G A LGVP + AC +P RTRS V E G +++D PD Sbjct: 5 FTLMGTTAGLGVPAFHCNCIACREARADPFWARTRSG----AVLETGKEN-ILIDASPDL 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 Q+LRE++ S+D + TH H DH GI L Y L++KRP+ ++ P Sbjct: 60 SKQLLRERIQSVDYLFVTHWHYDHFGGIGDLEYYVKLERKRPVALFLPP----------- 108 Query: 124 YCFKALDD--RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG 179 A+DD + YP + VIE + G + +P + G I G + Sbjct: 109 ---SAVDDFAKAYPFLEEVFVIEPWEFGKSYAFEGIELTVLPARHSIETGGILLAGAK-- 163 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH---SSHFSLSESLKKIELINPKNAI 236 AY TD + PA + +LQ +D LI DA NG + SH + E++ E I ++ + Sbjct: 164 RAAYFTDTSGLPAPTARQLQGVDTLICDATFNGANWFPHSHMNWQEAIALGESIRAQHTV 223 Query: 237 LTHMHVDLDYDMVLKSTP------SRVVPAFDGM 264 LTH+ + + ++V A+DGM Sbjct: 224 LTHLAMHYSTPITAAQLQEKLKDYAQVSLAYDGM 257 >gi|62184899|ref|YP_219684.1| putative hydrolase [Chlamydophila abortus S26/3] gi|62147966|emb|CAH63714.1| putative hydrolase [Chlamydophila abortus S26/3] Length = 273 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 28/272 (10%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G G+P C T + RR RSS+ I+ + ++D+GPDF Sbjct: 14 LTFLGSGNPEGIPVAFCSCAMC--TGRQIRRLRSSVLITWAGKH-----FLIDSGPDFRQ 66 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY-C 125 Q+L + +D V THPH DHI GID LR +++ ++ + V + K+L + ++ Sbjct: 67 QMLENHIEKLDGVFLTHPHYDHIGGIDDLRVWYVLHQQSLPVVLSASTYKYLCQYRKHIV 126 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP---ILQQHGRISSLGFRFGNVA 182 F D +++ ++ + +P + +G+RFGN+A Sbjct: 127 FPQGQDSALSAVLDFTILNE-------RYGESTFLGLPFTYVTYYQKSCEVMGYRFGNLA 179 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGL-------HSSHFSLSESLKKIELINPKNA 235 Y TD++ + E + L +D LI+ L +H ++S++ LI K Sbjct: 180 YLTDMSRYDHEIVSYLSGVDTLILSVTCQQLPKVFSRQGYAHLTISQAEDFAALIGVKKV 239 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 I TH++ L ++ + S + A+DGM+ S Sbjct: 240 IFTHINHSLQKEL---ANYSDKLWAYDGMEVS 268 >gi|261880363|ref|ZP_06006790.1| lipoate-protein ligase B [Prevotella bergensis DSM 17361] gi|270332907|gb|EFA43693.1| lipoate-protein ligase B [Prevotella bergensis DSM 17361] Length = 215 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 18/220 (8%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVY 109 T V++D GPD MQ++ + IDAVL TH H DH GID LR YF ID+Y Sbjct: 5 ETTRVLIDCGPDIRMQLMPLEFRKIDAVLLTHEHYDHAGGIDDLRPCCYFGN----IDIY 60 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +K + +F YCF + YP P + I ++ P+ + G I +PI Sbjct: 61 GNDMTVKAVKHNFPYCFT---EHLYPGVPKLTLHAIRKHE-PMRV----GDINILPIEVM 112 Query: 168 HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKK 226 HG++ LG+RFG++AY TD+ A + LQ ++ L+++AL+ H SH + E++ Sbjct: 113 HGKLPILGYRFGSMAYITDMKAISPDECVYLQGVETLVLNALRWAKPHHSHLIIPEAIDF 172 Query: 227 IELINPKNAILTHM-HVDLDYDMVLKSTPSRVVPAFDGMQ 265 I LTH+ H +++ P A+DG++ Sbjct: 173 SRRIGASRTFLTHLTHKIGLHEVANDRLPEGFQFAYDGLE 212 >gi|328769130|gb|EGF79174.1| hypothetical protein BATDEDRAFT_89854 [Batrachochytrium dendrobatidis JAM81] Length = 329 Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 20/255 (7%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPH 85 P KNRR +S + + G V++D G FY L ++ +IDAV+ TH H Sbjct: 62 PHFSKNRRRNTSGVVRFMHSDGRMRNVVIDCGKTFYDSALSWFVEYRLRNIDAVILTHGH 121 Query: 86 ADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHLFESFRYCF---KALDDRTYPPI 137 AD I G+D LR + + + ++ +D+Y + M+ + +F Y KA P + Sbjct: 122 ADAIFGLDELRQWTIGGEDRRLQKIVDIYLDQETMEVVARAFPYMVDSAKATGGGDVPSV 181 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-----ISSLGFRFGNVAYCTDVNAFPA 192 I+ +N D PI + IP +HG+ SLGFRF N+ Y +D NA P Sbjct: 182 RFNIIEKNADGPIPFL-IDNELTVIPFEVEHGKNGTKPFMSLGFRFENLTYISDANAIPP 240 Query: 193 ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK--IELINPKNAILTHMHVDLDYDMVL 250 + ++ LIIDAL H SHF +++ + + L T + +DYD + Sbjct: 241 RAGSIIKGSTHLIIDALNVEPHCSHFGFDQAIHECILALAKGGKGYFTGLSHSMDYDDLQ 300 Query: 251 KSTPSRVVPAFDGMQ 265 + S+ P G+ Sbjct: 301 EYIASKQSPKDAGIH 315 >gi|255572929|ref|XP_002527395.1| catalytic, putative [Ricinus communis] gi|223533205|gb|EEF34961.1| catalytic, putative [Ricinus communis] Length = 346 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 33/288 (11%) Query: 3 DYYHFTILGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGS 52 D +G G S G+PR+ T C +P N KNRR + L I G+ Sbjct: 62 DQSEIIFMGTGTSEGIPRVSCLTNPLKKCPVCSKAVEPGN-KNRRLNTGLLIRYAGPAGT 120 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G FY LR + +IDAV+ TH HAD I G+D LR + + I + Sbjct: 121 QN-ILIDAGKFFYHSALRWFPTFGLRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPI 179 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQ 166 Y A + FE + L D + I+ + I + V ++ P+ Sbjct: 180 YVA----ERDFEVMKKTHYYLVDTSV--IIPGAAVSELQFNIMHEEPFIVCDLKITPLPV 233 Query: 167 QHG-RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESL 224 HG SLGFRFG + Y +DV+ P E+ L++ + LI+DAL+ + S+HF L +L Sbjct: 234 WHGPGYRSLGFRFGKICYISDVSDIPEETYPLLKDCEILILDALRPDRSSSTHFGLPRAL 293 Query: 225 KKIELINPKNAILTHMHVDLDYDMV-------LKSTPSRVVPAFDGMQ 265 ++ I PK + T M +D++ V ++S V ++DG++ Sbjct: 294 DEVRKIQPKRTLFTGMMHLMDHEKVNEYLLKLMESEGLDVQLSYDGLR 341 >gi|160891926|ref|ZP_02072929.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] gi|156858404|gb|EDO51835.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] Length = 196 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 99/198 (50%), Gaps = 20/198 (10%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFRYCFKALDDR 132 ID VL TH H DH+ G+D LR + PI D Y A HL YCF D+ Sbjct: 9 KIDGVLVTHEHYDHVGGLDDLRPFGRFADIPIYSDAYTA----AHLRARMPYCFV---DK 61 Query: 133 TYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNA 189 YP P + +E V ++ E +P+ HGR+ LG+R G + Y TD++ Sbjct: 62 VYPGVPRIYLQEVEAGQVFHINRT-----EVLPLRVMHGRLPILGYRIGGRLGYITDMHM 116 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM--HVDLDYD 247 P ES E+L+ LD L+++AL+ H +H S+SE+L+ I K HM H L D Sbjct: 117 MPEESYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHHAGLHAD 176 Query: 248 MVLKSTPSRVVPAFDGMQ 265 + K P V A+DG++ Sbjct: 177 -IEKQLPPHVHFAYDGLE 193 >gi|123976869|ref|XP_001330638.1| lipoate-protein ligase [Trichomonas vaginalis G3] gi|121897250|gb|EAY02377.1| lipoate-protein ligase, putative [Trichomonas vaginalis G3] Length = 266 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 13/238 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ++G G+ G+P + D C + K++R R+S+ ++ N T+I+D G DF Q+ Sbjct: 6 LMGTGSEFGIPELGCDCPTCKSGDIKDKRERASIFLTT----SDNKTIIIDAGCDFRDQI 61 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + + A++ T HI GID +R + PI + + + L + + Y F Sbjct: 62 LRENLRQMSAIILTDDQYSHIMGIDEIRPFTKDSSIPI--FCSEKTKETLLKVYYYVFHV 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P + I+N+ G I PIL + S G+R G AY + Sbjct: 120 FQIGGGLPQMELKAIDND-----FTVEG--ITVTPILCSSPKRESYGYRLGTFAYLPECK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + ESL KL ++ L+I A H + E+++ I I K +TH+ D Y Sbjct: 173 SISDESLSKLHGVETLVIGASGLKSHEDKLCIDEAIEYIIKIGAKRNYITHITHDNTY 230 >gi|189423987|ref|YP_001951164.1| beta-lactamase [Geobacter lovleyi SZ] gi|189420246|gb|ACD94644.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 270 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 50/281 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F +LG GA G P D C +P RTRS ++ ++ V++DT PD Sbjct: 6 FILLGSGAGPGAPSFFCDCVGCREAREHPAAIRTRSGALLTTAGQQ-----VLIDTPPDL 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 Q+LRE+V +D + TH H DH GI L Y LK+ +PI +Y P E F Sbjct: 61 RQQLLRERVSDVDTLFITHWHYDHFGGIGELEYYVKLKRMQPITLYLPPSAR----ELFH 116 Query: 124 YCFKALDD----------RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 F AL++ R+YP + ++I +++AG ++ + + Sbjct: 117 NAFPALEEIFTVQTWEFFRSYP--LGELLITPLPARHSIETAGFMVSSPTV--------- 165 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 +AY D P E+L +Q D+LI DA +N +SH S++E+++ + Sbjct: 166 ------RLAYFPDTAGLPPETLPLVQGSDYLICDATFSGENWFPNSHMSIAEAIELGQQA 219 Query: 231 NPKNAILTHMHV-------DLDYDMVLKSTPSRVVPAFDGM 264 K ILTH+ V ++ L + P V A DGM Sbjct: 220 EAKTVILTHISVHYSRPLTSVELQQQLAAHP-HVRAAHDGM 259 >gi|89896275|ref|YP_519762.1| hypothetical protein DSY3529 [Desulfitobacterium hafniense Y51] gi|89335723|dbj|BAE85318.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 261 Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 112/244 (45%), Gaps = 31/244 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT++G A LGVP + AC +P RTRS V E G +++D PD Sbjct: 5 FTLMGTTAGLGVPAFHCNCIACREARADPFWARTRSG----AVLETGKEN-ILIDASPDL 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 Q+LRE++ S+D + TH H DH GI L Y L++K P+ ++ P Sbjct: 60 SKQLLRERIQSVDYLFVTHWHYDHFGGIGDLEYYVKLERKWPVALFLPP----------- 108 Query: 124 YCFKALDD--RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG 179 A+DD + YP + VIE + G + +P + G I G + Sbjct: 109 ---SAVDDFAKVYPFLEEVFVIEPWEFGKSYAFEGIELTVLPARHSIETGGILLAGSK-- 163 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS---SHFSLSESLKKIELINPKNAI 236 AY TD PA + +LQ +D LI DA NG + SH + E++ E I ++ + Sbjct: 164 RAAYFTDTAGLPAPTARQLQGVDTLICDATFNGANWFPHSHMNWQEAIALGESIRAQHTV 223 Query: 237 LTHM 240 LTH+ Sbjct: 224 LTHL 227 >gi|71020439|ref|XP_760450.1| hypothetical protein UM04303.1 [Ustilago maydis 521] gi|46100119|gb|EAK85352.1| hypothetical protein UM04303.1 [Ustilago maydis 521] Length = 376 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 36/255 (14%) Query: 10 LGCGASLGVPRIT-------GDWGAC-DPT-NP--KNRRTRSSLKISRVSERGSNTTVIV 58 LG G S VP I GD AC D T NP KNRR R +E ++ +++ Sbjct: 26 LGTGTSGQVPAIHCVTKPDFGDCAACRDATLNPTGKNRRG------CRDAEDKLDSAILI 79 Query: 59 DTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--KRPIDVYAAP 112 D G FY + R + I AVL TH HAD I G+D LR + + +R + +Y Sbjct: 80 DCGKTFYSNAIVHFPRNGIREIRAVLLTHAHADAILGLDDLRAWTMGGVIQRHVPIYLTQ 139 Query: 113 DCMKHLFESFRYCF---KALDDRTYPPIVNPIVIENNDVPICMKSAGG----VIEAIPIL 165 +CM + F Y K+ P + I+ N D P + ++ G ++ +P+L Sbjct: 140 ECMAVVEGMFPYLVDRSKSTGGGDVPTLQWNII--NKDQPFIIPASHGRKEVKVQPLPVL 197 Query: 166 QQH-GRIS---SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 GR+S LGFR + +Y +D + PA +L+ ++ +++DALK H SHFS + Sbjct: 198 HGFLGRVSPFWCLGFRIDSFSYISDCHEIPAATLQLMRGSQAIVMDALKMDRHLSHFSFA 257 Query: 222 ESLKKIELINPKNAI 236 ++L +P A+ Sbjct: 258 QALSFFASFSPPPAL 272 >gi|260885874|ref|ZP_05736054.2| lipoate-protein ligase B [Prevotella tannerae ATCC 51259] gi|260851364|gb|EEX71233.1| lipoate-protein ligase B [Prevotella tannerae ATCC 51259] Length = 195 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +DAVL TH H DH+ G+D LR + + PI YA + +++ YCF++ P Sbjct: 9 LDAVLLTHLHYDHVGGLDDLRPFSFRSSLPI--YANQVTARSIYDHMPYCFQSHAQSIVP 66 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 + +V A + +P+L HG++ LGFR G+ AY TD++ P ES Sbjct: 67 ------RFKLKEVSAYQPFAVRELVILPLLVMHGKMPILGFRIGSFAYITDMSYLPDESF 120 Query: 196 EKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS-T 253 + LQ ++ +++AL+ H +H ++ ++L+ I ++P+ L HM + + + Sbjct: 121 QLLQGVETFVVNALQIKNTHPTHQNIPQALQLIAKLSPRQTYLIHMSHNAGFHADSSNFL 180 Query: 254 PSRVVPAFDGMQ 265 P V A+DG++ Sbjct: 181 PPNVAFAYDGLE 192 >gi|302817877|ref|XP_002990613.1| hypothetical protein SELMODRAFT_429046 [Selaginella moellendorffii] gi|300141535|gb|EFJ08245.1| hypothetical protein SELMODRAFT_429046 [Selaginella moellendorffii] Length = 316 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 40/283 (14%) Query: 2 KDYYHFTILGCGASLGVPR-------------ITGDWGACDPTNPKNRRTRSSLKISRVS 48 +D +LG G+S GVP + A P KN R+ SL I + Sbjct: 9 RDGSELIVLGSGSSTGVPSPVCLLRPSDPPCAVCHKAIALPPQINKNYRSNPSLLIKFLH 68 Query: 49 ERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY----FL 100 G + +D G F QVLR +V +DA+L TH HAD + G+D +RG L Sbjct: 69 GDGELRFIQIDAGKHFKEQVLRWYLPNKVPRLDAILLTHEHADAMLGLDEIRGVQPYDSL 128 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +P+ + + + M + E F Y + + R + IV + D P ++ Sbjct: 129 NRIKPLSCFLSQETMDSVAEKFPYLVQKGVKEGQEIRRVTQLNYKIVQTSCDAPFDVEG- 187 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 +E P+ HG LGF FG VAY +DV+ E S E +D L + Sbjct: 188 ---LEFTPLPVMHGEDYLCLGFLFGRKSRVAYISDVSRILPETEQLISQESGGQVDLLFL 244 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 D L K H++HF +SL+ ++ I PK A+ M + D+++ Sbjct: 245 DTLYKKDKHNTHFCFPQSLEAVKRIRPKRALFVGMTHEFDHEL 287 >gi|302770615|ref|XP_002968726.1| hypothetical protein SELMODRAFT_145906 [Selaginella moellendorffii] gi|300163231|gb|EFJ29842.1| hypothetical protein SELMODRAFT_145906 [Selaginella moellendorffii] Length = 317 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 81/283 (28%), Positives = 124/283 (43%), Gaps = 40/283 (14%) Query: 2 KDYYHFTILGCGASLGVPR-------------ITGDWGACDPTNPKNRRTRSSLKISRVS 48 +D +LG G+S GVP + A P KN R SL I + Sbjct: 10 RDGSELIVLGSGSSTGVPSPVCLLRPSDPPCAVCHKAIALPPQINKNYRCNPSLLIKFLH 69 Query: 49 ERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY----FL 100 G + +D G F QVLR +V +DA+L TH HAD + G+D +RG L Sbjct: 70 GDGELRFIQIDAGKHFKEQVLRWYLPNKVPRLDAILLTHEHADAMLGLDEIRGVQPYNSL 129 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +P+ + + + M + E F Y + + R + IV + D P ++ Sbjct: 130 NRIKPLSCFLSQETMNSVAEKFPYLVQKGVKEGQEIRRVTQLNYKIVQTSCDAPFDVEG- 188 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 +E P+ HG LGF FG VAY +DV+ E S E +D L + Sbjct: 189 ---LEFTPLPVMHGEDYPCLGFLFGRKSRVAYISDVSRILPETEQLISQESGGQVDLLFL 245 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 D L K H++HF +SL+ ++ I PK A+ M + D+++ Sbjct: 246 DTLYKKDKHNTHFCFPQSLEAVKRIRPKRALFVGMTHEFDHEL 288 >gi|224116402|ref|XP_002317290.1| predicted protein [Populus trichocarpa] gi|222860355|gb|EEE97902.1| predicted protein [Populus trichocarpa] Length = 319 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 43/275 (15%) Query: 10 LGCGASLGVPRITGDWGACDP--------------TNPKNRRTRSSLKISRVSER-GSNT 54 LG G S VP + DP NP N R +SL I SE +++ Sbjct: 18 LGTGCSSAVPNVRCLLQPSDPPCSVCSQALSVPPNQNP-NYRCNTSLVIDHYSESDNAHS 76 Query: 55 TVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPI 106 +++D G F QVLR L ID+++ TH HAD + G+D +R + P Sbjct: 77 YILIDVGKTFREQVLRWFTLHNIPRIDSIILTHEHADAVLGLDDIRAVQPYSPINDIDPT 136 Query: 107 DVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + E F Y + + R + I+ E++ P A G I+ Sbjct: 137 PIYLSHHAMDSIAEKFPYLVQKQLKPGQEIRRVAQLDWHIIEEDHQRPFV---ASG-IQF 192 Query: 162 IPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KN 211 +P+ HG SLGF FG VAY +DV+ P+ + + LD LI+D L KN Sbjct: 193 VPLPVMHGEDYISLGFLFGEKCRVAYISDVSRIPSSTEHVISKASAGQLDILILDTLYKN 252 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 G H++HF L ++L+ ++ + PK A+L M + D+ Sbjct: 253 GSHNTHFCLPQTLETVKRLCPKRALLIGMTHEFDH 287 >gi|255581240|ref|XP_002531432.1| conserved hypothetical protein [Ricinus communis] gi|223528951|gb|EEF30944.1| conserved hypothetical protein [Ricinus communis] Length = 326 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 44/286 (15%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE-RGSNTTVIVDTGPDFYMQVLR 70 C SL VP P N R +SL I SE + +++D G F QVLR Sbjct: 52 CLQSLSVP----------PDQNPNYRCNTSLLIDYYSESEEKHKYILIDVGKTFREQVLR 101 Query: 71 ----EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESF 122 ++ +D+++ TH HAD + G+D +R + P+ VY + M + F Sbjct: 102 WFTFHKIPRVDSIILTHEHADAVLGLDDIRTVQPFSPTNEVDPVPVYLSQPTMNSITLKF 161 Query: 123 RYCFK----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFR 177 Y K + R + I+ E+ P A GV + +P+ HG SLGF Sbjct: 162 PYLIKKELRGQEIRHVAQLEWKIIEEDCQRPFV---ASGV-QFVPLPVIHGEDYVSLGFL 217 Query: 178 FGN---VAYCTDVNAFPAE-----SLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIE 228 FG VAY +DV+ FPA S +D LI+D L+ +G H+ HF L +SL+ ++ Sbjct: 218 FGEKSRVAYISDVSRFPASTEYVISKAGAGQVDLLILDTLRRSGSHNVHFCLPQSLEAVK 277 Query: 229 LINPKNAILTHMHVDLDY--DMVLKSTPSR-----VVPAFDGMQFS 267 + PK A+L M ++D+ D V + S+ V AFDG++ + Sbjct: 278 RLCPKQALLIGMGHEIDHYKDNVFLAEWSKREGIPVQLAFDGLRVT 323 >gi|213404224|ref|XP_002172884.1| metallo-beta-lactamase family protein [Schizosaccharomyces japonicus yFS275] gi|212000931|gb|EEB06591.1| metallo-beta-lactamase family protein [Schizosaccharomyces japonicus yFS275] Length = 296 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 30/256 (11%) Query: 34 KNRRTRSSLKISRVSERGSN-TTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADH 88 KNRR +S+ + SE G T+++D G +FY L + + IDAVL THPHAD Sbjct: 42 KNRRRNTSVIVQLDSENGERPKTILIDCGKNFYEAALNVFPKNGLSEIDAVLLTHPHADA 101 Query: 89 IHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCF---KALDDRTYPPIVNPIVIE 144 I+G+D LRG+ + + + +Y + + + Y KA P I Sbjct: 102 INGLDDLRGWTMNGPQSTLHIYLTQETYDTIARAAPYMVDASKATGGGDVPAFTFHIFSP 161 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGR---------ISSLGFRFGNVAYCTDVNAFPAESL 195 N P + + V + P+ HG +GFR N++Y +D N P + Sbjct: 162 EN--PFNLLTCNNV-QVTPLPVHHGSYFGEQKSKPFWCMGFRICNLSYISDTNFIPPSTK 218 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN--PKNAILTHM-----HVDLDYDM 248 ++ +++DAL++ H+SHFS ++ + +E + PK T H D++ Sbjct: 219 SLMEGSKVVVLDALRSFPHASHFSFDQAHEFVESMEKKPKKVFYTGFCHRTEHSDMERAF 278 Query: 249 VLKSTPSRVVPAFDGM 264 P++ PA+DG+ Sbjct: 279 ANLEPPTK--PAYDGL 292 >gi|15835274|ref|NP_297033.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] gi|270285447|ref|ZP_06194841.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] gi|270289458|ref|ZP_06195760.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Weiss] gi|301336844|ref|ZP_07225046.1| hydrolase, metal-dependent, putative [Chlamydia muridarum MopnTet14] gi|8163281|gb|AAF73585.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] Length = 266 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 22/239 (9%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R RSS+ + + + I+DTGPD Q+LR ++ +D V THPH DHI GID LR Sbjct: 38 RLRSSVWV-----QSQGKSFIIDTGPDLRTQLLRYKIHRLDGVFLTHPHYDHIGGIDDLR 92 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKS 154 +++ + P+ V + +L ++ ++ + +LD+ + I+ E + Sbjct: 93 SWYITRLEPVPVVLSSFTYDYLCKTKKHLIQDPSLDNSLAASLRYTILNEQCGE---YEF 149 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL- 213 G + Q++ +++ G+RFG++AY TD++ + L+ L+ ++ ++I A L Sbjct: 150 LGVPFMYVSYFQRNCQVT--GYRFGDLAYLTDMSHYDDRILDYLKGVNTVVISASLGSLP 207 Query: 214 ------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 SH +L ++ ++ I ++TH+ L VL+ P+R A+DGM+ Sbjct: 208 KAFGRRSPSHLTLEQADLLMDKIGASRLVITHVSHYL--HKVLEQDPTREC-AYDGMEL 263 >gi|225443948|ref|XP_002279654.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 325 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 37/258 (14%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE 71 C SL +P P N R +SL I G + +++D G F QV+R Sbjct: 51 CFQSLSLP----------PERNPNYRCNTSLLIDYCQNNGEHKYILIDVGKTFREQVIRW 100 Query: 72 ----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD + G+D +R P VY + M+ + F Sbjct: 101 FTFYKIPQVDSIILTHEHADAVLGLDDMRAVQPFSPTNDISPTPVYLSQYAMESIATKFP 160 Query: 124 YCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFR 177 Y K + R + I+ N++ P A G ++ +P+ HG LGF Sbjct: 161 YLVKKKLKEGQELRRVAQLDWKIIESNHEKPFV---ASG-LQFVPLPVMHGEDYLCLGFL 216 Query: 178 FGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIE 228 FG VAY +D++ FP+ + + LD LI+D L K G H++HF ++L+ ++ Sbjct: 217 FGEKCKVAYISDISRFPSSTEYVISKNGGGQLDLLILDTLYKKGSHNTHFCFPQTLEAVK 276 Query: 229 LINPKNAILTHMHVDLDY 246 I PK A+L M + D+ Sbjct: 277 RICPKRALLVGMTHEFDH 294 >gi|168038334|ref|XP_001771656.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677095|gb|EDQ63570.1| predicted protein [Physcomitrella patens subsp. patens] Length = 311 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/276 (29%), Positives = 121/276 (43%), Gaps = 40/276 (14%) Query: 9 ILGCGASLGVPRITGDWGACDP--------------TNPKNRRTRSSLKISRVSERGSNT 54 +LG G+S GVP DP NP N R SL IS + G Sbjct: 11 VLGSGSSTGVPSPLCVINPTDPPCNVCRMAMEGPHELNP-NYRCNPSLLISYLHNDGQRR 69 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPI 106 + +D G DF QVLR ++ +DA++ TH HAD + G+D +RG F P+ Sbjct: 70 YIQIDAGKDFKEQVLRWFIPYKIPRLDALILTHEHADAMLGLDNVRGVQPVNFKNDIPPM 129 Query: 107 DVYAAPDCMKHLFESFRYCF----KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 V+ M + F Y K ++ + VIE + I + G + Sbjct: 130 PVFVTQHTMDSVALKFPYLASKKRKEGEELRRVAQFDWRVIEPS---IDTRFQAGGLTFT 186 Query: 163 PILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNG 212 P+ HG LGF FG VAY +DV+ P + + +DFL +D+L K Sbjct: 187 PLPVYHGEDYICLGFLFGEKTRVAYISDVSRIPTRTEHAIAKYGAGQVDFLFLDSLYKET 246 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 H++H + ESLK I+ + PK A L M + ++D+ Sbjct: 247 PHNTHMTFPESLKVIKKLQPKRAFLIGMTHEFEHDL 282 >gi|297740764|emb|CBI30946.3| unnamed protein product [Vitis vinifera] Length = 406 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 27/240 (11%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPH 85 P N R +SL I G + +++D G F QV+R ++ +D+++ TH H Sbjct: 140 PERNPNYRCNTSLLIDYCQNNGEHKYILIDVGKTFREQVIRWFTFYKIPQVDSIILTHEH 199 Query: 86 ADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPP 136 AD + G+D +R P VY + M+ + F Y K + R Sbjct: 200 ADAVLGLDDMRAVQPFSPTNDISPTPVYLSQYAMESIATKFPYLVKKKLKEGQELRRVAQ 259 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPA 192 + I+ N++ P A G ++ +P+ HG LGF FG VAY +D++ FP+ Sbjct: 260 LDWKIIESNHEKPFV---ASG-LQFVPLPVMHGEDYLCLGFLFGEKCKVAYISDISRFPS 315 Query: 193 ESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + + LD LI+D L K G H++HF ++L+ ++ I PK A+L M + D+ Sbjct: 316 STEYVISKNGGGQLDLLILDTLYKKGSHNTHFCFPQTLEAVKRICPKRALLVGMTHEFDH 375 >gi|91775840|ref|YP_545596.1| putative hydrolase protein [Methylobacillus flagellatus KT] gi|91709827|gb|ABE49755.1| putative hydrolase protein [Methylobacillus flagellatus KT] Length = 150 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 7/153 (4%) Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M+H+ F Y + D PI++ P+ +E IP+ HGR+ Sbjct: 1 MEHIVSKFGYAIRDPGDYWDLPILSV-------SPVEQAFELFNVEIIPVPILHGRLEMY 53 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 G+R G +AY TD +A P SLE LQ LD L++D L+ H +HFSL +SL++ +I K Sbjct: 54 GYRLGRLAYLTDASAIPEASLELLQGLDVLLLDCLRYTPHYTHFSLEQSLEQAAIIGAKQ 113 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 L HM +++Y+ V K PS V +DG++ Sbjct: 114 TYLIHMTHEMEYEAVSKMLPSSVQVGYDGLKLE 146 >gi|164658606|ref|XP_001730428.1| hypothetical protein MGL_2224 [Malassezia globosa CBS 7966] gi|159104324|gb|EDP43214.1| hypothetical protein MGL_2224 [Malassezia globosa CBS 7966] Length = 388 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 56/306 (18%) Query: 10 LGCGASLGVPRI------TGDWGAC-DPTNP--KNRR--TRSSLKISRVSERGSNTTVIV 58 LG G S VP I D C D P KNRR T + ++ S+ G+++T+++ Sbjct: 18 LGTGTSSQVPAIHCITDKNSDCVTCTDAMKPGSKNRRFCTSAIVRGSKQGCPGTSSTILI 77 Query: 59 DTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--KRPIDVYAAP 112 D G FY LR + +IDA+L TH HAD + G+D LR + + + +DVY Sbjct: 78 DCGKSFYESALRYFPVYGLRNIDALLLTHAHADAMLGLDDLRSWTMNACIQTHVDVYLTR 137 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-- 170 +CM + ++F Y T V + D + + P+ +HG Sbjct: 138 ECMDTVQQTFPYLVDT-SRATGGGDVGALRWHIIDPHTPFLAGPQQVPVQPLYVEHGYTH 196 Query: 171 -----ISSLGFRFGNVAYCTDV-----------------NAFPAESLEKLQNLDFLIIDA 208 + LGFR +++Y +D + P ++EK+ D I+D Sbjct: 197 GGRVPFACLGFRIDSMSYISDCVRTSGCTHLCRRRSNSQHHIPETTMEKVVGSDLFILDG 256 Query: 209 LKNGLHSSHFSLSESLKKI----------ELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 LK H+SHFS+ +++ +L P +LT D+ + + ST S++V Sbjct: 257 LKMNRHTSHFSIPQAITCTLDLCMRHAHRQLSPPSLTVLT----DITHRLEHHSTESQIV 312 Query: 259 PAFDGM 264 DG+ Sbjct: 313 TLLDGL 318 >gi|330508177|ref|YP_004384605.1| metallo-beta-lactamase domain-containing protein [Methanosaeta concilii GP-6] gi|328928985|gb|AEB68787.1| metallo-beta-lactamase domain protein [Methanosaeta concilii GP-6] Length = 247 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 33/257 (12%) Query: 8 TILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G ++G P+I AC ++RR R S+ + E G V+VD+ PD Sbjct: 4 TLLGTGDAIGTPKIGCKCPACMDALRGGRSRRMRFSILLESDEEDGR---VLVDSSPDLR 60 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L++ + S+D V++TH H DH G G F + + +DVYA + M ++ + Sbjct: 61 WQLLKKDIASVDGVIWTHAHYDHYAGF----GDFHRVQSHVDVYALKNTMDYILNYLYFL 116 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----V 181 D VI I AG + H I ++G R N V Sbjct: 117 APVRHD----------VIAGQPFEI----AGMQFTLFNV--NHPPIETVGVRIDNGSKVV 160 Query: 182 AYCTDVN-AFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILT 238 +D P ESLE +++ D ++ DA+ + S H + E+++ E + K ILT Sbjct: 161 VITSDTKMEVPEESLELMRDADLMLADAITPPGYTISKHMTADEAMELAERLGTKRLILT 220 Query: 239 HM-HVDLDYDMVLKSTP 254 H+ H+ ++ LK P Sbjct: 221 HLSHLYPPHEEALKKWP 237 >gi|255584503|ref|XP_002532980.1| catalytic, putative [Ricinus communis] gi|223527244|gb|EEF29404.1| catalytic, putative [Ricinus communis] Length = 294 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS-NTTVIVDTGPDFYMQV 68 LG G S VP N +SL I SE + +++D G F QV Sbjct: 22 LGTGCSSAVP---------------NAMCNTSLLIDYYSESDEKHKYILIDVGKTFREQV 66 Query: 69 LR----EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFE 120 LR ++ +D+++ TH HAD + G+D +R P +Y + M + Sbjct: 67 LRWFTFHKIPLVDSIILTHEHADAVLGLDDIRAVQPFSPTNDIDPTSIYLSQFAMDSIAV 126 Query: 121 SFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 F Y K + R + I+ E++ P ++G +P++ IS LG Sbjct: 127 KFPYLVKKKLKEGQEVRRVAQLDWQIIEEDSQRPFV--TSGLKFVPLPVMHGEDYIS-LG 183 Query: 176 FRFGN---VAYCTDVNAFPAE-----SLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKK 226 F FG VAY +D++ FPA S LD LI+D L K G H++HF ++L+ Sbjct: 184 FLFGEKSRVAYISDISRFPASTEYVISKAGAGQLDLLILDTLYKTGSHNTHFCFPQTLEA 243 Query: 227 IELINPKNAILTHMHVDLDY----DMVLKSTPSRVVP---AFDGMQ 265 ++ + PK A+L M + D+ D +++ + +P A DGM+ Sbjct: 244 VKRLCPKRALLIGMTHEFDHHKDNDFLMEWSKREGIPVQLAHDGMR 289 >gi|237802804|ref|YP_002887998.1| metal-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|231274038|emb|CAX10832.1| metal-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] Length = 266 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 40/274 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P C + + R RSS+ V +G N I+DTGPD Q+L Sbjct: 13 LGTGDSEGIPVPFCSCEVC--SQGRICRLRSSV---WVQSQGKN--FIIDTGPDLRTQLL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-- 127 R +V +D V THPH DHI GID LR +++ + + + +L ++ + + Sbjct: 66 RYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKTKEHLVRKE 125 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 +L I+N E + I + Q++ +++ G+RFG++AY Sbjct: 126 TPNNSLAASLRYTILNEKCGEQEFLGI-------PFTYVSYFQKNCQVT--GYRFGDLAY 176 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHS---SHFSLSESLKKIELINPKNAI 236 TD++ + + ++ LQ ++ +I+ A L S SH +L ++ +E + + Sbjct: 177 LTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGASRLV 236 Query: 237 LTH----MHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +TH +H L+ D+ + A+DGM+ Sbjct: 237 ITHVSHYLHKVLEKDVTREC-------AYDGMEL 263 >gi|15605104|ref|NP_219889.1| metal-dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76789110|ref|YP_328196.1| metal-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|237804726|ref|YP_002888880.1| metal-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|255348745|ref|ZP_05380752.1| metal-dependent hydrolase [Chlamydia trachomatis 70] gi|255503285|ref|ZP_05381675.1| metal-dependent hydrolase [Chlamydia trachomatis 70s] gi|255506963|ref|ZP_05382602.1| metal-dependent hydrolase [Chlamydia trachomatis D(s)2923] gi|3328805|gb|AAC67976.1| predicted metal dependent hydrolase (histidinic triad) [Chlamydia trachomatis D/UW-3/CX] gi|76167640|gb|AAX50648.1| metal-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|231273026|emb|CAX09939.1| metal-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|296435900|gb|ADH18074.1| metal-dependent hydrolase [Chlamydia trachomatis G/9768] gi|296436826|gb|ADH18996.1| metal-dependent hydrolase [Chlamydia trachomatis G/11222] gi|296437760|gb|ADH19921.1| metal-dependent hydrolase [Chlamydia trachomatis G/11074] gi|297140260|gb|ADH97018.1| metal-dependent hydrolase [Chlamydia trachomatis G/9301] gi|297748510|gb|ADI51056.1| Metal-dependent hydrolase [Chlamydia trachomatis D-EC] gi|297749390|gb|ADI52068.1| Metal-dependent hydrolase [Chlamydia trachomatis D-LC] Length = 266 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 40/274 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P C + + R RSS+ V +G N I+DTGPD Q+L Sbjct: 13 LGTGDSEGIPVPFCSCEVC--SQGRICRLRSSV---WVQSQGKN--FIIDTGPDLRTQLL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-- 127 R +V +D V THPH DHI GID LR +++ + + + +L ++ + + Sbjct: 66 RYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKTKEHLVQKE 125 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 +L I+N E + I + Q++ +++ G+RFG++AY Sbjct: 126 TPNNSLAASLRYTILNEKCGEQEFLGI-------PFTYVSYFQKNCQVT--GYRFGDLAY 176 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHS---SHFSLSESLKKIELINPKNAI 236 TD++ + + ++ LQ ++ +I+ A L S SH +L ++ +E + + Sbjct: 177 LTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGASRLV 236 Query: 237 LTH----MHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +TH +H L+ D+ + A+DGM+ Sbjct: 237 ITHVSHYLHKVLEKDVTREC-------AYDGMEL 263 >gi|255311186|ref|ZP_05353756.1| metal-dependent hydrolase [Chlamydia trachomatis 6276] gi|255317487|ref|ZP_05358733.1| metal-dependent hydrolase [Chlamydia trachomatis 6276s] Length = 266 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 40/274 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P C + + R RSS+ V +G N I+DTGPD Q+L Sbjct: 13 LGTGDSEGIPVPFCSCEVC--SQGRICRLRSSV---WVQSQGKN--FIIDTGPDLRTQLL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-- 127 R +V +D V THPH DHI GID LR +++ + + + +L ++ + + Sbjct: 66 RYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKTKEHLVQKE 125 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 +L I+N E + I + Q++ +++ G+RFG++AY Sbjct: 126 TPNNSLAASLRYTILNEKCGEQEFLGI-------PFTYVSYFQKNCQVT--GYRFGDLAY 176 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHS---SHFSLSESLKKIELINPKNAI 236 TD++ + + ++ LQ ++ +I+ A L S SH +L ++ +E + + Sbjct: 177 LTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRMPSHLTLEQADLLMEKVGASRLV 236 Query: 237 LTH----MHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +TH +H L+ D+ + A+DGM+ Sbjct: 237 ITHVSHYLHKVLEKDVTREC-------AYDGMEL 263 >gi|289525421|emb|CBJ14898.1| metal-dependent hydrolase [Chlamydia trachomatis Sweden2] gi|296434974|gb|ADH17152.1| metal-dependent hydrolase [Chlamydia trachomatis E/150] gi|296438694|gb|ADH20847.1| metal-dependent hydrolase [Chlamydia trachomatis E/11023] Length = 275 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 44/276 (15%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G S G+P C + + R RSS+ V +G N I+DTGPD Q+L Sbjct: 13 LGTGDSEGIPVPFCSCEVC--SQGRICRLRSSV---WVQSQGKN--FIIDTGPDLRTQLL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF--K 127 R +V +D V THPH DHI GID LR +++ + + + SF Y + K Sbjct: 66 RYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPI---------ILSSFTYDYLCK 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAG-----GV-IEAIPILQQHGRISSLGFRFGNV 181 + N + + I + G G+ + Q++ +++ G+RFG++ Sbjct: 117 TKEHLVQKETPNNSLAASLRYTILNEKCGEQEFLGIPFTYVSYFQKNCQVT--GYRFGDL 174 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHS---SHFSLSESLKKIELINPKN 234 AY TD++ + + ++ LQ ++ +I+ A L S SH +L ++ +E + Sbjct: 175 AYLTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGASR 234 Query: 235 AILTH----MHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++TH +H L+ D+ + A+DGM+ Sbjct: 235 LVITHVSHYLHKVLEKDVTREC-------AYDGMEL 263 >gi|218512415|ref|ZP_03509255.1| hypothetical protein Retl8_01344 [Rhizobium etli 8C-3] Length = 64 Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 1/58 (1%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + G TTV+VDT F Sbjct: 7 FTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGPDGV-TTVVVDTRAGF 63 >gi|298675725|ref|YP_003727475.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] gi|298288713|gb|ADI74679.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] Length = 247 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 41/271 (15%) Query: 8 TILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G + GVP I C +N KN+RTR S+ + S+ G +++DT PD Sbjct: 4 TLLGTGDTTGVPVIGCHCPTCTDAYSNDKNKRTRFSILVE--SDAGK---ILIDTSPDMK 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q++ V +D V++TH H DH G F + ++ +DVY P+ + ++ + F + Sbjct: 59 WQLIANDVSGVDGVIWTHGHYDHFAGFPE----FYRVQKKVDVYGVPETLDYIMDYFHFL 114 Query: 126 F-KALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + D + Y P + ++ E N +PI K A GV+ + + ++ G Sbjct: 115 KPRRHDVQLYEPFELIGLTFVLFEVNHLPI--KKAVGVM----VCEGEKKVVITG----- 163 Query: 181 VAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGLHSS---HFSLSESLKKIELINPKNAI 236 D N P +S++ + D L++DA+ +S H + ++L E I K + Sbjct: 164 -----DTNKDVPQKSMDLIHKPDLLVVDAIVPPSITSIKKHMNAIQALDFSEKIKAKKVV 218 Query: 237 LTHM-HVDLDYDMVLKSTPSRVVPAFDGMQF 266 HM H +D K+ P +DGM+F Sbjct: 219 FVHMSHFFKPHDEESKNYPL----GYDGMKF 245 >gi|242086278|ref|XP_002443564.1| hypothetical protein SORBIDRAFT_08g021620 [Sorghum bicolor] gi|241944257|gb|EES17402.1| hypothetical protein SORBIDRAFT_08g021620 [Sorghum bicolor] Length = 326 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 35/257 (13%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL VP P N R +SL I + G++ +I+D G F QVLR Sbjct: 52 CSQSLSVP----------PELNPNYRCNTSLLIDYCQDEGAHKYIIIDVGKTFREQVLRW 101 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D++L TH HAD I G+D +R P +Y + M + + F Sbjct: 102 FVRHKIPCVDSILLTHEHADAILGLDDVRVVQPFSPTNDIDPTPIYLSQFAMDSISQKFP 161 Query: 124 YC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRF 178 Y K ++ ++ +IE +D+ ++G +E +P+ HG LGF F Sbjct: 162 YLVKKKLKEGEEIRRVAQLDWKIIE-SDIQKPFITSG--LEFVPLPVIHGEDYICLGFLF 218 Query: 179 G---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIEL 229 G VAY +DV+ FP + + LD LI+D L + G H+ H ++L + Sbjct: 219 GRKSKVAYISDVSRFPPSTEYAISKCGGGQLDLLILDCLYRTGSHNVHLCWDQTLDAVRR 278 Query: 230 INPKNAILTHMHVDLDY 246 I PK A+L M ++D+ Sbjct: 279 ICPKRALLIGMTHEMDH 295 >gi|326513952|dbj|BAJ92126.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 337 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 33/256 (12%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL VP P N R +SL I + G++ +I+D G F QVLR Sbjct: 63 CSQSLSVP----------PELNPNYRCNTSLLIDYCQDEGAHKYIIIDVGKTFREQVLRW 112 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD I G+D +R P +Y + M + + F Sbjct: 113 FVCHKIPCVDSIILTHEHADAILGLDDVRVVQPFSPSNDIDPTPIYLSQYAMDSISQKFP 172 Query: 124 YC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y K ++ ++ +IE +D+ ++G +P++ I LGF FG Sbjct: 173 YLVKKKLKEGEEVRRVAQLDWRIIE-SDLQKPFTASGLQFVPLPVIHGEDYI-CLGFLFG 230 Query: 180 ---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIELI 230 VAY +DV+ FP + + + LD LI+D L + G H+ H ++L I+ I Sbjct: 231 IKSKVAYVSDVSRFPPSTEDAISKSGGGQLDLLILDCLYRTGSHNVHLCWDQTLDAIKRI 290 Query: 231 NPKNAILTHMHVDLDY 246 PK A+L + ++D+ Sbjct: 291 CPKKALLIGLTHEMDH 306 >gi|222617483|gb|EEE53615.1| hypothetical protein OsJ_36876 [Oryza sativa Japonica Group] Length = 390 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 32/240 (13%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHAD 87 NP N R +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD Sbjct: 71 NP-NYRCNTSLLIDYCQDENAHKYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHAD 129 Query: 88 HIHGIDGLRGYFLKQK-------RPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPP 136 I G+D +R + Q P +Y + M + + F Y K ++ Sbjct: 130 AILGLDDVR---IVQSFSPTNDIEPTPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVA 186 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPA 192 ++ VIE +D+ I ++G +E +P+ HG LGF FG VAY +DV+ FP Sbjct: 187 QLDWRVIE-SDLQIPFVTSG--LEFVPLPVIHGEDYICLGFLFGRKSKVAYISDVSWFPP 243 Query: 193 ESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + + LD LI+D L + G H+ H ++L ++ I PK A+L M ++D+ Sbjct: 244 STEHAISKSGGGQLDLLILDCLSRTGSHNVHLCWDQTLDAVKRICPKRALLIGMTDEMDH 303 >gi|219123117|ref|XP_002181877.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406478|gb|EEC46417.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 372 Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 37/271 (13%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHP 84 DP KN R SL I+ + G V++D G F LR + S+DAV+ TH Sbjct: 98 DPKTNKNYRNNPSLVIA-FDDNGVQKHVLIDCGKTFREGALRWFPTLGINSLDAVVLTHE 156 Query: 85 HADHIHGIDGLRGYFLKQ----------KRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 HAD G+D +RG+ + + P+ +Y + C+ + E F + F L R Sbjct: 157 HADAAFGLDDVRGFQRTEGGFAGNSQFRQVPMPLYVSQQCLNEIAERFPWLFPELQSRAD 216 Query: 135 PPIVNPIVIENNDVPI---CMKSAGGV----IEAIPILQQHGR-ISSLGFRF----GNVA 182 +V+ V++ + + M+ V +E IP+ HG + S G+ F NV Sbjct: 217 IALVDKAVVKRHVASLDVHVMEPFKAVNIEGLEIIPLPVMHGEDLVSFGYAFTVGQTNVV 276 Query: 183 YCTDVNAFPAESLEKLQN----LDFLIIDALKNGLHSS-HFSLSESLKKIELINPKNAIL 237 Y +D++ E+L + D L++DAL + HFSL+ +L + I P+ + Sbjct: 277 YLSDISRMLPETLAFISKSRPPTDILVVDALHPTRDNPVHFSLNYALNLVNEIKPRRTFV 336 Query: 238 THMHVD--LDYDMV---LKSTPSRVVPAFDG 263 M+ D L +D L+ + + A+DG Sbjct: 337 VGMNCDSFLPHDQANKDLRDSYVNIQLAYDG 367 >gi|30691663|ref|NP_174321.2| unknown protein [Arabidopsis thaliana] gi|38566676|gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gi|40824143|gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gi|332193083|gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] Length = 324 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 35/257 (13%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL +P P N R +SL I G + + +D G F QVLR Sbjct: 50 CSQSLSIP----------PEKNPNYRGNTSLLIDYCQSDGKHKYIQIDVGKTFREQVLRW 99 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD + G+D +R P ++ + M+ L F Sbjct: 100 FTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAMESLAVKFP 159 Query: 124 YCF-KALDD----RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y K L + R + ++ E+ + P ++G +P++ + LGF F Sbjct: 160 YLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFV--ASGLSFTPLPVMHGEDYVC-LGFLF 216 Query: 179 GN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIEL 229 G VAY +DV+ FP + + LD LI+D L K G H++H ++L I+ Sbjct: 217 GEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLILDTLYKTGSHNTHLCFPQTLDTIKR 276 Query: 230 INPKNAILTHMHVDLDY 246 ++PK A+L M + D+ Sbjct: 277 LSPKRALLIGMTHEFDH 293 >gi|12320859|gb|AAG50569.1|AC073506_11 hypothetical protein [Arabidopsis thaliana] Length = 323 Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 35/257 (13%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL +P P N R +SL I G + + +D G F QVLR Sbjct: 49 CSQSLSIP----------PEKNPNYRGNTSLLIDYCQSDGKHKYIQIDVGKTFREQVLRW 98 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD + G+D +R P ++ + M+ L F Sbjct: 99 FTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAMESLAVKFP 158 Query: 124 YCF-KALDD----RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y K L + R + ++ E+ + P ++G +P++ + LGF F Sbjct: 159 YLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFV--ASGLSFTPLPVMHGEDYVC-LGFLF 215 Query: 179 GN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIEL 229 G VAY +DV+ FP + + LD LI+D L K G H++H ++L I+ Sbjct: 216 GEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLILDTLYKTGSHNTHLCFPQTLDTIKR 275 Query: 230 INPKNAILTHMHVDLDY 246 ++PK A+L M + D+ Sbjct: 276 LSPKRALLIGMTHEFDH 292 >gi|166154590|ref|YP_001654708.1| metal-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|166155465|ref|YP_001653720.1| metal-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335857|ref|ZP_07224101.1| metal-dependent hydrolase [Chlamydia trachomatis L2tet1] gi|165930578|emb|CAP04075.1| metal-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|165931453|emb|CAP07029.1| metal-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 266 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 40/274 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G G+P C + + R RSS+ V +G N I+DTGPD Q+L Sbjct: 13 LGTGDPEGIPVPFCSCEVC--SQGRICRLRSSV---WVQSQGKN--FIIDTGPDLRTQLL 65 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-- 127 R +V +D V THPH DHI GID LR +++ + + + +L ++ + + Sbjct: 66 RYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKTKEHLVQKE 125 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 +L I+N E + I + Q++ +++ G+RFG++AY Sbjct: 126 TPNNSLAASLRYTILNEKCGEQEFLGI-------PFTYVSYFQKNCQVT--GYRFGDLAY 176 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHS---SHFSLSESLKKIELINPKNAI 236 TD++ + + ++ LQ ++ +I+ A L S SH +L ++ +E + + Sbjct: 177 LTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGASRLV 236 Query: 237 LTH----MHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +TH +H L+ D+ + A+DGM+ Sbjct: 237 ITHVSHYLHKVLEKDVTREC-------AYDGMEL 263 >gi|226509254|ref|NP_001140959.1| hypothetical protein LOC100273038 [Zea mays] gi|194701942|gb|ACF85055.1| unknown [Zea mays] gi|195620596|gb|ACG32128.1| hydrolase-like protein [Zea mays] Length = 328 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 37/258 (14%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL VP P N R +SL I + ++ +I+D G F QVLR Sbjct: 54 CSQSLSVP----------PELNPNYRCNTSLLIDYCQDERAHKYIIIDVGKTFREQVLRW 103 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D++L TH HAD I G+D +R P +Y + M + + F Sbjct: 104 FVRHKIPCVDSILLTHEHADAILGLDDVRVVQPFSPTNDIDPTPIYLSQFAMDSICQKFP 163 Query: 124 YCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFR 177 Y K + R + I+ +D+ ++G +E +P+ HG LGF Sbjct: 164 YLVKKKLKEGEEVRRVAQLEWKII--ESDIQKPFTTSG--LEFVPLPVIHGEDYICLGFL 219 Query: 178 FG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIE 228 FG VAY +DV+ FP + + LD LI+D L + G H+ H ++L + Sbjct: 220 FGRKSKVAYISDVSRFPPSTEYAISKSGGGQLDLLILDCLYRTGSHNVHLCWDQTLDAVR 279 Query: 229 LINPKNAILTHMHVDLDY 246 I PK A+L M ++D+ Sbjct: 280 RICPKRALLIGMTHEMDH 297 >gi|11498089|ref|NP_069314.1| ATP-binding protein PhnP (phnP) [Archaeoglobus fulgidus DSM 4304] gi|2650153|gb|AAB90764.1| ATP-binding protein PhnP (phnP) [Archaeoglobus fulgidus DSM 4304] Length = 254 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 33/255 (12%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S G P + C+ K R R S+ + + + TV++DT PD Sbjct: 4 TLLGTGDSPGTPILNCHCRTCEDARRKGWERKRFSVMV-----QNNGKTVLIDTSPDLRR 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAV++TH H DH G G F + + + VY+ P + + ++ Sbjct: 59 QLLDCGVEKVDAVIWTHCHFDHFGGF----GEFYRVQNNVKVYSTPQIHEDIGHFMKFM- 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +Y P V EN + AG +P+ H +S++G + Y Sbjct: 114 ------SYKP-VEVEAFENFTI------AGMDFTLLPV--NHPPVSAVGVKVEWKGYKVV 158 Query: 187 VNA-----FPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 V+ P +L ++QN D LI++AL G H + E+L+ + +N +LTH+ Sbjct: 159 VSGDTNVRIPEATLREMQNPDLLIVEALAPTGRFRKHMNAKEALELAKRLNAGKVVLTHL 218 Query: 241 -HVDLDYDMVLKSTP 254 H + + +KS P Sbjct: 219 GHFFPPHHLAIKSYP 233 >gi|124485836|ref|YP_001030452.1| hypothetical protein Mlab_1016 [Methanocorpusculum labreanum Z] gi|124363377|gb|ABN07185.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 239 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 116/244 (47%), Gaps = 25/244 (10%) Query: 8 TILGCGASLGVPRITGDWGAC-DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G +G P+I + C + +R R+SL V +G + +++DTGPD Sbjct: 4 TALGTGDVVGTPKIGCECPICREAKEMGKQRLRTSL---LVEHKGRH--LLIDTGPDMRA 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L IDAV++TH H DH G ++ Q+ PI VY AP+ + + F CF Sbjct: 59 QLLAADSPRIDAVIWTHGHYDHFMGFG---DFYRVQREPISVYGAPEVLAYCGGIF--CF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ + P PI I +V + V+ P RI++ G F Y D Sbjct: 114 IRHEEHSVKPF-EPIDICGMEVTLF-----PVVHDTPTYGV--RITADGKTF---VYSCD 162 Query: 187 VNAFPAE-SLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESLKKIELINPKNAILTHMHVD 243 A +E SLE+++ D L++D + G++ S H ++ ++ + E + PK HM Sbjct: 163 TRAELSEASLEQMKGADLLLLDGIFPPGVNISKHMNIEDAERLAENLAPKEFWCVHMSHK 222 Query: 244 LDYD 247 + +D Sbjct: 223 IPWD 226 >gi|294494876|ref|YP_003541369.1| beta-lactamase [Methanohalophilus mahii DSM 5219] gi|292665875|gb|ADE35724.1| beta-lactamase domain protein [Methanohalophilus mahii DSM 5219] Length = 248 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 28/265 (10%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G + G P I + C + R I SE+G T+++DTGPD Q Sbjct: 4 TLLGTGDAPGTPIIGCNCLTCQDGLKGGKSNRLRCSILVESEKG---TILLDTGPDLRQQ 60 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + +D V++TH H DH G G F + +R +DVY + + ++ E + Sbjct: 61 LLEHNIKHVDGVIWTHGHYDHFTGF----GEFHRVQRKVDVYGLAETLDYILEYLAF--- 113 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P N + I I ++ ++ P+ G I + V + D Sbjct: 114 ------LRPRRNNVKINETFEIIGLRITLFEVKHRPVSNPVGVIIEENGK--KVVFTGDC 165 Query: 188 N-AFPAESLEKLQNLDFLIIDAL---KNGLH-SSHFSLSESLKKIELINPKNAILTHM-H 241 P +SLE + + D LI DA+ + LH H ++L+ + I K + TH+ H Sbjct: 166 ERQIPQKSLEMIDSPDLLIADAIVPDSDVLHIKKHMDAKDALELAQKIKAKEVVFTHISH 225 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 + + + P +DGMQF Sbjct: 226 FFKPHSIAAQEFPM----GYDGMQF 246 >gi|326507544|dbj|BAK03165.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 321 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 32/238 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL + + G++ +++D G F QVLR +V +D+++ TH H Sbjct: 52 PEGNPNYRLNTSLLVDYCHDDGTHKYILIDIGKTFREQVLRWFVHHKVPYVDSIILTHEH 111 Query: 86 ADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKAL-----DDRTYPP 136 AD + G+D + + R I ++ M + F Y + +D Sbjct: 112 ADAVLGLDEVWVVQPRNGRNDVEQIPIFLTQFTMDSIARRFPYLVEQKPEDGDEDAQAAK 171 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---VAYCTDVNAFPAE 193 I I+ E+ D P ++G +P++ G I LGF FG VAY +DV+ F E Sbjct: 172 IDWKIIEEDVDKPFV--ASGLEFVPLPVMHGEGYIC-LGFLFGRRARVAYLSDVSRFLPE 228 Query: 194 SLEKL-----QNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHM 240 + + +D LI++A N LH S+H +LSESL I+ I+PK A+L M Sbjct: 229 TEHAILKSGAGQVDLLILEA--NSLHGVGDSFSTHLTLSESLDAIKRIHPKRALLIGM 284 >gi|320334350|ref|YP_004171061.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755639|gb|ADV67396.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 259 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 78/279 (27%), Positives = 118/279 (42%), Gaps = 44/279 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVPR + C NRRTRSS + RG+ +V++D GPD Sbjct: 5 LTFLGTSDSQGVPRWSCTCAVCADARAGGANRRTRSSALL-----RGAGESVLLDCGPDL 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + Q+ RE V +D + +H H DH+ G+ L RP+ ++A D + + F Y Sbjct: 60 HAQLTREGVTHLDHAVISHAHNDHLMGLGDLLD-VRAAPRPV-IHAPADVIPEVAARFAY 117 Query: 125 CFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN-- 180 F+ A R P + +++AG + A + HG S FR Sbjct: 118 AFRNASPVRALP-------------EVGLQAAGLTLRAFRV--PHGDNGDSHAFRLDGPS 162 Query: 181 --VAYCTDVNAFP-AESLEKLQNLDFLI---------IDALKNGLHSSHFSLSESLKKIE 228 AY TD P A + + L+NLD LI +DA + H S + + E+ Sbjct: 163 VRAAYVTDALRIPDALAAQWLKNLDLLILGTSFRAESLDATRT--HRSVYDVHEARALSW 220 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 + +LTH+ D+D+ P A DG+ + Sbjct: 221 AVRTPRVLLTHL--SHDHDVRAPDLPHGWAYAHDGLTIT 257 >gi|255581242|ref|XP_002531433.1| catalytic, putative [Ricinus communis] gi|223528952|gb|EEF30945.1| catalytic, putative [Ricinus communis] Length = 303 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 32/236 (13%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGI 92 R +SL I + + +++D G F QVLR ++ +D+++ TH HAD + G+ Sbjct: 43 RCNTSLLIDYYQSKEEHKYILIDVGKTFREQVLRWFTFHKIPRVDSIVLTHEHADAVLGL 102 Query: 93 DGLRGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIE 144 D +R PI VY + M + F Y K + + ++ ++IE Sbjct: 103 DDVRAVQGFSPTNDTDPIPVYLSQFSMDSVALRFPYLTKKRLREGEKKKRVAQLDWMIIE 162 Query: 145 NNDVPICMKS--AGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKL 198 + C + A G ++ IP+ HG+ LGF FG VAY +DV+ FP ES E + Sbjct: 163 ED----CQRPFVASG-LQFIPLPVMHGKDYIYLGFLFGKKSRVAYISDVSRFP-ESTEYV 216 Query: 199 ------QNLDFLIIDALKN--GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 LD LI++A + G +HF LS++L+ ++ + PK A+LT M + D+ Sbjct: 217 ISKAGAGQLDLLILEASRKSGGPGGAHFCLSQTLEALKRLYPKQALLTGMGHEFDH 272 >gi|284161362|ref|YP_003399985.1| beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011359|gb|ADB57312.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631] Length = 253 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 37/257 (14%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S G+P I C+ K R R S+ I + +++DT PD Sbjct: 4 TLLGTGDSTGIPIIGCHCKTCEDARKKGWERKRFSVMI-----QNEGKILLIDTSPDMRR 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL--FESFRY 124 Q+L V +DAV++TH H DH G G F + + + VY P + F SF Sbjct: 59 QLLDTNVDRVDAVIWTHCHFDHFGGF----GNFYRVQSDVKVYTTPKIHDDIGKFMSFME 114 Query: 125 CFKALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +K ++ Y P + + E N P+ A GV +I G++ Sbjct: 115 -YKPIEVECYEPFELIGLKITLFEVNHPPV---DAIGV-----------KIEWNGYK--- 156 Query: 181 VAYCTDVNA-FPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILT 238 + D NA P SLE+++ D I++AL G H + E+L + I + +LT Sbjct: 157 IVVSGDTNADIPKRSLEEMEEPDLFIVEALAPRGRFKKHMNAEEALSLAKKIRARKTVLT 216 Query: 239 HM-HVDLDYDMVLKSTP 254 H+ H +D+ +K P Sbjct: 217 HVGHFFPPHDIAVKKYP 233 >gi|255638562|gb|ACU19588.1| unknown [Glycine max] Length = 308 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 38/261 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSER-GSNTTVIVDTGPDFYMQV 68 L C SL +P P N R +SL I S+ ++ +++D G F V Sbjct: 31 LVCTQSLSLP----------PHLNPNYRCNTSLLIDYYSQSDATHKYILIDAGKTFRETV 80 Query: 69 LREQVL----SIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFE 120 LR V ID++L TH HAD + G+D +R P +Y M + + Sbjct: 81 LRWFVFHHIPRIDSILLTHEHADAVLGLDDIRAVQPFSPTNDIDPTPIYLTQHSMDSMEK 140 Query: 121 SFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSL 174 F Y + + R I+ ++ ++P SA G ++ IP+ HG L Sbjct: 141 VFPYLVQKKHKEGQEIRRVAQCCWNIIADDCNLPF---SASG-LKFIPLPVMHGEDYICL 196 Query: 175 GFRFGN---VAYCTDVNAFPAE-----SLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLK 225 GF FG VAY +DV+ PA S LD LI+D L K G H+ HF L ++L+ Sbjct: 197 GFLFGEKDRVAYISDVSRIPASTEYVISKSGAGQLDLLILDTLKKTGSHNVHFCLPQALE 256 Query: 226 KIELINPKNAILTHMHVDLDY 246 ++ + PK +L M + D+ Sbjct: 257 TVKRLCPKQTLLIGMTHEFDH 277 >gi|320166018|gb|EFW42917.1| metallo-beta-lactamase [Capsaspora owczarzaki ATCC 30864] Length = 426 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +S + + +++D G FY +R + I AV+ TH HAD + +D LR + Sbjct: 95 LSAAAAKSHVRNIVIDVGKSFYEGAIRWFLDYGITDIHAVVLTHEHADAVLRLDDLRDWT 154 Query: 100 L-KQKRP-IDVYAAPDCMKHLFESFRYCF---KALDDRTYPPIVNPIVIENNDVPICMKS 154 + + +P + V+ P M + F Y KA P I + + P + Sbjct: 155 MYRDDQPSLPVFLDPPTMAAVSRLFPYMVDETKATGSGLVPKI--KFCVFDPTQPFNVLG 212 Query: 155 AGGVIEAIPILQQHGR-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 +E P + HG+ +SLGFRF NV Y +DV+ ++ E + D I+D LK Sbjct: 213 ----VEFAPFVVPHGKNCTSLGFRFSNVTYLSDVSDLDEKAYEWIDGSDIFIVDTLKEVS 268 Query: 214 HSSHFSLSESLKKIELIN--PKNAILTHM 240 H SHF L E+L E I P+ LT M Sbjct: 269 HVSHFGLDEALAASERIRPAPRQVYLTGM 297 >gi|19075752|ref|NP_588252.1| hydrolase (predicted) [Schizosaccharomyces pombe 972h-] gi|74626870|sp|O74545|YCV6_SCHPO RecName: Full=Putative hydrolase C777.06c gi|3560243|emb|CAA20710.1| hydrolase (predicted) [Schizosaccharomyces pombe] Length = 301 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 40/290 (13%) Query: 9 ILGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSN-TTVI 57 +G G S G+P + T + C P KN R +S+ + G ++ Sbjct: 10 FMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRPKNIL 69 Query: 58 VDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAP 112 +D G FY+ L+ ++ +DAV+ TH HAD I+G+D LR + L +P + +Y Sbjct: 70 IDCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKIYLTE 129 Query: 113 DCMKHLFESFRYCFKA-----------LDDRTYPPIVNPIVIENNDV---PICMKSAGGV 158 K + SF Y A D + P P +++ D+ P+ + Sbjct: 130 RTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPD-KPFKLDDIDISVTPLPVHHGVYF 188 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 IE ++ +GFR G+++Y +D N P + + ++ + +++DALK+ + SHF Sbjct: 189 IEG----KESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPSHF 244 Query: 219 SLSESLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRVV---PAFDG 263 S ++ + I + P + T ++++ +K V PA+DG Sbjct: 245 SFKQAEEFIASLEHVPSRVLYTGFSHKVEHNETVKELSVLKVPTEPAYDG 294 >gi|91773893|ref|YP_566585.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242] gi|91712908|gb|ABE52835.1| protein with beta-lactamase-like domain [Methanococcoides burtonii DSM 6242] Length = 248 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 26/265 (9%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G + G P I D C + R I S+ G V++DT PD Sbjct: 3 ITLLGTGDAPGTPIIGCDCPTCIDATKGTKSNRLRFSILIESDEGK---VLIDTSPDMRE 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LR+ + ID V++TH H DH G G F + + +DVY + + ++ + + Sbjct: 60 QMLRKGLKHIDGVIWTHGHYDHYTGF----GEFHRVQYNVDVYGVTETLDYILDYVSFL- 114 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P + I + + I ++ + P + G + G + ++ TD Sbjct: 115 --------RPKRHDIPLNTSFELIGLEFTLFEVNHPPAKKAVGVMICEGDKKVVISGDTD 166 Query: 187 VNAFPAESLEKLQNLDFLIIDAL---KNGLH-SSHFSLSESLKKIELINPKNAILTHM-H 241 N P +S+E +Q+ D I+DA+ G H H E+++ E IN K ++TH+ H Sbjct: 167 EN-IPEKSIEIIQSPDIFIVDAIIPHDVGFHVKKHMDAKEAMEIAEKINAKRVVMTHISH 225 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 +D +K+ P +DGM+ Sbjct: 226 YFKPHDEAVKTYPL----GYDGMEL 246 >gi|297845964|ref|XP_002890863.1| hypothetical protein ARALYDRAFT_473254 [Arabidopsis lyrata subsp. lyrata] gi|297336705|gb|EFH67122.1| hypothetical protein ARALYDRAFT_473254 [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 35/257 (13%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL +P P N R +SL I G + + +D G F QVLR Sbjct: 49 CSQSLSIP----------PEKNPNYRGNTSLLIDYCQIDGKHKYIQIDVGKTFREQVLRW 98 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD + G+D +R P ++ + M L F Sbjct: 99 FTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAMDSLAVKFP 158 Query: 124 YCF-KALDD----RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y K L + R + I+ E+ + P ++G +P++ + LGF F Sbjct: 159 YLVQKKLKEGQEVRRVAQLDWRIIEEDCEKPFV--ASGLSFTPLPVMHGEDYV-CLGFLF 215 Query: 179 GN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIEL 229 G VAY +DV+ FP + + LD LI+D L K G H++H ++L I+ Sbjct: 216 GEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLILDTLYKTGSHNTHLCFPQTLDTIKR 275 Query: 230 INPKNAILTHMHVDLDY 246 ++PK A+L M + ++ Sbjct: 276 LSPKRALLIGMTHEFEH 292 >gi|218187251|gb|EEC69678.1| hypothetical protein OsI_39116 [Oryza sativa Indica Group] Length = 337 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 33/256 (12%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL VP P N R +SL I + ++ +++D G F QVLR Sbjct: 57 CSQSLSVP----------PELNPNYRCNTSLLIDYCQDEVAHKYILIDVGKTFREQVLRW 106 Query: 71 ---EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFR 123 ++ +D+++ TH HAD I G+D +R P +Y + M + + F Sbjct: 107 FIHHKIPGVDSIILTHEHADAILGLDDVRIVQPFSPTNDIEPTPIYLSQFAMDSIAQKFP 166 Query: 124 YC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y K ++ ++ VIE++ + S G + +P++ + LGF FG Sbjct: 167 YLVRKKLKEGEEVRRVAQLDWRVIESDLQKPFVTSGLGFV-PLPVIHGEDYV-CLGFLFG 224 Query: 180 ---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSESLKKIELI 230 VAY +DV+ FP + + LD LI+D L + G H+ H ++L ++ I Sbjct: 225 RKSKVAYISDVSRFPPSTEHAISKSGEGQLDLLILDCLYRTGSHNVHLCWDQTLDAVKRI 284 Query: 231 NPKNAILTHMHVDLDY 246 PK A+L M ++D+ Sbjct: 285 CPKRALLIGMTHEMDH 300 >gi|327401831|ref|YP_004342670.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317339|gb|AEA47955.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 257 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 34/241 (14%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G S G P I C+ R R S+ I + T+++DT PD Q Sbjct: 5 LLGTGDSPGTPVIGCHCKTCENARKHGWERKRFSVMI-----QNKGKTLLIDTSPDMRAQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC-F 126 +LR V +DAV++TH H DH G G F + + + VY++P+ + + + + + Sbjct: 60 LLRADVERVDAVIWTHCHYDHFSGF----GDFYRVQSNVVVYSSPEVHEDIGKYMEFIKY 115 Query: 127 KALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 K ++ +Y P+ + +I+ N P+ +S G V+E G++ VA Sbjct: 116 KPVEVESYEPLDLFGMKVTLIDVNHPPL-RRSHGVVVECD------------GYK---VA 159 Query: 183 YCTDVN-AFPAESLEKLQNLDFLIIDAL--KNGLHSSHFSLSESLKKIELINPKNAILTH 239 D N P++SL ++ N D I++AL + H + E+L + I K +LTH Sbjct: 160 ISGDTNREVPSKSLAEMYNADLFIVEALAPEGYRFRKHMNAVEALSLAKNIGAKRTVLTH 219 Query: 240 M 240 + Sbjct: 220 L 220 >gi|251796652|ref|YP_003011383.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247544278|gb|ACT01297.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 260 Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 39/276 (14%) Query: 8 TILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G G ++GVPR+ D C T NRR R+ +++ + T+++D GPD+ Sbjct: 5 TFRGTGDAMGVPRVYCDCEVCSEARTGGANRRYRALVQL----DSPDFGTMMIDCGPDWG 60 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGI----DGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 Q+ + ++ +L TH H DHI G+ D R +K + YA + + + + Sbjct: 61 KQMESAGLRFVNRILVTHAHFDHIGGLPEWADACRWLGVKG----EAYAPSEVIAEILQR 116 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--GVIEAIPILQQHGRISSLGFRFG 179 F + + + + PI P N +V + G G A Q++ S Sbjct: 117 FPWLGRNI---AFVPIDQPCTFGNWEVLAWKVNHGKNGYAYAFRFDQKNSGTS------- 166 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH---SSHFSLSESLKKIELINPKN 234 AYC+D E + L LD L++ K S + ++E+L+ + + PK Sbjct: 167 -WAYCSDSIGLTGEQQKPLFGLDLLVLGTSFYKENFRYETRSVYDVTEALELLPVWGPKK 225 Query: 235 AILTHMHVDLDYDMVLKST---PSRVVPAFDGMQFS 267 + THM D+D L+ T PS A GM+ S Sbjct: 226 TLFTHMSHDID----LRKTYPMPSYAEFALTGMEVS 257 >gi|94985686|ref|YP_605050.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94555967|gb|ABF45881.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 267 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 114/271 (42%), Gaps = 22/271 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVS-ERGSNTTVIVDTGPD 63 T LG S GVPR D C T+ NRRTRS+ + G T+++D GPD Sbjct: 5 LTFLGSADSKGVPRFWCDCPVCAEARTSGVNRRTRSAALVRGAEPSTGELQTLLLDCGPD 64 Query: 64 FYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + Q+ R L DAVL +H H DH+ G+ L Y + VYA + + + F Sbjct: 65 LHAQLARLPGPLVPDAVLISHAHNDHVLGLGDLLDYVGYAGERLHVYAPAAVIPDIQDRF 124 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 RY F R+ P V P+ E +V A V R+ GF A Sbjct: 125 RYAF-----RSAAP-VWPLPEEGLEVAGLRVRAFRVPHGANGHSHAFRLDRPGF---AAA 175 Query: 183 YCTDVNAFPAESLEK-LQNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD PAE + + L NLD LI+ ++ S + + E+L + Sbjct: 176 YVTDAIDIPAEVIGRWLTNLDLLILGTSFADESRVPHAGRSVYDVREALALPWAQAVRRV 235 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTH+ D+ D+ + P A DG++ Sbjct: 236 FLTHLSHDV--DVRTRPLPRNWSWAHDGLEL 264 >gi|73668074|ref|YP_304089.1| ATP-binding protein PhnP [Methanosarcina barkeri str. Fusaro] gi|72395236|gb|AAZ69509.1| ATP-binding protein PhnP [Methanosarcina barkeri str. Fusaro] Length = 246 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 21/237 (8%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G ++G P+I + AC+ + R I S++G +++DT PD Sbjct: 3 LTLLGTGDAVGTPKIGCNCPACEDARKGGKSQRLRFSILVESDKGK---ILIDTSPDLRQ 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q L++ + +D V++TH H DH G G F + + +DVY + ++++ + Y + Sbjct: 60 QFLKQNLSCVDGVIWTHGHYDHYSGF----GEFYRVQNKVDVYGVQENIEYINQ---YVY 112 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 Y + P + I ++ + P+ G I G + V D Sbjct: 113 FLKPRYHYVKLYEPFDL------IGLQFTLFKVNHPPVEVPTGVIIREGDK--KVVITGD 164 Query: 187 VNA-FPAESLEKLQNLDFLIIDAL--KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 N+ P SLE ++N D LI DA+ N H + E++ E +N K L H+ Sbjct: 165 TNSEIPEASLELMENPDLLIADAIVPPNIHIKKHMNSEEAMALAEQLNAKKIALIHL 221 >gi|307352743|ref|YP_003893794.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307155976|gb|ADN35356.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] Length = 239 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 27/238 (11%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG G ++G PR+ D G C + R R R+S I G+N +++DT PD Sbjct: 4 TILGTGDTVGTPRVGCDCGVCTLATEEGRSRLRTSFLIEN---EGNN--ILIDTSPDLKE 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC- 125 Q++R I AVL+TH H DHI G + ++ Q P Y M + F + Sbjct: 59 QLIRTGAPKIGAVLWTHAHYDHIAGFNE---FYRVQDFP-PAYTPEKVMNDISGFFHFLR 114 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 FK Y P++ + V P + +G + + + + Y + Sbjct: 115 FKKNIVEPYEPLI-----------LFGMEITFVTVNHPPIDTYGIV--IRYNGKKIGYTS 161 Query: 186 DVNA-FPAESLEKLQNLDFLIIDALK-NGLH-SSHFSLSESLKKIELINPKNAILTHM 240 D N P ++E+L N D L +DAL +H H +++E+ + ++PK HM Sbjct: 162 DTNPNIPERTVEELMNCDLLFLDALMLPDVHIGKHMNIAEAEDLAQKLSPKEYYFVHM 219 >gi|304404461|ref|ZP_07386122.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304346268|gb|EFM12101.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 258 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 108/278 (38%), Gaps = 45/278 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G G S+GVPR+ D C +NRR RSSL+I E + +D GPD+ Sbjct: 4 LTFAGTGDSMGVPRVYCDCEVCQEARESGENRRYRSSLRI----EDQTFGCTWIDCGPDW 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+ D +L TH H DHI G+ R YA + + + F + Sbjct: 60 GKQMEAAGQRFPDRILITHAHFDHIGGMVEWADACRWLGRRGMAYAPNEVIAEILNRFPW 119 Query: 125 CFKALDDRTYPPIVNPIVIENNDV---PICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 +D + P+ + I I + V +C G S FRF Sbjct: 120 LGNQID---FHPLDDGITIGDWSVFAWKVCHGKNG---------------YSYAFRFDQQ 161 Query: 181 -----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS--------ESLKKI 227 AYC+D A + ++ L+ LD LI L + F S E+L + Sbjct: 162 CTGKAWAYCSDAIALTEDQIKPLRGLDLLI---LGTSFYEEPFEFSTRSLYDVKEALTLV 218 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 E + P TH+ D+D PS++ A GMQ Sbjct: 219 EDLRPVQTCFTHLSHDIDLRRSY-GLPSQIRFARTGMQ 255 >gi|147854386|emb|CAN79104.1| hypothetical protein VITISV_006256 [Vitis vinifera] Length = 377 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 119/301 (39%), Gaps = 85/301 (28%) Query: 10 LGCGASLGVPRI---TGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 LG G S G+PR+ T C DP++ KNRR +S+ I S G T+++D Sbjct: 73 LGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSS-KNRRLNTSILIRYPSSSG-GCTILID 130 Query: 60 TGPDFYMQVLRE------------------------------------------------ 71 G FY LR Sbjct: 131 VGKFFYHSALRWFPTFGLLVDYLNFDDNTDVFIAFLTVILFYCFVFHHMYLPFVTSCISV 190 Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 ++ +IDAV+ TH HAD I G+D LR + + I +Y AP FE + L D Sbjct: 191 RIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAP----RDFEVMKKTHYYLVD 246 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHG-RISSLGFRFGNVAYCTDVN 188 + I+ + I + V ++ IP+ HG SLGFRFGN+ Y +DV+ Sbjct: 247 TSV--IIPGAAVSELQFNIIHEEPFIVHDLKVIPLPVWHGPGYRSLGFRFGNICYISDVS 304 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P E+ L+N + L++ +L ++ I PK + T M +D++ Sbjct: 305 EIPEETYPLLKNCEILVL----------------ALDEVRKIQPKRTLFTGMMHLMDHEK 348 Query: 249 V 249 V Sbjct: 349 V 349 >gi|20092858|ref|NP_618933.1| ATP-binding protein PhnP [Methanosarcina acetivorans C2A] gi|19918162|gb|AAM07413.1| ATP-binding protein PhnP [Methanosarcina acetivorans C2A] Length = 246 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 57/255 (22%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G ++G P+I + AC + R I S++G +++DT PD Sbjct: 3 LTLLGTGDAVGTPKIGCNCPACADARKGGKSQRLRFSILVESDQGK---ILIDTSPDLRQ 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL--FESF-- 122 Q LR+++ ID V++TH H DH G G F + + +DVY + + ++ + SF Sbjct: 60 QFLRQRLSGIDGVIWTHGHYDHYAGF----GEFYRVQNKVDVYGIQETLDYIDRYVSFLK 115 Query: 123 -RYCFKALDD-------------RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 RY + L + ++PP+ NP AG VI ++ Sbjct: 116 PRYHYVKLYEPFDLIGLEFTLFKVSHPPVENP--------------AGVVI------REG 155 Query: 169 GRISSLGFRFGNVAYCTDVNA-FPAESLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESLK 225 G V D N P +SLE +++ D LI DA+ +H H + E++ Sbjct: 156 GT---------KVVITGDTNPDIPEKSLELMKDPDLLIADAIVPPHIHIKKHMNSEEAMA 206 Query: 226 KIELINPKNAILTHM 240 + ++ K +LTH+ Sbjct: 207 LAQKLDAKKVVLTHL 221 >gi|240255743|ref|NP_192270.4| unknown protein [Arabidopsis thaliana] Length = 303 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 45/264 (17%) Query: 32 NPKNRRTRSSLKISRVS--ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHI 89 NP N R +SL I S E G + +++D G F REQ++ TH HAD + Sbjct: 52 NP-NYRCNTSLLIDYCSKEEDGRHKYILIDVGKSF-----REQII------LTHEHADAV 99 Query: 90 HGIDGLR-----GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--- 141 HG+D +R G + P+ V+ + M+ + F Y + + P V+ + Sbjct: 100 HGLDEIRSLQPRGATIVDTDPLPVFLSQFTMESIATRFPYLVEK-KVKEVPRRVSLLDWK 158 Query: 142 -VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---VAYCTDVNAFP-----A 192 + EN D P ++G +P++ I+ LGF FG+ VAY +DV+ P A Sbjct: 159 NIEENCDEP--FAASGLSFTPLPVMHGEDYIA-LGFLFGDKSKVAYISDVSRIPPSTEYA 215 Query: 193 ESLEKLQNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD---Y 246 S LD LI+D K G H +H +E+L+ ++ + PK A+LT M + D Y Sbjct: 216 ISKAGAGQLDLLILDTNIPWKRGPHPTHICFTEALEILKRLCPKRALLTGMTHEFDHHEY 275 Query: 247 DMVLKSTPSR----VVPAFDGMQF 266 + +L R V A DG++ Sbjct: 276 NEILAEWSLREGIHVQLAHDGLRL 299 >gi|170085423|ref|XP_001873935.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651487|gb|EDR15727.1| predicted protein [Laccaria bicolor S238N-H82] Length = 357 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 34/254 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPH 85 P KN R +S I + G TV++D G +F L + Q+ IDA+L TH H Sbjct: 47 PEGKKNIRRNTSATIRMADKNGLPVTVVIDAGKNFQAAALEWFPKYQLRRIDALLITHAH 106 Query: 86 ADHIHGIDGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPP-- 136 AD ++G+D LRG+ L+ + IDVY + D + SF Y D + P Sbjct: 107 ADAMNGLDDLRGWTLRSAIQDHIDVYVSQDTFTEVQRSFPYLVAKEFASGGGDESVPEFK 166 Query: 137 ---IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-----------SLGFRFGN-V 181 I + + E + I + G + I I HGR+ S GF+ N + Sbjct: 167 WHIISDSVSFEIGNTGIHITPFAG--KFINISFHHGRVFSEGKETIYPYLSFGFKIQNHI 224 Query: 182 AYCTDVNAFPAESLEKLQNLD----FLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 Y +DV+ P ++ D ++D L+ H SH L+ S+ I L Sbjct: 225 VYISDVSHIPDNVWPMIEPSDGPIPVAVLDCLRLQPHPSHVGLAGSIALARRIKATKTYL 284 Query: 238 THMHVDLDYDMVLK 251 T ++ ++ +K Sbjct: 285 TGFGHEVSHEEYVK 298 >gi|4263048|gb|AAD15317.1| putative hydrolase [Arabidopsis thaliana] gi|7270684|emb|CAB77846.1| putative hydrolase [Arabidopsis thaliana] Length = 290 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 120/274 (43%), Gaps = 52/274 (18%) Query: 9 ILGCGASLGVPRITGDWGACDP--------------TNPKNRRTRSSLKISRVS--ERGS 52 LG G S VP DP NP N R +SL I S E G Sbjct: 15 FLGTGCSGAVPDFRCLLQPSDPPCHVCSQSLSLLPHLNP-NYRCNTSLLIDYCSKEEDGR 73 Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR-----GYFLKQKRPID 107 + +++D G F REQ++ TH HAD +HG+D +R G + P+ Sbjct: 74 HKYILIDVGKSF-----REQII------LTHEHADAVHGLDEIRSLQPRGATIVDTDPLP 122 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI----VIENNDVPICMKSAGGVIEAIP 163 V+ + M+ + F Y + + P V+ + + EN D P ++G +P Sbjct: 123 VFLSQFTMESIATRFPYLVEK-KVKEVPRRVSLLDWKNIEENCDEP--FAASGLSFTPLP 179 Query: 164 ILQQHGRISSLGFRFGN---VAYCTDVNAFP-----AESLEKLQNLDFLIIDA---LKNG 212 ++ I+ LGF FG+ VAY +DV+ P A S LD LI+D K G Sbjct: 180 VMHGEDYIA-LGFLFGDKSKVAYISDVSRIPPSTEYAISKAGAGQLDLLILDTNIPWKRG 238 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H +H +E+L+ ++ + PK A+LT M + D+ Sbjct: 239 PHPTHICFTEALEILKRLCPKRALLTGMTHEFDH 272 >gi|253576574|ref|ZP_04853902.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843988|gb|EES72008.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 260 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 105/268 (39%), Gaps = 27/268 (10%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G ++GVPR+ D C NRR R+ + + G ++D GPD+ Sbjct: 6 FIGTGDAMGVPRVYCDCEVCGEARSSGVNRRYRALVAVE-----GEEGGFLIDCGPDWRS 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + R + +L TH H DHI G+ R +YA + + + F + Sbjct: 61 GMERRGQRFAEQILITHAHFDHIGGLPEWADACRWLGRRGQLYAPQEVLDTILRQFPWLG 120 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 LD ++ + E + SA V R+ GF + AYC+D Sbjct: 121 SHLD-------LHAVGAEGTRLARWQISAWKVFHGKNGFSYAYRLEKDGFTW---AYCSD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A P + + L LD L++ S + + E+L+ + I P + TH+ Sbjct: 171 SIALPEDQKQPLFGLDLLVLGTSFYHETAEFTTRSVYDVKEALELLNEIRPTRTVFTHLS 230 Query: 242 --VDLDYDMVLKSTPSRVVPAFDGMQFS 267 +DL D L P V A GMQ S Sbjct: 231 HDIDLRRDYGL---PEGVEFAVTGMQMS 255 >gi|71663821|ref|XP_818898.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884175|gb|EAN97047.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 374 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 134/331 (40%), Gaps = 92/331 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNT--- 54 + TI+G G S GVP I G C D P NRR SL I+ S G ++ Sbjct: 9 FSLTIVGSGCSTGVPVIGHLSGNCACAVAMRDAEGP-NRRNNVSLLITVPSPHGGSSGDG 67 Query: 55 ----TVIVDTGPDF---YMQVL-REQVLSIDAVLYTHPHADHIHGIDGLR---------- 96 V++D G F Y +VL + QV ++DA+L TH H D + G+D +R Sbjct: 68 RGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDGH 127 Query: 97 -GYFLKQKRPIDVYAAPDCMKHLFESFRYCF---------------------KALDDRTY 134 +F+KQ P YA+ M L F Y + ++R Sbjct: 128 DNWFVKQYIP--TYASAKTMNALRCQFGYIHRNSRVMGFAPRTAEEHESIMQRVAEERER 185 Query: 135 PPIVNPI------------VIENNDVPICMKSAGGVIE--AIPILQQHGRISSLGFRFGN 180 + N I + ++ P C+ + G + A+P+ G + +LGF FG Sbjct: 186 AGLTNNIGTRRSTALELFTLPDDTPTPFCIPALGADFKFHAVPVEHGAGYV-ALGFVFGR 244 Query: 181 -------------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSS 216 V Y +DV+ PA ++ LQ+L D LI+D L + + Sbjct: 245 GVAFRSAGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYET 304 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYD 247 H+ + + +K + + P M+ D++++ Sbjct: 305 HYCMDDVIKLVASLQPTCTYTIGMYCDVEHE 335 >gi|71656370|ref|XP_816733.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70881881|gb|EAN94882.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 374 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 134/331 (40%), Gaps = 92/331 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNT--- 54 + TI+G G S GVP I G C D P NRR SL I+ S GS+ Sbjct: 9 FSLTIVGSGCSTGVPVIGHLSGNCACAVAMRDAEGP-NRRNNVSLLITVPSPHGSSNGDD 67 Query: 55 ----TVIVDTGPDF---YMQVL-REQVLSIDAVLYTHPHADHIHGIDGLR---------- 96 V++D G F Y +VL + QV ++DA+L TH H D + G+D +R Sbjct: 68 RGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDGH 127 Query: 97 -GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA---------------------LDDRTY 134 +F++Q P YA+ M L F Y + ++R Sbjct: 128 NNWFVEQYIP--TYASAKTMNALRCQFGYIHRNSRVMGPAPRTAEEHESIMQHFAEERER 185 Query: 135 PPIVNPI------------VIENNDVPICMKSAGGVIE--AIPILQQHGRISSLGFRFGN 180 + N I + ++ P C+ + G + A+P+ G + +LGF FG Sbjct: 186 AGLTNKIGTRRSTALELFTLPDDTPTPFCIPALGADFKFHAVPVEHGAGYV-ALGFVFGR 244 Query: 181 -------------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSS 216 V Y +DV+ PA ++ LQ+L D LI+D L + + Sbjct: 245 GVAFRSAGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYET 304 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYD 247 H+ + + +K + + P M+ D++++ Sbjct: 305 HYCMDDVIKLVASLQPTCTYTIGMYCDVEHE 335 >gi|255635092|gb|ACU17904.1| unknown [Glycine max] Length = 322 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 41/275 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNP-------------KNRRTRSSLKI---SRVSERGSN 53 LG G S VP + DP P N R +SL I + + G Sbjct: 20 LGTGCSSMVPNLMCLLQPSDPPCPVCVQSLSIPPERNPNYRCNTSLLIDYGAAAANGGDR 79 Query: 54 TTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRP 105 +++D G F VLR ++ ID+++ TH HAD + G+D +R P Sbjct: 80 KYILIDVGKTFRETVLRWFVAHRIPRIDSIILTHEHADAVLGLDDIRAVQAFSPTNDIDP 139 Query: 106 IDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + M + E F Y + + R I I+ + D ++G Sbjct: 140 TPIYLSQHSMDSIAEKFPYLVQKKRKEGAEIRRVAQIDWNIIAD--DCNQQFFASGLKFT 197 Query: 161 AIPILQQHGRISSLGFRFGN---VAYCTDVNAFPAE-----SLEKLQNLDFLIIDAL-KN 211 +P++ I LGF FG VAY +DV+ FPA S LD LI+D+L + Sbjct: 198 PLPVMHGEDYI-CLGFLFGEKNRVAYISDVSRFPASTEYVISKSGAGQLDLLILDSLYRT 256 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 G H+ H ++L+ ++ + PK +L M + D+ Sbjct: 257 GSHNVHLCFPQTLETVKRLCPKQTLLIGMTHEFDH 291 >gi|223992599|ref|XP_002285983.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977298|gb|EED95624.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 309 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 68/299 (22%) Query: 29 DPTNPKNRRTRSSLKI-----SRVSERGSN-------TTVIVDTGPDFYMQVLR----EQ 72 DP K+ R SL I V +GS+ VI+D G F LR Sbjct: 12 DPKLNKDYRGNPSLMIVHKNNDTVDGKGSSGDKETKLQNVIIDVGKTFTENALRWMPQHG 71 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFL----------KQKRPIDVYAAPDCMKHLFESF 122 SIDAV+ TH H D I G+D LRG+ + Q+ P+ V+++ C++ L F Sbjct: 72 KTSIDAVVLTHEHMDAIAGLDDLRGFQMLPTKDPKTGYPQQTPLPVFSSKLCLEVLKRQF 131 Query: 123 RYCFKALDD---------------RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 Y F D R Y ++ V+E+ P +AG + +P+ Sbjct: 132 FYLFPKEDGGSSAGETTLADGSKIRRYVSKLDFRVVESFK-PFV--AAG--LRMVPLPVM 186 Query: 168 HGR-ISSLGFRFG-----------NVAYCTDVNAFPAES----LEKLQNLDFLIIDALK- 210 HG + G+ F NV Y +D++ PAE+ +E+L +D L++D+L Sbjct: 187 HGEDLVCNGYAFSVDGGKSGNKTLNVVYLSDISRMPAETERFIMEELPPIDVLVVDSLNL 246 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGM 264 + + +H++ E+LK + + P+ + M DL + + L ++ A+DG+ Sbjct: 247 SNPNPTHYTFEEALKLVRKLKPERTFVVGMSCDLFLPHHEMNKQLAELDIKIELAYDGL 305 >gi|21226955|ref|NP_632877.1| hypothetical protein MM_0853 [Methanosarcina mazei Go1] gi|20905267|gb|AAM30549.1| conserved protein [Methanosarcina mazei Go1] Length = 246 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 59/256 (23%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G ++G P+I + AC T+ + L+ S + E G +++DT PD Sbjct: 3 LTLLGTGDAVGTPKIGCNCPAC--TDAREGGKSQRLRFSILVESGQGK-ILIDTSPDLRQ 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL--FESF-- 122 Q LR+++ IDAV++TH H DH G G F + + +DVY + + ++ + SF Sbjct: 60 QFLRQKLSGIDAVIWTHGHYDHYAGF----GEFYRVQNKVDVYGVCETLDYIDQYVSFLK 115 Query: 123 -RYCFKALDD-------------RTYPPIVNP--IVIENNDVPICMKSAGGVIEAIPILQ 166 RY + L + +PP+ P +VI + D + + Sbjct: 116 PRYHYVKLYEPFELIGLEFTLFKVHHPPVEVPTGVVIRDGDTKVVVT------------- 162 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESL 224 G+ + P SLE +++ D LI DA+ +H H + E++ Sbjct: 163 ------------GDTS-----PDIPENSLELMKDPDLLIADAIVPPHIHIKKHMNSEEAM 205 Query: 225 KKIELINPKNAILTHM 240 + +N K +LTH+ Sbjct: 206 ALAQKLNAKEVVLTHL 221 >gi|226498240|ref|NP_001144639.1| hypothetical protein LOC100277658 [Zea mays] gi|195644950|gb|ACG41943.1| hypothetical protein [Zea mays] Length = 347 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 121/275 (44%), Gaps = 50/275 (18%) Query: 7 FTILGCGASLGVPRI-----TGDWGACD------PTNPKNRRTRSSLKISRVSERGSNTT 55 F GC SL R T G C P N R +SL I + ++ Sbjct: 45 FLGTGCSGSLPDTRCLLKPSTPPCGVCSMGVSLPPERNPNYRLNTSLLIDYCHDE-THKY 103 Query: 56 VIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PID 107 +++D G F QVLR +V S+++++ TH HAD + G+D + + R I Sbjct: 104 ILIDIGKTFREQVLRWFVHHKVPSVNSIILTHEHADAVLGLDEVWVVQPRNGRNDIEQIP 163 Query: 108 VYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++ M + F Y + D+ ++ +IE+ DV ++G +P Sbjct: 164 IFLTQFTMDSIARRFPYLMEQKPEDGDEDAQAAKIDWKIIED-DVDKPFVASGLEFVPLP 222 Query: 164 ILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKLQN---------LDFLIIDALKN 211 ++ G I LGF FG VAY +DV+ F L K +N LD LI++A N Sbjct: 223 VMHGEGYIC-LGFLFGRRARVAYLSDVSRF----LPKTENVISKSGAGQLDLLILEA--N 275 Query: 212 GLH------SSHFSLSESLKKIELINPKNAILTHM 240 LH S+H +LSESL I+ I PK A+L M Sbjct: 276 ALHGVGDSFSTHLTLSESLDAIKRIRPKQALLIGM 310 >gi|194707044|gb|ACF87606.1| unknown [Zea mays] Length = 347 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 121/275 (44%), Gaps = 50/275 (18%) Query: 7 FTILGCGASLGVPRI-----TGDWGACD------PTNPKNRRTRSSLKISRVSERGSNTT 55 F GC SL R T G C P N R +SL I + ++ Sbjct: 45 FLGTGCSGSLPDTRCLLKPSTPPCGVCSMGVSLPPERNPNYRLNTSLLIDYCHDE-THKY 103 Query: 56 VIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PID 107 +++D G F QVLR +V S+++++ TH HAD + G+D + + R I Sbjct: 104 ILIDIGKTFREQVLRWFVHHKVPSVNSIILTHEHADAVLGLDEVWVVQPRNGRNDIEQIP 163 Query: 108 VYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++ M + F Y + D+ ++ +IE+ DV ++G +P Sbjct: 164 IFLTQFTMDSIARRFPYLMEQKPEDGDEDAQAAKIDWKIIED-DVDKPFVASGLEFVPLP 222 Query: 164 ILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKLQN---------LDFLIIDALKN 211 ++ G I LGF FG VAY +DV+ F L K +N LD LI++A N Sbjct: 223 VMHGEGYIC-LGFLFGRRARVAYLSDVSRF----LPKTENVISKSGAGQLDLLILEA--N 275 Query: 212 GLH------SSHFSLSESLKKIELINPKNAILTHM 240 LH S+H +LSESL I+ I PK A+L M Sbjct: 276 ALHGVGDSSSTHLTLSESLDAIKRIRPKQALLIGM 310 >gi|322829725|gb|EFZ33019.1| hypothetical protein TCSYLVIO_619 [Trypanosoma cruzi] Length = 371 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 132/330 (40%), Gaps = 90/330 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSNT--- 54 + TI+G G S GVP I G C D P NRR SL I+ S G + Sbjct: 6 FSLTIVGSGCSTGVPVIGHLSGNCACAEAMRDAEGP-NRRNNVSLLITVPSPHGGSNGDG 64 Query: 55 ----TVIVDTGPDF---YMQVL-REQVLSIDAVLYTHPHADHIHGIDGLR---------- 96 V++D G F Y +VL + QV ++DA+L TH H D + G+D +R Sbjct: 65 RGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDGH 124 Query: 97 -GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA---------------------LDDRTY 134 +F++Q P YA+ M L F Y + ++R Sbjct: 125 DNWFVEQYIP--TYASAKTMNALRCQFGYIHRNSRVMGPAPRTAEEHESIMQHFAEERER 182 Query: 135 PPIVNPI------------VIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN- 180 + N I + ++ P C+ + G + + +HG ++LGF FG Sbjct: 183 AGLTNKIGTRRSTALELFTLPDDTPTPFCIPALGADFKFYAVPVEHGAGYTALGFVFGRG 242 Query: 181 ------------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSH 217 V Y +DV+ PA ++ LQ+L D LI+D L + +H Sbjct: 243 VAFRSVGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYETH 302 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYD 247 + + + +K + + P M+ D++++ Sbjct: 303 YCMDDVIKLVASLQPNCTYTIGMYCDVEHE 332 >gi|325190433|emb|CCA24935.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 340 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 49/303 (16%) Query: 9 ILGCGASLGVPR----ITGDWGACDPT--NPK--NRRTRSSLKISRVSERGSNTTVIVDT 60 +LGCG S VP ++ + C NP N R S+ I RV +++D Sbjct: 42 VLGCGPSSSVPSMRCLLSSECNVCKEAYENPTSMNHRLNPSILI-RVKSGNGTRNILIDC 100 Query: 61 GPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPID------- 107 G F LR Q+ +IDA++ TH HAD + G+D LR F + PI Sbjct: 101 GKTFRQAALRLFPKLQIDTIDAIILTHDHADAVLGLDDLREVQPFRVEIDPITKESCNVS 160 Query: 108 -----VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 V+ + + + F Y ++ + T V I I G + Sbjct: 161 SGALPVFCNEETQQGIETKFPYLCQS--ENTSARWVAQINFSLFQPLIPFSVCGYDFVPL 218 Query: 163 PILQQHG-RISSLGFRFG-----NVAYCTDVNAFPAESL----EKLQNLDFLIIDALKNG 212 P+L HG + G+ FG Y +DV+ P +++ E+ +++DFL+IDAL Sbjct: 219 PVL--HGDDYYAFGYVFGFEVNKCFVYISDVSHVPPQTMQYLVERKESIDFLMIDALNTE 276 Query: 213 -LHSSHFSLSESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPS----RVVPAFDGM 264 H++H +L + + + PK LT M D DY + V++ P +V A+DG+ Sbjct: 277 RRHNTHMNLPAVINLVLELRPKQTYLTGMSHDFDYNKTNAVIRDLPKLDNLKVEMAYDGL 336 Query: 265 QFS 267 S Sbjct: 337 FIS 339 >gi|68067116|ref|XP_675528.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494765|emb|CAH96592.1| conserved hypothetical protein [Plasmodium berghei] Length = 388 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/285 (26%), Positives = 116/285 (40%), Gaps = 74/285 (25%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPH 85 N KN+R S+ + + +N+ V++D G F +L ++++AVL TH H Sbjct: 90 NSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILLNNDKINFSEINLEAVLITHSH 144 Query: 86 ADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKA-LDDR 132 D ++GID LR Y+ K K+PIDVY L F Y K ++R Sbjct: 145 TDAMNGIDDLRDLQEYERVSYEDIYYYKSKKPIDVYLNDVSYYRLKNGFEYLAKERTENR 204 Query: 133 TYPPIV------------NPIVIENNDV------------------PICMKSAGGVIEA- 161 Y + N ++ ENN + K G I Sbjct: 205 FYSKVAALNFFILKDVKYNNLIHENNKLDEIKDVNNINNKKCINIHSYDKKDEYGFIYTT 264 Query: 162 ---------IPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPA---ESLEKLQNLDFLI 205 IP QHG+ +G+ GN + Y +D N E ++K +D L+ Sbjct: 265 FEKDKKIRFIPF--QHGKNYVCVGYIVGNNHKLVYISDCNYVSNSVIEYIKKFAPIDILV 322 Query: 206 IDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 IDAL H SHFS+ ES++ LI PK M D+++++ Sbjct: 323 IDALYYKSKHYSHFSMYESIQFSLLIKPKQVYFVGMSCDVEHNIT 367 >gi|326429872|gb|EGD75442.1| hypothetical protein PTSG_06517 [Salpingoeca sp. ATCC 50818] Length = 374 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 128/314 (40%), Gaps = 73/314 (23%) Query: 7 FTILGCGASLGVP------RITG-DWGACDPT--NPKNRRTR--------------SSLK 43 +LG GAS VP R G + C NP +R R S+L Sbjct: 30 LVLLGTGASSSVPNLACLIRTEGPECTVCQEAARNPLSRNLRGNPSMLIQYQPSLTSNLD 89 Query: 44 ISRVSERGSN--TTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 + RV + ++ D G F V R V IDA++ +H HAD + GID LR Sbjct: 90 LVRVGNADDDGVKNILFDAGKTFASAVARFFPKLGVTGIDALVISHDHADAVLGIDDLRS 149 Query: 98 -YFL-------------KQKRPIDVYAAPDCMKHLFESFRYCF----------------- 126 ++L + +PI+ + + + + + S C Sbjct: 150 VHYLTPYEDEKAGRTKYEVAKPIEAFCSDETFERMQGSVNVCLPSTSAVFPYLIPKKQIE 209 Query: 127 --KALDDRTYPPIVNPIVIEN---NDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG- 179 A + + + +N V+ N D+ + + +E P+ H G LGF FG Sbjct: 210 AINAGEPKRFVSRINWHVVANLSDRDIDVDPPFSVFGLELQPVRMMHGGSYICLGFLFGP 269 Query: 180 ---NVAYCTDVNAFPAESLEKL--QNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPK 233 +AY +DV FP +++ L N+D +IID+L + H +H L+E ++ + + PK Sbjct: 270 KDARIAYLSDVKVFPKPTMDLLLEANIDLMIIDSLYISEEHDTHMCLTEVVQVVRRVKPK 329 Query: 234 NAILTHMHVDLDYD 247 +L M D DY+ Sbjct: 330 RTVLVGMTHDFDYN 343 >gi|82540827|ref|XP_724702.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479436|gb|EAA16267.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 425 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 116/292 (39%), Gaps = 84/292 (28%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPH 85 N KN+R S+ + + +N+ V++D G F +L ++++AVL TH H Sbjct: 115 NSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILFNNDKINFSEINLEAVLITHSH 169 Query: 86 ADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYC-------- 125 D ++GID LR Y+ + K+PIDVY L F Y Sbjct: 170 TDAMNGIDDLRDLQEYERVSYEDIYYYRCKKPIDVYLNGVSYDRLRNGFEYIAKERTENR 229 Query: 126 ---------FKALDDRTYPPIVNP--------------IVIENNDVPICM-------KSA 155 F L D Y +VN V ENN C+ K Sbjct: 230 FYSKVAALNFYILKDIKYNSLVNENSENSENKENSENKNVSENNK---CINIHSYDKKDE 286 Query: 156 GGV----------IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPA---ESLEKL 198 G I IP QHG+ +G+ GN + Y +D N E ++K Sbjct: 287 HGFTYTTFENDKKIRFIPF--QHGKNYVCVGYIVGNNHKLVYISDCNYVSNSVIEYIKKF 344 Query: 199 QNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 +D L+IDAL H SHFS+ ES++ LI PK M D+++++ Sbjct: 345 SPIDILVIDALYYKSKHYSHFSMYESIQFALLIKPKQVYFVGMSCDVEHNIT 396 >gi|301122785|ref|XP_002909119.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099881|gb|EEY57933.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 312 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 54/285 (18%) Query: 9 ILGCGASLGVPR----ITGDWGACDPT--NP--KNRRTRSSLKISRVSERGSNTTVIVDT 60 +LGCG S VP ++ C NP KNRR SL + ++ ++ V++D Sbjct: 5 VLGCGPSSSVPSMRCVLSKHCAVCHEAHANPDSKNRRLNPSLLVRNLN---TDKNVLIDC 61 Query: 61 GPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPI--DVYA-A 111 G F LR V ++ +++ TH HAD + G+D LR ++ P+ ++Y Sbjct: 62 GKTFREAALRIFPQIGVSAVHSLVLTHDHADALLGMDDLREVQATVETVDPVTKELYKIP 121 Query: 112 PDCMK---------HLFESFRYCFKALDDRTYPP----IVNP------IVIENNDVPICM 152 P+ MK + F Y +D+ PP + P + I+ + Sbjct: 122 PEAMKVHCSEPTSHDVISKFPYL---IDNEPLPPPGETVPKPFRWTAKLQIDTFNPWEPF 178 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQN-----LD 202 + G P++ G +S GF FG Y +DV+ P E+ L + +D Sbjct: 179 VACGIKFLPFPVIHGAG-YTSFGFEFGYEVGARFVYISDVSEIPEETRSFLNDTSKPPVD 237 Query: 203 FLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L+IDAL + HS+H +L + +++I PK +LT M D DY Sbjct: 238 LLLIDALYLDKYHSTHMNLQKVMEEIATFKPKRTLLTGMSHDFDY 282 >gi|297813941|ref|XP_002874854.1| hypothetical protein ARALYDRAFT_911824 [Arabidopsis lyrata subsp. lyrata] gi|297320691|gb|EFH51113.1| hypothetical protein ARALYDRAFT_911824 [Arabidopsis lyrata subsp. lyrata] Length = 287 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPI 137 ++ TH HAD +HG+D +R + +D Y P + ES F L ++ + Sbjct: 74 IILTHEHADAVHGLDDIRS-LQPRGATMDTYPLPVFLSQFSMESIATRFPYLVEKKVKEV 132 Query: 138 VN-------PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDV 187 I+ EN D P ++G +P++ I+ LGF FG VAY +DV Sbjct: 133 PRRVSLLDWTIIEENCDKP--FTASGLSFTPLPVMHGEDYIA-LGFLFGGKSKVAYISDV 189 Query: 188 NAFP-----AESLEKLQNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + P A S LD LI+D K GLH +H E+L+ I+ + PK A+LT Sbjct: 190 SRIPPSTEYAISKAGAGQLDLLILDTNIPRKRGLHPTHICFPEALEIIKRLCPKRALLTG 249 Query: 240 MHVDLDY 246 M D D+ Sbjct: 250 MTHDFDH 256 >gi|116753510|ref|YP_842628.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116664961|gb|ABK13988.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 245 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 27/253 (10%) Query: 8 TILGCGASLGVPRITGDWGAC-DPTNP-KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G ++G P+I C D N ++RR R S+ + R V++DT PD Sbjct: 4 VMLGTGDAIGTPKIGCRCPTCVDALNGGRSRRLRFSILLENDEGR-----VLIDTSPDLR 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+++ + +DAV++TH H DH G G F + + + VYA + ++ S+ Y Sbjct: 59 WQLIKMGISKVDAVIWTHAHYDHYAGF----GDFHRVQNHVPVYATRSTLDYVI-SYLYF 113 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + P + P I + + + P ++ G + S G + V + Sbjct: 114 LRPQRHDVEP--LEPFEIAGMEFTLFEVNH-------PPVETMGVLVSAGGK--RVVITS 162 Query: 186 DVN-AFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILTHM-H 241 D N A ESL+ +++ D I DA+ + + H + E++ +N + +LTH+ H Sbjct: 163 DTNDALSEESLDIMRDADLFIADAIMPPGYKLNKHMNADEAISLAHRLNARQTVLTHLSH 222 Query: 242 VDLDYDMVLKSTP 254 + +D +K P Sbjct: 223 LYPPHDEAVKRWP 235 >gi|90580441|ref|ZP_01236247.1| Beta-lactamase-like protein [Vibrio angustum S14] gi|90438350|gb|EAS63535.1| Beta-lactamase-like protein [Vibrio angustum S14] Length = 255 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 45/274 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDP-TNPKNRRTRSSLKISRVSERGSNTTVIVDTG-PDF 64 T+LG GA+ GVP AC+ T+ N + + + + +++D G D Sbjct: 4 LTLLGTGAAGGVPLYGCHCSACEAATHDHNLERKPCSAMIEWGDEQNKKRLLIDAGIMDL 63 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLFES 121 + R V S L TH H DH+ G+ LR G + P D D +KH Sbjct: 64 HK---RFSVGSYIGFLLTHFHVDHVQGLFHLRWGNGALIPVWCPNDPLGCADLLKH---- 116 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 LD R+Y P +E ++ P+ QH + + G+ F Sbjct: 117 ----SGCLDFRSYLHHGVPFNVEG-------------LKITPLSMQHSK-PTFGYLFEFD 158 Query: 179 GN-VAYCTDVNAFPAESLEKL---QNLDFLIID-----ALKNGLHSSHFSLSESLKKIEL 229 GN VAY TD + P E+ + L LD L++D AL+ G HS + + E Sbjct: 159 GNTVAYLTDTDGLPLETEQYLLLVNKLDALVLDCSFPPALERGNHSD---IDTAFDVYER 215 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + PK I+TH+ +LD + PS +V DG Sbjct: 216 LLPKQFIITHIGHELDCWLQDNQVPSSLVIGCDG 249 >gi|329922131|ref|ZP_08277891.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|328942387|gb|EGG38653.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 259 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 108/272 (39%), Gaps = 38/272 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++GVPR+ D C NRR RSS+ + T+ ++D GPD+ Sbjct: 6 LTFLGTGDAMGVPRVYCDCEVCTEARSTGVNRRLRSSVMVE-----CGETSFMIDCGPDW 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + + +L TH H DHI G+ Q+ +YA + + + Sbjct: 61 RGMMEGLGIRKMSDMLITHAHFDHIGGLPEWSDACRWQREKGRLYAPAEVLDQIV----- 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGNVAY 183 R YP + P +E V AG I + HG+ S +RF Y Sbjct: 116 -------RQYPWL--PRQMEMTPVDEGFTLAGWEISCWKV--NHGKNGYSYAYRFQKDGY 164 Query: 184 CTDVNA----FPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINP 232 N+ E E L+ +D L++ + +H S + + E+ + + + P Sbjct: 165 TWVYNSDSIHLSLEEKEPLKGVDLLVLGT--SFVHETAQFETRSVYDMKEAAELLAEVKP 222 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 + + THM D+D L P V A GM Sbjct: 223 RQTVYTHMSHDVDVRKEL-PLPEGVRVAVAGM 253 >gi|125545042|gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group] Length = 885 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 53/286 (18%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL +P P N R +SL I G + +++D G F QVLR Sbjct: 35 CSHSLSLP----------PERNPNYRCNTSLLIDYCQHDGIHKYILIDVGKTFREQVLRW 84 Query: 71 ---EQVLSIDAVLYTHPHADHIHGID--------GLRGYFLKQKRPIDVYAAPDCMKHLF 119 ++ +D+++ TH HAD + G+D G R K + ++ M + Sbjct: 85 FSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGCRNGLGK----VPIFLTHFTMNSVA 140 Query: 120 ESFRYCFK----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSL 174 F Y K D+ + ++ +IE D+ S+G +E +P+ HG L Sbjct: 141 ARFPYLLKNKLEEGDEGSQVIQLDWTIIEG-DIDKPFVSSG--LEFVPLPVMHGEDYVCL 197 Query: 175 GFRFGN---VAYCTDVNAF-----PAESLEKLQNLDFLIIDALKNGLH------SSHFSL 220 GF FG +AY +DV+ A S LD LI++ N LH S H +L Sbjct: 198 GFLFGRRSRIAYLSDVSRILPRTEHAISKSGAGQLDLLILET--NELHGEGDAGSCHLTL 255 Query: 221 SESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPSRVVPAFDG 263 S++L ++ I+PK A+L M+ + ++ + L S + P G Sbjct: 256 SQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAEWSSSLSPTVRG 301 >gi|125545032|gb|EAY91171.1| hypothetical protein OsI_12780 [Oryza sativa Indica Group] Length = 302 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 34/239 (14%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I + G++ +I+D G F QVLR ++ +++++ TH H Sbjct: 45 PEQNPNYRCNTSLLIDYYQDDGTHEYIIIDVGKTFREQVLRWFVHHKIPWVNSIILTHEH 104 Query: 86 ADHIHGIDGLRGYFLKQK------RPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYP 135 AD + G+D + + ++ K R + ++ M + F Y K D+ + Sbjct: 105 ADAVLGLDDV--WMVQPKGCSNDFRRVPIFLTQFTMDSVVARFPYLLKNKPEEGDEVSQV 162 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPA 192 ++ +IE D+ S+G +P++ G I LGF FG +AY +DV+ F Sbjct: 163 AQLDWRIIE-GDIDKPFVSSGLEFVPLPVMHGEGNI-CLGFLFGRKAKIAYLSDVSRFLP 220 Query: 193 ESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 E+ + LD LI++ N LH ++L ++ I+PK A+L M + ++ Sbjct: 221 ETEYAISKSGAGQLDLLILET--NTLH------GKTLDAVKRISPKRALLIGMRHEFEH 271 >gi|88603582|ref|YP_503760.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189044|gb|ABD42041.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 240 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 34/248 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 ILG G ++G P + C R R+SL I+ + +I+DT PD Q Sbjct: 5 ILGSGDAVGTPHVGCHCKNCTYAREAGIERLRTSLLIT-----NEDRHLIIDTTPDLRRQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L+ IDAV++TH H DH G G F + +R VY AP+ + Sbjct: 60 LLQAGSPKIDAVIWTHGHYDHFMGF----GDFYRVQRIPPVYGAPEVLA----------- 104 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAY 183 + P+ + ++ E V + +E + +H I + G + + Y Sbjct: 105 -----SCSPVFHFLIREERPVEVYTPFITCGLEVTLVRVEHPNIYTTGVIISDGRTRIGY 159 Query: 184 CTDVNAF-PAESLEKLQNLDFLIIDALKNGLH---SSHFSLSESLKKIELINPKNAILTH 239 +D N P +S + L+ +D L ID L + H + E+++ + + K+ + H Sbjct: 160 TSDTNELIPPKSRDLLRGVDMLFIDGLFTDSYKKVEKHLNYEEAIRLAKELKVKDFRIVH 219 Query: 240 MHVDLDYD 247 M + +D Sbjct: 220 MSHIIPFD 227 >gi|147919570|ref|YP_686690.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110622086|emb|CAJ37364.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 246 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 43/248 (17%) Query: 7 FTILGCGASLGVPRITGDWGAC--DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G ++G P+I AC K+RR R + ++ V+++TGPD Sbjct: 3 ITLLGTGDAVGTPKIGCKCPACLDAKKGGKSRRYRPGILVT-----DGKLNVMIETGPDL 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + IDAV+++H H DH G G F + K + VY + ++ F + Sbjct: 58 RSQLLDNDIERIDAVVWSHQHRDHTGGF----GDFWRVKSNMPVYGEKQVLDYVLGEFHF 113 Query: 125 -CFKALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F D Y P + + E PI M + + + +G+ Sbjct: 114 MSFDRHDCELYRPFMIGELEFTLFEVTHPPIRMATGMRI-------RHNGK--------- 157 Query: 180 NVAYCTDVN-AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN------P 232 + Y D N P+ES+ + + D LI DA+ H ++ + + + +N Sbjct: 158 TLVYTGDTNRQIPSESMAIMMDPDLLIADAIV----PPHINIDKHMNAADAMNLAMETRA 213 Query: 233 KNAILTHM 240 K +LTH+ Sbjct: 214 KTTLLTHI 221 >gi|315649092|ref|ZP_07902185.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315275527|gb|EFU38882.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 261 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 47/258 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T LG G ++GVPR+ D C NRR RSS+ + + ++D GPD Sbjct: 8 LTFLGTGDAMGVPRVYCDCEVCTEARNTGVNRRLRSSVMVE-----CGEASFMIDCGPDW 62 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI----DGLRGYFLKQKRPIDVYAAPDCMKHL 118 F M+ L ++ + +L TH H DHI G+ D R +L +K + YA D ++ + Sbjct: 63 RFMMEGLGKR--KMRDMLITHAHFDHIGGLPEWSDACR--WLGEKGRL--YAPADVLEQI 116 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFR 177 R YP + P +E V + G I + HG+ S +R Sbjct: 117 V------------RQYPWL--PRQMEMTAVDDGITLGGWEISCWKV--NHGKNGYSYAYR 160 Query: 178 FGNVAYCT-----DVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSH--FSLSESLKKI 227 Y +N PAE E L+ LD L++ + + S + + E+ + + Sbjct: 161 LQKGEYTWVYNSDSINLSPAEK-EPLKGLDLLVLGTSFVHETAIFESRSVYDMKEAAQLL 219 Query: 228 ELINPKNAILTHMHVDLD 245 +NP+ I THM D+D Sbjct: 220 SEVNPRQTIYTHMSHDVD 237 >gi|58264754|ref|XP_569533.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57225765|gb|AAW42226.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 480 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 27/196 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P KN+R +S+ + + S G V+VD G F Q +R V +IDAVL TH H Sbjct: 93 PEGWKNKRGNTSVLLRKQSAEGDWKNVLVDVGKTFREQAMRFFPTWGVKTIDAVLLTHGH 152 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF---KALDDRTYPPIVNPIV 142 AD G+D LR + ++Q + I VY + + E+F Y K P ++ I+ Sbjct: 153 ADAYFGLDDLREWCVRQGKAIPVYLNKETFHKVEETFPYMVDKTKVSGGGDVPQLIWKII 212 Query: 143 -------IENNDVPICMKSAGGVIEAI-------PILQQHGRISS-----LGFRFGN-VA 182 +E DV + G +I P+ + +I L F F + + Sbjct: 213 EDEGEFQVEGIDVKVLPVHHGIYFHSILPPTNAEPVREPPAKIEPEPLICLAFEFDDSII 272 Query: 183 YCTDVNAFPAESLEKL 198 Y +DV+ P + +++ Sbjct: 273 YMSDVSGIPQRTWDRM 288 >gi|134109883|ref|XP_776491.1| hypothetical protein CNBC5450 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259167|gb|EAL21844.1| hypothetical protein CNBC5450 [Cryptococcus neoformans var. neoformans B-3501A] Length = 480 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 27/196 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P KN+R +S+ + + S G V+VD G F Q +R V +IDAVL TH H Sbjct: 93 PEGWKNKRGNTSVLLRKQSAEGDWKNVLVDVGKTFREQAMRFFPTWGVKTIDAVLLTHGH 152 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF---KALDDRTYPPIVNPIV 142 AD G+D LR + ++Q + I VY + + E+F Y K P ++ I+ Sbjct: 153 ADAYFGLDDLREWCVRQGKAIPVYLNKETFHKVEETFPYMVDKTKVSGGGDVPQLIWKII 212 Query: 143 -------IENNDVPICMKSAGGVIEAI-------PILQQHGRIS-----SLGFRFGN-VA 182 +E DV + G +I P+ + +I L F F + + Sbjct: 213 EDEGEFQVEGIDVKVLPVHHGIYFHSILPPTNAEPVREPPAKIEPEPLICLAFEFDDSII 272 Query: 183 YCTDVNAFPAESLEKL 198 Y +DV+ P + +++ Sbjct: 273 YMSDVSGIPQRTWDRM 288 >gi|222625444|gb|EEE59576.1| hypothetical protein OsJ_11873 [Oryza sativa Japonica Group] Length = 1053 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 40/248 (16%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I G + +++D G F QVLR ++ +D+++ TH H Sbjct: 43 PERNPNYRCNTSLLIDYCQHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEH 102 Query: 86 ADHIHGID--------GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK----ALDDRT 133 AD + G+D G R K + ++ M + F Y K D+ + Sbjct: 103 ADAVLGLDDVWVVQPSGCRNGLGK----VPIFLTHFTMNSVAARFPYLLKNKLEEGDEGS 158 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNA 189 ++ +IE D+ S+G +E +P+ HG LGF FG +AY +DV+ Sbjct: 159 QVIQLDWTIIEG-DIDKPFVSSG--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSR 215 Query: 190 F-----PAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILT 238 A S LD LI++ N LH S H +LS++L ++ I+PK A+L Sbjct: 216 ILPRTEHAISKSGAGQLDLLILET--NELHGEGDAGSCHLTLSQTLNAVKRISPKRALLI 273 Query: 239 HMHVDLDY 246 M+ + ++ Sbjct: 274 GMNHEFEH 281 >gi|53749417|gb|AAU90275.1| calcium binding EGF domain containing protein [Oryza sativa Japonica Group] gi|108710052|gb|ABF97847.1| Calcium binding EGF domain containing protein, expressed [Oryza sativa Japonica Group] Length = 1096 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 40/248 (16%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I G + +++D G F QVLR ++ +D+++ TH H Sbjct: 43 PERNPNYRCNTSLLIDYCQHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEH 102 Query: 86 ADHIHGID--------GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK----ALDDRT 133 AD + G+D G R K + ++ M + F Y K D+ + Sbjct: 103 ADAVLGLDDVWVVQPSGCRNGLGK----VPIFLTHFTMNSVAARFPYLLKNKLEEGDEGS 158 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNA 189 ++ +IE D+ S+G +E +P+ HG LGF FG +AY +DV+ Sbjct: 159 QVIQLDWTIIEG-DIDKPFVSSG--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSR 215 Query: 190 F-----PAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILT 238 A S LD LI++ N LH S H +LS++L ++ I+PK A+L Sbjct: 216 ILPRTEHAISKSGAGQLDLLILET--NELHGEGDAGSCHLTLSQTLNAVKRISPKRALLI 273 Query: 239 HMHVDLDY 246 M+ + ++ Sbjct: 274 GMNHEFEH 281 >gi|261408973|ref|YP_003245214.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261285436|gb|ACX67407.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 259 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 38/272 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++GVPR+ D C NRR RSS+ + T+ ++D GPD+ Sbjct: 6 LTFLGTGDAMGVPRVYCDCEVCTEARSTGVNRRLRSSVMVE-----CGETSFMIDCGPDW 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + + +L TH H DHI G+ Q+ +YA + + + Sbjct: 61 RGMMEGLGIRKMSDMLITHAHFDHIGGLPEWSDACRWQREKGRLYAPAEVLDQIV----- 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGNVAY 183 R YP + P +E V AG I + HG+ S +RF Y Sbjct: 116 -------RQYPWL--PRQMEMTPVDDGFTLAGWEISCWKV--NHGKNGYSYAYRFQKDGY 164 Query: 184 CTDVNA----FPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINP 232 N+ E + L+ +D L++ + +H S + + E+ + + + P Sbjct: 165 TWVYNSDSIHLSLEEKKPLKGVDLLVLGT--SFVHETAKFETRSVYDMKEAAELLAEVKP 222 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 + + THM D+D L P V A GM Sbjct: 223 RQTVYTHMSHDVDVRKEL-PLPEGVRVAVAGM 253 >gi|288931203|ref|YP_003435263.1| ATP-binding protein PhnP (PhnP) [Ferroglobus placidus DSM 10642] gi|288893451|gb|ADC64988.1| ATP-binding protein PhnP (PhnP) [Ferroglobus placidus DSM 10642] Length = 252 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 32/240 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S G P I C+ KN R + V G N ++VDT PD Q+ Sbjct: 5 LLGTGDSPGTPVIGCHCQTCEDAR-KNGWERKRFSV-LVQNEGRN--ILVDTSPDMRTQL 60 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE-SFRYCFK 127 LR V +DAV++TH H DH G G F + + ++VY +P+ + + F ++ Sbjct: 61 LRMNVDKVDAVIWTHCHYDHFAGF----GDFYRVQSNVNVYTSPEVHEDIGRFMFFMKYR 116 Query: 128 ALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 + Y P + + + N P ++ A GV+ I G + V Sbjct: 117 PFEVEAYEPFKIFGLEFTLFDVNHPP--LRRAHGVV-----------IRKGGIK---VVV 160 Query: 184 CTDVNA-FPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILTHM 240 D N+ P S++++ N D I+DA+ + H + SE+L + I K + TH+ Sbjct: 161 SGDTNSNIPQRSIKEMMNPDLFIVDAIAPAGYKLKKHMNASEALSLAKKIKAKKVVFTHV 220 >gi|301063233|ref|ZP_07203782.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300442661|gb|EFK06877.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 310 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 8/104 (7%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPK-NRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G + GVP I D C K RR R+S+ ++ ++ T+++D GPD Sbjct: 5 TFLGTGGAWGVPEINCDCAICREMRAKGERRDRTSILLA-----DNDATLLIDCGPDARE 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 Q+ R +V IDAVL +H H DH G+D L + K+ P +V++ Sbjct: 60 QLRRNKVKKIDAVLISHEHNDHYIGLDEL--FVYKRVLPNEVFS 101 >gi|330813168|ref|YP_004357407.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486263|gb|AEA80668.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] Length = 106 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Query: 166 QQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 +HG ++G++ N +AY DV P ++++K+ N+ +LIID + H+ H SL E+L Sbjct: 1 MKHGSTKTIGYKINNDIAYIPDVKTIPKKTIKKILNIKYLIIDCFRTKEHNLHVSLKETL 60 Query: 225 KKIELINPKNAILTHMHVDLD--YDMVLKSTPSRVVPAFDGMQFS 267 I LI P+ A LTHM DLD + P +DG++F+ Sbjct: 61 NYINLIKPEKAFLTHMSKDLDYNNLKNKLKKYKNIEPCYDGIKFN 105 >gi|321253279|ref|XP_003192686.1| hypothetical protein CGB_C2630C [Cryptococcus gattii WM276] gi|317459155|gb|ADV20899.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 481 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 48/211 (22%) Query: 27 ACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAV 79 A DP P KN+R +S+ + + + G V+VD G F Q +R V +IDAV Sbjct: 88 AVDPDVPEGWKNKRGNTSVLLRKQTAEGDWKNVLVDVGKTFREQAMRFFPKWGVKTIDAV 147 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY--------------- 124 L TH HAD G+D LR + ++Q I VY + + + E+F Y Sbjct: 148 LLTHGHADAYFGLDDLREWCVRQGSAIPVYLNKETFRAVEETFPYMVDKTKVSGGGDVPQ 207 Query: 125 -CFKALDD-----------RTYPP----IVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 +K ++D R +P + ++ N P+C A +E P++ Sbjct: 208 LIWKVIEDEGEFQVEGIDVRVFPVHHGIYFHSVLPPTNAEPVCDPPAK--LEPEPLI--- 262 Query: 169 GRISSLGFRF-GNVAYCTDVNAFPAESLEKL 198 L F F ++ Y +DV+ P + ++L Sbjct: 263 ----CLAFEFDASIIYMSDVSGIPQRTWDRL 289 >gi|297624828|ref|YP_003706262.1| beta-lactamase-like protein [Truepera radiovictrix DSM 17093] gi|297166008|gb|ADI15719.1| beta-lactamase-like protein [Truepera radiovictrix DSM 17093] Length = 262 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 43/274 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPK-----NRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG S GVPR W AC N RTR S+ I V++D P+ Sbjct: 9 FLGAADSQGVPRW---WCACSVCRDARGGGVNARTRPSVLIE------GPERVLIDAAPE 59 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +Q RE + A L TH H DH+ G+ L + +YA + M+ L F Sbjct: 60 LRLQASREGLTGFSAALITHAHNDHVLGLGDLADWSRWTGARCPIYAPREVMEALAARFP 119 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRIS-SLGFRF--- 178 Y L +Y + +E+ C ++ AG + A+ + HG + GFRF Sbjct: 120 Y----LQTASYRARTPLLALEDA---ACSRTFAGYRVSALRV--PHGFNGFAYGFRFEGP 170 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELI 230 G Y D L + L L++ A K G S + + E+L + + Sbjct: 171 GGAWGYLPDC--LDLADLAPWRGLKLLVLGASFFREAAPKAG--RSVYDVQEALALLAEL 226 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 PK A+LTH+ +D + P V A DG+ Sbjct: 227 KPKRALLTHLGHGVD---ARQGAPDGVQYARDGL 257 >gi|218193394|gb|EEC75821.1| hypothetical protein OsI_12786 [Oryza sativa Indica Group] Length = 313 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 65/296 (21%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR- 70 C SL +P P N R +SL I G + +++D G F QVLR Sbjct: 36 CSQSLSLP----------PERNPNYRCNTSLLIDYCQHDGIHKYILIDVGKTFREQVLRW 85 Query: 71 ---EQVLSIDAVLYTHPHADHIHGID--------------GLRGYFLKQKRPIDVYAA-- 111 ++ +D+++ TH HAD + G+D G FL Q +D AA Sbjct: 86 FSHHKIPYVDSIILTHEHADAVLGLDDVWVIQPSGCGNGFGQLPIFLTQFT-MDSVAARF 144 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR- 170 P MK+ E D+ + ++ +IE D+ S+G +E +P+ HG Sbjct: 145 PYLMKNNLEEG-------DEGSQVIQLDWRIIEG-DIDKPFVSSG--LEFVPLPVMHGED 194 Query: 171 ISSLGFRFGN---VAYCTDVNAF-----PAESLEKLQNLDFLIIDALKNGLH------SS 216 LGF FG +AY +DV+ A S LD LII+ N LH S Sbjct: 195 YVCLGFLFGRKARIAYLSDVSRILPRTEHAISKSGAGQLDLLIIET--NELHGEGDAGSC 252 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPSR----VVPAFDGMQ 265 H +LS++L ++ ++PK A+L M+ + ++ + L SR V A DG++ Sbjct: 253 HLTLSQTLNAVKRLSPKRALLIGMNHEFEHHKENQTLAEWSSREGIPVQLAHDGLR 308 >gi|304398902|ref|ZP_07380772.1| phosphonate metabolism protein PhnP [Pantoea sp. aB] gi|304353606|gb|EFM17983.1| phosphonate metabolism protein PhnP [Pantoea sp. aB] Length = 256 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 38/271 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G P D AC + T + S + E G + +++D G + Sbjct: 3 LTFLGTGGVTAAPLPGCDCHACQ--RAQRNSTHARAPCSALIESG-HERILLDAG--LPL 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC- 125 R S+ +L TH H DH+ G+ LR PI V+ PD R C Sbjct: 58 LASRFPPGSLTRILLTHYHMDHVQGLFALR---WGVGAPIPVWGPPD--------PRGCD 106 Query: 126 --FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 +K + P + P V A G ++ P+ QH +++ G+ F Sbjct: 107 DLYKHPGLLDFRPALTPFVAH----------AFGELQVTPLPLQHSKLTH-GYLFDWHDT 155 Query: 180 NVAYCTDVNAFPAESLEKL--QNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKNA 235 +A+ D P ++ + L Q LD L+ID +H L+++L E + P+ Sbjct: 156 RLAWLCDTCGLPPDTADFLRGQPLDQLVIDCNDPPRAEPRNHNDLTQALAIAERLKPRQT 215 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTH+ ++D + P V+PA DG Sbjct: 216 WLTHLSHEMDNWLAENPLPEGVLPARDGQTL 246 >gi|327394349|dbj|BAK11771.1| protein PhnP [Pantoea ananatis AJ13355] Length = 256 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 40/273 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G G P D AC + RR +S I ER +++D G Sbjct: 3 LTLLGTGGVTGAPVFGCDCHACLRARDASRYRRAPTSALIEAGRER-----ILLDAGLPL 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + R Q I+ +L TH H DH+ G+ LR + I V+ PD K + F++ Sbjct: 58 LAE--RFQPGEINRILLTHYHMDHVQGLFTLR---WGEGESIPVWGPPD-DKGCDDLFKH 111 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 L D + P + P V G ++ P+ QH R++ G+ F Sbjct: 112 --PGLLD--FRPALTPYVAHQF----------GELQVTPLPLQHSRLTH-GYLFDWHGSR 156 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L Q LD L++D + G +H L+ +L I+ + P Sbjct: 157 LAWLCDTCGLPPDTADFLRGQRLDHLLVDCNDPPGQGG--RNHNDLTAALNIIDELKPHQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 A L H+ +D + + P V A DG+ S Sbjct: 215 AWLIHLSHHMDNWLAEHALPDGVRAACDGLSLS 247 >gi|40804950|gb|AAR91743.1| PhnP [Pseudomonas stutzeri] Length = 249 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 74/278 (26%), Positives = 111/278 (39%), Gaps = 49/278 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG-PD 63 T+LG G + VP AC +P RR S + +R ++D+G PD Sbjct: 3 LTLLGTGGAAQVPVYNCACPACRAAQLDPSRRRRACSALVDCGGQR-----WLLDSGLPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-F 119 R S +L TH HADH G+ LR G + P D D KH Sbjct: 58 L---CERFAPGSFSGILQTHYHADHAQGLLQLRWGTGLHIPVLGPDDAEGLADLYKHPGI 114 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP----ILQQHGRISSLG 175 F F A + R + +P+ + + P +L+ H R Sbjct: 115 LDFSEPFAAFEQRMLG------TLRVTALPL--------VHSKPTFGYLLEGHSRC---- 156 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 +AY TD P + E LQ+ LD L++D ++ +H L+ +L+ IE + Sbjct: 157 -----IAYLTDTVGLPDSTRELLQDTALDVLVLDCSTPPRDTPPRNHNDLTRALQSIEEL 211 Query: 231 NPKNAILTHMHVDLD--YDMVLKSTPSRVVPAFDGMQF 266 P A+LTH+ +LD + + P V A+DGM Sbjct: 212 QPAQAVLTHIGHELDAWFMQASRELPDNVCLAYDGMTL 249 >gi|308068052|ref|YP_003869657.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] gi|305857331|gb|ADM69119.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] Length = 256 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 39/252 (15%) Query: 9 ILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G ++GVPR+ D C T +N R RSS+ I +E ++D GPD+ Sbjct: 6 FLGTGDAMGVPRVYCDCLVCTEARTTGENVRLRSSVLIESETE-----NFMIDCGPDWRR 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+ + I +L TH H DHI G+ +YA + + + F + Sbjct: 61 QLELRGLRFIPTILVTHAHFDHIGGLPEWADACRWTGNRGRLYAPQEVIDTILRQFSWLS 120 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG--------RISSLGFRF 178 LD +P+ + G HG R+ GF + Sbjct: 121 GNLD----------------LIPVDQGAQLGGWNIRGWRVNHGKNGYAYAYRLEKDGFSW 164 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIELIN---PK 233 AYC+D + L NL+ L++ + S+ + L+ ELI P+ Sbjct: 165 ---AYCSDSIGLNEAEILPLHNLNLLVLGTSFFHEEAEYATRSVYDMLEAQELIGRLKPE 221 Query: 234 NAILTHMHVDLD 245 + I THM D+D Sbjct: 222 STIFTHMSHDVD 233 >gi|219853143|ref|YP_002467575.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219547402|gb|ACL17852.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 239 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 33/247 (13%) Query: 9 ILGCGASLGVPRITGDWGAC-DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G ++G P+I C + +R R+SL I V +R +++DT PD Q Sbjct: 5 LLGTGDAIGTPKIRCACPQCMEAYRTGEQRLRTSLLIE-VDDR----HLLIDTSPDLRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L IDAV++TH H DH G G F + ++P VY A + +++ ++F + Sbjct: 60 LLCAGSPEIDAVIWTHGHYDHFMGF----GEFYRVQKPPAVYGAAEVLEYCGQTFSF--- 112 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAY 183 L +P V P + G I P+ H + G R + + Y Sbjct: 113 -LPFERHP--VTPFKP--------FELLGMTITLFPV--NHPPAYTTGLRIEHQGTVICY 159 Query: 184 CTDVNA-FPAESLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESLKKIELINPKNAILTHM 240 D A S LQ D L+ID + G H H + E+ + E K H+ Sbjct: 160 TADTRADLDPASRAMLQGADLLLIDGIVPPGFHIHKHMNYEEACQIAEESGAKEFRCVHL 219 Query: 241 HVDLDYD 247 + +D Sbjct: 220 SHRIPFD 226 >gi|325120383|emb|CBZ55937.1| Metallo-beta-lactamase family protein, related [Neospora caninum Liverpool] Length = 756 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 6/93 (6%) Query: 159 IEAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLD---FLIIDALKNGL 213 I++ P+ G SLGF G+ + Y +DV +FP L++L++LD L++DA+ L Sbjct: 621 IQSFPVYHG-GTYVSLGFLVGDKKLVYISDVTSFPTPVLDRLRHLDDLETLVVDAIGEKL 679 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H++HFS+ E+L L+ P+N L M L++ Sbjct: 680 HNAHFSVQEALALAVLLQPRNVFLVGMSCSLEH 712 >gi|331231748|ref|XP_003328537.1| hypothetical protein PGTG_10496 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307527|gb|EFP84118.1| hypothetical protein PGTG_10496 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 412 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 71/285 (24%) Query: 9 ILGCGASLGVPRIT-----GDWGA--CDPTNPKN--RRTRSSLKISRVSERGSNTT---- 55 +LG G S VP I D G C + K+ R T + L+I S + S Sbjct: 13 LLGTGTSGQVPSIACLTDPEDQGCRCCKSEDRKDLRRNTSALLRIHHPSNKTSPDAPSTP 72 Query: 56 --VIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--KRPI 106 +++D G F + RE + +DAVL THPHAD I+G+D LR + L + I Sbjct: 73 LHLLIDVGKSF-CEAAREFFPKHNIRRLDAVLLTHPHADAINGLDDLRAWTLGGAIQDSI 131 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP-IVIENNDVP----------ICMKSA 155 +Y C ++ R YP +VN DVP I Sbjct: 132 PIY----CNEYTHTEI--------SRMYPYLVNSHAKTGGGDVPQFTWNIIRDGISFTLF 179 Query: 156 GGVIEAIPILQQHGR-----------ISSLGFRFGNVAYCTDVNAFPAESLEKL------ 198 G +E +P+ HG+ I + + Y +DV+ P E++ K+ Sbjct: 180 G--VEILPLPVHHGKFFESNSKDKPYICTSYMIAKTIYYVSDVSEIPEETMTKILESHSG 237 Query: 199 ------QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 L+ LIID L+ H+SHF +++++ + +NP L Sbjct: 238 RGDGGGGRLNVLIIDTLRLLPHASHFGIAQAIHAAQRLNPIRTYL 282 >gi|298713832|emb|CBJ27204.1| conserved unknown protein [Ectocarpus siliculosus] Length = 494 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 26/239 (10%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVI---VDTGPDFYMQVLR----EQVLSIDAVLY 81 D + R+++S SE SNT V +DTG + +R V +D ++ Sbjct: 228 DSDGDSDGRSQASQSEEVTSEGRSNTQVKHVQIDTGKTWREGAIRWFPRHGVRGLDGIVL 287 Query: 82 THPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDR----TYPP 136 TH HAD + G+D +R +KR P V+ + + + F Y DD + Sbjct: 288 THDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNGAGGRFVA 347 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFG----NVAYCTDVNAFP 191 +N V ++ P + G +E P HG S GF FG + Y +DV+ P Sbjct: 348 ALNFNVFQDFQ-PFEV----GGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVP 402 Query: 192 AESLEKLQN---LDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ES+E L+ + L+ DAL + H +HF + +S+ + + +L + D++Y Sbjct: 403 PESMEFLEKHGPMQLLVCDALMVSKKHRTHFCVEDSVVLAGQLKARRTLLVGLGSDIEY 461 >gi|152985004|ref|YP_001347141.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PA7] gi|150960162|gb|ABR82187.1| phosphonate metabolism protein PhnP [Pseudomonas aeruginosa PA7] Length = 256 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/274 (26%), Positives = 108/274 (39%), Gaps = 40/274 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP D AC + + RR S + +R + + D F Sbjct: 3 LTLLGTGDARQVPVYGCDCPACGRARIDERLRRRPCSALLEHAGQRWLIDSGLADLCERF 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 S+D +L TH HADH G+ LR G + P D D KH Sbjct: 63 PPH-------SLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVN---PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F F A + R + P+ P+V ++ G E P Sbjct: 116 DFSQPFSAFERRQWGPLAATALPLVHSKPTFGYLLE--GASEEGAPR------------- 160 Query: 178 FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 +AY TD PA+S +L LD L++D + +H L+ +L+ IE + P Sbjct: 161 --RLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRP 218 Query: 233 KNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGM 264 + A+LTH+ LD ++ + P V A DGM Sbjct: 219 RRAVLTHVGHALDAWLLEHPAALPEGVELARDGM 252 >gi|299755985|ref|XP_002912154.1| hypothetical protein CC1G_13686 [Coprinopsis cinerea okayama7#130] gi|298411471|gb|EFI28660.1| hypothetical protein CC1G_13686 [Coprinopsis cinerea okayama7#130] Length = 400 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 109/299 (36%), Gaps = 84/299 (28%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPH 85 P +N R +S + G T+++D G +F L + + IDA+L TH H Sbjct: 53 PAGRRNIRRNTSAALRVKGRDGQPVTIVIDVGKNFQAAALEWFPKYGLRKIDALLITHAH 112 Query: 86 ADHIHGIDGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP------PI 137 AD ++G+D LR + L+ + IDVY + D F + F L + + P Sbjct: 113 ADAMNGLDDLRAWTLRGAIQSHIDVYVSADT----FSEVKRSFPYLVSKEFASGGGDVPE 168 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHG---------------------------- 169 +I++ VP + G I +P HG Sbjct: 169 FQWHIIQDQ-VPFEIGDTG--IRVVPFAVHHGRLFTTSTSNVCEHPTPPAAKPVPLADSP 225 Query: 170 --RISSLG------------------------FRFG-----NVAYCTDVNAFPAESLEKL 198 R++SL FG + Y +DV+ P L Sbjct: 226 PLRVASLSRPDKEVIENNRAGSEVTRETVYPYLSFGYKIQERLVYISDVSHIPEHVWPLL 285 Query: 199 ------QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 Q L ++D L+ G H+SHF L +SLK IN LT ++ +D ++ Sbjct: 286 EPKADGQRLAVTVLDCLRLGPHTSHFGLEDSLKMARRINATRTYLTGFGHEVSHDEYVR 344 >gi|116051390|ref|YP_789777.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa UCBPP-PA14] gi|296388115|ref|ZP_06877590.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PAb1] gi|115586611|gb|ABJ12626.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 256 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ IE + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DGM Sbjct: 222 VLTHVGHALDAWLLDHPAALPEGVELAHDGM 252 >gi|295704500|ref|YP_003597575.1| hypothetical protein BMD_2377 [Bacillus megaterium DSM 319] gi|294802159|gb|ADF39225.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 259 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/270 (23%), Positives = 100/270 (37%), Gaps = 29/270 (10%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 G + GVPR+ D C + N+RTR S + + ++D PDF Q Sbjct: 8 GTSDAQGVPRLLCDCKVCTQKDQLNQRTRPSAQFTM-----DGNVFLIDVSPDFKHQFHL 62 Query: 71 EQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 I V THPH DH+ G+ L +V AP+ + L E F Y L Sbjct: 63 YNNKKIPSTVFITHPHNDHVAGLGDLADLCYWNNVNTEVVGAPEVISELTERFPY----L 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 R + ++ + I G I + Q+ G AY + Sbjct: 119 AKRKGLTFKGTLKWDSGETTITFHKVNHGFNGHSYGIVVHQKQGE---------RWAYVS 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDA--LKNGLHS---SHFSLSESLKKIELINPKNAILTHM 240 D E + +LD LI K L S + ++E+++ + KN + TH+ Sbjct: 170 DSFNVTKEQWQPFYHLDLLIFGTSFWKEYLQKEKRSVYDVTEAMEIKAKLQAKNMVFTHL 229 Query: 241 HVDLDYDMVLKS-TPSRVVPAFDGMQFSSP 269 D+D + + V A+DG + P Sbjct: 230 SHDIDIQKHAEMLSDENVSFAYDGREILLP 259 >gi|154150028|ref|YP_001403646.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998580|gb|ABS55003.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 240 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 30/185 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G ++G P+I D C R R+SL I + ++VDT PD Q Sbjct: 5 LLGTGDAIGTPKIGCDCPQCQHAQKTGIGRLRTSLLIEQ-----DGRHILVDTSPDLRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++R IDAV++TH H DH G G F + ++ VYA +++ +FR+ Sbjct: 60 LIRSGSPHIDAVVWTHGHYDHFMGF----GEFYRVQKCPPVYAPEPVLRYCGGTFRF--- 112 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAY 183 + E N V + I P L +H + GF F V Y Sbjct: 113 -------------LEFEQNPVEPYVPFELFGITITPFLVKHPPAYTCGFVFERGGVRVGY 159 Query: 184 CTDVN 188 +D N Sbjct: 160 TSDTN 164 >gi|294499169|ref|YP_003562869.1| hypothetical protein BMQ_2412 [Bacillus megaterium QM B1551] gi|294349106|gb|ADE69435.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 259 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 28/245 (11%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 G + GVPR+ D C + N+RTR S + + ++D PDF Q Sbjct: 8 GTSDAQGVPRLLCDCKVCTQKDQLNQRTRPSAQFTM-----DGNVFLIDVSPDFKHQFHL 62 Query: 71 EQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 I V THPH DH+ G+ L +V AP+ + L E F Y L Sbjct: 63 YNNKKIPSTVFITHPHNDHVAGLGDLADLCYWNNVNTEVVGAPEVISELTERFPY----L 118 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 R + ++ + I G I + Q+ G AY + Sbjct: 119 AKRKGLTFKGTLKWDSRETTITFHKVNHGFNGHSYGIVVHQKQGE---------RWAYVS 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIEL---INPKNAILTHM 240 D E + +LD LI K L S+ + + +E+ + KN + TH+ Sbjct: 170 DSFNVTKEQWQPFYHLDLLIFGTSFWKEYLQKEKRSVYDVTEAMEIKAKLQAKNMVFTHL 229 Query: 241 HVDLD 245 D+D Sbjct: 230 SHDID 234 >gi|242075726|ref|XP_002447799.1| hypothetical protein SORBIDRAFT_06g015970 [Sorghum bicolor] gi|241938982|gb|EES12127.1| hypothetical protein SORBIDRAFT_06g015970 [Sorghum bicolor] Length = 335 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 31/231 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I + ++ +++D G F QVLR +V S+D+++ TH H Sbjct: 79 PERNPNYRLNTSLLIDYCHDE-THKYILIDIGKTFREQVLRWFVHHKVPSVDSIILTHEH 137 Query: 86 ADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPI 137 AD + G+D + + R I ++ M + F Y + D+ Sbjct: 138 ADAVLGLDEVWVVQPRNGRNDIEQIPIFLTQFTMDSISRRFPYLIEQKPEDGDEDAQAAK 197 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPAES 194 ++ +IE +DV ++G +P++ G + LGF FG VAY +DV+ F ++ Sbjct: 198 IDWKIIE-DDVDKPFVASGLEFMPLPVMHGEGYL-CLGFLFGRRSRVAYLSDVSRFLPKT 255 Query: 195 LEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + LD LI++A N LH SL I+ I PK A+L M Sbjct: 256 EHVISKSGAGQLDLLILEA--NALHGV------SLDAIKRIRPKRALLIGM 298 >gi|168705836|ref|ZP_02738113.1| hypothetical protein GobsU_40262 [Gemmata obscuriglobus UQM 2246] Length = 128 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 24/135 (17%) Query: 24 DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH 83 D C NP+N R R S+ +S + +++DT P+ +Q+LRE V + AV YTH Sbjct: 1 DCHVCTSDNPRNHRYRCSVLVS-----NAQGNLLIDTAPEMRLQLLRENVKLVHAVAYTH 55 Query: 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 H DH+ G+D + Y Y A M +FE K DD V+ Sbjct: 56 YHVDHLFGLDDVLCY--------QDYTA---MGLIFELLNRGLKVPDDVA--------VV 96 Query: 144 ENNDVPICMKSAGGV 158 +D+PI + A G+ Sbjct: 97 GADDLPIGEQFAIGI 111 >gi|291617943|ref|YP_003520685.1| PhnP [Pantoea ananatis LMG 20103] gi|291152973|gb|ADD77557.1| PhnP [Pantoea ananatis LMG 20103] Length = 256 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 40/273 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G G P D AC + RR +S I ER +++D G Sbjct: 3 LTLLGTGGVTGAPVFGCDCHACLRARDASRYRRAPTSALIEAGRER-----ILLDAGLPL 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + R Q I+ +L TH H DH+ G+ LR + I V+ PD K + F++ Sbjct: 58 LAE--RFQPGEINRILLTHYHMDHVQGLFTLR---WGEGESIPVWGPPD-DKGCDDLFKH 111 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 L D + P + P V G ++ P+ QH R++ G+ F Sbjct: 112 --PGLLD--FRPALTPYVAHQF----------GELQVTPLPLQHSRLTH-GYLFDWHGSR 156 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L Q LD L++D + G +H L+ +L I+ + P Sbjct: 157 LAWLCDTCGLPPDTADFLRGQRLDHLLVDCNDPPGQGG--RNHNDLTAALNIIDELKPHQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 A L H+ +D + + V A DG+ S Sbjct: 215 AWLIHLSHHMDNWLAEHALSDGVRAACDGLSLS 247 >gi|313108726|ref|ZP_07794720.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa 39016] gi|310881222|gb|EFQ39816.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa 39016] Length = 256 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 74/271 (27%), Positives = 111/271 (40%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADVGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ IE + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DGM Sbjct: 222 VLTHVGHALDAWLLDHPAALPEGVELAHDGM 252 >gi|15598568|ref|NP_252062.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PAO1] gi|9949507|gb|AAG06760.1|AE004759_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 256 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ IE + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ +D ++ + P V A DGM Sbjct: 222 VLTHVGHAVDAWLLDHPAALPEGVELAHDGM 252 >gi|310640832|ref|YP_003945590.1| beta-lactamase domain-containing protein [Paenibacillus polymyxa SC2] gi|309245782|gb|ADO55349.1| Beta-lactamase domain-containing protein [Paenibacillus polymyxa SC2] Length = 256 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 23/244 (9%) Query: 9 ILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G ++GVPR+ D C T N R RSS+ I +E ++D GPD+ Sbjct: 6 FLGTGDAMGVPRVYCDCLVCTEARTTGTNVRLRSSVLIKSETE-----DFMIDCGPDWRR 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+ + I +L TH H DHI G+ +YA + + + F + Sbjct: 61 QLELRSLRFIPTILVTHAHFDHIGGLPEWADACRWTGNRGRLYAPQEVIDTILRQFSWLP 120 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 LD P+ + + ++ + G A R+ GF + AYC+D Sbjct: 121 GNLD---LIPVDQGVQLGGWNIRGWRVNHGKNGYAYAY-----RLEKDGFSW---AYCSD 169 Query: 187 VNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + L NL+ L++ S + + E+ + + + P + + THM Sbjct: 170 SIGLNEAEILPLHNLNLLVLGTSFYHEKAEYATRSVYDMLEAQELVGRLKPGSTVFTHMS 229 Query: 242 VDLD 245 D+D Sbjct: 230 HDVD 233 >gi|284166691|ref|YP_003404970.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284016346|gb|ADB62297.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 274 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 8/105 (7%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G + G P + D C+ + RTR S+ + +ER + ++++D PDF Sbjct: 4 TLLGAGDTTGTPTVGCDCDTCEAARERGVERTRFSVHVE--NER-VDESLLIDFSPDFRY 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 Q LRE V DA + TH H DH+ G+ G + +DVYAA Sbjct: 61 QFLREDVALPDAAVITHIHFDHLDGL----GNVFRVFDSLDVYAA 101 >gi|126180030|ref|YP_001047995.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862824|gb|ABN58013.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 242 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 35/243 (14%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G ++G P+I D C+ RS L+ S + E +++++ PD Q Sbjct: 4 TLLGTGDAIGTPKIGCD---CENCRAMVAAGRSRLRTSFLVEI-EGKHILIESSPDLRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC-F 126 +LR IDAVL++H H DH G G F + ++ YAAP M + + F Sbjct: 60 LLRASSPHIDAVLWSHGHYDHFIGF----GEFYRVQKVPPAYAAPPVMDYCSGYLHFLPF 115 Query: 127 KALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + Y P V E N P+ + G +L +H ++ VA Sbjct: 116 EKHPVPVYEPFDLFGVTFTFFEVNHPPV--YTCG-------LLLEHDDVA--------VA 158 Query: 183 YCTDVNA-FPAESLEKLQ--NLDFLIIDALK-NGLH-SSHFSLSESLKKIELINPKNAIL 237 Y D P S + LQ ++D L +DA+ G + + H + E+++ + ++ Sbjct: 159 YTADTREDIPEASRDLLQKADIDLLFVDAIAPEGYNITKHMNYVEAVRFARGVGARDYRC 218 Query: 238 THM 240 HM Sbjct: 219 VHM 221 >gi|302698161|ref|XP_003038759.1| hypothetical protein SCHCODRAFT_255599 [Schizophyllum commune H4-8] gi|300112456|gb|EFJ03857.1| hypothetical protein SCHCODRAFT_255599 [Schizophyllum commune H4-8] Length = 445 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 23/140 (16%) Query: 7 FTILGCGASLGVPRI--------TGDWGAC-------DPTNPKNRRTRSSLKISRVSERG 51 F LG G S VP I D+ C P NRR R++ + R+ + G Sbjct: 5 FIFLGTGTSSSVPVIHCLTDDPKRPDYVPCRACLSSLTPEGKHNRR-RNTSGLLRIKKPG 63 Query: 52 SNT-TVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--R 104 + T+++D G F + + + IDA+L TH HAD ++G+D LRG+ L+ + Sbjct: 64 RDALTIVIDAGKTFQAAAIEWFPKYGLRRIDALLITHAHADAMNGLDDLRGWTLRGRIQH 123 Query: 105 PIDVYAAPDCMKHLFESFRY 124 IDVY + D + + SF Y Sbjct: 124 HIDVYCSQDTFREVERSFPY 143 >gi|268679800|ref|YP_003304231.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268617831|gb|ACZ12196.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 246 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 70/241 (29%), Positives = 97/241 (40%), Gaps = 34/241 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG + G+P C+ RS+ S E + +++D G D M Sbjct: 3 FEFLGTADTGGIPLHLCSCEVCEEARLNQTSNRST---SAFLELDDGSVILLDAGCDSLM 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 R +I AV TH HADH+ G+ LR K + I Y D E F Sbjct: 60 D--RFNTTTIRAVFLTHFHADHVLGLIRLR----KSAQKIICYTPDDT-----EGFGDLL 108 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVA 182 ++ Y IV P ++ AG I A+P+L H +++ GF VA Sbjct: 109 VHKNNIEY-RIVAPFET--------VEIAGVKIVAVPLL--HSKVTH-GFVLFTCKKRVA 156 Query: 183 YCTDVNAFPAESL--EKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIELINPKNAILT 238 Y TD ESL K Q+LD+L +DA S H + + IE INP+ L Sbjct: 157 YLTDCGGMSEESLLFLKEQHLDYLFLDAAYTPSFDSDKHLNWESAHALIERINPEYGYLI 216 Query: 239 H 239 H Sbjct: 217 H 217 >gi|254236333|ref|ZP_04929656.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126168264|gb|EAZ53775.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 256 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ IE + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DG+ Sbjct: 222 VLTHVGHTLDAWLLDHPAALPEGVELARDGV 252 >gi|326488929|dbj|BAJ98076.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 283 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 26/207 (12%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL + + G++ +++D G F QVLR +V +D+++ TH H Sbjct: 52 PEGNPNYRLNTSLLVDYCHDDGTHKYILIDIGKTFREQVLRWFVHHKVPYVDSIILTHEH 111 Query: 86 ADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKAL-----DDRTYPP 136 AD + G+D + + R I ++ M + F Y + +D Sbjct: 112 ADAVLGLDEVWVVQPRNGRNDVEQIPIFLTQFTMDSIARRFPYLVEQKPEDGDEDAQAAK 171 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPAE 193 I I+ E+ D P ++G +P++ G I LGF FG VAY +DV+ F E Sbjct: 172 IDWKIIEEDVDKPFV--ASGLEFVPLPVMHGEGYI-CLGFLFGRRARVAYLSDVSRFLPE 228 Query: 194 SLEKL-----QNLDFLIIDALKNGLHS 215 + + +D LI++A N LH Sbjct: 229 TEHAILKSGAGQVDLLILEA--NSLHG 253 >gi|308187346|ref|YP_003931477.1| Protein phnP [Pantoea vagans C9-1] gi|308057856|gb|ADO10028.1| Protein phnP [Pantoea vagans C9-1] Length = 256 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 42/273 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G P D AC N + R I+ ER +++D G Sbjct: 3 LTFLGTGGVTAAPLPGCDCPACQRAQRNSAHARAPCCALIAFGHER-----ILLDAG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + R ++ +L TH H DH+ G+ LR + PI V+ PD R Sbjct: 56 PLLASRFPPGTLTRILLTHYHMDHVQGLFALR---WGKGGPIPVWGPPD--------PRG 104 Query: 125 C---FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 C +K + P + P V A G ++ P+ QH +++ G+ F Sbjct: 105 CDDLYKHPGLLDFRPALTPFVAH----------AFGELQVTPLPLQHSKLTH-GYLFDWH 153 Query: 180 --NVAYCTDVNAFPAESLEKL--QNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINPK 233 +A+ D P ++ + L Q LD L+ID +H ++ +L L+ P+ Sbjct: 154 DTRLAWLCDTCGLPPDTADFLRGQPLDQLVIDCNDPPRAEAGNHNDVTRALAIAALLQPR 213 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTH+ ++D + P V PA DG Sbjct: 214 QTWLTHLSHEMDNWLAENPLPEGVQPARDGQTL 246 >gi|120537176|ref|YP_957233.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120553167|ref|YP_957518.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120323016|gb|ABM17331.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] gi|120327011|gb|ABM21318.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 261 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 40/274 (14%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G + GVPR AC +R R S + E SN +++D G M Sbjct: 4 TFLGTGGAGGVPRFGCTCPACQRAKTNHRHVRR--PCSALIED-SNHKILLDAG---LMD 57 Query: 68 VL-REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + R + + A++ TH H DH+ G+ LR + I VY PD + F F Sbjct: 58 LHDRFEPGELSAIVLTHYHPDHVQGLLHLR---WGKGESIPVYGPPDP-----DGFTDLF 109 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS---SLGFRFG-NVA 182 K +P +++ +D+ G P+ H +++ ++ R G A Sbjct: 110 K-----------HPGILDISDLSAFQALELGEFSLTPMPLNHSKLTFGYAIAHRNGARFA 158 Query: 183 YCTDVNAFPAESLEKLQNL--DFLIIDA------LKNGLHSSHFSLSESLKKIELINPKN 234 Y TD P ES + L+ + +D + +H ++ +L IE + Sbjct: 159 YLTDTLGLPEESADYLRQWRPGHIAVDCSHPPADVSGKAPQNHNDVTAALAMIEQSGAEQ 218 Query: 235 AILTHMHVDLDYDMVLKST--PSRVVPAFDGMQF 266 LTH+ + D ++ ++ P+ V PA DG+ F Sbjct: 219 GWLTHLGHETDCWLMANASALPNNVTPAADGLCF 252 >gi|329927332|ref|ZP_08281591.1| hypothetical protein HMPREF9412_4198 [Paenibacillus sp. HGF5] gi|328938471|gb|EGG34856.1| hypothetical protein HMPREF9412_4198 [Paenibacillus sp. HGF5] Length = 272 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 115/292 (39%), Gaps = 64/292 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG A+ G P C+ KN RTR+S + V + D PD Y Sbjct: 5 FLGTAAAEGFPNAFCRCEHCNKARELGGKNIRTRTSAILDDV--------IKFDYSPDSY 56 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHL-- 118 MQ LR+ + +I+ +L TH H DH + D G + P+ +Y M H Sbjct: 57 MQALRDNIDLGAIEHLLVTHSHMDHFNAADLECRREGIAHGLQHPLHIYGNGTVMHHTRA 116 Query: 119 ----FESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 FE RY F L R Y V P++ +++ + C+ + ++++ Sbjct: 117 AIGRFEGQRYQFHLL--RPYETFAMGDATVTPLLADHDRMETCL---------LYVIEKE 165 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIIDALK----NGLHSSH----- 217 G+ + Y D FP + L ++LD I+D N +H Sbjct: 166 GK---------KLLYGHDSGWFPDATWAWLKGKSLDCAILDCTHGYTGNSRDRNHMCVET 216 Query: 218 -FSLSESLKKIELINPKNAIL----THMHVDLDYDMVLKSTPSRVVPAFDGM 264 + +K ++ P+ I+ +H L D V +P+ ++PA+DG+ Sbjct: 217 VLEVQREFQKENILKPEGQIVVTHFSHNSKLLHEDFVRIFSPAGILPAYDGL 268 >gi|261408659|ref|YP_003244900.1| hypothetical protein GYMC10_4876 [Paenibacillus sp. Y412MC10] gi|261285122|gb|ACX67093.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10] Length = 272 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 116/292 (39%), Gaps = 64/292 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG A+ G P C+ KN RTR+S + V + D PD Y Sbjct: 5 FLGTAAAEGFPNAFCRCEHCNKARELGGKNIRTRTSAILDDV--------IKFDYSPDSY 56 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHL-- 118 MQ LR+ + +I+ +L TH H DH + D G + P+ +Y M H Sbjct: 57 MQALRDNIDLGAIEHLLVTHSHMDHFNAADLECRREGIAHGLQHPMHIYGNGTVMHHTRA 116 Query: 119 ----FESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 FE RY F L R Y V P++ +++ + C+ + ++++ Sbjct: 117 AIGRFEGQRYQFHLL--RPYETFAMGDATVTPLLADHDRMETCL---------LYVIEKE 165 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIIDALK----NGLHSSHFSLSE 222 G+ + Y D FP + L ++LD I+D N +H + Sbjct: 166 GK---------KLLYGHDSGWFPDATWAWLKGKSLDCAILDCTHGYTGNSRDRNHMCVET 216 Query: 223 SL------KKIELINPKNAIL----THMHVDLDYDMVLKSTPSRVVPAFDGM 264 L +K ++ P+ I+ +H L D V +P+ ++PA+DG+ Sbjct: 217 VLEAQREFQKENILKPEGQIVVTHFSHNSKLLHEDFVRIFSPAGILPAYDGL 268 >gi|218890428|ref|YP_002439292.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa LESB58] gi|218770651|emb|CAW26416.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa LESB58] Length = 256 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F + + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGSFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ IE + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DG+ Sbjct: 222 VLTHVGHTLDAWLLDHPAALPEGVELARDGV 252 >gi|107102904|ref|ZP_01366822.1| hypothetical protein PaerPA_01003973 [Pseudomonas aeruginosa PACS2] Length = 256 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ I+ + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIDSLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DG+ Sbjct: 222 VLTHVGHTLDAWLLDHPAALPEGVELARDGV 252 >gi|254242059|ref|ZP_04935381.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195437|gb|EAZ59500.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 256 Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 72/271 (26%), Positives = 112/271 (41%), Gaps = 34/271 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPDF 64 T+LG G + VP D AC +N R + L+ S + ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCDCPAC-----RNARADAGLRRRPCSALLECAGQRWLIDSG--L 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 56 VDLCERFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R + + + + P + G ++E + G I L Sbjct: 116 DFSQPFGAFERRQWGALAATALPLVHSKP----TFGYLLEGA---SEEGTIRRL------ 162 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 AY TD PA+S +L LD L++D + +H L+ +L+ I+ + P+ A Sbjct: 163 -AYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIDSLRPRRA 221 Query: 236 ILTHMHVDLDYDMV--LKSTPSRVVPAFDGM 264 +LTH+ LD ++ + P V A DG+ Sbjct: 222 VLTHVGHTLDAWLLDHHAALPEGVELARDGV 252 >gi|297613530|ref|NP_001067275.2| Os12g0615500 [Oryza sativa Japonica Group] gi|215712377|dbj|BAG94504.1| unnamed protein product [Oryza sativa Japonica Group] gi|255670483|dbj|BAF30294.2| Os12g0615500 [Oryza sativa Japonica Group] Length = 284 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 26/182 (14%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHAD 87 NP N R +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD Sbjct: 71 NP-NYRCNTSLLIDYCQDENAHKYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHAD 129 Query: 88 HIHGIDGLRGYFLKQK-------RPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPP 136 I G+D +R + Q P +Y + M + + F Y K ++ Sbjct: 130 AILGLDDVR---IVQSFSPTNDIEPTPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVA 186 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPA 192 ++ VIE +D+ I ++G +E +P+ HG LGF FG VAY +DV+ FP Sbjct: 187 QLDWRVIE-SDLQIPFVTSG--LEFVPLPVIHGEDYICLGFLFGRKSKVAYISDVSWFPP 243 Query: 193 ES 194 + Sbjct: 244 ST 245 >gi|302342366|ref|YP_003806895.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Desulfarculus baarsii DSM 2075] gi|301638979|gb|ADK84301.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Desulfarculus baarsii DSM 2075] Length = 310 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 95/253 (37%), Gaps = 34/253 (13%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G + G+P C + R R+ L +S + V++D GPD Sbjct: 2 ELCFLGTGGAWGLPEHACPCATCRRMRALGQHRGRAGLWLSTAA-----GGVLIDPGPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGL----RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q++ + DAVL +H H DH G+D L R Q RPI YA+ + + Sbjct: 57 RAQLMANDLPRPDAVLISHEHGDHFLGLDDLLCFRRAVAKDQWRPIPTYASEATWAAVEQ 116 Query: 121 SFRYCFKA-LDDRTYPP-------------IVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 F Y + L+ R P PI +++ P G + + L+ Sbjct: 117 RFGYLLPSLLEKRLCRPGQALEGAPMGPELACTPIKVDHGPFPK------GALGFVFDLR 170 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 Q GR LG+ + D +AF + Q FL A+ ++H SL +L Sbjct: 171 QDGRSLRLGYTGDMLRPQDDPDAFAGLDVLVCQ-CAFLNEPAVN---LANHLSLQAALPM 226 Query: 227 IELINPKNAILTH 239 + P H Sbjct: 227 LRRWTPGRVYFVH 239 >gi|330971989|gb|EGH72055.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 250 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 51/277 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC TN RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCVACAAARTNHDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + + G+ F Sbjct: 114 ILDFSQPFAAFERR----------------------ALGALQVTALPLTHSK-PTFGYLF 150 Query: 179 ----GNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ LD L++D + +H L+ +L+ IE Sbjct: 151 EGDGQRFAYLTDTVGLPDHTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEW 210 Query: 230 INPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGM 264 + P A+LTH+ LD ++ K P VV DGM Sbjct: 211 LRPGRAVLTHVGHTLDAWLMRHSKQLPGNVVVGRDGM 247 >gi|226356374|ref|YP_002786114.1| metallo-beta-lactamase family protein [Deinococcus deserti VCD115] gi|226318364|gb|ACO46360.1| putative Metallo-beta-lactamase superfamily protein [Deinococcus deserti VCD115] Length = 263 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 76/277 (27%), Positives = 116/277 (41%), Gaps = 38/277 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVPR C NRRTR+ L + R + TV+ D D Sbjct: 7 LTFLGTADSKGVPRFWCGCAVCTEARAGGCNRRTRTGLLL-----RAAGQTVLFDASADL 61 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + Q+ R E V+ DA L +H H DH+ G+ L Y + + VYA + + F Sbjct: 62 HAQLARLPEPVVP-DAALISHAHNDHLLGLGDLLDYVHYARGSLQVYAPQTTLPDIQARF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNV 181 Y F+A P+ + D + AG + A + HG S FR Sbjct: 121 AYAFRA---------SAPVRVLPED---GVMLAGLSLRAFQV--PHGANGQSHAFRLERP 166 Query: 182 AYC----TDVNAFPAE-SLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPK 233 + TD P+E + LQ+LD L++ A ++G S S+ + + +EL + Sbjct: 167 GWAAVIMTDAIDVPSEIAGVWLQDLDLLVLGTSFADESGSPRSGRSVYDIQEALELPWAR 226 Query: 234 NA---ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 A +LTH+ +D V+ P A+DG+ + Sbjct: 227 AAGRVVLTHLSHGVDARAVV--LPEGWSLAYDGLSVT 261 >gi|115454299|ref|NP_001050750.1| Os03g0642900 [Oryza sativa Japonica Group] gi|53749408|gb|AAU90266.1| hypothetical protein [Oryza sativa Japonica Group] gi|108710049|gb|ABF97844.1| phosphonate metabolism protein, putative [Oryza sativa Japonica Group] gi|113549221|dbj|BAF12664.1| Os03g0642900 [Oryza sativa Japonica Group] Length = 240 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 21/182 (11%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I + G++ +I+D G F QVLR ++ +++++ TH H Sbjct: 55 PEQNPNYRCNTSLLIDYCQDDGTHEYIIIDVGKTFREQVLRWFVHHKIPWVNSIILTHEH 114 Query: 86 ADHIHGIDGLRGYFLKQK------RPIDVYAAPDCMKHLFESFRYCFK----ALDDRTYP 135 AD + G+D + + ++ K R + ++ M + F Y K D+ + Sbjct: 115 ADAVLGLDDV--WMVQPKGCSNDFRRVPIFLTQFTMDSVVARFPYLLKNKLEEGDEVSQV 172 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPA 192 ++ +IE D+ S+G +P++ G I LGF FG +AY +DV+ F Sbjct: 173 AQLDWRIIE-GDIDKPFVSSGLEFVPLPVMHGEGNI-CLGFLFGRKAKIAYLSDVSRFLP 230 Query: 193 ES 194 E+ Sbjct: 231 ET 232 >gi|14520773|ref|NP_126248.1| atp-binding protein phnp (phnp) [Pyrococcus abyssi GE5] gi|5457989|emb|CAB49479.1| Alkylphosphonate uptake/carbon-phosphorus lyase, membrane bound subunit, phnP homolog [Pyrococcus abyssi GE5] Length = 249 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 43/271 (15%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S G+P + +C+ R ++ + +G V++D G D + Sbjct: 6 IGTGGSEGIPVHLCNCRSCNEARKFGFAQRRPSTLAIIGNKGE--VVLIDVGTD-----I 58 Query: 70 REQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 RE + + IDA+ TH H DHI+G+ LR R ++YA L Sbjct: 59 REFLNTPIDAIFLTHWHHDHIYGLYKLRWI----ARETELYAPRGHADALI--------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L D P + P +I D +K G I A+ + Q + +LG+ NVA Sbjct: 106 LQD---PKNLKPNIIRAGD---KIKINGLKITAVKLNHQ---VETLGYIIEENGKNVAVL 156 Query: 185 TDVNAFPAES---LEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 D P E+ LEKL L I+DA G + + + + ++ + + +L+H+ Sbjct: 157 YDTKGLPRETEIILEKLSPLRLAIVDATYPPGFNDPYHNNVDEAGEMGIKYAERVVLSHI 216 Query: 241 -HVDLDY----DMVLKSTPSRVVPAFDGMQF 266 H +L + + V + RV+ A+DGM F Sbjct: 217 SHKNLPFLELVNYVRRKWDDRVLVAYDGMVF 247 >gi|328857805|gb|EGG06920.1| Hypothetical protein MELLADRAFT_124039 [Melampsora larici-populina 98AG31] Length = 430 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 44/228 (19%) Query: 48 SERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +E+ + T+++D G F L R + IDAVL THPHAD G+D LR + Sbjct: 124 NEKATPKTILIDAGKSFQTSALELFKRNGLSKIDAVLLTHPHADASLGLDDLRSW-TSGA 182 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYP------PIVNPIVIENNDVPICMKSAGG 157 PI A C + F + + F + D + P + E + P+ + Sbjct: 183 NPIQKTMAIYCDQDTFLTIKQMFPYMIDPSTATGGGSVPTFQWNIFE-REKPLDLFG--- 238 Query: 158 VIEAIPILQQHGRISS---------LGFRFG-NVAYCTDVNAFPAESLEKLQNLD----- 202 + P+ HG + GF F ++ Y +DV++ P + L +L Sbjct: 239 -LRVTPLTTHHGTVGQGQDARPYECAGFLFDRSIVYMSDVSSIPESTWTALASLGVPSSI 297 Query: 203 -------------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 L+ID L+ SHF + ++L + + L Sbjct: 298 PSETHPQPRPSLPILVIDTLRLVTRPSHFGIEDALNTAHRLGAQKTYL 345 >gi|297609349|ref|NP_001062995.2| Os09g0363800 [Oryza sativa Japonica Group] gi|255678837|dbj|BAF24909.2| Os09g0363800 [Oryza sativa Japonica Group] Length = 377 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 38/209 (18%) Query: 2 KDYYHFTILGCGASLGVPRITGDWG---------------------ACDPTNPKNRRTRS 40 + LG G S G+PR++ A +P N +NRR + Sbjct: 94 RQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVRPPSSLQQRDVCTKAAEPGN-RNRRRNT 152 Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLR 96 S+ + + G+ +++D G FY L+ + +IDAV+ TH HAD I G+D LR Sbjct: 153 SILLRHATPSGT-ANILIDAGKFFYHSALQWFPAYGLRTIDAVIITHSHADAIGGLDCLR 211 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMK 153 + + I +Y A + + + Y +D P ++ N + P + Sbjct: 212 DWTNNVQPTIPIYVAERDYEVMKMTHYYL---IDTSVVIPGAAVSALQFNIIKEEPFTVH 268 Query: 154 SAGGVIEAIPILQQHGR-ISSLGFRFGNV 181 + +E IP+ HG+ SLGFRFG Sbjct: 269 N----LEVIPLPVWHGQGYRSLGFRFGRA 293 >gi|149926105|ref|ZP_01914368.1| carbon-phosphorus lyase complex accessory protein [Limnobacter sp. MED105] gi|149825393|gb|EDM84604.1| carbon-phosphorus lyase complex accessory protein [Limnobacter sp. MED105] Length = 255 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 73/261 (27%), Positives = 106/261 (40%), Gaps = 44/261 (16%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GA+ GVPR + AC+ +N R S + E +T V++D G M Sbjct: 4 TYLGTGAAGGVPRYGCNCAACE--RAQNNRVFVRRPCSALIED-EDTRVVLDAG---LMN 57 Query: 68 VL-REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + R + S A++ TH H DH+ G+ LR Q + VY PD E F Sbjct: 58 LHDRFPLGSYSAIVLTHFHPDHVQGLFHLRWGVSGQ---VPVYCPPDS-----EGCADLF 109 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-------SLGFRFG 179 K +P ++E G + P+ H +++ G RF Sbjct: 110 K-----------HPGILEFKPQTKFEPFQIGSLTFTPLPLIHSKVTFGYLIENRQGVRF- 157 Query: 180 NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALK------NGLHSSHFSLSESLKKIELIN 231 AY TD P ++LE LQ N L IDA +H +++L IE I Sbjct: 158 --AYLTDTVGLPPKTLELLQQSNPQGLAIDATDPPSNNVGAPGGNHNDWNQALALIEQIK 215 Query: 232 PKNAILTHMHVDLDYDMVLKS 252 P A LTH++ D +L + Sbjct: 216 PVRAWLTHLNHRSDTWQMLNN 236 >gi|251778660|ref|ZP_04821580.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082975|gb|EES48865.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 359 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 21/193 (10%) Query: 53 NTTVIVDTG--PDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 N +++D G + + L+ Q +S +D ++ THPH DHI G+ + F I + Sbjct: 66 NQNILIDAGCNDNKALNYLKSQGISKLDYIIATHPHEDHIGGMTSVINNF-----EIGEF 120 Query: 110 AAPDCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 AP + H ++F KAL ++ T P I + + I N + ++ + L Sbjct: 121 YAPK-VNHTTKTFENMIKALQNKGLKLTAPTIGDTLTIGNATMQFLAPNSSKYQD----L 175 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 + + L ++GN +Y +A E L + D LK G H SH S S++ Sbjct: 176 NNYSIVCKL--KYGNTSYLFTGDAESLSEGEILAKQLDISADVLKLGHHGSHSSTSQAF- 232 Query: 226 KIELINPKNAILT 238 ++ +NPK AI++ Sbjct: 233 -LDKVNPKYAIVS 244 >gi|331007766|ref|ZP_08330888.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] gi|330418426|gb|EGG92970.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] Length = 255 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 38/260 (14%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPD 63 F LG G + VP AC+ RR S KI +V E+ +++D G Sbjct: 2 QFQFLGTGNAAQVPCYGCRCPACERAMNVTTFRRGPCSAKI-QVGEK----NILIDAGHT 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + R V +I+ +L TH H DH+ G+ LR + PI V PD + + F+ Sbjct: 57 NLTE--RFPVGTINTILLTHYHMDHVQGLFPLR---WGKATPIPVI-GPDDKEGCDDLFK 110 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFGN-- 180 + P ++ P C K + IE P+ H + ++G+ F + Sbjct: 111 H---------------PGMLHFLPAPECFKPLYLLGIEITPVPLNHSK-PTVGYFFNDGE 154 Query: 181 --VAYCTDVNAFPAESLEKLQNL--DFLIIDALKNGLHS--SHFSLSESLKKIELINPKN 234 +AY TD P ++++ LQ D +IID + +H +L+E+L IE + P+ Sbjct: 155 SSLAYLTDTLGLPEKTMDFLQQQRPDIVIIDCSSPPKPNPRNHNTLNEALDIIEHLAPQK 214 Query: 235 AILTHMHVDLDYDMVLKSTP 254 LTH+ +LD ++ + P Sbjct: 215 GYLTHISHELDAFLLSANYP 234 >gi|66045499|ref|YP_235340.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. syringae B728a] gi|63256206|gb|AAY37302.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] Length = 250 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 38/205 (18%) Query: 75 SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALD 130 S+ +L TH HADH G+ LR G + P D D KH F F A + Sbjct: 66 SLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFE 125 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 R A G ++ + H + + G+ F AY TD Sbjct: 126 RR----------------------ALGALQVTALPLTHSK-PTFGYLFEGDGQRFAYLTD 162 Query: 187 VNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P ++ E LQ LD L++D + +H L+ +L+ IE + P A+LTH+ Sbjct: 163 TVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVG 222 Query: 242 VDLDYDMV--LKSTPSRVVPAFDGM 264 LD ++ K P VV DGM Sbjct: 223 HTLDAWLMEHSKQLPGNVVVGRDGM 247 >gi|146307900|ref|YP_001188365.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas mendocina ymp] gi|145576101|gb|ABP85633.1| beta-lactamase domain protein [Pseudomonas mendocina ymp] Length = 254 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 73/275 (26%), Positives = 109/275 (39%), Gaps = 41/275 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP ACD P RR I ++R ++D+G Sbjct: 3 LTLLGTGDARQVPVYNCSCPACDAARVYPARRRGPCCALIECGAQR-----WLIDSG--- 54 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFAPHSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPDDPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R + + + P + G + E + Q RI Sbjct: 114 ILDFSQPFAAFERRQLGELNVTALPLTHSKP----TFGYLFEGLGFEGQGRRI------- 162 Query: 179 GNVAYCTDVNAFPAESLEKLQN--LDFLIID---ALKNGLHSSHFSLSESLKKIELINPK 233 AY TD P S +LQ LD L++D A + +H L+ +L+ + + P Sbjct: 163 ---AYLTDTVGVPEASCAELQRAPLDLLVLDCSTAPQPVAPRNHNDLTRALEVVARLQPT 219 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 A+LT H+ +D L P + P G+Q +S Sbjct: 220 QAVLT--HIGHAFDAWLLEHPDALPP---GVQLAS 249 >gi|221485392|gb|EEE23673.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 775 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 9/95 (9%) Query: 159 IEAIPILQQHGRI-SSLGFRFG---NVAYCTDVNAFPAESLEKLQ---NLDFLIIDALKN 211 I + P+ HG + SLGF G + Y +DV +FP L +L+ +++ L++DA+ Sbjct: 639 IHSFPVF--HGGVYVSLGFLVGAREKLVYISDVTSFPPPVLRRLRQIPDIETLVVDAIGE 696 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 LH++HFSL E+L L+ P+ M L++ Sbjct: 697 KLHNAHFSLQEALALAVLLQPRKVFFVGMSCSLEH 731 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Query: 34 KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHI 89 +NRR S + +R +++D G F L Q+ ++DAVL TH H D + Sbjct: 273 ENRRNNVSAVLRIAGKR-----ILIDCGKTFRQAALAYFPLHQITTLDAVLLTHDHQDAV 327 Query: 90 HGIDGLR 96 GID LR Sbjct: 328 GGIDDLR 334 >gi|237835551|ref|XP_002367073.1| hydrolase-like protein [Toxoplasma gondii ME49] gi|211964737|gb|EEA99932.1| hydrolase-like protein [Toxoplasma gondii ME49] gi|221506254|gb|EEE31889.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 775 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 9/95 (9%) Query: 159 IEAIPILQQHGRI-SSLGFRFG---NVAYCTDVNAFPAESLEKLQ---NLDFLIIDALKN 211 I + P+ HG + SLGF G + Y +DV +FP L +L+ +++ L++DA+ Sbjct: 639 IHSFPVF--HGGVYVSLGFLVGAREKLVYISDVTSFPPPVLRRLRQIPDIETLVVDAIGE 696 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 LH++HFSL E+L L+ P+ M L++ Sbjct: 697 KLHNAHFSLQEALALAVLLQPRKVFFVGMSCSLEH 731 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Query: 34 KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHI 89 +NRR S + +R +++D G F L Q+ ++DAVL TH H D + Sbjct: 273 ENRRNNVSAVLRIAGKR-----ILIDCGKTFRQAALAYFPLHQITTLDAVLLTHDHQDAV 327 Query: 90 HGIDGLR 96 GID LR Sbjct: 328 GGIDDLR 334 >gi|330888448|gb|EGH21109.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. mori str. 301020] Length = 249 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 76/279 (27%), Positives = 108/279 (38%), Gaps = 51/279 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + +LG+ F Sbjct: 114 ILDFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTLGYMF 150 Query: 179 GN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ Sbjct: 151 EGDGRRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQ 210 Query: 230 INPKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGMQF 266 + P A+LTH+ LD + M L P V+ DGM Sbjct: 211 LRPGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|328855342|gb|EGG04469.1| Hypothetical protein MELLADRAFT_78359 [Melampsora larici-populina 98AG31] Length = 410 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 41/159 (25%) Query: 9 ILGCGASLGVPRIT---GDWGAC-------DPTNPKN--RRTRSSLKISRVSERGSNT-- 54 ILG G S VP I+ AC PT KN R T + L+I+ S + + Sbjct: 8 ILGSGTSSQVPVISCLISKDKACTCCLSTRSPTGSKNIRRNTSAILRITNPSNQSTQNDQ 67 Query: 55 -------TVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 T+++D G F + R+ ++ +IDAVL THPHAD I+G+D LR + L Sbjct: 68 NPMTTPKTILIDVGKSF-CEAARQHFPINELSTIDAVLLTHPHADAINGLDDLRAWTLDA 126 Query: 103 --KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 + I +Y C K F +R +P +VN Sbjct: 127 VIQPSIPIY----CDKFTFSEV--------ERMFPYMVN 153 >gi|70950037|ref|XP_744375.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524305|emb|CAH79792.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 425 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 24/126 (19%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPH 85 N KN+R S+ + + +N+ V++D G F +L ++++AVL +H H Sbjct: 97 NSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILSNNDKINFSEVNLEAVLISHSH 151 Query: 86 ADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKA-LDDR 132 D ++GID LR Y+ + K+PIDVY L F Y K ++R Sbjct: 152 TDAMNGIDDLRDLQEYERVSYGDVYYYRSKKPIDVYLNSVSYDRLRNGFEYLAKERTENR 211 Query: 133 TYPPIV 138 Y + Sbjct: 212 FYSKVA 217 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 10/99 (10%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALK- 210 I IP QHG+ +G+ GN ++ C V+ + + ++K +D L+IDAL Sbjct: 300 IRFIPF--QHGKNYVCVGYIVGNNHKLVYISDCNYVSTYVVDYIKKFAPIDILVIDALYY 357 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 H SHFSL ES++ LI PK M D+++++ Sbjct: 358 KSKHYSHFSLYESIQFSLLIKPKQVYFIGMSCDVEHNIT 396 >gi|237800944|ref|ZP_04589405.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023800|gb|EGI03857.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 250 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 105/275 (38%), Gaps = 47/275 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP + AC RR S I +R ++D+G + Sbjct: 3 LTLLGTGDARQVPVYGCNCMACSAARDDQDLRRLPCSALIECADQR-----WLIDSGLND 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 + LS +L TH HADH G+ LR G + P D D KH Sbjct: 58 LTERFPPHSLS--GILQTHYHADHAQGLLHLRWGQGLIIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 F F A + R+ G ++ + H R + G+ F Sbjct: 116 DFSQPFAAFETRSL----------------------GAMQVTALPLTHSR-PTFGYLFEG 152 Query: 179 --GNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 +AY TD P + E LQ LD L++D + +H L+ +L+ I+ + Sbjct: 153 DGQRIAYLTDTVGLPDVTREFLQRQPLDVLVLDCSMPPQPQPPRNHNDLTLALESIDQLR 212 Query: 232 PKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGM 264 P A+LTH+ LD ++ + P VV D M Sbjct: 213 PGKAVLTHIGHTLDAWLMTQPRELPGNVVVGRDAM 247 >gi|242398194|ref|YP_002993618.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] gi|242264587|gb|ACS89269.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] Length = 260 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 16/118 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY- 65 +LG G+ G P+ + C P+ RRTR S+ I +++ ++D PD Y Sbjct: 14 LLGSGSYSGTPKALCECENCSRARRFPQYRRTRFSMYIPQIN-------ALIDPSPDLYY 66 Query: 66 -MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 M L E+ I+ V THPH DHI G+ L+ K+ R D KHL E+F Sbjct: 67 HMSYLNER---IENVFITHPHFDHIGGLPELQ--VFKKVRFYSHKKILDLAKHLQETF 119 >gi|328857734|gb|EGG06849.1| Hypothetical protein MELLADRAFT_124040 [Melampsora larici-populina 98AG31] Length = 429 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 98/256 (38%), Gaps = 56/256 (21%) Query: 49 ERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ + T+++D G F L ++ IDAVL THPHAD I G+D LR + R Sbjct: 117 QKSTPKTILIDVGKSFRNAALEFFPPNKLSKIDAVLLTHPHADAIFGLDDLRPWTANAHR 176 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYP---------PIVNPIVIENNDVPICMK 153 I C +H F F + T+P P + E D P+ + Sbjct: 177 NKAIQKTVPIYCDQHTFLEINRMFPYM---THPSSATGGGHVPAFEWHIFE-KDKPLDLF 232 Query: 154 SAGGVIEAIPILQQHGRI---------SSLGFRFG-NVAYCTDVNAFPAESLEKLQNLD- 202 + P+ HG + GF F ++ Y +DV++ P + L +L Sbjct: 233 G----LHVTPLTAHHGTMGHGKDLRPHECAGFLFNRSILYMSDVSSIPESTWATLASLGV 288 Query: 203 -----------------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 L+ID L+ +SH + ++LK + K L V L+ Sbjct: 289 HNSMTSTAHLQSHLSLPILVIDTLRLTTRASHLGIGDALKVAHRLGAKRTYL----VGLE 344 Query: 246 YDMVLKSTPSRVVPAF 261 + + +S R AF Sbjct: 345 HGITHESW-ERACKAF 359 >gi|330428529|gb|AEC19863.1| carbon-phosphorus lyase complex accessory protein [Pusillimonas sp. T7-7] Length = 260 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/280 (27%), Positives = 117/280 (41%), Gaps = 43/280 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC T ++RR S + S+R +VD G Sbjct: 3 LTLLGTGNAGQVPVYNCFCAACARARTQSQHRRGPCSALLEFGSQR-----WLVDAG--- 54 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + L E+ S++ V+ TH HADH G+ LR Q + V PD + L + + Sbjct: 55 -LTDLAERFPPGSLNGVIQTHYHADHAQGLLHLR---WGQNMRLPVLGPPD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICM----KSAGGVIEAIPILQQHGRISSLGFRF 178 ++ RT V + E P+ + + G V EA G RF Sbjct: 110 KHPGILDFSRTLEAFVTTELGECAITPVPLVHSKMTYGYVFEAE------------GQRF 157 Query: 179 GNVAYCTDVNAFPAESLEKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPK 233 AY TD P ++ L Q LD L++D A +H L+ +L+ I +N K Sbjct: 158 ---AYLTDTVGLPPDTQAYLARQPLDMLVLDCSFAPAATAPRNHNDLNRALETIASLNVK 214 Query: 234 NAILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSSPIP 271 A+LTH+ LD ++ ++ P VV DG F + P Sbjct: 215 QAVLTHISHALDVWLMDEAHVLPEGVVVGHDGAVFGNTAP 254 >gi|72391292|ref|XP_845940.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175266|gb|AAX69411.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802476|gb|AAZ12381.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 391 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 85/324 (26%) Query: 8 TILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSE-RGSNTT---- 55 TI+G G S GVP I C DP P R S L R +E GS++ Sbjct: 27 TIVGSGVSTGVPVIGHLSSDCACAEAFRDPQGPDRRNNVSLLITVRDAECTGSDSEDDRN 86 Query: 56 ---VIVDTGPDF---YMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQ 102 V++D G F Y +VL + +V +D +L TH HAD G+D LR + + Sbjct: 87 AKHVLIDCGKTFRDAYFRVLAKHKVRYLDGLLLTHDHADAAGGVDDLRDLQRVTVDDVSK 146 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI------------ 150 I+ Y + + ES R F + ++ P E +++ + Sbjct: 147 CCTIEQYISTYASEKTIESLRQQFGYIVRNSWLMGPAPSTAEEHELVVKRMREDREREGQ 206 Query: 151 -----CMKSAG-----------------GVIEAIPILQ---QHGR-ISSLGFRFGN---- 180 +SA G E P+ +HG+ SLGF FG Sbjct: 207 TDNIGYRRSAALHLYTLPDTYPSSFYIPGFGENFPMYALPVEHGKGYMSLGFVFGRGVAL 266 Query: 181 -------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHFSLSE 222 V Y +DV+ P ++ L++L D L +D L H SH+ + + Sbjct: 267 RSTGASSCNGYSCVVYLSDVSEIPPNAMSFLRDLVKIDVLFVDMLYGPEVSHPSHYCMDD 326 Query: 223 SLKKIELINPKNAILTHMHVDLDY 246 +L+ + + P M+ D+ + Sbjct: 327 TLQLVCELQPARTYAIGMYCDIKH 350 >gi|124262972|ref|YP_001023442.1| carbon-phosphorus lyase complex accessory protein [Methylibium petroleiphilum PM1] gi|124263006|ref|YP_001023476.1| carbon-phosphorus lyase complex accessory protein [Methylibium petroleiphilum PM1] gi|124262218|gb|ABM97207.1| phosphonate metabolism protein [Methylibium petroleiphilum PM1] gi|124262252|gb|ABM97241.1| phosphonate metabolism protein [Methylibium petroleiphilum PM1] Length = 260 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 112/279 (40%), Gaps = 51/279 (18%) Query: 8 TILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG GA+ GVP AC+ +P R S I + T V+VD G Sbjct: 4 TFLGTGAAGGVPLYGCTCVACERAARDPSRMRRPCSALIEH-----AGTRVLVDAG---- 54 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + L E+ + ++DA++ TH H DH+ G+ LR + PI V+A PD E Sbjct: 55 LTDLHERFVPGALDAIVLTHFHPDHVQGLFHLR---WGRGAPIPVHAPPDA-----EGCA 106 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-------ISSLGF 176 +K +P +++ + G + P+ H + + G Sbjct: 107 DLYK-----------HPGLLDFQRLAKLEPQRIGALSFTPLPLVHSKPTFGYAVQAEDGA 155 Query: 177 RFGNVAYCTDVNAFPAESLEKLQ--NLDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 RF AY TD P ++ LQ D L +D + H +L IE + Sbjct: 156 RF---AYLTDTLGLPPQTETFLQAWQADGLALDCSFPPQEAPPRGHNDWPMALDTIERVA 212 Query: 232 PKNAILTHMHVDLDYDMVLKSTPS---RVVPAFDGMQFS 267 P+ A LTH+ LD M +++ P+ V A DG Q Sbjct: 213 PRRAWLTHIGHALDAWM-MQTNPALAGNVSVARDGEQIE 250 >gi|257486033|ref|ZP_05640074.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010392|gb|EGH90448.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 249 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 108/279 (38%), Gaps = 51/279 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S++ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLNGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + + G+ F Sbjct: 114 ILDFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTFGYMF 150 Query: 179 GN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ Sbjct: 151 EGDGQRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQ 210 Query: 230 INPKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGMQF 266 + P A+LTH+ LD + M L P V+ DGM Sbjct: 211 LRPGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|257053280|ref|YP_003131113.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692043|gb|ACV12380.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 292 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 11/98 (11%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 RTR S+ + +ER ++ T+++D PDF Q LRE + + DA + +H H DH+ G+ Sbjct: 52 RTRFSVHVR--NER-TDETLLIDASPDFRTQFLREDLDAPDAAVISHVHFDHLDGL---- 104 Query: 97 GYFLKQKRPIDVYAA----PDCMKHLFESFRYCFKALD 130 G F + R + VYAA P + + +S R + LD Sbjct: 105 GNFYRLTRDMPVYAAGEVDPATGQSVAQSVRERYDYLD 142 >gi|71737415|ref|YP_275109.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557968|gb|AAZ37179.1| phosphonate metabolism protein PhnP [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323605|gb|EFW79689.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328239|gb|EFW84243.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 253 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 75/281 (26%), Positives = 108/281 (38%), Gaps = 51/281 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + + G+ F Sbjct: 114 ILDFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTFGYMF 150 Query: 179 GN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ Sbjct: 151 EGDGQRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQ 210 Query: 230 INPKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGMQFSS 268 + P A+LTH+ LD + M L P V+ DGM + Sbjct: 211 LRPGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMALQA 251 >gi|167533790|ref|XP_001748574.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773093|gb|EDQ86738.1| predicted protein [Monosiga brevicollis MX1] Length = 1044 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 18/108 (16%) Query: 7 FTILGCGASLGVPRI------TGDWGACD-----PTNP--KNRRTRSSLKIS-RVSERGS 52 +LG G S VP I G+ C TNP +N+RT S+ + + +E Sbjct: 696 LVLLGTGPSTCVPNIGCLLGLRGERSPCAVCKEAHTNPISRNKRTNPSMLLQYKAAEADE 755 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLR 96 T ++ D G F QV R +V +DA+L TH HAD + G+D LR Sbjct: 756 YTNILFDCGKTFRSQVERFFPKFEVKGLDAILLTHDHADAVLGLDDLR 803 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 21/93 (22%) Query: 159 IEAIPILQQHGRIS-SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 +E P+ HG +LGF FG VAY +D N PA ++ K Sbjct: 936 LEVKPLRLHHGGTYLALGFLFGAHGTRVAYLSDTNGLPARTMRK---------------- 979 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H++HFSL +SL+ I + PK L M + +Y Sbjct: 980 HTTHFSLPQSLELIRELRPKQTYLVGMSHEFNY 1012 >gi|261329426|emb|CBH12407.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 391 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 79/324 (24%), Positives = 121/324 (37%), Gaps = 85/324 (26%) Query: 8 TILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSE-RGSNTT---- 55 TI+G G S GVP I C DP P R S L R +E GS++ Sbjct: 27 TIVGSGVSTGVPVIGHLSSDCACAEAFRDPQGPDRRNNVSLLITVRDAECTGSDSEDDRN 86 Query: 56 ---VIVDTGPDF---YMQVL-REQVLSIDAVLYTHPHADHIHGIDGLR----------GY 98 V++D G F Y +VL + +V +D +L TH HAD G+D LR Sbjct: 87 AKHVLIDCGKTFRDAYFRVLAKHKVRYLDGLLLTHDHADAAGGVDDLRDLQRVTVDDASK 146 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFK-------ALDDRTYPPIVNPIVIENNDVPIC 151 ++ I YA+ ++ L + F Y + A +V V E+ + Sbjct: 147 CCTIEQYISTYASEKTIESLRQQFGYIVRNSWLMGPAPTTAEEHELVVKRVREDREREGQ 206 Query: 152 MKSAG-----------------------GVIEAIPILQ---QHGR-ISSLGFRFGN---- 180 + G G E P+ +HG+ SLGF FG Sbjct: 207 TDNIGYRRSAALHLYTLPDTHPSSFYIPGFGENFPMYALPVEHGKGYMSLGFVFGRGVAL 266 Query: 181 -------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHFSLSE 222 V Y +DV+ P ++ L +L D L +D L H SH+ + + Sbjct: 267 RSTGASSCNGYSCVVYLSDVSEIPPNAMSFLHDLVKIDVLFVDMLYGPEVSHPSHYCMDD 326 Query: 223 SLKKIELINPKNAILTHMHVDLDY 246 +L+ + + P M+ D+ + Sbjct: 327 TLQLVCELQPARTYAIGMYCDIKH 350 >gi|28869758|ref|NP_792377.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato str. DC3000] gi|28853003|gb|AAO56072.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato str. DC3000] Length = 249 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 103/277 (37%), Gaps = 47/277 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R + + D F Sbjct: 3 LTLLGTGDARQVPVYGCQCVACSAAQANQDLRRLPCSALIECAGQRWLIDSGLTDLTERF 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 + S++ +L TH HADH G+ LR G + P D D KH Sbjct: 63 PPR-------SLNGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R A G + + H R + G+ Sbjct: 116 DFSQPFAAFETR----------------------ALGELHVTALPLAHSR-PTFGYLLEG 152 Query: 181 ----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 VAY TD P + E LQ LD LI+D + +H L+ +L+ I+ + Sbjct: 153 DGQRVAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLR 212 Query: 232 PKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 P A+LTH+ LD ++ + P V+ DGM Sbjct: 213 PAKAVLTHIGHTLDAWLMEPPQRLPGHVLIGRDGMTL 249 >gi|295113177|emb|CBL31814.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Enterococcus sp. 7L76] Length = 276 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R Y ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLYYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHILLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYTEMAALSQKHEIITSYDGLE 273 >gi|289673430|ref|ZP_06494320.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. syringae FF5] Length = 218 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 38/205 (18%) Query: 75 SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALD 130 S+ +L TH HADH G+ LR G + P D D KH F F A + Sbjct: 34 SLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFE 93 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 R A G ++ + H + + G+ F AY TD Sbjct: 94 RR----------------------ALGALQVTALPLAHSK-PTFGYLFEGDGQRFAYLTD 130 Query: 187 VNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P ++ E LQ LD L++D + +H L+ +L+ IE + P A+LTH+ Sbjct: 131 TVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVG 190 Query: 242 VDLDYDMVLKS--TPSRVVPAFDGM 264 LD ++ S P VV DG+ Sbjct: 191 HTLDAWLMEHSGQLPGNVVVGRDGI 215 >gi|213971298|ref|ZP_03399414.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato T1] gi|301385067|ref|ZP_07233485.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato Max13] gi|302059146|ref|ZP_07250687.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato K40] gi|302131438|ref|ZP_07257428.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923943|gb|EEB57522.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato T1] Length = 249 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 72/277 (25%), Positives = 103/277 (37%), Gaps = 47/277 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R + + D F Sbjct: 3 LTLLGTGDARQVPVYGCQCVACSAAQANQDLRRLPCSALIECADQRWLIDSGLTDLTERF 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 + S++ +L TH HADH G+ LR G + P D D KH Sbjct: 63 PPR-------SLNGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R A G + + H R + G+ Sbjct: 116 DFSQPFAAFETR----------------------ALGELHVTALPLAHSR-PTFGYLLEG 152 Query: 181 ----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 VAY TD P + E LQ LD LI+D + +H L+ +L+ I+ + Sbjct: 153 DGQRVAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLR 212 Query: 232 PKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 P A+LTH+ LD ++ + P V+ DGM Sbjct: 213 PAKAVLTHIGHTLDAWLMEPPQRLPGNVLIGRDGMTL 249 >gi|298487394|ref|ZP_07005441.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158079|gb|EFH99152.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 249 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 107/277 (38%), Gaps = 51/277 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + + G+ F Sbjct: 114 ILDFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTFGYMF 150 Query: 179 GN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ Sbjct: 151 EGDGQRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQ 210 Query: 230 INPKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGM 264 + P A+LTH+ LD + M L P V+ DGM Sbjct: 211 LRPGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGM 247 >gi|22124633|ref|NP_668056.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis KIM 10] gi|45440471|ref|NP_992010.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis biovar Microtus str. 91001] gi|51594860|ref|YP_069051.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis IP 32953] gi|108808958|ref|YP_652874.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Antiqua] gi|108810787|ref|YP_646554.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Nepal516] gi|145600529|ref|YP_001164605.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Pestoides F] gi|153997495|ref|ZP_02022595.1| PhnP protein [Yersinia pestis CA88-4125] gi|162418243|ref|YP_001608316.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Angola] gi|165925685|ref|ZP_02221517.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. F1991016] gi|165936631|ref|ZP_02225198.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. IP275] gi|166010196|ref|ZP_02231094.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. E1979001] gi|166214290|ref|ZP_02240325.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. B42003004] gi|167399439|ref|ZP_02304963.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420604|ref|ZP_02312357.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423640|ref|ZP_02315393.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467364|ref|ZP_02332068.1| phosphonate metabolism protein PhnP [Yersinia pestis FV-1] gi|186893869|ref|YP_001870981.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis PB1/+] gi|218930479|ref|YP_002348354.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis CO92] gi|229839114|ref|ZP_04459273.1| PhnP protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896602|ref|ZP_04511769.1| PhnP protein [Yersinia pestis Pestoides A] gi|229899678|ref|ZP_04514819.1| PhnP protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900987|ref|ZP_04516111.1| PhnP protein [Yersinia pestis Nepal516] gi|294505169|ref|YP_003569231.1| PhnP protein [Yersinia pestis Z176003] gi|21957440|gb|AAM84307.1|AE013674_3 phosphonate metabolism [Yersinia pestis KIM 10] gi|45435328|gb|AAS60887.1| PhnP protein [Yersinia pestis biovar Microtus str. 91001] gi|51588142|emb|CAH19748.1| PhnP protein [Yersinia pseudotuberculosis IP 32953] gi|108774435|gb|ABG16954.1| PhnP protein [Yersinia pestis Nepal516] gi|108780871|gb|ABG14929.1| PhnP protein [Yersinia pestis Antiqua] gi|115349090|emb|CAL22053.1| PhnP protein [Yersinia pestis CO92] gi|145212225|gb|ABP41632.1| PhnP protein [Yersinia pestis Pestoides F] gi|149289132|gb|EDM39212.1| PhnP protein [Yersinia pestis CA88-4125] gi|162351058|gb|ABX85006.1| phosphonate metabolism protein PhnP [Yersinia pestis Angola] gi|165915280|gb|EDR33890.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. IP275] gi|165922297|gb|EDR39474.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. F1991016] gi|165991103|gb|EDR43404.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. E1979001] gi|166204522|gb|EDR49002.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. B42003004] gi|166961410|gb|EDR57431.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051943|gb|EDR63351.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057810|gb|EDR67556.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186696895|gb|ACC87524.1| phosphonate metabolism protein PhnP [Yersinia pseudotuberculosis PB1/+] gi|229682326|gb|EEO78418.1| PhnP protein [Yersinia pestis Nepal516] gi|229687170|gb|EEO79245.1| PhnP protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695480|gb|EEO85527.1| PhnP protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700380|gb|EEO88412.1| PhnP protein [Yersinia pestis Pestoides A] gi|262363231|gb|ACY59952.1| PhnP protein [Yersinia pestis D106004] gi|262367162|gb|ACY63719.1| PhnP protein [Yersinia pestis D182038] gi|294355628|gb|ADE65969.1| PhnP protein [Yersinia pestis Z176003] gi|320016670|gb|ADW00242.1| PhnP protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 250 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 41/270 (15%) Query: 6 HFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G + VP D C +P RR S + E T ++D G Sbjct: 2 QLTLLGTGCAQQVPVFGCDCVICTQASVDPARRRKPCSAMLYYQGE-----TTLIDAGLP 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q R I L TH H DH+ G+ LR + K P VY PD + + F+ Sbjct: 57 TLDQQFRAG--EIQRFLLTHYHMDHVQGLFPLR-WGCGNKIP--VYGPPD-LDGCDDLFK 110 Query: 124 YCFKALDDRTYPPIV--NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + LD R PP+ P+ G + P+ H +I+ G+ + Sbjct: 111 HP-GILDFR--PPLTAFQPLQF-------------GELRVTPVPLVHSKIT-FGYLLQSP 153 Query: 181 ---VAYCTDVNAFPAESLEKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 +AY TD A+S L +++D L++D A ++ +H ++ +L +L+ P Sbjct: 154 NRAIAYLTDTVGLSADSALFLASKSIDLLVLDCSHAPQSPPPRNHNDVTMALAIRDLLMP 213 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 + +LTH LD ++ S P+ V A+D Sbjct: 214 EETLLTHASHQLDRWLLNNSLPTGVSVAYD 243 >gi|330986082|gb|EGH84185.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 249 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 75/277 (27%), Positives = 107/277 (38%), Gaps = 47/277 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G + VP AC R L S + E G +I D+G + Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRR--LPCSALIECGDQRWLI-DSG----L 55 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 L E+ S++ +L TH HADH G+ LR G + P D D KH Sbjct: 56 TDLTERFPPRSLNGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F F A + R A G ++ + H + + G+ F Sbjct: 116 DFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTFGYMFEG 152 Query: 181 ----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + Sbjct: 153 DGQRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLR 212 Query: 232 PKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGMQF 266 P A+LTH+ LD + M L P V+ DGM Sbjct: 213 PGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|251790272|ref|YP_003004993.1| phosphonate metabolism protein PhnP [Dickeya zeae Ech1591] gi|247538893|gb|ACT07514.1| phosphonate metabolism protein PhnP [Dickeya zeae Ech1591] Length = 249 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 24/197 (12%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 I +L TH H DH+ G+ LR + + + P V+ PD + + + LD + Sbjct: 66 EIRRILLTHYHVDHVQGLFSLR-WGIGDRIP--VFGPPD--EQGCDDLYKHPRRLD---F 117 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPA 192 P + P M + A+P+ L GN VAY TD P Sbjct: 118 QPAMTPFQT--------MTMGAMQVTALPLTHSRPTFGYL-LEQGNHAVAYLTDTCGLPD 168 Query: 193 ESLEKLQN--LDFLIIDALKNGLHS---SHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 ++L+ L+ LD +++D + + +H L+ L+ EL+ P LTH+ + D Sbjct: 169 DTLDFLRGKRLDHMVMDCTQPPRDTPPLNHSDLNTVLRIRELLRPTQTWLTHLSHETDAW 228 Query: 248 MVLKSTPSRVVPAFDGM 264 ++ + P V A DGM Sbjct: 229 LMQNTLPDGVQAAADGM 245 >gi|315027970|gb|EFT39902.1| conserved hypothetical protein [Enterococcus faecalis TX2137] Length = 276 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY S Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRS 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLITE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|330958728|gb|EGH58988.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 249 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 70/275 (25%), Positives = 102/275 (37%), Gaps = 47/275 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC RR S I +R + + D F Sbjct: 3 LTLLGTGDARQVPVYGCQCVACLAARADQALRRLPCSALIECADQRWLIDSGLTDLTERF 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FE 120 S+ +L TH HADH G+ LR G + P D D KH Sbjct: 63 PPH-------SLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGIL 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 F F A + R A G ++ + H R+ + G+ Sbjct: 116 DFSQPFAAFETR----------------------ALGALQVTALPLMHSRL-TFGYLLEG 152 Query: 179 --GNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 +AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + Sbjct: 153 EGQRIAYLTDTVGLPDATREFLQRQPLDLLILDCSMPPQPQPPRNHNDLTLALETIDQLR 212 Query: 232 PKNAILTHMHVDLDYDMVLKST--PSRVVPAFDGM 264 P A+LTH+ LD ++ + P+ VV D M Sbjct: 213 PAKAVLTHIGHTLDAWLMERPQRLPNHVVVGRDAM 247 >gi|229589306|ref|YP_002871425.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas fluorescens SBW25] gi|229361172|emb|CAY48036.1| phosphorous compounds metabolism-related protein [Pseudomonas fluorescens SBW25] Length = 249 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/275 (25%), Positives = 109/275 (39%), Gaps = 49/275 (17%) Query: 7 FTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-PD 63 T+LG G + VP + AC ++ RR S I +R ++D+G PD Sbjct: 3 LTLLGTGDARQVPVYGCECPACGLARSDASLRRRPCSALIECADQR-----WLIDSGLPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-F 119 R S + +L TH HADH G+ LR G + P D D KH Sbjct: 58 L---TERFPPRSFNGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLSDLYKHPGI 114 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F F + R + P+ + A+P+ QH + +LG+ Sbjct: 115 LDFSQPFSEFETRQFGPL--------------------SVTALPL--QHSK-PTLGYLLE 151 Query: 180 N----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 +AY TD P +L LQ LD L++D + +H L+ +L+ IE Sbjct: 152 GEGRRIAYLTDTVGQPPATLAWLQREPLDVLVLDCSMPPQPQAPRNHNDLTLALQSIEDT 211 Query: 231 NPKNAILTHMHVDLDYDMV--LKSTPSRVVPAFDG 263 + +LTH+ LD ++ + P V +DG Sbjct: 212 GAQLGVLTHVGHTLDAWLLEHRRELPRHVSIGWDG 246 >gi|121605419|ref|YP_982748.1| carbon-phosphorus lyase complex accessory protein [Polaromonas naphthalenivorans CJ2] gi|120594388|gb|ABM37827.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 258 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 106/273 (38%), Gaps = 49/273 (17%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GA+ GVP AC+ + R S + E G NT +++D G + Sbjct: 4 TFLGTGAAGGVPLFGCRCVACERAHLAPAFVRR--PCSALIESG-NTRILLDAG----LT 56 Query: 68 VLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLFESF 122 L E+ +DA++ TH H DH+ G+ LR G L P D D KH Sbjct: 57 DLHERFAPGDLDAIVLTHFHPDHVQGLFHLRWGVGARLAVYGPPDSEGCADLYKH----- 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-------SLG 175 P V+E + + + G + P+ H +++ S G Sbjct: 112 -----------------PGVLEFHALTKFEPLSIGALTLTPVPLIHSKVTFGYAVAASTG 154 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNL--DFLIIDAL--KNGLHSSHFSLSESLKKIELIN 231 RF AY TD P + L + L +D +H + +L I+ +N Sbjct: 155 SRF---AYLTDTLGLPPRTETFLTDWHPHGLALDCSFPPQSEAKNHNDWTTALAVIDKVN 211 Query: 232 PKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDG 263 P+ A LTH+ LD + + SR A DG Sbjct: 212 PERAWLTHISHTLDAWLFGTGESSSRAAIAMDG 244 >gi|29376360|ref|NP_815514.1| hypothetical protein EF1816 [Enterococcus faecalis V583] gi|227519004|ref|ZP_03949053.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|256961686|ref|ZP_05565857.1| predicted protein [Enterococcus faecalis Merz96] gi|257082315|ref|ZP_05576676.1| hypothetical protein EFJG_00759 [Enterococcus faecalis E1Sol] gi|257084930|ref|ZP_05579291.1| predicted protein [Enterococcus faecalis Fly1] gi|293383391|ref|ZP_06629304.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293388956|ref|ZP_06633441.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|307289356|ref|ZP_07569311.1| hypothetical protein HMPREF9505_02726 [Enterococcus faecalis TX0109] gi|312901776|ref|ZP_07761044.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312907781|ref|ZP_07766772.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910399|ref|ZP_07769246.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|29343823|gb|AAO81584.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227073576|gb|EEI11539.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|256952182|gb|EEU68814.1| predicted protein [Enterococcus faecalis Merz96] gi|256990345|gb|EEU77647.1| hypothetical protein EFJG_00759 [Enterococcus faecalis E1Sol] gi|256992960|gb|EEU80262.1| predicted protein [Enterococcus faecalis Fly1] gi|291079182|gb|EFE16546.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081737|gb|EFE18700.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|306499723|gb|EFM69085.1| hypothetical protein HMPREF9505_02726 [Enterococcus faecalis TX0109] gi|310626809|gb|EFQ10092.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311289672|gb|EFQ68228.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311291111|gb|EFQ69667.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315163756|gb|EFU07773.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315575975|gb|EFU88166.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315580765|gb|EFU92956.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|323480970|gb|ADX80409.1| Lactamase_B super family protein [Enterococcus faecalis 62] gi|327535377|gb|AEA94211.1| hypothetical protein OG1RF_11524 [Enterococcus faecalis OG1RF] Length = 276 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|229549765|ref|ZP_04438490.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255972494|ref|ZP_05423080.1| predicted protein [Enterococcus faecalis T1] gi|312950924|ref|ZP_07769834.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229305034|gb|EEN71030.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255963512|gb|EET95988.1| predicted protein [Enterococcus faecalis T1] gi|310631073|gb|EFQ14356.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315152233|gb|EFT96249.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315159811|gb|EFU03828.1| conserved hypothetical protein [Enterococcus faecalis TX0312] Length = 276 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLITE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|330981639|gb|EGH79742.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 206 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 81/205 (39%), Gaps = 38/205 (18%) Query: 75 SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALD 130 S+ +L TH HADH G+ LR G + P D D KH F F A + Sbjct: 22 SLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFE 81 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 R A G ++ + H + + G+ F AY TD Sbjct: 82 RR----------------------ALGALQVTALPLAHSK-PTFGYLFEGDGQRFAYLTD 118 Query: 187 VNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P ++ E LQ LD L++D + +H L+ +L+ IE + P A+LTH+ Sbjct: 119 TVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVG 178 Query: 242 VDLDYDMVLKS--TPSRVVPAFDGM 264 LD ++ S P VV D M Sbjct: 179 HTLDAWLMEHSGQLPGNVVVGRDEM 203 >gi|315167410|gb|EFU11427.1| conserved hypothetical protein [Enterococcus faecalis TX1341] Length = 276 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPRDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|289625741|ref|ZP_06458695.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649974|ref|ZP_06481317.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868136|gb|EGH02845.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 249 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/279 (26%), Positives = 107/279 (38%), Gaps = 51/279 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC N RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F A + R A G ++ + H + + G+ F Sbjct: 114 ILDFSQPFAAFETR----------------------ALGALQVTALPLTHSK-PTFGYMF 150 Query: 179 GN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 AY TD P + E LQ L+ LI+D + +H L+ +L+ I+ Sbjct: 151 EGDGRRFAYLTDTVGLPDATCEFLQRQPLEVLILDCSMPPQPQPPRNHNDLTLALQTIDQ 210 Query: 230 INPKNAILTHMHVDLD-YDMVL-KSTPSRVVPAFDGMQF 266 + P A+LTH+ LD + M L P V+ DGM Sbjct: 211 LRPGKAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|315647117|ref|ZP_07900230.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315277319|gb|EFU40648.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 244 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 48/267 (17%) Query: 21 ITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-IDAV 79 + G WGA KN T L R +++ V++D G ++ E L +DAV Sbjct: 5 VIGYWGA---YPAKNEATSGYLL------RHADSAVLLDCGSGVLSRLQNEINLEQLDAV 55 Query: 80 LYTHPHADHIHGIDGLRGYFL------KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 TH HADH + L L K+ RP+DVY + + L + Sbjct: 56 FITHTHADHFADVYALEFSALVLTQLGKRTRPLDVYIYGENLASL------------NFA 103 Query: 134 YPPIVNPIVIE---NNDVPICMKSAGGVIEAIPI--LQQHGRISSLGFRFGNVAYCTDVN 188 YP V+ IE +V M S + +P ++ R + G+ YC+ Sbjct: 104 YPDYVHVHPIEPARTVNVGELMFSFSETVHEVPCCAIKATTREGANLIYSGDTGYCSSF- 162 Query: 189 AFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHM-HVD 243 +E +N D L+++ ++ G+ H + E+ + L N ILTH H Sbjct: 163 ------IEFAENADLLVLECSLYDVQKGVLDGHLTAGEAGEIARLANAGYLILTHFPHYG 216 Query: 244 LDYDMVLKSTPSRVVP---AFDGMQFS 267 + +++ + P A+ G+++S Sbjct: 217 DQRQLAMEAARNYSGPIELAYSGLKWS 243 >gi|71652712|ref|XP_815007.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70880029|gb|EAN93156.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 345 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 16/117 (13%) Query: 9 ILGCGASLGVPRITGDWGAC----------DPTNPKNRRTRSSLKIS-RVSERGSNTTVI 57 I+G G+S P ++ GA DP + KN R S I R S V+ Sbjct: 12 IVGSGSSTATPMLSCITGASPCSTCTEALKDPQHSKNHRLNVSFLIQLRHPADYSLHNVL 71 Query: 58 VDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +D G F ++ V + AVL TH HAD I GID LR F + P+DVYA Sbjct: 72 IDCGKTFRESAMKVFPAVGVSDLSAVLLTHDHADAIFGIDELR-EFNRPDIPLDVYA 127 >gi|126667722|ref|ZP_01738690.1| carbon-phosphorus lyase complex accessory protein [Marinobacter sp. ELB17] gi|126627825|gb|EAZ98454.1| carbon-phosphorus lyase complex accessory protein [Marinobacter sp. ELB17] Length = 254 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 40/269 (14%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GA+ GVP AC + K + S + E G+ +++D G + Sbjct: 4 TFLGTGAAGGVPLYGCCCAAC--SVAKTNAALAREPCSALIESGT-IRILIDGG----LM 56 Query: 68 VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 L ++ +DA++ TH H DH+ G+ LR + P+ + PD LF Sbjct: 57 DLHKRFAPGDLDAIVLTHFHPDHVQGLFHLR-WGKGPSIPVFIPPDPDGCADLFR----- 110 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-----N 180 +P +++ N G ++ P+ H + + G+ F Sbjct: 111 -------------HPGILDFNPQKAFSAFEIGGLKVTPVPLLHSK-PTFGYVFEVTGGPT 156 Query: 181 VAYCTDVNAFPAESLEKLQNL--DFLIIDAL--KNGLHSSHFSLSESLKKIELINPKNAI 236 AY TD P ++ LQ + D L ID +G H + +L I+ ++P A Sbjct: 157 FAYLTDTRGLPDDTQHFLQTIKPDGLAIDCTFPPSGQPKGHNDWTLALDCIQAVDPARAW 216 Query: 237 LTHMHVDLD--YDMVLKSTPSRVVPAFDG 263 L H+ +LD + P+R+ A DG Sbjct: 217 LIHISHELDNWRQSTNPALPNRISVARDG 245 >gi|294507228|ref|YP_003571286.1| metallo-beta-lactamase superfamily, [Salinibacter ruber M8] gi|294343556|emb|CBH24334.1| metallo-beta-lactamase superfamily, putative [Salinibacter ruber M8] Length = 281 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 41/246 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--M 66 +LG GA+L P RT + L +S + T++VD G D + Sbjct: 33 LLGTGAALSDPH----------------RTTTMLAVS--DDASPANTLVVDCGGDVLQRL 74 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYA---APDCMKHLFES 121 Q + +D ++ TH H DH G + + + RPI V A + L+++ Sbjct: 75 QACGRSIDEVDGLIVTHAHMDHASGFPLFMEKIWLDGRDRPIPVCGIEPAQAQAQRLWDA 134 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D PPI V + P+ ++ V A P+ HG +++G RF Sbjct: 135 FAPVHEGWD--GIPPIDWRTVPHEHGAPVWTQAPWAVTAA-PV--DHGDTANVGLRFEHA 189 Query: 179 ---GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 G +AY D P S+ L Q D L+ +A NG+ H + + + + Sbjct: 190 DGDGVLAYSCDTA--PTSSVVDLAQGADVLVHEA--NGVGDGHSTAAGAAEVAAEAEVDR 245 Query: 235 AILTHM 240 +L H+ Sbjct: 246 LLLVHL 251 >gi|257419538|ref|ZP_05596532.1| predicted protein [Enterococcus faecalis T11] gi|257161366|gb|EEU91326.1| predicted protein [Enterococcus faecalis T11] Length = 276 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRFHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHILLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|262274182|ref|ZP_06051994.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Grimontia hollisae CIP 101886] gi|262221992|gb|EEY73305.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Grimontia hollisae CIP 101886] Length = 211 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 40/203 (19%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY------AAPDCMKHLFESFRYCFKALDD 131 L TH H DH+ G+ LR PI V+ D +KH C + L + Sbjct: 33 GFLLTHFHVDHVQGLFHLR---WGNPSPIPVWCPDDELGCADLLKH-----PGCLQFLPE 84 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--RFG--NVAYCTDV 187 + +VN + P+ +H R ++G+ +G ++AY TD Sbjct: 85 MNHGDVVNI----------------NGLRVTPLQLKHSR-PTVGYLLEYGQKSIAYLTDT 127 Query: 188 NAFPAESLEKLQN---LDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILTHMHV 242 PA++ + L + LD LI+D H S+H ++ + + E + PK I+TH+ Sbjct: 128 YGLPAQTCDFLASQPQLDALIMDCSFPPDHEGSNHGNIESAYQIYENLQPKALIITHIGH 187 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQ 265 +LD ++ + + V+ +DGM+ Sbjct: 188 ELDCWLMENNVQTGVLAGYDGMK 210 >gi|288870412|ref|ZP_06113991.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288867296|gb|EFC99594.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 282 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 13/91 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG A+ G P + AC KN RTRS + + TV++D PD Y+ Sbjct: 12 LGTAAAEGWPAVFCTCEACKRARKLGGKNIRTRSQAVV--------DNTVLIDLPPDTYL 63 Query: 67 QVLRE--QVLSIDAVLYTHPHADHIHGIDGL 95 VLRE ++ +I++VL TH H DH + ++ L Sbjct: 64 HVLREGMEIDTIESVLITHSHQDHFYPMELL 94 >gi|83814725|ref|YP_445347.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] gi|83756119|gb|ABC44232.1| metallo-beta-lactamase superfamily, putative [Salinibacter ruber DSM 13855] Length = 266 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 41/246 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--M 66 +LG GA+L P RT + L +S + T++VD G D + Sbjct: 18 LLGTGAALSDPH----------------RTTTMLAVS--DDASPANTLVVDCGGDVLQRL 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYA---APDCMKHLFES 121 Q + +D ++ TH H DH G + + + RPI V A + L+++ Sbjct: 60 QACGRSIDEVDGLIVTHAHMDHASGFPLFMEKIWLDGRDRPIPVCGIEPARAQAQRLWDA 119 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D PPI V + P+ ++ V A P+ HG +++G RF Sbjct: 120 FAPVHEGWD--GIPPIDWRTVPHEHGAPVWTQAPWAVTAA-PV--DHGDTANVGLRFEHA 174 Query: 179 ---GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 G +AY D P S+ L Q D L+ +A NG+ H + + + + Sbjct: 175 GGDGVLAYSCDTA--PTSSVVDLAQGADVLVHEA--NGVGDGHSTAAGAAEVAAEAGVDR 230 Query: 235 AILTHM 240 +L H+ Sbjct: 231 LLLVHL 236 >gi|257090129|ref|ZP_05584490.1| predicted protein [Enterococcus faecalis CH188] gi|312903567|ref|ZP_07762747.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|256998941|gb|EEU85461.1| predicted protein [Enterococcus faecalis CH188] gi|310633443|gb|EFQ16726.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|315162881|gb|EFU06898.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315577879|gb|EFU90070.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 276 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 68/286 (23%), Positives = 109/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R I+ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLQYQIIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|261819912|ref|YP_003258018.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium wasabiae WPP163] gi|261603925|gb|ACX86411.1| phosphonate metabolism protein PhnP [Pectobacterium wasabiae WPP163] Length = 257 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 42/275 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-PDFY 65 F LG G + VP + C ++ R + + ++ ++ +++D G P+ Sbjct: 10 FHFLGTGGAQQVPVFGCECEICQQAQRDEKKRRRACCAAITTK---DSVILIDAGLPELS 66 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +L S +L TH H DH+ G+ LR GY PI V+ PD + Sbjct: 67 PYLLP---YSRRHILLTHYHMDHVQGLFPLRWGY----GDPIPVFGPPDDV--------- 110 Query: 125 CFKALDDR-TYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFGN-- 180 DD +P I++ + +P G+ I +P++ H +++ G+ Sbjct: 111 ---GCDDLFKHPGILH---FQKPLMPFQPLELDGIRITPVPLI--HSKLT-YGYLIQTPT 161 Query: 181 --VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P E+ + L +LD+ ++D + +H ++ +L+ +NPK Sbjct: 162 HTLAYLTDTIGLPPETAQFLSAHSLDYAVVDCSHPPQTTPPRNHNDVTRTLEIFTQLNPK 221 Query: 234 NAILTHMHVDLDYDMVLKS-TPSRVVPAFDGMQFS 267 LTH+ +LD + ++ P V A+DG + Sbjct: 222 QLYLTHIGHELDRWLQTQTLLPEHVHAAYDGAELG 256 >gi|209518588|ref|ZP_03267407.1| phosphonate metabolism protein PhnP [Burkholderia sp. H160] gi|209500952|gb|EEA00989.1| phosphonate metabolism protein PhnP [Burkholderia sp. H160] Length = 268 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 110/280 (39%), Gaps = 49/280 (17%) Query: 8 TILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG GA+ GVP D AC P R S I + R V++D G Sbjct: 5 TFLGTGAAGGVPLYGCDCPACTRARAVPACVRRPCSALIETDTTR-----VLLDAG---- 55 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + L E+ S+DA++ TH H DH+ G+ LR +PI +A PD + +R Sbjct: 56 LVDLSERFPAGSLDAIVLTHFHPDHVQGLFHLR---WGVGKPIPTWAPPDS-NGCADLYR 111 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGV-IEAIPILQQHGRISSL-----GF 176 NP ++ N+ GG+ A+P++ G Sbjct: 112 ---------------NPGLLAFNHAEKFGTFDVGGLRFTALPLIHSKPTFGYAIEGPDGE 156 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLD--FLIIDAL--KNGLHSSHFSLSESLKKIELINP 232 RF AY TD P +L+ LQ L +D ++H + +E + P Sbjct: 157 RF---AYLTDTIGLPPSTLDWLQRWGPFSLALDCSFPPRAQPANHNDWDTACALVEQMRP 213 Query: 233 KNAILTHMHVDLDYDMVLKST---PSRVVPAFDGMQFSSP 269 + LTH+ LD ++ +S P V+ A DGM P Sbjct: 214 ERTWLTHVSHGLDTWLLEQSESAMPEGVLIAHDGMAHMLP 253 >gi|257386799|ref|YP_003176572.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257169106|gb|ACV46865.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 278 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 33/207 (15%) Query: 24 DWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYT 82 D C+ + RTR S+ + RV+ ++++D PDF Q LRE V DA + T Sbjct: 20 DCATCERARDRGVERTRFSVHVERVN----GDSLLIDFSPDFRQQFLRESVPLPDAAVVT 75 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H H DH+ G+ + Y L P VYAA + S + DR + ++ I Sbjct: 76 HVHFDHLDGLGNV--YRLVDSLP--VYAADETDPQTGTS---VVGTIRDRYH--YLDRIS 126 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------------GNVAYCTDVNAF 190 + ++AG + +P++ H + S G R G+ +Y D NA Sbjct: 127 VRGRTPFQRFEAAGFEVTLVPVV--HPPLVSYGLRVDDPDSGASLAISGDTSYAIDENA- 183 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSSH 217 E L+ D +++ + + SH Sbjct: 184 ----REVLRGADLALVEGIVHADLCSH 206 >gi|218187252|gb|EEC69679.1| hypothetical protein OsI_39117 [Oryza sativa Indica Group] Length = 334 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 75/234 (32%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHAD 87 NP N R +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD Sbjct: 71 NP-NYRCNTSLLIDYCQDENAHKYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHAD 129 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 + G+D +R + +SF ND Sbjct: 130 AVLGLDDVR---------------------IVQSFS--------------------PTND 148 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 IE PI + S+ +F Y E + ++ LD+ +I+ Sbjct: 149 -----------IEPTPIYLSQFAMDSIAQKF---PYLVRKKLKEGEEVRRVAQLDWRVIE 194 Query: 208 A---------------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 + L G H+ H ++L ++ I PK A+L M ++D+ Sbjct: 195 SDLQIPFVTSGLEFVPLPTGSHNVHLCWDQTLDAVKRICPKRALLIGMTDEMDH 248 >gi|312137056|ref|YP_004004393.1| beta-lactamase superfamily hydrolase [Methanothermus fervidus DSM 2088] gi|311224775|gb|ADP77631.1| beta-lactamase superfamily hydrolase [Methanothermus fervidus DSM 2088] Length = 261 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 28/225 (12%) Query: 58 VDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYAAPDC 114 +D GP +++ + + +++D VL +H H DH ++ + K R Sbjct: 30 IDPGPGAFIRTYQFGLNPINLDVVLVSHAHTDHYSDVEVMIEAMTKGMTRRRGTIVGSRS 89 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + F C + + + +V+E D K I+A P QHG + + Sbjct: 90 VIEGYNDFGPCIS----KYHLTKSDVVVMEPGD---TTKIGNVKIKATP--TQHGDPTGI 140 Query: 175 GFRFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDALK-NGLHSSHFSLSESLKKI- 227 GF+F ++Y +D F E L K + D LI + ++ NG ++ LKK+ Sbjct: 141 GFQFKTKDIVISYTSDTAYF--EDLGKYHKGADILIANVIRPNGERIRGHMCTDDLKKLL 198 Query: 228 ELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQ 265 ++ PK I+TH + + + + K T RV+PA DGM+ Sbjct: 199 NIVRPKLTIMTHFGMKMINNNPAKEARDLCKETSLRVIPASDGMK 243 >gi|322815523|gb|EFZ24165.1| hypothetical protein TCSYLVIO_9710 [Trypanosoma cruzi] Length = 345 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 16/117 (13%) Query: 9 ILGCGASLGVPRITGDWGAC----------DPTNPKNRRTRSSLKIS-RVSERGSNTTVI 57 I+G G+S P ++ GA DP + KN R S I R S V+ Sbjct: 12 IVGSGSSAATPMLSCINGASPCSTCTEALKDPQHSKNHRLNVSFLIQLRHPADYSLHNVL 71 Query: 58 VDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +D G F ++ V + AVL TH HAD I GID LR F + P+DVYA Sbjct: 72 IDCGKTFRESAMKVFPAVGVSDLSAVLLTHDHADAIFGIDELR-EFNRPDIPLDVYA 127 >gi|256762797|ref|ZP_05503377.1| predicted protein [Enterococcus faecalis T3] gi|256684048|gb|EEU23743.1| predicted protein [Enterococcus faecalis T3] gi|315173529|gb|EFU17546.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 276 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D ++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|229545575|ref|ZP_04434300.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255975608|ref|ZP_05426194.1| predicted protein [Enterococcus faecalis T2] gi|256619305|ref|ZP_05476151.1| predicted protein [Enterococcus faecalis ATCC 4200] gi|256853365|ref|ZP_05558735.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256964882|ref|ZP_05569053.1| predicted protein [Enterococcus faecalis HIP11704] gi|307272973|ref|ZP_07554220.1| hypothetical protein HMPREF9514_01739 [Enterococcus faecalis TX0855] gi|307275725|ref|ZP_07556865.1| hypothetical protein HMPREF9521_01354 [Enterococcus faecalis TX2134] gi|307277819|ref|ZP_07558903.1| hypothetical protein HMPREF9515_00153 [Enterococcus faecalis TX0860] gi|307291746|ref|ZP_07571618.1| hypothetical protein HMPREF9509_02045 [Enterococcus faecalis TX0411] gi|229309315|gb|EEN75302.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255968480|gb|EET99102.1| predicted protein [Enterococcus faecalis T2] gi|256598832|gb|EEU18008.1| predicted protein [Enterococcus faecalis ATCC 4200] gi|256711824|gb|EEU26862.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256955378|gb|EEU72010.1| predicted protein [Enterococcus faecalis HIP11704] gi|306497198|gb|EFM66743.1| hypothetical protein HMPREF9509_02045 [Enterococcus faecalis TX0411] gi|306505216|gb|EFM74402.1| hypothetical protein HMPREF9515_00153 [Enterococcus faecalis TX0860] gi|306507601|gb|EFM76731.1| hypothetical protein HMPREF9521_01354 [Enterococcus faecalis TX2134] gi|306510587|gb|EFM79610.1| hypothetical protein HMPREF9514_01739 [Enterococcus faecalis TX0855] gi|315029453|gb|EFT41385.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315032061|gb|EFT43993.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315144911|gb|EFT88927.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 276 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLQYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|50119449|ref|YP_048616.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium atrosepticum SCRI1043] gi|49609975|emb|CAG73413.1| putative phosphonate metabolism protein [Pectobacterium atrosepticum SCRI1043] Length = 261 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 46/274 (16%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-PDFY 65 F LG G + VP + C +N R + ++ + + +++D G P+ Sbjct: 14 FHFLGTGGAQQVPAFGCECEVCQQAQ-RNESKRRRACCAAITTK--DRIILIDAGLPELS 70 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +L I L TH H DH+ G+ LR GY PI V+ PD Sbjct: 71 PYLLPYPQRHI---LLTHYHMDHVQGLFPLRWGY----GEPIPVFGPPD----------- 112 Query: 125 CFKALDDR-TYPPIVN---PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 DD +P I++ P++ + G I +P++ H +++ G+ Sbjct: 113 -EAGCDDLFKHPGILHFQKPLMAFQP-----FELDGIRITPVPLI--HSKLT-YGYLIQT 163 Query: 181 ----VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 +AY TD P E+ + L LD+ I+D + L +H ++ +L+ +N Sbjct: 164 PTHTLAYLTDTIGLPPETTQFLASHTLDYAIVDCSHPPQTMLPRNHNDITRALEIFTQLN 223 Query: 232 PKNAILTHMHVDLDYDMVLKS-TPSRVVPAFDGM 264 PK LTH+ +LD + ++ P V A+DG+ Sbjct: 224 PKQLYLTHISHELDRWLQTQTLLPENVHAAYDGL 257 >gi|84489385|ref|YP_447617.1| metal-dependent hydrolase [Methanosphaera stadtmanae DSM 3091] gi|84372704|gb|ABC56974.1| predicted metal-dependent hydrolase [Methanosphaera stadtmanae DSM 3091] Length = 259 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%) Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS--SH 217 I +HG + +GF N+ Y +D FP E E+ ++ D LI + +K G H Sbjct: 137 IHTKHGDPTCVGFNINYKGFNINYTSDTEYFP-ELAEEHKDADVLIGNVIKEGERKIKGH 195 Query: 218 FSLSESLKKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFS 267 + + IE + PK AI+TH+ V+L + + K T R + A DG+ + Sbjct: 196 LRTRDFKQLIEEVQPKIAIMTHLRVNLIMNNPFQNTRTITKETGVRTIAATDGLTMN 252 >gi|221061781|ref|XP_002262460.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] gi|193811610|emb|CAQ42338.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] Length = 467 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 29/158 (18%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPH 85 + KN+R S+ + + +++ V++D G F +LR + + +D+VL +H H Sbjct: 97 DSKNKRNNISVLV-----KSNDSYVLIDVGKTFRDSLLRNKDKINFYEIKLDSVLISHSH 151 Query: 86 ADHIHGIDGLR------------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 D ++GID LR Y+ K PID+Y + L + Y K + Sbjct: 152 TDALNGIDDLRDLQEYNKITIGDSYYYTPKNPIDIYLNSVSYERLRNGYEYLVKKRKENI 211 Query: 134 YPPIV---NPIVIEN---NDVPICMKSAGGVIEAIPIL 165 + + N +VI++ N + + K+A + + ++ Sbjct: 212 FSSKIAALNLLVIKDEKYNKLILEEKTANQIKDGTAVM 249 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 10/96 (10%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFP---AESLEKLQNLDFLIIDALK- 210 I IP QHGR +G+ G+ + Y +D + P E ++K+ + + LIIDAL Sbjct: 342 IRFIPF--QHGRNYVCVGYIIGDNEKLVYISDCSYIPPSLLEYIKKIGSTEVLIIDALYY 399 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H SHFSL ES+K LI PK M D+++ Sbjct: 400 KAKHYSHFSLHESIKIALLIKPKKVYFIGMSCDIEH 435 >gi|119947280|ref|YP_944960.1| carbon-phosphorus lyase complex accessory protein [Psychromonas ingrahamii 37] gi|119865884|gb|ABM05361.1| beta-lactamase domain protein [Psychromonas ingrahamii 37] Length = 255 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 35/251 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG G+ G P + C+ NP RR + + + G+ +++D G + Sbjct: 3 FTFLGTGSVKGAPVYGCECIVCNRALANPDLRRNPACGFLEIAGQLGT-VRLLIDAG--Y 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + R S+DAVL TH H DH+ G+ +R + + + P+ +PD K + F+Y Sbjct: 60 HHLAERFPPGSLDAVLLTHFHMDHVQGLFPIR-WGVGETIPV---FSPDDPKGCDDLFKY 115 Query: 125 -CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSL-GFRFG 179 +T P E D+ +I IP++ G + L G RF Sbjct: 116 PGIFDFSQKTRP----FQTFEFKDL---------LITPIPLVHSKLTMGYVIELNGKRF- 161 Query: 180 NVAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSS---HFSLSESLKKIELINPKN 234 AY D + + L Q +D +I+D + L ++ H L+ +L+ + PK Sbjct: 162 --AYLCDSGLLRRDVKQYLIDQPIDLMILDCEQPPLETAPRNHNDLTRALEIFAEVQPKK 219 Query: 235 AILTHMHVDLD 245 +LTH+ +LD Sbjct: 220 LVLTHISHNLD 230 >gi|257416332|ref|ZP_05593326.1| predicted protein [Enterococcus faecalis AR01/DG] gi|257158160|gb|EEU88120.1| predicted protein [Enterococcus faecalis ARO1/DG] Length = 276 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F ++ E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSDMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|253686889|ref|YP_003016079.1| phosphonate metabolism protein PhnP [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753467|gb|ACT11543.1| phosphonate metabolism protein PhnP [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 265 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 109/268 (40%), Gaps = 38/268 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-PDFY 65 F LG G++ VP + C R+ R + + ++ + +++D G P+ Sbjct: 14 FHFLGTGSAQQVPAFGCECEVCQQAQQDERKRRRACCAAITTQ---DRVILIDAGLPELA 70 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +L S +L TH H DH+ G+ LR GY PI V+ PD Sbjct: 71 PYLLP---YSRRHILLTHYHMDHVQGLFPLRWGY----GDPIPVFGPPD-----DAGCDD 118 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 FK + P + P D G I +P++ H +++ G+ Sbjct: 119 LFKHPGILHFQPPLTPFQSFELD--------GISITPVPLI--HSKLT-YGYLIQTPTHT 167 Query: 181 VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 +AY TD P E+ + L LD+ ++D + +H + +L+ +NPK Sbjct: 168 LAYLTDTIGLPPETAQFLSAHTLDYAVVDCSHPPQTTPPRNHNDVPRALEIFTQLNPKQL 227 Query: 236 ILTHMHVDLDYDMVLKS-TPSRVVPAFD 262 LTH+ +LD + ++ P V A+D Sbjct: 228 YLTHIGHELDRWLQTQTLLPENVQAAYD 255 >gi|270265083|ref|ZP_06193346.1| carbon-phosphorus lyase complex accessory protein [Serratia odorifera 4Rx13] gi|270041017|gb|EFA14118.1| carbon-phosphorus lyase complex accessory protein [Serratia odorifera 4Rx13] Length = 260 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 101/274 (36%), Gaps = 45/274 (16%) Query: 6 HFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG-P 62 T LG G + +P D C P RR S + E T ++D G P Sbjct: 2 QLTFLGTGGAQQIPVFGCDCLVCQRARREPAFRRRPCSAMLKFQGE-----TTLLDAGLP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 R I L TH H DH+ G+ LR G F+ P D D KH Sbjct: 57 SLER---RFSAGEIQRFLLTHYHMDHVQGLFPLRWGCGNFIPVYGPADEQGCDDLFKH-- 111 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 P I + + P GG + P+ QH + +LG+ Sbjct: 112 ---------------PGI---LAFQPPLTPFERVELGG-LHITPLPLQHSK-PTLGYLVQ 151 Query: 180 ----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 +AY TD P ++ L+N LD L++D + +H L+ + + + + Sbjct: 152 AEGYALAYLTDTVGLPPDTEAFLRNITLDLLVLDCSLPPQPQAPRNHNDLTRAQETQQRL 211 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 P +LTH+ LD ++ P + AFD + Sbjct: 212 QPGRTLLTHISHHLDLWLMDNELPPGMELAFDNL 245 >gi|330951964|gb|EGH52224.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae Cit 7] Length = 192 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 36/184 (19%) Query: 75 SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALD 130 S+ +L TH HADH G+ LR G + P D D KH F F A + Sbjct: 9 SLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFE 68 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 R A G ++ + H + + G+ F AY TD Sbjct: 69 RR----------------------ALGALQVTALPLAHSK-PTFGYLFEGDGQRFAYLTD 105 Query: 187 VNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P ++ E LQ LD L++D + +H L+ +L+ IE + P A+LTH+ Sbjct: 106 TVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIECLRPGRAVLTHVG 165 Query: 242 VDLD 245 LD Sbjct: 166 HTLD 169 >gi|154502705|ref|ZP_02039765.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] gi|153796588|gb|EDN79008.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] Length = 265 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT +++DTG D ++ L + +D +L TH H+DHI G+ G F +K I Sbjct: 21 NTHLLIDTGISKKRIDAGLKELEIKGEELDGILITHEHSDHIQGL----GVF-SRKYEIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA P + + R A+ + Y I ++D + G I P Sbjct: 76 IYATPGTIAGIQAYSR--LGAMPEGLYHVI-------HSDESFML----GDIRVNPFAIS 122 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R +VA TD+ + A ++ LQNLD ++++A Sbjct: 123 HDANEPTGYRLECRDKSVAVATDLGIYDAYTVSHLQNLDAVLLEA 167 >gi|251778134|ref|ZP_04821054.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082449|gb|EES48339.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 351 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 23/191 (12%) Query: 56 VIVDTG--PDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 V++D G + + L+ Q +S +D V+ THPH DHI G+ + F + + AP Sbjct: 69 VLIDAGCNDNKALNYLKSQGISKLDCVIATHPHEDHIGGMTSVINNF-----EVGEFYAP 123 Query: 113 DCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + H +F KAL + T + + + I N + ++ I Q Sbjct: 124 K-VTHTTRTFENMIKALQSKGLKITTKNVGDALTIGNATMQFLAPNS-------SIYQDL 175 Query: 169 GRIS-SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKI 227 S + ++GN +Y +A E L + D LK G H SH S S++ + Sbjct: 176 NNYSIVIRLKYGNTSYLFTGDAESLSEGEILAKQLDISADVLKLGHHGSHSSTSQAF--L 233 Query: 228 ELINPKNAILT 238 + +NP+ AI++ Sbjct: 234 DKVNPQYAIVS 244 >gi|157368759|ref|YP_001476748.1| carbon-phosphorus lyase complex accessory protein [Serratia proteamaculans 568] gi|157320523|gb|ABV39620.1| beta-lactamase domain protein [Serratia proteamaculans 568] Length = 260 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 101/274 (36%), Gaps = 45/274 (16%) Query: 6 HFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG-P 62 T LG G + +P D C P RR S + E T ++D G P Sbjct: 2 QLTFLGTGGAQQIPVFGCDCLVCHRARREPAFRRRACSAMLKFQGE-----TTLLDAGLP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 R I L TH H DH+ G+ LR G F+ P D D KH Sbjct: 57 SLER---RFSAGEIQRFLLTHYHMDHVQGLFPLRWGCGNFIPVYGPADEQGCDDLFKH-- 111 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 P I + + P GG + P+ QH ++ +LG+ Sbjct: 112 ---------------PGI---LAFQPPFTPFETVELGG-LHITPLPLQHSKL-TLGYLIQ 151 Query: 179 ---GNVAYCTDVNAFP--AESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 ++AY TD P E+ + LD +++D + +H L+ + + + + Sbjct: 152 AAGKSLAYLTDTVGLPPDTEAFLRAVTLDLMVLDCSLPPQPQAPRNHNDLTRARETQQRL 211 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 P +LTH+ LD ++ P + AFD + Sbjct: 212 QPGRTLLTHISHHLDLWLMDNELPPGLELAFDNL 245 >gi|323488957|ref|ZP_08094194.1| ribonuclease Z [Planococcus donghaensis MPA1U2] gi|323397349|gb|EGA90158.1| ribonuclease Z [Planococcus donghaensis MPA1U2] Length = 314 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P +R S+L + + ERG T + D G Q+LR V I+ + TH H DHI Sbjct: 13 PSKQRNTSALVLKLLEERG--TVWLFDCGEATQHQILRTTVKPRKIEKIFITHMHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYA 110 G+ GL G F + P+++Y Sbjct: 71 GLPGLLGSRSFQAGEEPLEIYG 92 >gi|160903332|ref|YP_001568913.1| beta-lactamase domain-containing protein [Petrotoga mobilis SJ95] gi|160360976|gb|ABX32590.1| beta-lactamase domain protein [Petrotoga mobilis SJ95] Length = 451 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 29/204 (14%) Query: 52 SNTTVIVDTGPDFY----MQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +N +++D G ++Y + L+ Q V I+ ++ THP ADHI G+D + LK Sbjct: 93 NNVDILIDGGNNWYGDDVVTYLKSQDVDDIEYLIATHPDADHIGGLDDV----LKAFEVE 148 Query: 107 DVYAAPDCMKHLFESFR-YCFKALDDRTY-------PPIVNPIVIENNDVPICMKSAGGV 158 +VY APD + H +++ + + ++ TY ++NP + I S V Sbjct: 149 NVY-APD-VSHTTKTYNDFVLEVRNEGTYIKTAKAGITLINPALA----AVIGCPSFSNV 202 Query: 159 IEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 P+ ++S + FGN +Y +A + + N FL D LK G H Sbjct: 203 YFVGPVKNYGTDLNSWSAVMKLDFGNSSYLFTGDADRISEKDMIDNSMFLKADVLKVGHH 262 Query: 215 SSHFSLSESLKKIELINPKNAILT 238 S S S+ K +NPK A+++ Sbjct: 263 GSDSSTSQEFLK--EVNPKYAVIS 284 >gi|315169490|gb|EFU13507.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 276 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D ++L +H H+DH +G D + GY L + VY + Sbjct: 58 HLLQYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMGALSQKHEIITSYDGLE 273 >gi|315149772|gb|EFT93788.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 276 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 66/286 (23%), Positives = 109/286 (38%), Gaps = 48/286 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRR---TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ +P I + C K R T++ L I V +++D D Y+ Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDV--------LLIDFPGDSYL 57 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +L+ + D++L +H H+DH +G D + GY L + VY Sbjct: 58 HLLQYDLCFAEFDSLLISHWHSDHFYGEDLAYRMSGYALDVPNRLTVYGNEAVKTFYQRV 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + + R + ++ P C A I +P QHG S F F Sbjct: 118 FDLEGRQDNTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVID 167 Query: 179 -GNVAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIEL 229 G A+ + D F +E E L+ L+ + N +SH + E+LK I Sbjct: 168 DGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAE 227 Query: 230 INPK-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + + I H L Y +M S ++ ++DG++ Sbjct: 228 LKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|89092643|ref|ZP_01165596.1| cAMP phosphodiesterase class-II [Oceanospirillum sp. MED92] gi|89083155|gb|EAR62374.1| cAMP phosphodiesterase class-II [Oceanospirillum sp. MED92] Length = 230 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAA 111 + +++VD G + + EQ+L+I V+ TH H DHI G+ + Q K PI++YA Sbjct: 2 DDSLLVDAGTGIELLNM-EQMLAIRDVVITHAHIDHIIGLPLMLATIYDQHKEPINLYAL 60 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIV-IENNDVPICMKSAGGVIEAIP 163 P+ ++ L E + + D T P PI+ + +V ++ G IEA+P Sbjct: 61 PEVIEAL-EQHIFNWTIWPDYTCLPEERPIISLHKINVGDTLELQGKKIEALP 112 >gi|18978300|ref|NP_579657.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] gi|18894124|gb|AAL82052.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] Length = 258 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 33/256 (12%) Query: 8 TILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG G+ G P+ + C NP RRTR SL I E G ++VD PD + Sbjct: 4 VILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYI----EEGK---ILVDPSPDLH 56 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFES-- 121 + R ++ V TH H DHI G+ L+ Y + + + A + + F S Sbjct: 57 YHLERLN-KKVENVFITHAHFDHIFGVPDLQVYKKLIISSNTLGIKVAKELSRLAFGSEV 115 Query: 122 ---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + ++ L N VI + V ++ AGG + I G R Sbjct: 116 PSGYEWRYEELQFWNEYSFDNFRVI-HFPVIHSLEIAGGYLFEIK-----------GRRI 163 Query: 179 GNVAYCTDVNAFPAESLEK-LQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAI 236 G V T E ++K L+ +D LI++ K + H +S+S++ +++ + Sbjct: 164 G-VTGDTGPEILKDEKVKKLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGASYTV 222 Query: 237 LTHM-HVDLDYDMVLK 251 H+ H + ++++ K Sbjct: 223 FAHISHTNYSHEVLEK 238 >gi|281356144|ref|ZP_06242637.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281317513|gb|EFB01534.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 278 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 61/284 (21%), Positives = 112/284 (39%), Gaps = 40/284 (14%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG A+ G+P + W C+ ++ L+ S+T +VD GPD + Q Sbjct: 4 TFLGTAAAEGIPAL---WCECEVCRKAQQQRDRDLRRRCAYLIDSDT--LVDFGPDIFWQ 58 Query: 68 VLREQV--LSIDAVLYTHPHADHIHGIDGLRG---YFLKQKRPIDVYAAPDCMKHLFESF 122 + ID +++TH H+DH++GI+ + +F + I V+ +P + Sbjct: 59 CTEFNIDLTRIDRIVFTHAHSDHLNGIEFIWRRTPWFSTLRHRIKVFGSPAIFARMLSQI 118 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-----RISSLGFR 177 +D Y ++ ++I+ +V + G E + + H ++ +G Sbjct: 119 -----TMDSSIYQ--LSDLLIDPVEVRHGQTTDDGDFELLTLNADHAPGLEPQVHVIGRN 171 Query: 178 FGNVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKNGLHS-----------SHFSLSESL 224 D ES E L+ LD + ID GL + S + + L Sbjct: 172 GKRFFIANDTGFLREESWELLKGVKLDLVEIDC-TCGLRTPDCDRGHQGVNSVLAFRDRL 230 Query: 225 KKIELINPKNAI----LTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 ++ I P+ + +H L D+ P R+ A+DG+ Sbjct: 231 LELGCITPETPVYANHFSHNGGALHADLEAFFAPHRIRVAYDGL 274 >gi|188588842|ref|YP_001921523.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499123|gb|ACD52259.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 359 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 26/171 (15%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR--- 132 +D VL THPH DHI G+ + F I + AP + H +F KAL ++ Sbjct: 92 LDYVLATHPHEDHIGGMTSVINNF-----KIGEFYAPK-VTHTTRTFENMVKALQNKGLK 145 Query: 133 -TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP 191 T P I + + I N + ++ + + + L ++GN +Y V Sbjct: 146 LTAPTIGDTLTIGNATLQFLAPNS----TTYQDMNNYSIVCKL--KYGNTSY---VFMGD 196 Query: 192 AESLEK----LQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 AESL + + LD + D LK G H SH S S+ ++ +NP+ AI++ Sbjct: 197 AESLSEGEILAKQLD-ISADVLKLGHHGSHSSTSQVF--LDKVNPQYAIVS 244 >gi|184200957|ref|YP_001855164.1| putative ComEC/Rec2-related protein [Kocuria rhizophila DC2201] gi|183581187|dbj|BAG29658.1| putative ComEC/Rec2-related protein [Kocuria rhizophila DC2201] Length = 913 Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 3/48 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 G ++ V+VD GPD Q LR+ V +DAV+ TH HADH+ G++GL Sbjct: 650 GEHSAVLVDGGPDPRALTQCLRDADVTHLDAVIATHDHADHVAGLEGL 697 >gi|162146767|ref|YP_001601228.1| beta-lactamase-like protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785344|emb|CAP54891.1| Beta-lactamase-like protein [Gluconacetobacter diazotrophicus PAl 5] Length = 231 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 GS V+VD G D + L + L++DA+L TH H DH G D LR ++ Sbjct: 38 GSRHAVVVDPGGDVPRLLHELASRDLTVDAILLTHGHLDHAGGADALRAELSGRQGAAVP 97 Query: 109 YAAPDCMKHLF------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 PD ++ RY + + D T V+ V +N +P+ +S Sbjct: 98 VIGPDARDAFLLSDIAAQAARYGLEGMRDVT----VDRFVTDNEILPLLGRS 145 >gi|46446103|ref|YP_007468.1| hypothetical protein pc0469 [Candidatus Protochlamydia amoebophila UWE25] gi|46399744|emb|CAF23193.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 259 Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 31/166 (18%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S T V++D G + + + IDA+L TH H+DHI G+ L K I Sbjct: 23 SQTKVLIDAGISAKAIQNRLAEINVDISDIDAILITHEHSDHIQGLK-----VLAYKLGI 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V A + K + E+FR C K + E D IE P Sbjct: 78 PVLANHETAKGIVEAFRNCPK------FKIFSTGETFEFKD-----------IEVHPFTI 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 QH I + F + +CTD+ + KLQ D+L +++ Sbjct: 121 QHDTIDPVAFTIRLNDLKLGFCTDLGFATSLVQAKLQGCDYLYLES 166 >gi|157869425|ref|XP_001683264.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224148|emb|CAJ04530.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 426 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 16/106 (15%) Query: 7 FTILGCGASLGVPRI---TGDWGACD----PTNPKNRRTRSSLKISRVSERGSNTT---- 55 T +G G S VP I T D D P+ P NRR SL IS G + Sbjct: 9 LTFVGTGVSSAVPVIGHLTTDCACRDAIANPSGP-NRRNNVSLLISLPFAEGKSGVEWHH 67 Query: 56 VIVDTGPDF---YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 V++D G F YM+VL +V +DA+L TH HAD +H ++ L G Sbjct: 68 VLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCG 113 >gi|156095751|ref|XP_001613910.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802784|gb|EDL44183.1| hypothetical protein, conserved [Plasmodium vivax] Length = 470 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 23/115 (20%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPH 85 N KN+R + + + +++ V++D G F +LR + + +D+VL +H H Sbjct: 97 NSKNKRNNICVLV-----KSNDSYVLIDVGKTFRDSLLRNKDKINFYEIKLDSVLISHSH 151 Query: 86 ADHIHGIDGLR------------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 D ++GID LR Y+ K PID+Y + L + Y K Sbjct: 152 TDALNGIDDLRDLQEYNKITKGDSYYYTPKNPIDIYVNAVSYERLRNGYDYLVKK 206 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQNL---DFLIIDALK- 210 I IP QHGR +G+ G + Y +D + P LE ++ + + L+IDAL Sbjct: 345 IRFIPF--QHGRNYICVGYIIGENEKLVYISDCSYLPPNVLEYIKKVGPTEVLVIDALYY 402 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H SHFSL ES+K LI PK M D+++ Sbjct: 403 KAKHYSHFSLHESIKIALLIKPKKVYFIGMSCDIEH 438 >gi|90407278|ref|ZP_01215464.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] gi|90311561|gb|EAS39660.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] Length = 258 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I + + S ++VD G +++L +Q LS+DA+L TH H DHI GI L +F K+ Sbjct: 15 IWLIKDSQSQRCILVDPGDAQPVLEILEQQNLSVDAILVTHAHQDHIGGISELLAHFNKE 74 >gi|315303944|ref|ZP_07874400.1| ribonuclease Z [Listeria ivanovii FSL F6-596] gi|313627682|gb|EFR96359.1| ribonuclease Z [Listeria ivanovii FSL F6-596] Length = 306 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 6/120 (5%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G QVLR Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQVLRSQIKLSKLEFIFITHMHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F + +Y P +++ S R L + + P VI +++ Sbjct: 71 GLPGLLSSRSFQGGDSDLTIYGPPGVQEYIETSLRLSGTRLTYKIIFEEIEPGVIFEDEM 130 >gi|209543246|ref|YP_002275475.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530923|gb|ACI50860.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 226 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 GS V+VD G D + L + L++DA+L TH H DH G D LR ++ Sbjct: 33 GSRHAVVVDPGGDVPRLLHELASRDLTVDAILLTHGHLDHAGGADALRAELSGRQGAAVP 92 Query: 109 YAAPDCMKHLF------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 PD ++ RY + + D T V+ V +N +P+ +S Sbjct: 93 VIGPDARDAFLLSDIAAQAARYGLEGMRDVT----VDRFVTDNEILPLLGRS 140 >gi|90422274|ref|YP_530644.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90104288|gb|ABD86325.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 244 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 79/211 (37%), Gaps = 37/211 (17%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 G ++D G + R +L ID VL TH HADH G+ L F K+KRP+ Sbjct: 26 GEQVNFLIDCGASSLPALKRYGILRDDIDLVLITHFHADHFGGVPFLLLEAQFGKRKRPL 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-----------PICMKSA 155 + P L F+ ++ + IE N+ P+ + Sbjct: 86 VIAGPPGIELRLTRLMEAMFEHSSSTKQHFELSVVAIEPNETREFGAVKVSAFPVVHGDS 145 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------L 209 GG A I + GR +AY D + + + D LI +A + Sbjct: 146 GGPFHAYRI-EAEGR---------TLAYSGDTQ-WTETLVGAGHDADLLIAEAYTYDRPV 194 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 KN H SL + INP+ ILTHM Sbjct: 195 KN-----HLSLKTLETHLPEINPRRLILTHM 220 >gi|255638707|gb|ACU19658.1| unknown [Glycine max] Length = 232 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 34/208 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNP-------------KNRRTRSSLKISRVSER--GSNT 54 LG G S VP + DP P N R +SL I + G Sbjct: 20 LGSGCSSMVPNVMCLLQPSDPPCPVCVQSLSIPPERNPNYRCNTSLLIDYCGDANAGDRK 79 Query: 55 TVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPI 106 +++D G F VLR ++ +D+++ TH HAD + G+D +R P Sbjct: 80 YILIDVGKTFRETVLRWFVAHRIPRVDSIILTHEHADAVLGLDDVRAVQAFSPTNDIDPT 139 Query: 107 DVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + E F Y + + R I I+ ++ + P ++G Sbjct: 140 PIYLSQHSMDSIAEKFPYLVQKKRKEGAEIRRVAQIDWNIIADDCNKPFL--ASGLKFTP 197 Query: 162 IPILQQHGRISSLGFRFGN---VAYCTD 186 +P++ I LGF FG VAY +D Sbjct: 198 LPVMHGEDYI-CLGFLFGERNRVAYISD 224 >gi|146086722|ref|XP_001465625.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069724|emb|CAM68050.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 426 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 16/106 (15%) Query: 7 FTILGCGASLGVPRI---TGDWGACD----PTNPKNRRTRSSLKISRVSERGSNTT---- 55 T +G G S +P I T D D P+ P NRR SL IS G + Sbjct: 9 LTFVGTGVSSAIPVIGHLTTDCACRDAIANPSGP-NRRNNVSLLISLPFAEGESGVEWHH 67 Query: 56 VIVDTGPDF---YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 V++D G F YM+VL +V +DA+L TH HAD +H ++ L G Sbjct: 68 VLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCG 113 >gi|311281363|ref|YP_003943594.1| phosphonate metabolism protein PhnP [Enterobacter cloacae SCF1] gi|308750558|gb|ADO50310.1| phosphonate metabolism protein PhnP [Enterobacter cloacae SCF1] Length = 252 Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 43/271 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVDTG-PD 63 + G G + VP D AC RR RS + R R + ++D G PD Sbjct: 7 LTGTGGAQLVPVFGCDCAAC-------RRARSQAQFRRRPCSAEIRYNEAVTLLDAGLPD 59 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + R S L TH H DH+ G+ LR + + ++ I VY PD + + FR Sbjct: 60 L---MERWPAGSFQQFLLTHYHMDHVQGLFPLR-WGVGER--IAVYGPPD-EQGCDDLFR 112 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 + L D ++ V P V+ + G ++ P+ H ++ + G+ Sbjct: 113 H--PGLLDFSH--TVEPFVV--------FELQG--LQVTPLPLNHSKL-TFGYLLESAHS 157 Query: 180 NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKN 234 VA+ +D P ++L+ L N +IID + +H L+ + E I Sbjct: 158 RVAWLSDTAGLPDKTLKFLLNNHPQAIIIDCSHPPRAETPKNHCDLNTVIAINETIRSPR 217 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 ILTH+ D M+ P +DGM+ Sbjct: 218 VILTHISHQFDVWMMDNPLPPGFEAGYDGME 248 >gi|292656038|ref|YP_003535935.1| ATP-binding protein [Haloferax volcanii DS2] gi|291372840|gb|ADE05067.1| ATP-binding protein [Haloferax volcanii DS2] Length = 274 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 33/155 (21%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG---- 91 RTR S+ + +ER + +++VD PDF Q L + V D L TH H DH+ G Sbjct: 33 ERTRFSVHVQ--NER-TGESLLVDFSPDFRHQFLTQDVPLPDEALVTHIHFDHLDGLGNV 89 Query: 92 ---IDGLRGYFLKQKRPIDVYAAPDCMKHL--------------FESFRYCFKALDDRTY 134 +D L + + P+ + D ++ FESFR C D T+ Sbjct: 90 YRLLDDLSVHAADEVDPVTGESVADAIRSKFDYLDRISVEDRTPFESFRACGL---DVTF 146 Query: 135 PPIVNP------IVIENNDVPICMKSAGGVIEAIP 163 P+V+P + IE+ + + +G AIP Sbjct: 147 VPVVHPPLVCYGVAIEDPETGAKLSLSGDTTYAIP 181 >gi|77557054|gb|ABA99850.1| hypothetical protein LOC_Os12g42100 [Oryza sativa Japonica Group] Length = 286 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 74/226 (32%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGL 95 +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD I G+D + Sbjct: 103 TSLLIDYCQDEVTHKYILIDVGKTFREQVLRWFIHHKIPCVDSIILTHEHADAILGLDDV 162 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 R IV P N+ Sbjct: 163 R----------------------------------------IVQPFSPTND--------- 173 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 IE PI ++S+ +F Y E + ++ LD+ +I++ Sbjct: 174 ---IEPTPIYLSQFAMNSIAQKF---PYLVRKKLKEGEEVRRVAQLDWRVIESDLQKPFV 227 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L G H+ H ++L ++ I PK A+L M ++D+ Sbjct: 228 TSGLEFVPLPTGSHNVHLCWDQTLDAVKRICPKRALLIGMTHEMDH 273 >gi|134300413|ref|YP_001113909.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053113|gb|ABO51084.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 352 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 22/198 (11%) Query: 49 ERGSNTTVI----VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +RG ++ ++ D G + ++ + + V+ THPH DHI G+D + YF Sbjct: 52 QRGEDSMLVDAGNNDDGEKIIRYLSQQGIKKLSVVMGTHPHEDHIGGLDDVIKYF----- 106 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIE 160 P++ P + H +++R A+ ++ +E+ V I ++ E Sbjct: 107 PVERVYLPK-VNHTTKTYRDVLTAIKNKNLKATAAFGGQTFNLEDARVEILAPNSSEYKE 165 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 L + +S + FG+ A+ +A E L+ L + LK G H SH S Sbjct: 166 ----LNDYSIVSKIS--FGDTAFLLTGDAEMLSEQEMLEKGFDLEANVLKVGHHGSHSST 219 Query: 221 SESLKKIELINPKNAILT 238 + + +NP+ A+++ Sbjct: 220 GDKF--LRAVNPQMAVIS 235 >gi|154151692|ref|YP_001405310.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|154000244|gb|ABS56667.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 262 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 54/236 (22%), Positives = 83/236 (35%), Gaps = 41/236 (17%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 GSN ++++D G +R D A+L TH H DHI G+D L +K Sbjct: 19 GSNGSLLIDAGLSAKETFVRMTKTGCDPDRVAAILVTHEHGDHIRGLD-----VLARKLS 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 VY + R DR P+ I+ + G +P Sbjct: 74 CPVYGTQGTLAEFLSHRRT-----SDR-------PLQIQACQYDTAFSA--GEFRVLPFA 119 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H GF + YCTD + L+ L++ D +++++ L NG + Sbjct: 120 TSHDAAEPCGFVLQENGSKIGYCTDTGIVTSHMLDLLRHCDGVVLESNHCPEMLANGPYP 179 Query: 216 SHFSLSESLKKIELINPKNAILTH------MHVDLDYDMVLKSTPSRV-VPAFDGM 264 + L NP A + V L + + +TP R A DGM Sbjct: 180 ESLKRRIRSNRGHLSNPAAARVLQTLGKDVTQVVLSHLSEINNTPERARASARDGM 235 >gi|110799782|ref|YP_695428.1| hypothetical protein CPF_0981 [Clostridium perfringens ATCC 13124] gi|168212435|ref|ZP_02638060.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|110674429|gb|ABG83416.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124] gi|170716091|gb|EDT28273.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 280 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 46/290 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F I+G G + +P+ + C K R R SL + ++ ++VDT D Sbjct: 3 FRIVGSGGCVSLPKPLCNCEVCKEARSKGRSYSRCGCSLFLDDIN-------LLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAPDC 114 + + ID VL++H DH G+ + LR +L+ + PI+V+A D Sbjct: 56 ITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLELSCGKNCENPIEVFALEDV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 MK + S + F + D Y + N I ++ + I +K+ I+ I H + Sbjct: 116 MKDI-NSIGFKFGSYLD-YYENVRNLIKRKSVEDYIFIKN----IKVSFIKVNHATVFVF 169 Query: 175 GFRFGNVAYC-TDVNAFPAESLEKLQNLDFLII------DALKNG--------LHSSHFS 219 + Y DV FP L N D LII + LK+G L F+ Sbjct: 170 EKEGKKLIYAPCDVKPFPESKL--FLNADCLIIGNTIVGEVLKDGFILKEDNPLRDELFT 227 Query: 220 LSESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQ 265 + + + N K I+TH+ D YD + L+ + A+DGM+ Sbjct: 228 IGDIEELKNKYNIKRVIITHLEEDWGKSYDDYVELEKGLDGIEFAYDGMK 277 >gi|222617482|gb|EEE53614.1| hypothetical protein OsJ_36875 [Oryza sativa Japonica Group] Length = 310 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 74/226 (32%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGL 95 +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD I G+D + Sbjct: 103 TSLLIDYCQDEVTHKYILIDVGKTFREQVLRWFIHHKIPCVDSIILTHEHADAILGLDDV 162 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 R IV P N+ Sbjct: 163 R----------------------------------------IVQPFSPTND--------- 173 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 IE PI ++S+ +F Y E + ++ LD+ +I++ Sbjct: 174 ---IEPTPIYLSQFAMNSIAQKF---PYLVRKKLKEGEEVRRVAQLDWRVIESDLQKPFV 227 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L G H+ H ++L ++ I PK A+L M ++D+ Sbjct: 228 TSGLEFVPLPTGSHNVHLCWDQTLDAVKRICPKRALLIGMTHEMDH 273 >gi|170723134|ref|YP_001750822.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169761137|gb|ACA74453.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 252 Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 28/163 (17%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G + + +L Q + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVQASQLSAVLVTHEHADHVHGVG-----LLSRRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIPIL 165 VY + ++ + + P V + + + I C++ + +E Sbjct: 75 PVYLSQGTLRGMRK--------------PVEVAGFLACGDSLSIGCLQVSAARVEHDAYE 120 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 IS RFG + TD+ ++ A LE+ Q LD L+I+A Sbjct: 121 PLQYVISDGRRRFGML---TDLGSYDALLLERYQGLDALLIEA 160 >gi|282891396|ref|ZP_06299895.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498681|gb|EFB41001.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 265 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 31/165 (18%) Query: 53 NTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T +++D G + L ++ IDA+ TH H DHI G+ L K I Sbjct: 22 HTKILIDAGISGKRIKEELAQLNVELTDIDAIFITHEHTDHIQGLR-----VLAYKLGIP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A + K + E F C K T + G +E P Q Sbjct: 77 VFANHETAKGIVECFHDCPKFKIFTTGESFLF-----------------GDLEVHPFSIQ 119 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H I +GF + +CTD+ + +LQN D+L ++A Sbjct: 120 HDTIDPVGFTIKTDQLKLGFCTDLGFVTSLVRHQLQNCDYLYVEA 164 >gi|315283013|ref|ZP_07871295.1| ribonuclease Z [Listeria marthii FSL S4-120] gi|313613350|gb|EFR87212.1| ribonuclease Z [Listeria marthii FSL S4-120] Length = 306 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F + + +Y +++ S R L TY I N I Sbjct: 71 GLPGLLSSRSFQGGESDLTIYGPAGIAEYIETSLRLSGTRL---TYKIIFNEI 120 >gi|331231750|ref|XP_003328538.1| hypothetical protein PGTG_10497 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307528|gb|EFP84119.1| hypothetical protein PGTG_10497 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 412 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 22/123 (17%) Query: 27 ACDPTNPKNRRTRSSLKISRVSERGSN--TTVIVDTGPDFYMQVLREQVLS-----IDAV 79 A D + KN R +S + S + +T+++D G F + RE IDAV Sbjct: 42 AADGSGRKNVRRNTSAIVRFQSNQNPERPSTILIDVGKSF-CEAAREHFPKHGLDIIDAV 100 Query: 80 LYTHPHADHIHGIDGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 THPHAD I+G+D LR + L + I +Y C + F+ + +P + Sbjct: 101 FLTHPHADAINGLDDLRAWTLGAVIQATIPIY----CNQTTFDEVA--------KIFPYM 148 Query: 138 VNP 140 VNP Sbjct: 149 VNP 151 >gi|238761791|ref|ZP_04622765.1| Beta-lactamase domain protein [Yersinia kristensenii ATCC 33638] gi|238699905|gb|EEP92648.1| Beta-lactamase domain protein [Yersinia kristensenii ATCC 33638] Length = 236 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 34/229 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R T ++D G + L +Q + I L TH H DH+ G+ LR + P+ Sbjct: 30 RYQGETTLIDAG----LPTLDQQFAAGGIQRFLLTHYHIDHVQGLFPLR-WGCTNAIPVY 84 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 A PD L++ R + PI G + P+ Sbjct: 85 GPADPDGCDDLYKHPGILAFQPPLRAFHPI-----------------QFGDLRVTPVPLN 127 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHF 218 H +I+ G+ + +AY TD PA+S L +N+D L+ D + +H Sbjct: 128 HSKIT-FGYLLQSPNRTIAYLTDTIGLPADSALFLASKNIDLLVQDCSHPPQEPAPRNHN 186 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ++ +L EL+ PK +LTH+ LD + + P+ + A D + + Sbjct: 187 DVTMALAISELLKPKTTLLTHVSHQLDAWALDNTLPAGITIAQDNQRIN 235 >gi|14591382|ref|NP_143460.1| PHNP protein [Pyrococcus horikoshii OT3] gi|3258036|dbj|BAA30719.1| 249aa long hypothetical PHNP protein [Pyrococcus horikoshii OT3] Length = 249 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 45/272 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S G+P D C+ R ++ + E G ++ D G D + Sbjct: 6 IGTGGSEGIPVHLCDCNTCNEARKFRFAQRRPSTLAVIGENGE--VILFDVGTD-----I 58 Query: 70 REQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 RE + + +DA+ TH H DHI+G+ LR R ++YA L Sbjct: 59 REFLNVPLDAIFLTHWHHDHIYGLYKLRWI----ARETNLYAPEGHADALI--------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L D P + P +I+ + K G I+ + H +I +LG+ VA Sbjct: 106 LQD---PKNLRPKIIKAGE-----KIRIGDIKVTSVKLNH-QIETLGYIIEEDGKRVAIL 156 Query: 185 TDVNAFPAESLEKLQNLDFL---IIDAL--KNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P E+ E L+++ L I+DA + H +++E++ ++ + + +L+H Sbjct: 157 YDTKGLPPETREYLEDISPLRVAIVDATYPPGFVDPYHNNVNEAV-EMSIDIAERIVLSH 215 Query: 240 M-HVDLDY----DMVLKSTPSRVVPAFDGMQF 266 + H +L + + K +V+ A+DGM F Sbjct: 216 ISHKNLPFLKLVNYTRKMWGGKVLVAYDGMVF 247 >gi|283768806|ref|ZP_06341717.1| putative ribonuclease Z [Bulleidia extructa W1219] gi|283104592|gb|EFC05965.1| putative ribonuclease Z [Bulleidia extructa W1219] Length = 303 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 24/175 (13%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIH 90 T P +R +SL I RG T + G +Q + ID ++ TH HADH Sbjct: 12 TVPLPKRWLTSLYIKL---RGKATLIDCGEGTQIALQEQGLSLKQIDTIILTHYHADHTA 68 Query: 91 GIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL K R PI +Y P +K + + L R P VN I I+ + V Sbjct: 69 GLPGLLLTMAKNNRLEPIRIY-GPKGLKEVIQGV-----TLLARFIPFEVNCIEIDGHSV 122 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDF 203 ++A P++ + LG+RF D+ P +EK + L+ Sbjct: 123 ---FSLEELQVQAFPLIHS---VECLGYRF-------DLKRKPKFLVEKAKALNL 164 >gi|57641813|ref|YP_184291.1| metallo-beta-lactamase superfamily protein [Thermococcus kodakarensis KOD1] gi|57160137|dbj|BAD86067.1| Alkylphosphonate utilization protein PhnP homolog, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 258 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 19/115 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G+ G P+ C NP RRTR SL I ++VD PD + Sbjct: 5 ILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYI--------EGGILVDPSPDLHY 56 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA---APDCMKHL 118 + R ++ V TH H DHI G L+ + + IDVY+ A D KHL Sbjct: 57 HLERLN-RKVEKVFITHAHFDHIAGFPELQVF-----KRIDVYSHRQAIDMAKHL 105 >gi|297722391|ref|NP_001173559.1| Os03g0643250 [Oryza sativa Japonica Group] gi|255674737|dbj|BAH92287.1| Os03g0643250 [Oryza sativa Japonica Group] Length = 553 Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 27/179 (15%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPH 85 P N R +SL I G + +++D G F QVLR ++ +D+++ TH H Sbjct: 43 PERNPNYRCNTSLLIDYCQHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEH 102 Query: 86 ADHIHGID--------GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK----ALDDRT 133 AD + G+D G R K + ++ M + F Y K D+ + Sbjct: 103 ADAVLGLDDVWVVQPSGCRNGLGK----VPIFLTHFTMNSVAARFPYLLKNKLEEGDEGS 158 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVN 188 ++ +IE D+ S+G +E +P+ HG LGF FG +AY +DV+ Sbjct: 159 QVIQLDWTIIE-GDIDKPFVSSG--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVS 214 >gi|197303214|ref|ZP_03168256.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] gi|197297754|gb|EDY32312.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] Length = 265 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT ++VDTG + ++ L + ++ +L TH H+DHI G+ G F +K I Sbjct: 21 NTHLLVDTGISKKRIEEGLKTLDLKGNDLNGILITHEHSDHIQGL----GVF-SRKYQIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA ++ + +S+ K + + Y PI + D P + G I+ P Sbjct: 76 IYATKGTLEGI-KSYSGLGK-MPEGLYHPI-------HTDEPFTL----GDIDIHPFEIS 122 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R +VA TD+ + + +++ LQNLD ++++A Sbjct: 123 HDANEPAGYRLECGAKSVAVATDLGKYDSYTVKNLQNLDAVLLEA 167 >gi|251779298|ref|ZP_04822218.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083613|gb|EES49503.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 360 Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust. Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 21/190 (11%) Query: 56 VIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G + Y + + + +D V+ THPH+DHI G+ + F I + AP Sbjct: 69 ILIDAGNNDSMAYNYLKQLGIKKLDYVMATHPHSDHIGGMTQIINEF-----DIGEFYAP 123 Query: 113 DCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + H ++F KAL ++ T P + + + + N + ++ + Sbjct: 124 K-VNHSTKTFENMIKALQNKGIKLTAPTVGDTLNVGNATLQFLAPNSA------KYEDMN 176 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 + ++GN +Y +A E L + D LK G H SH S S++ ++ Sbjct: 177 NYSIACKLKYGNTSYVFMGDAEALSEGEILAKQLDISADVLKLGHHGSHSSTSQAF--LD 234 Query: 229 LINPKNAILT 238 +NP+ AI++ Sbjct: 235 KVNPRYAIVS 244 >gi|108862966|gb|ABA99851.2| hypothetical protein LOC_Os12g42110 [Oryza sativa Japonica Group] Length = 395 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 74/226 (32%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGL 95 +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD I G+D + Sbjct: 138 TSLLIDYCQDENAHKYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHADAILGLDDV 197 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 R + +SF ND Sbjct: 198 R---------------------IVQSFS--------------------PTND-------- 208 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 IE PI + S+ +F Y E + ++ LD+ +I++ Sbjct: 209 ---IEPTPIYLSQFAMDSIAQKF---PYLVRKKLKEGEEVRRVAQLDWRVIESDLQIPFV 262 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 L G H+ H ++L ++ I PK A+L M ++D+ Sbjct: 263 TSGLEFVPLPTGSHNVHLCWDQTLDAVKRICPKRALLIGMTDEMDH 308 >gi|18977990|ref|NP_579347.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] gi|18893768|gb|AAL81742.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] Length = 249 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 114/272 (41%), Gaps = 45/272 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S G+P + C R ++ + E G ++ D G D + Sbjct: 6 IGTGGSEGIPTHLCECETCSEARRLKFAQRRPSTLAVIGEEGE--VILFDVGTD-----I 58 Query: 70 REQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 RE + + +DA+ TH H DHI+G+ LR R +YA L Sbjct: 59 REFLNVPLDAIFLTHWHHDHIYGLYKLRWI----ARETKLYAPEGHADALI--------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L D P + PI I+ N+ K G I + H ++ +LG+ +VA Sbjct: 106 LQD---PKNLRPITIKANE-----KIKIGKITVTSVRLNH-QVETLGYVIEENGKSVAIL 156 Query: 185 TDVNAFPAESLE---KLQNLDFLIIDALK--NGLHSSHFSLSESLKKIELINPKNAILTH 239 D P+E+ E K+ + I+DA + H ++ E++ ++ + + +L+H Sbjct: 157 YDTKGLPSETREYLLKISPVRTAIVDATYPPGFMDPYHNNVDEAV-EMSIDIAERVVLSH 215 Query: 240 M-HVDLDYDMVLKSTPS----RVVPAFDGMQF 266 + H +L + ++K T +V+ A+D M F Sbjct: 216 ISHKNLPFLKLVKYTRKKWGGKVLVAYDNMVF 247 >gi|289580974|ref|YP_003479440.1| PhnP-like protein [Natrialba magadii ATCC 43099] gi|289530527|gb|ADD04878.1| PhnP-like protein [Natrialba magadii ATCC 43099] Length = 274 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 29/195 (14%) Query: 28 CDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHA 86 CD R + S V ++ +++VD PDF Q LRE V DA + TH H Sbjct: 21 CDTCETARERDIERTRFSVHVENDRTDESLLVDFSPDFRYQFLRESVPLPDAAIITHIHF 80 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAA----PDCMKHLFESFRYCFKALDDRTYPPI--VNP 140 DH+ G+ G + +DV+AA P + + E+ + LD T P + Sbjct: 81 DHLDGL----GNVFRVFDSLDVHAADETDPQTGQSVAETVASDYDYLDAVTVQPTTPLES 136 Query: 141 IVIENNDVPIC------MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 I DV + + G IE Q G SL G+ +Y A P S Sbjct: 137 TRICGFDVTLVPVDHPPLVCYGLAIED----PQTGAKLSLS---GDTSY-----AIPQAS 184 Query: 195 LEKLQNLDFLIIDAL 209 E L + D L+ DA+ Sbjct: 185 REVLADPDLLLADAI 199 >gi|292657030|ref|YP_003536927.1| putative metallo-beta-lactamase family hydrolase [Haloferax volcanii DS2] gi|291372150|gb|ADE04377.1| probable metallo-beta-lactamase family hydrolase [Haloferax volcanii DS2] Length = 192 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 52 SNTTVIVDTGPDFYMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 TT +VDTG +F M +RE S+DAV TH H DHI +D +R F Q D Sbjct: 21 GETTALVDTGANFDMVPTVREVTDSLDAVYLTHTHPDHIGNVDAVREAFDVQTWGYDT 78 >gi|322491805|emb|CBZ27078.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 429 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 16/106 (15%) Query: 7 FTILGCGASLGVPRI---TGDWGACD----PTNPKNRRTRSSLKISRVSERGSNTT---- 55 T +G G S +P I T D D P+ P NRR SL IS G + Sbjct: 9 LTFVGTGVSSAIPVIGHLTTDCACRDAIANPSGP-NRRNNVSLLISLPFSDGKSGVEWHH 67 Query: 56 VIVDTGPDF---YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 V++D G F YM+VL +V +DA+L TH HAD +H ++ L G Sbjct: 68 VLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCG 113 >gi|74318306|ref|YP_316046.1| carbon-phosphorus lyase complex accessory protein [Thiobacillus denitrificans ATCC 25259] gi|74057801|gb|AAZ98241.1| phosphonate metabolism protein, PhnP [Thiobacillus denitrificans ATCC 25259] Length = 255 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 108/286 (37%), Gaps = 65/286 (22%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR-----VSERGSNTTVIVDTGP 62 T LG GA+ GVP D AC R R+ + R + E G T +++D G Sbjct: 4 TFLGTGAAGGVPLYGCDCPAC-------TRARAVVDFRRQPCTALIEAG-ETRILLDAG- 54 Query: 63 DFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC------ 114 + L E+ S + A++ TH H DH+ G+ LR K I VY PD Sbjct: 55 ---LTDLAERFPSGSLSAIVLTHFHPDHVQGLFPLRWGIGKN---IPVYGPPDSEGCADL 108 Query: 115 -MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS- 172 H FR K P+ I N V+ +P++ Sbjct: 109 YKNHGLLEFRRLSK----------FEPVTIGNL-----------VLTPLPLIHSKATFGY 147 Query: 173 ----SLGFRFGNVAYCTDVNAFPAESLEKLQNL--DFLIIDAL---KNGLHSSHFSLSES 223 + G RF AY TD P + L+N +D ++ L +H L+ + Sbjct: 148 AIEDTDGQRF---AYLTDTAGLPPRTEAFLKNWRPASFALDCSYPPQSDLPRNHNDLTLA 204 Query: 224 LKKIELINPKNAILTHMHVDLDYDMV--LKSTPSRVVPAFDGMQFS 267 L E + P LTH+ +LD ++ + P + A+D S Sbjct: 205 LTIAETLAPAKVWLTHVSHELDAWLLENIGDLPPHMAVAYDSQVVS 250 >gi|110800263|ref|YP_696343.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|110674910|gb|ABG83897.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] Length = 284 Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DVFKGMVTALKEK--- 131 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 I + ++ +PI + + P +++G +++ L +G ++ +A Sbjct: 132 DININTLSKSKSLPIDLGENTKIEVYSPSNKEYGNLNNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|293393124|ref|ZP_06637439.1| phosphonate metabolism protein PhnP [Serratia odorifera DSM 4582] gi|291424270|gb|EFE97484.1| phosphonate metabolism protein PhnP [Serratia odorifera DSM 4582] Length = 209 Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 26/201 (12%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 I L TH H DH+ G+ LR I V+ PD + FK + Sbjct: 26 QIQRFLLTHYHMDHVQGLFHLR---WGCGNSIPVFGPPDP-----QGCDDLFKHPGILDF 77 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ---HGRISSLGFRFGNVAYCTDVNAFP 191 P + P V ++ G I +P++ HG + + +AY TD P Sbjct: 78 QPPLAPFV--------SVELGGLQITPLPLIHSKPTHGYLIQTPGK--ALAYLTDTVGLP 127 Query: 192 AESLEKLQ--NLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ LQ +LD L++D + +H L+ +L+ + + P+ +LTH+ LD Sbjct: 128 PQTARFLQHVSLDLLVLDCSLPPQTQAPRNHNDLTRALEIQQRLQPRRTLLTHISHQLDL 187 Query: 247 DMVLKSTPSRVVPAFDGMQFS 267 ++ P + AFD + S Sbjct: 188 WLLDNPLPGGLELAFDNLSVS 208 >gi|150390365|ref|YP_001320414.1| hypothetical protein Amet_2603 [Alkaliphilus metalliredigens QYMF] gi|149950227|gb|ABR48755.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 246 Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 30/201 (14%) Query: 55 TVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 T+I++ G F + L + + + L TH H DH I+ L K IDVY + Sbjct: 23 TLILECGLTFKKIQEGLGYETIKVVGCLVTHEHKDHSKSIEQL------NKNGIDVYTSN 76 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 M+ L Y KA+ + + ++ P + E + L QH + Sbjct: 77 GTMQALGLKESYRLKAIKAQEKIRVGGFTIL-----P--FDTQHDAEEPLGFLIQHQDMG 129 Query: 173 SLGF---------RFGNVAYCTDVNAFPAESLEKLQNLDF-LIIDALKNGLHSSHFSLS- 221 L F +F + + + E L+ QN++ L+++ LKN + SHF L Sbjct: 130 KLLFITDSYYCKYKFKGLDHIMVECNYKKEILQ--QNIEKGLVLECLKNRITKSHFELEN 187 Query: 222 --ESLKKIELINPKNAILTHM 240 E L+ +L N KN +L H+ Sbjct: 188 VKEFLRSSDLSNTKNIVLIHL 208 >gi|188590721|ref|YP_001921478.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188501002|gb|ACD54138.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 360 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 29/194 (14%) Query: 56 VIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G + Y + + + +D V+ THPH+DHI G+ + F I + AP Sbjct: 69 ILIDAGNNDSMAYNYLKKLGIKKLDYVMATHPHSDHIGGMTQIINEF-----DIGEFYAP 123 Query: 113 DCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + H ++F KAL + T P + + + + N + ++ + + Sbjct: 124 K-INHTTKTFENMVKALQSKGIKLTAPTVGDTLNVGNATLQFLAPNSAKYED------MN 176 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEK----LQNLDFLIIDALKNGLHSSHFSLSESL 224 + ++GN +Y V AESL + + LD + + LK G H SH S S++ Sbjct: 177 NYSIACKLKYGNTSY---VFMGDAESLSEGEILAKQLD-ISANVLKLGHHGSHSSTSQAF 232 Query: 225 KKIELINPKNAILT 238 ++ +NP+ AI++ Sbjct: 233 --LDKVNPRYAIVS 244 >gi|255281094|ref|ZP_05345649.1| VicX protein [Bryantella formatexigens DSM 14469] gi|255268542|gb|EET61747.1| VicX protein [Bryantella formatexigens DSM 14469] Length = 265 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 90/231 (38%), Gaps = 51/231 (22%) Query: 54 TTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T+++VD G + + + + ID +L TH H+DHI GI +K + + Sbjct: 22 TSLLVDIGISARQAENGLHTIDRTLPDIDGILITHEHSDHIRGIG-----VAARKAGMPI 76 Query: 109 YAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y + E+ + C +D+ Y I V + D +E +P Sbjct: 77 YGT----RGTLEAVKRCSSLGKIDESLYREIRPDEVFQIGD-----------MEILPFST 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------------- 208 H + +R + A TD+ + +E LQ LD ++++A Sbjct: 122 SHDAAEPVAYRVNSGGKSAAVVTDLGVYNDYIVEHLQGLDAVLLEANHDVRMLQAGAYPY 181 Query: 209 -LKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKST 253 LK + SSH LS L +I N KN L H+ + +Y+ + T Sbjct: 182 YLKQRILSSHGHLSNENAGRLLCRILHDNLKNVFLGHLSQENNYEALAYET 232 >gi|257422310|ref|ZP_05599300.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|257164134|gb|EEU94094.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|315156019|gb|EFU00036.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 276 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 42/283 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R + +I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLC-----KYAREKKGREIRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I +P QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ + N +SH + E+LK I + Sbjct: 171 YAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + I H L Y +M S ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|316932337|ref|YP_004107319.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] gi|315600051|gb|ADU42586.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] Length = 244 Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 35/210 (16%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPI 106 G ++D G + R +L +D +L TH H DH G+ L FLK+KRP+ Sbjct: 26 GQTVNFLIDCGATSMPALKRYGILREDLDLILITHFHGDHFGGLPFLMLDAKFLKRKRPL 85 Query: 107 DVYAAPD-------CMKHLFE-------SFRYCFKALDDRTYPPIVNPI-VIENNDVPIC 151 + P M+ +FE SF AL+ P + + P+ Sbjct: 86 VIAGPPGIDIRLTRLMEAMFEHSSATKPSFDLQVLALE----PGVTRQFGAVTVTPFPVV 141 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK- 210 +GG A + + GRI +AY D + + + + D I +A Sbjct: 142 HGDSGGPFFAYRV-EAEGRI---------LAYSGDTQ-WTDQLVAAAHDADLFICEAYTY 190 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHM 240 + +H SL + INPK ILTHM Sbjct: 191 DRTVKNHISLKALETHLPEINPKRVILTHM 220 >gi|323965753|gb|EGB61205.1| phosphonate metabolism protein PhnP [Escherichia coli M863] gi|327250438|gb|EGE62151.1| phosphonate metabolism protein PhnP [Escherichia coli STEC_7v] Length = 252 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 63/261 (24%), Positives = 97/261 (37%), Gaps = 39/261 (14%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG----SNTTVIVDTGPDFYMQVLREQ 72 GVP + AC R R S + R G ++ ++D G + R Sbjct: 15 GVPAWGCECAAC-------ARARRSPQYRRQPCSGVVKFNDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNA 189 + V P V+ G ++ P+ H +++ L VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKLTFGYLLETAHNRVAWLSDTAG 167 Query: 190 FPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 P +L+ L N ++ID + + +H L+ L E+I ILTH+ Sbjct: 168 LPENTLKFLLNNHPQVMVIDCSHPPREDVPRNHCDLNTVLALNEIIRSPRVILTHISHQF 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQ 265 D ++ + PS V FDGM+ Sbjct: 228 DAWLMENTLPSGVEAGFDGME 248 >gi|169346942|ref|ZP_02865890.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169297001|gb|EDS79125.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 280 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 117/292 (40%), Gaps = 46/292 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F I+G G + +P+ + C K + R SL + ++ ++VDT D Sbjct: 3 FIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFLDDIN-------LLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFL------KQKRPIDVYAAPDC 114 + + ID VL++H DH G+ + LR +L + PI+V+A D Sbjct: 56 ITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLDVSCGKNCENPIEVFALEDV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 MK + S + F + D Y + N I ++ + I +K I+ I H + Sbjct: 116 MKDI-NSIGFKFGSYLD-YYENVRNLIKRKSVEDYISIKD----IKVSFIKVNHATVFVF 169 Query: 175 GFRFGNVAYC-TDVNAFPAESLEKLQNLDFLII------DALKNG--------LHSSHFS 219 + Y DV FP L N D LII + LK+G L F+ Sbjct: 170 EKEGKKLIYAPCDVKPFPESKL--FLNADCLIIGNTIVGEVLKDGFILKEDNPLRDELFT 227 Query: 220 LSESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQFS 267 + + + N K I+TH+ D YD + L+ + A+DGM+ Sbjct: 228 IGDIEELKNKYNIKRVIITHLEEDWGKSYDDYVELEKGLDGIEFAYDGMKIE 279 >gi|71279881|ref|YP_268729.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] gi|71145621|gb|AAZ26094.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] Length = 265 Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 44 ISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I +S + ++ +VD G ++ L+E L++ A+L TH H+DH+ GI+ L Y + Sbjct: 19 IWAISSQNNDKIALVDPGDAVVCIKYLQENNLALSAILITHHHSDHVGGIEKLLEYSKDK 78 Query: 103 KRPIDVYA 110 P+ VY Sbjct: 79 AWPVTVYG 86 >gi|187932604|ref|YP_001884819.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187720757|gb|ACD21978.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 357 Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 21/190 (11%) Query: 56 VIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G + Y + + + ID V+ THPH+DHI G+ + F I + AP Sbjct: 69 ILIDAGNNDSMAYNYLKQLGIKKIDYVMITHPHSDHIGGMTQIINEF-----DIGEFYAP 123 Query: 113 DCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + H ++F KAL + T P + + I N + ++ + + Sbjct: 124 K-VNHTTKTFENMIKALQSKGIKLTAPTPGDTLNIGNATLQFLAPNSAKYED------MN 176 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 + ++GN +Y +A E L + D LK G H SH S S++ ++ Sbjct: 177 NYSIACKLKYGNTSYVFMGDAEALSEGEILAKQLDISADVLKLGHHGSHSSTSQTF--LD 234 Query: 229 LINPKNAILT 238 +NP+ AI++ Sbjct: 235 KVNPRYAIVS 244 >gi|123440844|ref|YP_001004835.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087805|emb|CAL10591.1| PhnP protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 255 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 100/280 (35%), Gaps = 48/280 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP C P RR S + R T ++D G Sbjct: 3 LTLLGTGCAQQVPVFGCQCVICTKARLKPALRRQSCSAML-----RYQGETTLIDAGLPA 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD---CMKHLFES 121 Q+ I L TH H DH+ G+ LR I VY PD C Sbjct: 58 LEQLFAGG--QIQRFLLTHYHMDHVQGLFPLR---WGCGNAIPVYGPPDPDGCDDLYKHP 112 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 F+ PP+ I+ D + P+ H +I+ G+ + Sbjct: 113 GILAFQ-------PPLSAFHPIQFGD-----------LRVTPVPLNHSKIT-FGYLLQSP 153 Query: 181 ---VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSS--------HFSLSESLKKI 227 +AY TD PA+S L +N+D L+ D H S H ++ +L Sbjct: 154 NRTIAYLTDTIGLPADSALFLASKNIDLLVQDCSHPPHHLSPHRPPPRNHNDVTMALAIS 213 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 EL+ P +LTH+ LD + + P V A D S Sbjct: 214 ELLKPAATLLTHISHQLDSWALDNTLPDGVTIAQDNQIIS 253 >gi|153955029|ref|YP_001395794.1| ribonuclease Z [Clostridium kluyveri DSM 555] gi|219855470|ref|YP_002472592.1| hypothetical protein CKR_2127 [Clostridium kluyveri NBRC 12016] gi|189043782|sp|A5MZX7|RNZ_CLOK5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808624|sp|B9E3V3|RNZ_CLOK1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|146347887|gb|EDK34423.1| Rnz [Clostridium kluyveri DSM 555] gi|219569194|dbj|BAH07178.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 303 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 19/87 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG S+ +P +R + + VS +G + G +++ Sbjct: 6 LLGCGGSMPIP---------------DRNLTAMI----VSYQGRKLLIDCGEGTQVSLKI 46 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGL 95 L ++ +ID +L+TH HADHI G+ GL Sbjct: 47 LGWKIRNIDVILFTHFHADHIAGLPGL 73 >gi|27362883|gb|AAN86996.1| PhnP-like protein [Pectobacterium carotovorum subsp. carotovorum] Length = 195 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 33/198 (16%) Query: 79 VLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-TYPP 136 +L TH H DH+ G+ LR GY PI V+ PD DD +P Sbjct: 15 ILLTHYHMDHVQGLFPLRWGY----GDPIPVFGPPDE------------AGCDDLFKHPG 58 Query: 137 IVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISS---LGFRFGNVAYCTDVNAFPA 192 I++ + +P G+ I +P++ H +++ + +AY TD P Sbjct: 59 ILH---FQPPLIPFQPFELDGISITPVPLI--HSKLTYGYLIQTPMHTLAYLTDTVGLPP 113 Query: 193 ESLEKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 E+++ L +LD+ I+D + +H ++ +L+ +NPK LTH+ +LD Sbjct: 114 ETVQFLASHSLDYAIVDFSHPPQTTPPRNHNDITRALEIFTQLNPKQLYLTHIGHELDRW 173 Query: 248 MVLKS-TPSRVVPAFDGM 264 + ++ P V A+DG+ Sbjct: 174 LQTQTLLPENVHAAYDGL 191 >gi|15790909|ref|NP_280733.1| ATP-binding protein [Halobacterium sp. NRC-1] gi|169236654|ref|YP_001689854.1| phnP-like protein [Halobacterium salinarum R1] gi|10581480|gb|AAG20213.1| ATP-binding protein [Halobacterium sp. NRC-1] gi|167727720|emb|CAP14508.1| phnP-like protein [Halobacterium salinarum R1] Length = 273 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 9/92 (9%) Query: 24 DWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI-DAVLY 81 D C + RTR S+ V++ S +++D PDF Q LR LS+ DA + Sbjct: 20 DCATCQAARERGVERTRFSVH---VADEASGDALLIDFSPDFRAQFLRTDALSLPDAGVV 76 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 TH H DH+ G+ Y L P VYAA D Sbjct: 77 THVHFDHLDGLG--NAYRLFDDLP--VYAATD 104 >gi|242238759|ref|YP_002986940.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech703] gi|242130816|gb|ACS85118.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech703] Length = 249 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 33/266 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G + VP D AC+ R R S + R + ++D G Sbjct: 3 LMFMGTGDAQQVPLTGCDCIACERARRDPRFRRGP---SSMLVRCDDEATLLDAGVTQLE 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q R V I +L TH H DH+ G+ LR + + + P V+ PD + + Sbjct: 60 Q--RFGVNEIRRILLTHYHVDHVQGLFSLR-WGIGDRIP--VFGPPD--EQGCDDLYKHP 112 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVA 182 + LD + P + P P+ M + + A+P+ H R + G+ +VA Sbjct: 113 RRLD---FQPPMTPFQ------PVAMGAL--RVTALPL--NHSR-PTFGYLLECNGQSVA 158 Query: 183 YCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAIL 237 Y TD P + + L + LD +++D ++ +H L+ L+ + + P L Sbjct: 159 YLTDTGDLPDATRDFLHGRRLDHMVMDCTQPPRDQPPLNHSDLNTVLRVRDQLRPTQTWL 218 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDG 263 TH+ D D ++L P V A DG Sbjct: 219 THISHDTDAWLMLNDLPDGVRAAADG 244 >gi|67924196|ref|ZP_00517637.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] gi|67853950|gb|EAM49268.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] Length = 315 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 11/136 (8%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + ++++RG + D G Q+LR ++ I + TH H DH++ Sbjct: 13 PTRSRNVSSVAL-KLTQRGE--VWLFDCGEGTQHQLLRSDVKISQITRIFVTHMHGDHVY 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENND 147 G+ GL +PI++Y P+ +L +Y FK + PI I+ E+ + Sbjct: 70 GLAGLLASCGLAGSGQPIEIYGPPELKDYLHACAKYSHFKLPHHIRFHPIHPGILYEDKE 129 Query: 148 VPICMKSAGGVIEAIP 163 + S G + IP Sbjct: 130 FSV---SCGPLKHRIP 142 >gi|255521968|ref|ZP_05389205.1| hypothetical protein LmonocFSL_12232 [Listeria monocytogenes FSL J1-175] Length = 251 Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 20/97 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK LG GA + P R +S+ +S ++ER NT + D Sbjct: 1 MKQIMELVFLGTGAGV----------------PSRGRNVTSIALSMLNER--NTIWLFDC 42 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 G Q++R Q+ ++ + TH H DHI G+ GL Sbjct: 43 GEATQHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGL 79 >gi|296114658|ref|ZP_06833311.1| Beta-lactamase-like protein [Gluconacetobacter hansenii ATCC 23769] gi|295979014|gb|EFG85739.1| Beta-lactamase-like protein [Gluconacetobacter hansenii ATCC 23769] Length = 222 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 49 ERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +R S V+VD G D +QV+ ++ L++DA++ TH H DH G D LR ++ + Sbjct: 26 DRRSRHAVVVDPGGDVPRLLQVIADKNLTVDAIILTHGHLDHAGGADALRDALTTRQDGV 85 Query: 107 DV-YAAPDCM-KHLFES 121 V PD + L ES Sbjct: 86 TVPLIGPDARDQFLLES 102 >gi|168216201|ref|ZP_02641826.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] gi|182381924|gb|EDT79403.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] Length = 280 Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust. Identities = 72/292 (24%), Positives = 118/292 (40%), Gaps = 46/292 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F I+G G + +P+ + C K + R SL + ++ ++VDT D Sbjct: 3 FIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFLDDIN-------LLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAPDC 114 + + ID VL++H DH G+ + LR +L+ + PI+V+A Sbjct: 56 ITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEASCGKNCENPIEVFALEGV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 MK + S + F + D Y + N I ++ D I +K I+ I H + Sbjct: 116 MKDI-NSIGFKFGSYLD-YYENVRNLIKRKSVDDYIYIKD----IKVSFIKVNHATVFVF 169 Query: 175 GFRFGNVAYC-TDVNAFPAESLEKLQNLDFLII------DALKNG--------LHSSHFS 219 + Y DV FP L + D LII + LK+G L F+ Sbjct: 170 EKEGKKLIYAPCDVKPFPESKL--FLDADCLIIGNTIVGEVLKDGFILKEDNPLRDELFT 227 Query: 220 LSESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQFS 267 +S+ + N K I+TH+ D YD + L+ + A+DGM+ Sbjct: 228 ISDIEELKNKYNIKRVIITHLEEDWGKSYDDYVELEKELDGIEFAYDGMKIE 279 >gi|242399039|ref|YP_002994463.1| Phosphonate matabolism protein PhnP like protein, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] gi|242265432|gb|ACS90114.1| Phosphonate matabolism protein PhnP like protein, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] Length = 252 Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust. Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 58/278 (20%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S G+P C+ R ++ +++ +N V++D G D + Sbjct: 10 IGTGGSEGIPAHLCTCETCEEARKLGFAQRKPSTLAIITK--NNKAVLIDVGTD-----I 62 Query: 70 REQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 R+ + + ++A+L TH H DHI+G+ LR KR I AP+ Sbjct: 63 RDLLHVPLEAILLTHWHHDHIYGLYKLRWI---AKRTI--LYAPN--------------- 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE----AIPILQQHGRISSLGFRF----GN 180 D + I +P ++ + AG V+ I L+ + ++ +LG+ Sbjct: 103 -GDADWLMINDP-----KNIEVKFIKAGDVLNIDSLKITALKLNHQVETLGYLIEEDDKR 156 Query: 181 VAYCTDVNAFPAESLE--KLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELINPK 233 VA D P E+ E K + L +I DA + + H++ +E+ K+ + Sbjct: 157 VAVLYDTKGLPEETFEILKEKKLRLVISDATYSPEINDPYHNNVDEGAETGLKL----AE 212 Query: 234 NAILTHM-HVDLDY----DMVLKSTPSRVVPAFDGMQF 266 +L+H+ H +L + + V + +V+ A+DGM F Sbjct: 213 RTLLSHISHKNLPFLKLEEYVRRKYNGKVLVAYDGMLF 250 >gi|229828894|ref|ZP_04454963.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] gi|229792057|gb|EEP28171.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] Length = 245 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 12/136 (8%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 L +DA+L TH H+DHI G+ L +K + +YA + + + + +D Sbjct: 23 LDMDAILLTHEHSDHISGLG-----VLARKYHLPIYATQGTIDAV--ATKRSLGTIDPSL 75 Query: 134 YPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 Y I D+ IC M + A P+ + + G + VA CTD+ A+ Sbjct: 76 YHVIRPDQTFTIGDMEICPMHISHDA--ADPVAYTMRQRTEDGDK--RVAVCTDLGAYDD 131 Query: 193 ESLEKLQNLDFLIIDA 208 ++E+LQ +D ++++A Sbjct: 132 YTIERLQGMDAMLLEA 147 >gi|78486428|ref|YP_392353.1| carbon-phosphorus lyase complex accessory protein [Thiomicrospira crunogena XCL-2] gi|78364714|gb|ABB42679.1| phosphonate metabolism accessory protein [Thiomicrospira crunogena XCL-2] Length = 255 Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 37/250 (14%) Query: 7 FTILGCGASLGVPRITGDWGACD-PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F+ LG G+ P D AC + + R +++ + V+ ++D G Y Sbjct: 7 FSFLGTGSVKAAPVYGCDCIACQRALSNQTYRRQAACGVLEVN----GVRFLIDAG---Y 59 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + L E+ S+DAVL TH H DH+ G+ +R + + + P+ P LF+ Sbjct: 60 LG-LEEKFPPGSLDAVLLTHFHMDHVQGLFPIR-WGMGESIPVFSPDDPHGCDDLFK--- 114 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGN 180 YP I + +P G I+ P+ H +++ + F Sbjct: 115 ----------YPGIFD---FSKKSLPFEPFHFKG-IKITPVPLVHSKLTMGYIVEFNGKR 160 Query: 181 VAYCTDVNAF--PAESLEKLQNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNA 235 +AY D E+L K LD LI+D + +H L+ +L E I PK Sbjct: 161 LAYLCDSGILRRDVEALLKEHPLDLLILDCDQPPQEKAPRNHNDLTRALDVYESIQPKQL 220 Query: 236 ILTHMHVDLD 245 I TH+ LD Sbjct: 221 IFTHISHHLD 230 >gi|330813167|ref|YP_004357406.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486262|gb|AEA80667.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] Length = 49 Score = 42.0 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + + ID V +TH HADHI GI+ LR +++K K+ + Sbjct: 1 MANNITEIDYVFFTHSHADHIFGINELRTFWIKNKKKL 38 >gi|238799280|ref|ZP_04642725.1| Beta-lactamase domain protein [Yersinia mollaretii ATCC 43969] gi|238716884|gb|EEQ08755.1| Beta-lactamase domain protein [Yersinia mollaretii ATCC 43969] Length = 210 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 36/232 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR---GYFLKQKR 104 R T ++D G + L +Q + I L TH H DH+ G+ LR G + Sbjct: 3 RYREETTLIDAG----LPTLDQQFAAGEIQRFLLTHYHMDHVQGLFPLRWGCGNSIPVYG 58 Query: 105 PIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAI 162 P D D KH +F+ +A + + V P+ + ++ + Sbjct: 59 PPDPDGCDDLYKHPGILAFQPPLRAFHSVRFGQLQVTPVPLNHSKITFGY---------- 108 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSH 217 +LQ H R +AY TD PA+S L +N+D L++D + +H Sbjct: 109 -LLQSHNR---------TLAYLTDTIGLPADSALFLASKNIDLLVMDCSHPPQIPPPRNH 158 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 ++ +L +L+ P +LTH+ LD ++ S P+ V A D + P Sbjct: 159 NDITMALAIGDLLMPTALLLTHISHQLDRWLLDNSLPAGVTIAHDNQTIALP 210 >gi|182624979|ref|ZP_02952757.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|177909776|gb|EDT72194.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] Length = 280 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 50/292 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F I+G G + +P+ + C K + R SL + ++ ++VDT D Sbjct: 3 FIIVGSGGCVSLPKPLCNCEVCKEARSKGKLYSRCGCSLFLDDIN-------LLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAPDC 114 + + ID VL++H DH G+ + LR +L+ + PI+V+A D Sbjct: 56 ITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEVSCGKNCENPIEVFALEDV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 MK + S + F + D Y + N I ++ + I +K+ I+ I H + Sbjct: 116 MKDI-NSIGFKFGSYLD-YYENMRNLIKRKSVEDYIFIKN----IKVSFIKVNHTTVFVF 169 Query: 175 GFRFGNVAYC-TDVNAFPAESLEKLQNLDFLII------DALKNG--------LHSSHFS 219 + Y DV FP L N D LII + LK+G L F+ Sbjct: 170 EKEGKKLIYAPCDVKPFPESKL--FLNADCLIIGNTIVGEVLKDGFILKEDNPLRDELFT 227 Query: 220 LS--ESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQ 265 +S E LK N K I+TH+ D YD + L+ + A+DGM+ Sbjct: 228 ISNIEGLKN--KYNIKRVIITHLEEDWGKSYDDYVELEKGLDGIEFAYDGMK 277 >gi|229086713|ref|ZP_04218880.1| Ribonuclease Z [Bacillus cereus Rock3-44] gi|228696587|gb|EEL49405.1| Ribonuclease Z [Bacillus cereus Rock3-44] Length = 307 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG GA + P R SS+ + + ERG T + D G Sbjct: 3 FVFLGTGAGV----------------PSKGRNVSSIALQLLEERGE--TWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 45 QILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|323190025|gb|EFZ75303.1| phosphonate metabolism protein PhnP [Escherichia coli RN587/1] Length = 252 Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 26/199 (13%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 S L TH H DH+ G+ LR Q I VY PD + FK + Sbjct: 68 SFQQFLLTHYHMDHVQGLFPLRWGVGNQ---IPVYGPPD-----EQGCEDLFKHPGLLDF 119 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNAFP 191 V P V+ + ++ P+ H +++ L VA+ +D P Sbjct: 120 SHTVEPFVVFDLQG----------LQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLP 169 Query: 192 AESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++L+ L+N ++ID + +H L+ L ++I ILTH+ D Sbjct: 170 EKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDA 229 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 ++ + PS FDGM+ Sbjct: 230 WLMENALPSGFEAGFDGME 248 >gi|242075728|ref|XP_002447800.1| hypothetical protein SORBIDRAFT_06g015980 [Sorghum bicolor] gi|241938983|gb|EES12128.1| hypothetical protein SORBIDRAFT_06g015980 [Sorghum bicolor] Length = 349 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 26/178 (14%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKAL----D 130 ++ TH HAD + G+D + + R I ++ M + F Y + D Sbjct: 145 IILTHEHADAVLGLDEVWVVQPRNGRNDIEQIPIFLTQFTMDSISRRFPYLIEQKPEDGD 204 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDV 187 + ++ +IE +DV ++G +P++ G I LGF FG VAY +DV Sbjct: 205 EDAQAAKIDWKIIE-DDVDKPFVASGLEFMPLPVMHGEGYI-CLGFLFGRRSKVAYLSDV 262 Query: 188 NAFPAESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + F ++ + LD LI++A N LH SL I+ I PK A+L M Sbjct: 263 SRFLPKTEHVISKSGAGQLDLLILEA--NTLHGV------SLDAIKRIRPKGALLIGM 312 >gi|315640894|ref|ZP_07895990.1| ribonuclease Z [Enterococcus italicus DSM 15952] gi|315483312|gb|EFU73812.1| ribonuclease Z [Enterococcus italicus DSM 15952] Length = 307 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+LR + I+ + TH H DHI Sbjct: 13 PAKHRNVTSIALKLLDER--NKIWLFDCGEGTQMQILRTTIKPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-TYPPIVNPIVIENND 147 G+ GL F +D+Y + + S R L + + + + IV E++ Sbjct: 71 GLPGLLSSRSFQGGNESLDIYGPKGVEEFVRTSLRISRSRLGYKLNFYEVTDGIVFEDHQ 130 Query: 148 VPICMKS 154 + K Sbjct: 131 FTVFAKK 137 >gi|257079255|ref|ZP_05573616.1| predicted protein [Enterococcus faecalis JH1] gi|294780254|ref|ZP_06745625.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|307269427|ref|ZP_07550770.1| hypothetical protein HMPREF9498_01564 [Enterococcus faecalis TX4248] gi|256987285|gb|EEU74587.1| predicted protein [Enterococcus faecalis JH1] gi|294452682|gb|EFG21113.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|306514266|gb|EFM82838.1| hypothetical protein HMPREF9498_01564 [Enterococcus faecalis TX4248] gi|315147512|gb|EFT91528.1| conserved hypothetical protein [Enterococcus faecalis TX4244] Length = 276 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 42/283 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R + +I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLC-----KYAREKKGREIRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I +P QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ + N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + I H L Y +M S ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|291613975|ref|YP_003524132.1| hydroxyacylglutathione hydrolase [Sideroxydans lithotrophicus ES-1] gi|291584087|gb|ADE11745.1| hydroxyacylglutathione hydrolase [Sideroxydans lithotrophicus ES-1] Length = 253 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 50 RGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R N VIVD G + L+ L +DA+L TH H DH+ GI+ LRG + Sbjct: 19 RRDNHAVIVDPGEAALVLDYLQANSLQLDAILCTHRHHDHVDGIEELRGVY 69 >gi|147919854|ref|YP_686395.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110621791|emb|CAJ37069.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 268 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 50/244 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-----------RGY 98 + ++VD GP M+ + + ++D ++ +H H DH + ++ + RG Sbjct: 31 AGKNILVDPGPGSLMRSVELGLKPANLDCIVLSHKHIDHSNDVNIMIEAMSGGSFRPRGI 90 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-VIENNDVPICMKSAGG 157 L P D D + RY RTY I N I V+E P S G Sbjct: 91 LLA---PSDALEGDDPV-----VLRYV------RTY--IRNNIKVLE----PGFKYSLDG 130 Query: 158 VIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 V + + H + S G +F + Y TD F E + D+LI++ ++ Sbjct: 131 VGIEVAVRMMHANVESYGLKFTFDGKTLGYITDTKYFNGLP-EAFKGCDYLIVNMVRM-T 188 Query: 214 HSSHFS--LSESLKKI-ELINPKNAILTH--MHV-----DLDYDMVLKSTPSRVVPAFDG 263 H + F L E + +I ++ P+ IL H M V D + K + R + DG Sbjct: 189 HDARFEHLLPEDVIRILKVAKPRQVILNHFGMQVVKARPDAVARRIEKESRVRTIAGADG 248 Query: 264 MQFS 267 MQFS Sbjct: 249 MQFS 252 >gi|281358144|ref|ZP_06244628.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281315517|gb|EFA99546.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 282 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 29/215 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG AS +P + W C+ R +L+ G +T +VD GPD Sbjct: 3 LQFLGSAASESIPAL---WCECENCRKAARLGGRNLRRRTAYLVGDHT--LVDFGPDANW 57 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R ++ +L TH H DH ++ L F RP+ ++ ++ L Sbjct: 58 QAKEFRLDPSKVERLLVTHSHVDHFSPVELLWRSRNFSAVNRPLRLFCNEAVLRELENRV 117 Query: 123 RYC---FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRF 178 R C A D R P + P P+ G +E +PI HG +L F Sbjct: 118 RSCGMGSGAADVRVEPVPLRP------GAPV----TDGALEILPIRASHGEGECALNFLL 167 Query: 179 G----NVAYCTDVNAFPAESLE--KLQNLDFLIID 207 N+ D +P ES E + + LD +I+ Sbjct: 168 SEAGRNILIANDTGWWPPESWELVRGRKLDAAVIE 202 >gi|325661249|ref|ZP_08149876.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|331084995|ref|ZP_08334082.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472756|gb|EGC75967.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408695|gb|EGG88160.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 265 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T +++DTG + ++ L + +D +L TH H+DHI G+ G F +K I Sbjct: 21 HTHLLIDTGISKKRIEEGLKNLEIKGEELDGILLTHEHSDHIQGL----GVF-SRKYEIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA P ++ + E +K L + + + DV +EA I Sbjct: 76 VYATPGTIRGVRE-----YKKLGE------IPDGLFHEIDVDQKFTLGDLSVEAFAI--S 122 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R +VA TD+ + ++ KLQNLD ++++A Sbjct: 123 HDANEPSGYRIEQGGQSVAVATDLGIYDEYTVSKLQNLDAVLLEA 167 >gi|307353806|ref|YP_003894857.1| ribonuclease Z [Methanoplanus petrolearius DSM 11571] gi|307157039|gb|ADN36419.1| ribonuclease Z [Methanoplanus petrolearius DSM 11571] Length = 308 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 RGS+T ++ D G Q++R + ++DAV TH HADH G+ GL F+ +K P+ Sbjct: 26 RGSDT-LLFDCGEGAQQQMMRAKTGFTVDAVFITHWHADHYLGLPGLVQTMSFMGRKEPL 84 Query: 107 DVYA 110 VY Sbjct: 85 YVYG 88 >gi|40787179|gb|AAR90100.1| HtxN [Pseudomonas stutzeri] Length = 255 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 103/266 (38%), Gaps = 53/266 (19%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 + LG GA+ GVP AC+ + R S + E G T V++D G + Sbjct: 4 SFLGTGAAGGVPLYGCTCRACERARTEPHFVRR--PCSALIESG-GTRVLLDAG----LM 56 Query: 68 VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 L E+ S+DA++ TH H DH+ G+ LR + PI VY PD E Sbjct: 57 DLHERFAPGSLDAIVLTHYHPDHVQGLFHLR---WGKGTPITVYGPPDS-----EGCADL 108 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV---- 181 FK +P V+ V G + P+ H + +LG+ Sbjct: 109 FK-----------HPGVLAFETVHKFEAFTVGALRLTPLPLLHSK-PTLGYAIEGTQGQR 156 Query: 182 -AYCTDVNAFPAESLEKLQNL-DF-LIIDAL---------KNGLHSSHFSLSESLKKIEL 229 AY TD P +S + L+ DF + ID N +H ES +I Sbjct: 157 FAYLTDTLGLPPKSAKFLRAWGDFDMAIDCSYPPHPTPKNHNDWDEAHRCAIESGARITW 216 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPS 255 LTH LD D +++ TPS Sbjct: 217 -------LTHAGHALD-DWMMEETPS 234 >gi|21226408|ref|NP_632330.1| ribonuclease Z [Methanosarcina mazei Go1] gi|41017564|sp|Q8Q032|RNZ_METMA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|20904666|gb|AAM30002.1| metal dependent hydrolases [Methanosarcina mazei Go1] Length = 305 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%) Query: 56 VIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAA 111 ++ D G Q++R + ++S+ ++ +H HADH GI GL FL +K P+ +Y Sbjct: 32 LLFDCGEGTQQQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFLGRKEPLTIY-G 90 Query: 112 PDCMKHLFESFR---YC 125 P+ K E F+ YC Sbjct: 91 PEGTKEFTEVFKVLGYC 107 >gi|3256649|dbj|BAA29332.1| 257aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 257 Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 15/88 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--F 64 ILG G+ G P+ C NP RRTR S+ I E G +++D GPD + Sbjct: 5 ILGSGSYSGTPKPLCTCENCTRARINPAFRRTRFSVYI----EGG----ILIDPGPDLHY 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGI 92 +++ L ++V + +L TH H DHI G+ Sbjct: 57 HLEKLNKEV---ETILITHAHFDHIFGL 81 >gi|187735154|ref|YP_001877266.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425206|gb|ACD04485.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 259 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 57/226 (25%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQ 102 R T ++VD G F LR+++ S +DA+L TH HADH+ G+ + + Sbjct: 19 RAGETVLLVDAG--FSAARLRDKMKSAGVEPDELDAILLTHEHADHMKGV-----HQFTR 71 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K + VYA + E A ++ + IVI Sbjct: 72 KHAVRVYATRHTAMCVQEKAPEAPWAYFEKGQSFRIGDIVI------------------T 113 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---------- 208 P H + +GF+F ++ + +D P E L +D L++++ Sbjct: 114 PFPTYHDAVDPVGFKFETERSSLGFISDTGQAPGCIAEYLAMVDSLVVESNYDPDMLAAT 173 Query: 209 ------LKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD 243 LK + S+H LS L++I KN +L H+ + Sbjct: 174 PRRPWPLKQRIASAHGHLSNGQACDLLRRIAHGALKNVVLAHLSAE 219 >gi|269127473|ref|YP_003300843.1| DNA internalization-related competence protein ComEC/Rec2 [Thermomonospora curvata DSM 43183] gi|268312431|gb|ACY98805.1| DNA internalization-related competence protein ComEC/Rec2 [Thermomonospora curvata DSM 43183] Length = 792 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Query: 51 GSNTTVIVDTGPDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 G + V+VD GPD + + R +V ++ ++ THPHADHI G G+R Sbjct: 562 GKGSAVVVDAGPDPGLADACLDRLKVQTVPLLVLTHPHADHIGGTPGIR 610 >gi|225848125|ref|YP_002728288.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643649|gb|ACN98699.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 228 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 40/220 (18%) Query: 55 TVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +I+D GP +++ + ++ V+ +H H DH+ + + V +A Sbjct: 9 NIIIDPGPGSLIRMFERGLEPRDLNVVVLSHRHLDHVADVASV------------VESAT 56 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP------ICMKSAGGVIEA----- 161 D K+ + + ALD +P+V++ I MK+ + E Sbjct: 57 DANKNKLDLLLAPYDALDGE------DPVVLKYTKKGFKRIEIISMKNQYQLEEITIRPL 110 Query: 162 IPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKL-QNLDFLIIDA--LKNGLHSSH 217 IP + Q + SL FR+ + + F + L QN D ++ + +K L+ H Sbjct: 111 IPHIHQGATVYSLEFRYKDKIFIYVPCGKFYEDMLYAYPQNPDLMVFNTTFVKPNLNYYH 170 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 S E K I+ + PK +LTH +++ LK+ P +V Sbjct: 171 LSAEEVEKIIDKVRPKKVVLTHFSINM-----LKANPKKV 205 >gi|116873412|ref|YP_850193.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466485|sp|A0AK82|RNZ_LISW6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116742290|emb|CAK21414.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 306 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER T + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--KTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F I +Y +++ S R L TY I N I Sbjct: 71 GLPGLLSSRSFQGGDSTITIYGPAGIAEYVETSLRLSGTRL---TYKIIFNEI 120 >gi|255951856|ref|XP_002566694.1| Pc24g00340 [Penicillium chrysogenum Wisconsin 54-1255] gi|211904316|emb|CAP86942.1| Pc24g00340 [Penicillium chrysogenum Wisconsin 54-1255] Length = 535 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 18/124 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA----FPAE 193 VN + +D +C+ + GG +E + + +HGRI DVN F Sbjct: 422 VNESTVATHDTALCIAARGGDLEVVREILRHGRI--------------DVNLRNQWFEDP 467 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ F I+DAL +HFSL SL + + AI + ++ D +LK + Sbjct: 468 LMLAVRGGHFSIVDALVANPRLTHFSLRRSLDLAKDYRIQRAIRSRIYDDNTTKKLLKRS 527 Query: 254 PSRV 257 P R+ Sbjct: 528 PRRI 531 >gi|119490850|ref|ZP_01623133.1| ribonuclease Z [Lyngbya sp. PCC 8106] gi|119453668|gb|EAW34827.1| ribonuclease Z [Lyngbya sp. PCC 8106] Length = 315 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+S+R + D G Q LR ++ I + TH H DH+ Sbjct: 13 PTRSRNVSSIAL-RLSQRAE--LWLFDCGEGTQHQFLRSDLKISQISRIFVTHMHGDHVF 69 Query: 91 GIDGLR---GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL G KR ID+Y P ++L S R+ + +YP V+P+ Sbjct: 70 GLTGLLASCGLAGNVKR-IDLYGPPGLQEYLQASLRFSQTHI---SYPFTVHPV 119 >gi|110668991|ref|YP_658802.1| PhnP-like protein [Haloquadratum walsbyi DSM 16790] gi|109626738|emb|CAJ53205.1| PhnP-like protein [Haloquadratum walsbyi DSM 16790] Length = 274 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 32/199 (16%) Query: 24 DWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYT 82 D C+ + RTR S+ I N ++++D PDF Q L+ V DA + T Sbjct: 20 DCNTCEHARQRGIERTRFSVHIENPRR---NESILIDFSPDFRQQFLQRNVSFPDAGIIT 76 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAA----PDCMKHLFESFRYCFKALDDRTYPP-- 136 H H DH+ G+ Y L PI +AA P + + E+ + LD T P Sbjct: 77 HIHFDHLDGLGN--AYRLCDDLPI--HAANETDPQTTETVAETVARKYSYLDQVTVNPHS 132 Query: 137 ---IVNPIVIENNDVPI---CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 + +E VP+ + G VIE P+ +S G+ +Y Sbjct: 133 PFEVFEICGLEIQLVPVDHPPLYCYGVVIED-PVTDTKLSLS------GDTSY-----GV 180 Query: 191 PAESLEKLQNLDFLIIDAL 209 P+ES + L N D + DA+ Sbjct: 181 PSESQDALSNPDLFLADAI 199 >gi|224368802|ref|YP_002602963.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] gi|223691518|gb|ACN14801.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] Length = 549 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 28/197 (14%) Query: 52 SNTTVIVDTG---PDFYM----------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +T V++D G P+ YM + LRE + AV+ TH H DHI I Y Sbjct: 23 GDTIVVIDAGLMFPEDYMLGVDIVIPEMEYLRENRDRLKAVVLTHAHEDHIGAI----AY 78 Query: 99 FLKQKRPIDVYAAP---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 LK+ P+ VY P +K+ F A + P ++ I I D+ S Sbjct: 79 LLKE-FPVSVYGTPFTLSVVKNKLREFDILNMAELNVVMP--LDRIKIGAFDIEFIRVSH 135 Query: 156 GGV-IEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 V + + I G I G FR +++ CTD++ F E + L +A K Sbjct: 136 STVDVVGLAIRTPVGMIVHTGDFRINHCFDMSNCTDISRFAKCGEEGVLALLSDSTNAEK 195 Query: 211 NGLHSSHFSLSESLKKI 227 +G S + ESL KI Sbjct: 196 DGYTESDQIVKESLAKI 212 >gi|39933875|ref|NP_946151.1| beta-lactamase-like protein [Rhodopseudomonas palustris CGA009] gi|192289294|ref|YP_001989899.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|39647722|emb|CAE26242.1| Beta-lactamase-like [Rhodopseudomonas palustris CGA009] gi|192283043|gb|ACE99423.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 244 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 37/211 (17%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKRPI 106 G + ++D G + R +L +D +L TH HADH G+ L F+K+KRP+ Sbjct: 26 GQSVNFLIDCGATSLPALRRYGILREDLDLILITHFHADHFGGLPFMMLDAQFMKRKRPL 85 Query: 107 DVYAAP--------DCMKHLFE-------SFRYCFKALDDRTYPPIVNPI-VIENNDVPI 150 V A P M+ +FE +F AL+ P + + P+ Sbjct: 86 -VIAGPLGIDIRLTRLMEAMFEYSSATKPNFDLQVLALE----PAVTRQFGAVTVTPFPV 140 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 +GG A I + GRI +AY D + + + + D I +A Sbjct: 141 VHGDSGGPFFAYRI-EAEGRI---------LAYSGDTQ-WTDQLVAAAHDADLFICEAYT 189 Query: 211 -NGLHSSHFSLSESLKKIELINPKNAILTHM 240 +H SL + INPK ILTHM Sbjct: 190 YERTVKNHISLKALETHLPEINPKRVILTHM 220 >gi|295399067|ref|ZP_06809049.1| ribonuclease Z [Geobacillus thermoglucosidasius C56-YS93] gi|294978533|gb|EFG54129.1| ribonuclease Z [Geobacillus thermoglucosidasius C56-YS93] Length = 348 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DHI Sbjct: 14 PAKERNVSSVALQLLEERGA--TWLFDCGEATQHQILHTSIRPRRIEKIFITHLHGDHIF 71 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ VY P ++ E+ Sbjct: 72 GLPGLLGSRSFQGGETPLTVY-GPKGIQTFIET 103 >gi|218247065|ref|YP_002372436.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801] gi|257060134|ref|YP_003138022.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] gi|218167543|gb|ACK66280.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801] gi|256590300|gb|ACV01187.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] Length = 285 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 108/291 (37%), Gaps = 43/291 (14%) Query: 14 ASLGVPRITGDWGACDPTN-PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 ASLG WG P R S V + +I D G ++VL E Sbjct: 2 ASLGDRFYIKFWGVRGSIPCPGTETVRYGGNTSCVEMQVGKERLIFDGGTG--LRVLGES 59 Query: 73 VLSIDAV----LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +LS V +TH H DHI G F+ +Y P + + Sbjct: 60 MLSESPVTAHLFFTHSHWDHIQGFPFFSPAFVPNNT-FYIYGLPAPNGATIQQ-----RL 113 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS----SLGFR--FG--N 180 D +P P+ I D+ AG ++ + + GR++ +LG+R FG + Sbjct: 114 HDQMLHPNFPVPLQIMQGDLQFYNLEAGEIVNIGEVTVETGRLNHPGEALGYRVSFGGRS 173 Query: 181 VAYCTDVNAFP---AESLEKL-QNLDFLIIDAL----------KNGLHSSHFSLSESLKK 226 Y TD FP E++ KL + D LIIDA + + H + E +K Sbjct: 174 AVYVTDTEHFPDRLDENVLKLARQADVLIIDATYTDEEYYNPESSKVGWGHSTWQEGVKI 233 Query: 227 IELINPKNAILTH---MHVDLDYDMVLKSTPSRVVP----AFDGMQFSSPI 270 + + K +L H H D D + K V P A +G+ PI Sbjct: 234 AQAADVKQLVLFHHDPSHNDTYLDQI-KQEAIAVFPNTLLAREGLMIKVPI 283 >gi|302386696|ref|YP_003822518.1| hypothetical protein Closa_2322 [Clostridium saccharolyticum WM1] gi|302197324|gb|ADL04895.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 278 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 21/139 (15%) Query: 10 LGCGASLGVPRITGDWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG GA+ G+P + C K+ RTR+S + N +++D PD Y Sbjct: 6 LGTGAAEGIPAVFCQCETCRKAAKQKGKDIRTRASTLV--------NGKLLLDISPDLYF 57 Query: 67 QVL--REQVLSIDAVLYTHPHADHIHGIDGLRGY-----FLKQKRPIDVYAAPDCMKHLF 119 L + + AV TH H+DH + R + +RP+ VY + Sbjct: 58 HKLCYDLDLWKLKAVCVTHSHSDHFDSQELTRRSSANYCHIHSERPLTVYGNSKVCRMGR 117 Query: 120 ESFRYCFKALDDRTYPPIV 138 ESF+ F +D P +V Sbjct: 118 ESFKEEFGKEED---PSVV 133 >gi|33359267|ref|NP_142252.2| hypothetical protein PH0260 [Pyrococcus horikoshii OT3] Length = 262 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 15/88 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--F 64 ILG G+ G P+ C NP RRTR S+ I E G +++D GPD + Sbjct: 10 ILGSGSYSGTPKPLCTCENCTRARINPAFRRTRFSVYI----EGG----ILIDPGPDLHY 61 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGI 92 +++ L ++V + +L TH H DHI G+ Sbjct: 62 HLEKLNKEV---ETILITHAHFDHIFGL 86 >gi|157413911|ref|YP_001484777.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9215] gi|166991496|sp|A8G6G0|RNZ_PROM2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157388486|gb|ABV51191.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. MIT 9215] Length = 312 Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 36/157 (22%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 G S GVP +T + + +LK+S+ SE + D G Q+++ Sbjct: 7 GTSSGVPSLTRNVSSL------------ALKLSQSSE-----VWLFDCGEGTQHQIMKSN 49 Query: 73 VLS--IDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 + S I + TH H DHI+G+ GL + I++Y + ++ + + F Sbjct: 50 IKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSKGIEIYGPSELRSYINSALKSSFCK 109 Query: 129 LDDRTYP---------PIVNPIVIENNDVPI---CMK 153 L +YP N I+ ENN + + C+K Sbjct: 110 L---SYPLHFVEVENYASKNKILFENNKIKVNCACLK 143 >gi|222099215|ref|YP_002533783.1| Beta-lactamase domain protein [Thermotoga neapolitana DSM 4359] gi|221571605|gb|ACM22417.1| Beta-lactamase domain protein [Thermotoga neapolitana DSM 4359] Length = 254 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 17/202 (8%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRP 105 + NT ++VD + + ++L+ ++ L +DA+ TH H DH++G+ L +KRP Sbjct: 25 KSGNTFILVDCPGNVWGRLLKMRLNPLELDAIFITHGHVDHVYGLPSLLEMMRLNGRKRP 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y D + L E F+ + +P + + + +IE P+ Sbjct: 85 LSIYVGEDFLV-LVEKLLDLFEIAN---HPDSFKIDLFGLDYKSSLFRVKDLMIETFPV- 139 Query: 166 QQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHF 218 R +L FR NV+ Y +D A+ E N D LI +A L + H Sbjct: 140 NHTVRNLALKFRNDNVSIVYSSD-TAYHEPLAEFASNCDVLIHEATMSTKLGDAFREGHS 198 Query: 219 SLSESLKKIELINPKNAILTHM 240 + S++ + E K L H+ Sbjct: 199 TPSDAARIAEKARVKQLFLVHV 220 >gi|218232078|ref|YP_002368944.1| ribonuclease Z [Bacillus cereus B4264] gi|254808610|sp|B7HB12|RNZ_BACC4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218160035|gb|ACK60027.1| ribonuclease Z [Bacillus cereus B4264] Length = 307 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLKVY-GPKGIKQFIE 101 >gi|332160109|ref|YP_004296686.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607330|emb|CBY28828.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664339|gb|ADZ40983.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 255 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 70/280 (25%), Positives = 100/280 (35%), Gaps = 48/280 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP C P RR S + E T ++D G Sbjct: 3 LTLLGTGCAQQVPVFGCQCVICTKARLQPTLRRQPCSAMLHYQGE-----TTLIDAGLPA 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD---CMKHLFES 121 Q+ I L TH H DH+ G+ LR I VY PD C Sbjct: 58 LDQLFAGG--EIQRFLLTHYHMDHVQGLFPLR---WGCGNAIPVYGPPDPDGCDDLYKHP 112 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 F+ PP+ I+ D + P+ H +I+ G+ + Sbjct: 113 GILAFQ-------PPLSAFHPIQFGD-----------LRVTPVPLNHSKIT-FGYLLQSP 153 Query: 181 ---VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSS--------HFSLSESLKKI 227 +AY TD PA+S L +N+D LI D H S H ++ +L Sbjct: 154 NRTIAYLTDTIGLPADSALFLASKNIDLLIQDCSHPPHHFSPHRPPPRNHNDVTMALAIS 213 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 EL+ P +LTH+ LD + + P + A D S Sbjct: 214 ELLKPAATLLTHISHQLDTWALDNTLPDGITIAQDNQIIS 253 >gi|237736738|ref|ZP_04567219.1| predicted protein [Fusobacterium mortiferum ATCC 9817] gi|229420600|gb|EEO35647.1| predicted protein [Fusobacterium mortiferum ATCC 9817] Length = 225 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 23/219 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRG- 97 LK + +T + D G + ++L+ +++ V TH H DH+ + L Sbjct: 15 QLKNTSAYYETEDTLYLFDCGETVFDEILKRKLIEKKYIKVFITHTHCDHVGSLGSLLSY 74 Query: 98 -YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y+++ K+ ++V D +K E + D Y + NN++ K Sbjct: 75 CYYVQDKKIVEVIHPTDYLKKFLE-----IVGIGDELYNY---SYSLNNNEI----KVEA 122 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIID-ALKNGL 213 V+ + + +G + S+ + V Y D P E LEK + +D L +D + K Sbjct: 123 VVVPHVSDMISYGYLISI--KGKKVFYSGDCARVPEEILEKYLSGEIDELYLDISSKKTS 180 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H++H ++ + + I + KN MH+D DY V++ Sbjct: 181 HAAHGNIVDLEEMIPIDKRKNVYC--MHLDKDYREVIRE 217 >gi|188581024|ref|YP_001924469.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium populi BJ001] gi|226704955|sp|B1ZIB4|PQQB_METPB RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|179344522|gb|ACB79934.1| coenzyme PQQ biosynthesis protein B [Methylobacterium populi BJ001] Length = 299 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 39/229 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDTG 61 H ILG A GVP+ C +P+ + RT+SS+ +S ER ++++ Sbjct: 2 HVVILGSAAGGGVPQWNCRCSICSLAWAGDPRVKARTQSSIAVSPDGER----WLLLNAS 57 Query: 62 PDFYMQVL-------REQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA P Sbjct: 58 PDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYATP 112 Query: 113 DCMKHLFESFRYCFKALD---------DRTYPPIVNPIVI---ENNDVPICMKSAGGVIE 160 + + ++ + A D D T+ P+ V VP+ ++ A I Sbjct: 113 GILASVSDNRVFDVMAADVVKRQTIALDETFEPVPGLSVTLFSVPGKVPLWLEDASMEIG 172 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLE-KLQNLDFLIIDA 208 A I + G R + C V E L+ ++ +D L+ D Sbjct: 173 AETETTVGTMIEAGGKRLAYIPGCARVT----EDLKARVAGVDALLFDG 217 >gi|332178399|gb|AEE14088.1| hypothetical protein Thena_0447 [Thermodesulfobium narugense DSM 14796] Length = 261 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 55/239 (23%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T ++D G + ++ L +V IDAV TH HADH+ G++ F + Sbjct: 21 RMGGYTFLIDIGVNCSYLKRSLESLHLRVEDIDAVFITHEHADHVRGLE----VFARNYC 76 Query: 105 PIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I V+ C + + R CF+ L D ++ ++V + S Sbjct: 77 NIPVFIREKCFNEVLKRVESRNCFQILTDE----------VKFDNVKVSFFST------- 119 Query: 163 PILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLI------IDALKNG 212 H I +G+ F +C TD+ ++ + D L+ I+ LKNG Sbjct: 120 ----PHDAIDPIGYEFSCRDFCFSYITDLGEVTSDVKCAIDKSDLLVLESNHDIEMLKNG 175 Query: 213 LH---------SSHFSLSESLKKIELINPK----NAILTHMHVDLDYDMVLKSTPSRVV 258 + SS+ LS + L+N K N +L H+ + +LK T ++ Sbjct: 176 SYPYYLKKRILSSNGHLSNKDAALALLNSKIKKRNIVLAHLSEKNNSLEILKKTYREIL 234 >gi|291550066|emb|CBL26328.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus torques L2-14] Length = 265 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N+ +++DTG + + L + +D +L TH H+DHI G+ G F +K I Sbjct: 21 NSHLLIDTGISKKRIEEGLNKLEIKGDELDGILITHEHSDHIKGL----GVF-SRKYEIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA P + + ES + +++PI D P + G ++ P Sbjct: 76 IYATPGTIAGIKESSSLG------KMPEGLLHPI---KTDHPFRL----GELDVHPFAIS 122 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R +VA TD+ + +++ L+NLD ++++A Sbjct: 123 HDANEPSGYRIEQGGKSVAVATDLGKYDDYTVKNLKNLDAILLEA 167 >gi|227494819|ref|ZP_03925135.1| beta-lactamase superfamily hydrolase [Actinomyces coleocanis DSM 15436] gi|226831271|gb|EEH63654.1| beta-lactamase superfamily hydrolase [Actinomyces coleocanis DSM 15436] Length = 265 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 32/226 (14%) Query: 56 VIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA 111 V+ D GP + Q+ R IDAV+++H HADH+ + L R + + Sbjct: 41 VVFDLGPGSFGQLWRYVDPRKIDAVIFSHLHADHMGDVISLHVHRRWHPQGNLGQVTLGG 100 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P +L + R A + Y P+++E+ + G ++ P H + Sbjct: 101 P---SNLLDRVRGIDGADESEDYAAEFAPLILEDG-----VSFNVGPLKITPYAAWH-TV 151 Query: 172 SSLGFRF-----GNVAYCTDVNAFPAES------LEKLQNLDFLIIDA---LKNGLHSSH 217 S GFR G+ A C + A+ ++ +E + ++ L+ +A + + H Sbjct: 152 ESYGFRVEGPSEGDAAKCVTI-AYTGDTDYCERMVEMAEGVELLLSEAGFTAADEVRGIH 210 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + + + + K+ +LTH+ D ++VL+ +R+ A+DG Sbjct: 211 LTGERAAQLAKTAQAKSMVLTHIQAWTDSEVVLRE--ARL--AWDG 252 >gi|206971168|ref|ZP_03232119.1| ribonuclease Z [Bacillus cereus AH1134] gi|229081399|ref|ZP_04213902.1| Ribonuclease Z [Bacillus cereus Rock4-2] gi|229180422|ref|ZP_04307765.1| Ribonuclease Z [Bacillus cereus 172560W] gi|229192354|ref|ZP_04319318.1| Ribonuclease Z [Bacillus cereus ATCC 10876] gi|206733940|gb|EDZ51111.1| ribonuclease Z [Bacillus cereus AH1134] gi|228591134|gb|EEK48989.1| Ribonuclease Z [Bacillus cereus ATCC 10876] gi|228603169|gb|EEK60647.1| Ribonuclease Z [Bacillus cereus 172560W] gi|228702021|gb|EEL54504.1| Ribonuclease Z [Bacillus cereus Rock4-2] Length = 307 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|197121211|ref|YP_002133162.1| beta-lactamase [Anaeromyxobacter sp. K] gi|196171060|gb|ACG72033.1| beta-lactamase domain protein [Anaeromyxobacter sp. K] Length = 288 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 38/211 (18%) Query: 53 NTTVIVDTGPDFYMQVL--REQV--LSIDAVLYTHPHADHIHGIDGL-----RGYFLKQK 103 T+ VD GP ++ L R ++ +DA++ TH H DH + RG F Sbjct: 37 GATIWVDPGPGALVRALSSRPKIDPAKVDALVITHRHLDHAGDATAVVEAMTRGGF---- 92 Query: 104 RPIDVYAAP-DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P AP D ++ FRY + +P V + + A GV Sbjct: 93 SPRGTLLAPRDALETEPVVFRYA------QAFPARVGQLAPG-----VRHALAPGVTLET 141 Query: 163 PILQQHG------RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNG-L 213 P+ HG +S+ G R G+V ++A P E +D L+++ L+ G Sbjct: 142 PVAHDHGVETYGYLLSAPGLRAGHVVDTFWMDALP----EAYAGVDLLLVNTTRLRGGDR 197 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDL 244 H ++ + + + P+ A+LTH+ + L Sbjct: 198 RYLHLGADDAERLVAAVRPRLAVLTHLGMQL 228 >gi|228909974|ref|ZP_04073795.1| Ribonuclease Z [Bacillus thuringiensis IBL 200] gi|228849809|gb|EEM94642.1| Ribonuclease Z [Bacillus thuringiensis IBL 200] Length = 307 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|229047834|ref|ZP_04193414.1| Ribonuclease Z [Bacillus cereus AH676] gi|228723626|gb|EEL74991.1| Ribonuclease Z [Bacillus cereus AH676] Length = 307 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|237728176|ref|ZP_04558657.1| carbon-phosphorus lyase complex accessory protein [Citrobacter sp. 30_2] gi|226910187|gb|EEH96105.1| carbon-phosphorus lyase complex accessory protein [Citrobacter sp. 30_2] Length = 252 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 35/268 (13%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+ G G + VP D AC + + + R R + R + N ++D G M Sbjct: 6 TLTGTGGAQLVPTFGCDCAACQRAHLQAQYRRRPCSGVVRFN----NAVTLLDAGIPHLM 61 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 S L TH H DH+ G+ LR I VY PD Sbjct: 62 D--DWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGATIPVYGPPD------------E 104 Query: 127 KALDDR-TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS---SLGFRFGNVA 182 + DD +P I++ + P + G ++ P+ H +++ L VA Sbjct: 105 QGCDDLFKHPGILD---FSHTVAPFVVFDLQG-LQVTPLPLNHSKLTFGYLLETAHSRVA 160 Query: 183 YCTDVNAFPAESLEKLQN--LDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 + +D P ++L+ L N +IID A + +H L+ + ++I+ IL Sbjct: 161 WLSDTAGLPDKTLKFLHNNQPQVIIIDCSHAPRAEPPRNHCDLNTVIALNDVIHCPRVIL 220 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 TH+ D M+ P +DGM+ Sbjct: 221 THISHQFDLWMMEHPLPVGFEAGYDGME 248 >gi|332158416|ref|YP_004423695.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] gi|331033879|gb|AEC51691.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] Length = 257 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G+ G P+ + C NP RRTR S+ I E G +++D PD + Sbjct: 5 ILGSGSYSGTPKPLCNCENCSRARKNPTFRRTRFSVYI----EGG----ILIDPSPDLHY 56 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + R + VL TH H DHI GI L+ + Sbjct: 57 HLERIDS-EVKLVLITHAHFDHIFGIPDLQVF 87 >gi|329570096|gb|EGG51841.1| hypothetical protein HMPREF9520_03097 [Enterococcus faecalis TX1467] Length = 276 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 42/283 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R + +I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLC-----KYAREKKGREIRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGDDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I +P QHG S F F G Sbjct: 121 EGRLDDTRLHYQVIQPYK--------CFTIANYTIYPLP--AQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ + N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILTHMHVD----LDY-DMVLKSTPSRVVPAFDGMQ 265 + I H L Y +M S ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLE 273 >gi|229174819|ref|ZP_04302340.1| Ribonuclease Z [Bacillus cereus MM3] gi|228608651|gb|EEK65952.1| Ribonuclease Z [Bacillus cereus MM3] Length = 307 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|228954426|ref|ZP_04116452.1| Ribonuclease Z [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805358|gb|EEM51951.1| Ribonuclease Z [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|156937959|ref|YP_001435755.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566943|gb|ABU82348.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 240 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 45/243 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 HF LG G + G W A K RR S + +D G Sbjct: 4 HF--LGTGPASG-------WPAYGKETEKRRRP------STYAFECGEAKFFIDVGSWEA 48 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-- 123 +++ ++D +L +H H DH G++ F + + ++ + +H + FR Sbjct: 49 ALEGAKRLGNVDFILISHAHVDHWGGLN-----FFRWGPEMPTFSIKETFEHPY--FREI 101 Query: 124 ----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + K L+ R + E V I I A L + G Sbjct: 102 KDAPFSLKLLEVRPFE------TFEIKGVKITPFPLNHSIPASGFLVECGS--------- 146 Query: 180 NVAYCTDVNAFPAESLEKLQ-NLDFLIID-ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 +AY D P ESLE L+ ++D+LI+D AL G +H + E+L+ + I K Sbjct: 147 KLAYALDTKWLPQESLELLKGSVDYLIVDAALPKGEEGAHNTYEEALRLGKEIGAKVVFA 206 Query: 238 THM 240 H+ Sbjct: 207 VHL 209 >gi|124806602|ref|XP_001350768.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] gi|23496896|gb|AAN36448.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] Length = 438 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 10/99 (10%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPA---ESLEKLQNLDFLIIDAL-K 210 I IP HG+ +G+ GN + Y +D + P E ++K+ ++D LIIDAL Sbjct: 313 IRFIPF--HHGKNYICIGYIIGNTNKLVYISDCSKLPNYILEYIKKMGSIDILIIDALFY 370 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 H SHFSL ES+ I PK M D+++++ Sbjct: 371 KRKHYSHFSLYESINIALQIKPKQVFFIGMSCDIEHNIT 409 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 18/79 (22%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ------VLSIDAVLYTHPHADHIHGIDGLRG------ 97 + +++ V++D G F +LR + +++ +VL +H H D ++GID LR Sbjct: 111 KSNDSYVLIDVGKTFRDSILRNKDKINFYKINLHSVLISHSHTDALNGIDDLRDLQEFNK 170 Query: 98 ------YFLKQKRPIDVYA 110 Y+ K+ DVY Sbjct: 171 VQYDDVYYYTPKKIFDVYV 189 >gi|49478558|ref|YP_038206.1| ribonuclease Z [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118479338|ref|YP_896489.1| ribonuclease Z [Bacillus thuringiensis str. Al Hakam] gi|196038730|ref|ZP_03106038.1| ribonuclease Z [Bacillus cereus NVH0597-99] gi|196047233|ref|ZP_03114449.1| ribonuclease Z [Bacillus cereus 03BB108] gi|225866126|ref|YP_002751504.1| ribonuclease Z [Bacillus cereus 03BB102] gi|228916781|ref|ZP_04080346.1| Ribonuclease Z [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229093204|ref|ZP_04224322.1| Ribonuclease Z [Bacillus cereus Rock3-42] gi|229186388|ref|ZP_04313552.1| Ribonuclease Z [Bacillus cereus BGSC 6E1] gi|301055637|ref|YP_003793848.1| ribonuclease Z [Bacillus anthracis CI] gi|56749430|sp|Q6HE20|RNZ_BACHK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991094|sp|A0RID9|RNZ_BACAH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808609|sp|C1ER14|RNZ_BACC3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|49330114|gb|AAT60760.1| possible metallo-beta-lactamase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118418563|gb|ABK86982.1| RNAse Z [Bacillus thuringiensis str. Al Hakam] gi|196021982|gb|EDX60673.1| ribonuclease Z [Bacillus cereus 03BB108] gi|196030453|gb|EDX69052.1| ribonuclease Z [Bacillus cereus NVH0597-99] gi|225787461|gb|ACO27678.1| ribonuclease Z [Bacillus cereus 03BB102] gi|228597015|gb|EEK54671.1| Ribonuclease Z [Bacillus cereus BGSC 6E1] gi|228690178|gb|EEL43972.1| Ribonuclease Z [Bacillus cereus Rock3-42] gi|228842968|gb|EEM88051.1| Ribonuclease Z [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300377806|gb|ADK06710.1| ribonuclease Z [Bacillus cereus biovar anthracis str. CI] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|30264217|ref|NP_846594.1| ribonuclease Z [Bacillus anthracis str. Ames] gi|47529660|ref|YP_021009.1| ribonuclease Z [Bacillus anthracis str. 'Ames Ancestor'] gi|49187047|ref|YP_030299.1| ribonuclease Z [Bacillus anthracis str. Sterne] gi|65321533|ref|ZP_00394492.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Bacillus anthracis str. A2012] gi|165871127|ref|ZP_02215777.1| ribonuclease Z [Bacillus anthracis str. A0488] gi|167633571|ref|ZP_02391895.1| ribonuclease Z [Bacillus anthracis str. A0442] gi|167639504|ref|ZP_02397775.1| ribonuclease Z [Bacillus anthracis str. A0193] gi|170687270|ref|ZP_02878488.1| ribonuclease Z [Bacillus anthracis str. A0465] gi|170705861|ref|ZP_02896324.1| ribonuclease Z [Bacillus anthracis str. A0389] gi|177652639|ref|ZP_02935055.1| ribonuclease Z [Bacillus anthracis str. A0174] gi|190566047|ref|ZP_03018966.1| ribonuclease Z [Bacillus anthracis Tsiankovskii-I] gi|196034932|ref|ZP_03102339.1| ribonuclease Z [Bacillus cereus W] gi|218905280|ref|YP_002453114.1| ribonuclease Z [Bacillus cereus AH820] gi|227816920|ref|YP_002816929.1| ribonuclease Z [Bacillus anthracis str. CDC 684] gi|228929191|ref|ZP_04092218.1| Ribonuclease Z [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935464|ref|ZP_04098282.1| Ribonuclease Z [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947861|ref|ZP_04110148.1| Ribonuclease Z [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123664|ref|ZP_04252859.1| Ribonuclease Z [Bacillus cereus 95/8201] gi|229600192|ref|YP_002868439.1| ribonuclease Z [Bacillus anthracis str. A0248] gi|254683907|ref|ZP_05147767.1| ribonuclease Z [Bacillus anthracis str. CNEVA-9066] gi|254721742|ref|ZP_05183531.1| ribonuclease Z [Bacillus anthracis str. A1055] gi|254736255|ref|ZP_05193961.1| ribonuclease Z [Bacillus anthracis str. Western North America USA6153] gi|254744144|ref|ZP_05201827.1| ribonuclease Z [Bacillus anthracis str. Kruger B] gi|254754073|ref|ZP_05206108.1| ribonuclease Z [Bacillus anthracis str. Vollum] gi|254758234|ref|ZP_05210261.1| ribonuclease Z [Bacillus anthracis str. Australia 94] gi|41017543|sp|Q81M88|RNZ_BACAN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808605|sp|C3P7S4|RNZ_BACAA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808606|sp|C3LJR8|RNZ_BACAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808607|sp|B7JLZ5|RNZ_BACC0 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|30258862|gb|AAP28080.1| ribonuclease Z [Bacillus anthracis str. Ames] gi|47504808|gb|AAT33484.1| ribonuclease Z [Bacillus anthracis str. 'Ames Ancestor'] gi|49180974|gb|AAT56350.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164713046|gb|EDR18573.1| ribonuclease Z [Bacillus anthracis str. A0488] gi|167512563|gb|EDR87938.1| ribonuclease Z [Bacillus anthracis str. A0193] gi|167530977|gb|EDR93664.1| ribonuclease Z [Bacillus anthracis str. A0442] gi|170129401|gb|EDS98265.1| ribonuclease Z [Bacillus anthracis str. A0389] gi|170668887|gb|EDT19632.1| ribonuclease Z [Bacillus anthracis str. A0465] gi|172081974|gb|EDT67042.1| ribonuclease Z [Bacillus anthracis str. A0174] gi|190562966|gb|EDV16932.1| ribonuclease Z [Bacillus anthracis Tsiankovskii-I] gi|195992471|gb|EDX56432.1| ribonuclease Z [Bacillus cereus W] gi|218539378|gb|ACK91776.1| ribonuclease Z [Bacillus cereus AH820] gi|227005393|gb|ACP15136.1| ribonuclease Z [Bacillus anthracis str. CDC 684] gi|228659799|gb|EEL15444.1| Ribonuclease Z [Bacillus cereus 95/8201] gi|228811848|gb|EEM58182.1| Ribonuclease Z [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824216|gb|EEM70030.1| Ribonuclease Z [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830481|gb|EEM76091.1| Ribonuclease Z [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229264600|gb|ACQ46237.1| ribonuclease Z [Bacillus anthracis str. A0248] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|30022222|ref|NP_833853.1| ribonuclease Z [Bacillus cereus ATCC 14579] gi|228922891|ref|ZP_04086189.1| Ribonuclease Z [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228960410|ref|ZP_04122062.1| Ribonuclease Z [Bacillus thuringiensis serovar pakistani str. T13001] gi|229111615|ref|ZP_04241166.1| Ribonuclease Z [Bacillus cereus Rock1-15] gi|229129421|ref|ZP_04258392.1| Ribonuclease Z [Bacillus cereus BDRD-Cer4] gi|229146717|ref|ZP_04275083.1| Ribonuclease Z [Bacillus cereus BDRD-ST24] gi|229152342|ref|ZP_04280535.1| Ribonuclease Z [Bacillus cereus m1550] gi|296504633|ref|YP_003666333.1| ribonuclease Z [Bacillus thuringiensis BMB171] gi|41017542|sp|Q818V3|RNZ_BACCR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29897779|gb|AAP11054.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|228631304|gb|EEK87940.1| Ribonuclease Z [Bacillus cereus m1550] gi|228636737|gb|EEK93201.1| Ribonuclease Z [Bacillus cereus BDRD-ST24] gi|228654026|gb|EEL09893.1| Ribonuclease Z [Bacillus cereus BDRD-Cer4] gi|228671997|gb|EEL27290.1| Ribonuclease Z [Bacillus cereus Rock1-15] gi|228799271|gb|EEM46236.1| Ribonuclease Z [Bacillus thuringiensis serovar pakistani str. T13001] gi|228836946|gb|EEM82289.1| Ribonuclease Z [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325685|gb|ADH08613.1| ribonuclease Z [Bacillus thuringiensis BMB171] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|218899304|ref|YP_002447715.1| ribonuclease Z [Bacillus cereus G9842] gi|228902652|ref|ZP_04066803.1| Ribonuclease Z [Bacillus thuringiensis IBL 4222] gi|228941303|ref|ZP_04103856.1| Ribonuclease Z [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967182|ref|ZP_04128218.1| Ribonuclease Z [Bacillus thuringiensis serovar sotto str. T04001] gi|228974235|ref|ZP_04134805.1| Ribonuclease Z [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980826|ref|ZP_04141131.1| Ribonuclease Z [Bacillus thuringiensis Bt407] gi|254808608|sp|B7IWQ5|RNZ_BACC2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218543591|gb|ACK95985.1| ribonuclease Z [Bacillus cereus G9842] gi|228778995|gb|EEM27257.1| Ribonuclease Z [Bacillus thuringiensis Bt407] gi|228785575|gb|EEM33584.1| Ribonuclease Z [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792551|gb|EEM40117.1| Ribonuclease Z [Bacillus thuringiensis serovar sotto str. T04001] gi|228818462|gb|EEM64534.1| Ribonuclease Z [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228857093|gb|EEN01602.1| Ribonuclease Z [Bacillus thuringiensis IBL 4222] gi|326941921|gb|AEA17817.1| ribonuclease Z [Bacillus thuringiensis serovar chinensis CT-43] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|312110329|ref|YP_003988645.1| ribonuclease Z [Geobacillus sp. Y4.1MC1] gi|311215430|gb|ADP74034.1| ribonuclease Z [Geobacillus sp. Y4.1MC1] Length = 309 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DHI Sbjct: 14 PAKERNVSSVALQLLEERGA--TWLFDCGEATQHQILHTSIRPRRIEKIFITHLHGDHIF 71 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ VY P ++ E+ Sbjct: 72 GLPGLLGSRSFQGGETPLTVY-GPKGIQAFIET 103 >gi|42783256|ref|NP_980503.1| ribonuclease Z [Bacillus cereus ATCC 10987] gi|206976331|ref|ZP_03237239.1| ribonuclease Z [Bacillus cereus H3081.97] gi|217961634|ref|YP_002340204.1| ribonuclease Z [Bacillus cereus AH187] gi|222097590|ref|YP_002531647.1| ribonuclease z [Bacillus cereus Q1] gi|229140877|ref|ZP_04269422.1| Ribonuclease Z [Bacillus cereus BDRD-ST26] gi|56749438|sp|Q731F6|RNZ_BACC1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808611|sp|B7HNQ7|RNZ_BACC7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808612|sp|B9IXD7|RNZ_BACCQ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|42739184|gb|AAS43111.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206745527|gb|EDZ56926.1| ribonuclease Z [Bacillus cereus H3081.97] gi|217065116|gb|ACJ79366.1| ribonuclease Z [Bacillus cereus AH187] gi|221241648|gb|ACM14358.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|228642667|gb|EEK98953.1| Ribonuclease Z [Bacillus cereus BDRD-ST26] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|255026506|ref|ZP_05298492.1| hypothetical protein LmonocytFSL_09523 [Listeria monocytogenes FSL J2-003] Length = 105 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|18310639|ref|NP_562573.1| late competence protein [Clostridium perfringens str. 13] gi|18145320|dbj|BAB81363.1| probable late competence protein [Clostridium perfringens str. 13] Length = 284 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DVFKGMVTALKEK--- 131 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 I + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 132 DININTLSKSKSLPIDLGENTKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 QAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|229071647|ref|ZP_04204865.1| Ribonuclease Z [Bacillus cereus F65185] gi|228711583|gb|EEL63540.1| Ribonuclease Z [Bacillus cereus F65185] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|228987335|ref|ZP_04147455.1| Ribonuclease Z [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157725|ref|ZP_04285800.1| Ribonuclease Z [Bacillus cereus ATCC 4342] gi|228625682|gb|EEK82434.1| Ribonuclease Z [Bacillus cereus ATCC 4342] gi|228772307|gb|EEM20753.1| Ribonuclease Z [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 307 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|219852567|ref|YP_002466999.1| ribonuclease Z [Methanosphaerula palustris E1-9c] gi|219546826|gb|ACL17276.1| ribonuclease Z [Methanosphaerula palustris E1-9c] Length = 313 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPI 106 RG++T ++ D G Q++R + ++DA+ TH HADH G+ GL F+ + P+ Sbjct: 31 RGADT-LLFDCGEGAQQQMMRARTGFTVDAIFITHWHADHFLGVFGLVQTLSFMGRAEPL 89 Query: 107 DVYAAPDCMKHLFESFRYCFK 127 +Y P+ + E R+ K Sbjct: 90 TIY-GPEWVHEFAEDVRHMGK 109 >gi|229031788|ref|ZP_04187777.1| Ribonuclease Z [Bacillus cereus AH1271] gi|228729534|gb|EEL80522.1| Ribonuclease Z [Bacillus cereus AH1271] Length = 307 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|324328047|gb|ADY23307.1| ribonuclease Z [Bacillus thuringiensis serovar finitimus YBT-020] Length = 307 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|52141354|ref|YP_085475.1| ribonuclease Z [Bacillus cereus E33L] gi|76363372|sp|Q635E2|RNZ_BACCZ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|51974823|gb|AAU16373.1| possible metallo-beta-lactamase [Bacillus cereus E33L] Length = 307 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|229198271|ref|ZP_04324978.1| Ribonuclease Z [Bacillus cereus m1293] gi|228585150|gb|EEK43261.1| Ribonuclease Z [Bacillus cereus m1293] Length = 307 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|73669295|ref|YP_305310.1| ribonuclease Z [Methanosarcina barkeri str. Fusaro] gi|72396457|gb|AAZ70730.1| RNAse Z [Methanosarcina barkeri str. Fusaro] Length = 305 Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 36/175 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G SL P R S++ ++R E ++ D G Sbjct: 3 RITFLGTGGSL----------------PTRNRNPSAVMVNREGE-----LILFDCGEGTQ 41 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFES 121 Q++R + ++++ ++ +H HADH GI GL F+ +K P+ +Y P+ + Sbjct: 42 QQMMRAKTGMMNLSSIFVSHFHADHFLGIPGLIQTMSFMGRKEPLLIY-GPEGTRE---- 96 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F FKAL V I ++ DV ++ VI A L+ ISSLG+ Sbjct: 97 FTELFKALGYFNLNYEVQGIQLKPGDV---VERKEYVIRA---LKTEHSISSLGY 145 >gi|289548930|ref|YP_003473918.1| beta-lactamase [Thermocrinis albus DSM 14484] gi|289182547|gb|ADC89791.1| beta-lactamase domain protein [Thermocrinis albus DSM 14484] Length = 253 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 12/125 (9%) Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA-- 208 +K AG I A+ + HG + + F N + + L+ +N+D II+ Sbjct: 127 IKHAGISIRAVMKHRHHG-VETYALLFDNRVLYVSCALYEDKMLDMYPKNVDVTIINTTL 185 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM--------VLKSTPSRVVPA 260 K + H S+ ++ K I + PK A+LTH ++ +M V +ST R V A Sbjct: 186 YKKSKYVEHLSVEDAKKIIGSVRPKLAVLTHFGYEILKNMDPQAIASEVEESTGIRTVSA 245 Query: 261 FDGMQ 265 +DGM+ Sbjct: 246 YDGME 250 >gi|47568203|ref|ZP_00238907.1| metallo-beta-lactamase, AtsA/ElaC family [Bacillus cereus G9241] gi|47555193|gb|EAL13540.1| metallo-beta-lactamase, AtsA/ElaC family [Bacillus cereus G9241] Length = 307 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|229061814|ref|ZP_04199147.1| Ribonuclease Z [Bacillus cereus AH603] gi|228717560|gb|EEL69224.1| Ribonuclease Z [Bacillus cereus AH603] Length = 307 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|188577402|ref|YP_001914331.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521854|gb|ACD59799.1| coenzyme PQQ biosynthesis protein B [Xanthomonas oryzae pv. oryzae PXO99A] Length = 294 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 18/104 (17%) Query: 27 ACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL---------SID 77 A + RRT++S+ +S ER + +V+ PDF Q+L L I+ Sbjct: 22 AWQQADGAQRRTQASIAVSADGERWA----LVNASPDFRQQILATPALWPQQGLRHSPIE 77 Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 AVL T DHI G+ +R + +P ++A+P + L ++ Sbjct: 78 AVLLTSGEIDHIAGLLSMR-----ESQPFALHASPRVLDLLAQN 116 >gi|110644450|ref|YP_672180.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 536] gi|191171947|ref|ZP_03033492.1| phosphonate utilization protein [Escherichia coli F11] gi|300994978|ref|ZP_07181002.1| phosphonate metabolism protein PhnP [Escherichia coli MS 200-1] gi|331681028|ref|ZP_08381665.1| phosphonate metabolism protein PhnP [Escherichia coli H299] gi|110346042|gb|ABG72279.1| PhnP protein [Escherichia coli 536] gi|190907712|gb|EDV67306.1| phosphonate utilization protein [Escherichia coli F11] gi|300304875|gb|EFJ59395.1| phosphonate metabolism protein PhnP [Escherichia coli MS 200-1] gi|331081249|gb|EGI52410.1| phosphonate metabolism protein PhnP [Escherichia coli H299] Length = 252 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 78/199 (39%), Gaps = 26/199 (13%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 S L TH H DH+ G+ LR Q I VY PD + FK + Sbjct: 68 SFQQFLLTHYHMDHVQGLFPLRWGVGDQ---IPVYGPPD-----EQGCDDLFKHSGLLDF 119 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNAFP 191 V P V M G ++ P+ H +++ L VA+ +D P Sbjct: 120 SHTVEPFV---------MFDLQG-LQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLP 169 Query: 192 AESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++L+ L+N ++ID + +H L+ L ++I ILTH+ D Sbjct: 170 EKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDA 229 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 ++ + PS FDGM+ Sbjct: 230 WLMENALPSGFEAGFDGME 248 >gi|332157833|ref|YP_004423112.1| atp-binding protein phnp (phnp) [Pyrococcus sp. NA2] gi|331033296|gb|AEC51108.1| atp-binding protein phnp (phnp) [Pyrococcus sp. NA2] Length = 249 Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 49/274 (17%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +G G S G+P + +C+ R ++ VS+ G+ ++ D G D + Sbjct: 6 IGTGGSEGIPVHLCNCSSCNEARKFKFAQRKPSTLAIVSKSGN--VLLFDVGTD-----I 58 Query: 70 REQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 RE + + +DA+ TH H DHI+G+ LR R +YA L Sbjct: 59 REFLNVPLDAIFLTHWHHDHIYGLYKLRWI----ARETKLYAPKGHADALI--------- 105 Query: 129 LDDRTYPPIVNPIVIENN------DVPICMKSAGGVIEAIP-ILQQHGRISSLGFRFGNV 181 L D P + P +I+ D+ + +E I++++G+ V Sbjct: 106 LKD---PKNLRPRIIKAEESFYFGDLKVKSVKLNHQVETFGYIVEEYGK---------RV 153 Query: 182 AYCTDVNAFPAES---LEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKNAIL 237 A D P + LE+L L +I+DA G + + + +I + + +L Sbjct: 154 AILYDTKGLPRRTEALLEELTPLRLVIVDATYPPGYDDPYHNNVDEGAEIGVKIAERTVL 213 Query: 238 THM-HVDLDYDMVLKSTPS----RVVPAFDGMQF 266 +H+ H +L + +++ T RV+ A+DGM F Sbjct: 214 SHISHKNLPFLELVRYTKEKWKDRVLVAYDGMVF 247 >gi|170079393|ref|YP_001736031.1| ribonuclease Z [Synechococcus sp. PCC 7002] gi|254808678|sp|B1XN66|RNZ_SYNP2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|169887062|gb|ACB00776.1| tRNA 3' endonuclease RNase Z [Synechococcus sp. PCC 7002] Length = 317 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 20/150 (13%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIH 90 P R S + + R+ +R + D G Q+LR + S I + TH H DHI Sbjct: 13 PTRARNVSGVAL-RLPQRAE--AWLFDCGEGTQHQLLRSDLRSSQISRIFITHMHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP-IVIENND 147 G+ GL P+++Y P ++L +Y + + DR +V P +V E+ + Sbjct: 70 GLMGLIASMGLAGTGHPLEIYGPPGLEEYLRACEKYSYMRIGDRLRVHLVKPGLVFEDKE 129 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + +P+ +H R+++ G+R Sbjct: 130 FQVT---------CLPL--KH-RVTAFGYR 147 >gi|126661173|ref|ZP_01732250.1| ribonuclease Z [Cyanothece sp. CCY0110] gi|126617546|gb|EAZ88338.1| ribonuclease Z [Cyanothece sp. CCY0110] Length = 318 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 11/136 (8%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR ++ I + TH H DHI+ Sbjct: 13 PTRSRNVSSVAL-RLPQRAE--VWLFDCGEGTQHQLLRSDVKISQITRIFVTHMHGDHIY 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENND 147 G+ GL +PI++Y P+ +L +Y FK + PI I+ E+ + Sbjct: 70 GLTGLLASCGLAGSGQPIEIYGPPELKDYLKACAKYSHFKLPHHIRFHPIHPGILYEDKE 129 Query: 148 VPICMKSAGGVIEAIP 163 + S G + IP Sbjct: 130 FSV---SCGQLKHRIP 142 >gi|169342818|ref|ZP_02863852.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169299075|gb|EDS81147.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] Length = 284 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DIFKGMVTALKEK--- 131 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 I + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 132 DININTLSKSKSLPIDLGENTKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|303248556|ref|ZP_07334813.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] gi|302490086|gb|EFL50007.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] Length = 208 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + VD G P Q L E+ L+++AVL TH H DH++G+ L G F Sbjct: 21 GSAAIAVDVGGKPTAVAQFLEEKGLALEAVLLTHLHCDHLYGVGELAGAF 70 >gi|300855840|ref|YP_003780824.1| ribonuclease Z [Clostridium ljungdahlii DSM 13528] gi|300435955|gb|ADK15722.1| ribonuclease Z [Clostridium ljungdahlii DSM 13528] Length = 303 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 19/89 (21%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LGCG S+ VP +R S + S G + G + Sbjct: 4 LCLLGCGGSMPVP---------------DRYLTSMI----ASYNGKKLLIDCGEGTQVSL 44 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGL 95 ++L ++ +ID +L+TH HADHI G+ GL Sbjct: 45 KILGCKIKNIDVILFTHFHADHIAGLPGL 73 >gi|168211456|ref|ZP_02637081.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|170710587|gb|EDT22769.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] Length = 284 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DIFKGMVTALKEK--- 131 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 I + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 132 DININTLSKSKSLPIDLGENTKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|28211043|ref|NP_781987.1| hypothetical protein CTC01364 [Clostridium tetani E88] gi|28203482|gb|AAO35924.1| hypothetical membrane spanning protein [Clostridium tetani E88] Length = 648 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 25/201 (12%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + G N +++D GP+ +V+ + V +D V+ THPH DHI G+D + F Sbjct: 351 IQQDGKN--MLIDGGPNSSGKVVVDYLKSHGVTKLDYVIGTHPHEDHIGGLDVVINNF-- 406 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGG 157 I P + ++F+ A++++ T P + + N I S+ Sbjct: 407 ---EIGQVFMPKATANT-QTFKSVVTAINNKGLKITTPKVGESYNLGNAVWTILAPSS-- 460 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 ++ + + ++ L +FGN ++ +A E L+ + D LK G H S+ Sbjct: 461 --DSYTDVNNYSIVTKL--KFGNNSFIFTGDAEDVSEGEILKKQLDISADVLKVGHHGSN 516 Query: 218 FSLSESLKKIELINPKNAILT 238 S +E ++ +NPK A+++ Sbjct: 517 SSTTEDF--LKKVNPKYAVIS 535 >gi|228992885|ref|ZP_04152810.1| Ribonuclease Z [Bacillus pseudomycoides DSM 12442] gi|228766934|gb|EEM15572.1| Ribonuclease Z [Bacillus pseudomycoides DSM 12442] Length = 307 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG GA + P R S++ + + ERG T + D G Sbjct: 3 FVFLGTGAGV----------------PSKGRNVSAIALQLLEERGE--TWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 45 QILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|217963877|ref|YP_002349555.1| ribonuclease Z [Listeria monocytogenes HCC23] gi|254808646|sp|B8DBV5|RNZ_LISMH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|217333147|gb|ACK38941.1| ribonuclease Z [Listeria monocytogenes HCC23] gi|307571553|emb|CAR84732.1| ribonuclease Z [Listeria monocytogenes L99] Length = 306 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQIMRSQIKLSKLEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F + + +Y +++ S R L TY I N I Sbjct: 71 GLPGLLSSRSFQGGESDLTIYGPVGITEYVETSLRLSGTRL---TYKIIFNEI 120 >gi|290892130|ref|ZP_06555126.1| ribonuclease Z [Listeria monocytogenes FSL J2-071] gi|290558253|gb|EFD91771.1| ribonuclease Z [Listeria monocytogenes FSL J2-071] Length = 306 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQIMRSQIKLSKLEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F + + +Y +++ S R L TY I N I Sbjct: 71 GLPGLLSSRSFQGGESDLTIYGPVGITEYVETSLRLSGTRL---TYKIIFNEI 120 >gi|168216943|ref|ZP_02642568.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|182380886|gb|EDT78365.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 284 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DIFKGMVTALKEKDIN 134 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 +N + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 135 --INTLS-KSKSLPIDLGENTKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|94985707|ref|YP_605071.1| ribonuclease Z [Deinococcus geothermalis DSM 11300] gi|94555988|gb|ABF45902.1| ribonuclease Z [Deinococcus geothermalis DSM 11300] Length = 331 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGY 98 ++L ++ S +G T +++D D + ++ +ID +L++H H DH+ G D R Sbjct: 14 NALWVTANSGQG-QTRLLLDCDEDTLDGLPLAELQAIDHLLFSHLHMDHVAGFDRFFRAN 72 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCF 126 F + RP ++ P + L+ F+ C+ Sbjct: 73 FDRTTRPNHIWGPPGTARILWHRFQGCW 100 >gi|255028260|ref|ZP_05300211.1| hypothetical protein LmonL_01644 [Listeria monocytogenes LO28] Length = 165 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|260887824|ref|ZP_05899087.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|330838609|ref|YP_004413189.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|260862430|gb|EEX76930.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|329746373|gb|AEB99729.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 213 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 7/63 (11%) Query: 49 ERGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 E GS + +D G + Q ++E L++ A+L TH HADHI ID FL++K Sbjct: 22 EEGSKEAIAIDPGGSEETVWQHIQEDGLNLKAILNTHAHADHIGAID-----FLREKTGA 76 Query: 107 DVY 109 +Y Sbjct: 77 KLY 79 >gi|228998930|ref|ZP_04158514.1| Ribonuclease Z [Bacillus mycoides Rock3-17] gi|229006461|ref|ZP_04164115.1| Ribonuclease Z [Bacillus mycoides Rock1-4] gi|228754789|gb|EEM04180.1| Ribonuclease Z [Bacillus mycoides Rock1-4] gi|228760846|gb|EEM09808.1| Ribonuclease Z [Bacillus mycoides Rock3-17] Length = 307 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG GA + P R S++ + + ERG T + D G Sbjct: 3 FVFLGTGAGV----------------PSKGRNVSAIALQLLEERGE--TWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 45 QILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|182626105|ref|ZP_02953866.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177908626|gb|EDT71147.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 284 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K +D + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFDVDYFCAPKVTENT-DIFKGMVTALKEK--- 131 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 I + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 132 DININTLSKSKSLPIDLGENTKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|319949580|ref|ZP_08023625.1| beta-lactamase domain-containing protein [Dietzia cinnamea P4] gi|319436756|gb|EFV91831.1| beta-lactamase domain-containing protein [Dietzia cinnamea P4] Length = 283 Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 GS T V+VD GPD + + + V I+ V+ TH H DH GID LR + R ++ Sbjct: 48 GSPTCVVVDPGPDDRAHAERIAAIVGEIELVVVTHRHGDHTDGIDHLRAFTTAPVRAVE 106 >gi|254852872|ref|ZP_05242220.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|300763718|ref|ZP_07073715.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|258606206|gb|EEW18814.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|300515454|gb|EFK42504.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] Length = 306 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|222625443|gb|EEE59575.1| hypothetical protein OsJ_11872 [Oryza sativa Japonica Group] Length = 172 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%) Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 +Y + D+ + ++ +IE D+ S+G +P++ G + LGF FG Sbjct: 31 KYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSGLEFVPLPVMHGEGYVC-LGFLFGRKA 88 Query: 181 -VAYCTDVNAF-----PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 +AY +D+ F A S LD LI++A N LH E+L ++ I+PK Sbjct: 89 RIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLHG------EALDAVKRISPKR 140 Query: 235 AILTHMHVDLDY 246 A+LT M +++Y Sbjct: 141 ALLTGMAHEIEY 152 >gi|118431611|ref|NP_148202.2| ribonuclease Z [Aeropyrum pernix K1] gi|41017587|sp|Q9YAV8|RNZ_AERPE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116062935|dbj|BAA80840.2| ribonuclease Z [Aeropyrum pernix K1] Length = 310 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 55 TVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYA 110 TV++D G +++ + V SID + THPH DHI+G+ GL Q R P+ + + Sbjct: 34 TVLLDAGEGVQIRLRKVGVSPSSIDVLAITHPHGDHINGVAGLLMTMSLQSRRKPLTIIS 93 Query: 111 APDCMKHLFESF 122 + ++ + E+ Sbjct: 94 TSESLEFISETL 105 >gi|46908204|ref|YP_014593.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b F2365] gi|47093300|ref|ZP_00231070.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|226224575|ref|YP_002758682.1| hypothetical protein Lm4b_01989 [Listeria monocytogenes Clip81459] gi|254825533|ref|ZP_05230534.1| ribonuclease Z [Listeria monocytogenes FSL J1-194] gi|254931857|ref|ZP_05265216.1| ribonuclease Z [Listeria monocytogenes HPB2262] gi|56749436|sp|Q71Y44|RNZ_LISMF RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494137|sp|C1KWS1|RNZ_LISMC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|46881474|gb|AAT04770.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018320|gb|EAL09083.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225877037|emb|CAS05746.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583409|gb|EFF95441.1| ribonuclease Z [Listeria monocytogenes HPB2262] gi|293594775|gb|EFG02536.1| ribonuclease Z [Listeria monocytogenes FSL J1-194] gi|328466318|gb|EGF37475.1| ribonuclease Z [Listeria monocytogenes 1816] Length = 306 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|222444969|ref|ZP_03607484.1| hypothetical protein METSMIALI_00585 [Methanobrevibacter smithii DSM 2375] gi|222434534|gb|EEE41699.1| hypothetical protein METSMIALI_00585 [Methanobrevibacter smithii DSM 2375] Length = 306 Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 44/217 (20%) Query: 75 SIDAVLYTHPHADHIH-----------GIDGLRGYFLKQKRPIDVYA--APDCMK-HLFE 120 ++D V +H H DH + G+ G L K +D Y P K H Sbjct: 56 NLDGVFVSHAHTDHYNDAEILIEAMTRGMTKEYGVVLGNKSVLDGYERWGPGISKYHQSH 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S +Y ++ P +EN + C + P G + +R Sbjct: 116 SKKY------------VLEPNQVEN--INGCSVKGTKTVHGDP----EGVGFQIDYRGFK 157 Query: 181 VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS--SHFSLSESLKKIELINPKNAIL 237 ++Y +D F E L K + D LI L+ G S H ++ ++ + PK AI+ Sbjct: 158 ISYTSDTGYF--EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVKPKLAIM 215 Query: 238 THMHVDL-------DYDMVLKSTPSRVVPAFDGMQFS 267 TH + + + + K T + + AFDGM F Sbjct: 216 THFGLKMLSIDPIDEAKRITKETGVKTLAAFDGMSFE 252 >gi|295706507|ref|YP_003599582.1| ribonuclease Z [Bacillus megaterium DSM 319] gi|294804166|gb|ADF41232.1| ribonuclease Z [Bacillus megaterium DSM 319] Length = 309 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P +R SSL + + ERG+ + D G Q+L V I+ + TH H DHI+ Sbjct: 13 PAKQRNVSSLALELLQERGA--VWLFDCGEATQHQILHTTVKPRRIEKIFITHLHGDHIY 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 G+ GL G F + + VY P +K E Sbjct: 71 GLPGLLGSRSFQGGESLLTVY-GPKGIKEFIE 101 >gi|255018251|ref|ZP_05290377.1| hypothetical protein LmonF_12051 [Listeria monocytogenes FSL F2-515] Length = 262 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|229163080|ref|ZP_04291036.1| Ribonuclease Z [Bacillus cereus R309803] gi|228620486|gb|EEK77356.1| Ribonuclease Z [Bacillus cereus R309803] Length = 307 Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL G F P+ VY P +K E Sbjct: 44 HQILHTSIRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 101 >gi|313906064|ref|ZP_07839416.1| ribonuclease Z [Eubacterium cellulosolvens 6] gi|313469109|gb|EFR64459.1| ribonuclease Z [Eubacterium cellulosolvens 6] Length = 265 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 22/137 (16%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D + TH H DHI G+ L ++ I +YA ++++ ES + C K + + Y Sbjct: 49 LDGIFVTHEHLDHIKGLG-----VLARRHGIPIYATKGTLEYI-ESHKSCGK-IPEGLYH 101 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP 191 I D P+ + G + P H +G+ + A TD+ + Sbjct: 102 EI-------KADCPVTI----GDMTIEPFRISHDAAEPVGYHLSSEGRTAAIATDMGTYT 150 Query: 192 AESLEKLQNLDFLIIDA 208 ++ LQNLD L+++A Sbjct: 151 DYTIRHLQNLDVLLLEA 167 >gi|16804016|ref|NP_465501.1| hypothetical protein lmo1977 [Listeria monocytogenes EGD-e] gi|224501222|ref|ZP_03669529.1| hypothetical protein LmonFR_01655 [Listeria monocytogenes FSL R2-561] gi|41017570|sp|Q8Y5S8|RNZ_LISMO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|16411430|emb|CAD00055.1| lmo1977 [Listeria monocytogenes EGD-e] Length = 306 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|47096621|ref|ZP_00234209.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254899325|ref|ZP_05259249.1| hypothetical protein LmonJ_05914 [Listeria monocytogenes J0161] gi|254912536|ref|ZP_05262548.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] gi|254936863|ref|ZP_05268560.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|284802422|ref|YP_003414287.1| hypothetical protein LM5578_2178 [Listeria monocytogenes 08-5578] gi|284995564|ref|YP_003417332.1| hypothetical protein LM5923_2129 [Listeria monocytogenes 08-5923] gi|47015006|gb|EAL05951.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258609458|gb|EEW22066.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|284057984|gb|ADB68925.1| hypothetical protein LM5578_2178 [Listeria monocytogenes 08-5578] gi|284061031|gb|ADB71970.1| hypothetical protein LM5923_2129 [Listeria monocytogenes 08-5923] gi|293590521|gb|EFF98855.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] Length = 306 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|331675618|ref|ZP_08376365.1| phosphonate metabolism protein PhnP [Escherichia coli TA280] gi|331067226|gb|EGI38634.1| phosphonate metabolism protein PhnP [Escherichia coli TA280] Length = 252 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 35/259 (13%) Query: 17 GVPRITGDWGAC--DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 GVP + AC +P+ RR S + + ++ ++D G + R Sbjct: 15 GVPAWGCECAACVRARRSPQYRRQPCSGVV-----KFNDAITLIDAG--LHDLADRWSPG 67 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 S L TH H DH+ G+ LR Q I VY PD + FK + Sbjct: 68 SFQQFLLTHYHMDHVQGLFPLRWGVGDQ---IPVYGPPD-----EQGCDDLFKHSGLLDF 119 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNAFP 191 V P V M G ++ P+ H +++ L VA+ +D P Sbjct: 120 SHTVEPFV---------MFDLQG-LQVTPLPLNHSKLTFGYLLETAHNRVAWLSDTAGLP 169 Query: 192 AESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++L+ L+N ++ID + +H L+ L ++I ILTH+ D Sbjct: 170 EKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDA 229 Query: 247 DMVLKSTPSRVVPAFDGMQ 265 ++ PS FDGM+ Sbjct: 230 WLMENVLPSGFEAGFDGME 248 >gi|313607871|gb|EFR84034.1| ribonuclease Z [Listeria monocytogenes FSL F2-208] Length = 306 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NKIWLFDCGEATQHQIMRSQIKLSKLEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F + + +Y +++ S R L TY I N I Sbjct: 71 GLPGLLSSRSFQGGESDLTIYGPVGITEYVETSLRLSGTRL---TYKIIFNEI 120 >gi|224498572|ref|ZP_03666921.1| hypothetical protein LmonF1_02299 [Listeria monocytogenes Finland 1988] Length = 306 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|218193393|gb|EEC75820.1| hypothetical protein OsI_12783 [Oryza sativa Indica Group] Length = 757 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%) Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 +Y + D+ + ++ +IE D+ S+G +P++ G + LGF FG Sbjct: 37 KYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSGLEFVPLPVMHGEGYVC-LGFLFGRKA 94 Query: 181 -VAYCTDVNAF-----PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 +AY +D+ F A S LD LI++A N LH E+L ++ I+PK Sbjct: 95 RIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLHG------EALDAVKRISPKR 146 Query: 235 AILTHMHVDLDY 246 A+LT M +++Y Sbjct: 147 ALLTGMAHEIEY 158 >gi|254827137|ref|ZP_05231824.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258599520|gb|EEW12845.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] Length = 306 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R Q+ ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|319778559|ref|YP_004129472.1| Hydroxyacylglutathione hydrolase [Taylorella equigenitalis MCE9] gi|317108583|gb|ADU91329.1| Hydroxyacylglutathione hydrolase [Taylorella equigenitalis MCE9] Length = 271 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYA 110 ++ Q L +DAVL TH H DH+ G+ G+ +F Q P+DVY Sbjct: 39 VQSQNLVLDAVLITHHHNDHVGGVKGIVDFFSHVQANPVDVYG 81 >gi|148643533|ref|YP_001274046.1| beta-lactamase superfamily hydrolase [Methanobrevibacter smithii ATCC 35061] gi|148552550|gb|ABQ87678.1| metal-dependent hydrolase, beta-lactamase superfamily [Methanobrevibacter smithii ATCC 35061] Length = 306 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 44/217 (20%) Query: 75 SIDAVLYTHPHADHIH-----------GIDGLRGYFLKQKRPIDVYA--APDCMK-HLFE 120 ++D V +H H DH + G+ G L K +D Y P K H Sbjct: 56 NLDGVFVSHAHTDHYNDAEILIEAMTRGMTKEYGVVLGNKSVLDGYEKWGPGISKYHQSH 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S +Y ++ P +EN + C + P G + +R Sbjct: 116 SKKY------------VLEPNQVEN--INGCSVKGTKTVHGDP----EGVGFQIDYRGFK 157 Query: 181 VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS--SHFSLSESLKKIELINPKNAIL 237 ++Y +D F E L K + D LI L+ G S H ++ ++ + PK AI+ Sbjct: 158 ISYTSDTGYF--EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVKPKLAIM 215 Query: 238 THMHVDL-------DYDMVLKSTPSRVVPAFDGMQFS 267 TH + + + + K T + + AFDGM F Sbjct: 216 THFGLKMLSIDPIDEAKRITKETGVKTLAAFDGMSFE 252 >gi|53749411|gb|AAU90269.1| hypothetical protein [Oryza sativa Japonica Group] gi|108710050|gb|ABF97845.1| phosphonate metabolism protein, putative [Oryza sativa Japonica Group] Length = 153 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 18/132 (13%) Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 +Y + D+ + ++ +IE D+ S+G +P++ G + LGF FG Sbjct: 12 KYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSGLEFVPLPVMHGEGYVC-LGFLFGRKA 69 Query: 181 -VAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 +AY +D+ F ++ + LD LI++A N LH E+L ++ I+PK Sbjct: 70 RIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLHG------EALDAVKRISPKR 121 Query: 235 AILTHMHVDLDY 246 A+LT M +++Y Sbjct: 122 ALLTGMAHEIEY 133 >gi|21243841|ref|NP_643423.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas axonopodis pv. citri str. 306] gi|32129903|sp|Q8PHY4|PQQB_XANAC RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|21109439|gb|AAM37959.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas axonopodis pv. citri str. 306] Length = 299 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 17/101 (16%) Query: 9 ILGCGASLGVPR----ITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + A T+ RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTSASLRAWQQTDGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 Q+L L I+AVL T DHI G+ +R Sbjct: 61 RQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIVGLLSMR 101 >gi|323975365|gb|EGB70467.1| phosphonate metabolism protein PhnP [Escherichia coli TW10509] Length = 252 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 37/260 (14%) Query: 17 GVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 GVP + AC +P+ RR S + + ++ ++D G + R Sbjct: 15 GVPAWGCECAACARARRSPQYRRQPCSGVV-----KFNDAITLIDAG--LHDLADRWSPG 67 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-T 133 S L TH H DH+ G+ LR I VY PD + DD Sbjct: 68 SFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPVYGPPD------------EQGCDDLFK 112 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNAF 190 +P +++ + P M G ++ P+ H +++ L VA+ +D Sbjct: 113 HPGLLD---FSHTVEPFVMFDLQG-LQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGL 168 Query: 191 PAESLEKLQN--LDFLIIDALKNGLHSS---HFSLSESLKKIELINPKNAILTHMHVDLD 245 P ++++ L+N ++ID +S H L+ L E+I +LTH+ LD Sbjct: 169 PEKTVKFLRNNQPQVMVIDCSHPPRANSPRNHCDLNTVLALNEVIRSPRVVLTHISHQLD 228 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ PS FDGM+ Sbjct: 229 VWLMENVLPSGFEAGFDGME 248 >gi|15616523|ref|NP_244829.1| hypothetical protein BH3961 [Bacillus halodurans C-125] gi|10176586|dbj|BAB07680.1| BH3961 [Bacillus halodurans C-125] Length = 295 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R N TV+VDTG + + ++Q+ ID ++ THPHADHI D + + ++ Sbjct: 65 RSENYTVLVDTGRHDSDAIFTHLEKQQIDQIDLLILTHPHADHIGNADEIVRLYSPEEVW 124 Query: 106 ID 107 ID Sbjct: 125 ID 126 >gi|90415976|ref|ZP_01223909.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] gi|90332350|gb|EAS47547.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] Length = 253 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFKALD 130 +IDA+L TH H+DH G+ L F IDVY CM+ S R Y FK +D Sbjct: 48 NIDAILVTHEHSDHWKGVVPLASKF-----AIDVYVTAGCMRSRKASGRDYPFKVMD 99 >gi|78048801|ref|YP_364976.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123584446|sp|Q3BQI7|PQQB_XANC5 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|78037231|emb|CAJ24976.1| coenzyme PQQ synthesis protein B [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 299 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 17/101 (16%) Query: 9 ILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ A T+ RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTLASLRAWQQTDGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 Q+L L I+AVL T DHI G+ +R Sbjct: 61 RQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR 101 >gi|325927560|ref|ZP_08188795.1| coenzyme PQQ biosynthesis protein B [Xanthomonas perforans 91-118] gi|325542065|gb|EGD13572.1| coenzyme PQQ biosynthesis protein B [Xanthomonas perforans 91-118] Length = 299 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 17/101 (16%) Query: 9 ILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ A T+ RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTPASLRAWQQTDGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 Q+L L I+AVL T DHI G+ +R Sbjct: 61 RQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR 101 >gi|258515302|ref|YP_003191524.1| beta-lactamase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779007|gb|ACV62901.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 294 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 27/216 (12%) Query: 56 VIVDTGPD----FYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G + ++ LREQ V ID ++ THPH DHI G+D + F I Sbjct: 70 ILVDAGNNEDGPLVVEYLREQGVQKIDYLVATHPHEDHIGGMDNVIKNF-----EIGKVF 124 Query: 111 APD--CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ FE KA D + V+E +++ + P + Sbjct: 125 MPNIQTTTKTFEDVLLALKAKDLKITTAKAGVSVLEQDNLKMNF--------VAPNKNNY 176 Query: 169 GRISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 +++ + ++G+ A+ +A E L L D LK G H S+ S + Sbjct: 177 EDLNNWSAVMRVQYGDTAFLLTGDAEQLSEKEMLAAGANLKADVLKIGHHGSNSSTGK-- 234 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 K + + P+ A+++ + D DY K T +R+ A Sbjct: 235 KFLNAVAPEYAVIS-VGKDNDYGHPHKETLARLTKA 269 >gi|255024225|ref|ZP_05296211.1| ribonuclease Z [Listeria monocytogenes FSL J1-208] Length = 279 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 9/113 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R +S+ +S ++ER NT + D G Q++R ++ ++ + TH H DHI Sbjct: 22 PSRGRNVTSIALSMLNER--NTIWLFDCGEATQHQIMRSPIKLSKLEKIFITHLHGDHIF 79 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 G+ GL F + + +Y +++ S R L TY I N I Sbjct: 80 GLPGLLSSRSFQGGESDLTIYGPVGITEYVETSLRLSGTRL---TYKIIFNEI 129 >gi|172038978|ref|YP_001805479.1| ribonuclease Z [Cyanothece sp. ATCC 51142] gi|254808625|sp|B1WQW1|RNZ_CYAA5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|171700432|gb|ACB53413.1| putative Ribonuclease Z [Cyanothece sp. ATCC 51142] Length = 312 Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 20/168 (11%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR ++ I + TH H DHI+ Sbjct: 13 PTRSRNVSSVAL-RLPQRAE--VWLFDCGEGTQHQLLRSDVKISQITRIFVTHMHGDHIY 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENND 147 G+ GL +PI++Y P+ +L +Y FK + PI I+ E+ + Sbjct: 70 GLTGLLASCGLAGSGQPIEIYGPPELKDYLKACAKYSHFKLPHHIRFHPIHPGILYEDAE 129 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 + L +H RI + G+R N A+SL Sbjct: 130 FSVSCN-----------LLKH-RIPAYGYRIAESDRPGRFNVEKAKSL 165 >gi|114567949|ref|YP_755103.1| hypothetical protein Swol_2443 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338884|gb|ABI69732.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 285 Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 59/223 (26%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP------DCMKHLF 119 +Q + + +DAVL TH H DHI G+D F++ K + V+A P DC K Sbjct: 39 LQAIGTRAGELDAVLLTHEHTDHIKGLD----VFIR-KYQLPVFARPATWSKIDCRKKFP 93 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 C K L+ T+ + ++IE P H I +GF F Sbjct: 94 GE---CIKELEG-TFS--LGKVLIE------------------PFAISHDAIDPVGFCFY 129 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNG--------------LHS 215 TD+ E + L D ++++ LKNG H Sbjct: 130 YGKRKAVIATDLGMVSREVEKALSFSDIAVLESNHDPQMLKNGPYPPYLKKRIEGREGHL 189 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 S+F + L + NP +L H+ ++ M+ + T S+++ Sbjct: 190 SNFDTARLLSTVPRHNPMQVLLAHISQQNNHPMLAQQTVSKIM 232 >gi|167855602|ref|ZP_02478362.1| glyoxalase II family protein [Haemophilus parasuis 29755] gi|167853293|gb|EDS24547.1| glyoxalase II family protein [Haemophilus parasuis 29755] Length = 209 Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 54 TTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 VI+D G D ++ + EQ L++ +L TH H DHI +D LR +F +DV+ + Sbjct: 25 NAVIIDAGDDADKIIRFVEEQQLNVQKLLITHGHLDHIMAVDQLRKHF-----NVDVFGS 79 Query: 112 PDCMKHLFES 121 + LFE Sbjct: 80 HQNDQPLFEQ 89 >gi|294667038|ref|ZP_06732265.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603195|gb|EFF46619.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 17/101 (16%) Query: 9 ILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ A T+ RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTCASLRAWQQTDGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 Q+L L I+AVL T DHI G+ +R Sbjct: 61 RQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR 101 >gi|226228101|ref|YP_002762207.1| ribonuclease Z [Gemmatimonas aurantiaca T-27] gi|259494135|sp|C1AAD9|RNZ_GEMAT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|226091292|dbj|BAH39737.1| ribonuclease Z [Gemmatimonas aurantiaca T-27] Length = 314 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 12/110 (10%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHI 89 + P R S++ ++R E T++ D G Q++R V ++ V +TH H+DH+ Sbjct: 13 SRPTVERGVSAISLTREGE-----TLLFDCGEGTQRQMMRYGVSFALSDVFFTHVHSDHL 67 Query: 90 HGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 GI GL Q R P+ ++ K L R C +RT P+ Sbjct: 68 LGITGLLRTMALQGRTEPLRLWTPRSTAKTL----RQCINIGGERTTFPV 113 >gi|55379432|ref|YP_137282.1| ATP-binding protein PhnP [Haloarcula marismortui ATCC 43049] gi|55232157|gb|AAV47576.1| ATP-binding protein PhnP [Haloarcula marismortui ATCC 43049] Length = 291 Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 +P RS ++ V + +++VD PDF Q LRE V DA + TH H DH+ G Sbjct: 44 DPTGGVERSRFSVA-VENDTTGESLLVDLSPDFRHQFLRESVPLPDAAIITHIHFDHLDG 102 Query: 92 I 92 + Sbjct: 103 L 103 >gi|294626833|ref|ZP_06705425.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598847|gb|EFF42992.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 299 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 17/101 (16%) Query: 9 ILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ A T+ RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTCASLRAWQQTDGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 Q+L L I+AVL T DHI G+ +R Sbjct: 61 RQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR 101 >gi|212550456|ref|YP_002308773.1| ribonuclease Z [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254808604|sp|B6YQ90|RNZ_AZOPC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|212548694|dbj|BAG83362.1| ribonuclease Z [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 289 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 39/181 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L TR SL V+ G + G Sbjct: 4 FEVNILGCGSALPA-------------------TRHSLSSQIVNLNGELYMIDCGEGSQL 44 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFESF 122 + + + ++ + +H H DH G+ GL F+ R +D +Y+ PD K LF+ Sbjct: 45 QFRAMNLKFQRLNHIFISHLHGDHCFGLLGLVSMFVLLGRTVDLCIYSHPD-TKCLFQPL 103 Query: 123 -RYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 +Y FK L + + P + ++ E+ V+ I +H R+ ++GF Sbjct: 104 IKYFFKELPFQVVFHPFDPTCSGLIFEDQ-----------VLRVFTIPLKH-RVPTVGFL 151 Query: 178 F 178 F Sbjct: 152 F 152 >gi|4514331|dbj|BAA75374.1| ComEC [Bacillus halodurans] Length = 266 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R N TV+VDTG + + ++Q+ ID ++ THPHADHI D + + ++ Sbjct: 36 RSENYTVLVDTGRHDSDAIFTHLEKQQIDQIDLLILTHPHADHIGNADEIVRLYSPEEVW 95 Query: 106 ID 107 ID Sbjct: 96 ID 97 >gi|120536851|ref|YP_956909.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120326685|gb|ABM20994.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 251 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 45/273 (16%) Query: 8 TILGCGASLGVPRITGDWGAC--DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G + GVPR + AC P+ RR S + R +++D G Sbjct: 4 TFTGTAGAGGVPRYGCECAACVRARQQPEYRRRPCSALVETNQVR-----LLLDAG---- 54 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + + +Q S++A++ TH HADH+ G+ LR + + P+ PD L+++ Sbjct: 55 LMDIHDQFPAGSLNAIVLTHFHADHVQGLFHLR-WGKGARLPVFCPPDPDGCADLYKN-- 111 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 + D + P I G ++ P+ H +I + G+ N Sbjct: 112 ---SGILDFRHLESFKPFEI-------------GDLKITPLPLNHSKI-TYGYAIENQSG 154 Query: 181 --VAYCTDVNAFPAESLEKLQN---LDFLIIDALKNGLHS--SHFSLSESLKKIELINPK 233 AY TD P S+ L++ + + +HS +H + +L I ++P+ Sbjct: 155 QRFAYLTDTVGLPENSMHFLKSWGPFSMALDCSYPPQVHSPTNHNDYNLALNIINNVSPQ 214 Query: 234 NAILTHMHVDLDYDMVLKST--PSRVVPAFDGM 264 LTH+ +LD + + S + A DG+ Sbjct: 215 KGWLTHLSHELDLWRIENNCKLESNLAWAADGL 247 >gi|150016614|ref|YP_001308868.1| ribonuclease Z [Clostridium beijerinckii NCIMB 8052] gi|189043781|sp|A6LU82|RNZ_CLOB8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|149903079|gb|ABR33912.1| ribonuclease Z [Clostridium beijerinckii NCIMB 8052] Length = 308 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 22/117 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG + +P NR ++L ++ RG V G M++ Sbjct: 6 LLGCGGGMPMP---------------NRFLSATL----INYRGRKILVDCGEGTQVSMRI 46 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFR 123 SID + TH H DHI G+ GL G R PI + P+ ++ E R Sbjct: 47 SNTGFKSIDIICITHIHGDHIVGLPGLLGTIGNSGRTEPITI-IGPEGIRETVEKLR 102 >gi|23098337|ref|NP_691803.1| late competence protein [Oceanobacillus iheyensis HTE831] gi|22776563|dbj|BAC12838.1| late competence protein [Oceanobacillus iheyensis HTE831] Length = 290 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%) Query: 55 TVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T+++D GP + ++++ ID ++ THP DHI G+ LK ++V Sbjct: 52 TILIDGGPPEAGEKVVDYIKKQKINQIDVLISTHPDIDHIGGL-------LKVLDSVEVE 104 Query: 110 AAPDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 A D K H ++F L D P+ + DVPI + + I + + Sbjct: 105 EAYDTGKLHPTKTFANYINKLRDLEI-----PVHLAEKDVPIEVDP----MIQIDVWNSY 155 Query: 169 GRISS-------LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 R S+ L +G++ + ++ + ++N D + + +K G H S S Sbjct: 156 HRFSTNNESSIVLKLTYGDIDMLLMSDVGKSQEKQIMKNYD-IQAEVIKVGHHGS--KTS 212 Query: 222 ESLKKIELINPKNAILTH 239 SLK ++ ++PK +ILT+ Sbjct: 213 SSLKFLQEVSPKISILTY 230 >gi|227512142|ref|ZP_03942191.1| ribonuclease Z [Lactobacillus buchneri ATCC 11577] gi|227524129|ref|ZP_03954178.1| ribonuclease Z [Lactobacillus hilgardii ATCC 8290] gi|227084536|gb|EEI19848.1| ribonuclease Z [Lactobacillus buchneri ATCC 11577] gi|227088707|gb|EEI24019.1| ribonuclease Z [Lactobacillus hilgardii ATCC 8290] Length = 314 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 34/160 (21%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P R SSL + + E N+ + D G Q+LR + ID + +H H DHI Sbjct: 13 SPGKFRNVSSLALRLLDE--INSVWLFDVGEGTQHQILRSTIRPRKIDKIFISHLHGDHI 70 Query: 90 HGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE----------SFRYCFKALDDRTYPPI 137 G+ GL F P+D+Y P +K E S++ F L +T Sbjct: 71 FGLPGLLSSRSFQGGFEPLDIY-GPKGIKEYVEVSLKISESHLSYKIRFHELTKQT---- 125 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 N ++ E+N + A P+ RI S+G+R Sbjct: 126 -NGLIFEDNKFSVY---------AAPLDH---RILSIGYR 152 >gi|307720231|ref|YP_003891371.1| cyclic-AMP phosphodiesterase [Sulfurimonas autotrophica DSM 16294] gi|306978324|gb|ADN08359.1| cyclic-AMP phosphodiesterase [Sulfurimonas autotrophica DSM 16294] Length = 260 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 10/97 (10%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYAA 111 N ++D G + L E L I+ + TH H DHI I + YF K+ + +++ Sbjct: 27 NRHTVIDAGN--LLDALAEDSLHIENIYLTHSHLDHISDIAYIIDNYFCKRSKTLNIIGL 84 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 P ++ L E F L+D +P + I +EN+DV Sbjct: 85 PQTIQALKEHF------LNDIIWPDF-SKIPLENSDV 114 >gi|315302378|ref|ZP_07873251.1| late competence protein [Listeria ivanovii FSL F6-596] gi|313629251|gb|EFR97511.1| late competence protein [Listeria ivanovii FSL F6-596] Length = 376 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 6/50 (12%) Query: 48 SERGSNTTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 SE G TT+++DTG D + +L+E +V ID +L THPHADHI D Sbjct: 56 SEDG--TTILIDTGRQDDDRILTLLKEAKVEKIDLLLLTHPHADHIGNAD 103 >gi|253681233|ref|ZP_04862031.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] gi|253562471|gb|EES91922.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] Length = 262 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 35/168 (20%) Query: 53 NTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N+++++D G + +Q + + ID + TH H DHI G+ L ++ I Sbjct: 21 NSSILIDAGLPGKHIEKALQSINKNPNEIDGIFVTHEHIDHIKGVG-----VLSRRYDIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ- 166 +YA K +F++ I+ ++ I K G I+ + I Sbjct: 76 IYANELTWKSMFKNIGK------------------IKEENIKIIYKKQGITIKDMDIFNY 117 Query: 167 --QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H I +G+ V TD+ F E E +N D +++++ Sbjct: 118 SISHDAIDPVGYSIYSGEKKVCIATDLGYFSEEVKENTKNADVVLLES 165 >gi|219872272|ref|YP_002476647.1| glyoxalase II family protein [Haemophilus parasuis SH0165] gi|219692476|gb|ACL33699.1| glyoxalase II family protein [Haemophilus parasuis SH0165] Length = 209 Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 54 TTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 VI+D G D ++ + EQ L++ +L TH H DHI +D LR +F +DV+ + Sbjct: 25 NAVIIDAGDDADKIIRFVEEQQLNVQKLLITHGHLDHIMAVDRLRKHF-----NVDVFGS 79 Query: 112 PDCMKHLFES 121 + LFE Sbjct: 80 HQNDQPLFEQ 89 >gi|325958402|ref|YP_004289868.1| Ribonuclease Z [Methanobacterium sp. AL-21] gi|325329834|gb|ADZ08896.1| Ribonuclease Z [Methanobacterium sp. AL-21] Length = 302 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 10/126 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P N R S+L + E ++ D G Q+ R ++ + ID + TH H DHI Sbjct: 13 PTNNRNHSALALKAFGE-----IILFDCGEGTQRQMTRARLSPMKIDRIFVTHFHGDHIL 67 Query: 91 GIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD-DRTYPPIVNPIVIENND 147 GI GL F ++ +++Y P + L + + AL + I + V+E +D Sbjct: 68 GIPGLIQSMAFRGRRDTLEIYGPPGIQELLNSMKKLGYFALSFNIAVHEIKDGTVLEEDD 127 Query: 148 VPICMK 153 I + Sbjct: 128 FKISAQ 133 >gi|20091849|ref|NP_617924.1| ribonuclease Z [Methanosarcina acetivorans C2A] gi|41017565|sp|Q8TLK5|RNZ_METAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|19917040|gb|AAM06404.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] Length = 305 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 30/128 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G SL P R S++ I+R E ++ D G Sbjct: 3 RITFLGTGGSL----------------PTRNRNPSAVMINREGE-----LMLFDCGEGTQ 41 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFES 121 Q++R + ++S+ ++ +H HADH GI GL F+ +K P+ +Y + Sbjct: 42 QQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFMGRKDPLMIYGPAGTRE----- 96 Query: 122 FRYCFKAL 129 F FKAL Sbjct: 97 FTELFKAL 104 >gi|304316025|ref|YP_003851170.1| hypothetical protein Tthe_0523 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777527|gb|ADL68086.1| conserved hypothetical protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 280 Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 117/297 (39%), Gaps = 56/297 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F ILG G +PR C K + R SL + + ++VDT D Sbjct: 3 FIILGSGGCTAIPRPLCKCKICKEAREKGKPYSRFGCSLFLD-------DLKLLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQKR------PIDVYAAPDC 114 + + +++VL++H DH G+ + +R +L+ PIDV+A Sbjct: 56 IVHALNYANIQQVNSVLFSHIDPDHTLGMRVFEHMRLDWLQISEGKECSNPIDVFAMDHV 115 Query: 115 MKHL------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 M + F S+ ++ + + +V+ V +D+ I A + + +Q Sbjct: 116 MSDVNSIGSKFGSYLDYYENIRNIIKRKVVSDFVYL-DDIKITFIKANSA--TVFVFEQ- 171 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNG--------LH 214 G R A C DV FP + + D +II + LK+G L Sbjct: 172 ------GKRKAIYAPC-DVKPFPNNDI--FTDTDIMIIGNTVIGEILKDGFILEENNSLR 222 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQFS 267 + FS++E + K I+TH+ D YD + L+ +V A+DGM F Sbjct: 223 NELFSMNEIEQLKNDYGIKKVIITHIEEDWGKSYDDYLELQKQYKDIVFAYDGMTFE 279 >gi|288925030|ref|ZP_06418966.1| ribonuclease Z [Prevotella buccae D17] gi|288338220|gb|EFC76570.1| ribonuclease Z [Prevotella buccae D17] Length = 304 Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 41/156 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N ++ ++ + E+ +VD G MQ+ Sbjct: 8 ILGCGSAL-------------PTLKHN----ATSQVVEIREK----LFMVDCGEGTQMQL 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFES--- 121 R ++ I AV +H H DH G+ G+ F L + + VY AP+ + + +S Sbjct: 47 RRSRIRFTKISAVFISHLHGDHCFGLIGMISTFGMLGRTASLHVY-APEALGPMLQSQLD 105 Query: 122 -------FRYCFKALDDRTYPPIVNPIVIENNDVPI 150 F F A+D P VN +V E+ + + Sbjct: 106 LFCQGLEFEVVFHAVD-----PKVNKVVYEDRSLTV 136 >gi|227509461|ref|ZP_03939510.1| ribonuclease Z [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191173|gb|EEI71240.1| ribonuclease Z [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 315 Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 34/160 (21%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P R SSL + + E N+ + D G Q+LR + ID + +H H DHI Sbjct: 13 SPGKFRNVSSLALRLLDE--INSVWLFDVGEGTQHQILRSTIRPRKIDKIFISHLHGDHI 70 Query: 90 HGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE----------SFRYCFKALDDRTYPPI 137 G+ GL F P+D+Y P +K E S++ F L +T Sbjct: 71 FGLPGLLSSRSFQGGFEPLDIY-GPKGIKEYVEVSLKISESHLSYKIRFHELTKQT---- 125 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 N ++ E+N + A P+ RI S+G+R Sbjct: 126 -NGLIFEDNKFSVY---------AAPLDH---RILSIGYR 152 >gi|153853269|ref|ZP_01994678.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] gi|149754055|gb|EDM63986.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] Length = 265 Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 22/138 (15%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ++ +L TH H DHI G+ G F +K I +YA P + E R C K+L + Sbjct: 48 ELEGILITHEHVDHIQGL----GVF-SRKYEIPIYATPGTI----EGIRNC-KSL-GKLP 96 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAF 190 +++ I IE+ P + G + P H G+R N VA TD+ + Sbjct: 97 EGLLHEIEIEH---PFSL----GTLNIDPFAISHDANEPSGYRIENGKKSVAVATDLGVY 149 Query: 191 PAESLEKLQNLDFLIIDA 208 ++E L +L+ ++++A Sbjct: 150 DDYTVEHLSDLNAVVLEA 167 >gi|238604131|ref|XP_002396125.1| hypothetical protein MPER_03707 [Moniliophthora perniciosa FA553] gi|215468078|gb|EEB97055.1| hypothetical protein MPER_03707 [Moniliophthora perniciosa FA553] Length = 131 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPH 85 P KN R +S + + T+++D G F + + ++ IDA+L TH H Sbjct: 45 PEGKKNVRRNTSAVVRIDGKDDRKITIVIDAGKTFQAAAVEWFPKFKLRRIDALLLTHAH 104 Query: 86 ADHIHGIDGLR 96 AD ++G+D LR Sbjct: 105 ADAMNGLDDLR 115 >gi|166368148|ref|YP_001660421.1| ribonuclease Z [Microcystis aeruginosa NIES-843] gi|189043786|sp|B0JGG3|RNZ_MICAN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166090521|dbj|BAG05229.1| ribonuclease Z [Microcystis aeruginosa NIES-843] Length = 318 Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR + S I + TH H DHI Sbjct: 13 PTRSRNVSSIAL-RLPQRAE--IWLFDCGEGTQHQLLRSDLKSSQIRRIFITHMHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 G+ GL + ID+Y P +L +Y + L +R ++P ++ ++ Sbjct: 70 GLMGLLASIGLAGSAQDIDIYGPPGLGDYLRACAKYSYTNLANRVRVHAISPGILYEDE 128 >gi|315634014|ref|ZP_07889303.1| hydroxyacylglutathione hydrolase [Aggregatibacter segnis ATCC 33393] gi|315477264|gb|EFU68007.1| hydroxyacylglutathione hydrolase [Aggregatibacter segnis ATCC 33393] Length = 233 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDC 114 D +L EQ LS+DA+L TH HADH +G+ KQ+ P + +Y +C Sbjct: 32 DKLFHLLEEQHLSVDALLLTHNHADHTNGVAA-----FKQRFPQVPIYGPAEC 79 >gi|306821244|ref|ZP_07454858.1| ComEC/Rec2 family protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550756|gb|EFM38733.1| ComEC/Rec2 family protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 288 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 10/68 (14%) Query: 52 SNTTVIVDTGPDFY----MQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S TV++D G + + + +RE+ + +D V+ THP ADHI G+D + F I Sbjct: 58 SGKTVLIDAGDEAHAKKVVNYIRERGIEKLDLVIATHPDADHIGGMDKVIKNF-----DI 112 Query: 107 DVYAAPDC 114 DV+A PD Sbjct: 113 DVFAMPDV 120 >gi|296131710|ref|YP_003638957.1| hypothetical protein TherJR_0165 [Thermincola sp. JR] gi|296030288|gb|ADG81056.1| conserved hypothetical protein [Thermincola potens JR] Length = 266 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 10/74 (13%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + NT+VIVD G + +Q + E S+ A+L TH H+DHI G+ L Q+ Sbjct: 18 KSDNTSVIVDAGMSGKALEAKIQAMGELCESLSAILITHEHSDHIKGVG-----VLAQRY 72 Query: 105 PIDVYAAPDCMKHL 118 + VY + L Sbjct: 73 DLPVYVTEKTWRAL 86 >gi|302340107|ref|YP_003805313.1| hypothetical protein Spirs_3633 [Spirochaeta smaragdinae DSM 11293] gi|301637292|gb|ADK82719.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293] Length = 290 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ G P + + AC + R R + S N +V++D PD + Q L Sbjct: 6 LGTGAAEGFPGLFCECAAC-----RKARDRRGKNLKMRSCTLLNDSVLIDISPDIFAQSL 60 Query: 70 RE--QVLSIDAVLYTHPHADHI 89 ++ I A++ TH H DH+ Sbjct: 61 SFGIRMSKIKAIVCTHSHEDHL 82 >gi|315608068|ref|ZP_07883061.1| ribonuclease Z [Prevotella buccae ATCC 33574] gi|315250537|gb|EFU30533.1| ribonuclease Z [Prevotella buccae ATCC 33574] Length = 304 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 41/156 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N ++ ++ + E+ +VD G MQ+ Sbjct: 8 ILGCGSAL-------------PTLKHN----ATSQVVEIREK----LFMVDCGEGTQMQL 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFES--- 121 R + I AV +H H DH G+ G+ F L + + VY AP+ + + +S Sbjct: 47 RRSHIRFTKISAVFISHLHGDHCFGLIGMISTFGMLGRTASLHVY-APEALGPMLQSQLD 105 Query: 122 -------FRYCFKALDDRTYPPIVNPIVIENNDVPI 150 F F A+D P VN +V E+ + + Sbjct: 106 LFCQGLEFEVVFHAVD-----PKVNKVVYEDRSLTV 136 >gi|312793414|ref|YP_004026337.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180554|gb|ADQ40724.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 295 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 38/202 (18%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N V++D+GP D + R V +D V+ THPH DHI +D + Sbjct: 66 NKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI------------ 113 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-----MKSAGGVIEAI 162 K+ E F K + +T+ ++N + +N + I +K G + + Sbjct: 114 ------ISKYDIERFYTINKTTNTQTFEDMLNALKKKNLKISIARPFDRLKLNGVTLTFL 167 Query: 163 PILQQHGRISS------LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 L+ + ++ L F V + D++ + ++N+ + D LK H S Sbjct: 168 SPLKDYDDLNDSSVVVMLEFAGKRVLFTGDIS--KNVEYDIVRNVHDIKADVLKVSHHGS 225 Query: 217 HFSLSESLKKIELINPKNAILT 238 + + S +E +NPK AI++ Sbjct: 226 YAATSSLF--LEKVNPKVAIIS 245 >gi|320333058|ref|YP_004169769.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319754347|gb|ADV66104.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 348 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYA 110 +T +++D G D +V +L ID +L++H H DH+ G D R F + R V+ Sbjct: 25 QHTRLLLDCGADVLREVPLADILRIDHLLFSHLHMDHVCGFDAFFRANFGRVDRENHVWG 84 Query: 111 APD---CMKHLFESFRY 124 P + H F+ + + Sbjct: 85 PPGTIAAIHHRFQGYWW 101 >gi|52080917|ref|YP_079708.1| ribonuclease Z [Bacillus licheniformis ATCC 14580] gi|52786292|ref|YP_092121.1| ribonuclease Z [Bacillus licheniformis ATCC 14580] gi|319645126|ref|ZP_07999359.1| ribonuclease Z [Bacillus sp. BT1B_CT2] gi|76363374|sp|Q65HN6|RNZ_BACLD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|52004128|gb|AAU24070.1| RNase Z responsible for the maturation of the 3' end of tRNA [Bacillus licheniformis ATCC 14580] gi|52348794|gb|AAU41428.1| YqjK [Bacillus licheniformis ATCC 14580] gi|317392935|gb|EFV73729.1| ribonuclease Z [Bacillus sp. BT1B_CT2] Length = 307 Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 38/193 (19%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R +S+ + + ER + + D G Q+L + I+ + TH H DH++ Sbjct: 13 PAKTRNVTSVALKLLEER--RSVWLFDCGEATQHQILHTSIKPRKIEKIFITHLHGDHVY 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD----DRTYPPIVNPI--- 141 G+ GL F + P+ VY P +K E+ ALD TYP ++ I Sbjct: 71 GLPGLVSSRSFQGGEGPLTVY-GPQGIKTFLET------ALDVSGTHVTYPLVIKEIGEG 123 Query: 142 -VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV-NAFPAESLEKLQ 199 V E++ + +S HG I + G+R DV A AE+L+++ Sbjct: 124 TVFEDDQFIVTARSV-----------SHG-IPAFGYRVQE----KDVPGALDAEALKEIG 167 Query: 200 NLDFLIIDALKNG 212 + LKNG Sbjct: 168 VSPGPVYQKLKNG 180 >gi|296393531|ref|YP_003658415.1| beta-lactamase [Segniliparus rotundus DSM 44985] gi|296180678|gb|ADG97584.1| beta-lactamase [Segniliparus rotundus DSM 44985] Length = 291 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDV 108 G+ V+VD GPD V R L + AVL TH HADH+ + LR R P+ + Sbjct: 47 GARECVVVDPGPDAADHVRRIAALGPVAAVLLTHHHADHVRALPALRRRLAASGREPVVL 106 Query: 109 YAAPDCMKHLFESFRY 124 P + R+ Sbjct: 107 AVNPTMVAKSQSPLRF 122 >gi|315172396|gb|EFU16413.1| ribonuclease Z [Enterococcus faecalis TX1346] Length = 313 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGVADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|261330372|emb|CBH13356.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 367 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 56 VIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +++D G F L+ V AVL TH HAD +GID LR F ++ PI VYA Sbjct: 78 ILIDCGKTFRESALKVFPSFLVRDFSAVLLTHDHADASYGIDDLR-EFSRKDVPIGVYAD 136 Query: 112 PDCMKHLFESFRYCF 126 + + + Y F Sbjct: 137 ETTLAAMRRVYPYLF 151 >gi|256965002|ref|ZP_05569173.1| ribonuclease Z [Enterococcus faecalis HIP11704] gi|307273098|ref|ZP_07554344.1| ribonuclease Z [Enterococcus faecalis TX0855] gi|256955498|gb|EEU72130.1| ribonuclease Z [Enterococcus faecalis HIP11704] gi|306510083|gb|EFM79107.1| ribonuclease Z [Enterococcus faecalis TX0855] Length = 313 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGVADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|119944272|ref|YP_941952.1| hydroxyacylglutathione hydrolase [Psychromonas ingrahamii 37] gi|226724011|sp|A1SS88|GLO2_PSYIN RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|119862876|gb|ABM02353.1| Hydroxyacylglutathione hydrolase [Psychromonas ingrahamii 37] Length = 256 Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 44 ISRVSERGSNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I + + S +IVD G + +L +Q L +DA+L TH H DHI G+D L + Sbjct: 15 IWLIKDSQSQHCIIVDPGDAAPVLTILEDQKLIVDAILLTHHHYDHIGGVDALLS---AR 71 Query: 103 KRPIDVYAAPDCMKHLFESFR 123 I +Y+ K LF+ R Sbjct: 72 DEKISIYSK----KKLFDRCR 88 >gi|325914169|ref|ZP_08176522.1| coenzyme PQQ biosynthesis protein B [Xanthomonas vesicatoria ATCC 35937] gi|325539672|gb|EGD11315.1| coenzyme PQQ biosynthesis protein B [Xanthomonas vesicatoria ATCC 35937] Length = 299 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 25/105 (23%) Query: 9 ILGCGASLGVPRITGDWGACDP--------TNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ W P T+ RRT++S+ +S ER V+++ Sbjct: 5 VLGSAAGGGHPQ----WNCHTPASLRAWHQTDGAQRRTQASIAVSADGER----WVLINA 56 Query: 61 GPDFYMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 PDF Q+L L I+AVL T DHI G+ +R Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR 101 >gi|75759266|ref|ZP_00739366.1| Ribonuclease Z [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493272|gb|EAO56388.1| Ribonuclease Z [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 318 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 11/101 (10%) Query: 24 DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLY 81 +W C R+ R S + + ERG T + D G Q+L V I+ + Sbjct: 19 NWCRCSF----KRKERFSNALQLLEERGQ--TWLFDCGEATQHQILHTSVRPRRIEKIFI 72 Query: 82 THPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 TH H DHI G+ GL G F P+ VY P +K E Sbjct: 73 THLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIKQFIE 112 >gi|229545696|ref|ZP_04434421.1| ribonuclease Z [Enterococcus faecalis TX1322] gi|256619186|ref|ZP_05476032.1| ribonuclease Z [Enterococcus faecalis ATCC 4200] gi|256762622|ref|ZP_05503202.1| ribonuclease Z [Enterococcus faecalis T3] gi|256853248|ref|ZP_05558618.1| ribonuclease Z [Enterococcus faecalis T8] gi|256959102|ref|ZP_05563273.1| ribonuclease Z [Enterococcus faecalis DS5] gi|257079133|ref|ZP_05573494.1| ribonuclease Z [Enterococcus faecalis JH1] gi|257082430|ref|ZP_05576791.1| ribonuclease Z [Enterococcus faecalis E1Sol] gi|257085062|ref|ZP_05579423.1| ribonuclease Z [Enterococcus faecalis Fly1] gi|257086979|ref|ZP_05581340.1| ribonuclease Z [Enterococcus faecalis D6] gi|257422490|ref|ZP_05599480.1| ribonuclease Z [Enterococcus faecalis X98] gi|294781596|ref|ZP_06746932.1| ribonuclease Z [Enterococcus faecalis PC1.1] gi|300861042|ref|ZP_07107129.1| ribonuclease Z [Enterococcus faecalis TUSoD Ef11] gi|307269504|ref|ZP_07550843.1| ribonuclease Z [Enterococcus faecalis TX4248] gi|307275847|ref|ZP_07556986.1| ribonuclease Z [Enterococcus faecalis TX2134] gi|307289231|ref|ZP_07569187.1| ribonuclease Z [Enterococcus faecalis TX0109] gi|307291870|ref|ZP_07571741.1| ribonuclease Z [Enterococcus faecalis TX0411] gi|312901904|ref|ZP_07761168.1| ribonuclease Z [Enterococcus faecalis TX0470] gi|229309146|gb|EEN75133.1| ribonuclease Z [Enterococcus faecalis TX1322] gi|256598713|gb|EEU17889.1| ribonuclease Z [Enterococcus faecalis ATCC 4200] gi|256683873|gb|EEU23568.1| ribonuclease Z [Enterococcus faecalis T3] gi|256711707|gb|EEU26745.1| ribonuclease Z [Enterococcus faecalis T8] gi|256949598|gb|EEU66230.1| ribonuclease Z [Enterococcus faecalis DS5] gi|256987163|gb|EEU74465.1| ribonuclease Z [Enterococcus faecalis JH1] gi|256990460|gb|EEU77762.1| ribonuclease Z [Enterococcus faecalis E1Sol] gi|256993092|gb|EEU80394.1| ribonuclease Z [Enterococcus faecalis Fly1] gi|256995009|gb|EEU82311.1| ribonuclease Z [Enterococcus faecalis D6] gi|257164314|gb|EEU94274.1| ribonuclease Z [Enterococcus faecalis X98] gi|294451292|gb|EFG19758.1| ribonuclease Z [Enterococcus faecalis PC1.1] gi|300850081|gb|EFK77831.1| ribonuclease Z [Enterococcus faecalis TUSoD Ef11] gi|306497136|gb|EFM66682.1| ribonuclease Z [Enterococcus faecalis TX0411] gi|306499940|gb|EFM69301.1| ribonuclease Z [Enterococcus faecalis TX0109] gi|306507539|gb|EFM76670.1| ribonuclease Z [Enterococcus faecalis TX2134] gi|306514124|gb|EFM82700.1| ribonuclease Z [Enterococcus faecalis TX4248] gi|311291016|gb|EFQ69572.1| ribonuclease Z [Enterococcus faecalis TX0470] gi|315027849|gb|EFT39781.1| ribonuclease Z [Enterococcus faecalis TX2137] gi|315029258|gb|EFT41190.1| ribonuclease Z [Enterococcus faecalis TX4000] gi|315031944|gb|EFT43876.1| ribonuclease Z [Enterococcus faecalis TX0017] gi|315037105|gb|EFT49037.1| ribonuclease Z [Enterococcus faecalis TX0027] gi|315145042|gb|EFT89058.1| ribonuclease Z [Enterococcus faecalis TX2141] gi|315156157|gb|EFU00174.1| ribonuclease Z [Enterococcus faecalis TX0043] gi|315162328|gb|EFU06345.1| ribonuclease Z [Enterococcus faecalis TX0645] gi|315164140|gb|EFU08157.1| ribonuclease Z [Enterococcus faecalis TX1302] gi|329571914|gb|EGG53592.1| ribonuclease Z [Enterococcus faecalis TX1467] Length = 313 Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGVADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|323143630|ref|ZP_08078304.1| hypothetical protein HMPREF9444_00933 [Succinatimonas hippei YIT 12066] gi|322416563|gb|EFY07223.1| hypothetical protein HMPREF9444_00933 [Succinatimonas hippei YIT 12066] Length = 272 Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +G AS G+P + C N RTR+S + + +++D P++ Sbjct: 5 FMGTAASEGIPNPFCNCKVCTYAREHGGANVRTRASAMV--------DNHILIDMSPEWS 56 Query: 66 MQVLREQVLS--IDAVLYTHPHADHI 89 Q+ RE + + ID VL+TH H DH Sbjct: 57 AQLKRENMTAREIDTVLFTHTHPDHF 82 >gi|300727341|ref|ZP_07060755.1| metallo-beta-lactamase family protein [Prevotella bryantii B14] gi|299775385|gb|EFI71981.1| metallo-beta-lactamase family protein [Prevotella bryantii B14] Length = 288 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 13/105 (12%) Query: 25 WGACDPTNPKNRR--TRSSLKISRVSERGSNTTVIVDTGP-DFYMQ---VLREQVLSIDA 78 W + R T L I +ER +++DTG D ++Q +L + +D Sbjct: 3 WTVLSDNRSSDSRLSTEHGLSILLETER---HKILLDTGASDVFIQNAELLGVNLSDVDY 59 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 V +H H+DH GLR YFL+ R V +PD M +F S R Sbjct: 60 VFISHGHSDHA---GGLR-YFLEHNRQAQVIVSPDAMSGMFFSKR 100 >gi|41406495|ref|NP_959331.1| hypothetical protein MAP0397 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394844|gb|AAS02714.1| hypothetical protein MAP_0397 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 267 Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRG 97 RGS+ VIVD GPD + R L I VL +H H DH GID L G Sbjct: 47 RGSDELVIVDPGPDDDEHIARIAALGRIALVLISHRHGDHTDGIDKLVG 95 >gi|21221026|ref|NP_626805.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|6714673|emb|CAB66245.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] Length = 855 Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VDTGPD + LR + + VL TH HADH+ G+ G LRG Sbjct: 617 GEGTGVVVDTGPDPALVDHCLRALGITRVPLVLLTHFHADHVAGLPGVLRG 667 >gi|120537051|ref|YP_957108.1| beta-lactamase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326886|gb|ABM21193.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 283 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF---LKQKRPIDV 108 ++ +++D GPD Y V + L DA+ TH H DH+ G++ R +F K++R I + Sbjct: 29 NSQNMLIDFGPDTYFSV-NTRKLQFDAIFITHAHLDHVGGLE--RLFFSVAFKKQRLIKL 85 Query: 109 YAAPDCMKHLFESF 122 Y + L + F Sbjct: 86 YVPVSLVTRLHQIF 99 >gi|313200387|ref|YP_004039045.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|312439703|gb|ADQ83809.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 255 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 42/201 (20%) Query: 71 EQVLSIDAVLYTHPHADHIH-------GIDGLRGYFLKQKRPIDVYAAPDCM----KHLF 119 EQ+ ID V TH H DHI + GLR + P+ +YA P+ + H+F Sbjct: 41 EQMARIDHVFLTHSHLDHIACLPLMLDTVAGLR------EAPVTIYALPETLHALKTHIF 94 Query: 120 ESFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F A+ T P + V + V + +S I L + + ++G+ Sbjct: 95 NWIIWPDFSAVPSETSPLLRYAEVAQGKAVSLSGRS-------ITPLPANHTVPAVGYWL 147 Query: 179 ----GNVAYCTDVNAFPA--ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKI----- 227 ++ + D A E + +++NL +L+I+ + + +L+++ K + Sbjct: 148 DSGANSMVFTGDTTTCDALWEQVNQIENLKYLLIE---TAFGNENLALAQASKHLSPILL 204 Query: 228 --ELINPKNAILTHM-HVDLD 245 EL+ K +LT++ H+ D Sbjct: 205 IDELMKLKQQVLTYITHIKAD 225 >gi|291527053|emb|CBK92639.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale M104/1] Length = 267 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 28/140 (20%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA---LDDR 132 + +L TH H DHI G+ + ++ I +YA + + C K+ +DD Sbjct: 50 MQGILVTHEHIDHIAGLG-----VMARRYHIPIYATKATIGAI-----KCTKSVGNIDDE 99 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 + P+ + D I G IE P+ H + +RF N +A TD+ Sbjct: 100 LFHPVEAGV-----DFTI------GDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLG 148 Query: 189 AFPAESLEKLQNLDFLIIDA 208 + + KLQNLD L+++A Sbjct: 149 TYDDALVSKLQNLDGLLLEA 168 >gi|196248795|ref|ZP_03147495.1| ribonuclease Z [Geobacillus sp. G11MC16] gi|196211671|gb|EDY06430.1| ribonuclease Z [Geobacillus sp. G11MC16] Length = 306 Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DH+ Sbjct: 13 PAKERNVSSIALQLLEERGA--TWLFDCGEATQHQILHTAIRPRRIEHIFITHLHGDHLF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ V+ P ++ E+ Sbjct: 71 GLPGLLGSRSFQSGETPLTVF-GPKGIRQFVET 102 >gi|138895904|ref|YP_001126357.1| ribonuclease Z [Geobacillus thermodenitrificans NG80-2] gi|134267417|gb|ABO67612.1| Metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 308 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DH+ Sbjct: 15 PAKERNVSSIALQLLEERGA--TWLFDCGEATQHQILHTAIRPRRIEHIFITHLHGDHLF 72 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ V+ P ++ E+ Sbjct: 73 GLPGLLGSRSFQSGETPLTVF-GPKGIRQFVET 104 >gi|307152999|ref|YP_003888383.1| ribonuclease Z [Cyanothece sp. PCC 7822] gi|306983227|gb|ADN15108.1| ribonuclease Z [Cyanothece sp. PCC 7822] Length = 332 Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIH 90 P R SS+ + R+ +RG + D G Q+LR ++ + + + TH H DHI Sbjct: 27 PTRSRNVSSVAL-RLPQRGE--VWLFDCGEGTQHQLLRSEIKTSQLRRIFITHLHGDHIF 83 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 G+ GL +P+D+Y ++ +Y + +R V P V+ ++ Sbjct: 84 GLMGLLASCGLAGTAQPVDLYGPTGLKDYIQACSKYSYTHFGNRVQVHTVQPGVVYEDE 142 >gi|156937204|ref|YP_001435000.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566188|gb|ABU81593.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 312 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 18/100 (18%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVL 80 DP + + +S L + G V+V+TGP +VL++ + S +DAVL Sbjct: 24 ADPVSKRENYIKSYLIV------GPEARVLVETGPRNAFEVLKDSLESKGFSLRELDAVL 77 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 TH H DH G+ G LK+ Y P ++HL + Sbjct: 78 LTHIHLDHAGGL----GEVLKECN-CKAYVHPKGLRHLVD 112 >gi|260887690|ref|ZP_05898953.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|260862570|gb|EEX77070.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] Length = 306 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 R ++ T+ +DTG P + +E + ++D ++ THPHADH+ G Sbjct: 62 RTADQTIFIDTGDLDEHPKLEAALKKENIKTVDKLIITHPHADHLGG 108 >gi|156364690|ref|XP_001626479.1| predicted protein [Nematostella vectensis] gi|156213356|gb|EDO34379.1| predicted protein [Nematostella vectensis] Length = 536 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 R+ K + +E + T+ ++T FY+Q+L+E ++ D L H + H+ +D Sbjct: 64 RQKARDKKCTSKNEVQAVLTLFLETASGFYIQLLQELCMTYDLDLPGHARSSHLGLLDD- 122 Query: 96 RGYFLKQKRPID---VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 KRP Y DC+ HL + RYC DD T + + + + Sbjct: 123 GDVNSSSKRPHTQSCYYVCQDCLVHLGDIARYC----DDATQAEVFYRHAL------VLV 172 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDV---NAFPAES 194 S G + IL S+ G G V YC + N FPA S Sbjct: 173 PSNGQPYNQLAIL-----ASARGDHLGTVYFYCRSIAVKNQFPAAS 213 >gi|261880520|ref|ZP_06006947.1| ribonuclease Z [Prevotella bergensis DSM 17361] gi|270332743|gb|EFA43529.1| ribonuclease Z [Prevotella bergensis DSM 17361] Length = 304 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L P R + SS V RG ++D G MQ+ Sbjct: 8 ILGCGSAL----------------PTLRHSASS---QVVEIRGK--FFMIDCGEGTQMQL 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFRY 124 R V I A+L +H H DH G+ GL F L + P+ +Y AP ++ + +S Sbjct: 47 RRTHVGFTKIQAILISHLHGDHCFGLIGLISTFGMLGRTAPLHIY-APKSLEPMLDSMVQ 105 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F + Y + ++ + + + IEAIP+ +H RI G+ F Sbjct: 106 MF--CPNLEYSITFH--AVDTSQQSVIYEDRSMTIEAIPL--EH-RIPCCGYLF 152 >gi|257875792|ref|ZP_05655445.1| ribonuclease Z [Enterococcus casseliflavus EC20] gi|257809958|gb|EEV38778.1| ribonuclease Z [Enterococcus casseliflavus EC20] Length = 318 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +SL + + ER N + D G MQ+L + I+ + TH H DHI+ Sbjct: 13 PAKHRNVTSLALRLLDER--NAVWLFDCGEGTQMQILHSTIRPRKIEKIFITHLHGDHIY 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGDTPLEIYG 92 >gi|153814486|ref|ZP_01967154.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|317500529|ref|ZP_07958751.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331089372|ref|ZP_08338272.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847980|gb|EDK24898.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|316898039|gb|EFV20088.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330405435|gb|EGG84970.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] Length = 265 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T ++VDTG + ++ L + +D +L TH H+DHI G+ G F +K I Sbjct: 21 DTHLLVDTGISKKRIEEGLKTLELKGEDLDGILITHEHSDHIQGL----GVF-SRKYEIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA P + + +S+ K + + Y I D P + G + P Sbjct: 76 IYATPGTIMGI-KSYSGLGK-MPEGLYREI-------RADEPFEL----GDMTVKPFAIS 122 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R +VA TD+ + + ++E L+NLD ++++A Sbjct: 123 HDANEPSGYRLEQGGKSVAVATDLGKYDSYTVECLRNLDAVLLEA 167 >gi|257416213|ref|ZP_05593207.1| ribonuclease Z [Enterococcus faecalis AR01/DG] gi|257158041|gb|EEU88001.1| ribonuclease Z [Enterococcus faecalis ARO1/DG] Length = 313 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGIADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|299821603|ref|ZP_07053491.1| ribonuclease Z [Listeria grayi DSM 20601] gi|299817268|gb|EFI84504.1| ribonuclease Z [Listeria grayi DSM 20601] Length = 343 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R +S+ +S + ER S + D G Q+L+ ++ ++ + TH H DHI Sbjct: 52 PSKSRNVTSIALSLLDERKS--IWLFDCGEATQHQILKSTIKLSKLEKIFITHMHGDHIF 109 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFR 123 G+ GL F +++PI +Y +++ + R Sbjct: 110 GLPGLLSSRSFQGKEKPITIYGPKGIQEYVESALR 144 >gi|29376245|ref|NP_815399.1| AtsA/ElaC family beta-lactamase [Enterococcus faecalis V583] gi|227518882|ref|ZP_03948931.1| ribonuclease Z [Enterococcus faecalis TX0104] gi|227553497|ref|ZP_03983546.1| ribonuclease Z [Enterococcus faecalis HH22] gi|255975723|ref|ZP_05426309.1| ribonuclease Z [Enterococcus faecalis T2] gi|256961805|ref|ZP_05565976.1| ribonuclease Z [Enterococcus faecalis Merz96] gi|257090007|ref|ZP_05584368.1| ribonuclease Z [Enterococcus faecalis CH188] gi|257419418|ref|ZP_05596412.1| ribonuclease Z [Enterococcus faecalis T11] gi|293382868|ref|ZP_06628786.1| ribonuclease Z [Enterococcus faecalis R712] gi|293389645|ref|ZP_06634100.1| ribonuclease Z [Enterococcus faecalis S613] gi|307277941|ref|ZP_07559025.1| ribonuclease Z [Enterococcus faecalis TX0860] gi|312903441|ref|ZP_07762621.1| ribonuclease Z [Enterococcus faecalis TX0635] gi|312907661|ref|ZP_07766652.1| ribonuclease Z [Enterococcus faecalis DAPTO 512] gi|312910278|ref|ZP_07769125.1| ribonuclease Z [Enterococcus faecalis DAPTO 516] gi|41017546|sp|Q834G2|RNZ_ENTFA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29343708|gb|AAO81469.1| metallo-beta-lactamase, AtsA/ElaC family [Enterococcus faecalis V583] gi|227073673|gb|EEI11636.1| ribonuclease Z [Enterococcus faecalis TX0104] gi|227177367|gb|EEI58339.1| ribonuclease Z [Enterococcus faecalis HH22] gi|255968595|gb|EET99217.1| ribonuclease Z [Enterococcus faecalis T2] gi|256952301|gb|EEU68933.1| ribonuclease Z [Enterococcus faecalis Merz96] gi|256998819|gb|EEU85339.1| ribonuclease Z [Enterococcus faecalis CH188] gi|257161246|gb|EEU91206.1| ribonuclease Z [Enterococcus faecalis T11] gi|291079533|gb|EFE16897.1| ribonuclease Z [Enterococcus faecalis R712] gi|291081038|gb|EFE18001.1| ribonuclease Z [Enterococcus faecalis S613] gi|295113079|emb|CBL31716.1| RNAse Z [Enterococcus sp. 7L76] gi|306505338|gb|EFM74524.1| ribonuclease Z [Enterococcus faecalis TX0860] gi|310626689|gb|EFQ09972.1| ribonuclease Z [Enterococcus faecalis DAPTO 512] gi|310633317|gb|EFQ16600.1| ribonuclease Z [Enterococcus faecalis TX0635] gi|311289551|gb|EFQ68107.1| ribonuclease Z [Enterococcus faecalis DAPTO 516] gi|315147387|gb|EFT91403.1| ribonuclease Z [Enterococcus faecalis TX4244] gi|315150410|gb|EFT94426.1| ribonuclease Z [Enterococcus faecalis TX0012] gi|315169856|gb|EFU13873.1| ribonuclease Z [Enterococcus faecalis TX1342] gi|315576098|gb|EFU88289.1| ribonuclease Z [Enterococcus faecalis TX0309B] gi|315577751|gb|EFU89942.1| ribonuclease Z [Enterococcus faecalis TX0630] gi|315580672|gb|EFU92863.1| ribonuclease Z [Enterococcus faecalis TX0309A] gi|327535257|gb|AEA94091.1| ribonuclease Z [Enterococcus faecalis OG1RF] Length = 313 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGIADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|239827626|ref|YP_002950250.1| ribonuclease Z [Geobacillus sp. WCH70] gi|259494136|sp|C5D428|RNZ_GEOSW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|239807919|gb|ACS24984.1| ribonuclease Z [Geobacillus sp. WCH70] Length = 308 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DHI Sbjct: 13 PAKERNVSSIALQLLEERGA--TWLFDCGEATQHQILHTSIRPRRIENIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 G+ GL G F P+ +Y P ++ E Sbjct: 71 GLPGLLGSRSFQGGDTPLTIY-GPKGIQAFIE 101 >gi|57640223|ref|YP_182701.1| phosphonate matabolism protein PhnP-like protein [Thermococcus kodakarensis KOD1] gi|57158547|dbj|BAD84477.1| phosphonate matabolism protein PhnP homolog, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 249 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 45/272 (16%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF--YMQ 67 +G G S G+P +C+ R ++ V+E + TV+ D G D ++ Sbjct: 6 IGTGGSEGIPAHLCTCSSCNEARKFGFAQRRPSTLAVVTE--NRKTVLFDVGTDIRDFLN 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 V ++A+ TH H DHI+G+ LR ++ ++YA L + K Sbjct: 64 V------PLEAIFLTHWHHDHIYGLYKLRWMAMET----ELYAPEGQADALILNEP---K 110 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAY 183 L +T P+ + I I+ I L+ + ++ +LG+ + A Sbjct: 111 NLKPKTLKPM-DRIKIDT--------------LKITALKLNHQVETLGYLIEEDGKSFAL 155 Query: 184 CTDVNAFPAESLEKLQN---LDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P E+ + L+ L +++DA G + + + + +I L + +L+H Sbjct: 156 LYDTKGLPEETWQVLRKKAPLRGVVVDATYPPGFNDPYHNNVDEAAEIGLQLAERTVLSH 215 Query: 240 M-HVDLDY----DMVLKSTPSRVVPAFDGMQF 266 + H +L + + V K ++V+ A+DGM F Sbjct: 216 ISHKNLPFLELVEYVRKRWGNKVLVAYDGMVF 247 >gi|330838637|ref|YP_004413217.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|329746401|gb|AEB99757.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 299 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 R ++ T+ +DTG P + +E + ++D ++ THPHADH+ G Sbjct: 55 RTADQTIFIDTGDLDEHPKLEAALKKENIKTVDKLIITHPHADHLGG 101 >gi|229549887|ref|ZP_04438612.1| ribonuclease Z [Enterococcus faecalis ATCC 29200] gi|255972671|ref|ZP_05423257.1| ribonuclease Z [Enterococcus faecalis T1] gi|312951623|ref|ZP_07770518.1| ribonuclease Z [Enterococcus faecalis TX0102] gi|229304960|gb|EEN70956.1| ribonuclease Z [Enterococcus faecalis ATCC 29200] gi|255963689|gb|EET96165.1| ribonuclease Z [Enterococcus faecalis T1] gi|310630340|gb|EFQ13623.1| ribonuclease Z [Enterococcus faecalis TX0102] gi|315152356|gb|EFT96372.1| ribonuclease Z [Enterococcus faecalis TX0031] gi|315158201|gb|EFU02218.1| ribonuclease Z [Enterococcus faecalis TX0312] gi|315168909|gb|EFU12926.1| ribonuclease Z [Enterococcus faecalis TX1341] gi|323480852|gb|ADX80291.1| ribonuclease Z [Enterococcus faecalis 62] Length = 313 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R + + + + ER N + D G +Q+L+ + I+ + TH H DHI Sbjct: 13 PAKHRNVTGIALKLLDER--NAVWLFDCGEGTQLQILKSSIRPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL F P+++Y + S R L +YP + EN+ Sbjct: 71 GLPGLLSSRSFQGGTEPLEIYGPVGIADFVKTSLRVSQSRL---SYPLKFIELTKEND-- 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 + K + IL HG I+S G+R A+ ++ +EKLQ L Sbjct: 126 -VIFKDKQFTVRC-NIL-DHG-ITSFGYRIEEAAHEGELQ------VEKLQAL 168 >gi|257866158|ref|ZP_05645811.1| ribonuclease Z [Enterococcus casseliflavus EC30] gi|257872488|ref|ZP_05652141.1| ribonuclease Z [Enterococcus casseliflavus EC10] gi|257800092|gb|EEV29144.1| ribonuclease Z [Enterococcus casseliflavus EC30] gi|257806652|gb|EEV35474.1| ribonuclease Z [Enterococcus casseliflavus EC10] Length = 318 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+L + I+ + TH H DHI+ Sbjct: 13 PAKHRNVTSIALRLLDER--NAVWLFDCGEGTQMQILHSTIRPRKIEKIFITHLHGDHIY 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F PI++Y Sbjct: 71 GLPGLISSRSFQGGDTPIEIYG 92 >gi|296876107|ref|ZP_06900161.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] gi|296432818|gb|EFH18611.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] Length = 285 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 35/124 (28%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVD--TGPDFYMQVLREQVL-------------- 74 T + R+ + S+ +E+G +++ +G FY++ ++++L Sbjct: 6 TGIQKRKNKESM-----TEKGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLL 60 Query: 75 --------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 +DA+L TH H+DHIHG+ L +K +D+YA K + E +Y Sbjct: 61 AEIDRKPEDLDAILITHEHSDHIHGVG-----VLARKYGMDLYANEATWKAM-EGTKYLG 114 Query: 127 KALD 130 K D Sbjct: 115 KVDD 118 >gi|261350457|ref|ZP_05975874.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288861240|gb|EFC93538.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 306 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 50/217 (23%), Positives = 81/217 (37%), Gaps = 44/217 (20%) Query: 75 SIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKRPIDVYA--APDCMK-HLFE 120 ++D V +H H DH G+ G L K +D Y P K H Sbjct: 56 NLDGVFVSHAHTDHYNDAEILIEAMTRGMTKEYGVVLGNKSVLDGYERWGPGISKYHQSH 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S +Y ++ P +EN + C + P G + +R Sbjct: 116 SKKY------------VLEPNQVEN--INGCSVKGTKTVHGDP----EGVGFQIDYRGFK 157 Query: 181 VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS--SHFSLSESLKKIELINPKNAIL 237 ++Y +D F E L K + D LI L+ G S H ++ ++ + PK AI+ Sbjct: 158 ISYTSDTGYF--EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVKPKLAIM 215 Query: 238 THMHVDL-------DYDMVLKSTPSRVVPAFDGMQFS 267 TH + + + + K + + + AFDGM F Sbjct: 216 THFGLKMLSIDPIDEAKRITKESGVKTLAAFDGMSFE 252 >gi|126179500|ref|YP_001047465.1| ribonuclease Z [Methanoculleus marisnigri JR1] gi|125862294|gb|ABN57483.1| RNAse Z [Methanoculleus marisnigri JR1] Length = 317 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 8/83 (9%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHG 91 P +R S L I R S+ T++ D G Q++R + +++AV TH HADH G Sbjct: 21 PSPQRNPSCLLIRRGSD-----TLLFDCGEGAQQQMMRARTGFTVNAVFITHWHADHFLG 75 Query: 92 IDGLRGY--FLKQKRPIDVYAAP 112 + GL F+ + P+ +Y P Sbjct: 76 VFGLVETLAFMGRTDPLPIYGPP 98 >gi|315231189|ref|YP_004071625.1| metal-dependent hydrolase [Thermococcus barophilus MP] gi|315184217|gb|ADT84402.1| metal-dependent hydrolase [Thermococcus barophilus MP] Length = 251 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 55/252 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG G+ G P+ C P++RRTR S+ I + ++D PD + Sbjct: 5 VLGSGSYSGTPKPLCSCENCVRARKYPQHRRTRFSVFIPEIK-------ALIDPSPDLHY 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA---APDCMKHLFESF- 122 L + + V TH H DHI G+ L+ + + + Y+ A + KHL E F Sbjct: 58 H-LEHLNMDVKRVFITHAHFDHIAGLPELQIF-----KGVKFYSHEYAVNTAKHLQELFL 111 Query: 123 -------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 R+ +P I PI K+AGG + I I ++ Sbjct: 112 GERDWEYIPLEFNRWYDFGFRVYHFPTIHQPI-----------KAAGGFV--IEIGKK-- 156 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIE 228 +I+ G + D NA +E ++ D LI + K+ + +H + +++K + Sbjct: 157 KIAITGDTGPEI--LGDENA-----IEIMKGSDLLIAEMTKKHSVPKTHLGVEDAIKLAQ 209 Query: 229 LINPKNAILTHM 240 + K + H+ Sbjct: 210 KVEAKKTVFAHI 221 >gi|152976548|ref|YP_001376065.1| ribonuclease Z [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189043779|sp|A7GSG2|RNZ_BACCN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|152025300|gb|ABS23070.1| ribonuclease Z [Bacillus cytotoxicus NVH 391-98] Length = 307 Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG GA + P R S++ + + ERG T + D G Sbjct: 3 FVFLGTGAGV----------------PSKGRNVSAIALQLLEERGG--TWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F P+ VY P ++ E Sbjct: 45 QILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVY-GPKGIEQFIE 101 >gi|168204952|ref|ZP_02630957.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|168211508|ref|ZP_02637133.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170663469|gb|EDT16152.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|170710531|gb|EDT22713.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] Length = 280 Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust. Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 46/292 (15%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPD 63 F I+G G + +P+ + C K + R SL + ++ ++VDT D Sbjct: 3 FIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFLDDIN-------LLVDTPED 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAPDC 114 + + ID VL++H DH G+ + LR +L+ + PI+V+A Sbjct: 56 INYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEASCGKNCENPIEVFALEGV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 +K + S + F + D Y + N I ++ + I +K I+ I H + Sbjct: 116 IKDI-NSIGFKFGSYLD-YYENVRNLIKRKSVEDYISIKD----IKVSFIKVNHATVFVF 169 Query: 175 GFRFGNVAYC-TDVNAFPAESLEKLQNLDFLII------DALKNG--------LHSSHFS 219 + Y DV FP L + D LII + LK+G L F+ Sbjct: 170 EKEGKKLIYAPCDVKPFPESKL--FLDADCLIIGNIIVGEVLKDGFILKEDNPLRDELFT 227 Query: 220 LSESLKKIELINPKNAILTHMHVDL--DYD--MVLKSTPSRVVPAFDGMQFS 267 +S+ + N K I+TH+ D YD + L+ + A+DGM+ Sbjct: 228 ISDIEELKNKYNIKRVIITHLEEDWGKSYDDYVELEKELDGIEFAYDGMKIE 279 >gi|294501160|ref|YP_003564860.1| ribonuclease Z [Bacillus megaterium QM B1551] gi|294351097|gb|ADE71426.1| ribonuclease Z [Bacillus megaterium QM B1551] Length = 309 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P +R SSL + + ERG+ + D G Q+L V I+ + TH H DHI+ Sbjct: 13 PAKQRNVSSLALELLQERGA--VWLFDCGEATQHQILHTTVKPRRIEKIFITHLHGDHIY 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 G+ G G F + + VY P +K E Sbjct: 71 GLPGFLGSRSFQGGESLLTVY-GPKGIKEFIE 101 >gi|121594111|ref|YP_986007.1| hydroxyacylglutathione hydrolase [Acidovorax sp. JS42] gi|120606191|gb|ABM41931.1| Hydroxyacylglutathione hydrolase [Acidovorax sp. JS42] Length = 259 Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+VD G + +Q LR L ++A+L TH H DH+ G++ LR Sbjct: 21 AQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVGGVNALR 66 >gi|258616316|ref|ZP_05714086.1| AtsA/ElaC family beta-lactamase [Enterococcus faecium DO] Length = 117 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+LR + I + TH H DHI Sbjct: 13 PAKHRNVTSIALKLLDER--NEVWLFDCGEGTQMQILRTTIRPRKIGKIFITHLHGDHIF 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGDTPLEIYG 92 >gi|157150207|ref|YP_001450080.1| zinc-dependent hydrolase [Streptococcus gordonii str. Challis substr. CH1] gi|262282635|ref|ZP_06060403.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] gi|157075001|gb|ABV09684.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus gordonii str. Challis substr. CH1] gi|262261926|gb|EEY80624.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] Length = 267 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA D K + Sbjct: 54 LDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEDTWKAM 91 >gi|315644221|ref|ZP_07897391.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315280596|gb|EFU43885.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 267 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ + ID +L TH H+DHI G+ + +K Sbjct: 20 RNEDTTLLIDAGLSARRIDELLKEREMMGEEIDGILVTHEHSDHIRGLGA-----VARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + +S + N IV+E+++V G + P Sbjct: 75 NLPIYANEKTWEAMTKSLGKIAEE----------NRIVLESHEVKDF-----GTLRVEPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H + +G+ F + TD+ + + L D L+++A Sbjct: 120 EISHDAAAPVGYCFYDGDEKLGVATDLGYVSDKVKKALDGSDVLVLEANHDIEMLRMGRY 179 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 L + H S+ S ++L ++ + K L H+ +D Sbjct: 180 PWNTKRRILGDMGHLSNISAGDALSELLTGDTKRTYLAHLSLD 222 >gi|303237057|ref|ZP_07323627.1| ribonuclease Z [Prevotella disiens FB035-09AN] gi|302482444|gb|EFL45469.1| ribonuclease Z [Prevotella disiens FB035-09AN] Length = 305 Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT R ++ +I V RG ++D G +Q+ Sbjct: 8 ILGCGSAL-------------PT----LRHNATCQIVEV--RGK--LFMIDCGEGTQIQI 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ + AV +H H DH G+ G+ F R P+ VYA + ++ S Sbjct: 47 RRSRIHFSKVQAVFISHLHGDHCFGLMGMLSTFGMTGRTNPLHVYAPKEFEQYFNLSMEL 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 K L+ + V E + + + IE++P+ +H RI GF F Sbjct: 107 FCKGLEYEVFFHCV-----ETTENKVIYEDKSITIESVPL--EH-RIPCCGFLF 152 >gi|126649441|ref|ZP_01721682.1| Competence-like protein [Bacillus sp. B14905] gi|126593766|gb|EAZ87689.1| Competence-like protein [Bacillus sp. B14905] Length = 395 Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 30/176 (17%) Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK-HLFESFRYCFKALDD 131 V +D V+ THP ADHI G+ + Q PI+ + D K H ++F A+D+ Sbjct: 79 VNKLDRVVATHPDADHIGGL-----IPVLQAIPIEQFY--DSGKVHTSQTFEEMLMAIDE 131 Query: 132 RTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS-----LGFRFGNVAY 183 + P P ++ + DV + + +A +H ++ L +GNV++ Sbjct: 132 KNIPYYVPKTGDLIEFDKDVTVKVLNA----------NEHATDNNDASIVLKVVYGNVSF 181 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +A A E +QN I LK G H S+ S SE I + P+ IL++ Sbjct: 182 LLTGDAGIALEKEMMQNDVTATI--LKAGHHGSNTSSSEEF--IRAVKPEVTILSY 233 >gi|289434209|ref|YP_003464081.1| beta-lactamase domain lipoprotein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170453|emb|CBH26993.1| beta-lactamase domain lipoprotein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 376 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Query: 48 SERGSNTTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 SE G TT+++DTG D + L+E +V ID +L THPHADHI D + Sbjct: 56 SEDG--TTILIDTGRQDDDRILTYLKEAKVKKIDLLLLTHPHADHIGNADKI 105 >gi|116872341|ref|YP_849122.1| putative secreted lipoprotein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741219|emb|CAK20341.1| putative secreted lipoprotein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 376 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TTV++DTG D + L+E ++ ID +L THPHADHI D Sbjct: 60 TTVLIDTGRQDDDRILSYLKEAKIKKIDLLLLTHPHADHIGNAD 103 >gi|225568637|ref|ZP_03777662.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] gi|225162565|gb|EEG75184.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] Length = 211 Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 5/57 (8%) Query: 47 VSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V+E T VI P + M ++ + L I+AVL TH H DHI G+DG FLK+ Sbjct: 24 VNEETRQTAVIDPAACPSYLMGHIKSEGLKIEAVLLTHGHFDHIMGLDG----FLKE 76 >gi|289580147|ref|YP_003478613.1| beta-lactamase [Natrialba magadii ATCC 43099] gi|289529700|gb|ADD04051.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 192 Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 15/123 (12%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N TV+VDTG +F + ++ +V +DAV+ TH H DH+ + + F +DV+ Sbjct: 21 GNRTVLVDTGANFDVVDAIQSRVDGLDAVVLTHTHRDHVGNVAAVTDAF-----DVDVWG 75 Query: 111 ---APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQ 166 D + H E L D Y + P + D +C +A G++ A ++ Sbjct: 76 YDDTIDAVDHAIEDGATL--TLGDDEYTALHTP---GHKDDHLCFYAADAGILFAGDLVF 130 Query: 167 QHG 169 Q+G Sbjct: 131 QNG 133 >gi|268317462|ref|YP_003291181.1| beta-lactamase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334996|gb|ACY48793.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 248 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 32/175 (18%) Query: 56 VIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYA- 110 +++D G D ++L + + + A++ TH H DH G R + L ++ PI +Y Sbjct: 32 IVIDCGGDVVQRLLATGLDPVKLTALILTHEHPDHTSGFPLFMERIWLLGRREPIPIYGI 91 Query: 111 --APDCMKHLFESFRY-CFKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 A D + F+++ ++ L +R + P +V+EN+ + A P+ Sbjct: 92 HPAIDQARRCFDTYNTSTWQGLPERDWHEVPYEPGALVLENDRW---------RVRAWPV 142 Query: 165 LQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG 212 + + ++G RF + +AY D P +++ +L +N D L+ +A G Sbjct: 143 VHP---VPTVGLRFEHLPTGRVIAYSCDTE--PTDAVVELGRNADILVHEATGEG 192 >gi|222480949|ref|YP_002567186.1| PhnP-like protein [Halorubrum lacusprofundi ATCC 49239] gi|222453851|gb|ACM58116.1| PhnP-like protein [Halorubrum lacusprofundi ATCC 49239] Length = 275 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 28 CDPTNPKNRR--TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPH 85 CD R +RS + +ER + +++VD PDF Q L V DA + TH H Sbjct: 21 CDTCAAARERGVSRSRFSVHVANER-TGESLLVDFSPDFRSQFLDNDVPLPDAGIVTHIH 79 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAA--PDCMKHLFESFRYCFKALDDR 132 DH+ G+ + Y L P+ + P + + E+ R + L+DR Sbjct: 80 FDHLDGLGNV--YRLVDGLPVHAPSETDPATDESVAETIRSKYDYLEDR 126 >gi|282861831|ref|ZP_06270895.1| ComEC/Rec2-related protein [Streptomyces sp. ACTE] gi|282563647|gb|EFB69185.1| ComEC/Rec2-related protein [Streptomyces sp. ACTE] Length = 872 Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VDTGPD + LR+ + + VL TH HADH+ G+ G LRG Sbjct: 636 GKGTGVVVDTGPDPRPVDRCLRDLGITRVPLVLLTHFHADHVRGLPGVLRG 686 >gi|323528296|ref|YP_004230448.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1001] gi|323385298|gb|ADX57388.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1001] Length = 306 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 85/232 (36%), Gaps = 42/232 (18%) Query: 7 FTILGCGASLGVPRITGDWGACD----PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + CD T RRT+SS+ VSE G + ++V+ P Sbjct: 3 IKVLGSSAGGGFPQWNCNCSNCDGVRRGTVRATRRTQSSIA---VSENGED-WLLVNASP 58 Query: 63 DFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ R + I AVL DH+ G+ LR ++ P+ ++A Sbjct: 59 DLLAQIAANPELQRARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLHATDA 114 Query: 114 CMKHLFESF-------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + L F YC ++ R P P+ ++ +P A + P Sbjct: 115 VWQDLTSGFPIAPILSHYC--GVEHRRIAPDGAPLAVDA--LPGVQIDALPLSSKAPPYS 170 Query: 167 QHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H LG G Y + A LE ++ D L++D Sbjct: 171 PHRNAPELGDNIGLLFTNRQTGKRAFYAPGLGAIEPHVLEAMRKADLLLVDG 222 >gi|254443119|ref|ZP_05056595.1| metallo-beta-lactamase superfamily protein [Verrucomicrobiae bacterium DG1235] gi|198257427|gb|EDY81735.1| metallo-beta-lactamase superfamily protein [Verrucomicrobiae bacterium DG1235] Length = 282 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%) Query: 52 SNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG------YFLKQK 103 S V VD G D +++L + L +DA++ TH H DH G+ LR FL K Sbjct: 106 SGRAVAVDAGTDAKPMIELLEGKGLELDAIILTHAHRDHFEGVGALRKRWPAARVFLSGK 165 Query: 104 RPIDVYAAPDCMKHLFESFRY 124 A P + + E FR+ Sbjct: 166 ED----AIPYETEAIEEGFRF 182 >gi|149908877|ref|ZP_01897537.1| hydroxyacylglutathione hydrolase [Moritella sp. PE36] gi|149808151|gb|EDM68092.1| hydroxyacylglutathione hydrolase [Moritella sp. PE36] Length = 258 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%) Query: 47 VSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +N IVD G D +QV+ +Q L ++A+L TH H DH IDG+ P Sbjct: 18 IKNTENNHCCIVDPGQADPVLQVINQQNLILEAILITHHHYDH---IDGISDILNASTNP 74 Query: 106 IDVYAA 111 + VY++ Sbjct: 75 VQVYSS 80 >gi|325265071|ref|ZP_08131798.1| VicX protein [Clostridium sp. D5] gi|324029761|gb|EGB91049.1| VicX protein [Clostridium sp. D5] Length = 265 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T ++VDTG D ++ L + +D +L TH H+DHI G+ G F +K + Sbjct: 21 HTHLLVDTGISKKKIDAGLKELEIKGEELDGILITHEHSDHIQGL----GVF-SRKYEVP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA P ++ + E++ K + +++PI + D + G I P Sbjct: 76 IYATPGTIEGI-ENYAPLGKMPE-----GLLHPI---HTDESFML----GDIMIDPFRIS 122 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R VA TD+ + ++EKL++LD ++++A Sbjct: 123 HDAREPSGYRMNCGGKAVAVATDLGIYDDYTVEKLKDLDAVLLEA 167 >gi|89099012|ref|ZP_01171891.1| ribonuclease Z [Bacillus sp. NRRL B-14911] gi|89086142|gb|EAR65264.1| ribonuclease Z [Bacillus sp. NRRL B-14911] Length = 308 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 33/158 (20%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R +S+ + + ERG T + D G Q+L + I+ + TH H DHI+ Sbjct: 13 PAKLRNVTSMALKLLEERG--TVWLFDCGEATQHQILHTSLKPRRIEKIFITHMHGDHIY 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE--------SFRYCFKALDDRTYPPIVNP 140 G+ GL F + ++VY P +K E +Y K ++ + Sbjct: 71 GLPGLLSSRSFQGGETEVEVY-GPKGLKDYIEISLSVSGTCLKYPLKIIE------AIEG 123 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ E+ D + K L HG I SLG+R Sbjct: 124 VIFEDEDFKVEAK-----------LLDHG-IPSLGYRI 149 >gi|290769886|gb|ADD61657.1| putative protein [uncultured organism] Length = 322 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 59/223 (26%), Positives = 83/223 (37%), Gaps = 59/223 (26%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADH 88 T P R +SL ++ T+++D G + + + V S IDAVL TH H DH Sbjct: 38 TQPLPDRALASLAVTV-----QGHTLLLDCGEGTQVSLRKYGVSSYRIDAVLLTHYHGDH 92 Query: 89 IHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI--------- 137 I G+ GL L + P+ +Y P ES AL P+ Sbjct: 93 ILGLPGLLQTLASLNRTAPLTIYGPPG-----QESIAAAIMALAGPLPYPVAWKIAEGTC 147 Query: 138 ------VNPIVIENNDVPIC----------------MKSAGGVIEAIPILQQHGRISSLG 175 V P +++ VP C K+AG +E +LQ I G Sbjct: 148 KEAGLTVTPFPLKHR-VPCCGYRLHLPRAGRFDAARAKAAGIPLEYWRVLQAGQSIG--G 204 Query: 176 FRFGN----------VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 F G+ V Y TD PA LE + D L +D+ Sbjct: 205 FAPGDVLGPPRRGLTVVYATDTRPCPA-VLEAARGADLLCMDS 246 >gi|154483590|ref|ZP_02026038.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] gi|149735500|gb|EDM51386.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] Length = 273 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 29/169 (17%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +N++++VD G + ++ ++ +ID ++ TH H+DHI G+ G FL+ K Sbjct: 26 ENNNSSILVDVGISRKKAEEGLEFFGKKPENIDGIVITHEHSDHIKGL----GVFLR-KY 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV-IENNDVPICMKSAGGVIEAIP 163 + VYA + C L+++T + + + + D +K IE +P Sbjct: 81 QVPVYATEGTIN--------CI--LNNKTVGKVDSDLFNVIKPDRDFSIKD----IELLP 126 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + H + +RF + A TD+ + + + LQNLD +I++ Sbjct: 127 LHISHDAADPVCYRFFEKEKSCAVVTDLGEYDDKLVSSLQNLDAALIES 175 >gi|322387746|ref|ZP_08061355.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321141613|gb|EFX37109.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 269 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSETGFKYSILASGSSGNSFYLETSKKKILVDAGLSGKKITSLLGEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H HADHIHG+ L +K +D+Y A D E+ +Y K Sbjct: 61 HEHADHIHGVG-----VLARKYGMDLY-ANDKTWQAMENSKYLGK 99 >gi|260887568|ref|ZP_05898831.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|330837941|ref|YP_004412521.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|260862743|gb|EEX77243.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|329745705|gb|AEB99061.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 292 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 45/188 (23%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 S+D V TH H+DHI G+ L LKQ + ++A P ++ + ES A+ + T+ Sbjct: 86 SLDGVFITHEHSDHIKGLPTL----LKQYH-LPLFAPPATLRAIRESL-----AVPEDTF 135 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC---TDVNAFP 191 P+ +++ G + H +S +G+ C TD+ Sbjct: 136 TPLTGNVML-------------GAVSVKSFSTLHDAVSPVGYAVCGSEKCALATDLGFLT 182 Query: 192 AESLEKLQNLDFLIIDA---------------LKNGLHSSHFSLSESLKKIELI----NP 232 + + ++ D LI++A LK + S+ LS S L+ P Sbjct: 183 NDVMTAIEGADALILEANHDRELLQRGSYPWHLKQRILSNRGHLSNSAAAWALVRLKKRP 242 Query: 233 KNAILTHM 240 + L HM Sbjct: 243 RAVFLAHM 250 >gi|254527009|ref|ZP_05139061.1| ribonuclease Z [Prochlorococcus marinus str. MIT 9202] gi|221538433|gb|EEE40886.1| ribonuclease Z [Prochlorococcus marinus str. MIT 9202] Length = 312 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 32/155 (20%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 G S GVP +T + + +LK+S+ SE + D G Q+++ Sbjct: 7 GTSSGVPSLTRNVSSL------------ALKLSQSSE-----VWLFDCGEGTQHQIMKSN 49 Query: 73 VLS--IDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPD-------CMKHLFES 121 + S I + TH H DHI+G+ GL + I++Y + +K F Sbjct: 50 IKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSKGIEIYGPSELRSFINSALKSSFCK 109 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPI---CMK 153 Y ++ Y + I+ ENN + + C+K Sbjct: 110 LSYPLNFVEVENYAS-KSKILFENNKIKVNCACLK 143 >gi|222111167|ref|YP_002553431.1| hydroxyacylglutathione hydrolase [Acidovorax ebreus TPSY] gi|221730611|gb|ACM33431.1| hydroxyacylglutathione hydrolase [Acidovorax ebreus TPSY] Length = 259 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+VD G + +Q LR L ++A+L TH H DH+ G++ LR Sbjct: 21 AQRAVVVDPGDAEPVLQALRSMGLPLEAILVTHHHGDHVGGVNALR 66 >gi|289771696|ref|ZP_06531074.1| integral membrane protein [Streptomyces lividans TK24] gi|289701895|gb|EFD69324.1| integral membrane protein [Streptomyces lividans TK24] Length = 392 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VDTGPD + LR + + VL TH HADH+ G+ G LRG Sbjct: 154 GEGTGVVVDTGPDPTLVDHCLRALGITRVPLVLLTHFHADHVAGLPGVLRG 204 >gi|88807743|ref|ZP_01123255.1| Putative hydroxyacylglutathione hydrolase [Synechococcus sp. WH 7805] gi|88788957|gb|EAR20112.1| Putative hydroxyacylglutathione hydrolase [Synechococcus sp. WH 7805] Length = 252 Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + RGS V+ + +Q L++Q L++ AVL TH HADHI G L Sbjct: 23 IWSRGSEAVVVDPAVAEPVIQTLQQQKLTLIAVLQTHHHADHIGGTPAL 71 >gi|226327468|ref|ZP_03802986.1| hypothetical protein PROPEN_01339 [Proteus penneri ATCC 35198] gi|225203994|gb|EEG86348.1| hypothetical protein PROPEN_01339 [Proteus penneri ATCC 35198] Length = 273 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 58/294 (19%), Positives = 115/294 (39%), Gaps = 60/294 (20%) Query: 9 ILGCGASLGVPRITGDWGAC---DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG AS G+P C K+ RT SS + + +++D P F Sbjct: 5 FLGTAASEGIPNPFCRCEHCLKARELGGKDIRTHSSAIVDDI--------MLIDVSPTFS 56 Query: 66 MQVLRE--QVLSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVY----AAPDCMK 116 Q++R+ + +++L+TH H DH + D + GY + P+ ++ A C++ Sbjct: 57 YQLMRDGMDATNFESLLFTHTHPDHFNVGDLFSRMEGYGFEINHPLHIFGNDRAINGCIE 116 Query: 117 HL--FESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVIEAIPILQQHGRI 171 L + R+ F L + + +E N P+ A + + +++ G++ Sbjct: 117 VLPGYSKERFAFHCL--------IPFVTVERNGYKITPLLANHAKWELCYVYHIEKDGKV 168 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHS-----SHFSLSESL 224 + Y D FP + + L+N LD ++ + GL+ +H SL Sbjct: 169 ---------IFYGHDSGWFPELTWKWLENKPLDIVVFEC-TYGLNGKDRTDNHMSLETVF 218 Query: 225 KKIELINPKNAI----------LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 E + + + ++H L +++ P + A+DG+ + Sbjct: 219 AAKEKLQQQGCLHQDTQIAVSHISHSGKLLHHELEAVCAPHNIRVAYDGLTLET 272 >gi|291525360|emb|CBK90947.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale DSM 17629] Length = 267 Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 24/136 (17%) Query: 78 AVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 +L TH H DHI G+ + R Y + A C K + +DD + P Sbjct: 52 GILVTHEHIDHIAGLGVMARRYHMPIYATKATIGAIKCTKSVGN--------IDDELFHP 103 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA 192 I + D I G IE P+ H + +RF N +A TD+ + Sbjct: 104 IEAGV-----DFTI------GDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDD 152 Query: 193 ESLEKLQNLDFLIIDA 208 + KLQNLD L+++A Sbjct: 153 ALVSKLQNLDGLLLEA 168 >gi|159028812|emb|CAO89983.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 318 Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 8/123 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR + S I + TH H DHI Sbjct: 13 PTRSRNVSSIAL-RLPQRAE--IWLFDCGEGTQHQLLRSDLKSSQIRRIFITHMHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT-YPPIVNPIVIENND 147 G+ GL + ID+Y P +L +Y + L +R PI I+ E+ + Sbjct: 70 GLIGLLASIGLAGSAQDIDIYGPPGLGDYLRACAKYSYTNLANRVRVHPISPGILYEDEE 129 Query: 148 VPI 150 + Sbjct: 130 FTV 132 >gi|145591332|ref|YP_001153334.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283100|gb|ABP50682.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 249 Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust. Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 45/209 (21%) Query: 56 VIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYA-- 110 V+VD G + ++ VL +D V TH H DH G+ + + ++K+PI ++A Sbjct: 32 VVVDCGVGCHYRLSDRGVLGEVDYVFITHSHMDHFLGLPEALFQAHIEERKKPITIFAPS 91 Query: 111 -APDCMK----HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 D ++ H+ + RY + I+ + + ++ G +EA P Sbjct: 92 RVEDTIRAAAPHVLTNMRY---------------AVNIKRIEPGVLLEVPGLRVEAAPAC 136 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAF-------PAESLEKL-QNLDFLIIDALKNGLHS-- 215 H + GFR DV+ F SLE+L + +D LI +A N + Sbjct: 137 -HHTAEEAYGFRIR-----ADVDVFFTGDTAPGCTSLERLGEGVDVLIHEATCNEDYREI 190 Query: 216 ----SHFSLSESLKKIELINPKNAILTHM 240 +H + ++L + E++ +N +L H+ Sbjct: 191 CAKYAHATTFQALAEAEVMMAENLVLNHI 219 >gi|72392717|ref|XP_847159.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62359204|gb|AAX79647.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70803189|gb|AAZ13093.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 367 Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 56 VIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +++D G F L+ V AVL TH HAD +GID LR F ++ PI VYA Sbjct: 78 ILIDCGKTFRESALKVFPSFLVRDFSAVLLTHDHADASYGIDDLR-EFSRKDVPIGVYAD 136 Query: 112 PDCMKHLFESFRYCF 126 + + + Y F Sbjct: 137 ETTLAAMRGVYPYLF 151 >gi|238923925|ref|YP_002937441.1| ribonuclease Z [Eubacterium rectale ATCC 33656] gi|238875600|gb|ACR75307.1| ribonuclease Z [Eubacterium rectale ATCC 33656] Length = 250 Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 24/136 (17%) Query: 78 AVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 +L TH H DHI G+ + R Y + A C K +DD + P Sbjct: 35 GILVTHEHIDHIAGLGVMARRYHMPIYATKATIGAIKCTK--------SVGNIDDELFHP 86 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA 192 I + D I G IE P+ H + +RF N +A TD+ + Sbjct: 87 IEAGV-----DFTI------GDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDD 135 Query: 193 ESLEKLQNLDFLIIDA 208 + KLQNLD L+++A Sbjct: 136 ALVSKLQNLDGLLLEA 151 >gi|268323331|emb|CBH36919.1| ribonuclease Z [uncultured archaeon] Length = 335 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHI 89 + P R S++ ++R E ++ D G Q++R + + I ++ +H HADH+ Sbjct: 40 STPTPNRNPSAIAVNREGE-----LILFDCGEGAQQQMMRAKSGMKITSIFISHFHADHV 94 Query: 90 HGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 GI GL Q R P+++Y K L+ Sbjct: 95 LGIPGLLQTMALQDRQEPLEIYGPKQVDKFLY 126 >gi|166712954|ref|ZP_02244161.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 299 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 28/119 (23%) Query: 9 ILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A G P+ W D T RRT++S+ +S ER + +++ Sbjct: 5 VLGSAAGGGHPQWNCHTPASLRAWQRADATQ---RRTQASIAVSADGERWA----LINAS 57 Query: 62 PDFYMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L L I+AVL T DHI G+ +R + +P ++A+ Sbjct: 58 PDFRQQILATPALWPQQGLRHSPIEAVLLTSGEVDHIAGLLSMR-----ESQPFALHAS 111 >gi|15896774|ref|NP_350123.1| metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|15026632|gb|AAK81463.1|AE007850_4 Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|325510945|gb|ADZ22581.1| Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum EA 2018] Length = 261 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 30/165 (18%) Query: 53 NTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N+ V++D G + ++ ++E ID + TH H+DHI G+ L +K I Sbjct: 21 NSKVLIDAGLSGKTIEKALKEIKEDPNEIDGIFVTHEHSDHIKGVG-----VLSRKYNIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA K + S K DD I+ IE D+ I IP Sbjct: 76 IYANELTWKAMMNSIG---KIKDDNI--KIITQDYIEIKDMNILNYK-------IP---- 119 Query: 168 HGRISSLGFRF--GNVAYC--TDVNAFPAESLEKLQNLDFLIIDA 208 H S G++ GN + C TD+ F E K+ + D +++++ Sbjct: 120 HDAASPCGYKILSGNKSACVATDLGHFADEVKSKISDADVILLES 164 >gi|254831421|ref|ZP_05236076.1| hypothetical protein Lmon1_08708 [Listeria monocytogenes 10403S] Length = 306 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G Q++R Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|56420868|ref|YP_148186.1| ribonuclease Z [Geobacillus kaustophilus HTA426] gi|76363377|sp|Q5KXG8|RNZ_GEOKA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|56380710|dbj|BAD76618.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 307 Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DH+ Sbjct: 13 PAKERNVSSVALQLLGERGA--TWLFDCGEATQHQILHTAIRPRRIEHIFITHLHGDHLF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ V+ P ++ E+ Sbjct: 71 GLPGLLGSRSFQSGETPLTVF-GPKGIRSFVET 102 >gi|289667029|ref|ZP_06488104.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 299 Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Query: 6 HFTILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 H +LG A G P+ A + RRT++S+ +S R V+++ Sbjct: 2 HIIVLGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADDAR----WVLINAS 57 Query: 62 PDFYMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLR 96 PDF Q+L L I+AVL T DHI G+ +R Sbjct: 58 PDFRQQILATPALWPQHGLRHLPIEAVLLTSGEIDHIAGLLSMR 101 >gi|313638629|gb|EFS03759.1| putative secreted lipoprotein [Listeria seeligeri FSL S4-171] Length = 187 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 6/52 (11%) Query: 48 SERGSNTTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 SE G TT+++DTG D + L+E +V ID +L THPHADHI D + Sbjct: 56 SEDG--TTILIDTGRQDDDRILTDLKEAKVEKIDLLLLTHPHADHIGNADKI 105 >gi|313125758|ref|YP_004036028.1| metal-dependent hydrolase, beta-lactamase superfamily i [Halogeometricum borinquense DSM 11551] gi|312292123|gb|ADQ66583.1| metal-dependent hydrolase, beta-lactamase superfamily I [Halogeometricum borinquense DSM 11551] Length = 252 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 18/94 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE-----RGSNTTVIVDTG 61 FT+LG G LGVP P + + +R TT+++D Sbjct: 3 FTLLGTGDVLGVP-------------PPFQTLADANAAARRRRCGALIETETTTLLLDVP 49 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 P+F + + V S+DA TH H DH+ GID L Sbjct: 50 PEFRDGIRQADVGSVDAAFVTHWHHDHVGGIDDL 83 >gi|52549192|gb|AAU83041.1| metallo-beta-lactamase [uncultured archaeon GZfos26D6] Length = 335 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHI 89 + P R S++ ++R E ++ D G Q++R + + I ++ +H HADH+ Sbjct: 40 STPTPNRNPSAIAVNREGE-----LILFDCGEGAQQQMMRAKSGMKITSIFISHFHADHV 94 Query: 90 HGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 GI GL Q R P+++Y K L+ Sbjct: 95 LGIPGLLQTMALQDRQEPLEIYGPKQVDKFLY 126 >gi|225026136|ref|ZP_03715328.1| hypothetical protein EUBHAL_00377 [Eubacterium hallii DSM 3353] gi|224956541|gb|EEG37750.1| hypothetical protein EUBHAL_00377 [Eubacterium hallii DSM 3353] Length = 215 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 4/58 (6%) Query: 56 VIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +I+D P+ ++ L ++ S+D VL TH H DHI ++GLR ++ K + VYAA Sbjct: 30 IIIDPAGSPEELIKFLEDEGYSLDGVLLTHGHHDHIGALEGLREHYDPWK--LRVYAA 85 >gi|325982780|ref|YP_004295182.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] gi|325532299|gb|ADZ27020.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] Length = 254 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 28/179 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCM----KHLFESFRYC 125 E+++ ID VL TH H DH+ I L + +PI ++A P + KHLF + + Sbjct: 41 EEMVRIDHVLVTHAHLDHVAFIPFLVDTVGSMRAKPIIIHAIPATLDILQKHLFNWYLWP 100 Query: 126 -FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 F + T P + + N +C+ I L H I ++G++ + Sbjct: 101 DFTKIPVATMPYMRYEALALNQT--LCLNQ-----RKITPLPAHHTIPAVGYQLDSGQAS 153 Query: 181 VAYCTDVNAFPAE--SLEKLQNLDFLIID-ALKN-----GLHSSHFS---LSESLKKIE 228 + + D A ++ K++NL +LII+ A N S H+ L+E LKK+E Sbjct: 154 LVFTGDTTTNDALWIAVNKIENLKYLIIESAFCNRKRDIAQRSRHYCPSLLAEDLKKLE 212 >gi|205373950|ref|ZP_03226751.1| ribonuclease Z [Bacillus coahuilensis m4-4] Length = 312 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 24/174 (13%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R SSL + + ER + D G Q+L + I+ + TH H DHI Sbjct: 13 PAKHRNVSSLALKLLQER--KAVWLFDCGEATQHQILHTSLKPRRIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL G F + P+ VY +++ S + L YP ++ + IE + + Sbjct: 71 GLPGLLGSRSFQGGESPVTVYGPRGIKEYILTSLKISGTYLK---YP--LHILEIEESGI 125 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL-EKLQNL 201 I VI A L +HG + S GFR + P E L EKL++L Sbjct: 126 -IFEDDQFRVITA---LLEHG-LPSYGFRI-------EEKDRPGELLVEKLESL 167 >gi|190573028|ref|YP_001970873.1| putative glutathione hydrolase [Stenotrophomonas maltophilia K279a] gi|226724033|sp|B2FR57|GLO2_STRMK RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|190010950|emb|CAQ44559.1| putative glutathione hydrolase [Stenotrophomonas maltophilia K279a] Length = 254 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 T V+VD G + L +Q L +D +L TH H DHI G+ L+ F Sbjct: 22 GTAVVVDPGDAAPVLALADQGLRVDTILLTHHHDDHIGGVPALQARF 68 >gi|296271885|ref|YP_003654516.1| carbon-phosphorus lyase complex accessory protein [Arcobacter nitrofigilis DSM 7299] gi|296096060|gb|ADG92010.1| carbon-phosphorus lyase complex accessory protein [Arcobacter nitrofigilis DSM 7299] Length = 241 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 46/244 (18%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG S G+P C N+ +L S + +++D G + + Sbjct: 6 LGTADSGGIPVHNCKCLICQEYRENNK---INLATSAYLTCKNGEIILLDAGIENISTIF 62 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 + I A+ TH HADH G+ LR ++ P D D KH ++ Y Sbjct: 63 DNK--KIKAIFLTHFHADHTLGLLRLRYSAQSIECYHPKDKKGFADLFKHT-KAINY--- 116 Query: 128 ALDDRTYPPI-VNPIVIENNDVPICMK----SAGGVIEAIPILQQHGRISSLGFRFGNVA 182 +++ + PI +N ++ PI +K + G +IE+ +A Sbjct: 117 -IENTPFTPIKINELIF----TPIPLKHSKNTTGYLIES---------------ENKTIA 156 Query: 183 YCTDVNAFPAESLEKL--QNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ES+ L +N+D IDA NG +H + E+ K ++ IN K + Sbjct: 157 YLTDCAGISKESMNFLLSKNIDECYIDAGLAPNFNNG---NHLNYEEATKLLDRINAKKS 213 Query: 236 ILTH 239 L H Sbjct: 214 HLIH 217 >gi|295095454|emb|CBK84544.1| phosphonate metabolism protein PhnP [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 252 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 41/272 (15%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVDTGPD 63 T+ G G + VP D AC RR R R + + +++ ++D G Sbjct: 6 TLTGTGGAQLVPVFGCDCAAC-------RRARLQENYRRRPCSAAVKFNDSVTLLDAGIP 58 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 M S +L TH H DH+ G+ LR I VY PD + FR Sbjct: 59 HLMDDWPAG--SFRQILLTHYHMDHVQGLFPLR---WGVGATIPVYGPPD-DAGCDDLFR 112 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 + L D ++ V P V+ + G + +P+ H +++ G+ Sbjct: 113 H--PGLLDFSH--TVEPFVM--------FELQGLRVTPLPL--NHSKLT-FGYLLESAHS 157 Query: 180 NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKN 234 VA+ +D P +++ L N +IID + +H L+ + E+I Sbjct: 158 RVAWLSDTAGLPDKTVTFLLNNQPQAMIIDCSHEPRPETPRNHCDLNTVIALNEVIGCPQ 217 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D M+ PS + +DGM Sbjct: 218 VILTHISHQFDVWMMDNPLPSGIEAGYDGMML 249 >gi|218248358|ref|YP_002373729.1| ribonuclease Z [Cyanothece sp. PCC 8801] gi|257060317|ref|YP_003138205.1| ribonuclease Z [Cyanothece sp. PCC 8802] gi|254808628|sp|B7K1N1|RNZ_CYAP8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218168836|gb|ACK67573.1| ribonuclease Z [Cyanothece sp. PCC 8801] gi|256590483|gb|ACV01370.1| ribonuclease Z [Cyanothece sp. PCC 8802] Length = 314 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR ++ I + TH H DHI+ Sbjct: 13 PTRSRNVSSVAL-RLPQRAE--VWLFDCGEGTQHQLLRSDVKISQITRIFITHMHGDHIY 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 G+ GL + I++Y PD + +L +Y L R V P ++ ++ Sbjct: 70 GLMGLLASCGLAGNAQDIEIYGPPDLIDYLKACAKYSQVKLSHRVRVYGVRPGILYEDE 128 >gi|288801199|ref|ZP_06406654.1| ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) [Prevotella sp. oral taxon 299 str. F0039] gi|288331810|gb|EFC70293.1| ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) [Prevotella sp. oral taxon 299 str. F0039] Length = 305 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 14/127 (11%) Query: 57 IVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAP 112 +VD G +Q+ + V + I A+L +H H DH G+ GL F L + P+ VY AP Sbjct: 35 MVDCGECAQIQLRKSHVNFMKIGAILISHLHGDHCFGLIGLISTFGMLGRTAPLYVY-AP 93 Query: 113 DCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 ++LF++ + K L T+ + N + N V +S IE+IP+ RI Sbjct: 94 KEYENLFKAQMNFFCKGL---TFDVVFNGVDTTVNTVIYDDRSL--TIESIPLDH---RI 145 Query: 172 SSLGFRF 178 S GF F Sbjct: 146 SCSGFLF 152 >gi|301330530|ref|ZP_07223141.1| phosphonate metabolism protein PhnP [Escherichia coli MS 78-1] gi|300843513|gb|EFK71273.1| phosphonate metabolism protein PhnP [Escherichia coli MS 78-1] Length = 252 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 101/260 (38%), Gaps = 37/260 (14%) Query: 17 GVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 GVP + AC +P+ RR S + + ++ ++D G R Sbjct: 15 GVPAWGCECAACARARRSPQYRRQPCSGVV-----KFNDAITLIDAGRHDLTD--RWSPG 67 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-T 133 S L TH H DH+ G+ LR I VY PD + DD Sbjct: 68 SFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD------------EQGCDDLFK 112 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVNAF 190 +P +++ + VP + G ++ P+ H +++ L VA+ +D Sbjct: 113 HPGLLD---FSHTAVPFVVFDLQG-LQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGL 168 Query: 191 PAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 P ++L+ L N ++ID + +H L+ L ++I ILTH+ D Sbjct: 169 PEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFD 228 Query: 246 YDMVLKSTPSRVVPAFDGMQ 265 ++ + PS FDGM+ Sbjct: 229 AWLMENALPSGFEVGFDGME 248 >gi|209879519|ref|XP_002141200.1| hypothetical protein [Cryptosporidium muris RN66] gi|209556806|gb|EEA06851.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 372 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 54/245 (22%) Query: 55 TVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PI 106 ++ D G F VL + ++ +I++++ TH H D + G++ YF+K P+ Sbjct: 92 NILFDMGKTFRSSVLSIFPKFKISAINSIILTHFHDDAVGGLN-YASYFVKNIHDSNIPL 150 Query: 107 DVYAAPDCMKHLFESF---------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG- 156 +Y D +K +++ F R C K L +N + I V C Sbjct: 151 PIYMNSDTIKFVYKRFHNSIIDDLNRDC-KVLQFGHSSYELNVLDILLGRVTNCNSHEAI 209 Query: 157 ---------------------GVIEAIPILQ---QHGRISSLGFR----FGNVAYCTDVN 188 IE I I HG +GF + NV + +D Sbjct: 210 QYYLSLKDSIDEPESRFNIVEFFIEDIKITSFPMYHGNCICMGFCIHYPYTNVIFISDYT 269 Query: 189 -AFPAESLEKLQNLDF----LIIDALKNGLHS-SHFSLSESLKKIELINPKNAILTHMHV 242 P SL+ L+++++ LI+D++ S SH ++SESL+ ++INP M Sbjct: 270 FPIPKVSLDFLKSMEYNVSILILDSIAFKKSSNSHATISESLELAQIINPHFLYFVGMSC 329 Query: 243 DLDYD 247 DL+Y+ Sbjct: 330 DLEYN 334 >gi|18310345|ref|NP_562279.1| ribonuclease Z [Clostridium perfringens str. 13] gi|168214882|ref|ZP_02640507.1| ribonuclease Z [Clostridium perfringens CPE str. F4969] gi|41017569|sp|Q8XKN1|RNZ_CLOPE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|18145025|dbj|BAB81069.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170713673|gb|EDT25855.1| ribonuclease Z [Clostridium perfringens CPE str. F4969] Length = 316 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 38/192 (19%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-AAPDCMKHLF 119 G M+V SID + +H H DHI+G+ GL R D+Y P+ +K + Sbjct: 39 GTQVSMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPNGIKEVI 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS------ 173 E F L Y P I+ + +++ +K E I +++ + +ISS Sbjct: 99 EGF------LITLPYLPYKLNILEDASNLEFMVKK-----EKIELVELNEKISSDLTIET 147 Query: 174 ---------LGFRFG-------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 LG+ F NV +N P E KLQ + + ++ +K + S+ Sbjct: 148 LGLDHSSPCLGYSFNIRRGRKFNVEKAL-MNKVPKELWSKLQRNEEVSLNGVK---YYSY 203 Query: 218 FSLSESLKKIEL 229 L + K I+L Sbjct: 204 MVLGDERKGIKL 215 >gi|325969390|ref|YP_004245582.1| beta-lactamase [Vulcanisaeta moutnovskia 768-28] gi|323708593|gb|ADY02080.1| beta-lactamase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 317 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 31/160 (19%) Query: 53 NTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N V++DTG D ++ L I A++ TH HADHI G + ++ Sbjct: 47 NECVVIDTGIDEDSGRRIFNAVKSLNLKIRAIVNTHHHADHIGG-----NALIVKRSGAT 101 Query: 108 VYAAPD----CMKHLFESFRYCFKALDDRTYPP-IVNPIVIENNDVPI-----CMKSAGG 157 VYA P+ + + E Y F ++PP ++ ++E VP+ + G Sbjct: 102 VYATPEDKPFIERPVLEPL-YLFG-----SFPPKLLRTKLLEAEGVPVRDLDDLRREVG- 154 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK 197 EA+P L H + +G +GNV + D FP + ++K Sbjct: 155 -FEAMP-LPGH-TMGMVGISYGNVLFTADA-FFPVDIIQK 190 >gi|291533903|emb|CBL07016.1| Predicted hydrolase (metallo-beta-lactamase superfamily) [Megamonas hypermegale ART12/1] Length = 119 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%) Query: 25 WGACDPTNPKNRRTRSSLKISRVS-ERGSNT-------TVIVDTGP----DFYMQVLREQ 72 WG ++ +LKI + +G T T+++DTG D +++L+E+ Sbjct: 9 WGCGKDNTTQSANKDEALKIEMLDIGQGDATLIQTKEQTIMIDTGDIDERDNLVKLLKER 68 Query: 73 -VLSIDAVLYTHPHADHIHG 91 + +ID ++ THPHADH+ G Sbjct: 69 NITTIDKLIITHPHADHLGG 88 >gi|313634046|gb|EFS00728.1| late competence protein [Listeria seeligeri FSL N1-067] Length = 376 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 10/66 (15%) Query: 48 SERGSNTTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 SE G TT+++DTG D + L+E +V ID +L THPHADHI D + + Sbjct: 56 SEDG--TTILIDTGRQDDDRILTDLKEAKVEKIDLLLLTHPHADHIGNADKIIATY---- 109 Query: 104 RPIDVY 109 +P +++ Sbjct: 110 KPKEIW 115 >gi|240141823|ref|YP_002966331.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] gi|240011765|gb|ACS42990.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] Length = 528 Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 L++ + + AV+ TH H DHI G+ L Y K + A +C++ E + + + Sbjct: 91 ALKQMLGRLVAVVVTHAHYDHIGGLPALAPYLPKGTKVYATKFAAECVRSQLERY-HLDE 149 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAY 183 +D RT+ P N + PI + + A I GR+ G +R NV + Sbjct: 150 HVDIRTFSPNSNLTLKSFTLTPIRVAHSSPEALAFGISTPAGRVLHTGDWRIDEAPNVTW 209 Query: 184 CTDVNA 189 TD+ A Sbjct: 210 KTDLAA 215 >gi|149918433|ref|ZP_01906923.1| Metallo-beta-lactamase [Plesiocystis pacifica SIR-1] gi|149820733|gb|EDM80143.1| Metallo-beta-lactamase [Plesiocystis pacifica SIR-1] Length = 279 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 9/100 (9%) Query: 40 SSLKISRVSERGSNTTVIV-DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 S L++ V+E G T + V + G F + + + L D +L +H HADH+ GI Y Sbjct: 12 SGLRLVGVTEGGVETNLRVPELGVMFDIGMCPPKALGFDRLLISHGHADHLGGIH----Y 67 Query: 99 FLKQ----KRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +L Q K+ + AAP + E + A++ Y Sbjct: 68 YLSQRGMRKQKVPTIAAPKALAPQLEQMLELWSAVEGFDY 107 >gi|88604008|ref|YP_504186.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189470|gb|ABD42467.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 257 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 58 VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 +D GPD + + V +D ++ THPH DHI G+ + Q P+ +Y + H Sbjct: 51 MDAGPDILSYLQYQGVTRLDVLVSTHPHTDHIGGMSDIL-----QALPVSLY-VDNGATH 104 Query: 118 LFESFRYCFKALDDRTYP 135 ++R KAL + P Sbjct: 105 TTPAYRNLEKALIKKQIP 122 >gi|322368257|ref|ZP_08042826.1| flavoprotein [Haladaptatus paucihalophilus DX253] gi|320552273|gb|EFW93918.1| flavoprotein [Haladaptatus paucihalophilus DX253] Length = 221 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 55 TVIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 TV+VD G D + V+RE ++DAV+ TH H DH+ +D + F Sbjct: 25 TVLVDAGAMDGVVDVIREHTDTLDAVVLTHQHGDHVEQLDAVLDEF 70 >gi|296274308|ref|YP_003656939.1| coenzyme PQQ biosynthesis protein B [Arcobacter nitrofigilis DSM 7299] gi|296098482|gb|ADG94432.1| coenzyme PQQ biosynthesis protein B [Arcobacter nitrofigilis DSM 7299] Length = 304 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 21/126 (16%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G+P+ + C + RRT+SS+ I SE G N V+ +T PD Sbjct: 5 VLGSSAGGGLPQFNCNCDNCKAYREGKKTVKRRTQSSITI---SEDGKN-WVLFNTSPDI 60 Query: 65 --------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++Q + I A+++ DH G+ L++ P +VY + + Sbjct: 61 LEQIHNSPFLQPQERRETKIKAIIFIDAQIDHTTGL-----LMLREGCPHEVYCTKEVNE 115 Query: 117 HLFESF 122 L SF Sbjct: 116 ELNTSF 121 >gi|322389963|ref|ZP_08063503.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321143399|gb|EFX38837.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 285 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 35/124 (28%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVD--TGPDFYMQVLREQVL-------------- 74 T + R+ + S+ +E G +++ +G FY++ ++++L Sbjct: 6 TGIQKRKNKESM-----TEEGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLL 60 Query: 75 --------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 +DA+L TH H+DHIHG+ L +K +D+YA K + E +Y Sbjct: 61 AEIDRKPEDLDAILITHEHSDHIHGVG-----VLARKYGMDLYANEATWKAM-EGTKYLG 114 Query: 127 KALD 130 K D Sbjct: 115 KVDD 118 >gi|300924360|ref|ZP_07140337.1| phosphonate metabolism protein PhnP [Escherichia coli MS 182-1] gi|300419450|gb|EFK02761.1| phosphonate metabolism protein PhnP [Escherichia coli MS 182-1] Length = 252 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 41/262 (15%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG----SNTTVIVDTGPDFYMQVLREQ 72 GVP + AC R R S + R G ++ ++D G R Sbjct: 15 GVPAWGCECAAC-------ARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + DD Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD------------EQGCDDL 110 Query: 133 -TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS---LGFRFGNVAYCTDVN 188 +P +++ + VP + G ++ P+ H +++ L VA+ +D Sbjct: 111 FKHPGLLD---FSHTAVPFVVFDLQG-LQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNPVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQ 265 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGME 248 >gi|167465580|ref|ZP_02330669.1| hypothetical protein Plarl_23976 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 207 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 31/50 (62%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +S+R + +I+D G + + R + L I+++L TH H DHI G+D +R Sbjct: 19 ISDRNAGKGIIIDPGMNPGPLLKRIENLDIESILLTHAHLDHIGGVDEIR 68 >gi|254519346|ref|ZP_05131402.1| metallo-beta-lactamase [Clostridium sp. 7_2_43FAA] gi|226913095|gb|EEH98296.1| metallo-beta-lactamase [Clostridium sp. 7_2_43FAA] Length = 294 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 43/203 (21%) Query: 56 VIVDTGP----DFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD GP D M+ L E+ + + V+ THPH DHI G+ + V+ Sbjct: 66 ILVDAGPRSDADKLMKQLEEKNIDDFEIVIATHPHEDHIGGM-------------VKVFE 112 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA------GGVIEAI-P 163 D ESF +T+ ++N + E + + G IE P Sbjct: 113 KYDV-----ESFYMPKVTHTTKTFENMINAVSKEGLKAKVIKEGTSFDLGNGAKIEVYSP 167 Query: 164 ILQQHGRISS----LGFRFGNVAYCTDVNAFPAESLEKL----QNLDFLIIDALKNGLHS 215 I + + + + FGN +Y +A E + +NLD D LK G H Sbjct: 168 IYESYEEFNDYSPIMKLTFGNTSYMFTGDAEAHAEQEVVAKYPKNLD---ADVLKFGHHG 224 Query: 216 SHFSLSESLKKIELINPKNAILT 238 S S S + + +E ++P+ +++ Sbjct: 225 S--STSSTKEFVEAVSPEYGVIS 245 >gi|322383056|ref|ZP_08056884.1| metal-binding hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152825|gb|EFX45450.1| metal-binding hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 202 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 31/50 (62%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +S+R + +I+D G + + R + L I+++L TH H DHI G+D +R Sbjct: 14 ISDRNAGKGIIIDPGMNPGPLLKRIENLDIESILLTHAHLDHIGGVDEIR 63 >gi|283797774|ref|ZP_06346927.1| VicX protein [Clostridium sp. M62/1] gi|291074452|gb|EFE11816.1| VicX protein [Clostridium sp. M62/1] gi|295092013|emb|CBK78120.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Clostridium cf. saccharolyticum K10] Length = 265 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 22/138 (15%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +D VL TH H+DH+ G+ L +K + VY+ + ++ + K+L D Y Sbjct: 48 ELDGVLITHEHSDHVKGLG-----VLARKYGVPVYSTRETLEEI-----KGMKSLGD--Y 95 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF 190 P + V+ + D I G ++ P H + + +R +VA TD+ + Sbjct: 96 PEELLRPVVHDVDFRI------GDLDIKPFKISHDAANPVAYRVQEGRKSVAVATDMGNY 149 Query: 191 PAESLEKLQNLDFLIIDA 208 +++ LQ LD +++++ Sbjct: 150 SQYTIDHLQGLDAILLES 167 >gi|254524964|ref|ZP_05137019.1| hydroxyacylglutathione hydrolase [Stenotrophomonas sp. SKA14] gi|219722555|gb|EED41080.1| hydroxyacylglutathione hydrolase [Stenotrophomonas sp. SKA14] Length = 254 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 25/47 (53%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G + L EQ L +D +L TH H DHI G+ L+ F Sbjct: 22 GAAVVVDPGDAAPVLALAEQGLRVDTILLTHHHDDHIGGVPALQARF 68 >gi|255942096|ref|XP_002561817.1| Pc16g15230 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586440|emb|CAP94193.1| Pc16g15230 [Penicillium chrysogenum Wisconsin 54-1255] Length = 535 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 18/124 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN----AFPAE 193 VN + +D +C+ + GG +E + L +HGRI DVN F Sbjct: 422 VNESTVATHDTALCIAARGGDLEMVRELLRHGRI--------------DVNLRNQWFEDP 467 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ I+DAL +HFSL SL + + AI + + D +LK + Sbjct: 468 LMLAVRGEHLSIVDALVANPRLTHFSLRRSLDLAKDYCIQKAIRSTTYDDNTTKKLLKRS 527 Query: 254 PSRV 257 P R+ Sbjct: 528 PRRI 531 >gi|15922660|ref|NP_378329.1| hypothetical protein ST2327 [Sulfolobus tokodaii str. 7] gi|15623450|dbj|BAB67438.1| 232aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 232 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI-D 93 ++R +SS+ I S G++ + + TG +F ++ L +L +A+ TH H DHI+G+ D Sbjct: 16 SKRVKSSIYIK--SNEGTSVLLDLGTGANFKIEDL--NLLDFEAIFITHLHIDHINGLFD 71 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHL 118 L + + + I VY+ P + L Sbjct: 72 HLVQRKILRMKEIRVYSPPGILNVL 96 >gi|255952038|ref|XP_002566785.1| Pc24g01350 [Penicillium chrysogenum Wisconsin 54-1255] gi|211904407|emb|CAP87043.1| Pc24g01350 [Penicillium chrysogenum Wisconsin 54-1255] Length = 535 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 18/124 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA----FPAE 193 VN + +D +C+ + GG +E + L +H RI DVN F Sbjct: 422 VNESTVATHDTALCIAARGGDLEMVRELLRHDRI--------------DVNLRNQWFEDP 467 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ F I+DAL +HFSL SL + + AI + ++ D +LK + Sbjct: 468 LMLAVRGGHFSIVDALVANPRLTHFSLRRSLDLAKDYCIQKAIRSRIYDDNTTKKLLKRS 527 Query: 254 PSRV 257 P R+ Sbjct: 528 PRRI 531 >gi|229019356|ref|ZP_04176180.1| Ribonuclease Z [Bacillus cereus AH1273] gi|229025602|ref|ZP_04182009.1| Ribonuclease Z [Bacillus cereus AH1272] gi|228735696|gb|EEL86284.1| Ribonuclease Z [Bacillus cereus AH1272] gi|228741924|gb|EEL92100.1| Ribonuclease Z [Bacillus cereus AH1273] Length = 307 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F + VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTTLTVY-GPKGIKQFIE 101 >gi|160938395|ref|ZP_02085750.1| hypothetical protein CLOBOL_03293 [Clostridium bolteae ATCC BAA-613] gi|158438768|gb|EDP16525.1| hypothetical protein CLOBOL_03293 [Clostridium bolteae ATCC BAA-613] Length = 335 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ THPH+DHI G+D + F P+D P ++H ++F ++ Sbjct: 41 QGVTKLDYVIGTHPHSDHIGGLDKVIDTF-----PVDKVILPP-VEHTTKTFEDVLDSIA 94 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--FGNVAY--CTD 186 R I P ++ D+ ++ ++ + S+G R +G+ ++ C D Sbjct: 95 SRGL-KITKPTPGDSYDL---GDASFTILSPVKDYGSDLNNWSVGVRLTYGDNSFVMCGD 150 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES-LKKI 227 E + ++N L D LK G H S S S++ LKK+ Sbjct: 151 AENQAEEDI--IKNGAVLKADVLKAGHHGSSTSTSDAFLKKV 190 >gi|57640670|ref|YP_183148.1| metallo-beta-lactamase superfamily hydrolase [Thermococcus kodakarensis KOD1] gi|57158994|dbj|BAD84924.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 270 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Query: 56 VIVDTGPD--FYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V+VDTG D + +RE ++ SIDA+ TH H DH GI L + P+DVYA Sbjct: 34 VLVDTGTDGRVLLNNIRELGVELDSIDALFITHGHYDHTGGIAEL---LKARSEPLDVYA 90 Query: 111 AP 112 P Sbjct: 91 HP 92 >gi|284165784|ref|YP_003404063.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015439|gb|ADB61390.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 192 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Query: 55 TVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 TV+VD G +F + +RE+V +DAV+ TH H DH+ ++ ++ F Sbjct: 24 TVLVDAGANFDGVAAVRERVDDLDAVVLTHTHRDHVGNLEAVKDAF 69 >gi|258543469|ref|YP_003188902.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256634547|dbj|BAI00523.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256637605|dbj|BAI03574.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-03] gi|256640657|dbj|BAI06619.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-07] gi|256643714|dbj|BAI09669.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-22] gi|256646769|dbj|BAI12717.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-26] gi|256649822|dbj|BAI15763.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-32] gi|256652810|dbj|BAI18744.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655866|dbj|BAI21793.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-12] Length = 223 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 52 SNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDV 108 + VIVD G D + L++ +L ++A+L TH H DH G+ L RG QK DV Sbjct: 30 TRKAVIVDAGGDVDVLLDFLKKNILEVEAILLTHGHLDHAGGVAALCRGLENTQKTQPDV 89 Query: 109 YA 110 Sbjct: 90 VG 91 >gi|240102275|ref|YP_002958583.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] gi|239909828|gb|ACS32719.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] Length = 255 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G+ G P+ C NP RRTR SL + +VD PD + Sbjct: 5 ILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYFDKT---------LVDPSPDLHY 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + R ++ VL TH H DHI G+ L+ Sbjct: 56 HLERLNK-RVERVLITHGHFDHIFGLPELQ 84 >gi|229075848|ref|ZP_04208824.1| Ribonuclease Z [Bacillus cereus Rock4-18] gi|229098612|ref|ZP_04229552.1| Ribonuclease Z [Bacillus cereus Rock3-29] gi|229104747|ref|ZP_04235408.1| Ribonuclease Z [Bacillus cereus Rock3-28] gi|229117638|ref|ZP_04247009.1| Ribonuclease Z [Bacillus cereus Rock1-3] gi|228665817|gb|EEL21288.1| Ribonuclease Z [Bacillus cereus Rock1-3] gi|228678620|gb|EEL32836.1| Ribonuclease Z [Bacillus cereus Rock3-28] gi|228684691|gb|EEL38629.1| Ribonuclease Z [Bacillus cereus Rock3-29] gi|228707163|gb|EEL59360.1| Ribonuclease Z [Bacillus cereus Rock4-18] Length = 307 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 23/118 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG GA + P R S++ + + ERG T + D G Sbjct: 3 FVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F + VY P +K E Sbjct: 45 QILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTKLTVY-GPKGIKQFIE 101 >gi|226322347|ref|ZP_03797865.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] gi|225209269|gb|EEG91623.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] Length = 249 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 28/168 (16%) Query: 51 GSNTT-VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 GS+ T ++VDTG + ++ L + +D +L TH HADHI G+ G F +K Sbjct: 2 GSDRTHLLVDTGISKKRIEEGLKELEIKGKELDGILITHEHADHIQGL----GVF-SRKY 56 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y P ++ + R Y + +++ + + G I+ P Sbjct: 57 EIPIYGTPGTIRGI-------------RDYKNLGKMPEGLYHEIQVDKEFKLGDIDVHPF 103 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+RF +A TD+ + ++E L++L+ +++++ Sbjct: 104 AISHDANEPSGYRFEQDGKKIAVATDLGKYDEYTVENLKDLNAVLLES 151 >gi|32129862|sp|Q49149|PQQB_METEA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Coenzyme PQQ synthesis protein G; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|414591|gb|AAA17879.1| PQQ biosynthesis polypeptide [Methylobacterium extorquens AM1] Length = 299 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 22/138 (15%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTG 61 H ILG A GVP+ C + RT+SS+ +S ER ++++ Sbjct: 2 HVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGER----WLLLNAS 57 Query: 62 PDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA P Sbjct: 58 PDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYATP 112 Query: 113 DCMKHLFESFRYCFKALD 130 + + ++ + A D Sbjct: 113 GILASVSDNRVFDVMAAD 130 >gi|47096232|ref|ZP_00233830.1| lipoprotein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254898882|ref|ZP_05258806.1| hypothetical protein LmonJ_03675 [Listeria monocytogenes J0161] gi|254911629|ref|ZP_05261641.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935955|ref|ZP_05267652.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015377|gb|EAL06312.1| lipoprotein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608543|gb|EEW21151.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589577|gb|EFF97911.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 376 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 103 >gi|315613220|ref|ZP_07888130.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315314782|gb|EFU62824.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 269 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKISSLLAEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 61 HEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|302875633|ref|YP_003844266.1| ComE operon protein [Clostridium cellulovorans 743B] gi|302578490|gb|ADL52502.1| ComE operon protein [Clostridium cellulovorans 743B] Length = 284 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 13/100 (13%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNP-KNRRTRSSLKISR---VSERGSNTTVI 57 K YY F IL + L +TG C NP KN S + + + + + T+ + Sbjct: 5 KVYYKFLILFISSILLFIFLTG----CIKANPDKNIVIFSFIDVDQGDSILINYNGTSTL 60 Query: 58 VDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGI 92 +D+G + Y + +E++ SID ++ THPH DH G+ Sbjct: 61 IDSGSEEYSSNVINYLKKEKIKSIDNLILTHPHEDHYGGM 100 >gi|253577680|ref|ZP_04854986.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842922|gb|EES70964.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 246 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%) Query: 55 TVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYA 110 T+++D G + + + V IDAVL TH H DH+ G++ L R F ++PI +Y Sbjct: 32 TLLIDCGITAPLALHTIGKSVEEIDAVLITHIHGDHVGGLEELAFRRKFGSGRKPI-LYI 90 Query: 111 APDCMKHLFES 121 A + ++ L+E+ Sbjct: 91 AENLVEPLWEN 101 >gi|330813166|ref|YP_004357405.1| hypothetical protein SAR11G3_00191 [Candidatus Pelagibacter sp. IMCC9063] gi|327486261|gb|AEA80666.1| hypothetical protein SAR11G3_00191 [Candidatus Pelagibacter sp. IMCC9063] Length = 41 Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGAC 28 MK Y I+GCGAS GVP GDWG C Sbjct: 1 MKKNY-LQIIGCGASQGVPTPDGDWGNC 27 >gi|331266320|ref|YP_004325950.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326682992|emb|CBZ00609.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 269 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 61 HEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|323705909|ref|ZP_08117480.1| hypothetical protein ThexyDRAFT_1772 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534707|gb|EGB24487.1| hypothetical protein ThexyDRAFT_1772 [Thermoanaerobacterium xylanolyticum LX-11] Length = 303 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 44 ISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +S + R +++VD G +Q L L+ID + +TH HADHI G+ G+ + Sbjct: 20 LSSLILRYGGVSILVDCGEGTQVPLQKLGWGFLNIDTIFFTHYHADHIMGLPGIIYQMIN 79 Query: 102 QKR 104 Q+R Sbjct: 80 QER 82 >gi|322375299|ref|ZP_08049812.1| VicX protein [Streptococcus sp. C300] gi|321279562|gb|EFX56602.1| VicX protein [Streptococcus sp. C300] Length = 269 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLAEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 61 HEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|224499481|ref|ZP_03667830.1| hypothetical protein LmonF1_07182 [Listeria monocytogenes Finland 1988] Length = 376 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 103 >gi|163941883|ref|YP_001646767.1| ribonuclease Z [Bacillus weihenstephanensis KBAB4] gi|229013352|ref|ZP_04170492.1| Ribonuclease Z [Bacillus mycoides DSM 2048] gi|229134951|ref|ZP_04263757.1| Ribonuclease Z [Bacillus cereus BDRD-ST196] gi|229168886|ref|ZP_04296604.1| Ribonuclease Z [Bacillus cereus AH621] gi|254808613|sp|A9VG79|RNZ_BACWK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|163864080|gb|ABY45139.1| ribonuclease Z [Bacillus weihenstephanensis KBAB4] gi|228614616|gb|EEK71723.1| Ribonuclease Z [Bacillus cereus AH621] gi|228648453|gb|EEL04482.1| Ribonuclease Z [Bacillus cereus BDRD-ST196] gi|228747945|gb|EEL97810.1| Ribonuclease Z [Bacillus mycoides DSM 2048] Length = 307 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 23/119 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG GA + P R S++ + + ERG T + D G Sbjct: 2 EFVFLGTGAGV----------------PSKGRNVSAIALQLLEERGQ--TWLFDCGEATQ 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G F + VY P +K E Sbjct: 44 HQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTKLTVY-GPKGIKQFIE 101 >gi|255027665|ref|ZP_05299651.1| hypothetical protein LmonocytFSL_17237 [Listeria monocytogenes FSL J2-003] Length = 343 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 47 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 90 >gi|226357159|ref|YP_002786899.1| metallo-beta-lactamase family protein [Deinococcus deserti VCD115] gi|226319149|gb|ACO47145.1| putative Metallo-beta-lactamase superfamily protein; putative Zinc metallohydrolase, glyoxalase II family [Deinococcus deserti VCD115] Length = 299 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 45 SRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S V E G +++DTG D ++ + LS A+L TH HADH G + Sbjct: 20 SVVVENGEGGALLIDTGLDDAHARKLLRAVESAGLSPSAILNTHSHADH----HGGNAFI 75 Query: 100 LKQKRPIDVYAAP 112 LK+ + VYA P Sbjct: 76 LKKSPELTVYAPP 88 >gi|254827890|ref|ZP_05232577.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284801276|ref|YP_003413141.1| hypothetical protein LM5578_1026 [Listeria monocytogenes 08-5578] gi|284994418|ref|YP_003416186.1| hypothetical protein LM5923_0980 [Listeria monocytogenes 08-5923] gi|258600271|gb|EEW13596.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284056838|gb|ADB67779.1| hypothetical protein LM5578_1026 [Listeria monocytogenes 08-5578] gi|284059885|gb|ADB70824.1| hypothetical protein LM5923_0980 [Listeria monocytogenes 08-5923] Length = 376 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 103 >gi|1093033|prf||2102316B pqqG gene Length = 223 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 22/138 (15%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTG 61 H ILG A GVP+ C + RT+SS+ +S ER ++++ Sbjct: 2 HVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGER----WLLLNAS 57 Query: 62 PDFYMQVL-------REQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA P Sbjct: 58 PDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYATP 112 Query: 113 DCMKHLFESFRYCFKALD 130 + + ++ + A D Sbjct: 113 GILASVSDNRVFDVMAAD 130 >gi|293365510|ref|ZP_06612219.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307703468|ref|ZP_07640410.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|291315878|gb|EFE56322.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307622875|gb|EFO01870.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] Length = 269 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 61 HEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|304316357|ref|YP_003851502.1| ribonuclease Z [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777859|gb|ADL68418.1| ribonuclease Z [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 303 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 44 ISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +S + R +V+VD G +Q L L+IDA+ +TH H DHI G+ G+ + Sbjct: 20 LSSLILRYGGISVLVDCGEGTQVPLQKLGWGFLNIDAIFFTHYHGDHIMGLPGIIYQMIN 79 Query: 102 QKR 104 Q R Sbjct: 80 QDR 82 >gi|16802985|ref|NP_464470.1| hypothetical protein lmo0945 [Listeria monocytogenes EGD-e] gi|224502739|ref|ZP_03671046.1| hypothetical protein LmonFR_09499 [Listeria monocytogenes FSL R2-561] gi|16410347|emb|CAC99023.1| lmo0945 [Listeria monocytogenes EGD-e] Length = 376 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 103 >gi|306825163|ref|ZP_07458505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432599|gb|EFM35573.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 269 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 30/105 (28%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ +G FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILIT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 H H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 61 HEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|15894862|ref|NP_348211.1| ribonuclease Z [Clostridium acetobutylicum ATCC 824] gi|15024538|gb|AAK79551.1|AE007668_5 Metal-dependent hydrolase of the beta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] Length = 313 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 19/87 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG SL P + R +SL IS G + G M+ Sbjct: 10 LLGCGGSL----------------PTSDRNLTSLLISY---NGRKILIDCGEGTQVSMKE 50 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGL 95 + ID + +TH HADH+ G+ GL Sbjct: 51 IAWGFKDIDVICFTHYHADHVMGLTGL 77 >gi|319946570|ref|ZP_08020804.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319746618|gb|EFV98877.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 269 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +DA+L TH H+DHIHG+ L +K +D+YA K + E +Y K D + + Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEATWKAM-EGSKYLGKVDDSQKH 106 >gi|261417831|ref|YP_003251513.1| ribonuclease Z [Geobacillus sp. Y412MC61] gi|297529499|ref|YP_003670774.1| ribonuclease Z [Geobacillus sp. C56-T3] gi|319767357|ref|YP_004132858.1| ribonuclease Z [Geobacillus sp. Y412MC52] gi|261374288|gb|ACX77031.1| ribonuclease Z [Geobacillus sp. Y412MC61] gi|297252751|gb|ADI26197.1| ribonuclease Z [Geobacillus sp. C56-T3] gi|317112223|gb|ADU94715.1| ribonuclease Z [Geobacillus sp. Y412MC52] Length = 307 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R SS+ + + ERG+ T + D G Q+L + I+ + TH H DH+ Sbjct: 13 PAKERNVSSVALQLLDERGA--TWLFDCGEATQHQILHTAIRPRRIEHIFITHLHGDHLF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ V+ P ++ E+ Sbjct: 71 GLPGLLGSRSFQSGETPLTVF-GPKGIRAFVET 102 >gi|27468105|ref|NP_764742.1| hypothetical protein SE1187 [Staphylococcus epidermidis ATCC 12228] gi|251810920|ref|ZP_04825393.1| ribonuclease Z [Staphylococcus epidermidis BCM-HMP0060] gi|282876071|ref|ZP_06284938.1| ribonuclease Z [Staphylococcus epidermidis SK135] gi|41017554|sp|Q8CSG7|RNZ_STAES RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|27315651|gb|AAO04786.1|AE016748_20 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|251805600|gb|EES58257.1| ribonuclease Z [Staphylococcus epidermidis BCM-HMP0060] gi|281295096|gb|EFA87623.1| ribonuclease Z [Staphylococcus epidermidis SK135] gi|329737307|gb|EGG73561.1| ribonuclease Z [Staphylococcus epidermidis VCU028] Length = 306 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN+ + D G Q+LR + ID + TH H DHI G+ G Sbjct: 15 KERNTQSIALNLEPYSNSIWLFDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFES 121 L R + + +P+ + P +++ E+ Sbjct: 75 LLTSRSFQGGENKPLTI-IGPKGIQNYIET 103 >gi|238892579|ref|YP_002917313.1| carbon-phosphorus lyase complex accessory protein [Klebsiella pneumoniae NTUH-K2044] gi|238544895|dbj|BAH61246.1| phosphonate utilization protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 252 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 65/273 (23%), Positives = 101/273 (36%), Gaps = 43/273 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLK--ISRVSERGSNTTVIVDTGPDFYM 66 + G G + VP D AC + RR S + S V S T++ PD Sbjct: 7 LTGTGGAQLVPVFGCDCAACR----RARREESHRRRPCSGVVTFNSAVTLLDAGRPDLME 62 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLFESFR 123 S VL TH H DH+ G+ LR G + P D D +KH Sbjct: 63 H---HPAGSFQQVLLTHYHLDHVQGLFPLRWGVGASIPVYGPPDDAGCDDLLKH------ 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 L D ++ V P V+ N + P+ H ++ + G+ Sbjct: 114 ---PGLLDFSH--TVTPFVMFNLQ----------GLRVTPLPLNHSKL-TFGYLLESAHS 157 Query: 180 NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKN 234 +A+ +D P +SL+ L N +IID + +H L+ ++I Sbjct: 158 RLAWLSDTAGLPDKSLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRSLNQVIGCPR 217 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ILTH+ D M+ P+ +DGM+ + Sbjct: 218 VILTHISHQFDVWMMDNPLPTGFEAGYDGMEIA 250 >gi|41017576|sp|Q97IQ6|RNZ_CLOAB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|325509000|gb|ADZ20636.1| ribonuclease Z [Clostridium acetobutylicum EA 2018] Length = 309 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 19/87 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG SL P + R +SL IS G + G M+ Sbjct: 6 LLGCGGSL----------------PTSDRNLTSLLISY---NGRKILIDCGEGTQVSMKE 46 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGL 95 + ID + +TH HADH+ G+ GL Sbjct: 47 IAWGFKDIDVICFTHYHADHVMGLTGL 73 >gi|221134804|ref|ZP_03561107.1| Hydroxyacylglutathione hydrolase [Glaciecola sp. HTCC2999] Length = 254 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 56 VIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G MQ L EQ L++ AVL TH H DH GI L F Sbjct: 24 VVVDPGDAKPVMQFLNEQQLTLSAVLITHHHPDHTGGIKALTQAF 68 >gi|327440454|dbj|BAK16819.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Solibacillus silvestris StLB046] Length = 313 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 13/126 (10%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R SS+ + ERGS + D G Q+L V ID + TH H DHI Sbjct: 13 PSKERNTSSIAFKLLEERGS--IWLFDCGEATQHQILHTTVKPRKIDKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIE 144 G+ G FL + + +Y + + ++ + L TYP + + IV E Sbjct: 71 GLPGFLSSRSFLGGEDMLTIYGPAGLQQWIEQTLQLSKTHL---TYPIEFVEVKDGIVFE 127 Query: 145 NNDVPI 150 + + Sbjct: 128 DEKFTV 133 >gi|329725436|gb|EGG61919.1| ribonuclease Z [Staphylococcus epidermidis VCU144] Length = 306 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN+ + D G Q+LR + ID + TH H DHI G+ G Sbjct: 15 KERNTQSIALNLEPYSNSIWLFDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFES 121 L R + + +P+ + P +++ E+ Sbjct: 75 LLTSRSFQGGENKPLTI-IGPKGIQNYIET 103 >gi|255952202|ref|XP_002566867.1| Pc24g02300 [Penicillium chrysogenum Wisconsin 54-1255] gi|211904489|emb|CAP87138.1| Pc24g02300 [Penicillium chrysogenum Wisconsin 54-1255] Length = 535 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 18/124 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA----FPAE 193 VN + +D +C+ + GG +E + L +HGRI DVN F Sbjct: 422 VNESTVATHDTALCIAARGGDLEMVRELLRHGRI--------------DVNLRNQWFEDP 467 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ F I+DAL +HFSL SL + + AI + + D +L+ + Sbjct: 468 LVLAVRGGHFSIVDALVGNPRLTHFSLRRSLDLAKDYCIQKAIRSRICDDNTTKKLLERS 527 Query: 254 PSRV 257 P R+ Sbjct: 528 PRRI 531 >gi|57866978|ref|YP_188643.1| AtsA/ElaC family protein [Staphylococcus epidermidis RP62A] gi|293366536|ref|ZP_06613213.1| ribonuclease Z [Staphylococcus epidermidis M23864:W2(grey)] gi|76363382|sp|Q5HP47|RNZ_STAEQ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|57637636|gb|AAW54424.1| AtsA/ElaC family protein [Staphylococcus epidermidis RP62A] gi|291319305|gb|EFE59674.1| ribonuclease Z [Staphylococcus epidermidis M23864:W2(grey)] gi|329735312|gb|EGG71604.1| ribonuclease Z [Staphylococcus epidermidis VCU045] Length = 306 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN+ + D G Q+LR + ID + TH H DHI G+ G Sbjct: 15 KERNTQSIALNLEPYSNSIWLFDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFES 121 L R + + +P+ + P +++ E+ Sbjct: 75 LLTSRSFQGGENKPLTI-IGPKGIQNYIET 103 >gi|212638820|ref|YP_002315340.1| ribonuclease Z [Anoxybacillus flavithermus WK1] gi|254808603|sp|B7GHJ4|RNZ_ANOFW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|212560300|gb|ACJ33355.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 312 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R S++ + + ERG+ T + D G Q+L + I+ + TH H DHI Sbjct: 13 PSKGRNVSAVALQLLEERGA--TWLFDCGEATQHQILHTSIRPRRIERIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL G F + P+ VY P ++ E+ Sbjct: 71 GLPGLLGSRSFQGGETPLFVY-GPAGIRSFVET 102 >gi|150398775|ref|YP_001322542.1| ribonuclease Z [Methanococcus vannielii SB] gi|166991486|sp|A6UN58|RNZ_METVS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150011478|gb|ABR53930.1| ribonuclease Z [Methanococcus vannielii SB] Length = 315 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%) Query: 57 IVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP 112 + D G + Q++ V + I+ + +H H DHI GI GL F +K+P+++Y P Sbjct: 32 LFDCGENTQRQIIFTDVSPMKINNIFISHLHGDHILGIPGLLQSIAFQGRKKPLNIYGPP 91 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + + + + + ++D YP ++ IE+ ++ I Sbjct: 92 ETKEMIKNMLKIGYHSID---YPINIHEASIESPEMIIA 127 >gi|156742955|ref|YP_001433084.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156234283|gb|ABU59066.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 301 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 26/152 (17%) Query: 51 GSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G + VDTG D + L E L + A++ TH HADHI G D Y ++ Sbjct: 26 GDGGAIAVDTGLDKDTGRMLRRALEEAGLRLRAIISTHHHADHIGGND----YLVRNLPD 81 Query: 106 IDVYA----APDCMKHLFESFRYCF-----KALDDRTYPPIVNPI--VIENNDVPICMKS 154 + VYA AP L E AL + P+ +I++N+V I Sbjct: 82 VAVYAPRLEAPFIENPLLEPIYLALGASPPAALRTKWLMAKGVPVDHLIDSNEVDIA--- 138 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 GV I L H + +G F V + D Sbjct: 139 --GVTLEIIALSGH-SLGQIGVAFDGVCFAAD 167 >gi|58581358|ref|YP_200374.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623293|ref|YP_450665.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|75435873|sp|Q5H232|PQQB_XANOR RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|123522451|sp|Q2P4Y6|PQQB_XANOM RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|58425952|gb|AAW74989.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367233|dbj|BAE68391.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 299 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 22/116 (18%) Query: 9 ILGCGASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ A + RRT++S+ +S ER V+++ PDF Sbjct: 5 VLGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADGER----WVLINASPDF 60 Query: 65 YMQVLREQVL---------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 Q+L L I AVL T DHI G+ +R + +P ++A+ Sbjct: 61 RQQILATPALWPQQGLRHSPIKAVLLTSGEIDHIAGLLSMR-----ESQPFALHAS 111 >gi|302874372|ref|YP_003843005.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307691029|ref|ZP_07633475.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302577229|gb|ADL51241.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 338 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 23/195 (11%) Query: 53 NTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N ++++D G + + ++ + + +D V+ THPH DH+ G+D + F +D Sbjct: 107 NNSMLIDAGTNDQKKTVKNYLDTQGITKLDYVVCTHPHKDHVGGMDYIINNF-----QVD 161 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 P+ E+F+ A++ + I P V E + A I A P + Sbjct: 162 KVYMPNVTT-TTETFQDVLVAMEKKGLKSIA-PTVGE----TFNLGDAKCTILA-PNSES 214 Query: 168 HGRISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 + I+ + +FGN ++ D +A E + + D LK G H S + S++ Sbjct: 215 YEDINDYSIVMKLQFGNTSFMFDGDAQKLSEKEIIAKGFDVKADVLKIGHHGSDSASSKT 274 Query: 224 LKKIELINPKNAILT 238 ++ + PK A+++ Sbjct: 275 Y--LDAVKPKYAVIS 287 >gi|197286797|ref|YP_002152669.1| hypothetical protein PMI2968 [Proteus mirabilis HI4320] gi|194684284|emb|CAR45839.1| conserved hypothetical protein [Proteus mirabilis HI4320] Length = 273 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 60/294 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG AS G+P C K+ RT SS + + +++D P F Sbjct: 5 FLGTAASEGIPNPFCRCEHCLKARKLAGKDIRTHSSAIVDDI--------MLIDVSPTFS 56 Query: 66 MQVLRE--QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVY----AAPDCMK 116 Q++R+ +++L+TH H DH + + GY + P+ ++ A C++ Sbjct: 57 YQLMRDGMDATHFESLLFTHTHPDHFNVGELFSRMEGYGFEINHPLHIFGNDRAINGCIE 116 Query: 117 HL--FESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVIEAIPILQQHGRI 171 L + R+ F L + + +E N P+ A + + +++ G+ Sbjct: 117 VLPGYTKERFAFHCL--------IPFVTVERNGYKITPLLANHAKWELCYVYHIEKDGKA 168 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHS-----SHFSLSESL 224 + Y D FPA + + L+N LD ++ + GL+ +H SL Sbjct: 169 ---------IFYGHDSGWFPALTWQWLENKPLDIVVFEC-TYGLNGKDRTDNHMSLETVF 218 Query: 225 KKIELINPKNAI----------LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 E + + + ++H L +++ P + A+DG+ + Sbjct: 219 AAKEKLQQQGCLHQATQIVVSHISHSGKLLHHELETVCAPHHIRVAYDGLTLET 272 >gi|194875152|ref|XP_001973539.1| GG16137 [Drosophila erecta] gi|190655322|gb|EDV52565.1| GG16137 [Drosophila erecta] Length = 348 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V + V+ P+ ++ L+EQ L++ VL TH H DH G + L + K+ + Sbjct: 107 VDTKTREAAVVDPVEPELVIKTLQEQQLTLSKVLTTHHHWDHAGGNEKLVKLWEKE---L 163 Query: 107 DVYAAPD 113 DVY D Sbjct: 164 DVYGGDD 170 >gi|15895540|ref|NP_348889.1| metallo-beta-lactamase superfamily Zn-dependent hydrolase [Clostridium acetobutylicum ATCC 824] gi|15025276|gb|AAK80229.1|AE007728_8 Predicted Zn-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] gi|325509688|gb|ADZ21324.1| Zn-dependent hydrolase of metallo-beta-lactamase superfamily [Clostridium acetobutylicum EA 2018] Length = 199 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%) Query: 49 ERGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + SN +V++D G P ++ ++ ++ VL TH HADH + LK++ + Sbjct: 20 DEKSNESVVIDPGDAPQAILEAFKDTETNLKFVLLTHGHADHTAAVAE-----LKKEYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCF 126 DVY D K L E+ Y F Sbjct: 75 DVYMNKDDCK-LIENGEYMF 93 >gi|227551356|ref|ZP_03981405.1| ribonuclease Z [Enterococcus faecium TX1330] gi|257896027|ref|ZP_05675680.1| ribonuclease Z [Enterococcus faecium Com12] gi|257898655|ref|ZP_05678308.1| ribonuclease Z [Enterococcus faecium Com15] gi|293378801|ref|ZP_06624958.1| ribonuclease Z [Enterococcus faecium PC4.1] gi|293570538|ref|ZP_06681593.1| ribonuclease Z [Enterococcus faecium E980] gi|227179475|gb|EEI60447.1| ribonuclease Z [Enterococcus faecium TX1330] gi|257832592|gb|EEV59013.1| ribonuclease Z [Enterococcus faecium Com12] gi|257836567|gb|EEV61641.1| ribonuclease Z [Enterococcus faecium Com15] gi|291609484|gb|EFF38751.1| ribonuclease Z [Enterococcus faecium E980] gi|292642594|gb|EFF60747.1| ribonuclease Z [Enterococcus faecium PC4.1] Length = 313 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+LR + I + TH H DHI Sbjct: 13 PAKHRNVTSIALKLLDER--NEVWLFDCGEGTQMQILRTTIRPRKIGKIFITHLHGDHIF 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGDTPLEIYG 92 >gi|73662558|ref|YP_301339.1| hypothetical protein SSP1249 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642642|sp|Q49XV1|RNZ_STAS1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|72495073|dbj|BAE18394.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 306 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 16/146 (10%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN + D G Q+L + +D + TH H DHI G+ G Sbjct: 15 KERNTQAIALNLEPYSNNIWLFDVGEGTQHQILHHSIKLGKVDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L R + + +P+ + ++ + R L+ YP + I IEN+ + Sbjct: 75 LLTSRSFQGGEGKPLTLIGPKGIKAYIETTLRLSESKLN---YP--ITYIEIENH---LS 126 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFR 177 ++ G +EA + HG I S G+R Sbjct: 127 YQNNGFNVEA--HMLNHG-IPSFGYR 149 >gi|242242776|ref|ZP_04797221.1| ribonuclease Z [Staphylococcus epidermidis W23144] gi|242233912|gb|EES36224.1| ribonuclease Z [Staphylococcus epidermidis W23144] gi|319400845|gb|EFV89064.1| ribonuclease Z [Staphylococcus epidermidis FRI909] Length = 306 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 6/90 (6%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN+ + D G Q+LR + ID + TH H DHI G+ G Sbjct: 15 KERNTQSIALNLEPYSNSIWLFDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFES 121 L R + + +P+ + P +++ E+ Sbjct: 75 LLTSRSFQGGENKPLTI-IGPKGIQNYIET 103 >gi|257887532|ref|ZP_05667185.1| ribonuclease Z [Enterococcus faecium 1,141,733] gi|257823586|gb|EEV50518.1| ribonuclease Z [Enterococcus faecium 1,141,733] Length = 313 Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+LR + I + TH H DHI Sbjct: 13 PAKHRNVTSIALKLLDER--NEVWLFDCGEGTQMQILRTTIRPRKIGKIFITHLHGDHIF 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGDTPLEIYG 92 >gi|312868316|ref|ZP_07728516.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] gi|311096061|gb|EFQ54305.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] Length = 269 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 +DA+L TH H+DHIHG+ L +K +D+YA K + E +Y K D Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEATWKAM-EGTKYLGKVDD 102 >gi|257878181|ref|ZP_05657834.1| ribonuclease Z [Enterococcus faecium 1,230,933] gi|257881036|ref|ZP_05660689.1| ribonuclease Z [Enterococcus faecium 1,231,502] gi|257884697|ref|ZP_05664350.1| ribonuclease Z [Enterococcus faecium 1,231,501] gi|257889621|ref|ZP_05669274.1| ribonuclease Z [Enterococcus faecium 1,231,410] gi|257892438|ref|ZP_05672091.1| ribonuclease Z [Enterococcus faecium 1,231,408] gi|260559227|ref|ZP_05831413.1| ribonuclease Z [Enterococcus faecium C68] gi|261207760|ref|ZP_05922445.1| ribonuclease Z [Enterococcus faecium TC 6] gi|289565835|ref|ZP_06446277.1| ribonuclease Z [Enterococcus faecium D344SRF] gi|293553444|ref|ZP_06674072.1| ribonuclease Z [Enterococcus faecium E1039] gi|293560345|ref|ZP_06676840.1| ribonuclease Z [Enterococcus faecium E1162] gi|293569803|ref|ZP_06680890.1| ribonuclease Z [Enterococcus faecium E1071] gi|294614050|ref|ZP_06693979.1| ribonuclease Z [Enterococcus faecium E1636] gi|294617214|ref|ZP_06696864.1| ribonuclease Z [Enterococcus faecium E1679] gi|294620548|ref|ZP_06699849.1| ribonuclease Z [Enterococcus faecium U0317] gi|314939158|ref|ZP_07846415.1| ribonuclease Z [Enterococcus faecium TX0133a04] gi|314943927|ref|ZP_07850644.1| ribonuclease Z [Enterococcus faecium TX0133C] gi|314948037|ref|ZP_07851440.1| ribonuclease Z [Enterococcus faecium TX0082] gi|314953288|ref|ZP_07856219.1| ribonuclease Z [Enterococcus faecium TX0133A] gi|314993367|ref|ZP_07858734.1| ribonuclease Z [Enterococcus faecium TX0133B] gi|314994953|ref|ZP_07860074.1| ribonuclease Z [Enterococcus faecium TX0133a01] gi|257812409|gb|EEV41167.1| ribonuclease Z [Enterococcus faecium 1,230,933] gi|257816694|gb|EEV44022.1| ribonuclease Z [Enterococcus faecium 1,231,502] gi|257820535|gb|EEV47683.1| ribonuclease Z [Enterococcus faecium 1,231,501] gi|257825981|gb|EEV52607.1| ribonuclease Z [Enterococcus faecium 1,231,410] gi|257828817|gb|EEV55424.1| ribonuclease Z [Enterococcus faecium 1,231,408] gi|260074984|gb|EEW63300.1| ribonuclease Z [Enterococcus faecium C68] gi|260078143|gb|EEW65849.1| ribonuclease Z [Enterococcus faecium TC 6] gi|289162378|gb|EFD10236.1| ribonuclease Z [Enterococcus faecium D344SRF] gi|291587551|gb|EFF19428.1| ribonuclease Z [Enterococcus faecium E1071] gi|291593096|gb|EFF24676.1| ribonuclease Z [Enterococcus faecium E1636] gi|291596527|gb|EFF27770.1| ribonuclease Z [Enterococcus faecium E1679] gi|291599785|gb|EFF30789.1| ribonuclease Z [Enterococcus faecium U0317] gi|291602321|gb|EFF32545.1| ribonuclease Z [Enterococcus faecium E1039] gi|291605690|gb|EFF35129.1| ribonuclease Z [Enterococcus faecium E1162] gi|313590810|gb|EFR69655.1| ribonuclease Z [Enterococcus faecium TX0133a01] gi|313592151|gb|EFR70996.1| ribonuclease Z [Enterococcus faecium TX0133B] gi|313594670|gb|EFR73515.1| ribonuclease Z [Enterococcus faecium TX0133A] gi|313597431|gb|EFR76276.1| ribonuclease Z [Enterococcus faecium TX0133C] gi|313641538|gb|EFS06118.1| ribonuclease Z [Enterococcus faecium TX0133a04] gi|313645517|gb|EFS10097.1| ribonuclease Z [Enterococcus faecium TX0082] Length = 313 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S+ + + ER N + D G MQ+LR + I + TH H DHI Sbjct: 13 PAKHRNVTSIALKLLDER--NEVWLFDCGEGTQMQILRTTIRPRKIGKIFITHLHGDHIF 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGDTPLEIYG 92 >gi|261410062|ref|YP_003246303.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|329925066|ref|ZP_08280010.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|261286525|gb|ACX68496.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] gi|328940185|gb|EGG36517.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 267 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ + ID +L TH H+DHI G+ + +K Sbjct: 20 RNEDTTLLIDAGLSARRIDELLKEREMMGEEIDGILVTHEHSDHIRGLGA-----VARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + +S + N IV+E+++V G + P Sbjct: 75 NLPIYANEKTWEAMSKSLGKIAEE----------NRIVLESHEVKDF-----GTLRVEPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H + +G+ F + TD+ + + L D L+++A Sbjct: 120 EISHDAAAPVGYCFYDGDEKLGVATDLGYVSDKVKKALDGSDVLVLEANHDIEMLRMGRY 179 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 L + H S+ S ++L ++ + K L H+ +D Sbjct: 180 PWNTKRRILGDMGHLSNNSAGDALSELLTGDTKRTYLAHLSLD 222 >gi|255658234|ref|ZP_05403643.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] gi|260849544|gb|EEX69551.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] Length = 330 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + TV++DT F ++ + V ID V+ THPHADHI G+D Sbjct: 60 AEQTVLIDTSDVDERDKFKRELDKAGVKKIDKVILTHPHADHIGGMD 106 >gi|253577655|ref|ZP_04854963.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842947|gb|EES70987.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 236 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 27/45 (60%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 N +I+D G + + R + L I+A+L TH H DHI G+D +R Sbjct: 52 ENRAIIIDPGSNPGPLLRRIEGLEIEAILLTHAHFDHIGGLDQIR 96 >gi|120555210|ref|YP_959561.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120325059|gb|ABM19374.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 251 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 110/274 (40%), Gaps = 47/274 (17%) Query: 8 TILGCGASLGVPRITGDWGAC--DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G + GVPR + AC P+ +R S I R +++D G Sbjct: 4 TFTGTAGAGGVPRYGCECAACVRARQQPEYQRRPCSALIETDKVR-----LLLDAG---L 55 Query: 66 MQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 M + R ++A++ TH HADH+ G+ LR + + P+ PD L+++ Sbjct: 56 MDIHDRFPAGRLNAIVLTHFHADHVQGLFHLR-WGKGAQLPVFCPPDPDGCADLYKN--- 111 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-------SSLGFR 177 + D + P I G ++ P+ H +I ++ G R Sbjct: 112 --SGILDFQHLEAFRPFEI-------------GDLKITPLPLNHSKITYGYAIETASGHR 156 Query: 178 FGNVAYCTDVNAFPAESLEKLQN---LDFLIIDALKNGLHS--SHFSLSESLKKIELINP 232 F AY TD P S+ L++ + + +HS +H + +L I+ + P Sbjct: 157 F---AYLTDTVGLPENSMHFLKSWGPFSMALDCSYPPKVHSPANHNDYNLALDIIDNVRP 213 Query: 233 KNAILTHMHVDLDYDMVLKST--PSRVVPAFDGM 264 + + LTH+ +LD + + S + A DG+ Sbjct: 214 QKSWLTHLSHELDLWRIKNNCKLESNLAWAADGL 247 >gi|255019108|ref|ZP_05291234.1| hypothetical protein LmonF_17636 [Listeria monocytogenes FSL F2-515] Length = 128 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E V ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNAD 103 >gi|290580115|ref|YP_003484507.1| hypothetical protein SmuNN2025_0589 [Streptococcus mutans NN2025] gi|254997014|dbj|BAH87615.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 267 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 M + +V +DA+L TH H DHIHG+ L +K +DVYA Sbjct: 44 MAEIDRKVDDVDAILVTHEHKDHIHGVG-----VLARKYGLDVYA 83 >gi|24379905|ref|NP_721860.1| hypothetical protein SMU.1515 [Streptococcus mutans UA159] gi|24377884|gb|AAN59166.1|AE014984_1 conserved hypothetical protein CovX (VicX) [Streptococcus mutans UA159] Length = 267 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 M + +V +DA+L TH H DHIHG+ L +K +DVYA Sbjct: 44 MAEIDRKVDDVDAILVTHEHKDHIHGVG-----VLARKYGLDVYA 83 >gi|302024079|ref|ZP_07249290.1| metallo-beta-lactamase superfamily protein [Streptococcus suis 05HAS68] gi|330832447|ref|YP_004401272.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] gi|329306670|gb|AEB81086.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] Length = 267 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 IDA+L TH H+DHIHGI L +K +D+YA Sbjct: 54 IDAILVTHEHSDHIHGIG-----VLARKYGMDIYA 83 >gi|229916278|ref|YP_002884924.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229467707|gb|ACQ69479.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 205 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 5/47 (10%) Query: 53 NTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 T V++D G P F+ + R LS AVL TH H DHI GID LR Sbjct: 22 GTVVVIDPGTDDPRFFDTIERFGTLS--AVLLTHAHFDHIGGIDALR 66 >gi|255938888|ref|XP_002560214.1| Pc14g02210 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584835|emb|CAP74362.1| Pc14g02210 [Penicillium chrysogenum Wisconsin 54-1255] Length = 464 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 18/124 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA----FPAE 193 VN + +D +C+ + GG ++ + L +HGRI DVN F Sbjct: 351 VNESTVATHDTALCIAARGGDLDMVRELLRHGRI--------------DVNLRNQWFEDP 396 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ F I+DAL +HFSL SL + + AI + + D +LK + Sbjct: 397 LMLAVRGGHFSIVDALVANPRLTHFSLRRSLDLAKDYCIQKAIRSRICDDNTTKKLLKRS 456 Query: 254 PSRV 257 P R+ Sbjct: 457 PRRI 460 >gi|150015910|ref|YP_001308164.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902375|gb|ABR33208.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 293 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 21/196 (10%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +N +++D+GP + L + +D V+ THPH DHI +D + + I Sbjct: 64 NNKNLLIDSGPKSDRRKLFNYLSGLNLNKLDYVIATHPHEDHIGNMDDIIKTY-----SI 118 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + +P ++ +SF AL D+ + V++NN I + V P Sbjct: 119 GTFYSPK-VESTTKSFEDMVDALKDKN----LKVHVLKNNGNSIDLGENTKVNVFSPNKD 173 Query: 167 QHGRISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + +++ + ++GN ++ +A E L N + + D LK G H S S S+ Sbjct: 174 FYDNLNNYSPVIKIQYGNTSFLFTGDAEKEVEKEILNNNEDISADVLKVGHHGSSTSTSK 233 Query: 223 SLKKIELINPKNAILT 238 ++ +NP A+++ Sbjct: 234 DF--LKKVNPSIAVIS 247 >gi|224543293|ref|ZP_03683832.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] gi|224523826|gb|EEF92931.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] Length = 203 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +T VI+D G + MQ + L + +L TH H DHI ++ L+ Y+ DVY Sbjct: 20 GHTCVIIDPGDEANHIMQEIENDHLEVKGILVTHGHFDHIGAVNELKAYY-----HTDVY 74 Query: 110 AAPD 113 A D Sbjct: 75 ATKD 78 >gi|223932687|ref|ZP_03624686.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|223898657|gb|EEF65019.1| beta-lactamase domain protein [Streptococcus suis 89/1591] Length = 267 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 IDA+L TH H+DHIHGI L +K +D+YA Sbjct: 54 IDAILVTHEHSDHIHGIG-----VLARKYGMDIYA 83 >gi|146319011|ref|YP_001198723.1| beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|146321221|ref|YP_001200932.1| beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|253752078|ref|YP_003025219.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253753903|ref|YP_003027044.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253755222|ref|YP_003028362.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|145689817|gb|ABP90323.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 05ZYH33] gi|145692027|gb|ABP92532.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 98HAH33] gi|251816367|emb|CAZ51998.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251817686|emb|CAZ55434.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251820149|emb|CAR46486.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|292558661|gb|ADE31662.1| Beta-lactamase-like protein [Streptococcus suis GZ1] gi|319758445|gb|ADV70387.1| beta-lactamase superfamily hydrolase [Streptococcus suis JS14] Length = 267 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 IDA+L TH H+DHIHGI L +K +D+YA Sbjct: 54 IDAILVTHEHSDHIHGIG-----VLARKYGMDIYA 83 >gi|91774034|ref|YP_566726.1| ribonuclease Z [Methanococcoides burtonii DSM 6242] gi|91713049|gb|ABE52976.1| Ribonuclease Z [Methanococcoides burtonii DSM 6242] Length = 305 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 25/107 (23%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G SL P R S++ ++R E ++ D G Q Sbjct: 5 TFLGTGGSL----------------PTTNRNPSAIMLNREGE-----LIMFDCGEGAQQQ 43 Query: 68 VLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYA 110 ++R + ++++ ++ TH HADHI GI GL Q R P+ +Y Sbjct: 44 MMRAKTGMMNLSSIFITHFHADHILGIPGLVQTMSFQGRTEPLTIYG 90 >gi|313618091|gb|EFR90200.1| ribonuclease Z [Listeria innocua FSL S4-378] Length = 306 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G QVLR + LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQVLRSHIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|326779417|ref|ZP_08238682.1| ComEC/Rec2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326659750|gb|EGE44596.1| ComEC/Rec2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 805 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ G LRG Sbjct: 611 GEGTGVVVDAGPDPRAVDRCLRDLAVTRVPLVVLTHFHADHVRGLPGVLRG 661 >gi|313127680|ref|YP_004037950.1| rnase z [Halogeometricum borinquense DSM 11551] gi|312294045|gb|ADQ68505.1| RNAse Z [Halogeometricum borinquense DSM 11551] Length = 311 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHG 91 P R S+ ++R ER ++ D G Q++R ++ + TH H DH+ G Sbjct: 15 PTTERGPSAFLVNRDGER-----LLFDCGEGTQRQMMRFGTGFTVSHLFVTHLHGDHVLG 69 Query: 92 IDGL--RGYFLKQKRPIDVYAAPDCMKHL 118 I GL F ++ PI ++A P +HL Sbjct: 70 IPGLIQTWDFNDREEPIAIHAPPGSKRHL 98 >gi|300764154|ref|ZP_07074149.1| hypothetical protein LMHG_10128 [Listeria monocytogenes FSL N1-017] gi|300515144|gb|EFK42196.1| hypothetical protein LMHG_10128 [Listeria monocytogenes FSL N1-017] Length = 376 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|56963812|ref|YP_175543.1| ribonuclease Z [Bacillus clausii KSM-K16] gi|76363375|sp|Q5WGC3|RNZ_BACSK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|56910055|dbj|BAD64582.1| ribonuclease Z [Bacillus clausii KSM-K16] Length = 312 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P +R S+L I R ER + T + D G Q L + +++A+ TH H DHI Sbjct: 13 PAKKRNVSALAI-RFLER-NGTVWLFDCGEATQHQFLHSPLSLAAVEAIFITHLHGDHIL 70 Query: 91 GIDGLRG--YFLKQKRPIDVY 109 G+ GL F + P+D+Y Sbjct: 71 GLPGLLSSRSFQGAETPLDIY 91 >gi|182677185|ref|YP_001831331.1| beta-lactamase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633068|gb|ACB93842.1| beta-lactamase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 403 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 25/159 (15%) Query: 25 WGACDPTNPKNRRTRSSLKISRV---SERGSNTTVIVDTG-----PDFYMQVLREQVLSI 76 WG P P S +S V S +G ++D G + +Q+L Q I Sbjct: 101 WG-ISPDYPPGPTLASEFGLSMVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEI 159 Query: 77 DAVLYTHPHADHIHGIDG-LRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 DA++ +H H DH G+ G LR Y LK K P V DC +C + + T Sbjct: 160 DALVLSHGHYDHFGGLAGFLRQYKDQLKPKLPFYV-GGEDC---------FCAR---EWT 206 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 PP+ + + + K + +E ++ HG IS Sbjct: 207 APPVKGNFGVIDREALAAAKLSVTAMEQPALVADHGFIS 245 >gi|330445179|ref|ZP_08308831.1| hydroxyacylglutathione hydrolase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489370|dbj|GAA03328.1| hydroxyacylglutathione hydrolase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 252 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%) Query: 49 ERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + N V+VD G P F + L + L++DA+L TH H+DHI GI L+ F Sbjct: 19 QNKENHCVVVDPGDATPVF--EALEKNNLTLDAILITHHHSDHIGGISELKRRF 70 >gi|16801150|ref|NP_471418.1| hypothetical protein lin2084 [Listeria innocua Clip11262] gi|41017573|sp|Q92A38|RNZ_LISIN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|16414585|emb|CAC97314.1| lin2084 [Listeria innocua Clip11262] Length = 306 Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G QVLR + LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQVLRSHIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|226223563|ref|YP_002757670.1| hypothetical protein Lm4b_00965 [Listeria monocytogenes Clip81459] gi|254931328|ref|ZP_05264687.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|225876025|emb|CAS04731.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293582878|gb|EFF94910.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|328475418|gb|EGF46187.1| hypothetical protein LM220_04196 [Listeria monocytogenes 220] Length = 376 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|149181631|ref|ZP_01860124.1| ribonuclease Z [Bacillus sp. SG-1] gi|148850609|gb|EDL64766.1| ribonuclease Z [Bacillus sp. SG-1] Length = 307 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R +S+ + + ERGS + D G Q+L + I+ + TH H DHI Sbjct: 13 PAKSRNVTSIALKLLEERGS--VWLFDCGEATQHQILHTSLKPRKIEKIFITHLHGDHIF 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAP 112 G+ GL G F + + VY P Sbjct: 71 GLPGLLGSRSFQGGETALTVYGPP 94 >gi|255023217|ref|ZP_05295203.1| hypothetical protein LmonocyFSL_06695 [Listeria monocytogenes FSL J1-208] Length = 376 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|46907177|ref|YP_013566.1| putative lipoprotein [Listeria monocytogenes str. 4b F2365] gi|46880444|gb|AAT03743.1| putative lipoprotein [Listeria monocytogenes serotype 4b str. F2365] Length = 376 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|47093856|ref|ZP_00231599.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858] gi|254823784|ref|ZP_05228785.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|47017765|gb|EAL08555.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858] gi|293593006|gb|EFG00767.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 376 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|254852438|ref|ZP_05241786.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258605747|gb|EEW18355.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 356 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|182438770|ref|YP_001826489.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467286|dbj|BAG21806.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 853 Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ G LRG Sbjct: 617 GEGTGVVVDAGPDPRAVDRCLRDLAVTRVPLVVLTHFHADHVRGLPGVLRG 667 >gi|318081063|ref|ZP_07988395.1| hypothetical protein SSA3_31273 [Streptomyces sp. SA3_actF] Length = 503 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGP--DFYMQVL-REQVLSIDAVLYTHPHADHIHGIDG-LRG 97 G+ T V+VD GP D L R V + VL +H HADH+ G++G LRG Sbjct: 388 GAGTAVVVDAGPEPDRVAGCLDRLGVRRVPLVLLSHFHADHVAGLEGVLRG 438 >gi|315426584|dbj|BAJ48213.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 218 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 47 VSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 V + + VI+D G D ++ + L+E+ L ++AV TH H DH+ +D L+ Sbjct: 20 VYDEETREAVIIDAGDDAWLLLETLQERRLRVNAVYATHGHFDHVMAVDDLK 71 >gi|313609669|gb|EFR85171.1| late competence protein [Listeria monocytogenes FSL F2-208] Length = 376 Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKESNIKKIDLLLLTHPHADHIGNAD 103 >gi|325958847|ref|YP_004290313.1| metal-dependent hydrolase [Methanobacterium sp. AL-21] gi|325330279|gb|ADZ09341.1| metal-dependent hydrolase [Methanobacterium sp. AL-21] Length = 258 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 14/113 (12%) Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS--SHFSLS 221 HG ++GF+ V+Y +D P L+ + +D LI +++G H S+ Sbjct: 133 HGDPKAVGFKISGPDLTVSYTSDTEYTPDLHLDH-KGVDVLIASIIRSGSERIRGHMSVD 191 Query: 222 ESLKKIELINPKNAILTHMHV-------DLDYDMVLKSTPSRVVPAFDGMQFS 267 + + I + PK AI+TH+ + + + V K T + + A DGM+ Sbjct: 192 DFITLINEVKPKLAIMTHLGMKFIMESPEREAQRVTKETGVKTLAARDGMKIE 244 >gi|313623068|gb|EFR93349.1| ribonuclease Z [Listeria innocua FSL J1-023] Length = 306 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G QVLR + LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQVLRSHIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|257388586|ref|YP_003178359.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257170893|gb|ACV48652.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 191 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 TT +VD G DF + +R V ID V+ TH H DH+ +D +R F Sbjct: 21 GETTTLVDVGNDFDVVSEVRAVVDEIDQVVLTHTHRDHVGTLDAVREAF 69 >gi|254173232|ref|ZP_04879905.1| ATP-binding protein phnp [Thermococcus sp. AM4] gi|214032641|gb|EEB73470.1| ATP-binding protein phnp [Thermococcus sp. AM4] Length = 255 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G+ G P+ C NP RRTR SL +VD PD + Sbjct: 5 ILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYFE---------GTLVDPSPDLHY 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + R ++ VL TH H DH+ G+ L+ Sbjct: 56 HLERLN-REVEQVLITHGHFDHVFGLPELQ 84 >gi|315425048|dbj|BAJ46721.1| metallo-beta-lactamase family protein [Candidatus Caldiarchaeum subterraneum] Length = 218 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Query: 47 VSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 V + + VI+D G D ++ + L+E+ L ++AV TH H DH+ +D L+ Sbjct: 20 VYDEETREAVIIDAGDDAWLLLETLQERRLRVNAVYATHGHFDHVMAVDDLK 71 >gi|307570485|emb|CAR83664.1| lipoprotein, putative [Listeria monocytogenes L99] Length = 376 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|254832088|ref|ZP_05236743.1| hypothetical protein Lmon1_12099 [Listeria monocytogenes 10403S] gi|290893496|ref|ZP_06556480.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556997|gb|EFD90527.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 376 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKESNIKKIDLLLLTHPHADHIGNAD 103 >gi|315281652|ref|ZP_07870230.1| late competence protein [Listeria marthii FSL S4-120] gi|313614701|gb|EFR88267.1| late competence protein [Listeria marthii FSL S4-120] Length = 376 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|227355012|ref|ZP_03839423.1| carbon-phosphorus lyase complex accessory protein [Proteus mirabilis ATCC 29906] gi|227164799|gb|EEI49646.1| carbon-phosphorus lyase complex accessory protein [Proteus mirabilis ATCC 29906] Length = 273 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 58/294 (19%), Positives = 112/294 (38%), Gaps = 60/294 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG AS G+P C K+ RT SS + + +++D P F Sbjct: 5 FLGTAASEGIPNPFCRCEHCLKARKLAGKDIRTHSSAIVDDI--------MLIDVSPTFS 56 Query: 66 MQVLRE--QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVY----AAPDCMK 116 Q++R+ +++L+TH H DH + + GY K P+ ++ A C++ Sbjct: 57 YQLMRDGMDATHFESLLFTHTHPDHFNVGELFSRMEGYGFKINHPLHIFGNDRAINGCIE 116 Query: 117 HL--FESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVIEAIPILQQHGRI 171 L + R+ F L + + +E N P+ A + + +++ G+ Sbjct: 117 VLPGYTKERFAFHCL--------IPFVTVERNGYKITPLLANHAKWELCYVYHIEKDGKA 168 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHS-----SHFSLSESL 224 + Y D FP + + L+N LD ++ + GL+ +H SL Sbjct: 169 ---------IFYGHDSGWFPELTWQWLENKPLDIVVFEC-TYGLNGKDRTDNHMSLETVF 218 Query: 225 KKIELINPKNAI----------LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 E + + + ++H L +++ P + A+DG+ + Sbjct: 219 AAKEKLQQQGCLHQATQIVVSHISHSGKLLHHELETVCAPHHIRVAYDGLTLET 272 >gi|21483316|gb|AAM52633.1| GH20064p [Drosophila melanogaster] Length = 324 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 20/88 (22%) Query: 36 RRTRSSLKI-----SRVSERGSNT--------TVIVDTGPDFYMQ-------VLREQVLS 75 R T S ++I S ++ +G+NT +++DTG + Q VL+++ S Sbjct: 41 RLTSSVIRILGCNPSAMTLQGTNTYLLGSGSRRILIDTGDEDVPQYIAHLGDVLQQEKAS 100 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ID +L TH H DH+ G+ + G L +K Sbjct: 101 IDTILLTHWHHDHVGGVKSIVGTKLAEK 128 >gi|328720986|ref|XP_001946795.2| PREDICTED: ribonuclease Z, mitochondrial-like [Acyrthosiphon pisum] Length = 804 Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 120/293 (40%), Gaps = 66/293 (22%) Query: 19 PRITG-DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR------- 70 P+IT G+C P+ K R T L + G N V++D+G Y Q++R Sbjct: 491 PKITFLGTGSCIPS--KTRNTSGILMYT-----GENECVLLDSGEGTYGQLVRHFGLTGA 543 Query: 71 EQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQK--------RPIDVYAAPDCMKHLFES 121 E VLS + A+ +H HADH G+ G+ K K +P+ + A M L Sbjct: 544 ETVLSDLKAIYVSHLHADHHIGLIGILSVRQKMKANKLFKLNQPVYLLAPVQIMTWL--- 600 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS--------- 172 DR + + I +N + + +S+ + I L + +S Sbjct: 601 ------NFYDRRFAELSEEFQIVSN-LDLDFESSTKL--RIKDLLKQTNMSDIETTLVRH 651 Query: 173 ---SLGFRFGN-----VAYCTDVNAFPAESLEKL-QNLDFLIIDA------LKNGLHSSH 217 + G F + V Y D P +SL KL +N + LI +A + H Sbjct: 652 CPNAFGVSFTHINGWKVTYSGD--TMPCDSLVKLGKNSNLLIHEATMEDQLVSEARRKMH 709 Query: 218 FSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ++S+++ + +N K ILTH + + Y M PS V AFD M+ + Sbjct: 710 STMSQAINIGKKMNAKFTILTHFSQRYAKIPY-MPNNDLPSNVGIAFDNMEIA 761 >gi|217964955|ref|YP_002350633.1| late competence protein [Listeria monocytogenes HCC23] gi|217334225|gb|ACK40019.1| late competence protein [Listeria monocytogenes HCC23] Length = 349 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|152978857|ref|YP_001344486.1| hydroxyacylglutathione hydrolase [Actinobacillus succinogenes 130Z] gi|189041216|sp|A6VNK4|GLO2_ACTSZ RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|150840580|gb|ABR74551.1| Hydroxyacylglutathione hydrolase [Actinobacillus succinogenes 130Z] Length = 233 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 LRE +++AVL TH H DH+ G+ + YF + VY +C Sbjct: 38 LRENKFAVEAVLLTHKHDDHVGGVAAFKRYFPD----VPVYGPQEC 79 >gi|269213758|ref|ZP_06158159.1| UDP-2,3-diacylglucosamine hydrolase [Neisseria cinerea ATCC 14685] gi|269145296|gb|EEZ71714.1| UDP-2,3-diacylglucosamine hydrolase [Neisseria cinerea ATCC 14685] Length = 265 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNT--TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIH 90 P RRTR + KI RVS+ G I+D F Q +R + + +++ H H +HIH Sbjct: 172 PLRRRTRLAAKIRRVSKMGKQVKPADIMDVNASFTAQQVR--AFNAERLIHGHTHREHIH 229 Query: 91 GIDGL 95 +G Sbjct: 230 HENGF 234 >gi|213969681|ref|ZP_03397816.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] gi|301384797|ref|ZP_07233215.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato Max13] gi|302060717|ref|ZP_07252258.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato K40] gi|302131945|ref|ZP_07257935.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925489|gb|EEB59049.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] Length = 252 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 34/166 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G R L + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAASQLSAILVTHEHADHVHGVG-----LLSRRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P V ++ + I G ++ + Sbjct: 75 PVYLSSGTLRGMRK--------------PVEVAGLLAGGESLQI------GALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + F F N TD+ ++ + L++ Q LD L+I+A Sbjct: 115 AHDALEPTQFVFSNGTRRFGLLTDLGSYCSNILQRYQGLDALMIEA 160 >gi|37523688|ref|NP_927065.1| hypothetical protein gvip548 [Gloeobacter violaceus PCC 7421] gi|41017535|sp|Q7NDW3|RNZ_GLOVI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|35214693|dbj|BAC92060.1| ycf56 [Gloeobacter violaceus PCC 7421] Length = 317 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Query: 57 IVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA 111 + D G QVLR ++ ++ V +TH H DH+ G+ GL R P+ +Y Sbjct: 34 LFDCGEGTQHQVLRTPLRLSQLEKVFFTHLHGDHLFGLVGLLASRALGSAGTTPVKLYGP 93 Query: 112 PDCMKHLFESFRY 124 P +++ + RY Sbjct: 94 PGLQEYVRATLRY 106 >gi|291086652|ref|ZP_06356354.2| phosphonate metabolism protein PhnP [Citrobacter youngae ATCC 29220] gi|291067342|gb|EFE05451.1| phosphonate metabolism protein PhnP [Citrobacter youngae ATCC 29220] Length = 210 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 30/201 (14%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-T 133 S L TH H DH+ G+ LR I VY PD + DD Sbjct: 26 SFQQFLLTHYHMDHVQGLFPLR---WGVGAAIPVYGPPDE------------QGCDDLFK 70 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA 189 +P I++ + P + G ++ P+ H +++ G+ F VA+ +D Sbjct: 71 HPGILD---FSHTVAPFVVFDLQG-LQVTPLPLNHSKLT-FGYLFETAHSRVAWLSDTAG 125 Query: 190 FPAESLEKLQN--LDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 P ++L+ L N +IID A + +H ++ + E+I ILTH+ Sbjct: 126 LPDKTLKFLHNNQPQVIIIDCSHAPRAEPPRNHCDVNTVIALNEVIRCPRVILTHISHQF 185 Query: 245 DYDMVLKSTPSRVVPAFDGMQ 265 D ++ PS +DGM+ Sbjct: 186 DQWLMENPLPSGFEAGYDGME 206 >gi|271963803|ref|YP_003337999.1| hydrolase (metallo-beta-lactamase superfamily)-like protein [Streptosporangium roseum DSM 43021] gi|270506978|gb|ACZ85256.1| hydrolase (metallo-beta-lactamase superfamily)- like protein [Streptosporangium roseum DSM 43021] Length = 798 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 51 GSNTTVIVDTGPDFYM--QVLREQ-VLSIDAVLYTHPHADHIHGIDGL 95 G V+VD GPD + + LR + + V+ THPH DH+ G++G+ Sbjct: 558 GPGRAVVVDAGPDPVLMDRCLRSMGIREVPLVILTHPHFDHVGGLEGI 605 >gi|188996687|ref|YP_001930938.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931754|gb|ACD66384.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 254 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 52/243 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +++D GP +++ + ++A++ +H H DH+ I + V Sbjct: 32 AGKNILIDPGPGSLIRIFERGLEPKDLNAIVLSHRHLDHVADIASV------------VE 79 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV---PICMKSAGGVIE------ 160 +A D K+ + A+D +P+V++ I + G +IE Sbjct: 80 SATDSNKNKLDLLLAPIDAVDGD------DPVVLKYTKKGFKKIEITELGKIIEYENIKI 133 Query: 161 --AIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKL-QNLDFLIIDA--LKNGLH 214 +I + Q SL F + N + F + L +N D ++ + +K+ L+ Sbjct: 134 KPSIKHIHQGADTYSLQFEYNNKVFIYVACGRFYEDMLYAYPENPDVMVFNTTFVKSNLN 193 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS------------RVVPAFD 262 H S + + I+ + PK ILTH + + LK TPS +V+ A+D Sbjct: 194 YYHLSAEDVERIIKKVKPKLTILTHFSIQM-----LKHTPSKVAKEMSDRTGLKVIAAYD 248 Query: 263 GMQ 265 G++ Sbjct: 249 GLK 251 >gi|28211114|ref|NP_782058.1| hypothetical protein CTC01437 [Clostridium tetani E88] gi|28203554|gb|AAO35995.1| conserved protein [Clostridium tetani E88] Length = 542 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 18/172 (10%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ THPH D+I G++ + F +D P+ + H ++F+ ++ Sbjct: 177 QGVTKLDYVIGTHPHEDYIGGLEKVIDTF-----QVDKVFMPE-INHTTQTFKNVVTSIK 230 Query: 131 DR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ + P + N + N I V + L + ++ L +FGN ++ Sbjct: 231 NKGLKISTPKVGNSYGLGNARWQILAP----VSASYDNLNNYSIVTKL--KFGNNSFTFT 284 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +A E LQ + D + G H S S +++ ++ INPK A+++ Sbjct: 285 GDAESLSEGEILQKQLDISSDVINIGHHGSRTSTTQNF--LDKINPKYAVIS 334 >gi|120555084|ref|YP_959435.1| ribonuclease Z [Marinobacter aquaeolei VT8] gi|166991482|sp|A1U2M9|RNZ_MARAV RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|120324933|gb|ABM19248.1| RNAse Z [Marinobacter aquaeolei VT8] Length = 323 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 51 GSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 G +VD G Q++R + V+ + A+ TH H DHI G+ GL L + P+ Sbjct: 28 GPKPWYLVDCGEGTQHQLMRTRYSVMQLRAMFITHIHGDHIFGLPGLLTSASMLGRTEPL 87 Query: 107 DVYAAPDCMK 116 D+ A P + Sbjct: 88 DIIAPPQVRR 97 >gi|296166734|ref|ZP_06849158.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897904|gb|EFG77486.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 264 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGL 95 RGS+ V+VD GPD + R L + VL +H H DH GID L Sbjct: 47 RGSDELVVVDPGPDDAEHIARVAGLGRVTLVLISHRHGDHTDGIDKL 93 >gi|254993172|ref|ZP_05275362.1| hypothetical protein LmonocytoFSL_09148 [Listeria monocytogenes FSL J2-064] Length = 287 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|218530114|ref|YP_002420930.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium chloromethanicum CM4] gi|254782807|sp|B7KXC8|PQQB_METC4 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|218522417|gb|ACK83002.1| coenzyme PQQ biosynthesis protein B [Methylobacterium chloromethanicum CM4] Length = 299 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTG 61 H ILG A GVP+ C + RT+SS+ +S ER ++++ Sbjct: 2 HVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGER----WLLLNAS 57 Query: 62 PDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA P Sbjct: 58 PDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFSLYATP 112 Query: 113 DCMKHL 118 + + Sbjct: 113 GILASV 118 >gi|23099371|ref|NP_692837.1| hypothetical protein OB1916 [Oceanobacillus iheyensis HTE831] gi|22777600|dbj|BAC13872.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 207 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%) Query: 47 VSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++G+N +IVD G D + +++E L I+A+L TH H DHI ++ +R K Sbjct: 17 ILKKGTNG-IIVDPGGDAELILSIIKEHHLDINAILLTHAHFDHIGALEKIR---QKTNA 72 Query: 105 PIDVYAA 111 P+ ++ A Sbjct: 73 PVYLHQA 79 >gi|302385014|ref|YP_003820836.1| hypothetical protein Closa_0585 [Clostridium saccharolyticum WM1] gi|302195642|gb|ADL03213.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 281 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 54/290 (18%) Query: 10 LGCGASLGVPRITGDWGACD---PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G GA+ G P + AC+ N +TRS I + V++D PD Y+ Sbjct: 6 IGTGAAEGFPGMFCQCEACERARKAGGHNLKTRSCAII--------DDQVLIDLSPDLYV 57 Query: 67 Q--VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q +L ++ + ++ TH H DH L +FL + P M+ E++ Sbjct: 58 QSLLLGLELGKVKDLVVTHTHKDH------LDSFFLGLRARDGATKLPKIMEE--ENYLS 109 Query: 125 CF----------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR---- 170 + +AL++ +Y N I V + G ++ P+ H + Sbjct: 110 VYGSSFVETAVHRALEEESYS---NDSRIRFIPVETGIWFQAGRLKFCPLKANHKKDELC 166 Query: 171 -ISSLGFRFGNVAYCTDVNAFPAESLEKLQNL----DFLIIDALKNGL-HSSHFSLSES- 223 I ++ G++ Y D A E+L+ + +L D + +D + L H + E+ Sbjct: 167 HIYAVTDGSGSLLYANDTGALSEETLDMVGSLGLVFDVVSMDCARGTLPGDGHMGIKENL 226 Query: 224 -----LKKIELINPKNAI----LTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 L+++ P L+HM + D+ A+DGM Sbjct: 227 DLKKCLEQMGCTGPNTRYYLNHLSHMSGVIHDDLQRMMRAEGFTVAYDGM 276 >gi|110803763|ref|YP_698799.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110684264|gb|ABG87634.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 292 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 22/192 (11%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D + + +ID + THPH DHI G+D + F + + Sbjct: 62 MLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DVKSFY 116 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 AP H +++ KA+ + + E + + + V P+ Q+ Sbjct: 117 APKVA-HTTKTYENMLKAVKNEGLKI---QQIKEGTKIDLGKDTEVQVYS--PVKSQYEE 170 Query: 171 ISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 +++ + +G ++ +A E L L D LK G H SH S SE Sbjct: 171 LNNYSPVMKISYGQNSFMFTGDAESLVEKEILNENKDLKADVLKLGHHGSHSSTSEEF-- 228 Query: 227 IELINPKNAILT 238 ++ +NP A+++ Sbjct: 229 LKAVNPSIAVVS 240 >gi|257869430|ref|ZP_05649083.1| ribonuclease Z [Enterococcus gallinarum EG2] gi|257803594|gb|EEV32416.1| ribonuclease Z [Enterococcus gallinarum EG2] Length = 318 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S + + ER N + D G MQ+L + I+ + TH H DHI+ Sbjct: 13 PAKHRNVTSTALRLLDER--NAVWLFDCGEGTQMQILHSTIRPRKIEKIFITHLHGDHIY 70 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 71 GLPGLISSRSFQGGASPLEIYG 92 >gi|325570355|ref|ZP_08146170.1| ribonuclease Z [Enterococcus casseliflavus ATCC 12755] gi|325156683|gb|EGC68859.1| ribonuclease Z [Enterococcus casseliflavus ATCC 12755] Length = 324 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIH 90 P R +S + + ER N + D G MQ+L + I+ + TH H DHI+ Sbjct: 19 PAKHRNVTSTALRLLDER--NAVWLFDCGEGTQMQILHSTIRPRKIEKIFITHLHGDHIY 76 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL F P+++Y Sbjct: 77 GLPGLISSRSFQGGDTPLEIYG 98 >gi|291444507|ref|ZP_06583897.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|291347454|gb|EFE74358.1| integral membrane protein [Streptomyces roseosporus NRRL 15998] Length = 840 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ G LRG Sbjct: 604 GEGTGVVVDAGPDPGAVDRCLRDLAVTRVPLVVLTHFHADHVRGLPGVLRG 654 >gi|240948091|ref|ZP_04752501.1| glyoxalase II family protein [Actinobacillus minor NM305] gi|240297571|gb|EER48063.1| glyoxalase II family protein [Actinobacillus minor NM305] Length = 209 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + I+D G D +Q + +Q L ++ +L TH H DHI ++ +R +F Q VY Sbjct: 23 NKNAAIIDAGDNADRIIQFVEQQELHVEKLLITHAHLDHIMAVETVRDHFGAQ-----VY 77 Query: 110 AAPDCMKHLFESF-RYCFK 127 + K LFE + C K Sbjct: 78 GSHLADKPLFEQLPQMCEK 96 >gi|148653605|ref|YP_001280698.1| ribonuclease Z [Psychrobacter sp. PRwf-1] gi|148572689|gb|ABQ94748.1| RNAse Z [Psychrobacter sp. PRwf-1] Length = 354 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 35/181 (19%) Query: 33 PKNRRTRSSLKISRVSERGSNTT---------VIVDTGPDFYMQVLREQ--VLSIDAVLY 81 P +R ++L I ++ +N+ V++D G Q+L + V + A+ Sbjct: 14 PTKKRNVTALAIECLNPYAANSAQQSGSKKPWVLIDCGEATQHQLLHTKLSVRHLAAICI 73 Query: 82 THPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYC----------FKAL 129 TH H DH +G+ GL R P+ + AP + L ++ + F A+ Sbjct: 74 THVHGDHCYGLPGLLASMAMSGRTAPLTLI-APKAILTLIQAVQSTTDLYLPYDIDFVAI 132 Query: 130 DDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 +D+ I NP++++ SA +E I I++ R++S GF V + Sbjct: 133 EDKVCADQSIANPVILQ--------LSAAHKLE-IKIVKLSHRVASYGFVITQVVQSLKL 183 Query: 188 N 188 N Sbjct: 184 N 184 >gi|15672377|ref|NP_266551.1| hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|12723268|gb|AAK04493.1|AE006276_8 hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|326405971|gb|ADZ63042.1| beta-lactamase superfamily Zn-dependent hydrolase [Lactococcus lactis subsp. lactis CV56] Length = 270 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 27/81 (33%) Query: 60 TGPDFYMQVLREQVL----------------------SIDAVLYTHPHADHIHGIDGLRG 97 TG FY++ ++++L IDA+L TH H+DHI GI Sbjct: 17 TGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIG---- 72 Query: 98 YFLKQKRPIDVYAAPDCMKHL 118 L +K ID+YA D L Sbjct: 73 -VLARKYGIDLYANEDTWSEL 92 >gi|297194429|ref|ZP_06911827.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152268|gb|EDY62670.2| integral membrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 854 Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G V+VD GPD + L E V + VL TH HADH+ G++G LRG Sbjct: 619 GDGAAVVVDAGPDPGVTDRCLSELGVTEVPLVLVTHFHADHVAGLEGVLRG 669 >gi|292670231|ref|ZP_06603657.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292648183|gb|EFF66155.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 303 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 5/42 (11%) Query: 56 VIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGI 92 V++DTG + LR + V IDAV+ THPHADHI G+ Sbjct: 62 VLIDTGDLDEREKLRAELSKAAVKKIDAVILTHPHADHIGGM 103 >gi|239941067|ref|ZP_04693004.1| putative integral membrane protein [Streptomyces roseosporus NRRL 15998] gi|239987547|ref|ZP_04708211.1| putative integral membrane protein [Streptomyces roseosporus NRRL 11379] Length = 747 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ G LRG Sbjct: 511 GEGTGVVVDAGPDPGAVDRCLRDLAVTRVPLVVLTHFHADHVRGLPGVLRG 561 >gi|149179289|ref|ZP_01857851.1| hypothetical protein PM8797T_00472 [Planctomyces maris DSM 8797] gi|148841863|gb|EDL56264.1| hypothetical protein PM8797T_00472 [Planctomyces maris DSM 8797] Length = 244 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 45/189 (23%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHI 89 +P RR + L + + +I D G F+ Q L+ + L I TH H DHI Sbjct: 12 HPNERRHTACLMLPELG-------LIFDAGTSFFRVQQFLQTRDLQI---FLTHAHLDHI 61 Query: 90 HGIDGLRGYFL-----KQKRPIDVYAAPDCMK----HLFESFRYCFKALDDRTYPPIVNP 140 G+ +FL Q + +Y + HLF F L D + P+ Sbjct: 62 VGL----SFFLVPMLTDQVDSVKLYGEASKLAAIQTHLFS--EEIFPLLPDYEFTPLPET 115 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLE 196 + + G+++ IP+ G S+G+R ++AY TD A P + LE Sbjct: 116 VSVREQ----------GILQHIPMEHPGG---SVGYRIDWPGHSLAYITD-TANPRQHLE 161 Query: 197 KLQNLDFLI 205 ++ +D LI Sbjct: 162 FVKGVDLLI 170 >gi|21227778|ref|NP_633700.1| hypothetical protein MM_1676 [Methanosarcina mazei Go1] gi|20906183|gb|AAM31372.1| conserved protein [Methanosarcina mazei Go1] Length = 602 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 G D V +E + S+D V+ THPH DHI G+D + F Sbjct: 90 GDDVANYVKKEGITSLDYVVATHPHEDHIGGMDEILNDF 128 >gi|296333463|ref|ZP_06875916.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675031|ref|YP_003866703.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii str. W23] gi|296149661|gb|EFG90557.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413275|gb|ADM38394.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii str. W23] Length = 307 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 17/149 (11%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R +S+ + + ER S + D G Q+L + I+ + TH H DH++ Sbjct: 13 PAKTRNVTSVALKLLEERRS--VWLFDCGEATQHQILHTTIKPRKIEKIFITHMHGDHVY 70 Query: 91 GIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL G F + + VY P +K E+ K + P+VI+ + Sbjct: 71 GLPGLLGSRSFQGGEDELTVY-GPKGIKLFIETSLAVTKT-------HLTYPLVIKEIEE 122 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFR 177 I + ++ A+ ++ HG + + G+R Sbjct: 123 GIVFEDDQFIVTAVSVI--HG-VEAFGYR 148 >gi|255521495|ref|ZP_05388732.1| putative lipoprotein [Listeria monocytogenes FSL J1-175] Length = 143 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + ID +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNAD 103 >gi|156741148|ref|YP_001431277.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232476|gb|ABU57259.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 257 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 10/97 (10%) Query: 56 VIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLK---QKRPIDVYA 110 V++D G Y ++LR V D A++ TH HADH++G+ GL + LK R + +Y Sbjct: 31 VLIDAGGSTYQRLLRAGVNPRDLRAMILTHSHADHLNGLPGLL-FSLKLAGYDRRLPIYG 89 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 + + + +A + TY P + I +E D Sbjct: 90 NAPTLT----AAQRILEAFNLETYQPDIEWIPVEAGD 122 >gi|254172164|ref|ZP_04878840.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] gi|214034060|gb|EEB74886.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] Length = 270 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 10/71 (14%) Query: 47 VSERGSNTTVIVDTGPD--FYMQVLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLK 101 V RG V+VDTG D + + E S IDA+ TH H DH GLR + Sbjct: 27 VEHRGKK--VLVDTGTDGKVLLGNMTELGFSPDEIDAIFLTHGHYDH---TGGLRAFLES 81 Query: 102 QKRPIDVYAAP 112 + IDVYA P Sbjct: 82 RNSGIDVYAHP 92 >gi|238760222|ref|ZP_04621367.1| Beta-lactamase domain protein [Yersinia aldovae ATCC 35236] gi|238701545|gb|EEP94117.1| Beta-lactamase domain protein [Yersinia aldovae ATCC 35236] Length = 241 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 92/254 (36%), Gaps = 48/254 (18%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 P RR S + R T ++D G Q+ I L TH H DH+ G Sbjct: 17 QPALRRQPCSAML-----RYQGETTLIDAGLPALDQLFAGG--EIQRFLLTHYHMDHVQG 69 Query: 92 IDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENND 147 + LR G + P D D KH +F+ A +PI Sbjct: 70 LFPLRWGCGNAIPVYGPPDPDGCDDLYKHPGILAFQPPLSAF---------HPIQF---- 116 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNL 201 G + P+ H +I+ G+ + +AY TD PA+S L +N+ Sbjct: 117 ---------GDLRVTPVPLNHSKIT-FGYLLQSPNRTIAYLTDTIGLPADSALFLASKNI 166 Query: 202 DFLIIDALKNGLH--------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 D LI D H +H ++ +L EL+ P +LTH+ LD + + Sbjct: 167 DLLIQDCSHPPHHLAPHRSPPRNHNDVTMALAISELLKPAATLLTHISHQLDTWALDNTL 226 Query: 254 PSRVVPAFDGMQFS 267 P V A D S Sbjct: 227 PDGVTIAQDNQVIS 240 >gi|242398691|ref|YP_002994115.1| Hydrolase, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] gi|242265084|gb|ACS89766.1| Hydrolase, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] Length = 273 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 12/75 (16%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYFLK 101 V +G N ++VD G D + + + L+I D + TH H DH G++ FLK Sbjct: 27 VEHKGKN--ILVDAGSDGKVLLHNIKALNISPEEVDVIFLTHGHYDHTGGLE----EFLK 80 Query: 102 -QKRPIDVYAAPDCM 115 +K ID+YA PD Sbjct: 81 ARKSSIDIYAHPDVF 95 >gi|194364620|ref|YP_002027230.1| hydroxyacylglutathione hydrolase [Stenotrophomonas maltophilia R551-3] gi|226724032|sp|B4SLN7|GLO2_STRM5 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|194347424|gb|ACF50547.1| hydroxyacylglutathione hydrolase [Stenotrophomonas maltophilia R551-3] Length = 254 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 26/47 (55%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G + L +Q L +D++L TH H DHI G+ L+ F Sbjct: 22 GAAVVVDPGDAAPVLALADQGLRVDSILLTHHHDDHIGGVPALQARF 68 >gi|221133418|ref|ZP_03559723.1| pyrroloquinoline quinone biosynthesis protein PqqB [Glaciecola sp. HTCC2999] Length = 306 Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 27/135 (20%) Query: 6 HFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + ILG GA GVP+ C + T P RT+SS+ +S S R V+++ Sbjct: 2 YILILGSGAGGGVPQWNCHCDNCAGCRNKTLPVRERTQSSIAVS--SNR--KDWVLINAS 57 Query: 62 PDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + +L +I +++ T DH G+ L++ P+ VY Sbjct: 58 PDIRQQINQSPLLWPADGQQRGTAIKSIILTDSQIDHTTGL-----LTLREGLPLPVY-- 110 Query: 112 PDCMKHLFESFRYCF 126 C ++E F Sbjct: 111 --CTDVVYEDLSTAF 123 >gi|20129357|ref|NP_609183.1| CG12375 [Drosophila melanogaster] gi|74869792|sp|Q9VLS9|LACB2_DROME RecName: Full=Beta-lactamase-like protein 2 homolog gi|7297345|gb|AAF52605.1| CG12375 [Drosophila melanogaster] gi|220944196|gb|ACL84641.1| CG12375-PA [synthetic construct] gi|220954142|gb|ACL89614.1| CG12375-PA [synthetic construct] Length = 292 Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 20/88 (22%) Query: 36 RRTRSSLKI-----SRVSERGSNT--------TVIVDTGPDFYMQ-------VLREQVLS 75 R T S ++I S ++ +G+NT +++DTG + Q VL+++ S Sbjct: 9 RLTSSVIRILGCNPSAMTLQGTNTYLLGSGSRRILIDTGDEDVPQYIAHLGDVLQQEKAS 68 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ID +L TH H DH+ G+ + G L +K Sbjct: 69 IDTILLTHWHHDHVGGVKSIVGTKLAEK 96 >gi|307330506|ref|ZP_07609648.1| ComEC/Rec2-related protein [Streptomyces violaceusniger Tu 4113] gi|306883841|gb|EFN14885.1| ComEC/Rec2-related protein [Streptomyces violaceusniger Tu 4113] Length = 742 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G T V+VDTGP+ + LR V+ I ++ TH HADH+ G+ G LRG Sbjct: 506 GPGTAVVVDTGPEPRAVDRCLRSLGVVRIPLMVLTHFHADHVAGLTGALRG 556 >gi|156551824|ref|XP_001604122.1| PREDICTED: similar to zinc phosphodiesterase [Nasonia vitripennis] Length = 878 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 67/304 (22%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +K+Y +LG G+S+ P R S + + +V+E +T++I+D Sbjct: 561 VKEYPRLVMLGTGSSI----------------PNKVRNTSGI-LFQVNE---DTSIILDC 600 Query: 61 GPDFYMQVLR-------EQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----V 108 G Q++R ++VL SI AV +H HADH G+ G+ LKQ++ + Sbjct: 601 GEATMGQIIRFFGVSEADRVLKSIKAVYVSHLHADHHLGLVGI----LKQRKRLTDEPVF 656 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 AP + + F+ + D Y I N ++ N + + ++ + +++ I Sbjct: 657 LLAPQQISWYLNYYHSRFEPIQD-LYRLISNRDLLLNQTI-LSSATSKALYDSLGI---- 710 Query: 169 GRISSLGFRFGNVAY------------CTDVNAFPAESLEKLQNLDFLIID--ALKNGLH 214 IS++ AY C + P E++ KL FL+I +++GL Sbjct: 711 ANISTINVTHCPFAYGIAITLNDGRKTCYSGDTVPCENMVKLAKDSFLLIHEATMEDGLE 770 Query: 215 SS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP------SRVVPAFDG 263 H ++S+++ N +LTH L S +RV AFD Sbjct: 771 QEAVLKRHSTISQAVSIGVKANVNFTLLTHFSQRYSKIPRLPSVEQSGIDFARVGIAFDF 830 Query: 264 MQFS 267 M+ S Sbjct: 831 MKIS 834 >gi|330685978|gb|EGG97601.1| ribonuclease Z [Staphylococcus epidermidis VCU121] Length = 306 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 18/167 (10%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 + R++ I+ E SN+ + D G Q+L + ID + TH H DHI G+ G Sbjct: 15 KERNTQAIALNLEPYSNSIWLFDVGEGTQHQILHHSIKLGKIDHIFITHMHGDHIFGLPG 74 Query: 95 L---RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L R + + +P+ + K++ + L+ PI D + Sbjct: 75 LLTSRSFQGGENKPLTLVGPKGIQKYIETTLTLSESHLN--------YPITYIEIDESLN 126 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFG--NVAYCTDVNAFPAESLE 196 G +++A + HG I S G+R DV+A A LE Sbjct: 127 YHHNGFIVQA--EMLNHG-IKSFGYRIETPTTPGTIDVDALKAIGLE 170 >gi|225856892|ref|YP_002738403.1| VicX protein [Streptococcus pneumoniae P1031] gi|225725120|gb|ACO20972.1| VicX protein [Streptococcus pneumoniae P1031] Length = 269 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|220932858|ref|YP_002509766.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219994168|gb|ACL70771.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 263 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 26/138 (18%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +IDA+L TH H DHI G+ L ++ I V+A + +++ C + Sbjct: 50 NIDAILVTHEHKDHIKGVG-----ILSRRYDIPVFAN----ELTWKAAEPCLGEIKS--- 97 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAF 190 N I + D I G + IP H +GF F + TD+ Sbjct: 98 ----NNCKIFDGDFSI------GNLGVIPFSSSHDAEDPVGFVFKCRNLKLGLATDMGIM 147 Query: 191 PAESLEKLQNLDFLIIDA 208 P E+ L+ D LII+A Sbjct: 148 PDEAKAYLKGSDLLIIEA 165 >gi|330830220|ref|YP_004393172.1| Arylsulfatase [Aeromonas veronii B565] gi|328805356|gb|AEB50555.1| Arylsulfatase [Aeromonas veronii B565] Length = 319 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 33/232 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL--RGYFL 100 S V + +++D G Y++ + ++ +D + TH H DH+ + L YF Sbjct: 55 SEVIWWKGKSRILIDAGGGVYLRFGQAGAKLEEVDFIGITHFHTDHVTDLPALLKGAYFF 114 Query: 101 KQKRPIDVYAAPDC------MKHLFE----------SFRYCFKALDDRTYPPIVNPIVIE 144 ++ P+D+ A P+ M F+ ++ FK D +P ++ + + Sbjct: 115 ERSDPLDL-AGPEAGSAFPSMSGYFDALFNKDKGAYAYLSGFKDGTDGLFPITLHDVPYQ 173 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN 200 N + G I A+ I HG + L +R G + D N + + Sbjct: 174 NPQPHTVYQQDGLTITALGI--PHGDVPCLAYRIESAEGTIVISADQNGSNPAFVPFAKG 231 Query: 201 LDFLIID-ALKNGLHSSHFSL----SESLKKIELINPKNAILTH-MHVDLDY 246 D L++ A+ G S SL S K +NPK +L H M V L++ Sbjct: 232 ADILVMPLAIHEGADSVSASLHAKPSVVAKIAAEVNPKLLVLNHWMGVGLNH 283 >gi|119488239|ref|XP_001262659.1| metallo-beta-lactamase domain protein, putative [Neosartorya fischeri NRRL 181] gi|119410817|gb|EAW20762.1| metallo-beta-lactamase domain protein, putative [Neosartorya fischeri NRRL 181] Length = 298 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 21/171 (12%) Query: 22 TGDWG--ACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV 79 TG W DPT T +++ I V + T I D + ++RE+ +D + Sbjct: 16 TGTWQYVVADPT------TSTAVIIDPVLDYDPATQGITTESADALLSLVREKGYKVDRI 69 Query: 80 LYTHPHADHIHGIDGLRGYFLKQ---KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 L TH HADH+ L+ ++ + PI + ++ LF RY A + Y Sbjct: 70 LETHAHADHLTAASYLQKRLAEEQGHRPPIGIGKRIGQVQKLFGQ-RYGIPA---QEYED 125 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + ++ I G + A I LG+R G+ +C D+ Sbjct: 126 VFDKLFEDDETFKI------GNLTAQAIHLPGHTPDHLGYRIGDNIFCGDL 170 >gi|94984388|ref|YP_603752.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94554669|gb|ABF44583.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 305 Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 9/73 (12%) Query: 45 SRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S V E G +++DTG D ++ L L+ A+L TH HADH HG + + Sbjct: 24 SVVVEDGRGGALLIDTGLDDSHARKLLRALEAAKLTPTAILNTHSHADH-HGGN---AFL 79 Query: 100 LKQKRPIDVYAAP 112 LK+ ++VYA P Sbjct: 80 LKRFPELEVYAPP 92 >gi|150019869|ref|YP_001312123.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906334|gb|ABR37167.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%) Query: 56 VIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D +Q + E ++ + TH H+DHI G+ L +K I +YA Sbjct: 24 ILIDAGLPGKKIDLALQEINENPKDLNGIFITHEHSDHIKGVG-----VLSRKYDIPIYA 78 Query: 111 APD---CMKHLFESFR-YCFKALDDRTYPPI 137 D M+ L + + + K +D R++ I Sbjct: 79 NADTWSAMESLIGNIKEHNIKVIDKRSFTEI 109 >gi|182417034|ref|ZP_02948413.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237669633|ref|ZP_04529611.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379131|gb|EDT76634.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237654867|gb|EEP52429.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 263 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 14/91 (15%) Query: 56 VIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D ++ + E+ +ID + TH H+DHI G+ + +K I +YA Sbjct: 24 ILIDAGLPGKKIDEALKAIDEETKNIDGIFITHEHSDHIKGVG-----VISRKYDIPIYA 78 Query: 111 APDCMKHLFESF----RYCFKALDDRTYPPI 137 D + S + K +D R+ I Sbjct: 79 NADTWSAMEGSLGKIKEHNIKVIDKRSVTEI 109 >gi|331005193|ref|ZP_08328588.1| hypothetical protein IMCC1989_1223 [gamma proteobacterium IMCC1989] gi|330420998|gb|EGG95269.1| hypothetical protein IMCC1989_1223 [gamma proteobacterium IMCC1989] Length = 234 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 11/60 (18%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +T++++ I V ER S Y+Q+L E LS+ + TH HADHI G+ LR Sbjct: 22 QTKTAMIIDPVKERLS-----------LYLQLLEEFELSLHYAIDTHLHADHITGMGALR 70 >gi|325955204|ref|YP_004238864.1| ribonuclease Z [Weeksella virosa DSM 16922] gi|323437822|gb|ADX68286.1| Ribonuclease Z [Weeksella virosa DSM 16922] Length = 310 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 19/176 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY 98 S ++ +SER ++D G +Q+ R ++ I+ V TH H DH+ G+ GL Sbjct: 22 SAQVLNISER----YFLIDCGEGTQVQLRRARLKFSKINHVFITHMHGDHVFGLIGLLSS 77 Query: 99 F--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 F L +++PI V+ + + R +P + N +E N+ + + Sbjct: 78 FQLLGREKPITVHGPKGIEEFITIQMRLSGSY---HGFPILFNE--LEGNESKVIFEDDK 132 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 +++ IP+ RI + G+ F + +N ++++ D+ LKNG Sbjct: 133 VLVKTIPL---DHRIYTNGYLFQEKSKPRRLNPDAISEFDEIEVCDY---QNLKNG 182 >gi|225850541|ref|YP_002730775.1| metal dependent phosphohydrolase [Persephonella marina EX-H1] gi|225644986|gb|ACO03172.1| metal dependent phosphohydrolase [Persephonella marina EX-H1] Length = 254 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRPIDVYAA 111 N TV +D G ++ L+E + I + TH H DHI I L + K+++P+ +YA Sbjct: 29 NDTVCIDAGN--IIEPLKEDIFKISHIFLTHSHFDHISDIPFLLDLTYSKREKPLYLYAL 86 Query: 112 PDCMKHLFE 120 D + L E Sbjct: 87 KDTINTLKE 95 >gi|86751719|ref|YP_488215.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gi|86574747|gb|ABD09304.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 244 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 69/182 (37%), Gaps = 21/182 (11%) Query: 75 SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 ++D VL TH H DH G+ L K+KRP+ + P L F+ Sbjct: 52 ALDLVLITHFHGDHFGGLPFLLLDAKSAKRKRPLVIAGPPGIDIRLTRVMEALFEH-SSA 110 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---------RISSLGFRFGNVAY 183 T P ++ + VP G + A P HG RI + G +AY Sbjct: 111 TQPTFDLQVIALDPTVPRTF----GAVTATPFPVIHGDSGGPFYAYRIEAEG---RTLAY 163 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKKIELINPKNAILTHMHV 242 D + + + D I +A + +H SL + INPK ILTHM Sbjct: 164 SGDTQ-WTDTLVAAAHDADLFIAEAYTYDRNVKNHLSLKALETHLPEINPKRLILTHMGD 222 Query: 243 DL 244 D+ Sbjct: 223 DV 224 >gi|163851246|ref|YP_001639289.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium extorquens PA1] gi|254560945|ref|YP_003068040.1| pyrroloquinoline quinone (PQQ) biosynthesis protein B [Methylobacterium extorquens DM4] gi|226704954|sp|A9W3R2|PQQB_METEP RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|163662851|gb|ABY30218.1| coenzyme PQQ biosynthesis protein B [Methylobacterium extorquens PA1] gi|254268223|emb|CAX24158.1| Pyrroloquinoline quinone (PQQ) biosynthesis protein B [Methylobacterium extorquens DM4] Length = 299 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTG 61 H ILG A GVP+ C + RT+SS+ +S ER ++++ Sbjct: 2 HVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGER----WLLLNAS 57 Query: 62 PDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA P Sbjct: 58 PDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYATP 112 Query: 113 DCMKHL 118 + + Sbjct: 113 GILASV 118 >gi|168213627|ref|ZP_02639252.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170714967|gb|EDT27149.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 284 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/167 (22%), Positives = 83/167 (49%), Gaps = 15/167 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ THPHADHI G++ + +K ++ + AP ++ + F+ AL ++ Sbjct: 81 LDFIIATHPHADHIGGMESII-----KKFHVNHFFAPKVTENT-DVFKGMVTALKEKDIN 134 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS----LGFRFGNVAYCTDVNAFP 191 +N + ++ +PI + + P +++ I++ L +G ++ +A Sbjct: 135 --INTLS-KSKSLPIDLGENTKIEIYSPSNKEYENINNYSPILKIYYGETSFLFTGDAET 191 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +E +++ + L D LK G H S S ++S ++ ++PK A+++ Sbjct: 192 EAEMEAVKSNENLKSDVLKVGHHGSTTSSTDSF--LKEVSPKIAVIS 236 >gi|15901087|ref|NP_345691.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15903148|ref|NP_358698.1| metal-dependent hydrolase [Streptococcus pneumoniae R6] gi|111657845|ref|ZP_01408560.1| hypothetical protein SpneT_02000968 [Streptococcus pneumoniae TIGR4] gi|116516804|ref|YP_816554.1| vicX protein [Streptococcus pneumoniae D39] gi|148985120|ref|ZP_01818359.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|148989247|ref|ZP_01820627.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|148993835|ref|ZP_01823237.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|149002592|ref|ZP_01827524.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|149007117|ref|ZP_01830786.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|149012276|ref|ZP_01833345.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|149019217|ref|ZP_01834579.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168484879|ref|ZP_02709824.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|168486547|ref|ZP_02711055.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|168489053|ref|ZP_02713252.1| VicX protein [Streptococcus pneumoniae SP195] gi|168493147|ref|ZP_02717290.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|168577196|ref|ZP_02723005.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|169832897|ref|YP_001694656.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|182684047|ref|YP_001835794.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|194397665|ref|YP_002037826.1| VicX protein [Streptococcus pneumoniae G54] gi|221231920|ref|YP_002511072.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225854691|ref|YP_002736203.1| VicX protein [Streptococcus pneumoniae JJA] gi|225859006|ref|YP_002740516.1| VicX protein [Streptococcus pneumoniae 70585] gi|225860941|ref|YP_002742450.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649927|ref|ZP_04524179.1| VicX protein [Streptococcus pneumoniae CCRI 1974] gi|237822524|ref|ZP_04598369.1| VicX protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230884|ref|ZP_06964565.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254365|ref|ZP_06977951.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502779|ref|YP_003724719.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|303254278|ref|ZP_07340387.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|303258860|ref|ZP_07344839.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|303261544|ref|ZP_07347491.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|303264214|ref|ZP_07350134.1| vicX protein [Streptococcus pneumoniae BS397] gi|303266155|ref|ZP_07352048.1| vicX protein [Streptococcus pneumoniae BS457] gi|303268118|ref|ZP_07353918.1| vicX protein [Streptococcus pneumoniae BS458] gi|307067874|ref|YP_003876840.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|307127187|ref|YP_003879218.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|14193096|gb|AAK55819.1|AF219111_3 MicC [Streptococcus pneumoniae] gi|6689278|emb|CAB65440.1| VicX protein [Streptococcus pneumoniae] gi|14972706|gb|AAK75331.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15458730|gb|AAK99908.1| VicX protein [Streptococcus pneumoniae R6] gi|116077380|gb|ABJ55100.1| vicX protein [Streptococcus pneumoniae D39] gi|147759203|gb|EDK66196.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|147761421|gb|EDK68387.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|147763602|gb|EDK70537.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|147922565|gb|EDK73683.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|147925225|gb|EDK76304.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|147927660|gb|EDK78685.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|147931087|gb|EDK82066.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168995399|gb|ACA36011.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|172041983|gb|EDT50029.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|182629381|gb|ACB90329.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|183570428|gb|EDT90956.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|183572535|gb|EDT93063.1| VicX protein [Streptococcus pneumoniae SP195] gi|183576568|gb|EDT97096.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|183577200|gb|EDT97728.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|194357332|gb|ACF55780.1| VicX protein [Streptococcus pneumoniae G54] gi|220674380|emb|CAR68930.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225720567|gb|ACO16421.1| VicX protein [Streptococcus pneumoniae 70585] gi|225723315|gb|ACO19168.1| VicX protein [Streptococcus pneumoniae JJA] gi|225726680|gb|ACO22531.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238374|gb|ADI69505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|301794308|emb|CBW36733.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|301800146|emb|CBW32751.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] gi|301801919|emb|CBW34643.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] gi|302598772|gb|EFL65809.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|302637124|gb|EFL67612.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|302639803|gb|EFL70259.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|302642335|gb|EFL72682.1| vicX protein [Streptococcus pneumoniae BS458] gi|302644325|gb|EFL74579.1| vicX protein [Streptococcus pneumoniae BS457] gi|302646026|gb|EFL76253.1| vicX protein [Streptococcus pneumoniae BS397] gi|306409411|gb|ADM84838.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|306484249|gb|ADM91118.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|327389461|gb|EGE87806.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA04375] gi|332073563|gb|EGI84042.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17570] gi|332074556|gb|EGI85030.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17545] gi|332074835|gb|EGI85307.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41301] Length = 269 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|320010876|gb|ADW05726.1| ComEC/Rec2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 731 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 G T V+VDTGP+ + + LR+ V + +L TH HADH+ G+ G+ Sbjct: 494 GDGTGVVVDTGPEPRLVDRCLRDLGVTRVPLLLLTHFHADHVRGLPGV 541 >gi|148998655|ref|ZP_01826094.1| vicX protein [Streptococcus pneumoniae SP11-BS70] gi|147755492|gb|EDK62540.1| vicX protein [Streptococcus pneumoniae SP11-BS70] Length = 269 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|296272958|ref|YP_003655589.1| metal dependent phosphohydrolase [Arcobacter nitrofigilis DSM 7299] gi|296097132|gb|ADG93082.1| metal dependent phosphohydrolase [Arcobacter nitrofigilis DSM 7299] Length = 804 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 16/114 (14%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAA 111 NT ++D G ++ L + ID + TH H DH++ I L F K+K+PI +Y Sbjct: 29 NTNSVIDAGN--IVKGLGTKAEYIDNIFLTHSHLDHLNDIPYLLDIFYEKRKKPITIYGT 86 Query: 112 PDCMKHL------------FESFRYCFKALDDRTYPPI-VNPIVIENNDVPICM 152 +++L F K L + PI ++ +I +D I + Sbjct: 87 SKTLENLRNYILNWEIWPDFSEIELLNKKLKAIVFKPIEIDETIILEDDTKITV 140 >gi|256847026|ref|ZP_05552472.1| ribonuclease Z [Lactobacillus coleohominis 101-4-CHN] gi|256715690|gb|EEU30665.1| ribonuclease Z [Lactobacillus coleohominis 101-4-CHN] Length = 313 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P +R SSL + + ER N + D G Q+L + I+ + TH H DHI Sbjct: 12 SPSKQRNVSSLALRLLEER--NAIWLFDVGEATQHQILNTTIRPRKIEKIFITHLHGDHI 69 Query: 90 HGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 G+ GL F P+ +Y P +K ++ Sbjct: 70 FGLPGLLSSRSFQGGNEPLTIY-GPVGIKEFVQT 102 >gi|168491146|ref|ZP_02715289.1| VicX protein [Streptococcus pneumoniae CDC0288-04] gi|183574335|gb|EDT94863.1| VicX protein [Streptococcus pneumoniae CDC0288-04] Length = 269 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|283795475|ref|ZP_06344628.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|291077140|gb|EFE14504.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|295091159|emb|CBK77266.1| Zn-dependent hydrolases, including glyoxylases [Clostridium cf. saccharolyticum K10] Length = 215 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 47 VSERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGID------GLRGY 98 VS + V++D G + + L+ L A+L TH H+DHI G++ G + Y Sbjct: 18 VSNEETREAVVIDPGDQGELIAEALKRDSLQTKAILLTHGHSDHIGGLEAVKKATGAKVY 77 Query: 99 FLKQKRPI 106 L Q+R + Sbjct: 78 ALDQEREL 85 >gi|255932097|ref|XP_002557605.1| Pc12g07700 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582224|emb|CAP80397.1| Pc12g07700 [Penicillium chrysogenum Wisconsin 54-1255] Length = 659 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I A++YTHPH DH G+ G +K+ I V A ++H + A+ R+ Sbjct: 172 IKAIIYTHPHVDHFGGVKGFVTDEDIEKKDIKVLAPQGFLEHAVSENVFAGTAMSRRS 229 >gi|29653665|ref|NP_819357.1| hydroxyacylglutathione hydrolase [Coxiella burnetii RSA 493] gi|29540927|gb|AAO89871.1| hydroxyacylglutathione hydrolase [Coxiella burnetii RSA 493] Length = 257 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 VI+D G + L++Q L++ A+L TH H DH +GI G+ QK P VY Sbjct: 24 KQAAVIIDPGEAKPVLDFLKQQKLNLAAILVTHHHWDHTNGIQGIL-----QKHPAPVYG 78 Query: 111 A 111 + Sbjct: 79 S 79 >gi|56708453|ref|YP_170349.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670924|ref|YP_667481.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis FSC198] gi|134301554|ref|YP_001121522.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis WY96-3418] gi|187931400|ref|YP_001891384.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. mediasiatica FSC147] gi|224457604|ref|ZP_03666077.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis MA00-2987] gi|254371077|ref|ZP_04987079.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis FSC033] gi|254875297|ref|ZP_05248007.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis MA00-2987] gi|81597217|sp|Q5NF43|GLO2_FRATT RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|122970875|sp|Q14GJ6|GLO2_FRAT1 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|160386312|sp|A4IWV0|GLO2_FRATW RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|226723998|sp|B2SFR3|GLO2_FRATM RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|56604945|emb|CAG46038.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis SCHU S4] gi|110321257|emb|CAL09421.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis FSC198] gi|134049331|gb|ABO46402.1| Metallo-beta-lactamase superfamily protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151569317|gb|EDN34971.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis FSC033] gi|187712309|gb|ACD30606.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. mediasiatica FSC147] gi|254841296|gb|EET19732.1| hydroxyacylglutathione hydrolase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159646|gb|ADA79037.1| Metallo-beta-lactamase superfamily protein [Francisella tularensis subsp. tularensis NE061598] Length = 252 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 S+ VI D + + + + L ++A+L TH H DHI G+ L +L K + Y Sbjct: 23 SHAIVIDPLKSDIFAEFIAKNKLQLEAILITHKHGDHIAGVKKLLAIYLNAK--VYAYTG 80 Query: 112 PDCMK 116 D K Sbjct: 81 NDLFK 85 >gi|257870082|ref|ZP_05649735.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804246|gb|EEV33068.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 268 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANTKTWQAMDNMVGNIAVEQKHVFE 108 >gi|20094710|ref|NP_614557.1| metallo-beta-lactamase superfamily hydrolase [Methanopyrus kandleri AV19] gi|19887886|gb|AAM02487.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Methanopyrus kandleri AV19] Length = 334 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTY 134 DAV+ THPH DH G+ R F + R +V AA M+ E R F+A LD RTY Sbjct: 37 DAVIVTHPHRDHYGGVP--RTEF-GELRADEVTAALLGMEDEAEPLRSSFEAGLLDVRTY 93 Query: 135 P 135 P Sbjct: 94 P 94 >gi|297170850|gb|ADI21869.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured verrucomicrobium HF0130_25O04] Length = 267 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 39/176 (22%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R S +T+++D G F ++ ++ +DAV TH H DH GI GL Y Sbjct: 22 RTSESTILIDAGLSCKKLHFLLKEEGIEIEELDAVFLTHEHNDHSAGIRGLSKYC----- 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA D ++ + P N + E P +S + P Sbjct: 77 NLPVYANQDTVQAV------------QAKLPRPPNWKIFETG-APFSFRS----FKVHPF 119 Query: 165 LQQHGRISSLGFRF------------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +GF F ++A+ TD+ P E+++ L+++A Sbjct: 120 SVPHDAYDPVGFYFEWGKEDDLFEKPSSLAWVTDLGYVPTLVRERIRQARILVVEA 175 >gi|258627201|ref|ZP_05721989.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580503|gb|EEW05464.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 660 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q L E+ + AV+Y+H HADH G+ G+ L + + V A + H Sbjct: 157 DFVNQELGER--PVKAVVYSHAHADHFGGVKGIVSQELVDRGEVQVIAPKGFLNHAVAEN 214 Query: 123 RYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIP 163 A+ RT N + D I A G + IP Sbjct: 215 VLAGNAMSRRTTYQYGNALPKGATGQVDAAIGKGVAQGEVSLIP 258 >gi|307706666|ref|ZP_07643472.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307709235|ref|ZP_07645694.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|322376759|ref|ZP_08051252.1| VicX protein [Streptococcus sp. M334] gi|307617910|gb|EFN97071.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307620181|gb|EFN99298.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|321282566|gb|EFX59573.1| VicX protein [Streptococcus sp. M334] Length = 269 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|238926245|ref|ZP_04658005.1| beta-lactamase domain protein [Selenomonas flueggei ATCC 43531] gi|238885925|gb|EEQ49563.1| beta-lactamase domain protein [Selenomonas flueggei ATCC 43531] Length = 313 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 5/45 (11%) Query: 56 VIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGL 95 V++DTG LR + V IDAV+ THPHADHI G++ L Sbjct: 72 VLIDTGDLDERDKLRAELDKAGVKKIDAVILTHPHADHIGGMEML 116 >gi|195348363|ref|XP_002040718.1| GM22320 [Drosophila sechellia] gi|194122228|gb|EDW44271.1| GM22320 [Drosophila sechellia] Length = 348 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V + V+ P+ ++ ++EQ L++ VL TH H DH G + L + K+ + Sbjct: 107 VDTKTREAAVVDPVEPELVIKTVQEQQLTLSKVLTTHHHWDHAGGNEKLLKLWQKE---L 163 Query: 107 DVYAAPD 113 DVY D Sbjct: 164 DVYGGDD 170 >gi|88703291|ref|ZP_01101007.1| hydroxyacylglutathione hydrolase [Congregibacter litoralis KT71] gi|88702005|gb|EAQ99108.1| hydroxyacylglutathione hydrolase [Congregibacter litoralis KT71] Length = 256 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Query: 51 GSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLR 96 G + ++VD G ++ LREQ LS+ +L TH H DH+ G+ L+ Sbjct: 21 GDGSALVVDPGDAAPVEAALREQELSLAGILITHHHFDHVGGLKALK 67 >gi|224476616|ref|YP_002634222.1| putative ribonuclease Z [Staphylococcus carnosus subsp. carnosus TM300] gi|254808665|sp|B9DNT1|RNZ_STACT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|222421223|emb|CAL28037.1| putative ribonuclease Z [Staphylococcus carnosus subsp. carnosus TM300] Length = 306 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 37/225 (16%) Query: 26 GACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTH 83 GA PT + R++ I+ + SN+ + D G Q+L + I+ + TH Sbjct: 9 GAALPT-----KERNTQAIALNLDPYSNSIWLFDAGEGTQHQILHHSIKLGKINHIFITH 63 Query: 84 PHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 H DHI+G+ GL R + + +P+ + P +K+ E+ +A R P+ Sbjct: 64 MHGDHIYGLPGLLTSRSFQGGENKPLTI-VGPRGIKNYVET---TLQASLSRLNYPVT-- 117 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------NVAYCTDVNAFPA 192 IE +D + G + A + HG + S G+R +VA ++ P Sbjct: 118 -FIEIDD-QLHYHHEGFTVSAYNL--NHG-VPSFGYRIEAPTTSGKIDVASLREIGMEPG 172 Query: 193 ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 ++++N D I + S K E + PK AI Sbjct: 173 PKYQEVKNSDSFIFN--------DKVYQSSDFKGEEKVGPKIAIF 209 >gi|154707223|ref|YP_001425097.1| hydroxyacylglutathione hydrolase [Coxiella burnetii Dugway 5J108-111] gi|161830842|ref|YP_001596265.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 331] gi|212213176|ref|YP_002304112.1| hydroxyacylglutathione hydrolase [Coxiella burnetii CbuG_Q212] gi|154356509|gb|ABS77971.1| hydroxyacylglutathione hydrolase [Coxiella burnetii Dugway 5J108-111] gi|161762709|gb|ABX78351.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 331] gi|212011586|gb|ACJ18967.1| hydroxyacylglutathione hydrolase [Coxiella burnetii CbuG_Q212] Length = 257 Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 VI+D G + L++Q L++ A+L TH H DH +GI G+ QK P VY Sbjct: 24 KQAAVIIDPGEAKPVLDFLKQQKLNLAAILVTHHHWDHTNGIQGIL-----QKHPAPVYG 78 Query: 111 A 111 + Sbjct: 79 S 79 >gi|195591960|ref|XP_002085704.1| GD14908 [Drosophila simulans] gi|194197713|gb|EDX11289.1| GD14908 [Drosophila simulans] Length = 348 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V + V+ P+ ++ ++EQ L++ VL TH H DH G + L + K+ + Sbjct: 107 VDTKTREAAVVDPVEPELVIKTVQEQQLTLSKVLTTHHHWDHAGGNEKLLKLWQKE---L 163 Query: 107 DVYAAPD 113 DVY D Sbjct: 164 DVYGGDD 170 >gi|289168017|ref|YP_003446286.1| protein VicX [Streptococcus mitis B6] gi|288907584|emb|CBJ22421.1| conserved protein VicX [Streptococcus mitis B6] Length = 269 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|258619969|ref|ZP_05715009.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258587702|gb|EEW12411.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 688 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q L E+ + AV+Y+H HADH G+ G+ L + + V A + H Sbjct: 185 DFVNQELGER--PVKAVVYSHAHADHFGGVKGIVSQELVDRGEVQVIAPKGFLNHAVAEN 242 Query: 123 RYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIP 163 A+ RT N + D I A G + IP Sbjct: 243 VLAGNAMSRRTTYQYGNALPKGATGQVDAAIGKGVAQGEVSLIP 286 >gi|222086575|ref|YP_002545109.1| hydrolase protein [Agrobacterium radiobacter K84] gi|221724023|gb|ACM27179.1| hydrolase protein [Agrobacterium radiobacter K84] Length = 214 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +N V+VD G D +Q +RE +++ A+ TH H DH G D +R Sbjct: 26 TNEGVVVDPGGDVDLILQTVRENNITLKAIWLTHGHIDHAGGADEVR 72 >gi|153208786|ref|ZP_01947018.1| metallo-beta-lactamase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165920929|ref|ZP_02219599.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 334] gi|212218149|ref|YP_002304936.1| hydroxyacylglutathione hydrolase [Coxiella burnetii CbuK_Q154] gi|120575748|gb|EAX32372.1| metallo-beta-lactamase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|165916777|gb|EDR35381.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 334] gi|212012411|gb|ACJ19791.1| hydroxyacylglutathione hydrolase [Coxiella burnetii CbuK_Q154] Length = 257 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 VI+D G + L++Q L++ A+L TH H DH +GI G+ QK P VY Sbjct: 24 KQAAVIIDPGEAKPVLDFLKQQKLNLAAILVTHHHWDHTNGIQGIL-----QKHPAPVYG 78 Query: 111 A 111 + Sbjct: 79 S 79 >gi|331003772|ref|ZP_08327266.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412155|gb|EGG91550.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] Length = 264 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 28/166 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS-----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G R L I + TH H+DHI G++ +K I Sbjct: 20 ENTHILVDAGISNKKIETRLNELGLCGRDISGIFLTHEHSDHIAGLE-----VFVRKNEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA+ +K+L D Y I + I + I + G ++ + Sbjct: 75 PVYASEGTLKYL----------KDRDKYSKITDYFHIIESKRHIRL----GDLDVLAFDI 120 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R + +A TD+ + + + L NLD L+I+A Sbjct: 121 DHDANEPFGYRVESGDKKIAVATDLGRYTKDIVGYLSNLDALLIEA 166 >gi|270292776|ref|ZP_06198987.1| VicX protein [Streptococcus sp. M143] gi|270278755|gb|EFA24601.1| VicX protein [Streptococcus sp. M143] Length = 269 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|229824803|ref|ZP_04450872.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] gi|229790806|gb|EEP26920.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] Length = 285 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 27/156 (17%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 IV++ DF + S+ + TH HADHI+G+ L +K I V+A+ + Sbjct: 45 IVESLSDFSIDTE-----SVKGIFITHEHADHINGL-----MMLMKKYKIPVFASLGTLS 94 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + + D +Y ++ I + P C IP H +GF Sbjct: 95 ELTKCRGF------DNSYKKLMYKI---EANRPFCFNDFKVNCFNIP----HDAAEPMGF 141 Query: 177 RF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 F V+ CTD E + L+ L+I+A Sbjct: 142 NFEKYDTKVSVCTDFGMITDEIEDGLKGSQGLVIEA 177 >gi|152972967|ref|YP_001338113.1| carbon-phosphorus lyase complex accessory protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957816|gb|ABR79846.1| phosphonate metabolism [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 252 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 63/275 (22%), Positives = 101/275 (36%), Gaps = 47/275 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG----SNTTVIVDTGPDF 64 + G G + VP D AC RR R R G ++ ++D G Sbjct: 7 LTGTGGAQLVPVFGCDCAAC-------RRARREENHRRRPCSGVVTFNSAVTLLDAGRPD 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLFES 121 M+ S VL TH H DH+ G+ LR G + P D D +KH Sbjct: 60 LME--HHPAGSFQQVLLTHYHLDHVQGLFPLRWGVGASIPVYGPPDDAGCDDLLKH---- 113 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 L D ++ V P V+ N + P+ H ++ + G+ Sbjct: 114 -----PGLLDFSH--TVTPFVMFNLQ----------GLRVTPLPLNHSKL-TFGYLLESA 155 Query: 179 -GNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 +A+ +D P ++L+ L N +IID + +H L+ ++I Sbjct: 156 HSRLAWLSDTAGLPDKTLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRSLNQVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ILTH+ D M+ P+ +DGM+ + Sbjct: 216 PRVILTHISHQFDVWMMDNPLPTGFEAGYDGMEIA 250 >gi|301156056|emb|CBW15527.1| predicted metal-binding enzyme [Haemophilus parainfluenzae T3T1] Length = 209 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%) Query: 54 TTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 I+D G + +Q + E L++ AVL TH H DH+ + +R +F I+++ + Sbjct: 24 NAAIIDPGGNAENLIQRIEELELNLKAVLLTHGHLDHVGAAEAIRDHF-----NIEIWGS 78 Query: 112 PDCMKHLFESF 122 + + LFES Sbjct: 79 QEEDRFLFESL 89 >gi|16800013|ref|NP_470281.1| hypothetical protein lin0944 [Listeria innocua Clip11262] gi|16413403|emb|CAC96175.1| lin0944 [Listeria innocua Clip11262] Length = 376 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + +D +L THPHADHI D Sbjct: 60 TTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNAD 103 >gi|110799559|ref|YP_696056.1| ribonuclease Z [Clostridium perfringens ATCC 13124] gi|123148750|sp|Q0TQN4|RNZ_CLOP1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110674206|gb|ABG83193.1| ribonuclease Z [Clostridium perfringens ATCC 13124] Length = 316 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +G + G M+V SID + +H H DHI+G+ GL R D+Y Sbjct: 28 KGRKILLDCGEGTQVTMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIY 87 Query: 110 -AAPDCMKHLFESF 122 P +K + E F Sbjct: 88 IIGPKGIKEVIEGF 101 >gi|306829562|ref|ZP_07462752.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] gi|304428648|gb|EFM31738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] Length = 269 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|186685324|ref|YP_001868520.1| ribonuclease Z [Nostoc punctiforme PCC 73102] gi|254808652|sp|B2J3C7|RNZ_NOSP7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|186467776|gb|ACC83577.1| ribonuclease Z [Nostoc punctiforme PCC 73102] Length = 319 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 69/184 (37%), Gaps = 21/184 (11%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q++R + + + + TH H DHI Sbjct: 13 PTRSRNVSSVAL-RLPQRAE--LWLFDCGEGTQHQIMRSELKISQLSRIFITHMHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL ID+Y P ++ + RY + + P VI +D Sbjct: 70 GLMGLLATCGLAGNVERIDIYGPPGLNDYIQSASRYSYTHFSYPIKVHAIRPGVIYEDDY 129 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 S G + H RI++ G+R VA F E + L I Sbjct: 130 FTV--SCGNL---------HHRITAFGYR---VAEKDRTGRFDVEKAKALDIPSGRIYGQ 175 Query: 209 LKNG 212 LK G Sbjct: 176 LKRG 179 >gi|307704958|ref|ZP_07641846.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] gi|307621468|gb|EFO00517.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] Length = 269 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +DA+L TH H+DHIHG+ L +K +D+YA + + E+ +Y K Sbjct: 54 LDAILITHEHSDHIHGVG-----VLARKYGMDLYANEKTWQAM-ENSKYLGK 99 >gi|297617648|ref|YP_003702807.1| beta-lactamase [Syntrophothermus lipocalidus DSM 12680] gi|297145485|gb|ADI02242.1| beta-lactamase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 303 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%) Query: 56 VIVDTGPD----FYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 +++D G D F + LRE +V ID ++ THPHADHI G+D Sbjct: 78 MLIDAGDDQNAPFIVDYLREHRVRVIDYLVATHPHADHIGGLD 120 >gi|296269126|ref|YP_003651758.1| DNA internalization-related competence protein ComEC/Rec2 [Thermobispora bispora DSM 43833] gi|296091913|gb|ADG87865.1| DNA internalization-related competence protein ComEC/Rec2 [Thermobispora bispora DSM 43833] Length = 859 Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G V+VDTGPD + LR+ + + V+ THPH DH+ G+ G LRG Sbjct: 615 GPGAGVVVDTGPDPARAGRCLRDLGIRRVPLVVLTHPHLDHVGGLAGVLRG 665 >gi|313125287|ref|YP_004035551.1| metal-dependent hydrolase, beta-lactamase superfamily i [Halogeometricum borinquense DSM 11551] gi|312291652|gb|ADQ66112.1| metal-dependent hydrolase, beta-lactamase superfamily I [Halogeometricum borinquense DSM 11551] Length = 274 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 RTR S+ V + ++++D PDF Q L +V DA L TH H DHI G+ Sbjct: 33 ERTRFSV---HVENDRTGESLLIDFSPDFRQQFLTHEVPLPDAGLITHVHFDHIDGL 86 >gi|91203639|emb|CAJ71292.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 264 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 53/243 (21%) Query: 56 VIVDTGPDFYMQVLREQV----LSIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPI 106 V+VD GP ++ L + + +DA++ +H H DH ++ + G F K+ Sbjct: 41 VLVDPGPGCLVRCLSSRPKMDPMQLDAIILSHRHLDHAADVNVMIEAMTEGGFKKRG--- 97 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA D + F Y R Y I I+I+ + + GV P+ Sbjct: 98 TLYAPEDALTEDPVVFHYV------RNY--ITKIIIIKEGG---RYQLSDGVYFETPLKH 146 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------ 216 QH + G F +++ D FP L K N D LII+ ++ Sbjct: 147 QHPS-ETYGINFITPEYTISHIVDTRYFP--DLLKCYNGDTLIINVVRYNADRDTRKWLY 203 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV------------VPAFDGM 264 H ++ + + + + PK +L H + + LK+ P +V + A DGM Sbjct: 204 HLTIRDVREIVTTLKPKTTLLNHFGMTM-----LKAHPHKVAEQLSAETGLNIIAASDGM 258 Query: 265 QFS 267 +F+ Sbjct: 259 RFN 261 >gi|330508890|ref|YP_004385318.1| ribonuclease Z [Methanosaeta concilii GP-6] gi|328929698|gb|AEB69500.1| ribonuclease Z [Methanosaeta concilii GP-6] Length = 305 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 14/101 (13%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIH 90 P R S++ I+R E ++ D G Q++R + ++ ++ + TH HADHI Sbjct: 14 PTPERNPSAILINREGE-----MLLFDCGEGTQRQMMRARTGMMRLNYIFLTHLHADHIL 68 Query: 91 GIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKAL 129 GI GL Q R PI + A P L E CFK++ Sbjct: 69 GIPGLLETMAFQGRVEPITI-AGPIHTARLVE----CFKSV 104 >gi|126667041|ref|ZP_01738016.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Marinobacter sp. ELB17] gi|126628447|gb|EAZ99069.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Marinobacter sp. ELB17] Length = 322 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIH 90 P R ++L +S G +VD G Q+LR V+ + A+ TH H DH Sbjct: 13 PTRSRNVTALALS---HSGHKPWYLVDCGEGTQHQLLRAHYSVMQLRAIFITHIHGDHTF 69 Query: 91 GIDGL--RGYFLKQKRPIDVYA 110 G+ GL L + P+D+ A Sbjct: 70 GLPGLLTSASMLGRTEPLDIVA 91 >gi|124267715|ref|YP_001021719.1| hydroxyacylglutathione hydrolase [Methylibium petroleiphilum PM1] gi|124260490|gb|ABM95484.1| Hydroxyacylglutathione hydrolase [Methylibium petroleiphilum PM1] Length = 259 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 54 TTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G + L E+ L + A++ TH H DH+ G+D LR + P+ Sbjct: 22 SAIVVDPGEAAPVTRALDERSLKLAAIVVTHHHGDHVGGVDALRARLPDGRGPV 75 >gi|282859461|ref|ZP_06268566.1| ribonuclease Z [Prevotella bivia JCVIHMP010] gi|282587689|gb|EFB92889.1| ribonuclease Z [Prevotella bivia JCVIHMP010] Length = 304 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 35/175 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT + SS ++ + ++ ++D G MQ+ Sbjct: 8 ILGCGSAL-------------PT----MKHASSSQVVELRDK----LFMIDCGEGTQMQL 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH GI G+ F R P+ +YA L ++ + Sbjct: 47 RRYRIHFSRIQAVFLSHLHGDHCFGIPGMISTFGMTGRTAPLHIYAPASYEPILQQTLHF 106 Query: 125 CFKALDDRT-YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++L+ + Y P ++ + + +E IP+ QH R+ GF F Sbjct: 107 FCQSLEFKVEYHP------LDTTKQAVIFEDRSLTVETIPL--QH-RVDCCGFLF 152 >gi|254786146|ref|YP_003073575.1| hydroxyacylglutathione hydrolase [Teredinibacter turnerae T7901] gi|237684030|gb|ACR11294.1| hydroxyacylglutathione hydrolase [Teredinibacter turnerae T7901] Length = 261 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 53 NTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N +++D G + VL+E+ LS A+L TH H DH+ GI L+ +F Sbjct: 23 NNALVIDPGEAAPVIAVLKERGLSATAILLTHRHWDHVDGIPELQEHF 70 >gi|320161011|ref|YP_004174235.1| hypothetical protein ANT_16090 [Anaerolinea thermophila UNI-1] gi|319994864|dbj|BAJ63635.1| hypothetical protein ANT_16090 [Anaerolinea thermophila UNI-1] Length = 211 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 47 VSERGSNTTVIVDT--GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK- 103 V++ S+T +I+D G ++ E+ L+I + TH H DHI G++ +R +F + + Sbjct: 20 VADSESHTAIIIDPAFGSSAVVKTCLEKQLTIQGIWITHAHFDHIGGVEAVRKHFPQAQI 79 Query: 104 --RPID 107 P+D Sbjct: 80 ALHPLD 85 >gi|302335766|ref|YP_003800973.1| DNA internalization-related competence protein ComEC/Rec2 [Olsenella uli DSM 7084] gi|301319606|gb|ADK68093.1| DNA internalization-related competence protein ComEC/Rec2 [Olsenella uli DSM 7084] Length = 798 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 54 TTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + V+VD+GPD + ++ R V +DAV+ TH H DH G+ L G Sbjct: 561 SAVLVDSGPDERVADELARLHVFRLDAVVLTHLHDDHYGGLSSLCG 606 >gi|295109831|emb|CBL23784.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus obeum A2-162] Length = 265 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 27/166 (16%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT V+VDTG + + L +D +L TH H+DHI G+ + +K I Sbjct: 20 ENTHVLVDTGISGKKMEAGLNSLDLTGRDLDGILITHEHSDHIKGLG-----VISRKYGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + + D + I E D+ + P Sbjct: 75 PIYTTGGTVDAMVRT--NALGKIPDGIFHEIKEDEPFEIGDLTVN-----------PFSI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +G+R +V TD+ + +E LQNLD L+++A Sbjct: 122 PHDAAQPVGYRLECDGHSVGIATDLGKYNDYIIENLQNLDALLLEA 167 >gi|6687474|emb|CAB64977.1| YycJ protein [Enterococcus faecalis] Length = 249 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANEKTWQAMDPMIGKVDVAQKHIFE 108 >gi|328882396|emb|CCA55635.1| ComEC or Rec2-related protein [Streptomyces venezuelae ATCC 10712] Length = 920 Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G + V+VD GPD + LRE V + +L TH HADH+ G+ G LRG Sbjct: 656 GGDAAVVVDAGPDPVPVDRCLRELGVRRVPLLLLTHFHADHVAGLPGVLRG 706 >gi|148978687|ref|ZP_01815090.1| carbon-phosphorus lyase complex accessory protein [Vibrionales bacterium SWAT-3] gi|145962225|gb|EDK27508.1| carbon-phosphorus lyase complex accessory protein [Vibrionales bacterium SWAT-3] Length = 255 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 89/254 (35%), Gaps = 55/254 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG S VP D C NP RR +SS + E ++ PD Sbjct: 5 MLGTANSAMVPVYGCDCSVCVSAFENPSLRREKSSAFL----EHNGKFLLLDANAPDL-- 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL----F 119 + R SID +L TH H DH+ + LR G + P D D KH F Sbjct: 59 -MHRFPAGSIDQILLTHYHMDHVQSLFDLRWGVGDKISVISPDDPLGCDDLYKHPGILGF 117 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 FK+ D + I P+ H ++ LG+ F Sbjct: 118 SQRAQAFKSFDWQG-------------------------ITVTPLPLNHSKL-CLGYCFE 151 Query: 179 ---GNVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGL-------HSSHFSLSESLKK 226 +AY TD P ++ L+ +D+LI D + +S+H L Sbjct: 152 LDGKRLAYLTDTVGLPKQTERWLKEFPVDWLITDCNYPPIEDPQVRSNSNHNDFHHILDI 211 Query: 227 IELINPKNAILTHM 240 E PKN L H+ Sbjct: 212 DETCRPKNLGLIHV 225 >gi|322369267|ref|ZP_08043832.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] gi|320550999|gb|EFW92648.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] Length = 192 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 53 NTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + TV+VDTG +F + + E V +DAV+ TH H DH+ +D + F Sbjct: 22 DRTVLVDTGSNFDAVSRVEEAVGDLDAVIVTHTHPDHVGTLDAVTEAF 69 >gi|199598729|ref|ZP_03212143.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] gi|258508359|ref|YP_003171110.1| ribonuclease Z [Lactobacillus rhamnosus GG] gi|199590417|gb|EDY98509.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] gi|257148286|emb|CAR87259.1| Ribonuclease Z [Lactobacillus rhamnosus GG] gi|259649673|dbj|BAI41835.1| hydrolase [Lactobacillus rhamnosus GG] Length = 319 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHI 89 +P R SSL + + ER N + D G Q+L+ + I V TH H DHI Sbjct: 12 SPSKVRNVSSLALKLLDER--NEVWLFDVGEGTQHQILQTTIKPRKIAKVFITHLHGDHI 69 Query: 90 HGIDGLRGYFLKQ--KRPIDVYAAP 112 G+ G Q P+ +Y P Sbjct: 70 FGLPGFLASRANQGGTEPLTIYGPP 94 >gi|78484370|ref|YP_390295.1| beta-lactamase-like [Thiomicrospira crunogena XCL-2] gi|78362656|gb|ABB40621.1| beta-lactamase-like protein [Thiomicrospira crunogena XCL-2] Length = 465 Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 47/216 (21%) Query: 75 SIDAVLYTHPHADHIHGI-----DGLRGYFLKQKRPIDVYAA--PDCMKHLFESFRYCFK 127 +D +L TH H DH+ I +G +G + + ID+ D K + E ++ FK Sbjct: 53 KVDVLLITHAHLDHVGRIPKLVKEGFKGRIISLRATIDIMEVILMDSAKIMHEDYKTAFK 112 Query: 128 AL-----DDRTYPPIV-------------------NPIVIENNDVPICMKSAGGVIEAIP 163 +D+ PP+ P I N DV ++AG ++ + Sbjct: 113 KAQRRGEEDKVTPPLYTLEDVQSVFDLDIQYAEYDQPTTI-NKDVKATFRNAGHILGSAT 171 Query: 164 I---LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 + ++ + ++ F G++ DV P ES +QN D L I++ +H +L Sbjct: 172 VQIDFKEEEQSKTVVFS-GDLGNDEDVIMPPPES---VQNADALYIESTYGD--RNHRAL 225 Query: 221 SESLKKIE------LINPKNAILTHMHVDLDYDMVL 250 S+++ + L+N N ++ V+ +++L Sbjct: 226 KGSIQEFKEAVINTLMNQGNILIPSFAVERSQEILL 261 >gi|229552154|ref|ZP_04440879.1| ribonuclease Z [Lactobacillus rhamnosus LMS2-1] gi|258539568|ref|YP_003174067.1| ribonuclease Z [Lactobacillus rhamnosus Lc 705] gi|229314456|gb|EEN80429.1| ribonuclease Z [Lactobacillus rhamnosus LMS2-1] gi|257151244|emb|CAR90216.1| Ribonuclease Z [Lactobacillus rhamnosus Lc 705] Length = 319 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHI 89 +P R SSL + + ER N + D G Q+L+ + I V TH H DHI Sbjct: 12 SPSKVRNVSSLALKLLDER--NEVWLFDVGEGTQHQILQTTIKPRKIAKVFITHLHGDHI 69 Query: 90 HGIDGLRGYFLKQ--KRPIDVYAAP 112 G+ G Q P+ +Y P Sbjct: 70 FGLPGFLASRANQGGTEPLTIYGPP 94 >gi|313624389|gb|EFR94408.1| putative secreted lipoprotein [Listeria innocua FSL J1-023] Length = 320 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Query: 54 TTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 TT+++DTG D + L+E + +D +L THPHADHI D Sbjct: 4 TTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNAD 47 >gi|29832035|ref|NP_826669.1| hypothetical protein SAV_5492 [Streptomyces avermitilis MA-4680] gi|29609153|dbj|BAC73204.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 840 Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 10/54 (18%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDG-LRG 97 G T V+VD GPD L ++ LS I V+ TH HADH+ G+ G LRG Sbjct: 660 GDGTGVVVDAGPD---PALVDRCLSALGVDRIPLVVLTHFHADHVAGLPGVLRG 710 >gi|14520974|ref|NP_126449.1| hypothetical protein PAB0518 [Pyrococcus abyssi GE5] gi|5458191|emb|CAB49680.1| Beta lactamase-like protein [Pyrococcus abyssi GE5] Length = 272 Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%) Query: 56 VIVDTGPDFYMQVLREQVLSIDA----VLY-THPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V+VDTG D + + L IDA VL+ TH H DH GL+ + ++ PI+VYA Sbjct: 39 VLVDTGTDGKVLLNNMHELGIDANDIDVLFITHGHYDHT---GGLKEFLKERSEPIEVYA 95 Query: 111 AP 112 P Sbjct: 96 HP 97 >gi|318061207|ref|ZP_07979928.1| integral membrane protein [Streptomyces sp. SA3_actG] Length = 877 Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGP--DFYMQVL-REQVLSIDAVLYTHPHADHIHGIDG-LRG 97 G+ T V+VD GP D L R V + VL +H HADH+ G++G LRG Sbjct: 629 GAGTAVVVDAGPEPDRVAGCLDRLGVRRVPLVLLSHFHADHVAGLEGVLRG 679 >gi|331268257|ref|YP_004394749.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329124807|gb|AEB74752.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 262 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 62/236 (26%) Query: 53 NTTVIVDTG-PDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N+++++D G P +++ E + ID + TH H DH+ G+ L ++ I Sbjct: 21 NSSILIDAGLPGKHIEKALESINKNPNEIDGIFVTHEHIDHVKGVG-----VLSRRYNIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-VIENNDVPICMKSAGGVIEAIPILQ 166 +YA +D T+ ++ I I+ ++ I K+ I+ + I Sbjct: 76 IYA-------------------NDLTWKSMLKNIGKIKEENIKIICKNKSVTIKNMDICN 116 Query: 167 ---QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------- 208 H I +G+ V TD+ F E E +N D +++++ Sbjct: 117 YSISHDAIDPVGYSIYAGKKKVCIATDLGYFSEEVEENTKNADIVLLESNHDIEMLKFGP 176 Query: 209 ---------LKNGLHSSHFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVL 250 L N H S+ +++ + N KN IL H+ + DL Y+ V+ Sbjct: 177 YPYSLKKRILSNVGHLSNEDCGKAVVSMTQNNCKNIILGHLSKTNNYPDLAYETVV 232 >gi|323456524|gb|EGB12391.1| hypothetical protein AURANDRAFT_3503 [Aureococcus anophagefferens] Length = 353 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYF- 99 +S S R TT + D G +QV R ++ +DA+ TH H DH G+ GL Sbjct: 19 VSCTSLRYDGTTWLFDAGEGSQIQVQRSHLVHPGKVDAIFVTHLHGDHSFGLPGLMCLIG 78 Query: 100 ---LKQKRPIDVYAAPDCMKHLFESFR 123 +K P++V+ +L S + Sbjct: 79 QNRVKGDAPVEVFGPQGLRLYLRASLK 105 >gi|289435320|ref|YP_003465192.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171564|emb|CBH28110.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 306 Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LS-IDAVLYTHPHADHIH 90 P R +S+ +S ++ER N + D G Q+L Q+ LS ++ + TH H DHI Sbjct: 13 PSRGRNVTSIALSMLNER--NAIWLFDCGEATQHQILLSQIKLSKLEKIFITHMHGDHIF 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|295114807|emb|CBL35654.1| Zn-dependent hydrolases, including glyoxylases [butyrate-producing bacterium SM4/1] Length = 215 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 47 VSERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGID------GLRGY 98 VS + V++D G + + L+ L A+L TH H+DHI G++ G + Y Sbjct: 18 VSNEETREAVVIDPGDQGELIAEALKRDSLQTRAILLTHGHSDHIGGLEAVKKATGAKVY 77 Query: 99 FLKQKRPI 106 L Q+R + Sbjct: 78 ALDQEREL 85 >gi|257053945|ref|YP_003131778.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692708|gb|ACV13045.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 191 Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 56 VIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G DF + +RE V +DAV+ TH H DH+ +D + F Sbjct: 25 VLVDVGNDFDVVARVREHVEDLDAVVLTHTHPDHVGNLDAVTEAF 69 >gi|325282980|ref|YP_004255521.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324314789|gb|ADY25904.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 297 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 10/75 (13%) Query: 44 ISRVS-ERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +S V+ + G+ +IVDTG D ++ L Q L+ A+L TH HADH HG + Sbjct: 17 VSSVAVDNGAGGALIVDTGLDDAQARKLLRGLEAQGLAPAAILNTHSHADH-HGGN---A 72 Query: 98 YFLKQKRPIDVYAAP 112 + LK+ + VYA P Sbjct: 73 HILKKHPDLPVYAPP 87 >gi|319651456|ref|ZP_08005584.1| ribonuclease Z [Bacillus sp. 2_A_57_CT2] gi|317396771|gb|EFV77481.1| ribonuclease Z [Bacillus sp. 2_A_57_CT2] Length = 312 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P R SS+ + + ERGS + D G Q+L + I+ + TH H DHI+ Sbjct: 13 PAKLRNVSSMALKLLDERGS--IWLFDCGEATQHQILHTSIKPRRIEKIFITHLHGDHIY 70 Query: 91 GIDGL 95 G+ GL Sbjct: 71 GLPGL 75 >gi|88602554|ref|YP_502732.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88188016|gb|ABD41013.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 654 Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 27/57 (47%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + AV+Y+HPHADH G+ G+ + + + A M+H Y A+ R Sbjct: 171 VKAVIYSHPHADHYQGVKGVITEEEVKTGDVQIIAPEHFMEHALSENVYAGNAMQRR 227 >gi|329576536|gb|EGG58043.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1467] Length = 268 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANEKTWQAMDPMIGKVDVAQKHIFE 108 >gi|325294334|ref|YP_004280848.1| metal-dependent hydrolase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064782|gb|ADY72789.1| putative metal-dependent hydrolase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 237 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 10/71 (14%) Query: 52 SNTTVIVDTG--PDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S+ T++ DTG P+ + L + + +D V +H H DH+ G+ Y LK+ R Sbjct: 29 SDETILFDTGAKPEVLAENLEKFGVNIEEVDVVFISHNHWDHVGGLP----YILKKNRDF 84 Query: 107 DVYA-APDCMK 116 +++ PDC++ Sbjct: 85 ELFVPEPDCVE 95 >gi|295838944|ref|ZP_06825877.1| integral membrane protein [Streptomyces sp. SPB74] gi|295827257|gb|EDY42433.2| integral membrane protein [Streptomyces sp. SPB74] Length = 369 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRG 97 G+ + V+VD GPD + R V + VL +H HADH+ G++G LRG Sbjct: 119 GAGSAVVVDAGPDPDRVAACLDRLGVRRVPLVLLSHFHADHVAGLEGVLRG 169 >gi|51893566|ref|YP_076257.1| putative Zn-dependent hydrolase [Symbiobacterium thermophilum IAM 14863] gi|51857255|dbj|BAD41413.1| putative Zn-dependent hydrolase [Symbiobacterium thermophilum IAM 14863] Length = 206 Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 6/67 (8%) Query: 52 SNTTVIVDTG-PDFYMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +++D G PD ++Q + E L++ ++ TH H DHI G+D ++G+ P+ ++ Sbjct: 23 TRQALVIDPGVPDPWIQSCVMENDLTVVGIVLTHGHLDHIGGVDWVKGW---SGAPVAIH 79 Query: 110 AA-PDCM 115 A DC+ Sbjct: 80 EADADCL 86 >gi|323484245|ref|ZP_08089613.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323694768|ref|ZP_08108926.1| VicX protein [Clostridium symbiosum WAL-14673] gi|323402397|gb|EGA94727.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323501205|gb|EGB17109.1| VicX protein [Clostridium symbiosum WAL-14673] Length = 263 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 24/138 (17%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D +L TH H+DHI G+ L +K +Y+ + ++ + K+L D YP Sbjct: 47 LDGILITHEHSDHIKGLG-----VLARKYGTPIYSTKETLEEIGN-----VKSLGD--YP 94 Query: 136 -PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAF 190 + PI +DV + G +E P H + + +R N VA TD+ + Sbjct: 95 RELFRPIC---HDVDFYI----GDLEIKPFRIDHDAANPVAYRVQNNRRSVAVATDMGHY 147 Query: 191 PAESLEKLQNLDFLIIDA 208 ++ LQ LD +++++ Sbjct: 148 SQYIIDHLQGLDAILLES 165 >gi|254773457|ref|ZP_05214973.1| metallo-beta-lactamase family protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 267 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGL 95 GS+ VIVD GPD + R L I VL +H H DH GID L Sbjct: 48 GSDELVIVDPGPDDDEHIARIAALGRIALVLISHRHGDHTDGIDKL 93 >gi|167758797|ref|ZP_02430924.1| hypothetical protein CLOSCI_01139 [Clostridium scindens ATCC 35704] gi|167663537|gb|EDS07667.1| hypothetical protein CLOSCI_01139 [Clostridium scindens ATCC 35704] Length = 206 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + V+VD P + + ++ + + I+A+L TH H DHI GIDG F P+ VY Sbjct: 23 TRQAVVVDPAACPSYLLSHIKSEGIKIEALLLTHAHFDHIMGIDGFVDEF---HVPVYVY 79 >gi|328952408|ref|YP_004369742.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452732|gb|AEB08561.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 312 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 ++ L V I+A+ +H H DH GL+ +++ P++VY PDC Sbjct: 84 LEALERSVEDIEALFLSHGHPDH---YGGLQEVLARRQSPLEVYLHPDC 129 >gi|182624689|ref|ZP_02952470.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177910086|gb|EDT72480.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 291 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D + + +ID + THPH DHI G+D + F + + Sbjct: 61 MLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DVKSFY 115 Query: 111 APDCMKHLFESFRYCFKALDDR--TYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQ 167 AP H +++ KA+ + I I+ D + + S P+ Q Sbjct: 116 APKVA-HTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTEVQVYS--------PVKSQ 166 Query: 168 HGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 + + S + +G ++ +A E L L D LK G H SH S SE Sbjct: 167 YEELNNYSSVMKISYGQNSFMFTGDAESLVEKEILNENKDLKADVLKLGHHGSHSSTSEE 226 Query: 224 LKKIELINPKNAILT 238 ++ ++P AI++ Sbjct: 227 F--LKAVDPSIAIVS 239 >gi|29375772|ref|NP_814926.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227518451|ref|ZP_03948500.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227552981|ref|ZP_03983030.1| beta-lactamase [Enterococcus faecalis HH22] gi|229546125|ref|ZP_04434850.1| beta-lactamase [Enterococcus faecalis TX1322] gi|229550314|ref|ZP_04439039.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|255973086|ref|ZP_05423672.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255976125|ref|ZP_05426711.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256618780|ref|ZP_05475626.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256762200|ref|ZP_05502780.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256852845|ref|ZP_05558215.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256958689|ref|ZP_05562860.1| vicX protein [Enterococcus faecalis DS5] gi|256962213|ref|ZP_05566384.1| vicX protein [Enterococcus faecalis Merz96] gi|256965403|ref|ZP_05569574.1| MicC [Enterococcus faecalis HIP11704] gi|257077957|ref|ZP_05572318.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|257082846|ref|ZP_05577207.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|257085544|ref|ZP_05579905.1| vicX protein [Enterococcus faecalis Fly1] gi|257086550|ref|ZP_05580911.1| VicX protein [Enterococcus faecalis D6] gi|257089607|ref|ZP_05583968.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415814|ref|ZP_05592808.1| vicX protein [Enterococcus faecalis AR01/DG] gi|257419023|ref|ZP_05596017.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257422892|ref|ZP_05599882.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|293383240|ref|ZP_06629156.1| VicX protein [Enterococcus faecalis R712] gi|293387605|ref|ZP_06632151.1| VicX protein [Enterococcus faecalis S613] gi|294781112|ref|ZP_06746462.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|300859771|ref|ZP_07105859.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|307268691|ref|ZP_07550060.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|307273516|ref|ZP_07554759.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|307274479|ref|ZP_07555662.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|307279015|ref|ZP_07560073.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|307288502|ref|ZP_07568488.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|307291180|ref|ZP_07571065.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|312899668|ref|ZP_07758992.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|312903947|ref|ZP_07763116.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|312907172|ref|ZP_07766163.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|312909791|ref|ZP_07768639.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|312951042|ref|ZP_07769950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|29343233|gb|AAO80996.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227074129|gb|EEI12092.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227177890|gb|EEI58862.1| beta-lactamase [Enterococcus faecalis HH22] gi|229304577|gb|EEN70573.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|229308649|gb|EEN74636.1| beta-lactamase [Enterococcus faecalis TX1322] gi|255964104|gb|EET96580.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255968997|gb|EET99619.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256598307|gb|EEU17483.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256683451|gb|EEU23146.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256711304|gb|EEU26342.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256949185|gb|EEU65817.1| vicX protein [Enterococcus faecalis DS5] gi|256952709|gb|EEU69341.1| vicX protein [Enterococcus faecalis Merz96] gi|256955899|gb|EEU72531.1| MicC [Enterococcus faecalis HIP11704] gi|256985987|gb|EEU73289.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|256990876|gb|EEU78178.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|256993574|gb|EEU80876.1| vicX protein [Enterococcus faecalis Fly1] gi|256994580|gb|EEU81882.1| VicX protein [Enterococcus faecalis D6] gi|256998419|gb|EEU84939.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157642|gb|EEU87602.1| vicX protein [Enterococcus faecalis ARO1/DG] gi|257160851|gb|EEU90811.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257164716|gb|EEU94676.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|291079418|gb|EFE16782.1| VicX protein [Enterococcus faecalis R712] gi|291082937|gb|EFE19900.1| VicX protein [Enterococcus faecalis S613] gi|294451790|gb|EFG20242.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|295112755|emb|CBL31392.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Enterococcus sp. 7L76] gi|300850589|gb|EFK78338.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|306497834|gb|EFM67366.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|306500577|gb|EFM69908.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|306504140|gb|EFM73352.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|306508873|gb|EFM77960.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|306509793|gb|EFM78820.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|306515003|gb|EFM83549.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|310626200|gb|EFQ09483.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|310630997|gb|EFQ14280.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|310632667|gb|EFQ15950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|311289749|gb|EFQ68305.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|311293174|gb|EFQ71730.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|315027750|gb|EFT39682.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2137] gi|315029158|gb|EFT41090.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4000] gi|315031525|gb|EFT43457.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0017] gi|315035059|gb|EFT46991.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0027] gi|315145508|gb|EFT89524.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2141] gi|315147679|gb|EFT91695.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4244] gi|315151381|gb|EFT95397.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0012] gi|315154079|gb|EFT98095.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0031] gi|315157366|gb|EFU01383.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0043] gi|315158429|gb|EFU02446.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0312] gi|315162571|gb|EFU06588.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0645] gi|315165414|gb|EFU09431.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1302] gi|315166592|gb|EFU10609.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1341] gi|315169879|gb|EFU13896.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1342] gi|315172770|gb|EFU16787.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1346] gi|315575744|gb|EFU87935.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309B] gi|315578296|gb|EFU90487.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0630] gi|315579812|gb|EFU92003.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309A] gi|323480430|gb|ADX79869.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] gi|327534822|gb|AEA93656.1| beta-lactamase [Enterococcus faecalis OG1RF] Length = 268 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANEKTWQAMDPMIGKVDVAQKHIFE 108 >gi|152972931|ref|YP_001338077.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892544|ref|YP_002917278.1| metal-dependent hydrolase-like protein [Klebsiella pneumoniae NTUH-K2044] gi|150957780|gb|ABR79810.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544860|dbj|BAH61211.1| similar to metal-dependent hydrolases of the beta-lactamase superfamily III [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 256 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 53 NTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDV 108 N ++D GP + + +V IDA+ +TH H DH G+ L ++ +++P+ + Sbjct: 28 NKQWLIDCGPTVPRALWQRGGEVNDIDAIYFTHVHPDHCTGLTALLNHWKSYSRQKPVII 87 Query: 109 YAAP 112 Y P Sbjct: 88 YCQP 91 >gi|111225096|ref|YP_715890.1| metallo-beta-lactamase family hydrolase [Frankia alni ACN14a] gi|111152628|emb|CAJ64369.1| putative hydrolase of the metallo-beta-lactamase superfamily [Frankia alni ACN14a] Length = 561 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 29/134 (21%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA--------PD 113 PDF +R+++ IDA++ TH H DHI + Y L+++R I + Sbjct: 65 PDF--TAIRDRLADIDALILTHAHEDHIGAVP----YLLRERRDIPIVGTRLTLALLNAK 118 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVI--------EA 161 +H ++ + + TY P N+ +P + +++ G++ + Sbjct: 119 LAEHRIKAVTQEIREEERHTYGPFECEFFAVNHSIPDAVAVAIRTEAGLVLHTGDFKMDQ 178 Query: 162 IPILQQHGRISSLG 175 +P+ GR++ LG Sbjct: 179 LPL---DGRLTDLG 189 >gi|325571473|ref|ZP_08146973.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325155949|gb|EGC68145.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 268 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANTKTWQAMDPMIGNVAVEQKHIFE 108 >gi|313619699|gb|EFR91321.1| putative secreted lipoprotein [Listeria innocua FSL S4-378] Length = 112 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 45 SRVSERGSNTTVIVDTG---PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 S + + TT+++DTG D + L+E + +D +L THPHADHI D Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNAD 103 >gi|254490530|ref|ZP_05103716.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxidans DMS010] gi|224464274|gb|EEF80537.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxydans DMS010] Length = 295 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 88/225 (39%), Gaps = 36/225 (16%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGID--GLR 96 ER ++T+I G F V R + ID + TH H+DHI G D + Sbjct: 39 ERFGSSTLIEHKGKYFLFDVGRGATIRLSQIGMYPSDIDNIFLTHLHSDHITGFDDFWIT 98 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 G ++ ++VY PD K E + F D Y + + ++ +V + G Sbjct: 99 GGIWQRANTLNVY-GPDGTKSFVEHTQGAFSL--DAFYREKQSSLNLKGLEVNVTEIKEG 155 Query: 157 GV-----IEAIPILQQHGRIS-SLGFRFGNVAYCTDVNA---FPAESLEKLQNLDFLI-- 205 + ++ HG + + G+R + + ++ + + Q LD LI Sbjct: 156 LIYDEDGLKVSAFRVDHGAVEHAYGYRIDSDRHSVLISGDTTYSENLIANSQELDLLIHE 215 Query: 206 IDALKNGLHSS----------HFSLSESLKKIELINPKNAILTHM 240 + ++ L S H SL + K +E + P+ +L H+ Sbjct: 216 VSVIEPKLLQSNPKLKSISKYHTSLQQLHKLVEKVKPQKTVLNHL 260 >gi|156844681|ref|XP_001645402.1| hypothetical protein Kpol_534p23 [Vanderwaltozyma polyspora DSM 70294] gi|156116064|gb|EDO17544.1| hypothetical protein Kpol_534p23 [Vanderwaltozyma polyspora DSM 70294] Length = 496 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S+ + I D P+ Q + +L++ Y + ++ +DGLR LK K Sbjct: 82 ISKPKESNKFIEDLAPEHQRQKFNQMPIGLLNMGNTCYMNSTLQALYRVDGLRDMVLKYK 141 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 +V + L + CF+ L ++Y ++ P+V N Sbjct: 142 EQANVQPGDELHYKLISELKRCFENLQKKSYESVM-PVVFLN 182 >gi|257865292|ref|ZP_05644945.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257874892|ref|ZP_05654545.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257799226|gb|EEV28278.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257809058|gb|EEV37878.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 267 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 54 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANTKTWQAMDPMIGNVAVEQKHIFE 107 >gi|198274590|ref|ZP_03207122.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] gi|198272037|gb|EDY96306.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] Length = 268 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 13/75 (17%) Query: 53 NTTVIVDTGPDFYM--QVLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T ++VD G +V +E++L+ I AVL TH HADHI + L +K I Sbjct: 23 STAILVDAGIGIRTIKKVFKERMLNLEEIQAVLVTHDHADHIKAVG-----HLGEKHGIP 77 Query: 108 VYAAPDC---MKHLF 119 VY P+ MKH + Sbjct: 78 VYTTPEIHEGMKHSY 92 >gi|262045520|ref|ZP_06018542.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037213|gb|EEW38462.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 256 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 53 NTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDV 108 N ++D GP + + +V IDA+ +TH H DH G+ L ++ +++P+ + Sbjct: 28 NKQWLIDCGPTVPRALWQRGGEVNDIDAIYFTHVHPDHCTGLTALLNHWKSYSRQKPVII 87 Query: 109 YAAP 112 Y P Sbjct: 88 YCQP 91 >gi|169334734|ref|ZP_02861927.1| hypothetical protein ANASTE_01140 [Anaerofustis stercorihominis DSM 17244] gi|169257472|gb|EDS71438.1| hypothetical protein ANASTE_01140 [Anaerofustis stercorihominis DSM 17244] Length = 298 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 56 VIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++DTG + +L + + ID V+ THPH+DHI G+ G+ F Sbjct: 71 ILIDTGDTEHKDILVSHLKKRGIKKIDYVILTHPHSDHIGGMTGVLDNF 119 >gi|163847834|ref|YP_001635878.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525703|ref|YP_002570174.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669123|gb|ABY35489.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449582|gb|ACM53848.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 439 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%) Query: 55 TVIVDTGPD--FYMQVLREQVLS-IDAVLYTHPHADHIHGI 92 T ++D G D + LREQ +S ID ++ +HPHADHI G+ Sbjct: 148 TALIDGGYDNGLALAYLREQGISQIDVMVASHPHADHIGGL 188 >gi|253699062|ref|YP_003020251.1| ribonuclease Z [Geobacter sp. M21] gi|251773912|gb|ACT16493.1| metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Geobacter sp. M21] Length = 361 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V R + ++ D G M L ++V SIDA+ +H H DH G+D + + R Sbjct: 24 VRVRPTGRALLFDCGK---MHHLAKRVYTSIDAIFISHAHMDHFMGMDSVIRHSHASPRT 80 Query: 106 IDVYAAP---DCMKHLFESFRY 124 ID++ P D M H F + + Sbjct: 81 IDIFGPPGLADRMGHKFSCYDW 102 >gi|121604583|ref|YP_981912.1| hydroxyacylglutathione hydrolase [Polaromonas naphthalenivorans CJ2] gi|120593552|gb|ABM36991.1| Hydroxyacylglutathione hydrolase [Polaromonas naphthalenivorans CJ2] Length = 256 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 55 TVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++VD G + ++ L + L ++++L TH HADH G+D LR Sbjct: 23 ALVVDPGDAEPVLRALEQSALQLESILVTHHHADHTGGVDALR 65 >gi|257871620|ref|ZP_05651273.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257805784|gb|EEV34606.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 268 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 19/59 (32%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA------APDCM--------KHLFE 120 +DA+L TH H DHIHG+ L +K +DVYA A D M KH+FE Sbjct: 55 LDAILVTHEHRDHIHGVG-----VLARKYKLDVYANTKTWQAMDPMIGNVAVEQKHIFE 108 >gi|255513710|gb|EET89975.1| ribonuclease Z [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 300 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%) Query: 21 ITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDA 78 I G G+ P R+ SS+ +SR T + D G Q+LR + + A Sbjct: 6 ILGSSGSA----PTKDRSLSSIAVSR-----EGTIYLFDCGEGTQRQMLRYGLNISRVKA 56 Query: 79 VLYTHPHADHIHGIDGL-RGYFL-KQKRPIDVY 109 + TH H DH+ GI GL R L K+ P+ ++ Sbjct: 57 IFITHMHGDHVIGIAGLVRTLSLYKRSEPLSIF 89 >gi|255527895|ref|ZP_05394740.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|296184662|ref|ZP_06853073.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|255508422|gb|EET84817.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|296050444|gb|EFG89867.1| ribonuclease Z [Clostridium carboxidivorans P7] Length = 307 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 19/87 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG ++ P NR S L +S +G + G M++ Sbjct: 6 LLGCGGNVPTP---------------NRNLTSLL----ISYKGKKILIDCGEGTQVSMKI 46 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGL 95 L I + +TH HADH+ G+ GL Sbjct: 47 LGWGFKDISVICFTHYHADHVIGLPGL 73 >gi|168213779|ref|ZP_02639404.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170714739|gb|EDT26921.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 291 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 22/192 (11%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D + + +ID + THPH DHI G+D + F + + Sbjct: 61 MLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DVKSFY 115 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 AP H +++ KA+ + + E + + + V P+ Q+ Sbjct: 116 APKVA-HTTKTYENMLKAVKNEGLKI---KQIKEGTKIDLGKDTEVQVYS--PVKSQYEE 169 Query: 171 ISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 +++ + +G ++ +A E L L D LK G H SH S SE Sbjct: 170 LNNYSPVMKISYGQNSFMFTGDAESLVEKEILNENKDLKADVLKLGHHGSHSSTSEEF-- 227 Query: 227 IELINPKNAILT 238 ++ ++P AI++ Sbjct: 228 LKAVDPSIAIVS 239 >gi|110798930|ref|YP_696186.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|168210087|ref|ZP_02635712.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|168216885|ref|ZP_02642510.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|110673577|gb|ABG82564.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|170711865|gb|EDT24047.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|182381073|gb|EDT78552.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 291 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 22/192 (11%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D + + +ID + THPH DHI G+D + F + + Sbjct: 61 MLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DVKSFY 115 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 AP H +++ KA+ + + E + + + V P+ Q+ Sbjct: 116 APKVA-HTTKTYENMLKAVKNEGLKI---KQIKEGTKIDLGKDTEVQVYS--PVKSQYEE 169 Query: 171 ISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 +++ + +G ++ +A E L L D LK G H SH S SE Sbjct: 170 LNNYSPVMKISYGQNSFMFTGDAESLVEKEILNENKDLKADVLKLGHHGSHSSTSEEF-- 227 Query: 227 IELINPKNAILT 238 ++ ++P AI++ Sbjct: 228 LKAVDPSIAIVS 239 >gi|118466139|ref|YP_879734.1| metallo-beta-lactamase family protein [Mycobacterium avium 104] gi|118167426|gb|ABK68323.1| metallo-beta-lactamase family protein [Mycobacterium avium 104] Length = 267 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGL 95 GS+ VIVD GPD + R L I VL +H H DH GID L Sbjct: 48 GSDELVIVDPGPDDDEHIARIAALGRIALVLISHRHGDHTDGIDKL 93 >gi|251792199|ref|YP_003006919.1| hydroxyacylglutathione hydrolase [Aggregatibacter aphrophilus NJ8700] gi|247533586|gb|ACS96832.1| hydroxyacylglutathione hydrolase [Aggregatibacter aphrophilus NJ8700] Length = 233 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDC 114 D +L EQ S++A+L TH HADH G+ KQ+ P + +Y +C Sbjct: 32 DKLFHLLEEQHFSVEALLLTHNHADHTDGVAA-----FKQRFPQVPIYGPAEC 79 >gi|29841459|gb|AAP06491.1| SJCHGC05735 protein [Schistosoma japonicum] gi|226468550|emb|CAX69952.1| hydroxyacylglutathione hydrolase [Schistosoma japonicum] gi|226484694|emb|CAX74256.1| hydroxyacylglutathione hydrolase [Schistosoma japonicum] Length = 261 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 47 VSERGSNTTVIVD-TGPDFYMQVLREQVLSIDAVLYTHPHADHIHG-IDGLRGYFLKQKR 104 V +R SN +VD PD + V++++ L + +VL TH H+DH G +D + + Sbjct: 17 VIDRASNICAVVDPVEPDKVLSVVKQRGLQLKSVLTTHHHSDHAGGNLDLIAKCKEQGLE 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFK 127 + VY D + L + + +K Sbjct: 77 ALSVYGGDDRIGGLTVTVSHGYK 99 >gi|148654755|ref|YP_001274960.1| beta-lactamase domain-containing protein [Roseiflexus sp. RS-1] gi|148566865|gb|ABQ89010.1| beta-lactamase domain protein [Roseiflexus sp. RS-1] Length = 254 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 + + V++D G Y ++LR V D A++ TH HADH++G+ GL Sbjct: 25 KAPDGAVLIDAGGSTYQRLLRAGVNPHDLRALILTHSHADHVNGLPGL 72 >gi|281491008|ref|YP_003352988.1| metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis KF147] gi|281374766|gb|ADA64286.1| Metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis KF147] Length = 210 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 52 SNTT--VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF 99 SN+T +I+D G D + R ++ +I A+L TH H DHI G++ LR +F Sbjct: 19 SNSTSHLIIDPGSDSSALLERLKITDKTISAILLTHAHFDHIMGLNELRKHF 70 >gi|257068897|ref|YP_003155152.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810] gi|256559715|gb|ACU85562.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810] Length = 787 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Query: 56 VIVDTGPD--FYMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 V++DTGPD Q L R Q+ ID ++ THPH DH G R ++ P + P Sbjct: 556 VLLDTGPDPEALRQCLDRLQIPRIDLLVLTHPHQDHTGG----RAALTGRRAPAQQWVCP 611 >gi|291167123|gb|EFE29169.1| LytTr family DNA-binding response regulator [Filifactor alocis ATCC 35896] Length = 243 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 NT+V+ +G D + + D +L + GID +R K+ + I V Sbjct: 30 ENTSVVFASGEDLLADFKQGKY---DLILMDIYMESELTGIDTIR-LIRKKDKDIPVAFV 85 Query: 112 PDCMKHLFESFR-----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 H ES+R Y K + I++ V++ NDVP G++E +P+ Sbjct: 86 TTSKDHALESYRLSAMKYIEKPYSKESIEDILHLAVLKKNDVPTLFVQRNGIVERVPL 143 >gi|218883849|ref|YP_002428231.1| beta-lactamase domain protein [Desulfurococcus kamchatkensis 1221n] gi|218765465|gb|ACL10864.1| beta-lactamase domain protein [Desulfurococcus kamchatkensis 1221n] Length = 249 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 30/182 (16%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AV THPH DH G+ GL + +K + + + +H+ K + + Sbjct: 52 IKVKAVFVTHPHGDHYLGLFGLLQTMGLMDRKEALKLVVPKEVEEHI--------KVVVE 103 Query: 132 RTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--FGNVAYCTD 186 + V P+ VI + +V + +EA P+ QHG + + GFR G + C Sbjct: 104 KKLMRTVFPLELTVITSGEV---YRDEKISVEAYPV--QHG-VEAYGFRVGIGKKSLCYT 157 Query: 187 VNAFPAESL-EKLQNLDFLIIDA-----LKNGLHSSHFSLSE--SLKKIELINPKNAILT 238 + P ++ E + +D LI ++ + + H + S S+ +L IE + +LT Sbjct: 158 GDTMPCNTIVENCKGVDVLIHESTFTSEMSSEAHEEYHSTSKDAALTAIE-AGVASLVLT 216 Query: 239 HM 240 H+ Sbjct: 217 HI 218 >gi|91203527|emb|CAJ71180.1| similar to hydroxyacylglutathione hydrolase (glyoxalase II) [Candidatus Kuenenia stuttgartiensis] Length = 210 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Query: 47 VSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + R NT ++D G + +++L++Q L++ ++ TH H DH+ G+ L Sbjct: 23 IGSRSDNTAAVIDAGGNVKEIVEILKKQNLTLKYIINTHAHFDHVGGVSELH 74 >gi|330900483|gb|EGH31902.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 185 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 79/215 (36%), Gaps = 46/215 (21%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + VP AC + RR S I +R ++D+G Sbjct: 3 LTLLGTGDARQVPVYGCQCVACAAARADHDLRRLPCSALIECADQR-----WLIDSG--- 54 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKH-L 118 + L E+ S+ +L TH HADH G+ LR G + P D D KH Sbjct: 55 -LTDLTERFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL---- 174 F F A + R + + A+P++ L Sbjct: 114 ILDFSQPFAAFERRALGAL--------------------QVTALPLVHSKPTFGYLFEGD 153 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIID 207 G RF AY TD P ++ E LQ LD L++D Sbjct: 154 GQRF---AYLTDTVGLPGDTREYLQRAPLDLLVLD 185 >gi|325262049|ref|ZP_08128787.1| metallo-beta-lactamase family protein [Clostridium sp. D5] gi|324033503|gb|EGB94780.1| metallo-beta-lactamase family protein [Clostridium sp. D5] Length = 206 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 5/42 (11%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++ Q L++ A+L TH H DHI GIDG FLK+ + + VYA Sbjct: 42 IKSQGLALKAILLTHGHFDHIMGIDG----FLKEFQ-VPVYA 78 >gi|325662330|ref|ZP_08150939.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086133|ref|ZP_08335215.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471332|gb|EGC74555.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406292|gb|EGG85806.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 207 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 11/58 (18%) Query: 56 VIVDTGPDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 VIVD P Y + LRE+ L AVL TH H DHI G+D L ++ P+ VY Sbjct: 27 VIVD--PAAYSKKLAEFLREEGLKPQAVLLTHGHFDHIMGLDALL-----EEYPVPVY 77 >gi|304437038|ref|ZP_07397001.1| beta-lactamase domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369989|gb|EFM23651.1| beta-lactamase domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 304 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGL 95 + V++DTG LR + V +DAV+ THPHADHI G++ L Sbjct: 59 AEQNVLIDTGDVDERDKLRAELDKAGVKKLDAVILTHPHADHIGGMEML 107 >gi|152967377|ref|YP_001363161.1| DNA internalization-related competence protein ComEC/Rec2 [Kineococcus radiotolerans SRS30216] gi|151361894|gb|ABS04897.1| DNA internalization-related competence protein ComEC/Rec2 [Kineococcus radiotolerans SRS30216] Length = 800 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDG-LRG 97 G V+VD GPD + + R + +DAV+ TH HADH+ G+ G LRG Sbjct: 550 GPTAGVLVDAGPDDVLVDGCLDRLGLDRLDAVVLTHFHADHVGGLAGALRG 600 >gi|15614276|ref|NP_242579.1| hypothetical protein BH1713 [Bacillus halodurans C-125] gi|41017582|sp|Q9KC61|RNZ_BACHD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|10174330|dbj|BAB05432.1| BH1713 [Bacillus halodurans C-125] Length = 309 Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 23/119 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F G G+ GVP I + AC + + +RG + D G Sbjct: 3 FHFFGTGS--GVPSIERNVSAC--------------AVRFLQQRGKQW--LFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 Q+LR + I+ + TH H DHI G+ GL G F + P+ +Y P ++ E+ Sbjct: 45 QILRSSIALGKIERIFITHLHGDHIFGLPGLLGSRSFQGGENPLFLY-GPKGIRSFVET 102 >gi|261856166|ref|YP_003263449.1| hydroxyacylglutathione hydrolase [Halothiobacillus neapolitanus c2] gi|261836635|gb|ACX96402.1| hydroxyacylglutathione hydrolase [Halothiobacillus neapolitanus c2] Length = 266 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 L++ A+L TH HADH G+ GLR F P+ VY Sbjct: 44 LTLKAILLTHHHADHCQGVAGLRARF-----PVPVYG 75 >gi|330861992|emb|CBX72160.1| protein phnP [Yersinia enterocolitica W22703] Length = 206 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 79/211 (37%), Gaps = 41/211 (19%) Query: 75 SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALD 130 I L TH H DH+ G+ LR G + P D D KH +F+ A Sbjct: 17 EIQRFLLTHYHMDHVQGLFPLRWGCGNAIPVYGPPDPDGCDDLYKHPGILAFQPPLSAF- 75 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 +PI G + P+ H +I+ G+ + +AY TD Sbjct: 76 --------HPIQF-------------GDLRVTPVPLNHSKIT-FGYLLQSPNRTIAYLTD 113 Query: 187 VNAFPAESLEKL--QNLDFLIIDALKNGLHSS--------HFSLSESLKKIELINPKNAI 236 PA+S L +N+D LI D H S H ++ +L EL+ P + Sbjct: 114 TIGLPADSALFLASKNIDLLIQDCSHPPHHFSPHRPPPRNHNDVTMALAISELLKPAATL 173 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 LTH+ LD + + P + A D S Sbjct: 174 LTHISHQLDTWALDNTLPDGITIAQDNQIIS 204 >gi|49082232|gb|AAT50516.1| PA1012 [synthetic construct] Length = 253 Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T ++VD G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILVDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|227828486|ref|YP_002830266.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|229585716|ref|YP_002844218.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238620680|ref|YP_002915506.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|227460282|gb|ACP38968.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] gi|228020766|gb|ACP56173.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238381750|gb|ACR42838.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] Length = 209 Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query: 56 VIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V++D G D +Q +R++ ++I ++ TH H DHI G++ L+ F Sbjct: 25 VVIDAGGDMSELIQAVRKEKITIRYIIATHGHFDHIMGVNQLKREF 70 >gi|324994825|gb|EGC26738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK678] gi|325687266|gb|EGD29288.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK72] Length = 266 Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANESTWKAM 90 >gi|182701975|ref|ZP_02618967.2| ribonuclease Z [Clostridium botulinum Bf] gi|237794728|ref|YP_002862280.1| ribonuclease Z [Clostridium botulinum Ba4 str. 657] gi|182672598|gb|EDT84559.1| ribonuclease Z [Clostridium botulinum Bf] gi|229261555|gb|ACQ52588.1| ribonuclease Z [Clostridium botulinum Ba4 str. 657] Length = 346 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 19/90 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 + +LGCG + +P R SSL ++ RG + G Sbjct: 3 NLALLGCGGGMPIPD----------------RFLSSLLMNY---RGRKILIDCGEGTQVS 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 M++L SID + TH H DH+ G+ GL Sbjct: 44 MKILGWGFKSIDIICITHMHGDHVVGLPGL 73 >gi|221067920|ref|ZP_03544025.1| hydroxyacylglutathione hydrolase [Comamonas testosteroni KF-1] gi|220712943|gb|EED68311.1| hydroxyacylglutathione hydrolase [Comamonas testosteroni KF-1] Length = 257 Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 55 TVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 V+VD G + + L ++ L + +L TH HADH+ GID +R Sbjct: 23 AVVVDPGQAEPVLSTLAQRGLKLQGILVTHHHADHVGGIDAIRA 66 >gi|302386266|ref|YP_003822088.1| ribonuclease Z [Clostridium saccharolyticum WM1] gi|302196894|gb|ADL04465.1| ribonuclease Z [Clostridium saccharolyticum WM1] Length = 265 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 40/174 (22%) Query: 51 GSNTT-VIVDTG--PDFYMQVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 GS+TT ++VD G Q L E L + ++ TH H+DH G+ L +K Sbjct: 18 GSDTTHILVDAGISNKRIQQGLNEIGLKGSELTGIVITHEHSDHTKGLG-----VLARKY 72 Query: 105 PIDVYAAPDCM------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + +Y + + K+L E R F A V+P DV C+ G Sbjct: 73 GVPIYGTRETLDEISKQKYLGEYPRELFHA---------VSP------DVDFCV----GD 113 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 +E P H + + +R +VA TD+ + +E LQ LD L++++ Sbjct: 114 LEVKPFSIDHDASNPVAYRIQHGHKSVAVATDMGHYDQYIIEHLQGLDALLLES 167 >gi|229524234|ref|ZP_04413639.1| arylsulfatase [Vibrio cholerae bv. albensis VL426] gi|229337815|gb|EEO02832.1| arylsulfatase [Vibrio cholerae bv. albensis VL426] Length = 316 Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 43/242 (17%) Query: 53 NTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDV 108 + V++D G +++ + + +D + TH H DH+ + L GYF K++ P+D+ Sbjct: 60 KSRVMIDAGGGSFLRFGQSGSTLEDLDFLGITHFHTDHVADLPALLKGGYFFKREDPLDI 119 Query: 109 YAAPDC----------MKHLFESFRYCFKALD------DRTYPPIVNPIVIENNDVPICM 152 A P M LF S + L+ D +P + + + Sbjct: 120 -AGPQAGSAFPSLTGYMDALFNSKDGAYAYLNGLYDGSDGLFPVTITDVPYKTTTPIKVY 178 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII-- 206 + G I A+ I HG + L +R G + D N + Q+ D L++ Sbjct: 179 QQDGLTIYALGI--PHGDVPCLAYRIESDQGVIVISADQNGSNPAFYDFAQDADILVMPM 236 Query: 207 ------DALKNGLHSSHFSLSESLKKIELINPKNAILTH-MHVDLDYDMVLKSTPSRVVP 259 D + +H+ + E K INPK +L H M V L + K+ ++++ Sbjct: 237 AIHESADDVSAFMHAKPSVIGEIAAK---INPKLLVLNHWMGVGLKH----KAESTKIIK 289 Query: 260 AF 261 F Sbjct: 290 QF 291 >gi|160893542|ref|ZP_02074326.1| hypothetical protein CLOL250_01096 [Clostridium sp. L2-50] gi|156864527|gb|EDO57958.1| hypothetical protein CLOL250_01096 [Clostridium sp. L2-50] Length = 302 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS---IDAVLYTHPHADHIHGIDGL 95 R + ++++VD G + V ++Q S ID +L+TH HADHI G+ GL Sbjct: 26 RYNGSSILVDCGEGTQVAV-KQQGWSFKPIDVILFTHFHADHISGLPGL 73 >gi|88813346|ref|ZP_01128584.1| Metallo-beta-lactamase superfamily protein [Nitrococcus mobilis Nb-231] gi|88789404|gb|EAR20533.1| Metallo-beta-lactamase superfamily protein [Nitrococcus mobilis Nb-231] Length = 257 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%) Query: 57 IVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +VD G PD ++ L+++ L + +L TH HADH+ GI L ++ P+ VY Sbjct: 29 VVDPGDPDPVLRFLKQEKLELTGILATHHHADHVGGI-----ARLVKEHPVPVYG 78 >gi|297160556|gb|ADI10268.1| integral membrane protein [Streptomyces bingchenggensis BCW-1] Length = 722 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDG-LRG 97 G V+VDTGP+ + LR V+ I ++ TH HADH+ G+ G LRG Sbjct: 483 GPGAAVVVDTGPEPRAVDRCLRRLGVVRIPLLVLTHFHADHVAGLSGALRG 533 >gi|83643721|ref|YP_432156.1| beta-lactamase superfamily hydrolase [Hahella chejuensis KCTC 2396] gi|83631764|gb|ABC27731.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Hahella chejuensis KCTC 2396] Length = 251 Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 46/214 (21%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-- 103 + ++ ++++D G P + L + +ID VL TH HADH G+ L +L++K Sbjct: 24 QSADGSILIDCGYQVPPRLWAGDLHQ---NIDLVLLTHHHADHSFGVVPLLVRYLEEKRT 80 Query: 104 RPIDVY---AAPDCMKHLFES--------FRYC-----FKALDDRTYPPIVNPIVIENND 147 RP+ ++ +K L E F+Y F LD + Y D Sbjct: 81 RPLKIWGPAGTETFIKSLLEHGYPGVSKYFKYTIEFAEFDTLDSKQY-----------GD 129 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 V I + +IP L + L F + + D P E++E +Q +D + + Sbjct: 130 VSI---RCAPTVHSIPNL-----LYRLDFNGRSFSISGDGKLTP-EAVELIQGVDLHLQE 180 Query: 208 ALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 + N SH+S SE L+ + + +THM Sbjct: 181 VYELNDNIPSHYSFSEVLQFAQSGGAASVGVTHM 214 >gi|19113935|ref|NP_593023.1| tRNA endonuclease Trz2 (predicted) [Schizosaccharomyces pombe 972h-] gi|1723232|sp|Q10155|RNZ1_SCHPO RecName: Full=Probable ribonuclease Z 1; Short=RNase Z 1; AltName: Full=tRNA 3 endonuclease 1; AltName: Full=tRNase Z 1 gi|1177343|emb|CAA93219.1| tRNA endonuclease Trz2 (predicted) [Schizosaccharomyces pombe] Length = 809 Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 53/236 (22%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ---KRPIDVYAAPDCMKHLFES 121 Y L+ ++ S+ + +H HADH G+ G+ + K + + + A P FE Sbjct: 556 YGDNLKYEIASLRWIYISHMHADHHAGVIGVLKAWTKYSDGRSKLFITAPPQ-----FEF 610 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + + +D Y P+ N + I N+ + K P + R+SSL F V Sbjct: 611 WLLEYSRID---YLPLSNIVFISNSALRTDRK---------PSALESSRLSSLFKEFDLV 658 Query: 182 ------------AYCTDV------------NAFPAESLEKLQNLDFLIID--ALKNGLHS 215 +YC ++ + P+E + L+I L++ +H Sbjct: 659 SFRTVPAIHCPYSYCMEITNSSGWKIAYSGDTRPSEDFANIAKDSTLLIHEATLEDSMHE 718 Query: 216 -----SHFSLSESLKKIELINPKNAILTHMHVDLDY--DMVLKSTPSRVVPAFDGM 264 H + SE+L+ + KN ILTH D+ + + + AFDGM Sbjct: 719 IAIKKQHSTYSEALEVAKKAGTKNVILTHFSQRYPKLPDIDISTEDLHIALAFDGM 774 >gi|328946753|gb|EGG40891.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1087] Length = 266 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEATWKAM 90 >gi|324993854|gb|EGC25773.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK405] Length = 266 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEATWKAM 90 >gi|323475568|gb|ADX86174.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A] gi|323478280|gb|ADX83518.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4] Length = 209 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query: 56 VIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V++D G D +Q +R++ ++I ++ TH H DHI G++ L+ F Sbjct: 25 VVIDAGGDMSELIQAVRKEKITIRYIIATHGHFDHIMGVNQLKREF 70 >gi|312876068|ref|ZP_07736057.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797266|gb|EFR13606.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 295 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 N V++D+GP D + R V +D V+ THPH DHI +D + Sbjct: 66 NKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|55377930|ref|YP_135780.1| hypothetical protein rrnAC1117 [Haloarcula marismortui ATCC 43049] gi|55230655|gb|AAV46074.1| unknown [Haloarcula marismortui ATCC 43049] Length = 191 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 55 TVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 TV+VD G +F + + E V IDAV TH H DH+ +D + F Sbjct: 24 TVLVDVGNEFDVVSTVEEHVDDIDAVAVTHTHYDHVENLDSVVDAF 69 >gi|322368278|ref|ZP_08042847.1| ATP-binding protein [Haladaptatus paucihalophilus DX253] gi|320552294|gb|EFW93939.1| ATP-binding protein [Haladaptatus paucihalophilus DX253] Length = 272 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 31/185 (16%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 R+R S+ V ++ ++++D PDF Q L V D VL TH H DH+ G+ Sbjct: 33 ERSRFSV---HVRNEETDESLLIDASPDFRSQFLDNDVSLPDEVLITHIHFDHLDGLGN- 88 Query: 96 RGYFLKQKRPIDVY--AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 Y L P+ P + + ++ R F LD T + P+ Sbjct: 89 -AYRLFDSLPVHATDETDPKTGESVADAIRNKFDYLDRITV----------HGHAPLASF 137 Query: 154 SAGGV------IEAIPILQQHGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFL 204 SA G +E P++ + G + G+ Y + P S E L + D Sbjct: 138 SACGFDVTFVPVEHPPLVCYGVVVEKDGSKLALTGDTGY-----SIPDASREALSDADLF 192 Query: 205 IIDAL 209 + DA+ Sbjct: 193 LADAI 197 >gi|312130193|ref|YP_003997533.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] gi|311906739|gb|ADQ17180.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] Length = 209 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 8/54 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQV------LSIDAVLYTHPHADHIHGIDGLRGYF 99 S T++VD P Y Q +EQ+ L++ A+L TH H DHI G+ L+ ++ Sbjct: 21 SGETIVVD--PGCYTQAEKEQLKEFLKPLNVKAILLTHAHLDHIFGVAYLKRHY 72 >gi|195472913|ref|XP_002088742.1| GE11184 [Drosophila yakuba] gi|194174843|gb|EDW88454.1| GE11184 [Drosophila yakuba] Length = 292 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 20/89 (22%) Query: 35 NRRTRSSLKI-----SRVSERGSNT--------TVIVDTGP-------DFYMQVLREQVL 74 R T S ++I S ++ +G+NT +++DTG D +VL+++ Sbjct: 8 TRLTSSVIRILGCNPSPMTLQGTNTYLLGSGRRRILIDTGDEDVPQYIDHLGEVLQQEEA 67 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +ID +L TH H DH+ G+ + G L K Sbjct: 68 AIDTILLTHWHHDHVGGVKSILGTKLADK 96 >gi|309791804|ref|ZP_07686291.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308226126|gb|EFO79867.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 358 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%) Query: 55 TVIVDTGPD--FYMQVLREQVLS-IDAVLYTHPHADHIHGI 92 TV++D GP + L+ Q ++ ID ++ THPHADHI G+ Sbjct: 103 TVLIDGGPQNGLALAYLQGQGITHIDTLIATHPHADHIGGL 143 >gi|331701139|ref|YP_004398098.1| ribonuclease Z [Lactobacillus buchneri NRRL B-30929] gi|329128482|gb|AEB73035.1| Ribonuclease Z [Lactobacillus buchneri NRRL B-30929] Length = 312 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P R SSL + + E N+ + D G Q+LR + I+ + +H H DHI Sbjct: 12 SPGKFRNVSSLALRLLDE--INSVWLFDVGEGTQHQILRSTIRPRKIEKIFISHLHGDHI 69 Query: 90 HGIDGLRG--YFLKQKRPIDVYAAPDCMK 116 G+ GL F P+D+Y P +K Sbjct: 70 FGLPGLLSSRSFQGGNTPLDIY-GPKGIK 97 >gi|182418097|ref|ZP_02949400.1| metallo-beta-lactamase superfamily exported protein [Clostridium butyricum 5521] gi|237667168|ref|ZP_04527152.1| metallo-beta-lactamase superfamily exported protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378066|gb|EDT75603.1| metallo-beta-lactamase superfamily exported protein [Clostridium butyricum 5521] gi|237655516|gb|EEP53072.1| metallo-beta-lactamase superfamily exported protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 293 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 30/196 (15%) Query: 55 TVIVDTG----PDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++DTG D + L+E+ + SID ++ TH DHI G D + F +D Sbjct: 73 NIMIDTGLNSTKDNVVSQLKEKNIDSIDYLILTHMDKDHIGGADAILNEF-----KVDNV 127 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-- 167 D K + +Y KA++ +NPI+I +N I +K+ I P L++ Sbjct: 128 IQADYSKDSKQYDQY-IKAIEKNN----INPILIHDN---INVKTDNAEINIYPALKKSY 179 Query: 168 -----HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + I S+ + N + D E L + N + +K H SLSE Sbjct: 180 SQSNDYSIIVSINYGKYNFLFAGDA---EEERLAEFINSNNEKYTLVKMPHHGKINSLSE 236 Query: 223 SLKKIELINPKNAILT 238 K I+ INP +I+T Sbjct: 237 --KFIKSINPSYSIIT 250 >gi|159040998|ref|YP_001540250.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis IC-167] gi|157919833|gb|ABW01260.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167] Length = 237 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 19/103 (18%) Query: 56 VIVDTGPDFYMQVLREQVL---SIDAVLYTHPHADHIHGI------DGLRGYFLKQKRPI 106 +++D G Y Q+ R L SIDAV+ TH H DHI G+ G RG L P Sbjct: 18 LLLDAGEGSYRQLRRCTGLDVDSIDAVIVTHGHGDHILGLPSYVLMAGSRGIRLSVIAP- 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 +++ + KA + Y +NPI ++ + P Sbjct: 77 ---------RYVMDDLVSLIKATHIQQYVNALNPIPVDTPNEP 110 >gi|315221422|ref|ZP_07863343.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] gi|315189541|gb|EFU23235.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] Length = 267 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 43/112 (38%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ TG FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------------MKHLFE 120 H H DHIHG+ L +K +D+YA + KH+FE Sbjct: 61 HEHKDHIHGVG-----VLARKYHLDIYANQETWNAMEVALGKIDVSQKHIFE 107 >gi|55821167|ref|YP_139609.1| hypothetical protein stu1158 [Streptococcus thermophilus LMG 18311] gi|55737152|gb|AAV60794.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 276 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 29/91 (31%) Query: 44 ISRVSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAV 79 + SE G +++ TG FY++ +++L +DA+ Sbjct: 5 VEMTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAI 64 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 L TH H DHIHG+ L +K +D+YA Sbjct: 65 LVTHEHKDHIHGVG-----VLARKYGMDIYA 90 >gi|255952520|ref|XP_002567013.1| Pc17g00570 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586516|emb|CAP79344.1| Pc17g00570 [Penicillium chrysogenum Wisconsin 54-1255] Length = 532 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 18/123 (14%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN----AFPAE 193 +N IE +D +C+ + G +E + L +H +I DVN F Sbjct: 393 INESTIETHDTALCIAARNGELEMVQALLRHDQI--------------DVNLRNRWFEDP 438 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + +++ F I+D L HFSL SL + AI T M D +LK + Sbjct: 439 LMLAVKSGHFSIVDTLVVNPRLKHFSLKRSLDLARDDCIQRAIRTRMEDDNSRQGLLKRS 498 Query: 254 PSR 256 P R Sbjct: 499 PRR 501 >gi|23005928|ref|ZP_00048499.1| COG0491: Zn-dependent hydrolases, including glyoxylases [Magnetospirillum magnetotacticum MS-1] Length = 129 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 GS++ V+VD GPD ++ L ++ VL TH HADH G GLR Sbjct: 36 GSSSCVVVDPGPDDGAHLDAL-AAAGPVELVLVTHRHADHTAGSPGLR 82 >gi|312127702|ref|YP_003992576.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777721|gb|ADQ07207.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 295 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 N V++D+GP D + R V +D V+ THPH DHI +D + Sbjct: 65 ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|152984190|ref|YP_001349737.1| hypothetical protein PSPA7_4385 [Pseudomonas aeruginosa PA7] gi|150959348|gb|ABR81373.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 236 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL-----SIDAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L +DA+L TH HADHIHG++ L ++ Sbjct: 4 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 56 >gi|18310481|ref|NP_562415.1| late competence protein [Clostridium perfringens str. 13] gi|18145161|dbj|BAB81205.1| probable late competence protein [Clostridium perfringens str. 13] Length = 291 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 28/195 (14%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G D + + +ID + THPH DHI G+D + F + + Sbjct: 61 MLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DVKSFY 115 Query: 111 APDCMKHLFESFRYCFKALDDR--TYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQ 167 AP H +++ KA+ + I I+ D + + S P+ Q Sbjct: 116 APKVA-HTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTDVQVYS--------PVKSQ 166 Query: 168 HGRISS----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 + +++ + +G ++ +A E L L D LK G H SH S SE Sbjct: 167 YEELNNYSPVMKISYGQNSFMFTGDAESLVEKEILNENKDLKADVLKLGHHGSHSSTSEE 226 Query: 224 LKKIELINPKNAILT 238 ++ ++P AI++ Sbjct: 227 F--LKAVDPSIAIVS 239 >gi|298674167|ref|YP_003725917.1| ribonuclease Z [Methanohalobium evestigatum Z-7303] gi|298287155|gb|ADI73121.1| ribonuclease Z [Methanohalobium evestigatum Z-7303] Length = 304 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 11/132 (8%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIH 90 P R S+ I + SE ++ D G Q++R + ++S+ ++ TH HADH+ Sbjct: 14 PTPYRNPPSILIKKDSE-----LLMFDCGEGAQQQMMRARTGMMSLSSIFITHFHADHVL 68 Query: 91 GIDGLRGYFLKQKR--PIDVYAAP--DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 GI GL Q R P+ +Y D + + YC + +T I+ +N Sbjct: 69 GIPGLLQTMSFQGRTEPLYIYGPEKIDVFIQILTALGYCQLGYEIKTVELKPGDIIEKNG 128 Query: 147 DVPICMKSAGGV 158 +K+ GV Sbjct: 129 YHIKALKTEHGV 140 >gi|229828400|ref|ZP_04454469.1| hypothetical protein GCWU000342_00461 [Shuttleworthia satelles DSM 14600] gi|229792994|gb|EEP29108.1| hypothetical protein GCWU000342_00461 [Shuttleworthia satelles DSM 14600] Length = 210 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 47 VSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + + G +I+D G + LR++ L + AVL TH HADH GI+ L LK + Sbjct: 18 IHKEGEKEALIIDPGAAGRQLAEHLRKEGLRLAAVLLTHGHADHAGGIEDLL-RELKDRV 76 Query: 105 PIDVYAA 111 P+ Y Sbjct: 77 PVIAYEG 83 >gi|222529226|ref|YP_002573108.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456073|gb|ACM60335.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 295 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 N V++D+GP D + R V +D V+ THPH DHI +D + Sbjct: 65 ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|194759071|ref|XP_001961773.1| GF15132 [Drosophila ananassae] gi|190615470|gb|EDV30994.1| GF15132 [Drosophila ananassae] Length = 292 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%) Query: 53 NTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 N +++DTG + Q VL+++ SID +L TH H DH+ G+ + G L Sbjct: 39 NRRILIDTGDEDVPQYIEHLNDVLKQEKASIDTILLTHWHHDHVGGVKSILGTAL 93 >gi|146343614|ref|YP_001208662.1| bifunctional glyoxylase/rhodanese-like sulfurtransferase [Bradyrhizobium sp. ORS278] gi|146196420|emb|CAL80447.1| Conserved hypothetical protein; putative bifunctional protein: Zn-dependent hydrolase including glyoxylases (N-terminal) and Rhodanese-related sulfurtransferase (C-terminal) [Bradyrhizobium sp. ORS278] Length = 346 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 47 VSERGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++ R VI+D D Y Q+LRE L + + TH HADH+ G+ LR Sbjct: 18 LASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHADHVTGLGALR 70 >gi|302871963|ref|YP_003840599.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574822|gb|ADL42613.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 295 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 N V++D+GP D + R V +D V+ THPH DHI +D + Sbjct: 65 ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|325507777|gb|ADZ19413.1| Metal-dependent hydrolase of the metallobeta-lactamase superfamily [Clostridium acetobutylicum EA 2018] Length = 235 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 30/170 (17%) Query: 48 SERGSNTT--------VIVDTGPDFYMQVLREQVLSIDAVLY---THPHADHIHGIDGL- 95 +ERG+N+ ++VD G + ++ + +L LY TH H DHI + L Sbjct: 13 TERGNNSAFIKKNSSMILVDCGGTVFHRIKQLNLLQDIKNLYIIITHTHPDHIGSLGDLI 72 Query: 96 -RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y++ + +P +Y D + F + D Y ++ +N V + Sbjct: 73 FYCYYILKFKPTIIYPNKDIITDFFNII-----GVGDEMYE------LVSDNKVNLTAPE 121 Query: 155 AGGV-IEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQ 199 G + IE IP G I + GF G V Y D N P + + K++ Sbjct: 122 FGDLNIEFIP-ASHVGVIPAYGFLIGMSDNLVYYSGDGNKLPEKIINKIK 170 >gi|257465086|ref|ZP_05629457.1| glyoxalase II family protein [Actinobacillus minor 202] gi|257450746|gb|EEV24789.1| glyoxalase II family protein [Actinobacillus minor 202] Length = 209 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + I+D G + +Q + +Q L+++ +L TH H DHI ++ +R +F + VY Sbjct: 23 NKNAAIIDAGDNAERIIQFVEQQELNVEKLLITHAHLDHIMAVESVRDHF-----GVPVY 77 Query: 110 AAPDCMKHLFESF-RYCFK 127 + K LFE + C K Sbjct: 78 GSHLADKPLFEQLPQMCEK 96 >gi|329113552|ref|ZP_08242332.1| Putative protein YcbL [Acetobacter pomorum DM001] gi|326697074|gb|EGE48735.1| Putative protein YcbL [Acetobacter pomorum DM001] Length = 223 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + VIVD G D + L++ +L ++A+L TH H DH G+ L Sbjct: 30 TRKAVIVDAGGDANVLLDFLKKNILEVEAILLTHGHLDHAGGVAAL 75 >gi|268610450|ref|ZP_06144177.1| ribonuclease Z [Ruminococcus flavefaciens FD-1] Length = 304 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKR 104 V + G + G M + ++ ++A+L TH HADH+ G+ GL + Sbjct: 25 VEQNGKAVLIDCGEGTQVAMGMHGLKMSRVEALLITHDHADHVTGLPGLLLSIGNCSRTE 84 Query: 105 PIDVYAAPDCMKHLFESFRYC 125 P+D+Y C+ + C Sbjct: 85 PLDIYLPESCVNAVKSLMSVC 105 >gi|119513642|ref|ZP_01632649.1| ribonuclease Z [Nodularia spumigena CCY9414] gi|119461707|gb|EAW42737.1| ribonuclease Z [Nodularia spumigena CCY9414] Length = 319 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 23/185 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R ++D G Q+LR ++ + + TH H DHI Sbjct: 13 PTRSRNVSSIAL-RLPQRAE--LWLLDCGEGTQHQLLRSDLKMSQLSRIFITHLHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP-IVIENND 147 G+ GL + +D+Y P +++ + RY +V P I+ E+++ Sbjct: 70 GLMGLLASCGLAGNVQRVDLYGPPGLNEYIQAATRYSHTHFSYPVKVHVVQPGIIYEDDE 129 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + +L H RI++ G+R +A F E + LQ I Sbjct: 130 FTV----------SCSLL--HHRITAFGYR---IAEKDRPGRFDIEKAQALQIPSGPIYG 174 Query: 208 ALKNG 212 LK G Sbjct: 175 KLKRG 179 >gi|55823080|ref|YP_141521.1| hypothetical protein str1158 [Streptococcus thermophilus CNRZ1066] gi|55739065|gb|AAV62706.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 276 Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 29/91 (31%) Query: 44 ISRVSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAV 79 + SE G +++ TG FY++ +++L +DA+ Sbjct: 5 VEMTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAI 64 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 L TH H DHIHG+ L +K +D+YA Sbjct: 65 LVTHEHKDHIHGVG-----VLARKYGMDIYA 90 >gi|15790363|ref|NP_280187.1| FprA [Halobacterium sp. NRC-1] gi|169236097|ref|YP_001689297.1| metallo-beta-lactamase family hydrolase [Halobacterium salinarum R1] gi|12655903|gb|AAK00647.1|AF227235_1 hydroxyacylglutathione hydrolase-like protein [Halobacterium salinarum] gi|10580843|gb|AAG19667.1| flavoprotein [Halobacterium sp. NRC-1] gi|167727163|emb|CAP13949.1| putative metallo-beta-lactamase family hydrolase [Halobacterium salinarum R1] Length = 192 Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Query: 56 VIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G ++ + +R+ ++ DAV+ THPH DH+ +D L F Sbjct: 25 VVVDAGANYDVVAAVRDHGVTPDAVVITHPHPDHVGNLDALVDAF 69 >gi|15596209|ref|NP_249703.1| hypothetical protein PA1012 [Pseudomonas aeruginosa PAO1] gi|116048940|ref|YP_792259.1| hypothetical protein PA14_51250 [Pseudomonas aeruginosa UCBPP-PA14] gi|9946922|gb|AAG04401.1|AE004533_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115584161|gb|ABJ10176.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa UCBPP-PA14] Length = 252 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|107100453|ref|ZP_01364371.1| hypothetical protein PaerPA_01001478 [Pseudomonas aeruginosa PACS2] gi|254245285|ref|ZP_04938607.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126198663|gb|EAZ62726.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 252 Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|319939368|ref|ZP_08013728.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] gi|319811354|gb|EFW07649.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] Length = 267 Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 43/112 (38%) Query: 47 VSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAVLYT 82 +SE+G +++ TG FY++ ++++L +DA+L T Sbjct: 1 MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIDRKPEDLDAILVT 60 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------------MKHLFE 120 H H DHIHG+ L +K +D+YA + KH+FE Sbjct: 61 HEHKDHIHGVG-----VLARKYHLDIYANQETWNAMEVALGKIDVSQKHIFE 107 >gi|323340876|ref|ZP_08081127.1| ribonuclease Z [Lactobacillus ruminis ATCC 25644] gi|323091727|gb|EFZ34348.1| ribonuclease Z [Lactobacillus ruminis ATCC 25644] Length = 313 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P R SSL + + E +N+ + D G Q+LR + +D + TH H DH+ Sbjct: 12 SPSKFRNVSSLVLKLLDE--NNSVWMFDCGEGTQHQILRTTIRPRKVDKIFITHLHGDHL 69 Query: 90 HGIDGL---RGYFL-KQKRPIDVYA 110 G+ G R + ++ RP+ +Y Sbjct: 70 FGLPGFLSSRSFQTGEETRPLTIYG 94 >gi|254239349|ref|ZP_04932672.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126171280|gb|EAZ56791.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 252 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|89094530|ref|ZP_01167469.1| Metallo-beta-lactamase superfamily protein [Oceanospirillum sp. MED92] gi|89081266|gb|EAR60499.1| Metallo-beta-lactamase superfamily protein [Oceanospirillum sp. MED92] Length = 257 Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 SN +VD G + + L E L + A+L TH H DH G++ L+ F K P+ Sbjct: 23 SNMVAVVDPGDEAPVLAYLEENNLQLTAILITHHHNDHTGGVEALKDRF---KTPV 75 >gi|327470649|gb|EGF16105.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK330] Length = 266 Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|327461012|gb|EGF07345.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1057] Length = 266 Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|325690804|gb|EGD32805.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK115] gi|325696127|gb|EGD38018.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK160] Length = 266 Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|324991494|gb|EGC23427.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK353] Length = 266 Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +DA+L TH H DHIHG+ L +K +D+YA K Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWK 88 >gi|328957585|ref|YP_004374971.1| ribonuclease Z [Carnobacterium sp. 17-4] gi|328673909|gb|AEB29955.1| ribonuclease Z [Carnobacterium sp. 17-4] Length = 312 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH 90 P +R +S+ + + ER NT + D G Q+L + +D + TH H DHI Sbjct: 13 PAKQRNVTSIALKLLEER--NTIWLFDCGEATQQQILHTTLKPRKVDKIFITHLHGDHIF 70 Query: 91 GIDGL 95 G+ G Sbjct: 71 GLPGF 75 >gi|227831241|ref|YP_002833021.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|229580136|ref|YP_002838536.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229581209|ref|YP_002839608.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284998748|ref|YP_003420516.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] gi|227457689|gb|ACP36376.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|228010852|gb|ACP46614.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228011925|gb|ACP47686.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284446644|gb|ADB88146.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] Length = 209 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query: 56 VIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V++D G D +Q +R++ ++I ++ TH H DHI G++ L+ F Sbjct: 25 VVIDAGGDMSELIQAVRKEKINIRYIIATHGHFDHIMGVNQLKREF 70 >gi|323351213|ref|ZP_08086869.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] gi|322122437|gb|EFX94148.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] Length = 266 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|313105955|ref|ZP_07792217.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] gi|310878719|gb|EFQ37313.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] Length = 252 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|299144026|ref|ZP_07037106.1| metallo-beta-lactamase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518511|gb|EFI42250.1| metallo-beta-lactamase family protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 211 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Query: 52 SNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +N +VI+D G + ++ + ++ L++D ++ TH H DH +D +R +F Sbjct: 24 NNNSVIIDPGAEAKAIIKEIEDRNLTVDKIILTHAHPDHFGALDDVRKHF 73 >gi|218893028|ref|YP_002441897.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] gi|218773256|emb|CAW29068.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] Length = 252 Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|225570711|ref|ZP_03779734.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] gi|225160538|gb|EEG73157.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] Length = 265 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 27/165 (16%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT ++VDTG D + L + I+ +L TH H DHI G+ G F +K + Sbjct: 21 NTHLLVDTGISKKRIDQGLHTLGIKGEEIEGILITHEHIDHIQGL----GVF-SRKYEVP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA ++ + C ++ R +++ I +++ + G ++ P Sbjct: 76 IYATGGTIEGI-----KCTNSI-GRMPEGLLHEIEVDDEFLL-------GSLKIQPFAIS 122 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G+R VA TD+ + ++E L+ LD ++++A Sbjct: 123 HDARQPSGYRIEGDNKAVAVATDLGKYDEYTVEHLRELDAVLLEA 167 >gi|296390630|ref|ZP_06880105.1| hypothetical protein PaerPAb_20851 [Pseudomonas aeruginosa PAb1] Length = 252 Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYF 99 S+T +++D G + R L + DA+L TH HADHIHG++ L ++ Sbjct: 20 SDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVELLARHY 72 >gi|322385037|ref|ZP_08058687.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] gi|321270947|gb|EFX53857.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] Length = 268 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +DA+L TH H DHIHG+ L +K +D+YA Sbjct: 55 LDAILVTHEHKDHIHGVG-----VLARKYNLDIYA 84 >gi|262068222|ref|ZP_06027834.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] gi|291378090|gb|EFE85608.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] Length = 259 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 35/165 (21%) Query: 56 VIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VDTG + ++++ +++ I A+L TH H+DHI+G + +K I +Y Sbjct: 24 LLVDTGFSCKKTEEKLEMIGKKLSDISAILITHEHSDHING-----AGVIARKYDIPIYI 78 Query: 111 APDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P ES++ L D++ ++ I ++ V + +P H Sbjct: 79 TP-------ESYKAGASKLGQIDKSLIKFIDGAFILDDKVKV-----------LPFDVMH 120 Query: 169 GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 ++GFR + +A TD+ E +++D ++I++ Sbjct: 121 DAERTIGFRLESQLNKKIAISTDIGYITNIVREYFKDVDAMVIES 165 >gi|13324644|gb|AAK18826.1|AF327739_3 YycJ-like protein [Streptococcus thermophilus] Length = 243 Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 29/91 (31%) Query: 44 ISRVSERGSNTTVIVD--TGPDFYMQVLREQVL----------------------SIDAV 79 + SE G +++ TG FY++ +++L +DA+ Sbjct: 5 VEMTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAI 64 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 L TH H DHIHG+ L +K +D+YA Sbjct: 65 LVTHEHKDHIHGVG-----VLARKYGMDIYA 90 >gi|325694848|gb|EGD36753.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK150] Length = 266 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|288556155|ref|YP_003428090.1| ribonuclease Z [Bacillus pseudofirmus OF4] gi|288547315|gb|ADC51198.1| ribonuclease Z [Bacillus pseudofirmus OF4] Length = 305 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 22/108 (20%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 F LG G+ GVP I R S++ I + ++G T + D G Sbjct: 3 FHFLGTGS--GVPAI--------------ERNVSAMAIRFLQQKG--TQWLFDCGEATQH 44 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYA 110 Q+L + ID + TH H DHI G+ GL G F P+ +Y Sbjct: 45 QLLHSPITLTKIDRIFITHLHGDHIFGLPGLMGSRSFQGALNPLIIYG 92 >gi|226313456|ref|YP_002773350.1| hypothetical protein BBR47_38690 [Brevibacillus brevis NBRC 100599] gi|226096404|dbj|BAH44846.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 214 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 47 VSERGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 V+ +N T+++D G PD ++ L + ++ A+L TH H DHI G++ +R Sbjct: 22 VTNTATNQTIVIDPGMEPDQLLRALANK--NVVAILLTHAHLDHIGGLNQVR 71 >gi|327463118|gb|EGF09439.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1] gi|327474729|gb|EGF20134.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK408] gi|327490286|gb|EGF22074.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1058] Length = 266 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|125718370|ref|YP_001035503.1| beta-lactamase superfamily hydrolase [Streptococcus sanguinis SK36] gi|125498287|gb|ABN44953.1| Metal-dependent hydrolase, beta-lactamase superfamily I, putative [Streptococcus sanguinis SK36] Length = 266 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 53 LDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 >gi|268591921|ref|ZP_06126142.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] gi|291312309|gb|EFE52762.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] Length = 273 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 58/288 (20%), Positives = 112/288 (38%), Gaps = 48/288 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG AS G+P C K+ RT SS + + +++D P F Sbjct: 5 FLGTAASEGIPNPFCRCEHCQKARELRGKDIRTHSSAIVDDL--------MLIDVSPTFS 56 Query: 66 MQVLRE--QVLSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Q++R+ +++L+TH H DH + D + GY + P+ ++ + + Sbjct: 57 YQLMRDGMDATKFESLLFTHTHPDHFNVGDLFSRMEGYGFEIHHPLHIFGNDRAINGCLD 116 Query: 121 SF-RYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVIEAIPILQQHGRISSLGF 176 Y + D P V +E N P+ A + + ++++G+ Sbjct: 117 VLPGYSKERFDFHCLIPFV---TVERNGYKITPLLANHAKWELCYVYHIEKNGKA----- 168 Query: 177 RFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALK--NGLHSS--HFSLS------ESL 224 + Y D FP + + L+N LD ++ + NG + + H SL E L Sbjct: 169 ----IFYGHDSGWFPELTWKWLENKQLDIVVFECTYGLNGKNRTDNHMSLETVFAAKEKL 224 Query: 225 KKIELINPKNAI----LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ ++ + I ++H L ++ P + A+DG+ + Sbjct: 225 QQQGCLHSETQIAVSHISHSGKLLHEELEAICAPYNIRVAYDGLTLEA 272 >gi|15672524|ref|NP_266698.1| hypothetical protein L128550 [Lactococcus lactis subsp. lactis Il1403] gi|12723427|gb|AAK04640.1|AE006288_3 hypothetical protein L128550 [Lactococcus lactis subsp. lactis Il1403] gi|326406043|gb|ADZ63114.1| metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis CV56] Length = 210 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 52 SNTT--VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF 99 SN+T +I+D G D + R ++ +I A+L TH H DHI G++ LR +F Sbjct: 19 SNSTSHLIIDPGSDSSALLERLKITDKTISAILLTHAHFDHIIGLNELRKHF 70 >gi|17232644|ref|NP_489192.1| ribonuclease Z [Nostoc sp. PCC 7120] gi|41017571|sp|Q8YLZ0|RNZ_ANASP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|17134290|dbj|BAB76851.1| alr5152 [Nostoc sp. PCC 7120] Length = 322 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 21/184 (11%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIH 90 P R SS+ + R+ +R + D G Q+LR +V + + TH H DHI Sbjct: 13 PTRARNVSSVAL-RLPQRAE--LWLFDCGEGTQHQILRSDLKVSQLSRIFITHLHGDHIF 69 Query: 91 GIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 G+ GL + +D+Y ++ + RY V P VI ND Sbjct: 70 GLMGLLASCGLAGNVQRVDIYGPSGLNDYIQSASRYSHTHFSYPIKVHTVRPGVIYENDE 129 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G++ H RI++ G+R VA F E ++LQ I Sbjct: 130 ---FTVTCGLL--------HHRITAFGYR---VAEKDRAGRFDIEKAKELQIPPGRIYGQ 175 Query: 209 LKNG 212 LK G Sbjct: 176 LKRG 179 >gi|257455204|ref|ZP_05620439.1| ribonuclease Z [Enhydrobacter aerosaccus SK60] gi|257447166|gb|EEV22174.1| ribonuclease Z [Enhydrobacter aerosaccus SK60] Length = 349 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 16/131 (12%) Query: 33 PKNRRTRSSLKISRVS--ERGSNT-TVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHAD 87 P R ++L +S ++ R N ++VD G Q+L+ V+ + + TH H D Sbjct: 14 PTKHRNVTALAVSLINPYSRVKNVPWLLVDCGEATQHQLLKTPLSVMQLALICITHVHGD 73 Query: 88 HIHGIDGLRGYFLK--QKRPI---------DVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 H +G+ GL +K P+ D AA L SF F A+++R Sbjct: 74 HCYGLPGLLASMAMSGRKHPLTVIAPQAIADYLAAVQATTALMISFDIHFIAIENRAQGD 133 Query: 137 IVNPIVIENND 147 P+ ++ D Sbjct: 134 SYQPVTLDLTD 144 >gi|195577464|ref|XP_002078590.1| GD22440 [Drosophila simulans] gi|194190599|gb|EDX04175.1| GD22440 [Drosophila simulans] Length = 292 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 20/88 (22%) Query: 36 RRTRSSLKI-----SRVSERGSNT--------TVIVDTGPDFYMQ-------VLREQVLS 75 R T S ++I S ++ +G+NT +++DTG + Q VL+++ S Sbjct: 9 RLTSSVIRILGCNPSPMTLQGTNTYLLGSGSRRILIDTGDEDVPQYIAHLGDVLQQEKAS 68 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ID +L TH H DH+ G+ + G L K Sbjct: 69 IDTILLTHWHHDHVGGVKSIVGTKLADK 96 >gi|195339092|ref|XP_002036155.1| GM13170 [Drosophila sechellia] gi|194130035|gb|EDW52078.1| GM13170 [Drosophila sechellia] Length = 292 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 20/88 (22%) Query: 36 RRTRSSLKI-----SRVSERGSNT--------TVIVDTGPDFYMQ-------VLREQVLS 75 R T S ++I S ++ +G+NT +++DTG + Q VL+++ S Sbjct: 9 RLTSSVIRILGCNPSPMTLQGTNTYLLGSGSRRILIDTGDEDVPQYIAHLGDVLQQEKAS 68 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ID +L TH H DH+ G+ + G L K Sbjct: 69 IDTILLTHWHHDHVGGVKSIVGTKLADK 96 >gi|116627884|ref|YP_820503.1| beta-lactamase superfamily hydrolase [Streptococcus thermophilus LMD-9] gi|116101161|gb|ABJ66307.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus LMD-9] gi|312278465|gb|ADQ63122.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus ND03] Length = 270 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +DA+L TH H DHIHG+ L +K +D+YA Sbjct: 55 LDAILVTHEHKDHIHGVG-----VLARKYGMDIYA 84 >gi|259503099|ref|ZP_05746001.1| ribonuclease Z [Lactobacillus antri DSM 16041] gi|259168965|gb|EEW53460.1| ribonuclease Z [Lactobacillus antri DSM 16041] Length = 309 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHI 89 +P +R SS+ + + ER N + D G Q+L + I+ + TH H DHI Sbjct: 12 SPSKQRNVSSIALRLLEER--NAIWLFDVGEATQHQILNTTIRPRKIEKIFITHLHGDHI 69 Query: 90 HGIDGLRG--YFLKQKRPIDVYA 110 G+ GL F P+ +Y Sbjct: 70 FGLPGLLSSRSFQGGNEPLTIYG 92 >gi|299537587|ref|ZP_07050880.1| Beta-lactamase-like protein [Lysinibacillus fusiformis ZC1] gi|298726956|gb|EFI67538.1| Beta-lactamase-like protein [Lysinibacillus fusiformis ZC1] Length = 396 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 23/199 (11%) Query: 49 ERGSNTTVIVDTGPDFYMQ----VLRE-QVLSIDAVLYTHPHADHIHG-IDGLRGYFLKQ 102 E S T+++D G Q L+E + +D V+ THP ADHI G I L ++Q Sbjct: 50 ESPSGKTMLIDGGVKGAGQQIVSYLKELGINKLDIVVATHPDADHIGGLIPVLDNMTIEQ 109 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 Y + H ++F +D++ P V I +D+ + V+ A Sbjct: 110 -----FYDSGKV--HTSQTFEEMLTRIDEKNIPYHVPKI---GDDIEFDKEVNVKVLNAN 159 Query: 163 PILQQHGRIS-SLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLHSSHFSL 220 + S L +GNV++ +A A E LQ +++ + LK G H S+ S Sbjct: 160 DQATDNNDASIVLKMTYGNVSFLLTGDAGVALEKEMLQYDVEATV---LKAGHHGSNTSS 216 Query: 221 SESLKKIELINPKNAILTH 239 SE I+ + PK AIL++ Sbjct: 217 SEEF--IQAVKPKVAILSY 233 >gi|321469697|gb|EFX80676.1| hypothetical protein DAPPUDRAFT_303870 [Daphnia pulex] Length = 273 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 7/48 (14%) Query: 56 VIVDTG----PDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +++DTG P+++ VL+EQ ++D +L +H H DH+ G+D ++ Sbjct: 42 ILLDTGDGQVPEYFDLLQSVLKEQQATLDHILVSHWHPDHVGGVDKIQ 89 >gi|116621557|ref|YP_823713.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224719|gb|ABJ83428.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 269 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 9/47 (19%) Query: 53 NTTVIVDTGPDFYMQVLR-------EQVLSIDAVLYTHPHADHIHGI 92 NT ++VD G M+ LR E + SIDA++ TH H+DH+ G+ Sbjct: 32 NTRILVDAG--LSMRELRKRLALIGETLESIDAIIVTHEHSDHVSGL 76 >gi|295399165|ref|ZP_06809147.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312110233|ref|YP_003988549.1| beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294978631|gb|EFG54227.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311215334|gb|ADP73938.1| beta-lactamase domain protein [Geobacillus sp. Y4.1MC1] Length = 210 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R T V+ D G D ++ + EQ L+ A+L TH H DHI GI+ LKQK + Sbjct: 20 REDGTCVVFDPGGEGDKIVRRIEEQQLTPLAILLTHAHFDHIGGINE-----LKQKWELP 74 Query: 108 VY 109 +Y Sbjct: 75 IY 76 >gi|294785517|ref|ZP_06750805.1| metal dependent hydrolase [Fusobacterium sp. 3_1_27] gi|294487231|gb|EFG34593.1| metal dependent hydrolase [Fusobacterium sp. 3_1_27] Length = 260 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 35/165 (21%) Query: 56 VIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VDTG + ++ + +++ I A+L TH H+DHI+G + +K I +Y Sbjct: 24 LLVDTGFSCKKTEEKLEEIGKKLSDISAILITHEHSDHING-----AGVIARKYDIPIYI 78 Query: 111 APDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P ES+R L D++ ++ I N+ V + P H Sbjct: 79 TP-------ESYRAGAVKLGEIDKSLLNFIDGDFILNDKVKVS-----------PFDVMH 120 Query: 169 GRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + ++GF+ +A TD+ E +++D ++I++ Sbjct: 121 DAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIES 165 >gi|307189791|gb|EFN74064.1| Beta-lactamase-like protein 2 [Camponotus floridanus] Length = 437 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 9/60 (15%) Query: 56 VIVDTG----PDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 V+VD+G D Y++ VLRE+ +I+ ++ TH H DHI G++ +R LK P+D Sbjct: 186 VLVDSGETKTADAYIKLLNNVLREENATIEHLVVTHWHHDHIGGVEPVRS-LLKSLFPLD 244 >gi|108759389|ref|YP_628931.1| ribonuclease Z [Myxococcus xanthus DK 1622] gi|122981353|sp|Q1DEJ2|RNZ_MYXXD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|108463269|gb|ABF88454.1| ribonuclease Z [Myxococcus xanthus DK 1622] Length = 307 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 22/153 (14%) Query: 27 ACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPH 85 A PT +N +S ++ + + ++ D G Q++R ++DAV +TH H Sbjct: 13 AAQPTLHRN--------LSGLAVKAHSDLLLFDCGEGSQRQMVRYGTGFTVDAVFFTHFH 64 Query: 86 ADHIHGIDG-LRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 ADH GI G LR + + PI +Y P + L ++ +++ ++P ++ + Sbjct: 65 ADHYLGIIGFLRTLGMTGRSEPIHLYGPPSAKRLLHQAVHLGVESM---SFPVEIHE--L 119 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 ++ DV + G + A+ + RI++LG+ Sbjct: 120 KDGDV---VPRKGYAVHAVGVDH---RINALGY 146 >gi|34762341|ref|ZP_00143344.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887995|gb|EAA25059.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 260 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 35/165 (21%) Query: 56 VIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VDTG + ++ + +++ I A+L TH H+DHI+G + +K I +Y Sbjct: 24 LLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDIPIYI 78 Query: 111 APDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P ES+R L D++ ++ I N+ V + P H Sbjct: 79 TP-------ESYRAGAVKLGEIDKSLLNFIDGDFILNDKVKVS-----------PFDVMH 120 Query: 169 GRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + ++GF+ +A TD+ E +++D ++I++ Sbjct: 121 DAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIES 165 >gi|320547178|ref|ZP_08041472.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] gi|320448165|gb|EFW88914.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] Length = 213 Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 6/48 (12%) Query: 56 VIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYF 99 +IVD G D ++E++ S+D A+L TH H DHI G+D +R F Sbjct: 25 IIVDPGSD--TDKIKEKIQSLDKPVAAILLTHAHYDHIMGLDVIRDAF 70 >gi|167750556|ref|ZP_02422683.1| hypothetical protein EUBSIR_01532 [Eubacterium siraeum DSM 15702] gi|167656482|gb|EDS00612.1| hypothetical protein EUBSIR_01532 [Eubacterium siraeum DSM 15702] Length = 341 Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 55 TVIVDTGPDFYMQVLREQVLS-----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T+++D + Y + + S +D V+ THPH+DHI G+ + G F + +V Sbjct: 23 TMLIDAAENEYADRITNYIYSCGYNTLDYVVATHPHSDHIGGMADVIGAFNVE----NVI 78 Query: 110 AAPDCMKHLFESFRYCFKALDD 131 +P H +++ KA+DD Sbjct: 79 LSP--ATHTTKTYTNMLKAIDD 98 >gi|167749550|ref|ZP_02421677.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] gi|167657474|gb|EDS01604.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] Length = 263 Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 36/181 (19%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGI 92 SS K + V S + V+VD G F + LRE + ++ AVL TH H DH + Sbjct: 9 SSSKGNSVFVGDSTSGVLVDAGCSF--KALREGLALCGIPFEAVKAVLVTHEHIDHTKAL 66 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + ++ + VYA+ + LF L ++T +++P+ E VP+ M Sbjct: 67 GQIT-----KRTSVPVYASDGTARKLFSD------KLVEQT--AVIHPLS-EIKSVPVDM 112 Query: 153 KSAGGVIEAIPILQQ-HGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIID 207 I H S+G+ +FG VA CTD+ E + L D + I+ Sbjct: 113 D--------IDFFHTPHDAAESVGYTLKFGEHKVACCTDLGYVTDEVRDNLLGSDTVYIE 164 Query: 208 A 208 A Sbjct: 165 A 165 >gi|322516694|ref|ZP_08069603.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] gi|322124727|gb|EFX96165.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] Length = 276 Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +DA+L TH H DHIHG+ L +K +D+YA Sbjct: 61 LDAILVTHEHKDHIHGVG-----VLARKYGMDIYA 90 >gi|303248704|ref|ZP_07334957.1| Rhodanese domain protein [Desulfovibrio fructosovorans JJ] gi|302489869|gb|EFL49797.1| Rhodanese domain protein [Desulfovibrio fructosovorans JJ] Length = 462 Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 52 SNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++ V+VD D Y+++ R++ + I ++ TH HADHI G G L+ D++ Sbjct: 23 AHVCVVVDPKRDIDCYLEIARDEGMRIIGIIETHLHADHISG-----GQELRAATGADIH 77 Query: 110 AAPD 113 PD Sbjct: 78 IHPD 81 >gi|219122100|ref|XP_002181391.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407377|gb|EEC47314.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 748 Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 28/207 (13%) Query: 55 TVIVDTGPDFYMQVLREQ-------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++++D G Q+LR + I AV +HPHADH GI L + K P+ Sbjct: 471 SILLDVGEGTVGQLLRANSGPTSSTLAHIKAVWISHPHADHHLGILRLL-HDRKAPDPLL 529 Query: 108 VYAAPDCMKHLFESFRYCFKALD-DRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + L E YC D Y + N ++ EN +K A G+ + + Sbjct: 530 LMCPSPIISFLTE---YCSMDSDLSSAYVAVNCNDLIRENAKASFLLKEALGIDSSFAVP 586 Query: 166 QQH-----GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDA-LKNGLH---- 214 H G I G FG + Y D P+ L K D LI +A ++G+ Sbjct: 587 VTHCPYSFGLILE-GTCFGKLVYSGDCR--PSSQLAKCALGADLLIHEATFEDGMEVEAA 643 Query: 215 -SSHFSLSESLKKIELINPKNAILTHM 240 H ++ E+L + K +LTH Sbjct: 644 LKRHSTIGEALSVGMEMKAKCVVLTHF 670 >gi|312862955|ref|ZP_07723195.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] gi|311101815|gb|EFQ60018.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] Length = 270 Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +DA+L TH H DHIHG+ L +K +D+YA Sbjct: 55 LDAILVTHEHKDHIHGVG-----VLARKYGMDIYA 84 Searching..................................................done Results from round 2 >gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039891|gb|ACT56687.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT Sbjct: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE Sbjct: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN Sbjct: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM Sbjct: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP Sbjct: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 >gi|315122343|ref|YP_004062832.1| metal-dependent hydrolase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495745|gb|ADR52344.1| metal-dependent hydrolase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 269 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 220/268 (82%), Positives = 241/268 (89%), Gaps = 1/268 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKD+Y+FTILGC AS GVPRITGDWG CDP NPKNRRTRSSLK+SRVSERG +TTVI+DT Sbjct: 1 MKDFYYFTILGCSASPGVPRITGDWGLCDPKNPKNRRTRSSLKVSRVSERGGDTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDFYMQ+LRE+VLSIDAVLYTH HADH+HGIDGLRGYFL+QK PIDVYAAPDCM++L Sbjct: 61 GPDFYMQMLREKVLSIDAVLYTHEHADHVHGIDGLRGYFLQQKHPIDVYAAPDCMENLVN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SF YCFKA + +Y PI NP +IE DVPI +K AGGVIEAIPILQ+HG+ISSLGFRF N Sbjct: 121 SFGYCFKAPEGSSYLPIANPRIIE-KDVPISVKGAGGVIEAIPILQRHGKISSLGFRFSN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN+FP ESLEKLQNLDFLIIDAL+NGLH SHFSLSESLKKI+LINPKNAILTHM Sbjct: 180 VAYCTDVNSFPDESLEKLQNLDFLIIDALRNGLHGSHFSLSESLKKIDLINPKNAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 HVDLDYD V +STPSRVVPAFDGM F S Sbjct: 240 HVDLDYDKVFRSTPSRVVPAFDGMHFKS 267 >gi|222148594|ref|YP_002549551.1| metal dependent hydrolase [Agrobacterium vitis S4] gi|221735580|gb|ACM36543.1| metal dependent hydrolase [Agrobacterium vitis S4] Length = 272 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 149/271 (54%), Positives = 187/271 (69%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRI GDWG CDP NPKNRRTR+S I ++S G T V+VDT Sbjct: 1 MTYLRRFTILGCSSSPGVPRINGDWGDCDPLNPKNRRTRASFLIEQISPDGGKTVVLVDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R V S+DAV+Y+H HADH+HGID LRGY L Q+ I +YA P+ M+ + Sbjct: 61 GPDFREQMIRAGVQSLDAVVYSHAHADHLHGIDDLRGYSLMQRGRIPIYAEPETMRRIET 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F YC K D YPPIV P +IE+ D I + AGG I +P+ QQHG I SLGFR G+ Sbjct: 121 GFGYCLKTPDGSNYPPIVRPHIIEDMDSLIEIDGAGGRIALMPLEQQHGDIISLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+DV+ FP +++ +L LD L+IDAL+ H SH SLS+SL I+ + PK AILTHM Sbjct: 181 VAYCSDVSDFPEKTVPRLAGLDVLVIDALQYREHPSHLSLSQSLAWIDRLAPKRAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 H+ LDY+ VL+ TP V PA+D MQF +P Sbjct: 241 HIPLDYETVLRETPDHVEPAYDQMQFELTLP 271 >gi|239831995|ref|ZP_04680324.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239824262|gb|EEQ95830.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 274 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 144/269 (53%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG+CDP NPKNRR R+SL + R G +TTV++DTG Sbjct: 7 RNCLRFTLLGCGSSPGVPRINGDWGSCDPQNPKNRRRRASLLVERFDIDGKSTTVVIDTG 66 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q++ S+DA +YTHPHADHIHGID LR Y ++ +R +DVYA LFE+ Sbjct: 67 PDFRAQMIDAGAHSLDAAVYTHPHADHIHGIDDLRTYVVENRRLMDVYANRLTRNRLFEA 126 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P + AGG I P Q HG I SLGFR G+V Sbjct: 127 FGYCFETPAGSSYPPILSMHDI-APETPFSISGAGGAIRFEPFSQMHGDIESLGFRIGSV 185 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL L D LIIDAL+ H SHFSLSE+L+ IE + PK A+LTHMH Sbjct: 186 VYCTDVSAFPEQSLNYLGGADVLIIDALQYRPHPSHFSLSEALEWIEKLAPKRAVLTHMH 245 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ VL+ TP V P +DG++F P+ Sbjct: 246 VPLDYETVLRETPDNVEPGYDGLRFEVPL 274 >gi|163760144|ref|ZP_02167227.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] gi|162282543|gb|EDQ32831.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] Length = 274 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 139/272 (51%), Positives = 181/272 (66%), Gaps = 2/272 (0%) Query: 1 MKDYYH--FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M Y FT+LGC +S GVPR+ GDWGACDP NPKNRRTR++ IS++ G TTV V Sbjct: 1 MTQSYRRRFTVLGCASSPGVPRVNGDWGACDPQNPKNRRTRAAFLISQIGPDGGETTVAV 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DTGPDF Q++ +V S+DAV+YTH HADH+HGID LRG+ L Q++ I +YA P+ M + Sbjct: 61 DTGPDFREQMIVNKVHSLDAVIYTHSHADHVHGIDDLRGFALSQRKRIPIYADPETMARI 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F YC + YPPI P +I + D PI + AGG I P+ Q HG I SLG+R Sbjct: 121 RAGFGYCLETPPGSEYPPITEPRLINSLDDPILIDGAGGTIAIQPLDQVHGSIRSLGYRI 180 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G+VAYC DV+ FP ++E+LQ LD LIID L+ H SH S+ ++L I+ ++PK A LT Sbjct: 181 GDVAYCCDVSDFPRATVERLQGLDTLIIDCLQYKPHPSHLSIDQALWWIKRLDPKRAYLT 240 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 HMHV LDY+ V TP+RV P +DG+ F + Sbjct: 241 HMHVPLDYETVANETPARVEPCYDGLTFEVEV 272 >gi|209549394|ref|YP_002281311.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535150|gb|ACI55085.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 274 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 148/270 (54%), Positives = 188/270 (69%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPANPKNRRTRAAFMVQQFAPDGGVTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E Sbjct: 61 GPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YC + YPPIV P+VIEN D P+ ++ GG I+ P LQQHG I SLGFR G+ Sbjct: 121 AFGYCLETPPGSNYPPIVLPVVIENLDEPVEIRGPGGKIQFHPHLQQHGDIYSLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AILTHM Sbjct: 181 VAYCSDISDFPPQTVDKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDYD+V+ TP VVPA+D M F + + Sbjct: 241 HTPLDYDVVMAETPDHVVPAYDQMSFETEV 270 >gi|86357773|ref|YP_469665.1| metal-dependent hydrolase protein [Rhizobium etli CFN 42] gi|86281875|gb|ABC90938.1| probable metal-dependent hydrolase protein [Rhizobium etli CFN 42] Length = 272 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 151/269 (56%), Positives = 186/269 (69%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + + G TTV++DT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFAPDGGVTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + +YA M L E Sbjct: 61 GPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIYADQFTMDRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YC + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I+SLGFR G Sbjct: 121 AFGYCLETPPGSNYPPIVLPVVIENLDEPLEIRGPGGKIDFFPHIQQHGDINSLGFRIGG 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHM Sbjct: 181 VAYCSDISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLRPKRAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H LDYD V+ TP VVPAFD M F + Sbjct: 241 HTPLDYDAVMAQTPDHVVPAFDQMSFETE 269 >gi|110633937|ref|YP_674145.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110284921|gb|ABG62980.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 272 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 136/270 (50%), Positives = 179/270 (66%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S GVPRI GDWGACDP+NPKNRR R++ + R+ G T V++DT Sbjct: 1 MGDRIRLTILGCGSSPGVPRIIGDWGACDPSNPKNRRLRAAALVERIRPDGRVTRVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ + S+DAV+YTHPHADHIHGID LR Y L Q++ +D+YA ++ L + Sbjct: 61 GPDFRTQMIAAKATSLDAVVYTHPHADHIHGIDDLRSYVLAQRQLMDIYADEQTLQRLKD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ L YPPIV P +I ++ + GG + P+ Q HG I SLGFR GN Sbjct: 121 AFDYCFETLPGSNYPPIVVPHLIR-HEQTFTVSGEGGPLTFTPLPQIHGDIRSLGFRVGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC+DV+ FP E+L LQ L+ L++DAL+ H SH SL E+L+ I + P+ AILTHM Sbjct: 180 IAYCSDVSDFPPETLPLLQGLEILVLDALQYRPHPSHLSLGEALQWIGRLAPRRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDY+ V + TP V PA+DGM Sbjct: 240 HTPLDYEAVRQETPDNVDPAYDGMTLEVEA 269 >gi|300023244|ref|YP_003755855.1| metal-dependent hydrolase [Hyphomicrobium denitrificans ATCC 51888] gi|299525065|gb|ADJ23534.1| metal-dependent hydrolase [Hyphomicrobium denitrificans ATCC 51888] Length = 265 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 125/265 (47%), Positives = 158/265 (59%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 Y FTILGCG+S GVPR+ +WGACDP NPKN R R S + R G T V++DT PD Sbjct: 2 TYRFTILGCGSSGGVPRVGMNWGACDPQNPKNNRLRCSALVERKGP-GGQTAVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q+L ++ +DAVLYTH HADH HGID LR K+ IDVY L F Sbjct: 61 FRAQILATRLTGLDAVLYTHDHADHTHGIDDLRMIAFSMKKRIDVYFDAATGASLKSRFG 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ D Y PI+N I+ PI ++ +GG+I A PILQ HG + SLG+R GN+AY Sbjct: 121 YCFETPDGSPYMPILNGHEIDGVS-PIPVRGSGGLITAQPILQSHGTMPSLGYRIGNLAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N P S+ LQ LD I+DAL+ H SHFS+ ++L + PK ILTHM + Sbjct: 180 SPDINDLPEASISLLQGLDVWIVDALRYTPHESHFSVKQALSWAARLKPKRTILTHMTSE 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + P V PA+DGM + Sbjct: 240 LDYQKLANELPEGVEPAYDGMVVTF 264 >gi|294979848|pdb|3MD7|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Gmp From Brucella Melitensis Length = 293 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 26 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 85 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 86 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 145 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 146 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 204 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 205 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 264 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 265 VPLDYETVMRETPHHVEPGYDGLRFEVAV 293 >gi|150396506|ref|YP_001326973.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150028021|gb|ABR60138.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 284 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 135/270 (50%), Positives = 179/270 (66%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FT+LGCG+S GVPRITGDWGACDP+NP+NRR R++L I ++ G TTV++DT Sbjct: 1 MTFRRAFTVLGCGSSPGVPRITGDWGACDPSNPRNRRMRAALLIEQIGPDGGKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ V IDAVLYTH HADH+HGID LRG+ ++ +R + ++A M + + Sbjct: 61 GPDFRAQMIAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRRRVPIWADAFTMARIRD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 FRYC ++ YPPIV P VI ++ P+ + AGG I P++Q HG + SLGFR G+ Sbjct: 121 GFRYCLESPPGSGYPPIVEPYVIPDDLPPLTIHGAGGPIPFEPLMQFHGNVHSLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AYC+DV+ FP E+ KL LD L+ID L+ H SH SL +SL I + PK A+LTHM Sbjct: 181 FAYCSDVSDFPPETAGKLTGLDLLVIDTLQYKFHPSHLSLVQSLGWINRLQPKRAVLTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 HV LDY+ V TP V PA+D M+ + Sbjct: 241 HVPLDYETVSGETPDHVEPAYDMMRLEFDV 270 >gi|315364798|pdb|3PY6|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Gmp gi|315583668|pdb|3PY5|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Amp gi|322812816|pdb|3QH8|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Amp From Brucella Melitensis, Long Wavelength Synchrotron Data Length = 274 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 7 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 66 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 67 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 126 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 127 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 185 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 186 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 245 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 246 VPLDYETVMRETPHHVEPGYDGLRFEVAV 274 >gi|227822150|ref|YP_002826121.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] gi|227341150|gb|ACP25368.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] Length = 278 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 139/270 (51%), Positives = 185/270 (68%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGCG+S GVPRITGDWGACDP+NP+NRR+R++L + +++ G TTV++DT Sbjct: 1 MAFQRVFTILGCGSSPGVPRITGDWGACDPSNPRNRRSRAALLVEQIAPDGGRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ V IDAVLYTH HADH+HGID LRG+ ++ ++ + ++A M + + Sbjct: 61 GPDFRSQMVAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRKRVPIWADAFTMGRIRD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 FRYC ++ YPPIV P VI + + ++ AGG IE P++Q HG I SLGFR GN Sbjct: 121 GFRYCLESPPGSGYPPIVEPHVIPEDLPLVSVRGAGGPIEFQPLMQFHGNIHSLGFRVGN 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AYC+DV+ FP E++ KL+ LD L+ID L+ H SH SL +SL IE + PK A+LTHM Sbjct: 181 FAYCSDVSDFPTETVGKLEGLDLLVIDTLQYKFHPSHLSLVQSLGWIERLQPKRAVLTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 HV LDYD+V TP V PA+D M+ I Sbjct: 241 HVPLDYDVVRDETPDHVEPAYDMMRLEFEI 270 >gi|17987268|ref|NP_539902.1| PHNP protein [Brucella melitensis bv. 1 str. 16M] gi|225852502|ref|YP_002732735.1| beta-lactamase domain-containing protein [Brucella melitensis ATCC 23457] gi|256044657|ref|ZP_05447561.1| beta-lactamase domain protein [Brucella melitensis bv. 1 str. Rev.1] gi|256113544|ref|ZP_05454370.1| beta-lactamase domain protein [Brucella melitensis bv. 3 str. Ether] gi|256264007|ref|ZP_05466539.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|260564003|ref|ZP_05834489.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|265991081|ref|ZP_06103638.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994917|ref|ZP_06107474.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|17982945|gb|AAL52166.1| phnp protein [Brucella melitensis bv. 1 str. 16M] gi|225640867|gb|ACO00781.1| beta-lactamase domain protein [Brucella melitensis ATCC 23457] gi|260154019|gb|EEW89111.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|262766030|gb|EEZ11819.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263001865|gb|EEZ14440.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094151|gb|EEZ18073.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326409018|gb|ADZ66083.1| beta-lactamase domain-containing protein [Brucella melitensis M28] gi|326538728|gb|ADZ86943.1| beta-lactamase domain protein [Brucella melitensis M5-90] Length = 272 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFQPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|23501878|ref|NP_698005.1| hypothetical protein BR0997 [Brucella suis 1330] gi|62289921|ref|YP_221714.1| hypothetical protein BruAb1_1003 [Brucella abortus bv. 1 str. 9-941] gi|82699848|ref|YP_414422.1| beta-lactamase-like protein [Brucella melitensis biovar Abortus 2308] gi|148560492|ref|YP_001258938.1| hypothetical protein BOV_0964 [Brucella ovis ATCC 25840] gi|161618951|ref|YP_001592838.1| beta-lactamase domain-containing protein [Brucella canis ATCC 23365] gi|163843266|ref|YP_001627670.1| beta-lactamase domain-containing protein [Brucella suis ATCC 23445] gi|189024163|ref|YP_001934931.1| Beta-lactamase-like protein [Brucella abortus S19] gi|225627474|ref|ZP_03785511.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237815422|ref|ZP_04594420.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689228|ref|ZP_05152482.1| Beta-lactamase-like protein [Brucella abortus bv. 6 str. 870] gi|254693713|ref|ZP_05155541.1| Beta-lactamase-like protein [Brucella abortus bv. 3 str. Tulya] gi|254697363|ref|ZP_05159191.1| Beta-lactamase-like protein [Brucella abortus bv. 2 str. 86/8/59] gi|254701749|ref|ZP_05163577.1| Beta-lactamase-like protein [Brucella suis bv. 5 str. 513] gi|254704291|ref|ZP_05166119.1| Beta-lactamase-like protein [Brucella suis bv. 3 str. 686] gi|254706807|ref|ZP_05168635.1| Beta-lactamase-like protein [Brucella pinnipedialis M163/99/10] gi|254710083|ref|ZP_05171894.1| Beta-lactamase-like protein [Brucella pinnipedialis B2/94] gi|254730261|ref|ZP_05188839.1| Beta-lactamase-like protein [Brucella abortus bv. 4 str. 292] gi|256031579|ref|ZP_05445193.1| Beta-lactamase-like protein [Brucella pinnipedialis M292/94/1] gi|256159717|ref|ZP_05457464.1| Beta-lactamase-like protein [Brucella ceti M490/95/1] gi|256254979|ref|ZP_05460515.1| Beta-lactamase-like protein [Brucella ceti B1/94] gi|256257478|ref|ZP_05463014.1| Beta-lactamase-like protein [Brucella abortus bv. 9 str. C68] gi|260168709|ref|ZP_05755520.1| Beta-lactamase-like protein [Brucella sp. F5/99] gi|260545330|ref|ZP_05821071.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260566462|ref|ZP_05836932.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260754733|ref|ZP_05867081.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260757956|ref|ZP_05870304.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761779|ref|ZP_05874122.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883754|ref|ZP_05895368.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261213985|ref|ZP_05928266.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261222165|ref|ZP_05936446.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|261314274|ref|ZP_05953471.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317632|ref|ZP_05956829.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261752302|ref|ZP_05996011.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261754959|ref|ZP_05998668.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|261758186|ref|ZP_06001895.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|265988667|ref|ZP_06101224.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265998130|ref|ZP_06110687.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|294852411|ref|ZP_06793084.1| PhnP protein [Brucella sp. NVSL 07-0026] gi|297248322|ref|ZP_06932040.1| PhnP protein [Brucella abortus bv. 5 str. B3196] gi|306843872|ref|ZP_07476467.1| Beta-lactamase-like protein [Brucella sp. BO1] gi|23347817|gb|AAN29920.1| conserved hypothetical protein [Brucella suis 1330] gi|62196053|gb|AAX74353.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615949|emb|CAJ10972.1| Beta-lactamase-like [Brucella melitensis biovar Abortus 2308] gi|148371749|gb|ABQ61728.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|161335762|gb|ABX62067.1| beta-lactamase domain protein [Brucella canis ATCC 23365] gi|163673989|gb|ABY38100.1| beta-lactamase domain protein [Brucella suis ATCC 23445] gi|189019735|gb|ACD72457.1| Beta-lactamase-like protein [Brucella abortus S19] gi|225617479|gb|EEH14524.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237790259|gb|EEP64469.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260096737|gb|EEW80612.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260155980|gb|EEW91060.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|260668274|gb|EEX55214.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672211|gb|EEX59032.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674841|gb|EEX61662.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873282|gb|EEX80351.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915592|gb|EEX82453.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|260920749|gb|EEX87402.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|261296855|gb|EEY00352.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261303300|gb|EEY06797.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738170|gb|EEY26166.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|261742055|gb|EEY29981.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261744712|gb|EEY32638.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|262552598|gb|EEZ08588.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|264660864|gb|EEZ31125.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294821000|gb|EFG37999.1| PhnP protein [Brucella sp. NVSL 07-0026] gi|297175491|gb|EFH34838.1| PhnP protein [Brucella abortus bv. 5 str. B3196] gi|306275627|gb|EFM57351.1| Beta-lactamase-like protein [Brucella sp. BO1] Length = 272 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|116252218|ref|YP_768056.1| hypothetical protein RL2471 [Rhizobium leguminosarum bv. viciae 3841] gi|115256866|emb|CAK07960.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 272 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 149/270 (55%), Positives = 186/270 (68%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E Sbjct: 61 GPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YC + YPPIV PIVIEN D P+ + GG I P +QQHG I SLGFR G+ Sbjct: 121 AFGYCLETPPGSNYPPIVLPIVIENLDAPVEIHGPGGTIAFHPHIQQHGDIHSLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHM Sbjct: 181 VAYCSDISDFPPQTVEKLQNLDMLIIDALQYTYHPSHLSLEQSLDWISRLKPKRAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDYD+V+ TP VVPA+D M F + + Sbjct: 241 HTPLDYDVVMAETPDHVVPAYDQMSFETEV 270 >gi|153009411|ref|YP_001370626.1| beta-lactamase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561299|gb|ABS14797.1| beta-lactamase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 272 Score = 364 bits (936), Expect = 5e-99, Method: Composition-based stats. Identities = 141/268 (52%), Positives = 184/268 (68%), Gaps = 1/268 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+ FT+LGCG+S GVPRI GDWG+CDP NP+N+R R+SL + R + G++TTV++DTG Sbjct: 5 KNCLRFTVLGCGSSPGVPRINGDWGSCDPHNPRNKRRRASLLVERFDDTGNSTTVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q++ S+DA +YTHPHADHIHG+D LR Y ++ +R +DVYA LFE+ Sbjct: 65 PDFRAQMIDAGAHSLDAAVYTHPHADHIHGVDDLRTYVVENRRLMDVYANRLTRNRLFEA 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P + AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPAGSSYPPILSMHDI-APETPFSISGAGGPIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ L D LIIDAL+ H SHFSL E+L+ IE + PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLKHLGGADVLIIDALQYRPHPSHFSLGEALEWIEKLAPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 V LDY+ V++ TP V P +DG++F P Sbjct: 244 VPLDYETVMRETPGNVEPGYDGLRFEVP 271 >gi|241204711|ref|YP_002975807.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858601|gb|ACS56268.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 274 Score = 364 bits (935), Expect = 7e-99, Method: Composition-based stats. Identities = 149/270 (55%), Positives = 185/270 (68%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E Sbjct: 61 GPDFREQMIRSGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YC YPPIV PIVIEN D P+ + GG I P +QQHG I SLGFR G+ Sbjct: 121 AFGYCLATPPGSNYPPIVLPIVIENLDAPLEIHGPGGTIAFHPHIQQHGDIHSLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHM Sbjct: 181 VAYCSDISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKQAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDYD+V+ TP VVPA+D M F + + Sbjct: 241 HTPLDYDVVMAETPDHVVPAYDQMSFETEV 270 >gi|254719075|ref|ZP_05180886.1| Beta-lactamase-like protein [Brucella sp. 83/13] gi|265984065|ref|ZP_06096800.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|306838357|ref|ZP_07471202.1| Beta-lactamase-like protein [Brucella sp. NF 2653] gi|264662657|gb|EEZ32918.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|306406497|gb|EFM62731.1| Beta-lactamase-like protein [Brucella sp. NF 2653] Length = 272 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 182/269 (67%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLRYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|190891832|ref|YP_001978374.1| probable metal-dependent hydrolase protein [Rhizobium etli CIAT 652] gi|218510441|ref|ZP_03508319.1| probable metal-dependent hydrolase protein [Rhizobium etli Brasil 5] gi|190697111|gb|ACE91196.1| probable metal-dependent hydrolase protein [Rhizobium etli CIAT 652] Length = 271 Score = 364 bits (934), Expect = 9e-99, Method: Composition-based stats. Identities = 152/270 (56%), Positives = 186/270 (68%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + G TTV+VDT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGPDGV-TTVVVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E Sbjct: 60 GPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLRE 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +FRYC + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGFR G+ Sbjct: 120 AFRYCLETPPGSNYPPIVLPVVIENIDEPVEIRGPGGKIDFYPHIQQHGDIQSLGFRIGD 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP +++EKLQNLD LIIDAL+ H SH SL +SL I + PK AILTHM Sbjct: 180 VAYCSDISDFPPQTVEKLQNLDVLIIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDYD V+ TP VVPAFD M F + Sbjct: 240 HTPLDYDAVMGETPEHVVPAFDQMSFEIEV 269 >gi|254476061|ref|ZP_05089447.1| beta-lactamase domain protein [Ruegeria sp. R11] gi|214030304|gb|EEB71139.1| beta-lactamase domain protein [Ruegeria sp. R11] Length = 265 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 121/266 (45%), Positives = 157/266 (59%), Gaps = 4/266 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR+ G WG CDPTNP+N R R SL + R G+ TTV++DT PD Sbjct: 4 LRFTILGCGSSGGVPRLGGHWGDCDPTNPRNLRRRCSLLVERDGPDGT-TTVLIDTTPDM 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +D V+YTH HADH+HGID LR + + VYA D L F Y Sbjct: 63 RSQLLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRERVPVYADGDTQNALLSRFGY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + YPPI++ I+ P+ + GG I P HG I +LGFR G++AY Sbjct: 123 AFIQPEGSPYPPILDLRQIDG---PLTISGPGGDITLRPFEVNHGSIEALGFRIGDLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV P +L++L++LD IIDAL+ H +H L E+L+ IE + PK A+LT+MH+DL Sbjct: 180 PDVAKIPDSALDELRDLDCWIIDALRRKPHPTHLCLDEALEWIERMAPKRAVLTNMHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPI 270 DY V TP V PA+DGM PI Sbjct: 240 DYAQVAAETPDHVDPAYDGMVIEYPI 265 >gi|15965352|ref|NP_385705.1| hypothetical protein SMc01194 [Sinorhizobium meliloti 1021] gi|307312727|ref|ZP_07592358.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] gi|307317211|ref|ZP_07596652.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gi|15074532|emb|CAC46178.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306897299|gb|EFN28044.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gi|306899452|gb|EFN30084.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] Length = 278 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 135/270 (50%), Positives = 179/270 (66%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGCG+S GVPRITGDWGACDP+NP+NRR R++L + + + G TTV++DT Sbjct: 1 MAFRRAFTILGCGSSPGVPRITGDWGACDPSNPRNRRMRAALLVEQFAPDGGKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ V IDAVLYTH HADH+HGID LRG+ ++ +R + ++A M + + Sbjct: 61 GPDFRAQMIAANVRHIDAVLYTHAHADHLHGIDDLRGFVIENRRRVPIWADAFTMARIRD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 FRYC ++ YPPIV P VI ++ P+ + AGG I P++Q HG + SLGFR G Sbjct: 121 GFRYCLESPPGSGYPPIVEPYVIPDDLPPLTIHGAGGPISFEPLMQFHGNVHSLGFRIGG 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AYC+DV+ FP E++ KL LD L+ID L+ H SH SL +SL I + PK A+LTHM Sbjct: 181 FAYCSDVSDFPVETVSKLGGLDLLVIDTLQYKFHPSHLSLVQSLVWINRLQPKRAVLTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 HV +DY+ V TP V PA+D M+ I Sbjct: 241 HVPMDYETVCGETPDHVEPAYDMMRLEFDI 270 >gi|254714084|ref|ZP_05175895.1| Beta-lactamase-like protein [Brucella ceti M644/93/1] gi|254716860|ref|ZP_05178671.1| Beta-lactamase-like protein [Brucella ceti M13/05/1] gi|261218661|ref|ZP_05932942.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261321841|ref|ZP_05961038.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|260923750|gb|EEX90318.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261294531|gb|EEX98027.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] Length = 272 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 138/269 (51%), Positives = 182/269 (67%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRTSLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTH HADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHLHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNCLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|260459474|ref|ZP_05807729.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259035028|gb|EEW36284.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 272 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 135/269 (50%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S G PRITGDWG CDP NP+NRR R+++ + R+ G+ TTV++DT Sbjct: 1 MTDLLRLTILGCGSSPGTPRITGDWGNCDPDNPRNRRMRTAVLVERIKANGNRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V IDA +YTHPHADHIHGID LRG+ L Q+ IDV+A M L + Sbjct: 61 GPDFRQQMLLASVKRIDAAVYTHPHADHIHGIDDLRGFVLDQRHRIDVHADQPTMLRLRQ 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV+ +I+ + P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPPGSSYPPIVDAHIID-HAKPVVIEGEGGTLTLEPLPQIHGDIISLGFRIGA 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP ++E+L++LD LIIDAL+ H SH SL ++L+ IE + P++++LTHM Sbjct: 180 LAYCPDISDFPDATVERLRDLDVLIIDALQYRTHPSHLSLGQALEWIERLAPRHSVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V+ TP + PA+DGM P Sbjct: 240 HVPLDYATVMAETPDGIEPAYDGMVIEIP 268 >gi|89053765|ref|YP_509216.1| beta-lactamase-like [Jannaschia sp. CCS1] gi|88863314|gb|ABD54191.1| beta-lactamase-like protein [Jannaschia sp. CCS1] Length = 265 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 154/267 (57%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ G WG CDP NP+N R R SL + R E G+ TTV++DT PD Sbjct: 3 ELRFTILGCGSSGGVPRLGGHWGECDPANPRNARRRCSLLVEREGESGT-TTVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + +DAVLYTH HADH+HG+D LR + + VYA L F Sbjct: 62 LRAQLLDAGIGRLDAVLYTHAHADHVHGLDDLRMIVFNMRARLPVYADGATTNDLLNRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI++ I + + + GG I P HG I +LGFR G+VAY Sbjct: 122 YAFVQPPGSAYPPILD---INHLGGDVTIDGEGGSITFAPFEVNHGNIDALGFRIGDVAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+A P ++ LQ LD I+DAL+ H SH L SL I+ NP+ A+LT+MH+D Sbjct: 179 LPDVSAIPEDTWPMLQGLDTWILDALRRTPHPSHSHLDNSLAWIKRANPRRAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + TP V+PA+DG+ + + Sbjct: 239 LDYQTIADETPDNVIPAYDGLTLTYQV 265 >gi|256061089|ref|ZP_05451244.1| Beta-lactamase-like protein [Brucella neotomae 5K33] gi|261325091|ref|ZP_05964288.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] gi|261301071|gb|EEY04568.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] Length = 272 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 139/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP NPKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTHNRLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLQHIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|256369419|ref|YP_003106927.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|255999579|gb|ACU47978.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] Length = 272 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 138/269 (51%), Positives = 183/269 (68%), Gaps = 1/269 (0%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ FT+LGCG+S GVPRI GDWG CDP +PKNRR R+SL + R G+NT V++DTG Sbjct: 5 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKHPKNRRRRASLLVERYDAEGNNTVVVIDTG 64 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF MQ++ V +DA +YTHPHADHIHGID LR Y + R +DVYA L+++ Sbjct: 65 PDFRMQMIDSGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 124 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F YCF+ +YPPI++ I + P ++ AGG I P Q HG I SLGFR G+V Sbjct: 125 FGYCFETPVGSSYPPILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSV 183 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+AFP +SL+ +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMH Sbjct: 184 VYCTDVSAFPEQSLQYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMH 243 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 V LDY+ V++ TP V P +DG++F + Sbjct: 244 VPLDYETVMRETPHHVEPGYDGLRFEVAV 272 >gi|163868326|ref|YP_001609535.1| hypothetical protein Btr_1169 [Bartonella tribocorum CIP 105476] gi|161017982|emb|CAK01540.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 269 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 141/269 (52%), Positives = 179/269 (66%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP NPKN+R RSSL + R+ G TT+++DT Sbjct: 1 MFDRYRFTILGCGSSPGVPRPNGDWGACDPNNPKNKRYRSSLLVERIKPSGKKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA +KHL Sbjct: 61 GPDFRSQMIDARVSHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADKFTLKHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ D +Y PI+ +I+ D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKDSSYSPILKEHLIDE-DSQFIIQGQGGAISVNTHLQHHGNIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL +LD LI++AL+ H SHFS+ ++L+ IE + PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSKLMDLDVLILEALQFKSHPSHFSVDQALQWIEYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 LDY+ V+ P+ V PA G+ F + Sbjct: 240 DRSLDYNEVVNYVPAYVKPAHQGLIFETE 268 >gi|260428138|ref|ZP_05782117.1| beta-lactamase domain protein [Citreicella sp. SE45] gi|260422630|gb|EEX15881.1| beta-lactamase domain protein [Citreicella sp. SE45] Length = 266 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 114/268 (42%), Positives = 153/268 (57%), Gaps = 3/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPR+ G WG CDP NPKN R R SL + R + G+ T V++DT P Sbjct: 2 SELRFTILGCGSSGGVPRVGGHWGDCDPENPKNTRRRCSLLVERETGEGT-TRVLIDTTP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q++ + +DAVL+TH HADH HG+D LR ++ + V+A D L F Sbjct: 61 DMRQQLIDAGIGELDAVLWTHSHADHTHGLDDLRQVVFNRRARLPVWADGDTQNSLLLRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ I D P+ ++ AGG I P HG I +LGFR G++A Sbjct: 121 AYAFVQPEGSPYPPILDMHTI--TDRPVTIEGAGGAITFEPFEVNHGSIEALGFRIGDLA 178 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P +L+ LD I+DAL+ H SH L +L+ I PK A+LT+MH+ Sbjct: 179 YLPDVLHIPEAVWPRLEALDCWILDALRRSPHPSHAHLDLALEWIARARPKRAVLTNMHL 238 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY+ V TP + PA+DGM + Sbjct: 239 DLDYETVAAETPEHITPAYDGMVLRYAL 266 >gi|49474216|ref|YP_032258.1| hypothetical protein BQ06070 [Bartonella quintana str. Toulouse] gi|49239720|emb|CAF26099.1| hypothetical protein BQ06070 [Bartonella quintana str. Toulouse] Length = 270 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 140/270 (51%), Positives = 178/270 (65%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP NPKN+R RSSL + R+ G TTV++DT Sbjct: 1 MFDRYRFTILGCGSSPGVPRPNGDWGACDPNNPKNKRYRSSLLVERIQASGKKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA +KHL Sbjct: 61 GPDFRSQMIDARVNHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADAFTLKHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I N D ++ G I LQ HG I SLGFR GN Sbjct: 121 AFSYCFQTQKGSFYSPILKEHLI-NEDSQFIIQGQGDTITVKTHLQFHGTIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L+KL NL+ LII+AL+ H SH S+ ++L+ I+ + PK AILTHM Sbjct: 180 VAYCTDVSKFPEKTLQKLMNLEVLIIEALQFESHPSHLSVDQALQWIKYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DRSLDYNEVINYVPAYVKPAYQGLTFETNV 269 >gi|114763014|ref|ZP_01442444.1| hypothetical protein 1100011001344_R2601_21081 [Pelagibaca bermudensis HTCC2601] gi|114544338|gb|EAU47346.1| hypothetical protein R2601_21081 [Roseovarius sp. HTCC2601] Length = 266 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 114/268 (42%), Positives = 151/268 (56%), Gaps = 3/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPR+ G WG CDP NP+N R R S+ + R +G+ T V++DT P Sbjct: 2 SELRFTILGCGSSGGVPRLGGHWGECDPANPRNTRRRCSMLVERDGAQGT-TRVLIDTTP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L + +DAV +TH HADH HG+D LR ++ + V+A D LF F Sbjct: 61 DMRQQLLDAGIGHLDAVAWTHSHADHTHGLDDLRQIVFNRRDRLPVWADGDTQNALFARF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI+ I D P ++ AGG I P HG I +LGFR +VA Sbjct: 121 GYAFVQPEGSPYPPILEMHTI--GDGPFTIEGAGGPITLTPFEVDHGSIDALGFRIADVA 178 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P S LQ LD I+DAL+ H +H L +L+ I PK A+LT+MH+ Sbjct: 179 YLPDVIRIPEASWAHLQGLDCWILDALRRTPHPTHAHLDLALEWIAKAQPKEAVLTNMHI 238 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLD+D+V TP + PA+DGM + Sbjct: 239 DLDHDIVAAETPDHIRPAYDGMVLRYAL 266 >gi|319783481|ref|YP_004142957.1| hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169369|gb|ADV12907.1| hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 275 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 141/269 (52%), Positives = 184/269 (68%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGCG+S G PRITGDWG CDP NP+NRRTR++ + R++ GS TTV++DT Sbjct: 1 MTDRLRLTILGCGSSPGTPRITGDWGNCDPDNPRNRRTRAAALVERIAANGSRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V +DAV+YTHPHADHIHGID LRG+ L Q++ IDV+A M L E Sbjct: 61 GPDFRQQMLLAGVKRVDAVVYTHPHADHIHGIDDLRGFVLDQRQLIDVHADRATMLRLRE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV P +I++ P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPQGSSYPPIVRPHLIDHTR-PVVVEGEGGTLTLEPLPQIHGDIVSLGFRIGG 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP + E+L +LD LIIDAL+ H SH SL E+L+ I+ + P +A+LTHM Sbjct: 180 LAYCPDISDFPEPTAERLGDLDVLIIDALQYRTHPSHLSLGEALEWIQRLAPIHAVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V+ TP+ V PA+DGM P Sbjct: 240 HVPLDYVSVMAETPANVEPAYDGMVIEIP 268 >gi|218463184|ref|ZP_03503275.1| probable metal-dependent hydrolase protein [Rhizobium etli Kim 5] Length = 271 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 148/270 (54%), Positives = 187/270 (69%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + TTV+VDT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGPD-RVTTVVVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M L E Sbjct: 60 GPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMDRLRE 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +FRYC + YPPIV P+VI+N D P+ ++ GG I+ P +QQHG I SLGFR G+ Sbjct: 120 AFRYCLETPPGSNYPPIVLPVVIKNIDEPVEIRGPGGKIDFYPHIQQHGDIHSLGFRIGD 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+D++ FP +++EKLQ+LD L+IDAL+ H SH SL +SL I + PK AILTHM Sbjct: 180 VAYCSDISDFPPQTVEKLQDLDVLVIDALQYTYHPSHLSLEQSLDWIGRLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H LDYD+V+ TP VVPA+D M F + I Sbjct: 240 HTPLDYDVVMAETPDHVVPAYDQMSFETEI 269 >gi|13470648|ref|NP_102217.1| hydrolase [Mesorhizobium loti MAFF303099] gi|14021390|dbj|BAB48003.1| probable hydrolase [Mesorhizobium loti MAFF303099] Length = 272 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 135/269 (50%), Positives = 177/269 (65%), Gaps = 1/269 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S G PRITGDWG CDP NP+NRR R++ + RV+ G TTV++DT Sbjct: 1 MTGRLRLTILGCGSSPGTPRITGDWGNCDPANPRNRRMRTAALVERVAADGGRTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L V IDAV+YTHPHADHIHGID LRGY L+Q+ ID++A M L + Sbjct: 61 GPDFREQMLLASVKRIDAVVYTHPHADHIHGIDDLRGYVLEQRHLIDIHADQPTMLRLRQ 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +YPPIV +I+ + P+ ++ GG + P+ Q HG I SLGFR G Sbjct: 121 AFGYCFETPPGSSYPPIVRAHIID-HAKPVVIEGEGGALALEPLPQIHGDIISLGFRIGG 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D++ FP + ++L+ L+ L+IDAL+ H SH SL ++L IE + PK A+LTHM Sbjct: 180 LAYCPDISDFPDPTADRLRGLEMLVIDALQYNPHPSHLSLGQALGWIEKLAPKQAVLTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HV LDY V P+ V PA+DGM P Sbjct: 240 HVPLDYAKVKGEMPANVTPAYDGMVIEIP 268 >gi|304391679|ref|ZP_07373621.1| phnp protein [Ahrensia sp. R2A130] gi|303295908|gb|EFL90266.1| phnp protein [Ahrensia sp. R2A130] Length = 271 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 134/266 (50%), Positives = 171/266 (64%), Gaps = 4/266 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPRI DWG CDP NPKNRR R+S+ + + G+ TTV++DTGP Sbjct: 6 GQTRFTILGCGSSPGVPRIADDWGNCDPKNPKNRRRRASMLVEKFGPDGT-TTVVIDTGP 64 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--KRPIDVYAAPDCMKHLFE 120 DF Q++ + DAV+YTH HADHIHGID LR + + +R + ++A + L E Sbjct: 65 DFREQMITAGISWADAVVYTHSHADHIHGIDDLRSFVINDPKRRRVPIWADDFTSQRLHE 124 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F YCF+ + YPPI++ I P + AGG IE +P Q HG I SLGFR GN Sbjct: 125 GFGYCFETPEGSNYPPILDENRIVAKQ-PFTISGAGGDIELLPFEQPHGNILSLGFRIGN 183 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC+DV+A +L L+NLD IIDAL+ H SH SL ++L IE + P+ AILTHM Sbjct: 184 VAYCSDVSALDERALPYLENLDVWIIDALQYREHPSHLSLDQTLAWIEKLKPQRAILTHM 243 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 H LDY+ VL +TP V PAFDG+QF Sbjct: 244 HTPLDYETVLAATPDHVEPAFDGLQF 269 >gi|159184781|ref|NP_354500.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] gi|159140069|gb|AAK87285.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] Length = 274 Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats. Identities = 141/267 (52%), Positives = 181/267 (67%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FT+LGC +S GVPRI GDWGACDP NP+NRRTR++ + ++ G TTV++DTGPD Sbjct: 5 RRRFTVLGCASSPGVPRINGDWGACDPQNPRNRRTRAAFMVEQIGPDGGKTTVVIDTGPD 64 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q++ +V ++DAVLYTH HADH+HGID LR YF QK I ++A P M + + F Sbjct: 65 FREQMIAAKVQAVDAVLYTHAHADHLHGIDDLRIYFALQKSRIPIWADPVTMARIRDGFA 124 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YC + YPPIV P +I + + P+ + AGG I +QQHG + SLGFR G+VAY Sbjct: 125 YCLETPAGSNYPPIVRPQLIADINDPVIIDGAGGPIPFKVHMQQHGDVHSLGFRIGDVAY 184 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV+ FPAESL KL LD L+IDAL+ H SH SL ++L IE + PK AILTHMH+ Sbjct: 185 CTDVSDFPAESLPKLTGLDVLVIDALQYRYHPSHLSLEQALGWIEALAPKRAILTHMHIP 244 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDYD V++ TP V PA+D M+F I Sbjct: 245 LDYDTVMRETPDHVEPAYDQMRFEVEI 271 >gi|319408567|emb|CBI82220.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 270 Score = 358 bits (920), Expect = 4e-97, Method: Composition-based stats. Identities = 140/270 (51%), Positives = 179/270 (66%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACD NPKN+R R+SL + R+ + G TTV++DT Sbjct: 1 MFDCYRFTILGCGSSPGVPRPNGYWGACDANNPKNKRYRTSLLVERIDKSGKKTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+++ V +DA +YTHPHADH+HGID LR Y L QK ID+YA +K+L E Sbjct: 61 GPDFRSQMIKSHVNYLDAAVYTHPHADHVHGIDDLRSYALAQKCLIDIYANAFTLKYLNE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SF YCF+ Y PI+ +I N + ++ GG I LQ HG I+SLGFR GN Sbjct: 121 SFGYCFQTPKGSNYSPILKAHLI-NENSKFTIQGQGGAITFNTHLQFHGAINSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN FP E+L+ L +LD LIID+L+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 180 VAYCTDVNQFPVEALQNLMDLDVLIIDSLQFKPHPSHFSVDQALHWIKYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ VL P V PA+ G+ F + + Sbjct: 240 DNSLDYNDVLNYVPPNVEPAYQGLTFETNV 269 >gi|254469460|ref|ZP_05082865.1| lipoyltransferase, putative [Pseudovibrio sp. JE062] gi|211961295|gb|EEA96490.1| lipoyltransferase, putative [Pseudovibrio sp. JE062] Length = 272 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 128/270 (47%), Positives = 165/270 (61%), Gaps = 2/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + TILGCG+S GVPRI GDWG CDP PKNRR R +L + R SE G+ TT++VDT Sbjct: 1 MTSNFKVTILGCGSSTGVPRIGGDWGVCDPDEPKNRRRRCALLVQRFSENGT-TTIVVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L V +DAVLYTH HADH+HGID LR + L Q+ + VY K + Sbjct: 60 GPDLREQMLAAGVTHVDAVLYTHAHADHLHGIDDLRFFALMQRAKVPVYMDEFTSKRVRS 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF YPPI++ + + P+ + AGG I A+P L HG I +LGFRF + Sbjct: 120 AFDYCFVTPPGSGYPPILSENRLTDG-TPVTINGAGGPITALPFLVHHGDIDALGFRFQD 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DVN P S L+ LD IIDAL+ H SHF ++++L+ IE + P N+ILT++ Sbjct: 179 LAYTPDVNDIPESSFHALKGLDTWIIDALREKPHQSHFCVNDALEWIERMKPANSILTNL 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H DLDY + P V PAFDG P Sbjct: 239 HCDLDYQRLKSQLPENVSPAFDGRAVEFPA 268 >gi|149914150|ref|ZP_01902681.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] gi|149811669|gb|EDM71502.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] Length = 265 Score = 358 bits (919), Expect = 6e-97, Method: Composition-based stats. Identities = 118/268 (44%), Positives = 151/268 (56%), Gaps = 4/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 F ILGCG+S GVPR+ G WG CDP NP+N R R SL I R G T ++DT P Sbjct: 2 GEMRFIILGCGSSGGVPRLGGHWGDCDPENPRNTRRRCSLLIEREGP-GGITRALIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L V +DAVLYTH HADH+HGID LR +R + V+A D L+ F Sbjct: 61 DLRAQLLDAGVGELDAVLYTHSHADHVHGIDDLRMIVFNMRRRLPVWADGDTQNALYARF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F +D YPPI++ I + + AGG I P HG I SLGFR G++A Sbjct: 121 GYAFIQPEDSPYPPILDMHTISG---DVTIDGAGGPITLTPFEVNHGSIESLGFRIGDLA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P + L+ LD I+DAL+ H +H L +SL I + P+ A+LT+MH+ Sbjct: 178 YLPDVAQIPDDVWPMLEGLDCWILDALRRTPHPTHSHLEQSLDWIARVAPRRAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY V TP+ V PA+DGM + P Sbjct: 238 DLDYQTVADETPAHVTPAYDGMILTYPA 265 >gi|84516817|ref|ZP_01004175.1| hypothetical protein SKA53_06557 [Loktanella vestfoldensis SKA53] gi|84509285|gb|EAQ05744.1| hypothetical protein SKA53_06557 [Loktanella vestfoldensis SKA53] Length = 269 Score = 357 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 117/269 (43%), Positives = 159/269 (59%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPR+ DWG CDPT+P+N R R SL I+R + G+ T V++DT Sbjct: 1 MSDTISFTILGCGSSGGVPRLGNDWGDCDPTDPRNARRRCSLLITRQGKDGT-TRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L V ++DAV+YTH HADH+HGID LR + ++ + V+A D L Sbjct: 60 SPDMRSQLLDAGVSTVDAVVYTHAHADHVHGIDDLRMIVFQTRQRLPVWADGDTCDALLA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F YPPI + +I+ + ++ AGG + P HG I +LGFR G Sbjct: 120 RFGYAFVQPAGSDYPPICDLNLIDG---DVTIEGAGGPVTLTPFKVAHGNIDALGFRIGA 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV+ P L LD I+DAL+ H SH L ++L I + P+ A+LT+M Sbjct: 177 VAYLPDVSDIPDAVWPALAGLDCWIVDALRRKPHPSHAHLEKTLGWITKVAPRQAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HVDLDY + TP+ V+PA+DG+ + P Sbjct: 237 HVDLDYATIAAETPAHVLPAYDGLTLTFP 265 >gi|325292847|ref|YP_004278711.1| metal dependent hydrolase [Agrobacterium sp. H13-3] gi|325060700|gb|ADY64391.1| metal dependent hydrolase [Agrobacterium sp. H13-3] Length = 276 Score = 357 bits (918), Expect = 7e-97, Method: Composition-based stats. Identities = 138/267 (51%), Positives = 181/267 (67%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FT+LGC +S GVPRI GDWGACDP NP+NRRTR++ + ++ G TTV++DTGPD Sbjct: 5 RRRFTVLGCSSSPGVPRINGDWGACDPENPRNRRTRAAFMVEQIGPDGGKTTVVIDTGPD 64 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q++ +V ++DAVLYTH HADH+HGID LR YF Q+ I +YA P M +++ F Sbjct: 65 FREQMIAAKVEAVDAVLYTHAHADHLHGIDDLRIYFAIQQSRIPIYADPVTMARIWDGFA 124 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YC + +YPPIV P +I + D + + AGG I +QQHG + SLGFR GNVAY Sbjct: 125 YCLETPPGSSYPPIVEPRIIADIDATLIIDGAGGSIPFNVHMQQHGDVHSLGFRIGNVAY 184 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV+ FP ES+ KL LD L+IDAL++ H SH SL ++L I+ PK AILTHMH+ Sbjct: 185 CTDVSDFPVESVPKLAGLDVLVIDALQHRYHPSHLSLEQALGWIDRFAPKRAILTHMHIP 244 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDYD V++ TP V PA+D M+F + Sbjct: 245 LDYDTVMRETPDHVEPAYDQMRFEVEL 271 >gi|240850629|ref|YP_002972029.1| putative PhnP protein [Bartonella grahamii as4aup] gi|240267752|gb|ACS51340.1| putative PhnP protein [Bartonella grahamii as4aup] Length = 269 Score = 357 bits (918), Expect = 8e-97, Method: Composition-based stats. Identities = 141/270 (52%), Positives = 177/270 (65%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG S GVPR GDWG CDP NPKN+R RSSL + R+ G TT+++DT Sbjct: 1 MCDQYRFTILGCGPSPGVPRPNGDWGTCDPNNPKNKRYRSSLLVERIKPSGDKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V +DA LYTH HADHIHGID LR Y L QK ID+YA ++HL Sbjct: 61 GPDFRSQMIDARVSHLDAALYTHSHADHIHGIDDLRSYALAQKCLIDIYADRFTLEHLKS 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +Y PI+ +I N D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKASSYSPILKEHLI-NEDSQFIIQGQGGAISVNTHLQHHGNIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL +LD LII+AL+ H SHFS+ ++L+ IE + PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSKLMDLDVLIIEALQFKSHPSHFSVDQALQWIEYLKPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ PS V PA+ G+ F + Sbjct: 240 DRSLDYNKVINYVPSYVKPAYQGLIFETDA 269 >gi|163732225|ref|ZP_02139671.1| hypothetical protein RLO149_02202 [Roseobacter litoralis Och 149] gi|161394523|gb|EDQ18846.1| hypothetical protein RLO149_02202 [Roseobacter litoralis Och 149] Length = 266 Score = 357 bits (917), Expect = 9e-97, Method: Composition-based stats. Identities = 113/268 (42%), Positives = 162/268 (60%), Gaps = 4/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPR+ G WG CDP N KNRR R SL + R+ G TTV++DT P Sbjct: 2 GEIQFTILGCGSSGGVPRLGGLWGDCDPNNAKNRRRRCSLLVERIGADG-KTTVLIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L E + +D V+YTH HADH+HGID LR + + V+A L + F Sbjct: 61 DVREQLLGENIGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARLPVWADIPTKDALMQRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ +I+ + + AGG + P L HG + +LGFR G+VA Sbjct: 121 SYVFVQPEGSNYPPILDMNIIDG---DVTIDGAGGPVTLSPFLVGHGGMDALGFRIGDVA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P + KL LD I+DAL+ H +H L+++L+ +E + P++A+LT+MH+ Sbjct: 178 YLPDVAHIPDDVWTKLDGLDCWIVDALRRDPHPTHSHLAQTLEWVERLKPRSAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY+ V+ TP + PA+DG++ + P+ Sbjct: 238 DLDYETVMAETPDHIQPAYDGLRLTYPV 265 >gi|110680633|ref|YP_683640.1| hypothetical protein RD1_3469 [Roseobacter denitrificans OCh 114] gi|109456749|gb|ABG32954.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 266 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 159/267 (59%), Gaps = 4/267 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D FTILGCG+S GVPR+ G WG CD N KNRR R SL + R+ G TTV++DT P Sbjct: 2 DQMEFTILGCGSSGGVPRLGGLWGDCDRHNAKNRRRRCSLLVERIGPDG-RTTVLIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L E + +D V+YTH HADH+HGID LR + + V+A L + F Sbjct: 61 DLREQLLSENIGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARLPVWADIPTKDALMQRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ I+ + + AGG + P L HG + +LGFR G+VA Sbjct: 121 GYVFVQPEGSNYPPILDMNTIDG---DVTIDGAGGPVTLSPFLVGHGGMDALGFRIGDVA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV P KL L+ I+DAL+ H +H L+++L+ IE + PK+A+LT+MH+ Sbjct: 178 YLPDVAQIPQGVWRKLNGLECWIVDALRRDPHPTHSHLAQTLEWIEQVKPKSAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 DLDY+ V+ TP V PA+DG++ + P Sbjct: 238 DLDYETVMAETPDHVQPAYDGLRLTYP 264 >gi|319405652|emb|CBI79275.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 270 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 137/270 (50%), Positives = 174/270 (64%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACD NPKN+R R+SL + R+ + G TTVI+DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGYWGACDSNNPKNKRYRTSLLVQRIDKSGMKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ ++ ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARISHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I N ++ GG I P LQ HG SLGFR GN Sbjct: 121 AFGYCFQTQKGSHYSPILKENLIYENSE-FKIQGQGGAIVFQPHLQIHGGTHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L L NLD LIIDAL+ H SHFS+ ++L I+ PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSCLMNLDVLIIDALQFAPHPSHFSVDQALYWIKYFKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V S P+ V PA+ G+ F + + Sbjct: 240 DNSLDYNAVANSVPAHVEPAYQGLIFETNV 269 >gi|126736698|ref|ZP_01752437.1| hypothetical protein RCCS2_02795 [Roseobacter sp. CCS2] gi|126713813|gb|EBA10685.1| hypothetical protein RCCS2_02795 [Roseobacter sp. CCS2] Length = 267 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 125/271 (46%), Positives = 159/271 (58%), Gaps = 4/271 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D HF ILGCG+S GVPR+ G WGACDPTNPKNRRTR SL ++R T V++DT Sbjct: 1 MSDELHFRILGCGSSGGVPRLGGLWGACDPTNPKNRRTRCSLLVTRTRGD-QVTRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L ++ ++DAV+YTH HADH+HG+D LR + + V+A D L Sbjct: 60 SPDMRAQLLEAEIGTLDAVVYTHSHADHVHGLDDLRMIVFNMRARLQVWADGDTSNDLLG 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F +YPPI I+ I + AGG I P HG I +LGFR G+ Sbjct: 120 RFGYAFVQPKGSSYPPICELNAIKG---DITIGGAGGDIVLRPFEVDHGSIEALGFRIGD 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV+ P + L+NLD I+DAL+ H +H L+++L I + PK AILT+M Sbjct: 177 VAYLPDVSDIPDDVWPTLENLDIWIVDALRRDPHPTHAHLAKTLDWIAKVAPKRAILTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 H DLDY V TP + PAFDGM S P P Sbjct: 237 HNDLDYATVAAETPDHIAPAFDGMTISVPAP 267 >gi|49475614|ref|YP_033655.1| hypothetical protein BH08500 [Bartonella henselae str. Houston-1] gi|49238421|emb|CAF27648.1| hypothetical protein BH08500 [Bartonella henselae str. Houston-1] Length = 269 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 138/270 (51%), Positives = 177/270 (65%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGAC+P NPKN+R RSSL + R+ + G TT+++DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGDWGACNPNNPKNKRYRSSLLVERIHKSGKKTTIVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ V +DA LYTH HADHIHGID LR Y L QK ID+YA ++HL Sbjct: 61 GPDFRSQMIDACVNHLDAALYTHSHADHIHGIDDLRSYALAQKSLIDIYADSFTLRHLKN 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ +Y PI+ +I N D ++ GG I LQ HG I SLGFR GN Sbjct: 121 AFGYCFQTPKGSSYLPILKAHLI-NEDSQFIIQGQGGAIHVNTHLQLHGSIHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L KL NL+ LII+AL+ H SH S+ ++L+ I+ + PK AILTHM Sbjct: 180 VAYCTDVSQFPKKTLPKLMNLNVLIIEALQFKSHPSHLSVDQALQWIKYLQPKQAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P V PA+ G+ F + Sbjct: 240 DRSLDYNEVINYLPPHVKPAYQGLIFEADA 269 >gi|84683870|ref|ZP_01011773.1| hypothetical protein 1099457000264_RB2654_20893 [Maritimibacter alkaliphilus HTCC2654] gi|84668613|gb|EAQ15080.1| hypothetical protein RB2654_20893 [Rhodobacterales bacterium HTCC2654] Length = 267 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 109/267 (40%), Positives = 156/267 (58%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ G+WGACDP NPKN R R S+ + R E + T +++DT PD Sbjct: 3 RLTFTILGCGSSGGVPRLGGNWGACDPANPKNARRRCSMLVERA-EGDATTRILIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V ++DAV+YTH HADH+HGID LR ++ + VYA LF F Sbjct: 62 LRAQLLDANVGALDAVIYTHAHADHVHGIDDLRMIVYNMRKRLPVYADGATQDALFSRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + +YPPI++ I + + + AGG I P +HG I +LGFR + AY Sbjct: 122 YAFVQPEGSSYPPILDMHTIRDGE-DFTLTGAGGPITFTPFEVEHGNIDALGFRVADFAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ + LQ+LD ++DAL+ H +H + +SL+ +E K +LT+MH+D Sbjct: 181 LPDVSDMKDAAWNALQDLDCWVLDALRYTPHPTHAHVEKSLEWLERSGTKRGVLTNMHID 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +D+ + TP+ + A+DGMQ S I Sbjct: 241 IDHSTIEAETPAHITAAYDGMQISYEI 267 >gi|294676797|ref|YP_003577412.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] gi|294475617|gb|ADE85005.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] Length = 266 Score = 355 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 119/269 (44%), Positives = 159/269 (59%), Gaps = 4/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPRI G WG CDP NPKNRR+R SL I R+ G T V++DT Sbjct: 1 MADRLRFTILGCGSSGGVPRIGGHWGECDPANPKNRRSRCSLLIERIGAAG-ITRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+LR +V ++DAV +THPHADH+HG+D +R + V+A + L Sbjct: 60 SPDLREQLLRAEVATLDAVAFTHPHADHMHGLDDIRQITFNMHARLPVWADEPTTEALIN 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F YPPI + I P + AGG + +P +HG I +LGFR G Sbjct: 120 RFGYAFVQPAGSAYPPICDLQAITG---PFTVTGAGGPVTLVPFRVEHGNIPALGFRIGG 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV+A P ++ + LQ+LD ++DAL+ H SH L+ SL I P+ A+LT+M Sbjct: 177 LAYLPDVSAIPDDAWDCLQDLDIWVLDALRRKPHPSHAHLALSLDWIARARPREAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H+DLD+ + + TP+ V AFDGM P Sbjct: 237 HIDLDHSDLERETPAHVRAAFDGMVLELP 265 >gi|121602590|ref|YP_989107.1| metallo-beta-lactamase family protein [Bartonella bacilliformis KC583] gi|120614767|gb|ABM45368.1| metallo-beta-lactamase family protein [Bartonella bacilliformis KC583] Length = 271 Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats. Identities = 139/270 (51%), Positives = 173/270 (64%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR G WGACDP NPKN+R R+SL + R+ + G TTVI+DT Sbjct: 1 MSDCYRFTILGCGSSPGVPRPNGFWGACDPNNPKNKRYRTSLLVERIQKSGLKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L +V ++A +YTHPHADH HGI+ LR Y L QK ID+YA ++HL + Sbjct: 61 GPDFRSQMLDMRVSHLNAAIYTHPHADHTHGINDLRSYALAQKCLIDIYANAFTLEHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I+ + + GG I LQ HG I SLGFR N Sbjct: 121 AFGYCFQTPKGSCYSPILKAHLIDE-ESKFTISGQGGEITFNTHLQIHGTIHSLGFRICN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN FP + L L NLD LIIDAL+ H SHFS+ ++L I + PK AILTHM Sbjct: 180 VAYCTDVNQFPEKILPGLMNLDVLIIDALQFKPHPSHFSVDQALYWINYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDYD ++K PS V PA+ G+ F Sbjct: 240 DNSLDYDDIIKYVPSHVEPAYQGLSFEIEA 269 >gi|254464220|ref|ZP_05077631.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] gi|206685128|gb|EDZ45610.1| beta-lactamase domain protein [Rhodobacterales bacterium Y4I] Length = 265 Score = 354 bits (910), Expect = 5e-96, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 156/267 (58%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILG G+S GVPRI G WG CDP NPKNRR R S+ + R G+ T+V++DT PD Sbjct: 3 EMRFTILGSGSSGGVPRIGGHWGDCDPQNPKNRRRRCSMLVERDGPDGT-TSVLIDTTPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +V +DAV+YTH HADH+HGID LR + ++ I VYA L F Sbjct: 62 MRSQLLDAEVSRLDAVVYTHSHADHLHGIDDLRMVYFNMRQRIPVYADGATQNDLLNRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F D+ YPPI++ I P + GG I P HG I +LGFR G +AY Sbjct: 122 YAFAQPDNSPYPPILDLKTIGG---PFTIHGLGGGITFRPFEVSHGSIDALGFRIGGLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+A P +L +L+ LD I+D L+ H +HFS E+L+ E + PK+ I+T+MH+D Sbjct: 179 LPDVSAIPDSALPELEGLDIWILDGLRRTPHPTHFSYQEALEWFEKMAPKHGIITNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +DY V TP + PA+DGM + Sbjct: 239 MDYATVEAETPDHITPAYDGMVIRMEV 265 >gi|149201819|ref|ZP_01878793.1| hypothetical protein RTM1035_04745 [Roseovarius sp. TM1035] gi|149144867|gb|EDM32896.1| hypothetical protein RTM1035_04745 [Roseovarius sp. TM1035] Length = 265 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 118/267 (44%), Positives = 157/267 (58%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 F ILGCG+S GVPR+ G WG CDPTNP+N R R SL I R +E G T V++D+ PD Sbjct: 3 ELRFIILGCGSSGGVPRLGGHWGECDPTNPRNTRRRCSLLIERETE-GGITRVLIDSSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + ++DAV+YTH HADH+HGID LR ++ + V+A D L+ F Sbjct: 62 LRAQLLDAGIGALDAVVYTHSHADHVHGIDDLRMIVFNMRKRLPVWADGDTQNALYSRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F D YPPI++ I+ P ++ AGG I P HG I SLGFR G++AY Sbjct: 122 YAFVQPADSPYPPILDMHTIDG---PFEIEGAGGAIALTPFQVNHGSIDSLGFRVGDLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P + L LD I+DAL+ H +H L+ SL+ I P+ A+LT+MH+D Sbjct: 179 LPDVAAIPEDVWPVLSGLDCWILDALRRTPHPTHAHLALSLEWIARAAPRRAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY V + TP+ V PA+DGM + Sbjct: 239 LDYQTVAEETPAHVTPAYDGMILRYTV 265 >gi|319898930|ref|YP_004159023.1| hypothetical protein BARCL_0764 [Bartonella clarridgeiae 73] gi|319402894|emb|CBI76445.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 273 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 137/270 (50%), Positives = 174/270 (64%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D Y FTILGCG+S GVPR GDWGACDP N KNRR R+SL + R+ + G TTVI+DT Sbjct: 1 MSDRYRFTILGCGSSPGVPRPNGDWGACDPNNSKNRRYRTSLLVERIHKSGMKTTVIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARVSHLNAAIYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I+ ++ GG I LQ HG SLGFR GN Sbjct: 121 AFGYCFQTQKGSHYSPILKENLIDEKSE-FKVQGQGGAITFNTHLQIHGATRSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP ++L L NLD LIID+L+ H SHFS+ ++L IE PK AILTHM Sbjct: 180 VAYCTDVSEFPEKTLSGLMNLDVLIIDSLQFKPHPSHFSVDQALYWIEYFKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DNSLDYNNVVNYVPAHVEPAYQGLIFETDV 269 >gi|182678508|ref|YP_001832654.1| metal-dependent hydrolase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634391|gb|ACB95165.1| metal-dependent hydrolase [Beijerinckia indica subsp. indica ATCC 9039] Length = 265 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 117/261 (44%), Positives = 160/261 (61%), Gaps = 1/261 (0%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 TILGCG+S GVPR+ WGACDP NPKNRR R ++ + + G T ++VD GPD Sbjct: 4 RITILGCGSSGGVPRVGQGWGACDPNNPKNRRRRCAMLLEQTGTDGGTTQILVDMGPDLR 63 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V +DA+L TH HADH HG+D +R + + ID++ + ESF Y Sbjct: 64 EQLLDHNVSHLDAILLTHQHADHTHGMDDIRPLVIMHHKRIDLHMDAATSADVRESFGYI 123 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F YPP++ I + P+ ++ AGGV++ +P +HG I +LGFRFGN AY Sbjct: 124 FATPPGSQYPPLLTEHRIIAGE-PVDIRGAGGVLKTLPFRLEHGEIDALGFRFGNFAYSP 182 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DVNA PAES+ L+NLD I+DAL+ H SHF L E+L I+ + PK AILT++H DLD Sbjct: 183 DVNAIPAESVGFLENLDLWIVDALRYTPHPSHFCLQETLDWIKKLKPKRAILTNLHTDLD 242 Query: 246 YDMVLKSTPSRVVPAFDGMQF 266 ++ + P + PA+DGMQ Sbjct: 243 FERLRSELPPHIEPAYDGMQI 263 >gi|299133886|ref|ZP_07027080.1| hydrolase [Afipia sp. 1NLS2] gi|298591722|gb|EFI51923.1| hydrolase [Afipia sp. 1NLS2] Length = 266 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 111/262 (42%), Positives = 149/262 (56%), Gaps = 2/262 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGCG+S GVPR WGAC+P NPKNRR R S + R+ G T V++DT PD Sbjct: 5 LTILGCGSSAGVPRPALGWGACNPLNPKNRRRRCSAMVERIGANG-ITRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HG+D LR + QKR I Y + + F YCF Sbjct: 64 QLIDANVDHIDAVFLTHEHADQTHGMDDLRSVVMHQKRRIPTYLNQSTANDINQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ +YPPI+ IE + + + GG + +HG I +LG+R GN AY D Sbjct: 124 ESPPGSSYPPILERRSIEAGESEM-IDGKGGPVTLTAFWVEHGSIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L+NLD +ID L+ H SHF + E+L I+ P+ AI+T+MH DLDY Sbjct: 183 LNGIPPESFSTLENLDLWVIDGLRYTPHPSHFCVDEALAWIDRFKPRRAIITNMHADLDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + P+ VVP +DGM+ Sbjct: 243 EELRSKLPAGVVPGYDGMRLQL 264 >gi|146276606|ref|YP_001166765.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145554847|gb|ABP69460.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 265 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 158/267 (59%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 H TILGCG+S GVPR+ G WG CDPT+P+NRR R SL I RV+ G+ T V++DT PD Sbjct: 3 RLHCTILGCGSSGGVPRLGGLWGECDPTDPRNRRRRCSLLIERVTVDGT-TRVLIDTTPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + Q+L V +DAV +TH HADH+HGID LR ++ + V+A D + L F Sbjct: 62 MHPQLLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADADTQQALLTRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + YPPI++ IE P + AGG + P HG +LGFR G +AY Sbjct: 122 YAFAQPEGSLYPPILDLNTIEG---PFEITGAGGTVRLEPFRVSHGPTEALGFRVGALAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P E+ +L+ L+ ++DAL+ H +H L+ +L+ I P+ AILT+MH+D Sbjct: 179 LPDVVAIPEEAWPRLEGLEMWVLDALRRKPHPTHAHLALALEWIARARPRRAILTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + P+ VVPA+DG+ F Sbjct: 239 LDYATLAAELPAHVVPAYDGLTFDLAA 265 >gi|255261312|ref|ZP_05340654.1| beta-lactamase domain protein [Thalassiobium sp. R2A62] gi|255103647|gb|EET46321.1| beta-lactamase domain protein [Thalassiobium sp. R2A62] Length = 265 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 110/266 (41%), Positives = 149/266 (56%), Gaps = 4/266 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WG CDP NPKNRR R S+ + R ++ G+ T V++DT PD Sbjct: 3 ELRLTILGCGSSGGVPRLGGHWGDCDPDNPKNRRRRCSVLVERETDAGT-TRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + ++AV YTH HADH+HGID LR + + V+A L F Sbjct: 62 LRNQLLDAGIGELNAVAYTHGHADHVHGIDDLRMIVFNMRERLPVWADGATQTDLISRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F +YPPI N I + + AGG I P +HG I +LGFR G+VAY Sbjct: 122 YAFVQPAGSSYPPICNLHSITGS---FTISGAGGDITLTPFEVEHGNIDALGFRIGDVAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P + +L+NLD I+D L+ H SH L + + I PK+A+LT+MH+D Sbjct: 179 LPDVSDIPEDVWPQLENLDTWIVDCLRRTPHPSHAHLERTFEWIARAKPKSAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 LDY ++ T + PA+DGM Sbjct: 239 LDYAVLEAETADHITPAYDGMVLRFE 264 >gi|85706304|ref|ZP_01037398.1| hypothetical protein ROS217_15455 [Roseovarius sp. 217] gi|85669077|gb|EAQ23944.1| hypothetical protein ROS217_15455 [Roseovarius sp. 217] Length = 265 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 116/267 (43%), Positives = 156/267 (58%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ G WG CDP NP+N R R S+ I R +E G T V++D+ PD Sbjct: 3 ELRFTILGCGSSGGVPRLGGHWGECDPANPRNTRRRCSMLIERETEDG-ITRVLIDSSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + ++DAV+YTH HADH+HGID LR +R + V+A D L+ F Sbjct: 62 LRAQLLDAGIGALDAVVYTHSHADHVHGIDDLRMIVFNMRRRLPVWADGDTQNALYARFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F +D YPPI++ I+ P ++ AGG I P HG I +LGFR ++AY Sbjct: 122 YAFVQPEDSPYPPILDMHTIDG---PFEIEGAGGAIRLNPFQVNHGSIDALGFRVADLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P + L LD I+DAL+ H +H L+ SL I P+ A+LT+MH+D Sbjct: 179 LPDVAAIPEDVWPVLSGLDCWILDALRRTPHPTHAHLARSLDWIMRAAPRRAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY V + TP+ V PA+DGM + Sbjct: 239 LDYQTVDEETPAHVTPAYDGMILRYTV 265 >gi|328543902|ref|YP_004304011.1| Lipoyltransferase, putative [Polymorphum gilvum SL003B-26A1] gi|326413646|gb|ADZ70709.1| Lipoyltransferase, putative [Polymorphum gilvum SL003B-26A1] Length = 268 Score = 350 bits (900), Expect = 8e-95, Method: Composition-based stats. Identities = 116/270 (42%), Positives = 162/270 (60%), Gaps = 2/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S GVPR+ DWG CDP P+NRR R S+ + R+ G TTV+VDT Sbjct: 1 MSARLEITILGCGSSGGVPRLGNDWGDCDPAEPRNRRLRCSILVRRLGA-GGATTVLVDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L V +DAVLYTH HADH+HGID LR ++ +R + VY + Sbjct: 60 GPDMRQQLLDADVEDLDAVLYTHAHADHLHGIDDLRMLAIRHRRRVPVYMDEKTSRRAHA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF +YPPI++ + + VP + AGG + +PI HG I +LGFRF + Sbjct: 120 AFGYCFATPPGSSYPPILDEVRLTAG-VPAVIDGAGGALSFLPIEVNHGEIDALGFRFED 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV+ P ++ + L I+DAL++ H SHF L+++L I + P+ A+LT+M Sbjct: 179 VAYLPDVSEIPEVAVTQFAGLRLWIVDALRHKPHPSHFCLTDALTWIADLAPRRAVLTNM 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H D+DY +++ P+ V PA DGM P+ Sbjct: 239 HNDMDYAALVRDLPAGVEPAHDGMIIELPL 268 >gi|56697581|ref|YP_167950.1| hypothetical protein SPO2743 [Ruegeria pomeroyi DSS-3] gi|56679318|gb|AAV95984.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 266 Score = 350 bits (900), Expect = 8e-95, Method: Composition-based stats. Identities = 117/270 (43%), Positives = 151/270 (55%), Gaps = 4/270 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D FTILGCG+S GVPR+ G WG CDPTNP+N R R S+ + R S+ G TTV++DT Sbjct: 1 MSDELRFTILGCGSSGGVPRLGGHWGDCDPTNPRNTRRRCSMLVERESDAGV-TTVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L +DAV+YTH HADH+HGID LR + I V+A D L Sbjct: 60 TPDMRSQLLDTGTGRLDAVVYTHSHADHVHGIDDLRMIVFNMRARIPVWADGDTQNALLS 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F D YPPI+ I P + GG I P HG I SLGFR + Sbjct: 120 RFGYAFVQPDGSPYPPILKMKTIAG---PFEVDGPGGPIAFRPFRVGHGSIDSLGFRIHD 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV + +LQ+LD ++DAL+ H +H L +SL I P+ A+LT+M Sbjct: 177 LAYLPDVAEIYDAAWAELQDLDCWVLDALRRTPHPTHAHLDKSLDWIARAAPRRAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H+DLD+D V TP + PA+DGM + Sbjct: 237 HIDLDHDTVAAETPDHITPAYDGMVIRYAL 266 >gi|92117536|ref|YP_577265.1| hypothetical protein Nham_2006 [Nitrobacter hamburgensis X14] gi|91800430|gb|ABE62805.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 267 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 157/265 (59%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGCG+S GVPR WGACDP NPKNRR R SL + R SE+G+ T V++DT PD Sbjct: 2 TVTLTVLGCGSSAGVPRPALGWGACDPKNPKNRRRRCSLMVERTSEQGT-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V IDAV TH HAD HGID LR L Q R I VY + + F Sbjct: 61 LREQLIDANVDHIDAVFLTHEHADQTHGIDDLRSVVLYQHRRIPVYLNRSTAADVMQRFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF++ + YPPI+ IE + I + GG + L QHG I +LG+R GN AY Sbjct: 121 YCFESPEGSFYPPILEQRAIEAGESQI-IDGKGGALTLSAFLVQHGSIPALGYRIGNAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D++ P ES L+NLD I+D L+ H SHFS++++L I+ PK A++T+MH D Sbjct: 180 TPDLHDIPHESWPALENLDLWIVDGLRYKQHPSHFSVADALSWIDRFKPKRAVITNMHSD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ + P+ VVPA+DGM+ Sbjct: 240 LDYETLRHELPANVVPAYDGMRLEI 264 >gi|83949595|ref|ZP_00958328.1| hypothetical protein ISM_00835 [Roseovarius nubinhibens ISM] gi|83837494|gb|EAP76790.1| hypothetical protein ISM_00835 [Roseovarius nubinhibens ISM] Length = 269 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 113/262 (43%), Positives = 147/262 (56%), Gaps = 4/262 (1%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 FTILG G+S GVPR+ G WG CDP NP+N R R SL I + G T V+VDT PD Sbjct: 9 RFTILGSGSSGGVPRLGGLWGDCDPENPRNHRRRCSLLIEQEGPEGM-TRVLVDTSPDLR 67 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V +DAV+YTH HADH+HG+D LR + +DV+A D L F Y Sbjct: 68 SQLLDAGVGHLDAVVYTHSHADHVHGLDDLRMVVFNRGARLDVWADGDTQNALLARFGYA 127 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F YPPI+N I+ I + AGG I P HG I +LGFR G +AY Sbjct: 128 FVQPKGSPYPPILNLCAIDG---DIAVDGAGGTITLTPFEVAHGGIDALGFRIGALAYLP 184 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+ P E+ L+ LD I+DAL+ H +H L+ SL+ + PK +LT+MHVD+D Sbjct: 185 DVSEIPEEAWPLLEGLDVWILDALRRTPHPTHAHLARSLEWMHRARPKQGVLTNMHVDMD 244 Query: 246 YDMVLKSTPSRVVPAFDGMQFS 267 Y + P + PA+DGM + Sbjct: 245 YATLCDELPDWIRPAYDGMVLT 266 >gi|114704623|ref|ZP_01437531.1| probable hydrolase [Fulvimarina pelagi HTCC2506] gi|114539408|gb|EAU42528.1| probable hydrolase [Fulvimarina pelagi HTCC2506] Length = 275 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILGC +S GVPRI+GDWG CDP NPKNRRTR++ I RVS G T V +D GPD Sbjct: 9 WLRLTILGCSSSPGVPRISGDWGNCDPANPKNRRTRTAALIERVSPTG-ITRVAIDCGPD 67 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q+L V +DA++ TH HADHIHGID +RG+ Q + I V+ D + + E+F Sbjct: 68 FRQQMLSATVDRLDAIILTHAHADHIHGIDDIRGFTQLQGKRIPVFGDVDTLARVKEAFG 127 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y FK YPP+ VI+ + GG + +P+ Q HG I+SL FRFG++AY Sbjct: 128 YIFKTPRGSFYPPVGEAQVIDAGRA-FAIDGPGGALRILPLTQNHGSITSLAFRFGSLAY 186 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV+ P E+ +LQ+LD L++ AL+ H SHFSL ++L IE + PK + LTHMH Sbjct: 187 CTDVSDIPPETEARLQDLDHLVLGALQYRTHPSHFSLDQALGWIERLAPKASTLTHMHTP 246 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V + TP V P +DG+ P+ Sbjct: 247 LDYETVQRETPDHVEPGYDGLVIEVPL 273 >gi|148255485|ref|YP_001240070.1| hypothetical protein BBta_4098 [Bradyrhizobium sp. BTAi1] gi|146407658|gb|ABQ36164.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 265 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 118/265 (44%), Positives = 155/265 (58%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDP NPKNRR R SL R + G T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPALGWGACDPNNPKNRRRRCSLLAERRAAHGV-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ QV IDAV TH HAD HGID LR + Q+R I VY K + F Sbjct: 61 LREQLIDTQVDHIDAVFLTHEHADQTHGIDDLRSVVMHQRRRIPVYLNQSTAKDIMHRFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF + YPPI+ IE + ++ GG ++ L QHG I +LG+R GN AY Sbjct: 121 YCFVSPPGSDYPPILTQHAIEAGETQ-AVEGKGGELKLTAFLVQHGNIPALGYRIGNAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N P ES L++LD I+D L+ H SHFS++++L IE P+ A++T+M D Sbjct: 180 TPDLNDIPEESWGALEDLDVWIVDGLRPASHPSHFSVNDALAWIERFKPRRAVITNMTAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+++ +S P VVPA+DGM+ Sbjct: 240 LDYEVLRQSLPDGVVPAYDGMRLEV 264 >gi|221640132|ref|YP_002526394.1| PhnP-like protein [Rhodobacter sphaeroides KD131] gi|221160913|gb|ACM01893.1| PhnP-like protein [Rhodobacter sphaeroides KD131] Length = 265 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 150/267 (56%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WGACDP PKNRR R SL + R++E G T V++DT PD Sbjct: 3 RLRCTILGCGSSGGVPRLGGLWGACDPAEPKNRRRRCSLLVERIAE-GGTTRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + Q+L V +DAV +TH HADH+HGID LR ++ + V+A P L F Sbjct: 62 MHPQLLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADPVTQDSLLTRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI++ IE P ++ AGG I P HG +LGFR +AY Sbjct: 122 YAFAQPAGSLYPPILDLNTIEG---PFEVEGAGGTIRLQPFQVSHGPTEALGFRVDGMAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P E+ L+ L+ ++D L+ H +H L+ +L I P+ AILT+MH+D Sbjct: 179 LPDVVAIPEEAWSHLEGLEMWVLDTLRRKPHPTHAHLALALDWIARARPERAILTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + P +VPA+DG+ F Sbjct: 239 LDYATLAAELPPHIVPAYDGLTFDLTA 265 >gi|99078565|ref|YP_611823.1| beta-lactamase-like [Ruegeria sp. TM1040] gi|99035703|gb|ABF62561.1| beta-lactamase-like protein [Ruegeria sp. TM1040] Length = 265 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 155/265 (58%), Gaps = 4/265 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WG CDP NPKN R R S+ + + G+ TTV++DT PD Sbjct: 3 TLRCTILGCGSSGGVPRLGGHWGDCDPKNPKNTRRRCSMLVEQDGPDGT-TTVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAV+YTHPHADH+HGID LR + I VYA L + F Sbjct: 62 MRSQLLDAGVGRLDAVVYTHPHADHVHGIDDLRMVVFNMRERIPVYADAPTKADLLDRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + +YPPI+ IE + AGG I +P L +HG I +LGFR G++AY Sbjct: 122 YAFIQPEGSSYPPILEMRDIEGA---FTISGAGGSIPFLPFLVEHGAIDALGFRIGDLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P + L+ L+ IIDAL+ H +HFS ++L I+ + P A+LT+MH+D Sbjct: 179 LPDVAKIPEPVVPVLEGLECWIIDALRRTPHPTHFSYQDALSWIDRMQPARAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDYD V TP + PAFDGM S Sbjct: 239 LDYDTVEAETPDHITPAFDGMVIHS 263 >gi|75675652|ref|YP_318073.1| hypothetical protein Nwi_1460 [Nitrobacter winogradskyi Nb-255] gi|74420522|gb|ABA04721.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 267 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 114/265 (43%), Positives = 158/265 (59%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDP NPKNRR R SL R SE G+ T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPAMGWGACDPANPKNRRRRCSLMAERTSEEGT-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V IDAV +H HAD HGID LR L Q R I VY + + F Sbjct: 61 LREQLIDANVDHIDAVFLSHEHADQTHGIDDLRSVVLHQGRRIPVYLNKSTAVDVMQRFA 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ + YPPI+ IE + + +GG + L +HG+I++LG+R G+ AY Sbjct: 121 YCFETPEGSFYPPILEQRSIEAGESR-TINGSGGALTLSAFLVRHGQITALGYRIGDAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+ P ES L+NLD I+DAL+ H +HFS++++L I+ P+ A++T+MH D Sbjct: 180 TPDLCDIPPESWPALKNLDLWIVDALRYAQHPTHFSVADALSWIDRFKPRRAVITNMHSD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+++ + P+ V PA+DGM+ + Sbjct: 240 LDYEILRRELPTNVTPAYDGMRLTI 264 >gi|307942271|ref|ZP_07657622.1| metal-dependent hydrolase [Roseibium sp. TrichSKD4] gi|307774557|gb|EFO33767.1| metal-dependent hydrolase [Roseibium sp. TrichSKD4] Length = 266 Score = 349 bits (895), Expect = 3e-94, Method: Composition-based stats. Identities = 118/266 (44%), Positives = 163/266 (61%), Gaps = 2/266 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S GVPRI DWG CD PKNRR R S+ + + G+ T V++DT Sbjct: 1 MSRPLEVTILGCGSSGGVPRIGNDWGQCDSNEPKNRRLRCSILVEQRGPNGA-TQVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L + +DAVLYTH HADH+HGID LR + ++ ++ + VY + E Sbjct: 60 GPDLRQQMLNANIQDLDAVLYTHAHADHLHGIDDLRVFTIRNRKRMPVYMDAVTTQRAHE 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCFK + +YPPI++ ++E + AGG I +PI HG I +L FRF Sbjct: 120 AFGYCFKQPEGSSYPPILDHHMLEAGR-NCEIDGAGGTISFLPITVHHGDIDALAFRFNG 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y DV+ ++++ L +LD LIIDAL+ H SHFSL ++L IE + P A+LT+M Sbjct: 179 IGYMPDVSDLSSDAIHSLSDLDTLIIDALRRTPHPSHFSLDDALGWIEKLRPIKAVLTNM 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 HVD+DY +L P V+PAFDGM+ Sbjct: 239 HVDMDYQSLLSELPDGVIPAFDGMKL 264 >gi|222086008|ref|YP_002544540.1| metal-dependent hydrolase protein [Agrobacterium radiobacter K84] gi|221723456|gb|ACM26612.1| metal-dependent hydrolase protein [Agrobacterium radiobacter K84] Length = 258 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 136/252 (53%), Positives = 171/252 (67%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDA 78 PRITGDWGACDP N KNRRTRS+ + +++ G TTV++DTGPDF Q++R V SI+A Sbjct: 2 PRITGDWGACDPKNSKNRRTRSAFMVEQIAPDGGVTTVVIDTGPDFREQMIRAGVGSIEA 61 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 VLYTH HADHIHG+D LRG+F I +YA M + E F YC + +YPPIV Sbjct: 62 VLYTHAHADHIHGLDDLRGFFHNSHERIPIYADQPTMDRIREGFGYCLETPPGSSYPPIV 121 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 P++IE+ D ++ GG I P QQHG I SLGFR G +AYC+D++ FPAES+EK+ Sbjct: 122 RPVIIESLDKSFTVEGPGGPISFWPHKQQHGDIHSLGFRIGKLAYCSDISDFPAESVEKV 181 Query: 199 QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 QNLD LIIDAL+ H SH SL +SL IE + PK+AILTHMH LDY+ VL TP V Sbjct: 182 QNLDILIIDALQYRPHPSHLSLEQSLAWIERLQPKHAILTHMHTPLDYETVLAETPEHVE 241 Query: 259 PAFDGMQFSSPI 270 PA+D M+ + Sbjct: 242 PAYDQMRIELDV 253 >gi|312115061|ref|YP_004012657.1| metal-dependent hydrolase [Rhodomicrobium vannielii ATCC 17100] gi|311220190|gb|ADP71558.1| metal-dependent hydrolase [Rhodomicrobium vannielii ATCC 17100] Length = 266 Score = 348 bits (893), Expect = 5e-94, Method: Composition-based stats. Identities = 123/265 (46%), Positives = 161/265 (60%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ DWGAC+P NPKNRR RSSL + R+ E G T ++DT PD Sbjct: 2 TLRFTILGCGSSTGVPRVGNDWGACNPANPKNRRRRSSLLVERIGESG-RTVALIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +Q+L V +D V+YTH HADH HGID LR Q+R ID++ + L + F Sbjct: 61 MRVQLLDADVKQLDGVVYTHDHADHTHGIDDLRMLSYLQRRRIDLWGDERTIALLRQRFD 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ +YP IV VIEN+ P+ + GG I P Q HG I SLGFR G +AY Sbjct: 121 YCFETPPGSSYPAIVEGHVIENH-APVTIDGPGGPIVFQPFRQIHGEIDSLGFRVGGLAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N PAES L++LD I++ L+ H SH +L ++L I + PK A+LTH+H+D Sbjct: 180 SCDLNDLPAESRPILRDLDVWILNTLRYTPHPSHLTLEKALAFIAEMKPKRALLTHLHID 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDYD + P+ V P+ DGM Sbjct: 240 LDYDDLASRLPAHVEPSVDGMVLEL 264 >gi|254439871|ref|ZP_05053365.1| hypothetical protein OA307_4741 [Octadecabacter antarcticus 307] gi|198255317|gb|EDY79631.1| hypothetical protein OA307_4741 [Octadecabacter antarcticus 307] Length = 264 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 111/265 (41%), Positives = 153/265 (57%), Gaps = 4/265 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG+S GVPR+ G WGACDP NPKN R R SL ++R + G T V++DT PD Sbjct: 2 TIALRILGCGSSGGVPRLGGHWGACDPANPKNNRKRCSLLVTRTTPSGV-TRVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAV+YTH HADH+HG+D +R ++ + V+A D L F Sbjct: 61 LRQQLLDANVGELDAVIYTHAHADHVHGLDDIRMIVYNMRQRLQVWADGDTGNQLLARFG 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI + I+ + + AGG I P +HG I +LGFR N AY Sbjct: 121 YAFVQPKGSNYPPICDLNTIDG---DVTIDGAGGPITFTPFEVEHGSIDALGFRINNAAY 177 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P + L+NLD I+DAL+ H +H L+++L+ I+L+ PK A+LT+MH+D Sbjct: 178 LPDVSDIPHDVWPLLENLDLWIVDALRRDPHPTHAHLAKTLEWIDLVQPKQAVLTNMHID 237 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + T + PA+DGM + Sbjct: 238 LDYATLEAETAENIQPAYDGMTLTI 262 >gi|77464248|ref|YP_353752.1| PhnP-like protein [Rhodobacter sphaeroides 2.4.1] gi|126463090|ref|YP_001044204.1| PhnP-like protein [Rhodobacter sphaeroides ATCC 17029] gi|77388666|gb|ABA79851.1| PhnP-like protein [Rhodobacter sphaeroides 2.4.1] gi|126104754|gb|ABN77432.1| PhnP-like protein [Rhodobacter sphaeroides ATCC 17029] Length = 265 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 150/267 (56%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WGACDP PKNRR R SL + R++E G T V++DT PD Sbjct: 3 RLRCTILGCGSSGGVPRLGGLWGACDPAEPKNRRRRCSLLVERIAE-GGTTRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + Q+L V +DAV +TH HADH+HGID LR ++ + V+A P L F Sbjct: 62 MHPQLLDAGVGELDAVAWTHAHADHVHGIDDLRQIVFNMQKRLPVWADPVTQDALLTRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI++ IE P ++ AGG I P HG +LGFR +AY Sbjct: 122 YAFAQPAGSLYPPILDLNTIEG---PFEVEGAGGTIRLQPFQVSHGPTEALGFRVDGMAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P E+ L+ L+ ++D L+ H +H L+ +L I P+ AILT+MH+D Sbjct: 179 LPDVVAIPEEAWLHLEGLEMWVLDTLRRKPHPTHAHLALALDWIARARPERAILTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + P +VPA+DG+ F Sbjct: 239 LDYATLAAELPPHIVPAYDGLTFDLAA 265 >gi|254489010|ref|ZP_05102215.1| beta-lactamase domain protein [Roseobacter sp. GAI101] gi|214045879|gb|EEB86517.1| beta-lactamase domain protein [Roseobacter sp. GAI101] Length = 266 Score = 347 bits (892), Expect = 7e-94, Method: Composition-based stats. Identities = 111/270 (41%), Positives = 159/270 (58%), Gaps = 4/270 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT Sbjct: 1 MMAEMKITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITKDGT-TSVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L V +DAVLYTH HADH+HGID LR + ++ + V+A L + Sbjct: 60 SPDMRSQLLDAGVSRLDAVLYTHSHADHVHGIDDLRMIVISMRKRLQVWADAPTTAALLD 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + +YPPI++ IE + + GG + P L HG + +LGFR + Sbjct: 120 RFSYVFVQPEGSSYPPILDLNPIEG---DVTIDGPGGALTFTPFLVNHGGMDALGFRVND 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY DV P L+NL I+DAL+ H +H L+++L I+ + P+ A+LT+M Sbjct: 177 VAYLPDVATIPDPVWPHLENLRCWIVDALRRDPHPTHSHLAQTLNWIKAMAPETAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H DLDY+ + TP + PA+DG+ + P Sbjct: 237 HNDLDYETLADETPDHIQPAYDGLTLTFPA 266 >gi|114798446|ref|YP_760514.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] gi|114738620|gb|ABI76745.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] Length = 267 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 118/269 (43%), Positives = 160/269 (59%), Gaps = 3/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D +LG G+S GVPR+ GDWGACDP PKNRR R + R + T +++DT Sbjct: 1 MSDA-RIILLGTGSSGGVPRVGGDWGACDPAEPKNRRRRCCALVQRFGAGDALTNILIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L +V+ +DAV+YTH HAD HGID +R ++Q+R I VY P L Sbjct: 60 SPDLREQLLEAEVMHLDAVIYTHDHADQSHGIDDVRALAIRQRRAIPVYFDPYARNSLMT 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F YCF + + YP I++P N + AGG +E +P+ HG I G+R GN Sbjct: 120 RFEYCF--IGGKGYPAILSPHTTVNEGQAFSVTGAGGTVEFLPVSMIHGPIPCTGYRIGN 177 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYC DVN PA +L +L LD LIIDAL++ H SH L +L+ I+ + PK A+LT++ Sbjct: 178 VAYCNDVNELPATALRQLGGLDVLIIDALRHTPHPSHAHLELALEWIKELRPKRAVLTNL 237 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 HVD+DY + ++ P+ V P FDGM S Sbjct: 238 HVDMDYQTLRRTLPANVEPGFDGMTISIE 266 >gi|118589863|ref|ZP_01547267.1| hypothetical protein SIAM614_14400 [Stappia aggregata IAM 12614] gi|118437360|gb|EAV43997.1| hypothetical protein SIAM614_14400 [Stappia aggregata IAM 12614] Length = 280 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 157/267 (58%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ DWG CDPT PKNRR R +L + + + TTV++D+GPD Sbjct: 2 TLTLTILGCGSSGGVPRVGNDWGDCDPTEPKNRRGRCALLVEKRVDN-KCTTVLIDSGPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAVLYTH HADH+HGID LR ++++ + + VY +F Sbjct: 61 IRSQLLVANVEHLDAVLYTHSHADHLHGIDDLRAFWVQSGKRVPVYMDDATAARALTAFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YPPI+ ++ P+ + GG I P HG I++LGFR G+ AY Sbjct: 121 YCFETPPGSNYPPILERHDLQPG-TPVTINGDGGAITFEPFEVVHGEINALGFRIGDTAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P SL +L++LD LI+D L+ H SHF L+E+L I P A+ T++H D Sbjct: 180 IPDVSDIPENSLNQLKDLDILILDCLRRRPHPSHFCLAEALTWTRKIAPARAVFTNLHND 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY ++ P + PA+DGM ++ I Sbjct: 240 LDYHVLSAELPETIEPAYDGMILTAEI 266 >gi|259415181|ref|ZP_05739103.1| beta-lactamase domain protein [Silicibacter sp. TrichCH4B] gi|259349091|gb|EEW60845.1| beta-lactamase domain protein [Silicibacter sp. TrichCH4B] Length = 265 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 115/265 (43%), Positives = 153/265 (57%), Gaps = 4/265 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WG CDP NPKN R R S+ + + G+ TTV++DT PD Sbjct: 3 ELRCTILGCGSSGGVPRLGGHWGDCDPENPKNSRRRCSMLVQQDGPEGT-TTVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + +DAV+YTH HADH+HG+D LR + I VYA L + F Sbjct: 62 MRSQLLDAGIGRLDAVVYTHAHADHVHGLDDLRMVVFNMRERIPVYADVPTKTDLLDRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + +YPPI+ I+ + AGG I IP L HG I +LGFR G++AY Sbjct: 122 YAFIQPEGSSYPPILEMRDIDGA---FEISGAGGSIPFIPFLVNHGGIDALGFRIGDLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P + L+ LD +ID+L+ H +HFS E+L I+ + P A+LT+MH+D Sbjct: 179 LPDVAKIPEHVVPVLEGLDCWVIDSLRRTPHPTHFSYQEALAWIDRMQPARAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DYD V TP + PAFDGM S Sbjct: 239 MDYDTVEAETPDHITPAFDGMVIHS 263 >gi|163746824|ref|ZP_02154181.1| beta-lactamase-like protein [Oceanibulbus indolifex HEL-45] gi|161379938|gb|EDQ04350.1| beta-lactamase-like protein [Oceanibulbus indolifex HEL-45] Length = 275 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 110/271 (40%), Positives = 159/271 (58%), Gaps = 5/271 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILG G+S GVPRI G WGACDPT PKN R R S+ + RV++ G+ TTV++DT Sbjct: 7 MAD-LRVTILGSGSSGGVPRIGGHWGACDPTEPKNARRRCSILVERVTDAGT-TTVLIDT 64 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L + +DAV+YTH HADH+HG+D LR + + + V+A L E Sbjct: 65 SPDMRSQLLDAGIGRLDAVIYTHAHADHVHGLDDLRMVVMNMRARLPVWADATTRDALIE 124 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + +YPPI++ I + + GG ++ P HG I +LGFRF + Sbjct: 125 RFGYAFVQPEWSSYPPILDMHDITGE---VSIDGPGGTLKFTPFTVAHGNIDALGFRFDD 181 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y DV+A P E + +L I+DAL+ H +H L+++L+ I+ + P+ A+LT++ Sbjct: 182 IVYLPDVSAIPDECWPLMDDLRCWIVDALRRDPHPTHSHLAQTLEWIDRVQPETAVLTNL 241 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 H DLDY + T V PA+DG+ P+P Sbjct: 242 HNDLDYQTLAAETADHVQPAYDGLTLHFPLP 272 >gi|254511764|ref|ZP_05123831.1| beta-lactamase domain protein [Rhodobacteraceae bacterium KLH11] gi|221535475|gb|EEE38463.1| beta-lactamase domain protein [Rhodobacteraceae bacterium KLH11] Length = 265 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 116/268 (43%), Positives = 150/268 (55%), Gaps = 4/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILGCG+S GVPR+ G WGACDP +P+N R R SL + R G+ T+V++DT P Sbjct: 2 SELRLTILGCGSSGGVPRLGGHWGACDPDDPRNARRRCSLLVERDGPEGT-TSVLIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L +D V+YTH HADH +GID LR K + V+A D L F Sbjct: 61 DMRSQLLGSGTGRLDGVVYTHSHADHTNGIDDLRMIVFNMKTRVPVWADGDTQNDLLSRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ I P + GG I P HG I +LGFR GN Sbjct: 121 GYAFVQPEGSPYPPILDLKTIRG---PFEISGPGGAIPFRPFRVNHGAIDALGFRMGNAV 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV ES+ +L +LD LIIDAL+ H +H L ++L I+ +NPK A+LT+MH+ Sbjct: 178 YLPDVAELYDESMVELADLDCLIIDALRRSPHPTHAHLEKTLGWIDQLNPKRAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY V TP + PAFDGM P+ Sbjct: 238 DLDYAEVEAETPDHITPAFDGMVIRQPL 265 >gi|298291758|ref|YP_003693697.1| metal-dependent hydrolase [Starkeya novella DSM 506] gi|296928269|gb|ADH89078.1| metal-dependent hydrolase [Starkeya novella DSM 506] Length = 266 Score = 344 bits (883), Expect = 7e-93, Method: Composition-based stats. Identities = 120/265 (45%), Positives = 164/265 (61%), Gaps = 2/265 (0%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDTGPD 63 + FTILGCG+S GVPR+ WGACDP P+NRR R S+ + R + G T V++DT PD Sbjct: 3 FTFTILGCGSSGGVPRVGQGWGACDPKEPRNRRRRCSMLVERFEDGGDKPTRVLIDTSPD 62 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ +V +DAVL+TH HADH HGID LR + +R IDV+ + L F Sbjct: 63 LREQLIDAEVDRLDAVLFTHEHADHTHGIDDLRPLTIMHRRRIDVHLDAETSALLHTRFG 122 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YPPI+N + D I + G IEA Q HG I S GFR G++AY Sbjct: 123 YCFETPPGSDYPPILNEHRFQAGDT-IRVNGPAGPIEAQAFRQYHGSIISYGFRIGDLAY 181 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +D++ PAESL L++LD I+DAL+ H +HFSLSE+L IE + P+ A+LT++H D Sbjct: 182 SSDLHDLPAESLPYLEDLDVWIVDALRITPHPTHFSLSEALAWIERMKPRRAVLTNLHTD 241 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDYD +++ P V A+DGM+ + Sbjct: 242 LDYDRLMRDLPEGVTAAYDGMKITL 266 >gi|83943048|ref|ZP_00955508.1| hypothetical protein EE36_12743 [Sulfitobacter sp. EE-36] gi|83846056|gb|EAP83933.1| hypothetical protein EE36_12743 [Sulfitobacter sp. EE-36] Length = 265 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 158/267 (59%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT PD Sbjct: 3 EMKITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITDAGT-TSVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAVLYTH HADH+HG+D LR + ++ + V+A + L + F Sbjct: 62 MRSQLLDAGVGRLDAVLYTHSHADHVHGLDDLRMIVINMRQRLPVWADTPTREALLDRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F +YPPI+ I+ + + GG + P L HG + +LGFR +VAY Sbjct: 122 YVFIQPPGSSYPPILEMNHIDG---DVTIDGPGGTLCFTPFLVNHGGMDALGFRVNDVAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P + L+ L I+DAL+ H +H L+++L IE + P+ A+LT+MH D Sbjct: 179 LPDVAQIPDDIWPHLKGLRCWIVDALRRDPHPTHSHLAQTLDWIEQMAPQTAVLTNMHND 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDYD + TP + PAFDGM S P+ Sbjct: 239 LDYDTLAAETPDHIEPAFDGMTLSFPV 265 >gi|85715529|ref|ZP_01046510.1| hypothetical protein NB311A_17529 [Nitrobacter sp. Nb-311A] gi|85697724|gb|EAQ35600.1| hypothetical protein NB311A_17529 [Nitrobacter sp. Nb-311A] Length = 267 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 114/265 (43%), Positives = 154/265 (58%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDP NPKNRR R SL R S+ G T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPAMGWGACDPKNPKNRRRRCSLMAERASKEGM-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V IDAV +H HAD HGID LR L Q+R I VY + + F Sbjct: 61 LREQLIDANVDHIDAVFLSHEHADQTHGIDDLRSVVLHQRRRIPVYLNKSTAVDVMQRFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF + YPPI+ IE + + +GG + L QHG+I++LG+R G+ AY Sbjct: 121 YCFVTPEGSYYPPILEQRSIEAGESR-TIDGSGGALTLSAFLVQHGQITALGYRIGDAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+ P ES L+NLD IID L+ H +HFS++++L I+ P A++T+MH D Sbjct: 180 TPDLCDIPPESWPALENLDLWIIDGLRYEQHPTHFSVADALSWIDRFKPARAVITNMHSD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+++ P V+PA+DGM+ + Sbjct: 240 LDYEILRHELPENVMPAYDGMRLTI 264 >gi|260575558|ref|ZP_05843556.1| beta-lactamase domain-containing protein [Rhodobacter sp. SW2] gi|259022201|gb|EEW25499.1| beta-lactamase domain-containing protein [Rhodobacter sp. SW2] Length = 269 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 113/273 (41%), Positives = 155/273 (56%), Gaps = 7/273 (2%) Query: 1 MKDYYH---FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI 57 M + TILGCG+S GVPR+ GDWGACDPTNPKN R R SL + ++ +G+ T V+ Sbjct: 1 MSAQFQGLRATILGCGSSGGVPRLGGDWGACDPTNPKNHRRRCSLLLEQIGPQGT-TRVL 59 Query: 58 VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 +DT PD Q+L V ++D V+YTH HADH+HGID LR +R +DV+A Sbjct: 60 IDTSPDMRAQLLDAGVGALDGVVYTHSHADHMHGIDDLRQIVFNLRRRLDVWADAPTRAE 119 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L E F Y F + YPPI++ +I+ PI + AGG + P + HG I +LGFR Sbjct: 120 LLERFGYAFVQPEGSPYPPILDLHLIDG---PITVGGAGGDMVLQPFVADHGSIDALGFR 176 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 G +AY D P ES L L ++DAL+ H +H L+ +L+ I P A++ Sbjct: 177 VGGLAYLPDAVRIPEESWPLLDGLQVWVVDALRYKPHPTHAHLALTLEWIGRAKPARAVI 236 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 T+MH+DLD+ + P + PA DGM P Sbjct: 237 TNMHIDLDFARLEADLPPHIRPAHDGMVIELPA 269 >gi|84499970|ref|ZP_00998236.1| hypothetical protein OB2597_08519 [Oceanicola batsensis HTCC2597] gi|84391904|gb|EAQ04172.1| hypothetical protein OB2597_08519 [Oceanicola batsensis HTCC2597] Length = 265 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 111/268 (41%), Positives = 155/268 (57%), Gaps = 4/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPR+ G WGACDP +P+N R R +L + + + G T V++DTGP Sbjct: 2 GELRFTILGCGSSGGVPRLGGHWGACDPADPRNTRRRCALLVEQEQDSG-ITRVLIDTGP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L V ++DAV+YTH HADH+HG+D LR ++ + V+A D L + F Sbjct: 61 DMRSQLLDAGVGTLDAVVYTHAHADHVHGLDDLRMIVFNMRQRLTVWADGDTQTALLDRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI+ I+ P + AGG + P HG I +LGFR + A Sbjct: 121 AYAFVQPEGSPYPPILRMKTIDG---PFVIDGAGGPVTFTPFRVNHGSIDALGFRIRDFA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV E+ E +Q+LD ++D+L+ H +H L +SL I +P+ A+LT+MH+ Sbjct: 178 YLPDVADMSNEAWEAVQDLDCWVLDSLRRDPHPTHSHLEQSLDWIARADPRRAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY V TP+ + PA DGMQ I Sbjct: 238 DLDYATVDGETPAHIRPAHDGMQIVYAI 265 >gi|254460835|ref|ZP_05074251.1| beta-lactamase domain protein [Rhodobacterales bacterium HTCC2083] gi|206677424|gb|EDZ41911.1| beta-lactamase domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 265 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 118/267 (44%), Positives = 151/267 (56%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ G WG CDP NPKN R R SL I R++E G T V++DT PD Sbjct: 3 ELRFTILGCGSSGGVPRLGGHWGDCDPENPKNARRRCSLLIERIAE-GGVTRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + ++DAV YTH HADH+HGID LR + + V+A L F Sbjct: 62 LRTQLLDAGIGTLDAVAYTHSHADHVHGIDDLRMIVFNMRARLPVWADGATQNDLLSRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI++ IE ++ AGG I P +HG I +LGFR G +AY Sbjct: 122 YAFVQPKGSAYPPILDLFTIEGA---FTIEGAGGPITLHPFEIEHGTIDALGFRVGPLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ E+ L+ D I+DAL+ H SH L SL+ I A+LT+MH+D Sbjct: 179 LPDVSDMTDEAWIALEGADCWILDALRRTPHPSHSHLENSLEWITKSAVPRAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ VL TP + PAFDGMQ S + Sbjct: 239 LDYETVLNETPDYITPAFDGMQISYDV 265 >gi|126726752|ref|ZP_01742592.1| beta-lactamase-like protein [Rhodobacterales bacterium HTCC2150] gi|126704081|gb|EBA03174.1| beta-lactamase-like protein [Rhodobacterales bacterium HTCC2150] Length = 265 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 110/266 (41%), Positives = 152/266 (57%), Gaps = 4/266 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR+ G WGACDPT+PKNRRTR S+ + R T V++DT PD Sbjct: 4 LRFTILGCGSSGGVPRLGGLWGACDPTDPKNRRTRCSMLVERFDGD-DVTRVLIDTSPDM 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V ++D V++TH HADH HGID LR + ++ + V+A L F Y Sbjct: 63 RQQLLNANVGALDGVVFTHQHADHTHGIDDLRMIVINMRQRLSVWANEATKSDLMSRFSY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F +YPPI+ IE P+ + AGG I+ P HG I++LGFR ++AY Sbjct: 123 AFVQPVGSSYPPILEMNDIEG---PVVINGAGGDIKLSPFEVVHGNINALGFRIADLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV+ P + + L +L ++D L+ H SH L +SLK IE PK A+LT++H+DL Sbjct: 180 PDVSDIPPPAWDHLNDLKCWVLDCLRYTPHPSHTHLEQSLKWIERAAPKQAVLTNLHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPI 270 D+ + T + AFDGM + Sbjct: 240 DHKTLTGETNENIAAAFDGMTIEFEV 265 >gi|27379625|ref|NP_771154.1| hypothetical protein bll4514 [Bradyrhizobium japonicum USDA 110] gi|27352777|dbj|BAC49779.1| bll4514 [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 116/265 (43%), Positives = 156/265 (58%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDP+NPKNRR R SL + R SE G+ T +++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPALGWGACDPSNPKNRRRRCSLLVERTSEHGT-TRIVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V IDAV TH HAD HG+D LR + +R I Y K + F Sbjct: 61 LREQLLSTNVDHIDAVFLTHEHADQTHGMDDLRSVVMHMRRRIPTYFNQSTAKDILSRFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF A + YPPI+ IE + + GG + L QHG I +LG+R G+ AY Sbjct: 121 YCFIAPEGSDYPPILTRHSIEAGESQ-TVLGKGGAVTMTAFLVQHGNIPALGYRIGDAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N P ES L+NLD I+D L+ H SHFS++++L IE PK A++T+M D Sbjct: 180 TPDLNDIPRESWGALENLDLWIVDGLRYTSHVSHFSINDALSWIERFKPKRAVITNMTAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY+++ +S P VVPA+DG++ + Sbjct: 240 VDYEVIRQSLPPGVVPAYDGLRLET 264 >gi|319404212|emb|CBI77805.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 270 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 133/270 (49%), Positives = 170/270 (62%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M Y FTILGCG+S GVPR G WGACD N KN+R R+SL + R+ + G TT I+DT Sbjct: 1 MCHRYRFTILGCGSSPGVPRPNGYWGACDSNNSKNKRYRTSLLVERIHKLGMKTTAIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARVSHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I ++ GG I LQ HG SLGFR GN Sbjct: 121 AFGYCFQTPKGSHYLPILKENLICEKSE-FRIQGEGGDIILKAHLQIHGATHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDV+ FP E+L L NLD LIIDAL+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 180 VAYCTDVSEFPEETLSGLMNLDVLIIDALQFKPHPSHFSVDQALYWIKYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DNSLDYNDVVNYVPAHVEPAYQGLTFETNV 269 >gi|126739765|ref|ZP_01755456.1| hypothetical protein RSK20926_13794 [Roseobacter sp. SK209-2-6] gi|126718997|gb|EBA15708.1| hypothetical protein RSK20926_13794 [Roseobacter sp. SK209-2-6] Length = 265 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 112/267 (41%), Positives = 151/267 (56%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +TILGCG+S GVPR+ G WG CDP NP+NRR R S+ + R G+ T+V++DT PD Sbjct: 3 ELRYTILGCGSSGGVPRLGGLWGDCDPQNPRNRRRRCSMLVEREGPEGT-TSVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +D V+YTH HADH+HGID LR + + VYA D L F Sbjct: 62 MRDQLLDSGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARVPVYADGDTQNALLSRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + YPPI++ I+ + GG I P HG I +LGFR G +AY Sbjct: 122 YAFVQPEGSPYPPILDLRSIDGA---FAINGPGGEIPFQPFEVNHGSIDALGFRMGGLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P +L L+ LD +IDAL+ H +HF L E+L+ IE + P+ A+LT+MH D Sbjct: 179 LPDVVKIPDAALPMLEGLDCWVIDALRRNPHPTHFCLKEALEWIERMKPRRAVLTNMHFD 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + TP + PA+DG+ P+ Sbjct: 239 LDYATLEAETPDHITPAYDGLVIRCPL 265 >gi|319407222|emb|CBI80861.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 270 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 134/270 (49%), Positives = 171/270 (63%), Gaps = 1/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M Y FTILGCG+S GVPR G WGACD N KN+R R+SL + R+ + G TT I+DT Sbjct: 1 MCHRYRFTILGCGSSPGVPRPNGYWGACDSNNSKNKRYRTSLLVERIHKLGMKTTAIIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++ +V ++A +YTH HADH HGID LR Y L QK ID+YA +KHL + Sbjct: 61 GPDFRSQMINARVSHLNAAVYTHFHADHTHGIDDLRSYALAQKCLIDIYADAFTLKHLNK 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YCF+ Y PI+ +I N ++ GG I LQ HG SLGFR GN Sbjct: 121 AFGYCFQTPKGSHYLPILKENLICENSE-FTIQGEGGDIILKAHLQIHGATHSLGFRIGN 179 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVN FP ++L L NLD LIIDAL+ H SHFS+ ++L I+ + PK AILTHM Sbjct: 180 VAYCTDVNEFPEKTLSGLMNLDVLIIDALQFESHPSHFSVDQALYWIKYLKPKRAILTHM 239 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V+ P+ V PA+ G+ F + + Sbjct: 240 DNSLDYNDVVNYVPAHVEPAYQGLTFETNV 269 >gi|83954237|ref|ZP_00962957.1| hypothetical protein NAS141_18064 [Sulfitobacter sp. NAS-14.1] gi|83841274|gb|EAP80444.1| hypothetical protein NAS141_18064 [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 111/267 (41%), Positives = 158/267 (59%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WGACDP NPKN R R S+ + R+++ G+ T+V++DT PD Sbjct: 3 EMKITILGCGSSGGVPRLGGHWGACDPANPKNARRRCSILVERITDVGT-TSVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAVLYTH HADH+HG+D LR + ++ + V+A + L + F Sbjct: 62 MRSQLLDAGVGRLDAVLYTHSHADHVHGLDDLRMIVINMRQRLPVWADTPTREALLDRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F +YPPI+ I+ + + GG + P L HG + +LGFR +VAY Sbjct: 122 YVFIQPPGSSYPPILEMNHIDG---DVTIDGPGGTLCFTPFLVNHGGMDALGFRVNDVAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P + L+ L I+DAL+ H +H L+++L I+ + P+ A+LT+MH D Sbjct: 179 LPDVAQIPDDIWPHLKGLRCWIVDALRRDPHPTHSHLAQTLGWIDQMAPQTAVLTNMHND 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDYD + TP + PAFDGM S P+ Sbjct: 239 LDYDTLAAETPDHIEPAFDGMTLSFPV 265 >gi|254455198|ref|ZP_05068633.1| beta-lactamase domain protein [Octadecabacter antarcticus 238] gi|198263608|gb|EDY87880.1| beta-lactamase domain protein [Octadecabacter antarcticus 238] Length = 264 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 110/265 (41%), Positives = 153/265 (57%), Gaps = 4/265 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG+S GVPR+ G WG CDP+NPKN R R SL ++R + G T V++DT PD Sbjct: 2 TITLRILGCGSSGGVPRLGGRWGDCDPSNPKNIRKRCSLLVTRTTPSGV-TRVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAV+YTH HADH+HG+D +R ++ + V+A D L F Sbjct: 61 LRQQLLDADVGELDAVIYTHAHADHVHGLDDIRMIVYNMRQRLQVWADGDTGNQLLARFG 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPPI + I+ + + AGG I IP+ +HG I +LGFR N AY Sbjct: 121 YAFVQPKGSNYPPICDLNTIDG---DVTIDGAGGPITFIPLEVEHGSIDALGFRINNAAY 177 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P + L NLD I+DAL+ H +H L+++L+ I+ + PK A+LT+MH+D Sbjct: 178 LPDVSDIPDDVWPLLTNLDLWIVDALRRDPHPTHAHLAKTLEWIDRVQPKQAVLTNMHID 237 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + T + PAFDG+ + Sbjct: 238 LDYATLAAETAPNIEPAFDGLTLTL 262 >gi|126729240|ref|ZP_01745054.1| hypothetical protein SSE37_23609 [Sagittula stellata E-37] gi|126710230|gb|EBA09282.1| hypothetical protein SSE37_23609 [Sagittula stellata E-37] Length = 266 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 119/268 (44%), Positives = 155/268 (57%), Gaps = 4/268 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R ++ G+ T V++DT Sbjct: 1 MSATLRFTILGCGSSGGVPRLGGHWGECDPANPRNRRRRCSLLVERTTDEGT-TRVLIDT 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L +V +DAV +TH HADH HG+D LR ++ +DV+A D L Sbjct: 60 TPDMREQLLDARVGHLDAVAWTHAHADHTHGLDDLRQIVFNTRQRLDVWADGDTQNDLIA 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + YPPI+N I+ + AGG I P HG I +LGFR GN Sbjct: 120 RFGYAFIQPEGSPYPPILNLHTIDGT---FTIDGAGGAIALTPFRVNHGSIDALGFRIGN 176 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY DV P + L+NLD I+DAL+ H +H L +L+ I PK A+LT+M Sbjct: 177 LAYLPDVIRIPDDVWPHLENLDCWILDALRRTPHPTHAHLDLALEWIARAAPKRAVLTNM 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+DLD+D V TP+ V PA DGM S Sbjct: 237 HIDLDHDTVAAETPAHVTPAHDGMTISY 264 >gi|86136158|ref|ZP_01054737.1| hypothetical protein MED193_18584 [Roseobacter sp. MED193] gi|85827032|gb|EAQ47228.1| hypothetical protein MED193_18584 [Roseobacter sp. MED193] Length = 265 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 110/268 (41%), Positives = 155/268 (57%), Gaps = 4/268 (1%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + +TILGCG+S GVPR+ G WG CDPTNP+NRR R S+ + R G+ TTV++DT P Sbjct: 2 NELRYTILGCGSSGGVPRLGGHWGDCDPTNPRNRRRRCSMLVERDGPDGT-TTVLIDTSP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L V +D V+YTH HADH+HGID LR + + VYA D L F Sbjct: 61 DMRSQLLDANVGRLDGVVYTHSHADHVHGIDDLRMIVFNMRARVPVYADGDTQNALLSRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + YPPI++ I+ + GG I +P HG + +LGFR GN+A Sbjct: 121 GYAFVQPNGSPYPPILDLRTIDGA---FTIDGPGGEIPFLPFEVNHGAMDALGFRIGNLA 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV ++ + L+ LD ++D+L+ H +HF+L ++L I + PK A+LT+MH+ Sbjct: 178 YLPDVVEIAEDATQALEGLDCWVLDSLRRSPHPTHFNLDQALAWIARMQPKRAVLTNMHI 237 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY + T + PA+DGM P+ Sbjct: 238 DLDYATLEAETADHITPAYDGMVIRCPL 265 >gi|39935846|ref|NP_948122.1| putative hydrolase [Rhodopseudomonas palustris CGA009] gi|39649700|emb|CAE28221.1| possible hydrolase [Rhodopseudomonas palustris CGA009] Length = 267 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 114/265 (43%), Positives = 147/265 (55%), Gaps = 1/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 2 TLTLTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPEGGITRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F Sbjct: 62 LREQLISADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNQSTGEHVLYRFA 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCFK +YP I+ IE D + AGG + L QHG I +LG+R AY Sbjct: 122 YCFKQAPGSSYPAILESREIEAGDS-KTIAGAGGDLTLTAFLLQHGDIPALGYRIAGAAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P +S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D Sbjct: 181 TPDVHDIPEQSFPALEGLDLWIIDGLRYKHHASHFNIETALKWINRFKPKRAVITNMHAD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY+ + K P VVP FDGM+ Sbjct: 241 IDYETLRKELPDGVVPGFDGMRLEI 265 >gi|89070239|ref|ZP_01157563.1| PhnP-like protein [Oceanicola granulosus HTCC2516] gi|89044159|gb|EAR50317.1| PhnP-like protein [Oceanicola granulosus HTCC2516] Length = 265 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 114/267 (42%), Positives = 154/267 (57%), Gaps = 6/267 (2%) Query: 6 HFT--ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T ILGCG+S GVPR+ G WGACDP NPKNRRTR SL +SR + G T ++DT PD Sbjct: 3 RLTVRILGCGSSGGVPRLGGHWGACDPANPKNRRTRCSLLVSRE-DAGGVTRTLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAVLYTH HADH+HG+D LR + + V+A + + L F Sbjct: 62 MRAQLLAADVGRLDAVLYTHAHADHVHGLDDLRQVVFNTRTRLPVHADGETSEALLNRFA 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F A YPPI++ + P+ + AGG I P +HG I +LGFRF ++ Y Sbjct: 122 YAFAAPAGSQYPPILDLFDLSG---PVTVDGAGGTITFTPFPVRHGAIHALGFRFDDIVY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV P +S L L I+DAL+ H +H L+ +L IE P A+LT+MH+D Sbjct: 179 LPDVATIPDDSWPMLAGLRCWIVDALRREPHPTHSHLANTLAWIERAAPARAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+ V TP+ + PA+DG+ + + Sbjct: 239 LDYETVAAETPAHIEPAYDGLTLAFDV 265 >gi|192291494|ref|YP_001992099.1| hypothetical protein Rpal_3118 [Rhodopseudomonas palustris TIE-1] gi|192285243|gb|ACF01624.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 267 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 112/265 (42%), Positives = 146/265 (55%), Gaps = 1/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 2 TLTLTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPDGGITRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F Sbjct: 62 LREQLICADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNQSTGEHVLYRFA 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCFK +YP I+ IE D + AGG + L HG I +LG+R AY Sbjct: 122 YCFKQAPGSSYPAILESREIEAGDS-KTIGGAGGDLTLTAFLLHHGDIPALGYRIAGAAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P +S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D Sbjct: 181 TPDVHDIPEQSFPALEGLDLWIIDGLRYKHHASHFNIETALKWINRFKPKRAVITNMHAD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY+ + K P VVP +DGM+ Sbjct: 241 IDYETLRKELPDGVVPGYDGMRLEI 265 >gi|86749800|ref|YP_486296.1| putative hydrolase [Rhodopseudomonas palustris HaA2] gi|86572828|gb|ABD07385.1| hydrolase [Rhodopseudomonas palustris HaA2] Length = 266 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 114/266 (42%), Positives = 149/266 (56%), Gaps = 2/266 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G+S GVPR WGA DP+NPKNRR R SL RV+ G T V++DT PD Sbjct: 2 TLILTILGSGSSAGVPRPALGWGAADPSNPKNRRRRCSLLAERVTPDG-ITRVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DAV TH HAD HGID LR + +R I VY +H+ F Sbjct: 61 LREQLIDADVDHLDAVFLTHEHADQTHGIDDLRSVAMHMRRRIPVYLNQATAEHVVFRFH 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF +YPPI++ IE + ++ AGG + P L QHG I +LG+R G AY Sbjct: 121 YCFVTPPGSSYPPILDEHRIETGESR-SIEGAGGELTLAPFLVQHGDIPALGYRIGAAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P +S L+ LD IID L+ H SHF + +L I+ PK A++T+MH D Sbjct: 180 TPDVSDIPEQSFPALEGLDLWIIDGLRYKPHGSHFHIDAALGWIDRFKPKRAVITNMHAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 +DY+ + K P VVP FDGM+ Sbjct: 240 IDYETLRKELPDGVVPGFDGMRLEVE 265 >gi|323136439|ref|ZP_08071521.1| beta-lactamase domain protein [Methylocystis sp. ATCC 49242] gi|322398513|gb|EFY01033.1| beta-lactamase domain protein [Methylocystis sp. ATCC 49242] Length = 264 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 155/265 (58%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ WG C+P NPKNRR R S+ +++ S + T ++VDTGPD Sbjct: 2 TLTVTILGCGSSGGVPRVGQGWGKCNPANPKNRRRRCSILVAKGSAESA-TQILVDTGPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DA+LYTHPHADH HG+D +RG + R I Y + + F Sbjct: 61 LREQLIAADVKRLDAILYTHPHADHTHGVDDVRGLVIMSGRRIPAYMDEPTSRQITNKFD 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F+ YPP++ + P+ ++ GG ++ P HG + +LGFRFGN+AY Sbjct: 121 YIFETPPGSFYPPLLTEHRLRPGR-PVTIEGPGGEMDVTPFRLDHGDMDALGFRFGNIAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D++A P+ES + L+ LD IIDAL+ H +H S+ ++L + K AILT +HVD Sbjct: 180 TPDLHAIPSESAQFLEGLDLWIIDALRYQRHGTHLSVEQALAFVAQFKAKRAILTDLHVD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDYD + P V PA+DG++ Sbjct: 240 LDYDALAAMLPENVAPAYDGLRIEV 264 >gi|163743053|ref|ZP_02150436.1| hypothetical protein RG210_02267 [Phaeobacter gallaeciensis 2.10] gi|161383736|gb|EDQ08122.1| hypothetical protein RG210_02267 [Phaeobacter gallaeciensis 2.10] Length = 265 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 121/266 (45%), Positives = 156/266 (58%), Gaps = 4/266 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 4 LRFTILGCGSSGGVPRLGGHWGDCDPDNPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDM 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +D V+YTH HADH+HGID LR + I VYA D L F Y Sbjct: 63 RSQLLDSGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRDRIPVYADGDTQNALLSRFGY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F YPPI++ I+ P+ + GG I P HG + +LGFR G++AY Sbjct: 123 AFVQPAGSPYPPILDLRSIDG---PLTISGPGGDITLRPFEVNHGSMDALGFRIGDLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV P +L +LQ+LD I+DAL+ H +H SL E+L+ IE + PK A+LT+MH+DL Sbjct: 180 PDVAKIPDSALVELQDLDCWILDALRRKPHPTHLSLDEALEWIERMAPKRAVLTNMHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPI 270 DY V TP + PA+DGM PI Sbjct: 240 DYAEVAAETPDHIDPAYDGMVIEYPI 265 >gi|220926665|ref|YP_002501967.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219951272|gb|ACL61664.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 269 Score = 338 bits (867), Expect = 5e-91, Method: Composition-based stats. Identities = 113/265 (42%), Positives = 158/265 (59%), Gaps = 2/265 (0%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVDTGPD 63 ILGCG+S GVPR+ WGACDP P+NRR R S+ + R G T V+VDT PD Sbjct: 4 LTLRILGCGSSGGVPRVGSGWGACDPAEPRNRRGRCSILVEGRQDHSGPATMVLVDTSPD 63 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V+ +DAVL+TH HADH HGID LR ++ +R I VYA L F Sbjct: 64 LREQLLDAGVMRLDAVLFTHAHADHTHGIDDLRPLVIQMRRRIPVYADATTQALLKLRFG 123 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YPPI++ + + +P+ + GG + A +HG +LGFRF + AY Sbjct: 124 YCFETAPGSQYPPILDLHELPDG-IPLSLAGPGGPVTASSFRMEHGDEEALGFRFADAAY 182 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P + L+ LD LIIDAL++ H +H+S+S++L IE + P+ AILT++H D Sbjct: 183 APDVSTMPEAAKAHLRGLDLLIIDALRDTPHPTHYSVSDALALIEEVRPRRAILTNLHTD 242 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ + + P VVPA+DG+ + Sbjct: 243 LDYEALRRRLPEGVVPAYDGLTVTV 267 >gi|260434144|ref|ZP_05788115.1| beta-lactamase domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417972|gb|EEX11231.1| beta-lactamase domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 268 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 113/267 (42%), Positives = 154/267 (57%), Gaps = 4/267 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ G WG CDP +P+N R R S+ + R G+ T+V++DT PD Sbjct: 3 TLRCTILGCGSSGGVPRLGGQWGDCDPNDPRNVRRRCSMLVERDGPDGT-TSVLIDTTPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +D V+YTH HADH+HGID LR + V+A D L F Sbjct: 62 MRSQLLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMHSRVRVWADGDTQNALLGRFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F + YPPI++ I+ P + GG+I PI HG I +LGFR G++AY Sbjct: 122 YAFIQPEGSPYPPILDLKTIDG---PFAVDGPGGLIPFRPIKVNHGSIDALGFRIGDLAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV +S +L++LD L+IDAL+ H +H L ++L IE ++PK A+LT+MH+D Sbjct: 179 LPDVAEIYDDSWAELEDLDCLVIDALRRSPHPTHAHLEKTLGWIEKLHPKRAVLTNMHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LD+ V TP V PAFDGM P+ Sbjct: 239 LDFATVDAETPDNVAPAFDGMVIDQPL 265 >gi|90424205|ref|YP_532575.1| putative hydrolase [Rhodopseudomonas palustris BisB18] gi|90106219|gb|ABD88256.1| putative hydrolase [Rhodopseudomonas palustris BisB18] Length = 270 Score = 337 bits (865), Expect = 9e-91, Method: Composition-based stats. Identities = 115/267 (43%), Positives = 148/267 (55%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDPTNP NRR R SL VS +G+ T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPALGWGACDPTNPLNRRRRCSLMAELVSGQGT-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V IDAV TH HAD HGID LR + Q+R I VY H+ F Sbjct: 61 LREQLIDAAVDHIDAVFLTHEHADQTHGIDDLRSVVMAQRRRIPVYLNKVTAAHILLRFT 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ + YP I+ +E + + GG + L QHG I +LG+R GN AY Sbjct: 121 YCFEQAPESNYPAILEAHDVEAGESR-TIDGPGGALTLTAFLVQHGSIPALGYRIGNAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DVN P +S L+ LD IID L+ H SHF++ +L I PK A++T+M D Sbjct: 180 TPDVNDIPEQSWPLLEGLDLWIIDGLRFKHHGSHFNVEAALSWIARFKPKRAVITNMSAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +DY+++ P VVPA DGMQ + Sbjct: 240 VDYEVLRGQLPPHVVPAIDGMQLTLDA 266 >gi|115524875|ref|YP_781786.1| putative hydrolase [Rhodopseudomonas palustris BisA53] gi|115518822|gb|ABJ06806.1| putative hydrolase [Rhodopseudomonas palustris BisA53] Length = 265 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 120/265 (45%), Positives = 148/265 (55%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGA DP NPKNRR R SL R S G T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPALGWGAADPNNPKNRRLRCSLMAERTSSEGV-TRVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V IDAV TH HAD HGID LR + K I VY H+ F Sbjct: 61 LREQLLSTNVEHIDAVFLTHEHADQTHGIDDLRSVVMHMKSRIPVYLNQSTAAHILLRFT 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ +YP I+ IE D + GG + L QHG I +LG+R G AY Sbjct: 121 YCFEQAPGSSYPAILESRPIEAGDSR-TIAGKGGELTLSAFLLQHGDIPALGYRIGGAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ PAES L+NLD IID L+ H+SHF++ +LK I+ PK A++T+MH D Sbjct: 180 TPDVHDIPAESWPMLENLDLWIIDGLRYKHHASHFNVEAALKWIDRFKPKRAVITNMHAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ + K P+ VVP FDGM+ Sbjct: 240 LDYETLRKELPAGVVPGFDGMRLEI 264 >gi|90417683|ref|ZP_01225595.1| possible hydrolase [Aurantimonas manganoxydans SI85-9A1] gi|90337355|gb|EAS51006.1| possible hydrolase [Aurantimonas manganoxydans SI85-9A1] Length = 270 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 126/270 (46%), Positives = 163/270 (60%), Gaps = 2/270 (0%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D TILGC +S GVPRI GDWGACDPTNPKNRR RSS I R+ G T V +D Sbjct: 1 MSDTLRLTILGCASSPGVPRINGDWGACDPTNPKNRRLRSSALIERIGPNG-RTVVAIDC 59 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L +V +DAV+ THPHADHIHG+D LRGY L QK I V++ + E Sbjct: 60 GPDFREQMLMVRVAHLDAVVLTHPHADHIHGMDDLRGYMLTQKSRIPVHSDHSTHARVLE 119 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +FRYCF+ YPP+ + I + + AGG + P Q+HG I SLG+R G Sbjct: 120 AFRYCFETPAGSAYPPVARHVEISAGEA-FSVDGAGGKLSFAPFRQEHGSIHSLGYRIGP 178 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC+DV+ FP ++E + +IIDAL+ H SH S+ ++L I + A LTHM Sbjct: 179 LAYCSDVSDFPDAAIEAIAGAQHIIIDALQYRTHPSHLSVEQALDWISRLGVPEATLTHM 238 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H+ LDYD + + P V P FDG+ P+ Sbjct: 239 HIPLDYDTLCRELPDHVRPGFDGLTLEWPL 268 >gi|159043471|ref|YP_001532265.1| beta-lactamase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911231|gb|ABV92664.1| beta-lactamase domain protein [Dinoroseobacter shibae DFL 12] Length = 268 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 152/267 (56%), Gaps = 4/267 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 4 LRFTILGCGSSGGVPRLGGHWGDCDPENPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDM 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + +D V+YTH HADH HG+D LR + + V+A LF F Y Sbjct: 63 RAQLLDAGIGRLDGVVYTHSHADHTHGLDDLRMIVFNMRARLRVWADGPTQDSLFSRFGY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + YPPI+ I+ P+ + GG + P HG I SLGFR G++AY Sbjct: 123 AFVQPEGSPYPPILEMHTIDG---PVTIDGPGGPVTLCPFKVNHGSIDSLGFRIGDLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV ES L LD LI+DAL+ H +H L ++L+ I P+ AILT+MH+DL Sbjct: 180 PDVAKLLPESRAALTGLDTLILDALRRTPHPTHAHLDQALEWIAEFAPRQAILTNMHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPIP 271 DY V TP+ V PA+DGM P+P Sbjct: 240 DYATVAAETPAHVSPAYDGMVLHRPVP 266 >gi|209885246|ref|YP_002289103.1| hydrolase [Oligotropha carboxidovorans OM5] gi|209873442|gb|ACI93238.1| hydrolase [Oligotropha carboxidovorans OM5] Length = 271 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 109/260 (41%), Positives = 148/260 (56%), Gaps = 2/260 (0%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FTILG G+S GVPR WGACDPTNPKNRR R S + R S+ G T V++DT PD Sbjct: 5 FTILGSGSSAGVPRPALGWGACDPTNPKNRRRRCSAMVERTSDTG-ITRVVIDTSPDLRE 63 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++ V IDAV TH HAD HG+D LR + Q+ I Y + + F YCF Sbjct: 64 QLIDANVGHIDAVFLTHEHADQTHGMDDLRSVVMHQRSRIPTYMNQCTANDVDQRFSYCF 123 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 ++ YPPI+ +E + + GG I HG+I +LG+R GN AY D Sbjct: 124 RSPLGSDYPPILERRSVEAGES-HTIDGKGGPITLTAFWVDHGKIPALGYRIGNAAYTPD 182 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +N P ES L+NLD ++D L+ HSSHF + ++L I P+ A++T+MH D+DY Sbjct: 183 LNGIPPESFAALENLDLWVVDGLRYKPHSSHFCVDDALASIARFKPRRAVITNMHADIDY 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P+ VVP +DGM+ Sbjct: 243 EDLRHRLPAGVVPGYDGMRL 262 >gi|167646658|ref|YP_001684321.1| hypothetical protein Caul_2696 [Caulobacter sp. K31] gi|167349088|gb|ABZ71823.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 268 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 110/270 (40%), Positives = 151/270 (55%), Gaps = 4/270 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVS--ERGSNTTVIV 58 M FTILG G+S GVPR G+WG CDP P+N RTR S+ + R+ + ++TTV+V Sbjct: 1 MTGRLEFTILGSGSSGGVPRADGNWGDCDPAEPRNLRTRCSMLVRRLGGGDPAADTTVVV 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PDF +Q +R V +DA L+TH HAD HGID LR +FL +R + Y + L Sbjct: 61 DTAPDFRLQAVRAGVRRLDACLFTHDHADQAHGIDDLRPFFLNARRRVPTYMDAYTTQSL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F++ YP I + I + P + G I HG I ++G+RF Sbjct: 121 GRRFDYVFQS--RGGYPAICDAHSIPPHGQPWEIDGPSGAIPVTTFDVDHGEIRAVGYRF 178 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 GNVAY D FP ES L +LD I+DAL+ H +H + +L+ I P+ AILT Sbjct: 179 GNVAYTPDAIGFPEESWAALADLDVWIVDALRWTPHPTHAHVGLALEWIARARPRRAILT 238 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++H+DLD++ + P V PA+DGM F Sbjct: 239 NLHIDLDFNALAAKLPVGVEPAYDGMSFEI 268 >gi|220931941|ref|YP_002508849.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219993251|gb|ACL69854.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 252 Score = 334 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 145/262 (55%), Gaps = 12/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I + C NP+N+RTRSS+ + + +++VDT P+ Sbjct: 1 MEIVFLGTGTSHGVPVIGCNCKTCQSKNPRNKRTRSSIYVKF-----ESFSILVDTPPEL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q+L + +DA+LYTH HADHI G D +R + L KRP+ Y +K + +F Y Sbjct: 56 RLQLLNNGIHKVDAILYTHSHADHIMGFDDIRAFNLINKRPLPCYGNSSTIKDIKRTFNY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F A+ P V I + + I+ IP+ +HG++ LG+RFG +AY Sbjct: 116 IFNAVQMGGGLPQVQLIEVNS-------TFFIEDIKIIPLPVKHGKLDILGYRFGRIAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P + +KL+ LD LIIDAL+ H +H ++SE+L+ IE A LTH+ + Sbjct: 169 TDCSHIPESTYDKLEGLDILIIDALRYRPHPTHMNISEALEVIEKTGVSRAYLTHLSHSV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 +++ + K+ PS V PA+DG++ Sbjct: 229 EHEELKKNLPSWVRPAYDGLKI 250 >gi|268315780|ref|YP_003289499.1| beta-lactamase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262333314|gb|ACY47111.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 270 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 6/269 (2%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D T+LG G S GVP I C ++P+++RTR + I + +++DTG Sbjct: 5 TDTLRVTLLGTGTSTGVPVIGCTCRVCRSSDPRDKRTRCACYIEA-----NGLGILIDTG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q LRE + +DAVLYTH H DH+ GID LR +F + R I YA P+ + L+ Sbjct: 60 PDFRQQALREGIRRLDAVLYTHHHFDHVAGIDDLRPFFFENDRAIPCYAPPNTARVLYRM 119 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + Y F A P + +E GG + PI HG + G+R G Sbjct: 120 YAYIF-ADGTYPGVPRLRLHAVEGPFEVTSRYGDGGRVRVEPIEVLHGELPMYGYRIGRF 178 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD + P S E+L++LD L++DAL+ H +HFS+ E+++ I + HM Sbjct: 179 AYLTDASRIPETSYERLRDLDVLVLDALRERPHPTHFSIEEAVRVARRIGARQTYFIHMT 238 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 D+ + V P + A+DG+QF+ + Sbjct: 239 HDVLHAEVDARLPEGINLAYDGLQFTCRL 267 >gi|163738560|ref|ZP_02145974.1| hypothetical protein RGBS107_11067 [Phaeobacter gallaeciensis BS107] gi|161387888|gb|EDQ12243.1| hypothetical protein RGBS107_11067 [Phaeobacter gallaeciensis BS107] Length = 265 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 119/266 (44%), Positives = 156/266 (58%), Gaps = 4/266 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR+ G WG CDP NP+NRR R SL + R G+ TTV++DT PD Sbjct: 4 LRFTILGCGSSGGVPRLGGHWGDCDPDNPRNRRRRCSLLVERDGPEGT-TTVLIDTSPDM 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +D V+YTH HADH+HGID LR + I VYA D L F Y Sbjct: 63 RSQLLDTGTGRLDGVVYTHSHADHVHGIDDLRMIVFNMRDRIPVYADGDTQNALLSRFGY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F YPPI++ I+ P+ + GG I P HG + +LGFR G++AY Sbjct: 123 AFVQPAGSPYPPILDLRSIDG---PLTISGPGGDIILRPFEVNHGSMDALGFRIGDLAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV P +L +LQ+L+ I+DAL+ H +H SL E+L+ I+ + PK A+LT+MH+DL Sbjct: 180 PDVAKIPDSALAELQDLNCWILDALRRKPHPTHLSLDEALEWIDRMAPKRAVLTNMHIDL 239 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPI 270 DY V TP + PA+DGM PI Sbjct: 240 DYAQVAAETPDHIDPAYDGMVIEYPI 265 >gi|316934059|ref|YP_004109041.1| hypothetical protein Rpdx1_2723 [Rhodopseudomonas palustris DX-1] gi|315601773|gb|ADU44308.1| hypothetical protein Rpdx1_2723 [Rhodopseudomonas palustris DX-1] Length = 267 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 112/263 (42%), Positives = 145/263 (55%), Gaps = 1/263 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G+S GVPR WGA DP+NPKNRR R SL R++ G T V++DT PD Sbjct: 2 TLTLTILGSGSSAGVPRPALGWGAADPSNPKNRRLRCSLLAERITPEGGITRVLIDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DAV TH HAD HGID LR + KR I VY +H+ F Sbjct: 62 LREQLISADVDHLDAVFLTHEHADQTHGIDDLRSVVMAMKRRIPVYLNRSTGEHVLYRFA 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ +YP I+ IE D + AGG + L QHG I +LG+R AY Sbjct: 122 YCFEQAPGSSYPAILESREIEAGDS-KTIAGAGGDLTLTAFLVQHGDIPALGYRIAGAAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P S L+ LD IID L+ H+SHF++ +LK I PK A++T+MH D Sbjct: 181 TPDVHDIPEASFGALEGLDLWIIDGLRYKHHASHFNIETALKWINRFQPKRAVITNMHAD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 +DY+ + P VVP FDGM+ Sbjct: 241 IDYETLRCELPEGVVPGFDGMRL 263 >gi|295689510|ref|YP_003593203.1| metal-dependent hydrolase [Caulobacter segnis ATCC 21756] gi|295431413|gb|ADG10585.1| metal-dependent hydrolase [Caulobacter segnis ATCC 21756] Length = 273 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 109/273 (39%), Positives = 148/273 (54%), Gaps = 4/273 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG--SNTTVIV 58 M FTILG G+S GVPR G+WG CDP PKN R+R SL + R+ E G TTVI+ Sbjct: 1 MSASLEFTILGSGSSGGVPRADGNWGDCDPDEPKNHRSRCSLLVRRLGEGGRTHQTTVII 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PD +Q + V +DA L+TH HAD HGID LR +FL Q+ I Y L Sbjct: 61 DTSPDLRLQTVAAGVRRMDAALFTHDHADQAHGIDDLRPFFLNQRVRIPTYMDQATHDGL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F++ YP I P+++ + G I HG + ++G+R Sbjct: 121 LRRFEYVFRSQGG--YPAICEPLLLPPLGHDFEISGPSGDILVHTFDVDHGEVRAVGYRI 178 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G+VAY DV A P S L +L+ I+DAL+ H +H + +L+ I + PK AILT Sbjct: 179 GDVAYTPDVRAIPESSWADLADLEVWIVDALRWTPHPTHAHVELALEWIARVKPKRAILT 238 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 ++H+DLDY + P V PA+DG++F P Sbjct: 239 NLHIDLDYHALAAKLPPGVEPAYDGLRFQLRAP 271 >gi|16126064|ref|NP_420628.1| hypothetical protein CC_1821 [Caulobacter crescentus CB15] gi|221234834|ref|YP_002517270.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] gi|13423256|gb|AAK23796.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220964006|gb|ACL95362.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] Length = 268 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 113/270 (41%), Positives = 149/270 (55%), Gaps = 4/270 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS--NTTVIV 58 M FTILG G+S GVPR G+WG CDP++P+N R+R SL + R S G+ TTVI+ Sbjct: 1 MSGELEFTILGSGSSGGVPRADGNWGDCDPSDPRNHRSRCSLLVRRPSPAGALHETTVII 60 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PD +Q V +DA L+TH HAD HGID LR +FL Q+ I Y L Sbjct: 61 DTSPDLRLQTSAAGVRRMDAALFTHDHADQAHGIDDLRPFFLNQRARIPAYMDRATHDGL 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F Y F + YP I P +I V ++ G I HG + ++G+R Sbjct: 121 TQRFTYIFISQGG--YPAICEPRLIPPLGVDFAIEGPSGDIAVQTFDVDHGEVRAVGYRI 178 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G VAY D A P ES LQ+LD I+DAL+ H +H + +L+ I P+ AILT Sbjct: 179 GGVAYTPDARAIPEESWPALQDLDVWIVDALRWTPHPTHAHVDLALEWIARAKPRRAILT 238 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++H+DLDY + P V PAFDGM+FS Sbjct: 239 NLHIDLDYQALAARLPPHVEPAFDGMRFSI 268 >gi|310816872|ref|YP_003964836.1| beta-lactamase domain protein [Ketogulonicigenium vulgare Y25] gi|308755607|gb|ADO43536.1| beta-lactamase domain protein [Ketogulonicigenium vulgare Y25] Length = 268 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 114/260 (43%), Positives = 157/260 (60%), Gaps = 4/260 (1%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG+S GVPR+ G+WG CDP PKN RTR S+ ++R +++G T V++DT PD Q+ Sbjct: 11 ILGCGSSGGVPRLGGEWGDCDPFEPKNTRTRCSILVTRETDQG-RTQVLIDTSPDMRQQL 69 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L V ++D VLYTHPHADH+HGID LR + +DV+ + F Y FK Sbjct: 70 LAADVRTLDGVLYTHPHADHVHGIDDLRAISFNGDQRLDVWMDASTTAAITHRFGYIFKT 129 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + YPPI +IE P+ + AGG I P+ +HG IS+LGFRF ++AY DV+ Sbjct: 130 PEGSPYPPICVQRLIEG---PVTITGAGGPITFEPLRVEHGNISALGFRFADIAYIPDVS 186 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 P + +L LD I+DAL+ H SH ++++L I+ PK A+LT+MHVDLDY Sbjct: 187 LIPEDVWPQLSGLDCWIVDALRYKPHPSHSHVAQTLGWIDRAAPKIAVLTNMHVDLDYQT 246 Query: 249 VLKSTPSRVVPAFDGMQFSS 268 + + + V PAFDGM Sbjct: 247 LGQELMAGVTPAFDGMVLRF 266 >gi|197105065|ref|YP_002130442.1| hypothetical protein PHZ_c1602 [Phenylobacterium zucineum HLK1] gi|196478485|gb|ACG78013.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 298 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 102/271 (37%), Positives = 151/271 (55%), Gaps = 3/271 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG-SNTTVIVD 59 M ILGCG+S GVPR G+WG CDP NPKN RTR S+ + R + S T+V+VD Sbjct: 25 MSATLEVVILGCGSSGGVPRADGEWGDCDPANPKNLRTRCSIFVRRKAADPLSETSVLVD 84 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 P+ Q R V +DAVL TH HAD +HG+D +R ++L+Q+ I + P + + Sbjct: 85 ASPELRQQTARAGVKRLDAVLLTHDHADQVHGLDDVRAFYLRQQARIPCWMDPATTRTMM 144 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F+ + YP I + + P ++ G I Q HG + S+G+RFG Sbjct: 145 RRFGYIFEG--EGGYPAICEREALPPHGTPWAVEGPSGPIPVRTFDQDHGGVRSVGYRFG 202 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 VAY +DV + E L +LD I+DAL+ H +H L +L+ I+ + P+ AILT+ Sbjct: 203 GVAYSSDVVGLDEAAFEALADLDVWIVDALRRRPHPTHAHLDRALEWIDRVRPRRAILTN 262 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 MH+D+D++ + + P V PA+DG+ + Sbjct: 263 MHIDMDFETLRRELPEGVEPAYDGLTIQHEL 293 >gi|91977190|ref|YP_569849.1| putative hydrolase [Rhodopseudomonas palustris BisB5] gi|91683646|gb|ABE39948.1| putative hydrolase [Rhodopseudomonas palustris BisB5] Length = 266 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 114/265 (43%), Positives = 148/265 (55%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G+S GVPR WGA DP+NPKNRR R SL RV+ G T V++DT PD Sbjct: 2 TLTLTILGSGSSAGVPRPALGWGAADPSNPKNRRRRCSLLAERVTPDG-ITRVLIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DAV TH HAD HGID LR L K+ I VY H+ F Sbjct: 61 LREQLIDADVDHLDAVFLTHEHADQTHGIDDLRSVVLHMKQRIPVYLNKSTADHVLLRFA 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF +YPPI++ IE + + AGG + L QHG I +LGFR AY Sbjct: 121 YCFTRAPGSSYPPILDSRSIEAGESR-SIAGAGGELTLTAFLLQHGDIPALGFRIDAAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P S +L+ LD IID L+ H+SHF++ +L+ I+ PK A++T+MH D Sbjct: 180 TPDVHDIPESSFAQLEGLDLWIIDGLRYKHHASHFNIEAALRWIDRFKPKRAVITNMHAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY+ + + P VVP FDGM+ Sbjct: 240 LDYETLRRELPEGVVPGFDGMRLDV 264 >gi|188583887|ref|YP_001927332.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179347385|gb|ACB82797.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 268 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 114/267 (42%), Positives = 154/267 (57%), Gaps = 1/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG+S GVPR+ WGACDP P+NRR R SL + R G TTV+VDT PD Sbjct: 3 SLSLRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRDGGGGATTVLVDTSPD 62 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +DA+LYTH HADH HGID +R + R I V+A P L + F Sbjct: 63 LREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTRTMLIKRFG 122 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F+ YPPI++ + +V + + AGG + A +HG + GFRFG AY Sbjct: 123 YAFETPPGSAYPPILDLHEMREGEV-LTIDGAGGPVAAEAFRMEHGNEIAHGFRFGPAAY 181 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT++H D Sbjct: 182 APDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTNLHTD 241 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY + P VVPA+DG+ + + Sbjct: 242 LDYATLAGKLPPGVVPAYDGLTATVDL 268 >gi|114570001|ref|YP_756681.1| beta-lactamase-like protein [Maricaulis maris MCS10] gi|114340463|gb|ABI65743.1| beta-lactamase-like protein [Maricaulis maris MCS10] Length = 284 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 145/272 (53%), Gaps = 6/272 (2%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS------NT 54 M T+LG G+S GVPR GDWG CDP NPKN R R S + + R T Sbjct: 1 MTGITRLTLLGTGSSGGVPRANGDWGDCDPANPKNLRRRCSALVEQARSRDDLDAGEAVT 60 Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 V++DT PDF Q+L +V ID VL TH HAD HGID LR + +Q++ I V+ Sbjct: 61 RVVIDTSPDFREQMLSARVTRIDTVLLTHDHADQTHGIDDLRAFAYQQRQRIPVWMDTAT 120 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L E F Y F A YPPI++ + I + GG + P Q+HGRI S+ Sbjct: 121 RATLTERFGYTFAAPPGSGYPPILDQCAMPAFGSDIKIDGPGGSVVITPFDQEHGRIRSV 180 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 GF+ G +AY D+N P +S L + IDAL++ H +HF + +L+ +E + + Sbjct: 181 GFKIGEIAYSADINGLPDDSARILDGVKCWAIDALRHEPHPTHFHVEAALEALERVGAEF 240 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LT++H+ LD+D + P V FDG+Q Sbjct: 241 GVLTNLHITLDHDQLSAKLPEGVRAGFDGLQI 272 >gi|227537338|ref|ZP_03967387.1| phosphonate metabolism protein PhnP [Sphingobacterium spiritivorum ATCC 33300] gi|227242841|gb|EEI92856.1| phosphonate metabolism protein PhnP [Sphingobacterium spiritivorum ATCC 33300] Length = 254 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 136/265 (51%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C +P+N+R RSS+ I +++DTGPDF Sbjct: 1 MKITFLGTGTSQGVPVIACHCEVCQSADPRNKRLRSSVMIEF-----EGNNIVIDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE+V +DA+L TH H DHI G+D +R + +QK+ I +Y + L F Y Sbjct: 56 RYQMLREEVNHLDAILMTHSHKDHIAGLDDVRAFNYQQKQSIPIYGTQALHEALKREFYY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D YP + +E ++ E IPI H ++ LG+R N AY Sbjct: 116 AFS---DIKYPGVPQ---LELREIDGSQSFHLYGKEIIPIEVMHFKMPVLGYRIANFAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD ES+EKL+ +++L+I+AL+ H SHF+L E++ + +N K LTH+ L Sbjct: 170 TDAKTVSDESVEKLKGVEYLVINALQKEPHISHFTLEEAISFADKVNAKQTYLTHISHRL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V + P + A+DG+ Sbjct: 230 GLHEEVSRELPDHIELAYDGLSIKL 254 >gi|329850683|ref|ZP_08265528.1| beta-lactamase-like protein [Asticcacaulis biprosthecum C19] gi|328840998|gb|EGF90569.1| beta-lactamase-like protein [Asticcacaulis biprosthecum C19] Length = 271 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 110/269 (40%), Positives = 148/269 (55%), Gaps = 3/269 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVD 59 M ILG G S GVPRI G WGACDP NPKNRRTR S R + T+V+VD Sbjct: 1 MSKILTVKILGSGCSTGVPRIDGFWGACDPENPKNRRTRCSAWFGLRDTVTDGVTSVVVD 60 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T P+F Q++R V +DA+L+TH HAD HG+D +R Y + PID Y + Sbjct: 61 TSPEFREQMVRAGVNHVDAILWTHDHADQSHGLDDMRAYTFARGGPIDGYMDEATYETFR 120 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F YPPI +P VI + + + GG + I Q HG I S+G+R G Sbjct: 121 ARFDYVFTG--KFGYPPICDPHVIMPHGLTWGVDGDGGHVPIITFDQGHGPIRSVGYRIG 178 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +VAY +DVN P SLE L + I+DAL+ H +H L +L+ I + P+ AILT+ Sbjct: 179 DVAYSSDVNVMPEASLEALDGVKVWIVDALRRRTHPTHAHLDLALEWIARVKPERAILTN 238 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H D+DY+ + P + PA+D +Q Sbjct: 239 LHHDMDYESLKAELPDGIEPAYDQLQVDV 267 >gi|254293990|ref|YP_003060013.1| beta-lactamase [Hirschia baltica ATCC 49814] gi|254042521|gb|ACT59316.1| beta-lactamase-like protein [Hirschia baltica ATCC 49814] Length = 271 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 113/268 (42%), Positives = 153/268 (57%), Gaps = 3/268 (1%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDT 60 K ILGCG+S GVPRI GDWG CDPT KNRR+R S+ I + S++ S T V++DT Sbjct: 4 KSKIQLRILGCGSSGGVPRINGDWGDCDPTEVKNRRSRCSVLIRKWSDKHSKPTQVLIDT 63 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L V +DAV+YTH HAD HGID LR K + V+ L Sbjct: 64 SPDMREQLLAANVKRLDAVVYTHDHADQSHGIDDLRAIAYSNKMRLPVHMDTATASTLMT 123 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F YCF YP I+ + + GG +E +P+ Q HGRI SLGFR G Sbjct: 124 RFGYCFHG--GGGYPSILEGKDSIRVGEVLNLDGPGGKLELLPLDQDHGRIRSLGFRMGP 181 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AYC D P ++ + L +D LI+DAL+ H SH L +L+ I+ + P+ A+LT+M Sbjct: 182 IAYCNDTVGLPEDTFQALDGVDTLIVDALRYHQHPSHAHLDLALEWIDRVKPRIAVLTNM 241 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+D+DY + K P V+PA+DGM+ + Sbjct: 242 HIDMDYKTLQKELPENVMPAYDGMELEA 269 >gi|154253555|ref|YP_001414379.1| beta-lactamase-like protein [Parvibaculum lavamentivorans DS-1] gi|154157505|gb|ABS64722.1| beta-lactamase-like protein [Parvibaculum lavamentivorans DS-1] Length = 272 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 108/273 (39%), Positives = 145/273 (53%), Gaps = 6/273 (2%) Query: 1 MKDYYHFTILGCGASLGVPRIT---GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV- 56 MK TILG G+S GVPRI G WGACDP PKNRR R SL I + + TV Sbjct: 1 MK--MRATILGSGSSGGVPRIGAGGGFWGACDPKEPKNRRRRCSLLIEQWDRDPTAKTVV 58 Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +VDT P+ Q++ +DAVL+TH HAD HGID LR L ++R +D + Sbjct: 59 LVDTAPEMRDQLIDADTGWVDAVLFTHDHADQCHGIDDLRMVALNKRRRVDCWMDAATHD 118 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L F YCF+ YP I+N +I + I + GG + A+ Q HG I SLGF Sbjct: 119 TLMTRFGYCFREKPGSGYPAILNDHLISRSGQEIVIDGPGGQVRAVAFDQDHGNIRSLGF 178 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 RFG +AY D P ES + +D I+DAL+ H +H + +L ++ K+ + Sbjct: 179 RFGPLAYSADAVGIPDESFALIDGIDCWIVDALRYAPHPTHAHVEMALDWLKRAGTKHGV 238 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 LT++HVDLDY + P V P +DGM+ Sbjct: 239 LTNLHVDLDYAKLKAELPEGVEPGYDGMRLEFE 271 >gi|86133744|ref|ZP_01052326.1| metallo-beta-lactamase superfamily protein [Polaribacter sp. MED152] gi|85820607|gb|EAQ41754.1| metallo-beta-lactamase superfamily protein [Polaribacter sp. MED152] Length = 260 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 13/268 (4%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K T LG G S G+P I C + K++R RSS+ IS + + ++D G Sbjct: 5 KKQLEITFLGTGTSQGIPMIASKDPVCLSDDVKDKRLRSSILIS-----WDDVSYVIDCG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q++RE V ++ VL+TH HADH G+D LR Y K + +Y +K L + Sbjct: 60 PDFRQQMIREDVQLVNGVLFTHEHADHTAGLDDLRPYCYKIGE-MPIYLNARTLKSLEQR 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F + P V P +++ + + IP+ HGR+ +R + Sbjct: 119 FEYIFSKENRYPGAPSVEPTIVDKDP------FFINDVTIIPLEVMHGRLPVTSYRIQDF 172 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TDV E +KLQNLD L+++AL+ H +HF+L E+L + + PK TH+ Sbjct: 173 AYLTDVKFVVEEEKKKLQNLDVLVVNALRIEEHPTHFNLQEALDFVAELKPKRTYFTHIS 232 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L ++ V + P V AFDG++ + Sbjct: 233 HKLGFHEEVSNNLPENVFLAFDGLKITV 260 >gi|296445796|ref|ZP_06887748.1| beta-lactamase domain protein [Methylosinus trichosporium OB3b] gi|296256624|gb|EFH03699.1| beta-lactamase domain protein [Methylosinus trichosporium OB3b] Length = 264 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 156/261 (59%), Gaps = 2/261 (0%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S GVPR+ WGACDP+NPKNRR R S+ +R + S T V++DT PD Q Sbjct: 6 TILGCGSSGGVPRVGQGWGACDPSNPKNRRRRCSILAARTTGE-SRTNVLIDTSPDLREQ 64 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ V +DA+L+THPHADH HG+D +RG L+ R I Y K L F Y F+ Sbjct: 65 LIDAAVDHLDAILFTHPHADHTHGVDDVRGLVLESGRRIPAYLDEPTAKMLTSRFDYIFE 124 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 YPP+++ I I + GGV+EA+P HG + +LGFR G +AY D+ Sbjct: 125 TPPGSFYPPLLDEHRIHLGRE-IAVDGPGGVVEAMPFRLDHGDMDALGFRIGGLAYTPDL 183 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N+ P ES L+ LD IIDAL++ H +H S+ E+L+ I P+ AILT +HVDLDY Sbjct: 184 NSVPKESFRHLEGLDVWIIDALRHKRHGTHLSVGEALEWIAHFKPRRAILTDLHVDLDYH 243 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + P V PA+DG++ Sbjct: 244 ALAAMLPEHVTPAYDGLRIEL 264 >gi|300769811|ref|ZP_07079691.1| lipoate-protein ligase B [Sphingobacterium spiritivorum ATCC 33861] gi|300763262|gb|EFK60078.1| lipoate-protein ligase B [Sphingobacterium spiritivorum ATCC 33861] Length = 254 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C + +N+R RSS+ I V++DTGPDF Sbjct: 1 MKITFLGTGTSQGVPVIACHCEVCQSADHRNKRLRSSVMIEF-----EGNNVVIDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE+V +DA+L TH H DHI G+D +R + +QK+ I +Y + L F Y Sbjct: 56 RYQMLREEVNHLDAILMTHSHKDHIAGLDDVRAFNYQQKQSIPIYGTQALHEALKREFYY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D YP + +E ++ E PI H ++ LG+R N AY Sbjct: 116 AFS---DIKYPGVPQ---LELREIDDSQSFHLYGKEITPIEVMHFKMPVLGYRIENFAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD ES+EKL+ +++L+I+AL+ H SHF+L E+++ +NPK LTH+ L Sbjct: 170 TDAKTVSDESVEKLKGVEYLVINALQKEPHISHFTLEEAVEFANQVNPKQTYLTHISHRL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K P + A+DG+ Sbjct: 230 GLHEEVSKELPDHIQLAYDGLSIKL 254 >gi|217976726|ref|YP_002360873.1| beta-lactamase domain protein [Methylocella silvestris BL2] gi|217502102|gb|ACK49511.1| beta-lactamase domain protein [Methylocella silvestris BL2] Length = 265 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 113/263 (42%), Positives = 151/263 (57%), Gaps = 1/263 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR+ WGACDP NP+NRR R S+ + + G T V+VDT PD Sbjct: 2 SLAITILGCGSSGGVPRVAQGWGACDPLNPRNRRRRCSIFVEQTGPDGGKTAVLVDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +D VL TH HADH HGID +R + + I++Y + +F Sbjct: 62 LREQLLDLGATRLDGVLMTHAHADHTHGIDDVRPLVISARHKINIYMDETTSAVVRSNFN 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F YPP++ + P+ + GG + A P +HG I +LGFRFG++AY Sbjct: 122 YIFVTPPGSQYPPLLTEHRL-IPGAPVAVNGPGGPLRATPFRLEHGEIDALGFRFGDIAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N PAESL L+ LD I+DAL+ H SHFSLSE+L I + PK AILT++H D Sbjct: 181 SPDLNGIPAESLGYLEGLDLWIVDALRYTRHPSHFSLSETLDWIARLKPKRAILTNLHTD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 LD+ + P V PA+DGM+ Sbjct: 241 LDFARLAAELPPHVEPAYDGMRI 263 >gi|158423888|ref|YP_001525180.1| metal-dependent hydrolase [Azorhizobium caulinodans ORS 571] gi|158330777|dbj|BAF88262.1| metal-dependent hydrolase [Azorhizobium caulinodans ORS 571] Length = 264 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 125/265 (47%), Positives = 158/265 (59%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ WGACDP P+NRR R SL + R G TTV+VD PD Sbjct: 2 TLKFTILGCGSSGGVPRVGQGWGACDPNEPRNRRRRCSLLVQRTGPDGV-TTVLVDASPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DA+L TH HADH HGID +R + +R +DVY + + + F Sbjct: 61 LREQLLDVGVTHVDALLITHEHADHTHGIDDVRPLVIHNRRRMDVYMDEETARAMHARFG 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF YPPI+ I + GG I A+P Q HG I S GFRFG VAY Sbjct: 121 YCFVTPPGSNYPPILTEHRFHEGRE-ITVPGQGGPITALPFRQHHGDIDSFGFRFGGVAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +DV+AFP SL+ L+NLD I+DAL+ H SHFSLSE+L+ E + P ILT++H D Sbjct: 180 SSDVSAFPQNSLKALENLDVWILDALRETPHPSHFSLSEALEHEERMRPARTILTNLHTD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + P R++PAFDGM F + Sbjct: 240 LDYGKLKARLPERIIPAFDGMIFEA 264 >gi|149371373|ref|ZP_01890859.1| metal-dependent hydrolase [unidentified eubacterium SCB49] gi|149355511|gb|EDM44070.1| metal-dependent hydrolase [unidentified eubacterium SCB49] Length = 259 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 11/269 (4%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK T LG G S G+P I D C NPK++R R S+ + + ++D Sbjct: 1 MKSPIFITFLGTGTSQGIPVIGSDHPVCLSKNPKDKRLRVSVLLQ-----WDDFNYVIDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + +DAVL TH H+DH GID +R + +Q + YA + L++ Sbjct: 56 GPDFRTQMLLNNIKHLDAVLLTHDHSDHTAGIDDIRPFCFRQGGDVTFYAEQNVYNALYK 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F + P + +IEN G + PI H + LG+R G Sbjct: 116 RFEYIFVTENKYPGAPTIKEELIEN-----LTPFNIGGKKVTPIRAMHNVLPVLGYRVGG 170 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Y TDV +EK++ L+++AL+ H SH +LSE+L+ IE++ P+ A LTH+ Sbjct: 171 FTYLTDVKTISDSEIEKIKGTKVLVVNALREEPHVSHLTLSEALELIEIVKPEKAYLTHI 230 Query: 241 HVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L +D V P V A+DG++ Sbjct: 231 SHWLGFHDEVEARLPENVHLAYDGLKIEV 259 >gi|163853582|ref|YP_001641625.1| beta-lactamase-like protein [Methylobacterium extorquens PA1] gi|163665187|gb|ABY32554.1| beta-lactamase-like protein [Methylobacterium extorquens PA1] Length = 272 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 118/271 (43%), Positives = 157/271 (57%), Gaps = 5/271 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN----TTVIVD 59 ILGCG+S GVPR+ WGACDP P+NRR R SL + R G+ TTV+VD Sbjct: 3 SLTLRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGATTVLVD 62 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T PD Q++ V +DA+LYTH HADH HGID +R + R I V+A P HL Sbjct: 63 TSPDLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTRAHLM 122 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG Sbjct: 123 KRFGYAFETPPGSLYPPILDLHEMRA-DEPLTIAGAGGPIVADAFRMEHGNEIAHGFRFG 181 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 AY DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT+ Sbjct: 182 PAAYAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTN 241 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +H DLDY + K P VVPA+DG+ + + Sbjct: 242 LHTDLDYATLAKKLPGHVVPAYDGLTATVDL 272 >gi|124002837|ref|ZP_01687689.1| lipoyltransferase [Microscilla marina ATCC 23134] gi|123992065|gb|EAY31452.1| lipoyltransferase [Microscilla marina ATCC 23134] Length = 255 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP I D C + +++R R+++ I N +++VDTGPDF Sbjct: 1 MKVTVLGSGTSQGVPVIACDCEVCQSLDYRDQRLRAAIHIEV-----DNQSIVVDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ S+DAVLYTH H DH G+D LR + KQ++ + VYA + M+ L + F Y Sbjct: 56 RQQMLRERITSLDAVLYTHQHKDHTAGMDDLRSFNFKQEKDVPVYARAEVMQQLKQEFAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F A ++ YP ++N + P + IPI H ++ GFR N Y Sbjct: 116 IFVA-KEKKYPGVLNIEEFIIENRPFDINGT----TIIPIEVLHHKLPVFGFRVQNFTYV 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N +EK++ +FLI+DAL+ H SHF++ ++L+ I + PK A LTH+ + Sbjct: 171 TDTNYIADNEIEKMKGTEFLILDALRKEEHISHFNIDQALEVIAKVQPKQAYLTHISHKM 230 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 + V P V A+DG+Q Sbjct: 231 GLHADVNAELPENVQLAYDGLQIE 254 >gi|88802749|ref|ZP_01118276.1| putative hydrolase [Polaribacter irgensii 23-P] gi|88781607|gb|EAR12785.1| putative hydrolase [Polaribacter irgensii 23-P] Length = 260 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 137/268 (51%), Gaps = 13/268 (4%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K + T LG G S GVP I C TN K++R RSS+ IS + ++D G Sbjct: 5 KKTLNITFLGTGTSQGVPMIASKDPVCLSTNIKDKRLRSSILIS-----WDDKKYVIDCG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q+LRE V + VL+TH H+DH GID LR + K + +Y + L + Sbjct: 60 PDFRQQMLREDVQLVHGVLFTHEHSDHTAGIDDLRPFCYKIGE-MPIYLNQRTLASLEQR 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F + P V P +I+ + P + I +PI HG++ LG+R N+ Sbjct: 119 FEYIFSKENRYPGAPSVQPNIIK--ETPFLLD----TISVVPIAVAHGKLPILGYRIQNI 172 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD+ EKL+NLD LI++AL+ H +H +L E+L + + PK A TH+ Sbjct: 173 AYLTDLKTIAIAEKEKLKNLDVLIVNALRIDAHPTHLNLQEALDFVGELQPKKAYFTHIS 232 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L +D V K PS V AFDG++ Sbjct: 233 HKLGFHDEVSKILPSNVFLAFDGLKIQV 260 >gi|218532444|ref|YP_002423260.1| beta-lactamase-like protein [Methylobacterium chloromethanicum CM4] gi|218524747|gb|ACK85332.1| beta-lactamase-like protein [Methylobacterium chloromethanicum CM4] Length = 272 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 117/271 (43%), Positives = 156/271 (57%), Gaps = 5/271 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN----TTVIVD 59 ILGCG+S GVPR+ WGACDP P+NRR R SL + R G+ TTV+VD Sbjct: 3 SLSLRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGATTVLVD 62 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T PD Q++ V +DA+LYTH HADH HGID +R + R I V+A P L Sbjct: 63 TSPDLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTHALLM 122 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG Sbjct: 123 KRFGYAFETPPGSLYPPILDLHEMRA-DEPLTIAGAGGPIVADAFRMEHGNEIAHGFRFG 181 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 AY DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT+ Sbjct: 182 PAAYAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTN 241 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +H DLDY + K P VVPA+DG+ + + Sbjct: 242 LHTDLDYATLAKKLPGHVVPAYDGLTATVDL 272 >gi|170747934|ref|YP_001754194.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654456|gb|ACB23511.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 267 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 114/265 (43%), Positives = 154/265 (58%), Gaps = 2/265 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG+S GVPR+ WGACDP P+NRR R S+ + R S G TT++VDT PD Sbjct: 3 SLTLRILGCGSSGGVPRVGSGWGACDPEEPRNRRRRCSILVERASGTG-RTTLLVDTSPD 61 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ V +D VLYTH HADH HGID LR + + I VYA L F Sbjct: 62 LREQLIDAGVTRLDGVLYTHAHADHTHGIDDLRPLVIAMRARIPVYADALTRSLLTARFG 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF+ YPPI++ + + ++ GG I + +HG ++LGFRFG AY Sbjct: 122 YCFETPPGSAYPPILDLRDLAAGR-DLALEGEGGAITVEALPVEHGNEAALGFRFGAAAY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV+ P SL +L+ LD LIIDAL++ H +HFS+S++L I + P+ A+LT++H D Sbjct: 181 MPDVSLIPEASLARLRGLDLLIIDALRDTPHPTHFSVSDALALIRAVRPRRAVLTNLHTD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + P +VPA+DGM S Sbjct: 241 LDYAALAARLPEGIVPAYDGMSLSL 265 >gi|254468952|ref|ZP_05082358.1| PhnP protein [beta proteobacterium KB13] gi|207087762|gb|EDZ65045.1| PhnP protein [beta proteobacterium KB13] Length = 255 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 102/262 (38%), Positives = 140/262 (53%), Gaps = 11/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G P I C NPKN+R+R S I+ T +++DT PDF Sbjct: 1 MRVTVLGAGSSAGTPVIGCQCAVCHSDNPKNKRSRCSSLITM----DDGTNILIDTSPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ +RE + IDAVLYTH HADH HG+D LR Y K K+ I ++A + M L F+Y Sbjct: 57 KMQAMRESIDKIDAVLYTHHHADHCHGMDDLRAYCQKYKKAIPIFANQNTMSELKLKFQY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + P+++ ++ G E IP+ HGR+ LG+R G AY Sbjct: 117 AIREETKFWETPVLHAQIVNQL-------FNIGSHEVIPLPVIHGRMEILGYRIGRFAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV+ P +LE LQ +D L++D L+ H SH+ +SL E INPK L HM D+ Sbjct: 170 TDVSEIPDSTLELLQGIDTLMLDCLRFEPHFSHYGFKQSLAMAEKINPKRTFLIHMTHDI 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 +YD V S P V A+DG++ Sbjct: 230 EYDAVSDSLPEHVFLAYDGLKL 251 >gi|146340773|ref|YP_001205821.1| hypothetical protein BRADO3831 [Bradyrhizobium sp. ORS278] gi|146193579|emb|CAL77596.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 266 Score = 321 bits (824), Expect = 5e-86, Method: Composition-based stats. Identities = 117/267 (43%), Positives = 155/267 (58%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGCG+S GVPR WGACDP NP+NRR R SL R G T V++DT PD Sbjct: 2 TLTLTILGCGSSAGVPRPALGWGACDPNNPRNRRRRCSLLAERRGAHGV-TRVVIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ QV IDAV TH HAD HGID LR L Q+R I VY K + F Sbjct: 61 LREQLIDTQVDHIDAVFLTHEHADQTHGIDDLRSVVLHQRRRIPVYLNQSTAKDIMHRFS 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF + YPPI+ IE + ++ GG ++ L QHG I +LG+R G+ AY Sbjct: 121 YCFVSPPGSDYPPILTQHSIEAGETR-AVEGKGGEMKLTAFLVQHGNIPALGYRIGDAAY 179 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D+N P ES L++LD I+D L+ H SHFS++++L IE P+ A++T+M D Sbjct: 180 TPDLNDIPEESWGALEDLDLWIVDGLRPASHPSHFSVNDALAWIERFKPRRAVITNMTAD 239 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LDY+++ +S P+ VVPA+DGM+ Sbjct: 240 LDYEVLRQSLPAGVVPAYDGMRLEVTA 266 >gi|153808231|ref|ZP_01960899.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] gi|149129134|gb|EDM20350.1| hypothetical protein BACCAC_02519 [Bacteroides caccae ATCC 43185] Length = 252 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 125/263 (47%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP+I C +PK+ R R+S + + +++D GPDF Sbjct: 1 MKIRILGSGTSTGVPQIGCTCPVCTSADPKDNRLRTSAIVET-----GDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVLR ID VL TH H DH+ G+D LR + + +YA L Y Sbjct: 56 RTQVLRLPFERIDGVLITHEHYDHVGGLDDLRPFCRF--GSVPIYAEQYVSDALRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ + K E IP+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEISVGQKFFINTTEVIPLRVMHGRLPILGYRIGQLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D LI++AL+ H +H L E+L + I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGIDVLIVNALRIAPHPTHQDLEEALAVAQRIRAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V + P + A+DG++ Sbjct: 228 GLHAEVERKLPENIHLAYDGLEI 250 >gi|295134377|ref|YP_003585053.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] gi|294982392|gb|ADF52857.1| metallo-beta-lactamase domain-containing protein [Zunongwangia profunda SM-A87] Length = 256 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C NPK++R R S+ + +++D GPDF Sbjct: 1 MKVTFLGTGTSQGIPIIGSTHPVCLSKNPKDKRLRVSVMVE-----WEGLNILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L +DA+L+TH H DH+ G+D +R +F +Q I +YA + L + F Y Sbjct: 56 RMQMLANNFARLDAILFTHEHNDHVAGLDDIRPFFFRQGN-IPIYAHERVLNALKKRFDY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P VN ++ +ND I K P+ H ++ G+R G AY Sbjct: 115 IFVTENKYPGAPGVNEHIVTDNDFEIQGK------HITPVSYLHNQLQVYGYRMGGFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ + EKL+NL+ +++ AL+ H SHF+L+E+L+ IE I P LTH+ L Sbjct: 169 TDIKSISETEAEKLKNLEVVVVSALRVEPHHSHFNLAEALEFIEKIKPNKTYLTHISHLL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 +D V +S P V A+D ++ S Sbjct: 229 GFHDEVEQSLPENVHLAYDNLKISI 253 >gi|332043586|gb|EGI79781.1| metallo-beta-lactamase domain-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 264 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 100/265 (37%), Positives = 138/265 (52%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C NPK++R R S+ +S T ++D GPDF Sbjct: 12 LKITFLGTGTSQGIPVIGSTHPVCLSDNPKDKRLRVSVLVS-----WDTYTFVIDCGPDF 66 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR ID V++TH HADH G+D +R +F +Q ID+YA + L + F Y Sbjct: 67 RQQMLRANCNKIDGVIFTHEHADHTAGLDDIRPFFFRQG-DIDIYAHKRVLGELQKRFAY 125 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D YP + N I E + P +K+ I IPI H ++ G+RF + AY Sbjct: 126 IFTTKDK--YPGVPNVIEHEIKNTPFKLKN----INMIPIEGYHHKLQVFGYRFKDFAYL 179 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ + LEKL NLD L+I+AL+ H SHF+L E+L I+ + PK A LTH+ L Sbjct: 180 TDMKTIAEKELEKLYNLDVLVINALREEAHISHFNLDEALSIIDRVKPKKAYLTHISHYL 239 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 +D V K P V A+D + Sbjct: 240 GFHDEVEKKLPENVFLAYDELTLEL 264 >gi|240141002|ref|YP_002965482.1| putative metal-dependent hydrolase [Methylobacterium extorquens AM1] gi|240010979|gb|ACS42205.1| putative metal-dependent hydrolase [Methylobacterium extorquens AM1] Length = 272 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 117/271 (43%), Positives = 156/271 (57%), Gaps = 5/271 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----VSERGSNTTVIVD 59 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TTV+VD Sbjct: 3 SLSLRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGGGGTTTVLVD 62 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T PD Q++ V +DA+LYTH HADH HGID +R + R I V+A P L Sbjct: 63 TSPDLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTHALLM 122 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F Y F+ YPPI++ + D P+ + AGG I A +HG + GFRFG Sbjct: 123 KRFGYAFETPPGSLYPPILDLHEMRA-DEPLTIVGAGGPIVADAFRMEHGNEIAHGFRFG 181 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 AY DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ AILT+ Sbjct: 182 PAAYAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRAILTN 241 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +H DLDY + K P VVPA+DG+ + + Sbjct: 242 LHTDLDYATLAKKLPGHVVPAYDGLTATVDL 272 >gi|254563516|ref|YP_003070611.1| metal-dependent hydrolase [Methylobacterium extorquens DM4] gi|254270794|emb|CAX26799.1| putative metal-dependent hydrolase [Methylobacterium extorquens DM4] Length = 276 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 118/275 (42%), Positives = 157/275 (57%), Gaps = 9/275 (3%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR--------VSERGSNTT 55 ILGCG+S GVPR+ WGACDP P+NRR R SL + R + G TT Sbjct: 3 SLSLRILGCGSSGGVPRVGYGWGACDPAEPRNRRRRCSLLVERRQGDGNGDGNGGGGTTT 62 Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 V+VDT PD Q++ V +DA+LYTH HADH HGID +R + R I V+A P Sbjct: 63 VLVDTSPDLREQLIDAGVTRLDALLYTHAHADHTHGIDDVRPLVIHMHRRIPVHADPLTH 122 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 HL + F Y F+ YPPI++ + D P+ + AGG I A +HG + G Sbjct: 123 AHLMKRFGYAFETPPGSLYPPILDLHEMRA-DEPLTIAGAGGPIVADAFRMEHGNEIAHG 181 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNA 235 FRFG AY DV+ P + +L LD LIIDAL+ H SH+S+S++L IE + P+ A Sbjct: 182 FRFGPAAYAPDVSLMPEAAKARLHGLDLLIIDALRETPHPSHYSVSDALALIEEVAPRRA 241 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 ILT++H DLDY + K P VVPA+DG+ + + Sbjct: 242 ILTNLHTDLDYATLAKKLPRHVVPAYDGLTATVDL 276 >gi|218678708|ref|ZP_03526605.1| beta-lactamase domain protein [Rhizobium etli CIAT 894] Length = 236 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 127/236 (53%), Positives = 165/236 (69%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR++ + + + G TTV++DT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRAAFMVQQFAPDGGVTTVVIDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q++R + +DAVLY+HPHADHIHGID LRGYF +R + ++A M L + Sbjct: 61 GPDFREQMIRARADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQFTMDRLRD 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F YC + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGFR G+ Sbjct: 121 AFGYCLETPPGSNYPPIVLPVVIENLDEPVEIRGPGGKIQFYPHIQQHGDIHSLGFRIGD 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 VAYC+D++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AI Sbjct: 181 VAYCSDISDFPPQTVDKLQNLDVLIIDALQYSYHPSHLSLEQSLDWIGRLKPKRAI 236 >gi|325287634|ref|YP_004263424.1| beta-lactamase domain-containing protein [Cellulophaga lytica DSM 7489] gi|324323088|gb|ADY30553.1| beta-lactamase domain protein [Cellulophaga lytica DSM 7489] Length = 261 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 139/265 (52%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C NPK++R R S+ IS N ++D GPDF Sbjct: 8 LKITFLGTGTSQGIPVIGSKHPVCLSKNPKDKRLRVSVLIS-----WDNYNFVIDCGPDF 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L+ + ++D +L+TH H+DH GID +R +F +Q I +YA ++ L + F Y Sbjct: 63 RQQMLQNPIPNLDGILFTHEHSDHTAGIDDIRPFFFRQG-DIPIYADNQVIQALKKRFAY 121 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F ++ P V I+ N G AIPI H R+ GFR + Y Sbjct: 122 IFADINRYPGAPAVAIHEIKEN-----TPFKIGNKVAIPIKALHNRLEVFGFRIDDFVYL 176 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV + E + KL++++ L+++AL+ H SHF+L E+L+ I ++ PK A LTH+ L Sbjct: 177 TDVKSISKEEIAKLKDVNVLVVNALRLEAHHSHFNLEEALEFIAVVKPKKAYLTHISHLL 236 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V KS P+ V A+D + + Sbjct: 237 GFHEEVEKSLPNNVHLAYDNLTINI 261 >gi|163788321|ref|ZP_02182767.1| metal-dependent hydrolase [Flavobacteriales bacterium ALC-1] gi|159876641|gb|EDP70699.1| metal-dependent hydrolase [Flavobacteriales bacterium ALC-1] Length = 253 Score = 319 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 102/265 (38%), Positives = 141/265 (53%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I D C NPK++R R S+ + N T +VD GPDF Sbjct: 1 MKITFLGTGTSQGIPIIGSDHPVCLSDNPKDKRLRVSILVE-----WDNFTYVVDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR VL ID +++TH HADH G+D +R +F +Q I +YA K L F Y Sbjct: 56 RQQMLRANVLKIDGIIFTHEHADHTMGLDDIRPFFFRQG-DISLYAHKRVFKALESRFDY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V I+N + G IE IP+ H ++ GFRF + AY Sbjct: 115 IFTSEKKYPGVPSVIKHEIKNEVFKV------GNIEVIPVDGLHHKLQVFGFRFKDFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ E +EKL+NLD L+++AL+ H SHF+L E+L+ I L+NPK A LTH+ L Sbjct: 169 TDMKTVKGEEVEKLKNLDVLVVNALREKPHISHFNLEEALEFIHLVNPKRAYLTHVSHLL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 +D V + P V A+D +Q + Sbjct: 229 GFHDDVQQKLPDNVFLAYDNLQITI 253 >gi|120435804|ref|YP_861490.1| metallo-beta-lactamase domain-containing protein [Gramella forsetii KT0803] gi|117577954|emb|CAL66423.1| metallo-beta-lactamase domain protein [Gramella forsetii KT0803] Length = 253 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I + C + K++R R S+ I+ ++ +++D GPDF Sbjct: 1 MDVTFLGTGTSQGIPIIGSEHPVCLSNDSKDKRLRVSILIT-----WNDLNILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V +DA+ YTH H DH G+D +R +F +Q I V+A + L + F Y Sbjct: 56 RQQMLANNVQKLDAIFYTHEHNDHTAGLDDIRPFFFRQG-DIPVFAHQRVLTALRKRFDY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V +IEN + P+ H R+ GFR + AY Sbjct: 115 IFTTENKYPGAPGVTEHIIENKPFSFH------GLTVTPVEFMHNRLQVFGFRVEDFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ + +EKL++L L++ AL+ H SHF+L E+L+ IE + P+ A LTH+ L Sbjct: 169 TDLKTIEEQEIEKLRDLKVLVVSALRIEPHHSHFNLEEALEFIEKVQPEKAYLTHISHML 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K P+ V A+D ++ + Sbjct: 229 GFHEEVEKDLPANVHLAYDNLKITV 253 >gi|305667096|ref|YP_003863383.1| putative hydrolase [Maribacter sp. HTCC2170] gi|88708030|gb|EAR00268.1| putative hydrolase [Maribacter sp. HTCC2170] Length = 254 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG G S G+P I D C +P+++R R S+ +S + ++D GPDF Sbjct: 1 MNITFLGTGTSQGIPVIGSDHPVCLSEDPRDKRLRVSVLLS-----WDDYNYVIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V +D +L+TH HADH GID +R +F +Q I +YA + L F Y Sbjct: 56 RQQMLTTNVSKLDGILFTHEHADHTAGIDDIRPFFFRQG-DIPIYAHERVAESLKTRFDY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D P V +I+NN + G +PI H R+ GFR Y Sbjct: 115 IFANEDRYPGAPAVEVNIIQNN-----IPFVLGGQMVVPINAHHNRLQVFGFRINGFTYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV E +EK++ + L+++AL+ H SHF+L E+L+ IE +NPK A L+H+ L Sbjct: 170 TDVKTVDDEEIEKIKGSNILVVNALRKKPHHSHFNLKEALEFIEKVNPKKAYLSHISHLL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K P+ V A+D +Q S Sbjct: 230 GFHEEVEKELPNNVHLAYDNLQLSL 254 >gi|255022088|ref|ZP_05294092.1| Metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Acidithiobacillus caldus ATCC 51756] gi|254968446|gb|EET26004.1| Metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Acidithiobacillus caldus ATCC 51756] Length = 256 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 94/268 (35%), Positives = 138/268 (51%), Gaps = 14/268 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M LG G+S G P++ D C +P+NRR+R+S+ + ++VDT Sbjct: 1 MSVRVR--FLGTGSSAGTPQVGCDCAVCRSDDPRNRRSRASILVEA-----EGVALLVDT 53 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+LRE V ++ AVLYTH HADHI+GID LR + QK+ +D Y K L E Sbjct: 54 GPDLRQQLLRENVRALTAVLYTHFHADHINGIDDLRAFNFLQKQVLDCYGDVRTGKELEE 113 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 FRYCF D P + ++ G + P+ HG + G+RF + Sbjct: 114 RFRYCFLPPDPAWAKPSLRMHHLDGPRE-------FGPLRVTPVPVLHGHLQIFGYRFND 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAY TD+ P S+ LQ LD LI+D L+ H +H +++E++ + I + THM Sbjct: 167 VAYLTDLKRIPESSMALLQKLDILILDCLREEEHPTHINVTEAIALAKEIGARYTYFTHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 DL + + + P + PA+DG+Q S Sbjct: 227 THDLGFASLAERLPEGMAPAYDGLQIRS 254 >gi|154490156|ref|ZP_02030417.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] gi|154089048|gb|EDN88092.1| hypothetical protein PARMER_00388 [Parabacteroides merdae ATCC 43184] Length = 261 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 15/267 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C ++ ++ R R+S+ + +++D GPDF Sbjct: 1 MEITFLGTGTSTGVPEIGCQCEVCTSSDKRDWRLRTSVLVET-----DGKRILLDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QV+R + +DAVL +H H DH+ G+D LR + ++ +DVYA + + + Y Sbjct: 56 RWQVIRNKTYRLDAVLISHEHYDHVGGLDDLRPFCREKG--VDVYAEDNVAEAIETRIPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+A YP + N + + P + I PI HG++ G+R GN+AY Sbjct: 114 VFRA---HKYPGVPNLELHRIGNEPFVVAG----ISVTPIRVMHGKLPIFGYRIGNMAYL 166 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV P E KL+ LD LI+ AL+ G H +H SL E+L IE I PK L HM + Sbjct: 167 TDVKYLPEEEYAKLEGLDVLILTALRRGAHPTHESLEEALVNIERIKPKETYLIHMSHRI 226 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSSPI 270 + V K P V A+DG+ S+ + Sbjct: 227 GLHAEVEKELPPHVHLAYDGLHVSTAL 253 >gi|298506501|gb|ADI85224.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 251 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 96/264 (36%), Positives = 139/264 (52%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C T+P+++RTR+SL I ++VDT PD Sbjct: 1 MKITILGSGTSTGVPMVGCTCSVCSSTDPRDKRTRASLLIEAAG-----RYILVDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE + IDAVL TH HADH++GID LRG+ +R I Y + + M + +F Y Sbjct: 56 RRQALREHIPHIDAVLLTHSHADHVNGIDDLRGFHFIHRRVIPCYGSRETMDAVLRNFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK +D Y P+++P VI + P + +PI HG + + G+R AY Sbjct: 116 IFKGMDVAGYAPLLDPHVIRD---PFALFGQ----TIVPIHLHHGTMPATGYRIDGAAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P S+ L LD L+IDAL+ H +HF++ +L + + PK I TH+ ++ Sbjct: 169 TDCSRIPESSVALLGGLDLLVIDALRYTPHENHFNIDGALGVVAELRPKRTIFTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 Y ++ P V A+DGM S Sbjct: 229 AYADGIR-LPEGVEFAYDGMTVSL 251 >gi|114770993|ref|ZP_01448433.1| hypothetical protein OM2255_02807 [alpha proteobacterium HTCC2255] gi|114548275|gb|EAU51161.1| hypothetical protein OM2255_02807 [alpha proteobacterium HTCC2255] Length = 263 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 105/268 (39%), Positives = 154/268 (57%), Gaps = 6/268 (2%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FTILGCG+S GVPR+ G WG CDP N KN R R SL I R + + T V++DT P Sbjct: 2 GELRFTILGCGSSGGVPRLGGHWGNCDPNNVKNFRKRCSLLIQRF-DNDNVTNVLIDTTP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L ++ +DAV+YTH HADH+HG+D LR + ++ + V+A+ + E F Sbjct: 61 DMRQQLLDAKIGKLDAVIYTHEHADHLHGLDDLRMIVINMQKRLPVFASKQTKNSILERF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y FK YPPI++ + + ++ AGG I+ HG I + +V Sbjct: 121 GYAFKTPKGSPYPPILDMNDL---PETLEIQGAGGPIKFTSFDVDHGNILVSAIKVNDVL 177 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y D++ ++ +L++LD+ I+D+L+ H SH +L ++L I+ PK AILT++HV Sbjct: 178 YTPDISTVRNDT--ELRDLDYWILDSLRYKPHPSHVNLEQALGLIDRYKPKKAILTNLHV 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLDY +L TP VVPA DG+Q + Sbjct: 236 DLDYLTLLNETPDNVVPAHDGLQIKLKV 263 >gi|198283235|ref|YP_002219556.1| beta-lactamase domain-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665996|ref|YP_002425467.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247756|gb|ACH83349.1| beta-lactamase domain protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518209|gb|ACK78795.1| metallo-beta-lactamase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 252 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 128/262 (48%), Gaps = 12/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+S G P I C +P+N R R+S+ + R ++VDTGPD Sbjct: 1 MKVVFLGTGSSAGTPVIACHCPVCCSDDPRNHRLRASILV-----RDEGVDLLVDTGPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR V S+ AVLYTH HADHI+G+D LR + Q+ I YA L FRY Sbjct: 56 RQQMLRAGVQSLTAVLYTHFHADHINGVDDLRAFNFAQEVVIPCYADERTAAELESRFRY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D P ++ I + G + PI HG + LG+RF +VAY Sbjct: 116 CFLPPDPAWAKPSLSMHRIVSPQT-------FGGVRVTPIPVLHGDLPILGYRFNDVAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P SLE L+ L L++D L+ H +H + E+ I + ILTHM D+ Sbjct: 169 TDLKTIPDASLELLRGLKVLVLDCLRYEYHPTHLHVEEARYWARRIGAERTILTHMTHDV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + P V+PA DGM Sbjct: 229 DYATLAAELPEGVIPASDGMVL 250 >gi|91216317|ref|ZP_01253284.1| putative hydrolase [Psychroflexus torquis ATCC 700755] gi|91185455|gb|EAS71831.1| putative hydrolase [Psychroflexus torquis ATCC 700755] Length = 258 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 87/270 (32%), Positives = 141/270 (52%), Gaps = 14/270 (5%) Query: 1 MKDY-YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 MK+ T LG G S GVP I D C NPK++R R S+ + + + ++D Sbjct: 1 MKNNVLKVTFLGTGTSQGVPIIGSDHPVCLSKNPKDKRLRVSVLLE-----WEDFSYVID 55 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 GPDF Q+L V ID +L+TH H DH+ G+D +R ++ +Q I +Y+ ++ L Sbjct: 56 CGPDFRQQMLANNVKKIDGILFTHEHNDHVIGLDDIRPFYFRQGN-ISIYSHKRVLESLK 114 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F+Y F+ + P ++ +I+ D P + G E IP+ H + GFRFG Sbjct: 115 QRFQYVFETENKYPGAPTLDTTIID--DSPFLI----GNKEVIPMNVYHPELQVYGFRFG 168 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + AY TD P E LEKL+ + L+++AL+ H SH +LS++L ++ + P+ A TH Sbjct: 169 DFAYVTDAKIIPDEELEKLKGVKTLVLNALRKEEHRSHLNLSQALDVVDYLKPERAYFTH 228 Query: 240 MHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + +D V P V ++D ++ Sbjct: 229 ISHHMGFHDDVQSELPEGVFLSYDNLKIEV 258 >gi|322417951|ref|YP_004197174.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320124338|gb|ADW11898.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 251 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 142/264 (53%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C ++P+++RTR+S+ + +R ++VDT D Sbjct: 1 MKITILGSGTSTGVPMVGCHCQVCGSSDPRDKRTRASILVESCGQR-----ILVDTSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q LRE + IDAVL TH HADHIHGID LRG+ +R I YA+ D M + +F Y Sbjct: 56 RVQALREGIPQIDAVLLTHTHADHIHGIDDLRGFHFIHRRVIPCYASRDTMDKVRANFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ L Y P++ +E+ P + P+ HG + G+RF N AY Sbjct: 116 IFEGLSSEGYSPLLESFPVED---PFDLFGC----RITPVPISHGSFLATGYRFDNAAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P +SL LQ LD +IIDAL+ H +HF++ +LK E++ P+ +LTH+ ++ Sbjct: 169 TDCSEIPEQSLPLLQGLDLMIIDALRFSPHPNHFNIEGALKMSEILKPRRTLLTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + P V A+DG+ Sbjct: 229 HHSDGQR-LPQGVEFAYDGLTVEL 251 >gi|198275439|ref|ZP_03207970.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] gi|198271068|gb|EDY95338.1| hypothetical protein BACPLE_01603 [Bacteroides plebeius DSM 17135] Length = 265 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 127/266 (47%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP++ C ++P++ R R S + + +++D GPDF Sbjct: 1 MKITILGSGTSTGVPQVGCTCKVCTSSDPRDNRLRCSGLVEV-----NGVRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR +ID VL TH H DH+ G+D LR + + R I VYA L Sbjct: 56 REQMLRLNDFRAIDGVLITHEHYDHVGGLDDLRPFC--KFRDIPVYAEDYTATRLKNRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF + P + I+ + + AG +E IP HG++ +GFR G +A+ Sbjct: 114 YCF-TENLYPGVPHIPLNYIKEGEPFVVSNVAGNQVEVIPFRVMHGKLPIMGFRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P S + L+ LD L+++AL+ H +H SLS +L++ I HM Sbjct: 173 ITDMLHLPESSYDYLKGLDCLVMNALRIEYHWTHQSLSAALEQTVRIAAGKTYFIHMSHQ 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + V + P V A+DG+ Sbjct: 233 IGLHAEVQEQLPENVFLAYDGLVIEL 258 >gi|265751142|ref|ZP_06087205.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] gi|263238038|gb|EEZ23488.1| metal-dependent hydrolase [Bacteroides sp. 3_1_33FAA] Length = 258 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 121/266 (45%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S I +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I I G +E P+ HG++ LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H++H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHNTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P V A+DGM+ S Sbjct: 233 MGLHADAERLLPPHVHFAYDGMRISL 258 >gi|168702138|ref|ZP_02734415.1| hypothetical protein GobsU_21600 [Gemmata obscuriglobus UQM 2246] Length = 265 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 97/267 (36%), Positives = 147/267 (55%), Gaps = 17/267 (6%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT LG G S+GVP + D C NP+N R R S+ +S + +++DT P+ + Sbjct: 11 FTFLGTGTSMGVPMLGCDCHVCTSDNPRNHRYRCSVLVS-----NAQGNLLIDTAPEMRL 65 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LRE V + AV YTH H DH+ G+D LR + +K P+ +Y + + ++F Y F Sbjct: 66 QLLRENVKLVHAVAYTHYHVDHLFGLDDLRIFPVKLNGPLPMYCTDETEAIIRQAFAYVF 125 Query: 127 KALDDRTYP----PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 A +P P ++ I+ + + P+ HGR + LGFR GNVA Sbjct: 126 -APGSEDFPLGMLPRLDLRRIDERPFEVLGE------TVTPVPLIHGRFNVLGFRIGNVA 178 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIELINPKNAILTHMH 241 YCTDV+ P S L+ LD +IDAL+ G H SHF L ++L+ I + PK A LTHM Sbjct: 179 YCTDVSHIPDRSWPLLEGLDVFVIDALRPGKPHPSHFGLDQALEVIAKVKPKKAYLTHMA 238 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++Y+ ++++ P V PA+DG++F+ Sbjct: 239 HTMEYEELMRTLPPNVEPAYDGLKFTF 265 >gi|302340156|ref|YP_003805362.1| beta-lactamase [Spirochaeta smaragdinae DSM 11293] gi|301637341|gb|ADK82768.1| beta-lactamase domain protein [Spirochaeta smaragdinae DSM 11293] Length = 265 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 98/271 (36%), Positives = 138/271 (50%), Gaps = 12/271 (4%) Query: 1 MKDYY-HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 MK TILG G S GVP I C NPKN R+R+S + + ++ D Sbjct: 1 MKQSSCTVTILGSGTSHGVPVIACICPVCRSKNPKNHRSRASALVRGA----EDEVILFD 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T P+F +Q LRE + IDAV YTH HADH+HG+D LR PI +Y + + M + Sbjct: 57 TAPEFRLQALREGIAHIDAVFYTHAHADHLHGLDDLRPLSFN--GPIPLYGSAETMDEIR 114 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F + + P V I D G +E IPI HG + G+R G Sbjct: 115 RRFSYIFSSGQEGGGKPKVLLKPIGPED-----HITIGSLEVIPIPLLHGSLPVFGYRIG 169 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 AY TD N P S E L+ + F++IDAL+ H +HFS ++L+ + I + A TH Sbjct: 170 PFAYLTDCNIIPEYSYELLEGIRFVVIDALRPEPHPTHFSFGQALEAVRKIGAEKAWFTH 229 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 + D+D++ + + P+ V PA+DG+ F I Sbjct: 230 LTHDVDHEDIRRMLPTGVEPAWDGLSFRVDI 260 >gi|91200847|emb|CAJ73901.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 254 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I + C NPKN+R R+S+ + +++D P+ Sbjct: 2 MEVIFLGTGTSHGVPMIACNCKVCTSDNPKNKRMRTSVLVCENGCD-----ILIDATPEM 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q ++ V +DAVL TH HADHI G+D LR + + Q++ I +Y PD ++ + F Y Sbjct: 57 RLQCIKNNVTRLDAVLITHIHADHIFGLDDLRRFNIVQRKDIPIYGTPDTLEGIKRIFAY 116 Query: 125 CFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F + Y P + I+ N G +PI HG G+RF AY Sbjct: 117 AFDIRAKNDGYVPRFSLNAIDGN-------VKIGGFSIVPIDAIHGNGLVTGYRFERFAY 169 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TDV+ P SL KL NLD L++ AL+ H+ HF++ ++L + + P+ TH+ D Sbjct: 170 ITDVSEIPDHSLAKLMNLDVLVLGALRYTPHAKHFNIDQALDIVSKVRPQKTYFTHICHD 229 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 ++++ P V A+DG++ Sbjct: 230 IEHESTNSRLPENVELAYDGLRIKL 254 >gi|148262634|ref|YP_001229340.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146396134|gb|ABQ24767.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 251 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 97/262 (37%), Positives = 148/262 (56%), Gaps = 13/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C +P+++RTR+S+ + ++VDT D Sbjct: 1 MKITILGSGTSTGVPMVGCSCPVCSSEDPRDKRTRASIIVECSG-----KYILVDTSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q +RE++ IDAVL+TH HADHIHGID LRG+ R I Y + D ++ + +F Y Sbjct: 56 RKQAIRERIPHIDAVLFTHSHADHIHGIDDLRGFHFIHHRVIPCYGSEDSIETIARNFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK ++ Y P++ P V+ + ++ G I+ IP+L HG + + G+RF ++AY Sbjct: 116 IFKGMETAGYSPLLEPHVVNDR-----IELFGCAIDPIPLL--HGTMPATGYRFNDMAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P S KL L LIIDAL+ H +HF++ +L+ +E + P+ A+LTH+ ++ Sbjct: 169 TDCSAIPDHSRAKLGGLKLLIIDALRYTPHPNHFNIEGALQVVEKLRPERAVLTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 Y K P+ V A+DGM Sbjct: 229 PYRDGEK-LPAGVEFAYDGMTI 249 >gi|212694000|ref|ZP_03302128.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|237723872|ref|ZP_04554353.1| metal-dependent hydrolase [Bacteroides sp. D4] gi|212663532|gb|EEB24106.1| hypothetical protein BACDOR_03525 [Bacteroides dorei DSM 17855] gi|229437698|gb|EEO47775.1| metal-dependent hydrolase [Bacteroides dorei 5_1_36/D4] Length = 258 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 120/266 (45%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S I +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I I G +E P+ HG++ LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P V A+DGM+ S Sbjct: 233 MGLHADAERLLPPHVHFAYDGMRISL 258 >gi|77917815|ref|YP_355630.1| phosphonate metabolism [Pelobacter carbinolicus DSM 2380] gi|77543898|gb|ABA87460.1| phosphonate metabolism [Pelobacter carbinolicus DSM 2380] Length = 286 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 89/267 (33%), Positives = 139/267 (52%), Gaps = 12/267 (4%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + +LG G S GVP + + C ++P++RRTR S IS +++DTG Sbjct: 4 SQTMNIVLLGTGTSTGVPMLGCNCDVCRSSDPRDRRTRCSALIS-----WGARNILIDTG 58 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + Q LRE + +D VLYTH HADH+HGID LR + + K I ++ +P M + + Sbjct: 59 TDLHQQALRESLTHVDGVLYTHAHADHVHGIDDLRAFNMVSKESIPIFGSPATMSVIRRN 118 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F + P ++P DV G +E P+ QHG + G+R G Sbjct: 119 FSYIFDTQGGVGFRPRLDP-----WDVRGPFSLFGLPVE--PVAMQHGPGEASGYRIGPF 171 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TD N P SLE L+ L+ L++D L+ H +HFS+ E++K + + + +LTH+ Sbjct: 172 AYLTDCNVIPEASLEHLRGLEVLVLDGLRFRSHPTHFSIDEAIKLAQRLGARRTLLTHIC 231 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ + + P + A+DG +FS Sbjct: 232 HEVSHARDSRDLPPGIELAYDGQRFSL 258 >gi|225874891|ref|YP_002756350.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] gi|225791495|gb|ACO31585.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] Length = 263 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 98/268 (36%), Positives = 143/268 (53%), Gaps = 7/268 (2%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILG G S+GVP + C T+P+NRR R S+ + E G+ V++DTGPD Sbjct: 2 QAEIVILGSGTSMGVPTLGCTCAVCTSTDPRNRRMRPSIAVEWQWE-GAPRRVLIDTGPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESF 122 F Q LR V +DAV YTHPHADHI G+D LR + + + +YA + + L F Sbjct: 61 FREQALRSGVHHVDAVFYTHPHADHILGLDDLRPLSFRHRPNYLPLYADANTARILERVF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F V I+ +D + AG + +P+ QHG + GFRFGN A Sbjct: 121 EYTFSPASQYPTRARVQLFPIDGHD---TTQVAGAAFQRVPL--QHGNVEVSGFRFGNAA 175 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ + P SL L+ LD +I+DAL+ H SH +L E+L +E++ P+ A THM Sbjct: 176 YLTDMKSIPDASLPLLEGLDVMILDALRPQEHPSHANLEEALHWVEVVKPRQAWFTHMSH 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 ++D++ + P V ++DG++ I Sbjct: 236 EIDHEATEATFPPHVRLSYDGLRIPIEI 263 >gi|237710334|ref|ZP_04540815.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] gi|229455796|gb|EEO61517.1| metal-dependent hydrolase [Bacteroides sp. 9_1_42FAA] Length = 258 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 121/266 (45%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S I +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCLVCTSSDPRDNRLRCSGLIET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I I G +E P+ HG++ LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPGSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H++H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHNTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P V A+DGM+ S Sbjct: 233 MGLHADAERLLPPHVHFAYDGMRISL 258 >gi|325103600|ref|YP_004273254.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] gi|324972448|gb|ADY51432.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] Length = 254 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C N K++R RSS+ I TTV++DTGPDF Sbjct: 1 MKVTFLGTGTSQGVPVIACSCPVCLSKNKKDKRLRSSILIE-----SGTTTVVIDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR+ V S+DAV++TH H DHI G+D +R + KQ+ ++VYA + + L F Y Sbjct: 56 RYQMLRKNVQSLDAVVFTHEHKDHIAGLDDVRAFNYKQQSAMEVYATDNVQQSLKREFYY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F P++N I+ ++ G I+ +P+ H ++ LGFR + Y Sbjct: 116 VFSEFK-YPGIPLLNLHTIDKDEA-----FEIGDIKFMPVEVMHYKLPVLGFRINDFVYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD E K++ FL+++AL+ H SH + E++ + + TH+ L Sbjct: 170 TDAKTISNEEFGKIEGAKFLVLNALQKENHISHLTFQEAIDLANRVKADHTFFTHISHKL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 Y+ V K + A+DG++ + Sbjct: 230 GKYEDVSKELQPNISLAYDGLEINI 254 >gi|312143854|ref|YP_003995300.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] gi|311904505|gb|ADQ14946.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] Length = 251 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I D C NPKN+R R+S+ I + + +++DT P+ Sbjct: 1 MQITFLGTGTSHGVPVIACDCKTCQSNNPKNKRKRTSIYI-----KSNEYNLLIDTPPEM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q+L ++ +D+VL TH HADHI G D +R Q + + +Y+ P+ + H+ F Y Sbjct: 56 RLQLLENKIKDVDSVLMTHAHADHIMGFDDIRALNWYQNKAMPIYSNPETLAHIKRIFPY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P + ++ + + G ++ + HG+ L +R N AY Sbjct: 116 IFAENNAGGVPQV----ILREVEQSFTL----GDLKIKAVPIYHGKNKILAYRINNFAYL 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P +S + L+ +D+ IDAL+ H +H S+ ++++ + + K+ LTH+ L Sbjct: 168 TDCSKIPEKSFKLLEGIDYAAIDALRYTEHPTHMSVDQAVELVNKLGLKHGYLTHISHRL 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 +++ + P V PA+DG+ Sbjct: 228 EHEDLANYLPKNVSPAYDGLTIEV 251 >gi|313674947|ref|YP_004052943.1| metal-dependent hydrolase [Marivirga tractuosa DSM 4126] gi|312941645|gb|ADR20835.1| metal-dependent hydrolase [Marivirga tractuosa DSM 4126] Length = 253 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 133/265 (50%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I D C + +++RTR+S+ I +++ DTGPDF Sbjct: 1 MKVTFLGTGTSQGVPVIACDCEVCRSLDYRDKRTRTSIHIEI-----EGKSIVFDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE+V ++DAV+YTH H DH G+D +R Y KQ + VY ++ + F Y Sbjct: 56 REQMLRERVSNLDAVVYTHEHKDHTAGLDDVRSYNFKQDMDMPVYGRKQVLEQIQREFAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F A YP I + E + P ++ I+ +PI H ++ G+R + Y Sbjct: 116 IFAA---NKYPGIPKVKLHEIENKPFQVEG----IDILPINVMHYKLPVFGYRIKDFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDVN P E EK++ L++ AL+ H SHF+L +++ +E + A HM + Sbjct: 169 TDVNHIPEEEKEKIRGSKILVLSALQKKSHLSHFNLEQAIAMVEELEIPQAYFIHMGHRM 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P + A+DG+Q Sbjct: 229 GLHRNIEEELPEGMELAYDGLQIEL 253 >gi|294778355|ref|ZP_06743778.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] gi|294447617|gb|EFG16194.1| metallo-beta-lactamase domain protein [Bacteroides vulgatus PC510] Length = 258 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 120/264 (45%), Gaps = 10/264 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S + +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I + I G +E P+ HG++ LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGRMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + + P V A+DGM+ Sbjct: 233 IGLHADAERLLPPHVHFAYDGMKI 256 >gi|146300197|ref|YP_001194788.1| beta-lactamase domain-containing protein [Flavobacterium johnsoniae UW101] gi|146154615|gb|ABQ05469.1| beta-lactamase domain protein [Flavobacterium johnsoniae UW101] Length = 254 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G S G+P I D C T+ K++R R S+ I+ + ++D GPDF Q+ Sbjct: 5 FLGTGTSQGIPIIGIDHPVCKSTDAKDKRLRVSIWIT-----WEEHSYVIDCGPDFRQQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L +DA+L+TH H+DH G+D +R + +Q I +Y + +L F Y F+ Sbjct: 60 LSCGCRKLDAILFTHEHSDHTAGLDDIRPFNFRQGE-IPIYGHKRVLDNLRRRFDYVFET 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ P V I ++NN+ A G AIPI HG + G+R + AY TDV Sbjct: 119 VNKYPGAPSVKTIEVKNNE-----PFAVGDKTAIPINAMHGDLQVFGYRIQDFAYLTDVK 173 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 ++KL+ L L+++AL+ H +HF+L E+L I L+ P+ A LTH+ L ++ Sbjct: 174 TIEQAEIDKLKGLKVLVVNALRVEPHDTHFNLQEALDFINLVKPEKAYLTHISHVLGFHE 233 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 V K P V A+D ++ + Sbjct: 234 EVQKQLPENVFLAYDNLEITI 254 >gi|327402038|ref|YP_004342876.1| metal-dependent hydrolase [Fluviicola taffensis DSM 16823] gi|327317546|gb|AEA42038.1| metal-dependent hydrolase [Fluviicola taffensis DSM 16823] Length = 257 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 14/270 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + TILG G S G+P I D C ++ R R S+ + ++D Sbjct: 1 MK--FSATILGSGTSQGIPVIACDCHVCTSQKVEDNRLRCSVLLEI-----EGKNYVIDA 53 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L+ QV +++AVL+TH H DH+ G+D +R + K+ R +D+Y + L Sbjct: 54 GPDFRQQMLKFQVKNLEAVLFTHEHKDHMAGLDDVRAFNFKESRDMDIYCTKAVEEALRR 113 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + Y F ++ YP I +I + P + + I +P+ H + LGFR G+ Sbjct: 114 EYHYAF---EEDKYPGIPQLNIITIENEPFRLSN---TIPIVPVEVMHYFMPVLGFRIGD 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TD A+ +EKL+ + LI++AL+ H SHF+L E+L I+ + P+ A LTH+ Sbjct: 168 FAYITDAKTVSAKEIEKLKGVKVLIVNALRKEPHISHFNLEEALHFIQEVKPEKAYLTHI 227 Query: 241 HVDLD-YDMVLKSTPSRVVPAFDGMQFSSP 269 + + P V A+DG++F Sbjct: 228 SHLFGTHAEIESELPENVFAAYDGLKFDFE 257 >gi|150004778|ref|YP_001299522.1| putative hydrolase [Bacteroides vulgatus ATCC 8482] gi|149933202|gb|ABR39900.1| metal-dependent hydrolase [Bacteroides vulgatus ATCC 8482] Length = 258 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S I +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLIET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLNDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I + I G +E P+ HG++S LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLSILGYRIGRMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + + P V A+DGM+ Sbjct: 233 IGLHADAERLLPPHVHFAYDGMKI 256 >gi|225012763|ref|ZP_03703197.1| beta-lactamase domain protein [Flavobacteria bacterium MS024-2A] gi|225003037|gb|EEG41013.1| beta-lactamase domain protein [Flavobacteria bacterium MS024-2A] Length = 254 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 91/266 (34%), Positives = 132/266 (49%), Gaps = 14/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G+P I + C NPK++R R S+ I + V+VD GPDF Sbjct: 2 LKIHFLGTGTSQGIPVIGSNHPVCLSPNPKDKRLRVSILIQ-----WEHANVVVDCGPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR ++DAVL+TH HADH GID +R +F KQ I V+ + + +L + F Y Sbjct: 57 RQQMLRVNCETLDAVLFTHEHADHTAGIDDIRPFFFKQG-DIPVFGSKRVLDNLSQRFDY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V +E P + +PI H +I LG+R + AY Sbjct: 116 IFSKENKYPGAPSVLVNKVEA---PFDFMNK----VVVPINVMHNQIPVLGYRIDDFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV +EKL+ LD L++ AL+ H +H +L E+L I+ I PK LTH+ + Sbjct: 169 TDVKTIKPSEIEKLKGLDLLVLSALQIKTHPNHLNLDEALNLIQKIAPKRCYLTHISHFM 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSSP 269 +D V + P V A+D + +S Sbjct: 229 GFHDEVSEKLPPNVFLAYDTLTITSE 254 >gi|224824704|ref|ZP_03697811.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] gi|224603197|gb|EEG09373.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] Length = 258 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 93/268 (34%), Positives = 138/268 (51%), Gaps = 12/268 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LGCG+S G P I D C +P+NRR+R+S + R +T ++DTGP Sbjct: 2 SSVELTVLGCGSSSGTPAIGCDCPTCTSPDPRNRRSRASAYL-----RVGDTAFLIDTGP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q LRE + +DAVLYTHPHADH++GID LR + +K I ++ + ++ F Sbjct: 57 DLRHQALREGITRVDAVLYTHPHADHLNGIDDLRAFCYVKKGAITLFGNSFTLANVRSRF 116 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y A P++ + G + PI HG LG+R G+VA Sbjct: 117 DYALHAPSKAWDKPVLLT-------EEVGGPFGFGGVTVTPIPLMHGSWPCLGWRIGDVA 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + TD++ P SLEKLQ L+ L +D L+ + SH +++SL+ E I + IL HM Sbjct: 170 WLTDLSDIPEHSLEKLQGLEVLFLDCLRREPYPSHLCVADSLRWAERIGARRTILIHMTH 229 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 L+Y + P V +DG++ S P+ Sbjct: 230 GLEYHALSAECPPGVEVGYDGLKVSVPL 257 >gi|253572233|ref|ZP_04849636.1| hydrolase [Bacteroides sp. 1_1_6] gi|251838008|gb|EES66096.1| hydrolase [Bacteroides sp. 1_1_6] Length = 252 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP+I C +PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRILGSGTSTGVPQIGCTCPVCTSADPKDNRLRASAIVET-----EDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RAQVLHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GAVPIYAEEYVARALRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ I + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEIEIGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L+ +D LI++AL+ H +H +L E+LK E I K HM D+ Sbjct: 168 TDMLTMPEESYEQLEGIDVLIMNALRIAPHPTHQNLEEALKAAERIRAKETYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V K P + +DGM+ Sbjct: 228 GLHKKVEKELPENIHLTYDGMEI 250 >gi|29346777|ref|NP_810280.1| putative hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|29338674|gb|AAO76474.1| hydrolase, metal-dependent [Bacteroides thetaiotaomicron VPI-5482] Length = 252 Score = 310 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP+I C +PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRILGSGTSTGVPQIGCTCPVCTSADPKDNRLRASAIVET-----EDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RAQVLHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GAVPIYAEEYVARALRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ + + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEIEVGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L+ +D LI++AL+ H +H +L E+LK E I K HM D+ Sbjct: 168 TDMLTMPEESYEQLEGIDVLIMNALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V K P + +DGM+ Sbjct: 228 GLHKKVEKELPENIHLTYDGMEI 250 >gi|32477197|ref|NP_870191.1| phnP protein homolog- hydrolase [Rhodopirellula baltica SH 1] gi|32447748|emb|CAD77266.1| phnP protein homolog-putative hydrolase [Rhodopirellula baltica SH 1] Length = 283 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 13/267 (4%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G S+GVP I + C T+P N RTR S+ I R +++DT PD Sbjct: 24 EVIFLGTGTSVGVPAIGCECDVCQSTDPHNNRTRCSILI-----RLPEGNLLIDTPPDLR 78 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE+V + AVL+TH HADHI+G+D LR + + RP+ +Y D + S+ Y Sbjct: 79 TQLLREKVKLVHAVLFTHEHADHIYGLDDLRLFPFRLGRPVPLYCRADVEARIRTSYDYA 138 Query: 126 FKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGNVA 182 F + P + + I NND P + + P+ +HG LGFR G+ A Sbjct: 139 FSQREQTHAGSRPQLEILSI-NNDDPFEVLG----VRVTPVPLKHGPHFEVLGFRMGDFA 193 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTD N S+++L+ LD L++DAL+ H +HF++ E+L+ IE + P+ A LTH+ Sbjct: 194 YCTDTNHISETSMDRLRGLDTLVLDALRFTPHPTHFNIDEALEVIEELKPRQAFLTHLGH 253 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 D+D+ V S P V A+DG++ P Sbjct: 254 DIDHGPVEASLPDHVHLAYDGLRLPMP 280 >gi|78221985|ref|YP_383732.1| Beta-lactamase-like [Geobacter metallireducens GS-15] gi|78193240|gb|ABB31007.1| Beta-lactamase-like protein [Geobacter metallireducens GS-15] Length = 264 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 143/264 (54%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C ++PK++RTRSS+ I ++VDT PD Sbjct: 14 MKITILGSGTSTGVPMVGCHCPVCSSSDPKDKRTRSSIMIETAG-----KYILVDTSPDL 68 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LR+++ IDAVL THPHADHI+GID LRG+ +R I + + M+ + +F Y Sbjct: 69 RRQALRQRIPYIDAVLLTHPHADHINGIDDLRGFHFIHRRVIPCHGSRTTMEAVQRNFSY 128 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ L+ Y P++ ++ + P + +PI HG + + G+R AY Sbjct: 129 IFRGLEVVGYSPLMEAHIV---NEPFALFGQ----SIVPIHLYHGAMPATGYRIDGAAYL 181 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P SL L LD LI+DAL+ H +HF++ +L+ +E + PK AILTH+ ++ Sbjct: 182 TDCSRIPDSSLSLLTGLDILIMDALRYTPHENHFNIEGALRIVEQLKPKRAILTHLTHEV 241 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + P V A+DGM+ + Sbjct: 242 AHGDESR-LPEGVEFAYDGMEIAL 264 >gi|315499859|ref|YP_004088662.1| metal-dependent hydrolase [Asticcacaulis excentricus CB 48] gi|315417871|gb|ADU14511.1| metal-dependent hydrolase [Asticcacaulis excentricus CB 48] Length = 269 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 99/268 (36%), Positives = 142/268 (52%), Gaps = 4/268 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN--TTVIVDTG 61 TILG G S GVPR G WG CDP NPKNRR+R S T V+VDT Sbjct: 3 RLRTTILGSGCSTGVPRADGFWGRCDPCNPKNRRSRCSALFQAFDPLSPEQTTNVVVDTS 62 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q+++ + +DAVL+TH HAD HGID +R + L +K + Y + L Sbjct: 63 PDFRTQIMQTGINHLDAVLWTHDHADQTHGIDDMRAFALLRKMQVPGYMDEATRQTLLSR 122 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F YPPI P+ + + GG + + Q HG I S+G+R G+V Sbjct: 123 FDYIFAG--KFGYPPICAPMALPLFGETFHLTGEGGEVPVVTFDQIHGPIRSVGYRIGDV 180 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY +D++ P +S L L ++DAL+ H +H L +L+ I + P+ A+LT++H Sbjct: 181 AYSSDISDLPEDSFAHLYGLKVWVVDALRYSPHPTHAHLDLALEWIARVKPELAVLTNLH 240 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 ++DY+ + + P VVPA+D M + Sbjct: 241 QEMDYEELRANLPDGVVPAYDQMVIDTE 268 >gi|254883016|ref|ZP_05255726.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|319641860|ref|ZP_07996537.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] gi|254835809|gb|EET16118.1| metal-dependent hydrolase [Bacteroides sp. 4_3_47FAA] gi|317386533|gb|EFV67435.1| metal-dependent hydrolase [Bacteroides sp. 3_1_40A] Length = 258 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C ++P++ R R S + +++D GPDF Sbjct: 1 MKITILGSGTSTGVPEIGCKCPVCTSSDPRDNRLRCSGLVET-----EGLRILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R + +D VL TH H DH+ G+D LR + R + VYA + L + Sbjct: 56 REQMIRLDDFKPLDGVLITHEHYDHVGGLDDLRPFCRF--RDVPVYAEQYTAERLRQRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + I + I G +E P+ HG++ LG+R G +A+ Sbjct: 114 YCFAEH-LYPGVPRITLEEIVPDSPFIIGNPEGNKVEVTPLRVMHGKLPILGYRIGRMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ P + LQ LD L+++AL+ H +H +L E+L + I HM Sbjct: 173 ITDMLTMPGAEYDLLQGLDVLVMNALRPQPHHTHQNLKEALDNAQRIGAGETYFIHMSHH 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + + P V A+DGM+ Sbjct: 233 IGLHADAERLLPPHVHFAYDGMKI 256 >gi|116620959|ref|YP_823115.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224121|gb|ABJ82830.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 261 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 137/263 (52%), Gaps = 11/263 (4%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G S+GVP I C + +++R R S+ +S + V++DT PD Sbjct: 7 KITVLGSGTSVGVPTIGCHCDVCTSQDARDKRLRPSVLVSF-----DDRNVLIDTTPDLR 61 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q LR ++ +DAVL+TH HADH+ G+D +R + +QK I ++A+P+ M + F+Y Sbjct: 62 TQALRARIERLDAVLFTHSHADHLMGLDDVRPFNFRQKGQIPIFASPETMAAVQRCFQYI 121 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + P ++ V++ + +E PI HG + GFRFG AY T Sbjct: 122 FDNGKKESNVPKLDARVLDGTPFDVF------GMEFTPIPILHGSQTIYGFRFGGAAYLT 175 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D + P S+E L+ LD L +DAL+ H +H ++ S++ ++ + P A TH+ DL Sbjct: 176 DHSDIPESSMEMLKGLDVLFLDALRYKPHPTHSTVERSIRTVDQLAPHRAFFTHICHDLG 235 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 ++ P + A+DG++ Sbjct: 236 HERAESMLPPHIRLAYDGLEIQV 258 >gi|325279424|ref|YP_004251966.1| beta-lactamase domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311233|gb|ADY31786.1| beta-lactamase domain protein [Odoribacter splanchnicus DSM 20712] Length = 263 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 13/266 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S G+P I D C +P ++R R+S + +I+D GPDF Sbjct: 1 MKLTILGSGTSQGIPVIACDCPVCRSADPHDKRLRASAMLDIKG-----KKIIIDAGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR QV + A+L TH H DHI G+D +R + ++ +DVY + +++ F Y Sbjct: 56 RYQMLRSQVKDLRAILLTHGHKDHIGGLDDVRAFNWVKQGAVDVYGNEGTREVVYKDFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F A YP + +D P + I+ +PI H ++ LGFR GN AY Sbjct: 116 AFAAF---RYPGVPEINYHVIDDRPFYID----DIQVVPIPVLHYKMPVLGFRIGNFAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD PA S+E+L+ +++L+I+AL+ LH SHF+L E+L I I PK+A LTH+ + Sbjct: 169 TDAKTIPASSMERLKGVEYLVINALRKELHMSHFNLEEALTMIARIQPKSAFLTHIGHQM 228 Query: 245 DY-DMVLKSTPSRVVPAFDGMQFSSP 269 V K P +V A+D ++ P Sbjct: 229 GLSAEVSKELPVQVKLAYDTLEIEIP 254 >gi|327540508|gb|EGF27090.1| metallo-beta-lactamase family protein [Rhodopirellula baltica WH47] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 95/267 (35%), Positives = 143/267 (53%), Gaps = 13/267 (4%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G S+GVP I + C T+P N RTR S+ I R +++DT PD Sbjct: 24 EVIFLGTGTSVGVPAIGCECDVCQSTDPHNNRTRCSILI-----RLPEGNLLIDTPPDLR 78 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LRE++ + AVL+TH HADHI+G+D LR + + RP+ +Y D + S+ Y Sbjct: 79 TQLLREKIKLVHAVLFTHEHADHIYGLDDLRLFPFRLGRPVPLYCRADVEARIRTSYDYA 138 Query: 126 FKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGNVA 182 F + P + + I N+D + P+ +HG LGFR G+ A Sbjct: 139 FSQREQTHAGSRPQLEILSINNDDS-----FEVLGVHVTPVPLKHGPHFEVLGFRMGDFA 193 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTD N S+++L+ LD L++DAL+ H +HF++ E+L+ IE + P+ A LTH+ Sbjct: 194 YCTDTNHISETSMDRLRGLDTLVLDALRFTPHPTHFNIDEALEVIEELKPRQAFLTHLGH 253 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 D+D+ V S P V A+DG++ P Sbjct: 254 DIDHGPVEASLPDHVHLAYDGLRLPMP 280 >gi|255690069|ref|ZP_05413744.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] gi|260624346|gb|EEX47217.1| lipoate-protein ligase B [Bacteroides finegoldii DSM 17565] Length = 252 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 I+G G S GVP+I C +PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRIIGSGTSTGVPQIGCTCAVCTSADPKDNRLRASAIVET-----EDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + Q + +YA + L Y Sbjct: 56 REQVLHLPFEKIDGVLITHEHYDHVGGLDDLRPFC--QFGSVPIYAEEYVARGLRSRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + +YP + N I ++ E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---EHSYPGVPN---IPLQEIVAGQPFYINHTEVLPLRVMHGRLPILGYRIGKLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D LI++AL+ H +H +L +L I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGVDVLIVNALRIAPHPTHQNLEAALAVARRIQAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + + P + AFDG++ Sbjct: 228 GLHAEAERRLPENIHLAFDGLEI 250 >gi|149275712|ref|ZP_01881857.1| metal-dependent hydrolase [Pedobacter sp. BAL39] gi|149233140|gb|EDM38514.1| metal-dependent hydrolase [Pedobacter sp. BAL39] Length = 254 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 13/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P IT C + KN+R R S+ I + T+++D+GPDF Sbjct: 1 MKVTFLGTGTSQGIPVITCQCVVCQSDDHKNKRLRVSVLIET-----DDKTIVIDSGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR +V +DA+L+TH H DH+ G+D +R + K+ ID+YA L F Y Sbjct: 56 RYQMLRAKVKDLDAILFTHEHKDHVAGLDDIRPFNYLLKKNIDIYATERVQDALKREFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + YP + + + P + G E IP+ H ++ LG+R G+ Y Sbjct: 116 IFS---EHHYPGLPQIDIHTITNEPFFI----GKTEIIPLDIMHYKLPILGYRIGDFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD S+EK+ L+++AL++ H SHF+L E++ I + TH+ +L Sbjct: 169 TDAKTISETSVEKVMGTKILVVNALQHEQHISHFTLQEAIDFSARIGAEQTYFTHISHNL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 ++ V K P V A+DG+ Sbjct: 229 GLHEDVEKELPKNVKLAYDGLTI 251 >gi|320105944|ref|YP_004181534.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] gi|319924465|gb|ADV81540.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] Length = 271 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 100/270 (37%), Positives = 143/270 (52%), Gaps = 8/270 (2%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR--VSERGSNTT---VIVDT 60 T LG G S+GVP + C T+P+N R R S+ I SER ++ V++DT Sbjct: 4 SLTFLGSGTSMGVPTLGCTCAVCTSTDPRNNRMRPSVAIRFHEASERNADARERLVLIDT 63 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G +F +Q LR+ +L +DAVLYTHPHADHI G+D LR K P +YA D + + Sbjct: 64 GQEFRIQALRDHILRVDAVLYTHPHADHILGLDDLRPLTFKNATPTPLYADADTIATIRR 123 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F Y F+ + YP ++E VP GV+ + HGR GFRFG+ Sbjct: 124 IFDYTFRT--ENRYPTSARVELVEIPTVPGTTIDIHGVL-FERVAVIHGRSEITGFRFGS 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TD++ +S+++L NLD LI+DAL+ H SH L +S+ + I K TH+ Sbjct: 181 AAYLTDMSDLSEDSIKRLANLDILILDALRREPHPSHSHLDKSIALAQRIGAKRTYFTHI 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 DLD+ V P+ + A+DG++ I Sbjct: 241 SHDLDHGPVSAELPAGIYLAYDGLRLEFEI 270 >gi|118581813|ref|YP_903063.1| beta-lactamase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504523|gb|ABL01006.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379] Length = 255 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 96/265 (36%), Positives = 136/265 (51%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP + C +P++ RTR+SL I ++VDT D Sbjct: 1 MKCIILGSGTSTGVPMVGCGCAVCSSDDPRDVRTRASLLIRH-----GGKNILVDTATDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE+V IDAVL+THPHADH++GID LRG+ KR + +A+ L F Y Sbjct: 56 RHQALREKVRHIDAVLFTHPHADHVNGIDDLRGFHFLHKRVVPCFASAATFATLMNGFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + +Y P++ I P + + IP+ HG IS+LG+R GN AY Sbjct: 116 IFREHEGSSYTPLLKAHNISA---PFELFG----LTVIPVPLTHGAISALGYRIGNFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N P SL L L+ L+ID L+ H SHF++ ++ + + P ILTH+ D+ Sbjct: 169 TDCNEIPQSSLPLLWGLEILVIDGLRWNPHPSHFNIETAIAAVSRLRPGRTILTHLSHDV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 Y ++ PS A+DGM+ Sbjct: 229 LYSDGVR-LPSGFEFAYDGMELELE 252 >gi|325298133|ref|YP_004258050.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317686|gb|ADY35577.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 259 Score = 308 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 127/266 (47%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP++ C T+P ++R R S I R +++D GPDF Sbjct: 1 MKITVLGSGTSTGVPQVGCTCPVCTSTDPHDKRLRCSGLIETQGVR-----ILIDCGPDF 55 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q LR ID VL TH H DH+ G+D LR + R + VYA L Sbjct: 56 REQSLRLPDFQPIDGVLITHEHYDHVGGLDDLRPFCHF--RDVPVYAEQYTADRLKTRIP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF P + +E AG +E +P+ HGR+ LGFR G +A+ Sbjct: 114 YCFAEHP-YPGVPRIPLAEVEPYVPFKVTGGAGQEVEVVPLRVIHGRLPILGFRIGKMAW 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ PAE+ L+ LD L ++AL+ H +H SLS++L+++E I P+ A H Sbjct: 173 ITDMTEMPAETYACLEGLDCLFMNALRLTPHPTHQSLSQALEQVERIRPRKAYFIHASHQ 232 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 L + V + P V A+DG+ Sbjct: 233 LGMHAEVEATLPPHVRLAYDGLTVEI 258 >gi|150025171|ref|YP_001295997.1| PhnP protein [Flavobacterium psychrophilum JIP02/86] gi|149771712|emb|CAL43186.1| PhnP protein [Flavobacterium psychrophilum JIP02/86] Length = 254 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 139/261 (53%), Gaps = 12/261 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G S G+P I + C + K++R R S+ + N + ++D GPDF Q+ Sbjct: 5 FLGTGTSQGIPVIGSNHPVCHSQDKKDKRLRVSIWVE-----WDNNSFVIDCGPDFRQQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L IDA+L+TH H+DH G+D +R +F KQ I +YA +K+L + F Y F+ Sbjct: 60 LASGCSKIDAILFTHEHSDHTAGLDDIRPFFFKQG-DIPIYAHERVLKNLEKRFDYIFET 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + P V PI +ENN V I + S + IPI HG + G+RF AY TDV Sbjct: 119 ENKYPGSPGVFPIEVENN-VAIDIDSK----KIIPINAIHGGLQVFGYRFDAFAYLTDVK 173 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 + KL+NL+ L+I+AL+ LH++HF+L E+L I ++ PK A LTH+ + Sbjct: 174 TIEPAEINKLKNLEVLVINALREELHNTHFNLQEALDFIAIVQPKKAYLTHIGHTFGFHQ 233 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 V K P V A+D + + Sbjct: 234 EVQKKLPKNVFLAYDNLIINI 254 >gi|332171404|gb|AEE20659.1| beta-lactamase domain-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 263 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 21/274 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C T+ +++R R S+ I + ++D GPDF Sbjct: 1 MKITFLGTGTSQGIPVIGSTHPVCLSTDARDKRLRVSVLIE-----WEDYNYVIDCGPDF 55 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+L + +L TH HADH+ G+D +R + +Q + +YA + Sbjct: 56 RQQMLSTLSRKRTTEGDPAPLHGILLTHEHADHVAGLDDIRPFVFRQG-DMPIYAHKRVL 114 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K L E F Y F + P V + N + G IE PI HG + G Sbjct: 115 KTLAERFDYIFTTENRYPGAPSVASKEVVNG-----VSITLGNIEVQPIEAYHGSLQVFG 169 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNA 235 +RF ++AY TDV + +EKLQ LD L+++ L+ H +H ++ E+L + I PK Sbjct: 170 YRFQDIAYLTDVKTIADDEIEKLQGLDILVLNCLREEAHYTHLNVEEALDLVAKIKPKRT 229 Query: 236 ILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ L + + P V A+DG+ ++ Sbjct: 230 YLTHISHHLGFHAEAEQKLPKNVFLAYDGLTLTT 263 >gi|298208482|ref|YP_003716661.1| hydrolase, metal-dependent [Croceibacter atlanticus HTCC2559] gi|83848405|gb|EAP86274.1| hydrolase, metal-dependent [Croceibacter atlanticus HTCC2559] Length = 253 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C N K++R R S+ I + +++D GPDF Sbjct: 1 MKITYLGTGTSQGIPIIGSTHPVCLSENIKDKRLRVSVLIEI-----NGKNIVIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + +DA+++TH H+DH G+D +R +F KQ I++Y L + F Y Sbjct: 56 RQQMLTNPIPRLDAIVFTHEHSDHTAGLDDIRPFFFKQGA-INLYGNERVFNSLKQRFAY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + YP + ++ + P + I IPI H + G+R N AY Sbjct: 115 IFET--ENKYPGAPDVVLNPIKNKPFMVNG----ISIIPIRVLHNTLPVFGYRIENFAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV P E L KL+NL+ L I AL+ H+SHF+L E+L +E + PK A TH+ L Sbjct: 169 TDVKTVPDEELHKLKNLEVLTISALRIEPHASHFNLEEALSFVEKVKPKKAYFTHISHLL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 +D V P + A+D ++ + Sbjct: 229 GFHDEVESQLPDHIHLAYDNLKITL 253 >gi|163755311|ref|ZP_02162431.1| metal-dependent hydrolase [Kordia algicida OT-1] gi|161324731|gb|EDP96060.1| metal-dependent hydrolase [Kordia algicida OT-1] Length = 254 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I + C + +++R R S+ IS + ++D GPDF Sbjct: 1 MQVTFLGTGTSQGIPIIGSNHPVCLSDDFRDKRLRVSILIS-----WDDAVYVIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR ID +L+TH HADH G+D +R ++ +Q I +YA + F Y Sbjct: 56 RQQMLRANCNKIDGILFTHEHADHTAGLDDIRPFYFRQG-DIPMYAHKRVFGEFKKRFDY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + P V ++NN+ P ++ + +PI H ++ G+RF N AY Sbjct: 115 IFRTENKYPGAPGVIQYEVKNNE-PFQLQG----VTVMPINAWHYKLQVFGYRFDNFAYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV AE +KL+ L L+++AL+ H SHFSL E+L+ I I P+ A LTH+ L Sbjct: 170 TDVKTMEAEERDKLKGLKVLVVNALRIEEHISHFSLEEALEFIAEIQPEKAYLTHISHLL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + V + P V A+D + + Sbjct: 230 GFHAEVSEKLPENVFLAYDTLTITI 254 >gi|309389080|gb|ADO76960.1| beta-lactamase domain protein [Halanaerobium praevalens DSM 2228] Length = 252 Score = 307 bits (788), Expect = 7e-82, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 12/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I D C NPKN+R R+S+ I + +++DT P+ Sbjct: 1 MQITFLGTGTSHGVPVIACDCKVCQSNNPKNKRMRTSIHI-----KSKEYNLLIDTPPEM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +++++ ++ +D+V TH HADH+ G D +R Q + + VYA ++++ F Y Sbjct: 56 RLELIKNKIKHVDSVFMTHAHADHLMGFDDIRALNWFQGKEMPVYADQKTLENIKRVFPY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F P V +++ +K ++ PI HG+ L +R N AY Sbjct: 116 IFTKKISGGGIPQV---ILKEMKTEFVLK----DLKVTPIPIYHGKNKILAYRINNFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P SLE L+ +++ IDAL+ H +H S+ +++K + +N K+ LTH+ +L Sbjct: 169 TDCSKIPKSSLELLKGIEYAAIDALRFKEHPTHMSVDQAVKLSQDLNLKHTYLTHISHNL 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 D++ + P + PA+DG+ + Sbjct: 229 DHEKLKDYLPRNISPAYDGLVINL 252 >gi|86130306|ref|ZP_01048906.1| metallo-beta-lactamase superfamily protein [Dokdonia donghaensis MED134] gi|85818981|gb|EAQ40140.1| metallo-beta-lactamase superfamily protein [Dokdonia donghaensis MED134] Length = 263 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 21/274 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C +P+++R R S+ I ++D GPDF Sbjct: 1 MKITFLGTGTSQGIPIIGSTHPVCLSDDPRDKRLRVSVLIE-----WDKYNYVIDCGPDF 55 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+L + +L+TH HADH+ G+D +R + +Q + +Y + Sbjct: 56 RQQMLSTLSRKRTPAGDPAPLHGILFTHEHADHVAGLDDIRPFVFRQG-DMPIYGHKRVI 114 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K+L E F Y F + P V ++NN+ + G I PI HG + G Sbjct: 115 KNLEERFEYIFTRENRYPGAPSVTSHEVKNNE-----PISLGNIAVTPIEVYHGDLQVFG 169 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNA 235 +RF +AY TDV E + KL+NL+ L+I+ L+ H +H ++ E+L I INPK A Sbjct: 170 YRFDKIAYLTDVKTIAEEEIAKLKNLEILVINCLREEPHRTHLNVDEALSLIARINPKKA 229 Query: 236 ILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ L + P V A+DG+ ++ Sbjct: 230 YLTHISHHLGFHADAEAKLPENVYIAYDGLTLTT 263 >gi|119384879|ref|YP_915935.1| beta-lactamase domain-containing protein [Paracoccus denitrificans PD1222] gi|119374646|gb|ABL70239.1| beta-lactamase domain protein [Paracoccus denitrificans PD1222] Length = 266 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 113/265 (42%), Positives = 148/265 (55%), Gaps = 8/265 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LGCG+S GVPR+ WG CDP NP+NRR R SL + R G+ T +++DTGPD Q Sbjct: 5 TVLGCGSSGGVPRLGNRWGECDPANPRNRRRRCSLLVERFGHDGA-TRLLIDTGPDLVPQ 63 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +DAV YTH HADHIHGID LR +R + V+A L F Y F+ Sbjct: 64 LLDADVAELDAVAYTHAHADHIHGIDDLRQIVFNMRRRMPVWADQPTAAALKTRFGYIFE 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAY 183 +YPPI + I P ++ AGG IE P HG +++LGFR G ++ Y Sbjct: 124 TPPGSSYPPICDMQPIRG---PFAIEGAGGSIELAPFEVNHGDMNALGFRIGGVEQSLVY 180 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 DV A P E+ + D I DAL+ H SH L+ +L+ I ++T+MHVD Sbjct: 181 LPDVLAIPEEAWSTIMGCDVFICDALRRIPHPSHAHLALTLEWIARSGCARGVITNMHVD 240 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDYD V+ TP VVPA DGM+ Sbjct: 241 LDYDAVMHETPENVVPAHDGMRIEL 265 >gi|319954957|ref|YP_004166224.1| beta-lactamase domain protein [Cellulophaga algicola DSM 14237] gi|319423617|gb|ADV50726.1| beta-lactamase domain protein [Cellulophaga algicola DSM 14237] Length = 261 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 131/267 (49%), Gaps = 12/267 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T LG G S G+P I C N K++R R S+ +S N ++D GP Sbjct: 6 NQVTITFLGTGTSQGIPVIGSIHPVCLSENQKDKRLRVSVLVS-----WENFNYVIDCGP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q+L + +D +L+TH H+DH GID +R +F KQ I +YA +K L F Sbjct: 61 DFRQQMLENPIDQLDGILFTHEHSDHTAGIDDIRPFFFKQG-DIPIYAHERVIKSLKIRF 119 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F + P V + N G + IPI +H R+ G+R + A Sbjct: 120 DYIFAHENRYPGAPAVEIKEVRNG-----TTFKIGNLNVIPIDIKHNRLQVFGYRLQDFA 174 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ + ++KL + L++ AL+ H SHF+L+E+L I I P+ A LTH+ Sbjct: 175 YLTDIKTIEEQEIKKLNGVKVLVVSALRIEPHHSHFNLAEALAFIAKIKPEKAYLTHVSH 234 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L +D V K+ P V A+D ++ + Sbjct: 235 LLGFHDEVQKTLPKNVYLAYDNLKITI 261 >gi|326335502|ref|ZP_08201689.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692268|gb|EGD34220.1| lipoate-protein ligase B [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 296 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 12/262 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I + + K++R R+S+ +S V +D PDF Q Sbjct: 44 TFLGTGTSQGVPVIGMNTPVARSKDKKDKRLRTSVLLS-----WGGVNVNIDCSPDFRQQ 98 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR +V ++A+L+TH HADH G+D +R + LKQ + +Y P ++ L F Y F Sbjct: 99 MLRHKVQHLEAILFTHEHADHTAGLDDIRPFVLKQG-DMPIYGLPRVIEQLRIRFAYIFA 157 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P V IE+ P + + PI QHG + +G+R GN+AY TD Sbjct: 158 KENRYAGAPSVKVTEIEDY-TPFLLFGK----KVTPISIQHGTLPIIGYRIGNLAYITDA 212 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-Y 246 + L K +D L+++AL+ H +H +L E+L I + P+ A LTHM + + Sbjct: 213 KYINEKELSKFYKVDTLVLNALRKAPHPTHLNLDEALTIIREVCPRQAFLTHMSQTMGFH 272 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 V K PS+V A+D + Sbjct: 273 AKVQKELPSQVFLAYDNLTIKV 294 >gi|237718355|ref|ZP_04548836.1| hydrolase [Bacteroides sp. 2_2_4] gi|293372865|ref|ZP_06619239.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|299146577|ref|ZP_07039645.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] gi|229452288|gb|EEO58079.1| hydrolase [Bacteroides sp. 2_2_4] gi|292632154|gb|EFF50758.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|298517068|gb|EFI40949.1| lipoate-protein ligase B [Bacteroides sp. 3_1_23] Length = 252 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 86/263 (32%), Positives = 128/263 (48%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 I+G G S GVP+I C T+PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRIIGSGTSTGVPQIGCTCPVCTSTDPKDNRLRASAIVET-----DDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVLR ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RTQVLRLPFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GSVPIYAENYVAQGLRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ + + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEISVGQAFSVNHTEVLPLRVMHGRLPILGYRIGQLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D L+++AL+ H +H +L E+L + I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGIDVLVVNALRIATHPTHQNLEEALAVAQRIQAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V KS P + AFDG+ Sbjct: 228 GLHAEVEKSLPENIHLAFDGLDI 250 >gi|83816562|ref|YP_444636.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] gi|83757956|gb|ABC46069.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] Length = 291 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 6/263 (2%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I D C +P++ RTR + + + +++DTGPDF Q Sbjct: 26 TLLGTGTSTGVPVIGCDCEVCTSADPRDTRTRCACYVEV-----GDMGLLIDTGPDFRAQ 80 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + IDAV YTH H DH+ G+D LR YF +R + YA + L ++ Y F Sbjct: 81 ALREDIDRIDAVCYTHHHFDHVVGLDDLRPYFRDNRRVMPCYAHAETAAVLRRNYDYVFG 140 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 D V V++ +A + PIL HG + G+R G AY TD Sbjct: 141 G-DPYPGAANVELEVVDGPFRVPSRTAADTAVPVDPILLMHGDVPVYGYRLGRFAYLTDA 199 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +A P S E+LQ +D L++D L+ H +HFS E++ I + L HM D+ + Sbjct: 200 SAIPEASYEQLQGIDTLVLDGLRPRPHPTHFSFDEAVAAARRIGARETYLVHMTHDVRHA 259 Query: 248 MVLKSTPSRVVPAFDGMQFSSPI 270 + P V A DG+ P Sbjct: 260 EAEAALPDDVHLAHDGLTLEVPA 282 >gi|253996503|ref|YP_003048567.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253983182|gb|ACT48040.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 253 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 140/264 (53%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G P I C T+ +N RTR S I+ + +++DTGPD Sbjct: 1 MQLTMLGVGSSAGTPMIGCQCSTCISTDKRNHRTRCSSAITL----DNGKVILIDTGPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE+++++DAVLYTH HADH+HGID LR Y +Q+ I +Y +PD M+H+ + F Y Sbjct: 57 RQQALRERLMNVDAVLYTHTHADHLHGIDDLRAYCQRQRCQIPLYGSPDAMRHIADKFGY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + D PI+ P+ + PI +HG G+R GN+ Y Sbjct: 117 TLREAGDFWDLPILKVN-------PVISSFSLFEQTITPIPIKHGHSDIYGYRIGNLVYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV+A PA S+E L ++D L++D L+ H +H +L +SL I K L HM DL Sbjct: 170 TDVSAVPASSMEFLNDVDVLLLDCLRITPHYTHVNLEQSLALASQIGAKATYLIHMTHDL 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 +Y + P+ V +DG++ Sbjct: 230 EYAELSAQLPANVFVGYDGLKIKI 253 >gi|218130095|ref|ZP_03458899.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] gi|217987599|gb|EEC53927.1| hypothetical protein BACEGG_01682 [Bacteroides eggerthii DSM 20697] Length = 254 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 126/267 (47%), Gaps = 16/267 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C +P++ R R+S + + T+++D PDF Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADPRDNRLRASSLL-----HADDATILIDCSPDF 55 Query: 65 YMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR + ID VL TH H DH G+D LR + + I +Y+ HL Sbjct: 56 RAQILRTSIYEQIDGVLITHEHYDHTGGLDDLRPFCRFSE--IPIYSDAYTAAHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVA 182 YCF D+ YP + + +V E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYL---QEVEAGKPFFIRQTEVLPVAVMHGRLPILGYRIGGRLG 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ P S E+LQ LD L+++AL+ H +H S+SE+L E I K HM Sbjct: 168 YVTDMLTMPDASYEQLQGLDVLVMNALRPQPHPTHQSISEALAAAERIGAKETYFIHMSH 227 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P V A+DGM+ + Sbjct: 228 HVGLHAEINSQLPPHVHFAYDGMEINF 254 >gi|291513621|emb|CBK62831.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Alistipes shahii WAL 8301] Length = 259 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 17/270 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C + ++ R R+S + R +++D GPDF Sbjct: 1 MKLTFLGTGTSQGVPVIGCRCKVCTSADRRDNRLRTSAMVETRGVR-----IVIDAGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP----IDVYAAPDCMKHLFE 120 Q+LR V +DA+L TH H DHI G+D +R + P + ++AAP ++ + + Sbjct: 56 RYQMLRTGVRHLDAILLTHEHKDHIGGLDDVRAFNFVDYPPTVHKVHIWAAPRALECVRK 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFG 179 F Y F R P IE +++ I G +E +P+ H R GFR G Sbjct: 116 DFDYAFAQDKYRGVP------EIELHEIDIARPFRVGDVEIVPVSGHHSERFEVTGFRIG 169 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +AY TD EKL+ + L ++AL+ H SHF+L+E+L I + P+ A +TH Sbjct: 170 TLAYLTDFKTIEDAEAEKLRGTEVLAVNALRFAPHPSHFNLAEALALIRRVGPREAYITH 229 Query: 240 MHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 M ++ + + P V A+DG++ Sbjct: 230 MSHEIGLHAETEATLPPGVHLAYDGLEVEI 259 >gi|89890728|ref|ZP_01202237.1| metal-dependent hydrolase, beta-lactamase family [Flavobacteria bacterium BBFL7] gi|89516873|gb|EAS19531.1| metal-dependent hydrolase, beta-lactamase family [Flavobacteria bacterium BBFL7] Length = 253 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 94/265 (35%), Positives = 134/265 (50%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S G+P I D C T+ +++R R S I +++D GPDF Sbjct: 1 MKITILGTGTSQGIPVIGSDHPVCRSTDSRDKRLRVSAMIEHQG-----KRLVIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR QV +DAVL+TH HADH G+D LR +F +Q I+ Y L E F Y Sbjct: 56 RQQMLRHQVNHLDAVLFTHEHADHTAGLDDLRPFFFRQGE-INCYMTKRVHLALQERFSY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F ++ YP + + V E +D + IE P+L HG I GFR N AY Sbjct: 115 MFATVNK--YPGVADLTVHEFDDHAFKVSG----IEVTPVLADHGFIPVHGFRVLNFAYM 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV A KL+NLD L+++ L+ H +H +L E+L + + PK TH+ L Sbjct: 169 TDVKTINATEKHKLKNLDVLVLNMLREQEHKTHLNLDEALDLVRELQPKRTYFTHISHHL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 ++ V K+ P V A+D ++ + Sbjct: 229 GFHEEVEKNLPEGVYLAYDNLEINL 253 >gi|325108077|ref|YP_004269145.1| beta-lactamase [Planctomyces brasiliensis DSM 5305] gi|324968345|gb|ADY59123.1| beta-lactamase domain protein [Planctomyces brasiliensis DSM 5305] Length = 264 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 8/265 (3%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG G S GVP + C T+PKN RTRSS+ + R +IVDT P+ Sbjct: 7 EVVILGSGTSHGVPMVGCRCPICQSTDPKNNRTRSSILV-----RAPEGNIIVDTTPEMR 61 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 +Q++REQV + A ++TH HADHI G+D LR + R I ++ P + L +F Y Sbjct: 62 IQLVREQVDLVHAAIFTHGHADHIFGLDDLRQFGFLLDRDIPLFCEPLVEEQLRLAFSYA 121 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F+ D + ++ + + P+ HG + +GFR G +AYCT Sbjct: 122 FRPPADPKRRGAIPRFDMQPMTLE---PFELLGVRVQPLRLFHGSLPIVGFRIGELAYCT 178 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV+ P E+ L+ + L+IDAL+ H +HF++ ++++ I K LTH+ D++ Sbjct: 179 DVSEIPDETWPLLEGVQVLVIDALRFRPHPTHFNIEQAIEASRRIGAKQTYLTHICHDIE 238 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSPI 270 + V + P V A+DG++F+ + Sbjct: 239 HQTVERELPEGVNLAYDGLKFACEL 263 >gi|124515723|gb|EAY57232.1| putative metallo-beta-lactamase family protein [Leptospirillum rubarum] Length = 262 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 136/266 (51%), Gaps = 13/266 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +G GAS GVP I D C ++PKN RTRSS+ + R ++VDT PD Sbjct: 1 MEVLFMGTGASTGVPMIGCDCSVCQSSDPKNERTRSSIMV-----RVDGKNILVDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q L+ + IDAV++THPHADHI GID LR + QK I V+A P+ + + + F Y Sbjct: 56 RIQSLKNHIKRIDAVIFTHPHADHILGIDELRTFNFWQKEEIPVFADPETLGTVMKMFPY 115 Query: 125 CFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F + P + P I I+ P +HG + + R ++ Y Sbjct: 116 AFSEENRGGLTRPRLAPREI-------VGAMKINEIQVTPFPVKHGPVYNHALRLDDLVY 168 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD N E +E ++ +D LII A+ H+SHF + ++L IE + P+ A LTH+ Sbjct: 169 LTDCNEVSDEGMEVMKGVDTLIIGAVLYEPHASHFGIWQALDLIERVQPRQAFLTHLSHR 228 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 +DY+ + PS V AFDG+ S P Sbjct: 229 IDYNELTTRLPSGVQAAFDGLTVSLP 254 >gi|254417891|ref|ZP_05031615.1| hypothetical protein BBAL3_201 [Brevundimonas sp. BAL3] gi|196184068|gb|EDX79044.1| hypothetical protein BBAL3_201 [Brevundimonas sp. BAL3] Length = 264 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 141/262 (53%), Gaps = 3/262 (1%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + ILG G+S GVPR GDWG CDP P+NRRTR S+ + G T +++DT PD Sbjct: 2 SFEVVILGSGSSGGVPRGDGDWGVCDPAEPRNRRTRCSMLARKTGPEGM-TNILIDTSPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L +DAVLYTH HAD HGID LR + + ++ I + + L F Sbjct: 61 LREQMLASGTRHVDAVLYTHDHADQTHGIDDLRTFATRARKRIPAWMDEATLTSLSHRFD 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F++ YPP+++ VI + ++ GG I + Q HG I S+G+R G++AY Sbjct: 121 YIFES--KFGYPPLLDAQVIPPHGTAWSVEGPGGAIPVVTFDQGHGPIRSVGYRLGDMAY 178 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +DV+ ++ + I+DAL+ H +H L +L+ I + + A+LT++H+D Sbjct: 179 SSDVSDLDEAAIRAVAGCQVWIVDALRYTPHPTHAHLDRTLEWIAAADVERAVLTNLHID 238 Query: 244 LDYDMVLKSTPSRVVPAFDGMQ 265 +DY + P+ V FDG Sbjct: 239 MDYKELSAIVPANVEVGFDGWT 260 >gi|53714274|ref|YP_100266.1| putative hydrolase [Bacteroides fragilis YCH46] gi|52217139|dbj|BAD49732.1| metal-dependent hydrolase [Bacteroides fragilis YCH46] Length = 252 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 14/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP I C +P++ R R+S + + T+++D GPDF Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPRDYRLRTSALVYT-----DDATILLDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR IDAVL +H H DH+ G+D LR + + +YA + L Y Sbjct: 56 REQMLRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRF--GEVPIYAETYTAERLRSRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + +YP + N I ++ E +P+ HG++ LG+R G + Y Sbjct: 114 CFV---EHSYPGVPN---IPLREIEPNRPFLVNHTEVLPLRVMHGKLPILGYRIGKLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+LQ ++ L+++AL+ H++H SLSE+L+ ++ I K L HM + Sbjct: 168 TDMLTMPDESFEQLQGIEVLVMNALRIAPHNTHQSLSEALEAVKRIGAKETWLIHMSHHI 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 V K P V AFDG++ Sbjct: 228 GLQADVEKQLPPHVHFAFDGLELE 251 >gi|322436418|ref|YP_004218630.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] gi|321164145|gb|ADW69850.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] Length = 266 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 11/267 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN---PKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G S+GVP + C +NRRTR SL++ TV++DTGPD Sbjct: 1 MTFLGSGTSMGVPTLGCPCAVCADARIPGSRNRRTRPSLRLE-----WEGHTVLIDTGPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F+ Q +RE + +DAV YTH HADHI G+D LR + P+ +YA L F Sbjct: 56 FHAQAIRENISRVDAVFYTHHHADHILGMDDLRPLSFRNTTPLPLYADDPTADALERVFG 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F+ + V ++ + G + IP++ HGR G+RFG+ AY Sbjct: 116 YTFRTENRYPTSARVQIHRLDPTPGS-TTRIFGANFQRIPVI--HGRERITGYRFGSAAY 172 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD++ P ESL LQ LD LI+DAL+ H SH +++S+ +E + PK A THM + Sbjct: 173 LTDMSDIPPESLALLQGLDILILDALRPAPHPSHSHVAKSIAFVEQLKPKRAYFTHMGHE 232 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LD++ + P + A+DG+Q + I Sbjct: 233 LDHNATEATLPQGIHLAYDGLQLTFDI 259 >gi|296127513|ref|YP_003634765.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] gi|296019329|gb|ADG72566.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] Length = 252 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 131/262 (50%), Gaps = 12/262 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I C + +++RTRSS+ I +N IVDT DF Sbjct: 3 ITFLGTGTSDGVPMIGCKCKVCKSRDKRDKRTRSSILIQH-----NNKNYIVDTSADFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LRE + S++AV YTH HADH GI LR ID Y D M L E + Y F Sbjct: 58 QMLRENIGSLNAVFYTHAHADHTSGIVDLRSLNFIMHTSIDCYGNKDTMDTLREKYDYFF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P V IEN + I+ PI +HG ++ LG+RF N Y TD Sbjct: 118 NPVQIGGGLPQVVFHHIEN-------EMFFDDIKVTPIAVKHGILNILGYRFNNFTYITD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ ESL+ ++ + L+++ L+ H +H SL ES+ + + K A THM D+ + Sbjct: 171 ASSISDESLKLIEGTEILVLNGLRYRPHHTHLSLQESVNIADKLGVKKAYFTHMTHDVLH 230 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + PS + PA+DG++ Sbjct: 231 RHLERELPSNMHPAYDGLKIEI 252 >gi|94969657|ref|YP_591705.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94551707|gb|ABF41631.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 260 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 14/267 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S+GVP I D C ++P +RR R S+ + V++DT PDF Sbjct: 5 LTVLGSGTSMGVPTIGCDCAVCSSSDPHDRRLRPSVMVQY-----DGKLVLIDTTPDFRE 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ---KRPIDVYAAPDCMKHLFESFR 123 Q LRE + IDA++YTH HADHI G+D +R + + +YA + L F+ Sbjct: 60 QALREGIKKIDAIVYTHGHADHILGLDDVRPLSFPRITGGARVPLYANEKTERVLKHVFK 119 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F DD + I + + I + A + IP+ HG G+RFG+ AY Sbjct: 120 YIF--DDDYKFGSIAQVEMHRVHHEAIELFGA----KFIPVPVIHGETEIYGYRFGSAAY 173 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD ++ P S+E L+ LD L +DAL++ H +H +L S+ E + K+ TH+ D Sbjct: 174 LTDFSSIPDASMEMLRGLDILFLDALRHKPHPTHSTLDNSVSIAEKLKAKHTYFTHISHD 233 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 L ++ + P+ + A DG++ + Sbjct: 234 LPHEETNRQLPAGIQLAHDGLKLEFEL 260 >gi|317476587|ref|ZP_07935833.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] gi|316907263|gb|EFV28971.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] Length = 254 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 16/267 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C +P++ R R+S + + T+++D PDF Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADPRDNRLRASSLL-----HADDATILIDCSPDF 55 Query: 65 YMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR + ID VL TH H DH G+D LR + + I +Y+ HL Sbjct: 56 RAQILRTSIYEQIDGVLITHEHYDHTGGLDDLRPFCRFSE--IPIYSDAYTAAHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVA 182 YCF D+ YP + + +V E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYL---QEVEAGKPFFIRQTEVLPVAVMHGRLPILGYRIGGRLG 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ P S E+LQ LD L+++AL+ HS+H S+SE+L E I K HM Sbjct: 168 YVTDMLTMPDASYEQLQGLDVLVMNALRPQPHSTHQSISEALAAAERIGAKETYFIHMSH 227 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + + P V A+DGM+ + Sbjct: 228 HVGLHAEINSQLPPHVHFAYDGMEINF 254 >gi|159896849|ref|YP_001543096.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889888|gb|ABX02968.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 255 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 91/262 (34%), Positives = 139/262 (53%), Gaps = 11/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C T P+N+RTR++ I + TT+++D GPD Sbjct: 1 MQLTILGCGGSMGVPMLACDCVVCTSTEPRNQRTRTAALIQSPT-----TTILIDPGPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q LR + +DAVL THPH DHI GID LR + L +R + +YA + + + Y Sbjct: 56 RLQGLRHNLQQLDAVLVTHPHQDHIGGIDDLRPFTLHTQRMLPLYANQFTLDRIRYQYDY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + + P + +++ + + I G + IP+ HG LGFR G++ Y Sbjct: 116 AFASGESASTRPSLGLNLLDGSALQI------GDVPIIPLPIDHGDWQILGFRIGDLTYM 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV+ P + E L + LII AL++ H HF++ ++L + I P+ A HM L Sbjct: 170 TDVSHIPEPTFEMLHGVKSLIIGALRHEPHPLHFTVEQALAAVARIQPEQAFFVHMSHSL 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY+ + P V A+DG+ Sbjct: 230 DYNTEHATLPKHVQLAYDGLVL 251 >gi|193214485|ref|YP_001995684.1| beta-lactamase domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087962|gb|ACF13237.1| beta-lactamase domain protein [Chloroherpeton thalassium ATCC 35110] Length = 259 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 134/262 (51%), Gaps = 8/262 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P + C +P+++R R+SL + +++DT DF Sbjct: 1 MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVET-----GQKNILIDTSADF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + ID +L TH H DH++G+D +R + ++ IDVY PDC+ + F Y Sbjct: 56 RQQMLRSSIRKIDLILLTHHHFDHLYGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + P + + P + I P+ HGR+ G+R GN+AY Sbjct: 116 AFHRDNLQIGLPALRMHAV---VKPFFVGENNHKITITPVEVGHGRLGIYGYRIGNMAYL 172 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD P +S + L+NLD LII++L+ LH +H SL ESL I+ I+PK A LTH +L Sbjct: 173 TDCKTIPDKSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHEL 232 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 + + P V PA D ++ Sbjct: 233 KHSRLDAELPENVFPAHDMLEL 254 >gi|213963566|ref|ZP_03391819.1| metallo-beta-lactamase domain protein [Capnocytophaga sputigena Capno] gi|213953846|gb|EEB65175.1| metallo-beta-lactamase domain protein [Capnocytophaga sputigena Capno] Length = 253 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 126/264 (47%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I D TNPK++R R+S IS +T + +D PDF Sbjct: 1 MKITFLGTGTSQGVPVIASDHPVGKSTNPKDKRLRTSALIS-----WEHTNIAIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V ++A+L+TH HADH G+D +R + Q + +Y + L F Y Sbjct: 56 RQQMLTNDVQHLEAILFTHEHADHTAGMDDIRPFVRLQG-DMPIYGLKRVINELRVRFAY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V I N P + PI HG + +G+R N AY Sbjct: 115 IFATENRYEGAPSVIAHEI--NSTPFSLHGKI----VQPIHVMHGNLPIIGYRIENFAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + +EKL+ +D L+++ L+ H +H +LSE+L+ IE + PK LTH+ Sbjct: 169 TDAKYIEDKEIEKLKGVDTLVLNCLREQAHPTHLNLSEALEIIEQVKPKRTFLTHVSQTF 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 +D + ++ P V A+D + Sbjct: 229 GFHDEIQQNLPKNVFLAYDNLVIE 252 >gi|312888267|ref|ZP_07747844.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] gi|311299298|gb|EFQ76390.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] Length = 255 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 12/264 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP I D C + ++R RSS+ + ++VD+GPDF Sbjct: 3 ITFLGTGTSQGVPVIACDCEVCTSADKHDKRLRSSIMVE-----SEGKVIVVDSGPDFRY 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LR V +DA+++TH H DH+ G+D +R + KQ+ ID+YA L F Y F Sbjct: 58 QMLRAHVTHLDAIVFTHEHKDHVAGLDDIRAFNYKQQSAIDIYATERVQAALKREFAYIF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P V+ I++ G + PI H ++ LGFR G+ Y TD Sbjct: 118 HEFK-YPGIPQVDLHTIDDRHS-----FNIGRVHITPIEAMHYKLPVLGFRIGDFTYITD 171 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD- 245 +EK++ L+I+AL+ H SHF+LSE++ + I + TH+ L Sbjct: 172 AKTITDTEIEKIKGTKILVINALQKENHISHFTLSEAIAFAQQIGAEQTYFTHISHRLGK 231 Query: 246 YDMVLKSTPSRVVPAFDGMQFSSP 269 + V + P+ + A+DG++ Sbjct: 232 HQDVSQLLPAGIYLAYDGLRLDLE 255 >gi|60682330|ref|YP_212474.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|253564790|ref|ZP_04842246.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|265766234|ref|ZP_06094275.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|60493764|emb|CAH08554.1| putative hydrolase [Bacteroides fragilis NCTC 9343] gi|251946255|gb|EES86632.1| metal-dependent hydrolase [Bacteroides sp. 3_2_5] gi|263253902|gb|EEZ25367.1| metal-dependent hydrolase [Bacteroides sp. 2_1_16] gi|301163804|emb|CBW23359.1| putative hydrolase [Bacteroides fragilis 638R] Length = 252 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 14/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP I C +P++ R R+S + + T+++D GPDF Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPRDCRLRTSALVYT-----DDATILLDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR IDAVL +H H DH+ G+D LR + + +YA + L Y Sbjct: 56 REQMLRVPFGKIDAVLISHEHYDHVGGLDDLRPFCRF--GEVPIYAETYTAERLRSRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + +YP + N I ++ E +P+ HG++ LG+R G + Y Sbjct: 114 CFV---EHSYPGVPN---IPLREIEPNRPFLVNHTEVLPLRVMHGKLPILGYRIGKLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+LQ ++ L+++AL+ H++H SLSE+L+ ++ I K L HM + Sbjct: 168 TDMLTMPDESFEQLQGIEVLVMNALRIAPHNTHQSLSEALEAVKRIGAKETWLIHMSHHI 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 V K P V AFDG++ Sbjct: 228 GLQADVEKQLPPHVHFAFDGLELE 251 >gi|209964483|ref|YP_002297398.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] gi|209957949|gb|ACI98585.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] Length = 257 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 104/265 (39%), Positives = 136/265 (51%), Gaps = 11/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S GVP I WG CDP+NPKNRR R S+ + T V+VDT PD Sbjct: 1 MQVTILGCGGSSGVPLIGNVWGRCDPSNPKNRRRRPSILVE-----SGATRVLVDTTPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ V +D VL+TH HADH HGID LR +R IDV+ D + L F Y Sbjct: 56 REQLIDAGVQYLDGVLFTHAHADHCHGIDDLRAMNWLMRRTIDVWGDADTLAQLHARFAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF+ + + D P + G +E P +Q HG SSLGFRFG AY Sbjct: 116 CFQPHPESEFYARPALRSHRA-DGPFRI----GSLEIEPFVQDHGLSSSLGFRFGRFAYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TDV + L+ ++ I+D ++ H H L+ +L IE + PK AILTHM+ Sbjct: 171 TDVVRLDEAAFRVLEGVETWIVDCVRIEPPHPVHAHLAVTLSWIERLKPKRAILTHMNHM 230 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY+ + P V P +DGM Sbjct: 231 MDYETLRAILPPGVEPGYDGMVIEV 255 >gi|326801258|ref|YP_004319077.1| beta-lactamase [Sphingobacterium sp. 21] gi|326552022|gb|ADZ80407.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 255 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 13/261 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G S GVP I + C ++ +++R RSS+ ++ +++DTGPDF Q+ Sbjct: 5 FLGTGTSQGVPVIACNCNVCTSSDYRDKRLRSSILLTEKG-----KNIVIDTGPDFRFQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR +V ++AVLYTH H DHI G+D +R + Q IDV+ + L F Y F Sbjct: 60 LRAKVNHLEAVLYTHAHKDHIAGLDDIRAFNYFQGTAIDVFGDYLVQEALKREFYYIFA- 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + YP I + + D + G I PI H ++ G+RFG+ Y TDV Sbjct: 119 --EHKYPGIPKINLRDVTDQSFFV----GNIGVQPIDIMHFKLPIKGYRFGDFTYLTDVK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 + S+ K++ L+++AL+ H SHF+L E++ I + LTH+ L ++ Sbjct: 173 SVSESSVNKIKGTKTLVVNALQREAHISHFTLEEAINFASRIGADHTYLTHISHRLGLHE 232 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 V K P + A+DG++ S Sbjct: 233 EVSKELPPGIHLAYDGLEISL 253 >gi|329955847|ref|ZP_08296650.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] gi|328525227|gb|EGF52277.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] Length = 254 Score = 303 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 127/266 (47%), Gaps = 18/266 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C + ++ R R+S + + T+++D GPDF Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADLRDNRLRASALLHT-----DDATILIDCGPDF 55 Query: 65 YMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR V ID VL TH H DH+ G+D LR + + I +Y+ HL Sbjct: 56 RTQMLRAAVYERIDGVLITHEHYDHVGGLDDLRPFCRFSE--IPIYSDAYTAAHLRVRMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NV 181 YCF D+ YP + + E P ++ E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYLREVEAGKPFSVRGT----EILPVAVMHGRLPILGYRIGGRL 166 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD+ P S E+LQ LD L+I+AL+ H +H S+SE+L E I K HM Sbjct: 167 GYVTDMLTMPDASYEQLQGLDVLVINALRPQPHPTHQSISEALAAAERIGAKETYFIHMS 226 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQF 266 + + P V A+DGM+ Sbjct: 227 HHAGLHAEIDSQLPPHVHFAYDGMEI 252 >gi|225619247|ref|YP_002720473.1| metal-dependent hydrolase [Brachyspira hyodysenteriae WA1] gi|225214066|gb|ACN82800.1| metal-dependent hydrolase [Brachyspira hyodysenteriae WA1] Length = 252 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 130/264 (49%), Gaps = 12/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C + +++RTRSS+ I +N +VDT DF Sbjct: 1 MRITFLGTGTSDGVPMIGCKCKVCTSKDKRDKRTRSSILIRH-----NNKNYVVDTSADF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE+V S++AV YTH HADH GI LR ID Y D M +L E + + Sbjct: 56 RAQMLREKVDSLEAVFYTHSHADHTSGIVDLRSLNFIMHTSIDCYGNKDTMDNLREKYDF 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V IEN + I+ PI +HG ++ LG+RF N Y Sbjct: 116 FFNPVQIGGGLPQVVFHHIEN-------EMMFDDIKVTPIAVKHGVLNILGYRFNNFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + ESL+ ++ + L+++ L+ H +H SL ES+ + + K A THM D+ Sbjct: 169 TDASHISDESLKLIEGTEILVLNGLRYRQHHTHLSLQESVNIADKLGVKKAYFTHMTHDV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + K P + PA+DG+ Sbjct: 229 LHRNLEKELPPNMYPAYDGLSIEF 252 >gi|187735380|ref|YP_001877492.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425432|gb|ACD04711.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 261 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 137/273 (50%), Gaps = 16/273 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + LG G S GVP+I C +P+NRR RSS+ + T +++D+ Sbjct: 1 MTSVMNILFLGTGTSTGVPQIGCSCAVCTSPDPRNRRLRSSIYVEAAG-----TRLLLDS 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q LRE + +DAVLYTH H DH+ G D LR + ++ + +YA+P + L Sbjct: 56 SPDLRQQALRENITDVDAVLYTHAHVDHVGGFDDLRAFCWRRSGGLPMYASPMTVDALRT 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 + + F R+ P + G + A P+ H + + + Sbjct: 116 MYGWAFVPKPGRSGYVRPEPHEVTA-------PFRVGNMLATPLPVLHAGVETYAYLLEA 168 Query: 180 ---NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 ++ Y DV + PA SLE+++ +D LIID L+ LH +H L E+L I + P+ A+ Sbjct: 169 GGRSLVYMPDVKSIPAPSLERMKGVDLLIIDGLRYHLHPTHMCLEETLAAIAAVRPRRAV 228 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 LTH+ D+DY ++ P V+PA+DG++ S P Sbjct: 229 LTHLSHDMDYGILSGKLPENVMPAYDGLRLSLP 261 >gi|313159631|gb|EFR58989.1| metallo-beta-lactamase domain protein [Alistipes sp. HGB5] Length = 281 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 17/271 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G S GVP I C ++ ++ R R+S + R +++D GPD Sbjct: 20 CMKLTFLGTGTSQGVPVIGCRCRVCTSSDRRDDRLRTSAMVETQGVR-----IVIDAGPD 74 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRPIDVYAAPDCMKHLF 119 F Q+LR V IDA+L TH H DHI G+D +R + ID+YAAP + + Sbjct: 75 FRCQMLRTGVRRIDAILLTHEHKDHIGGLDDVRAFNFVDYPPTIHRIDLYAAPHTLDVVR 134 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF 178 + F Y F R P IE +++ + + +E +P+ H R + GFR Sbjct: 135 KDFDYAFAQDKYRGVP------EIELHEIDVTRPFSVKGVEILPVSGHHSERFAVTGFRI 188 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G +AY TD +EKL LD L+++AL+ H SHF+++E+L+ I ++P+ A LT Sbjct: 189 GRLAYLTDFKTIADAEVEKLTGLDVLVVNALRFAEHYSHFNVAEALELIARVSPREAYLT 248 Query: 239 HMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 HM D+ + + P V A+D ++ Sbjct: 249 HMSHDIGLHAETEPTLPPHVHMAYDTLEIEI 279 >gi|294506387|ref|YP_003570445.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber M8] gi|294342715|emb|CBH23493.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber M8] Length = 287 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 91/266 (34%), Positives = 130/266 (48%), Gaps = 12/266 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T+LG G S GVP I D C +P++ RTR + + + +++DTGPDF Q Sbjct: 26 TLLGTGTSTGVPVIGCDCEVCTSADPRDTRTRCACYVEV-----GDMGLLIDTGPDFRAQ 80 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE + IDAV YTH H DH+ G+D LR YF +R + YA + L ++ Y F Sbjct: 81 ALREDIDRIDAVCYTHHHFDHVVGLDDLRPYFRDNRRVMPCYAHAETAAVLRRNYDYVFG 140 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQHGRISSLGFRFGNVAYC 184 YP N + +E D P + S + PIL HG + G+R G AY Sbjct: 141 GDP---YPGAAN-VELEVVDGPFRVPSRTADDTAVPVDPILLMHGDVPVYGYRLGRFAYL 196 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P S E+LQ +D L++D L+ H +HFS E++ I + L HM D+ Sbjct: 197 TDASAIPEASYEQLQGIDTLVLDGLRPRPHPTHFSFDEAVAAARRIGARETYLVHMTHDV 256 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPI 270 + + P + A DG+ P Sbjct: 257 RHAEAEAALPDDIHLAHDGLTLEVPA 282 >gi|206602227|gb|EDZ38709.1| Putative metallo-beta-lactamase family protein [Leptospirillum sp. Group II '5-way CG'] Length = 262 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 136/266 (51%), Gaps = 13/266 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +G GAS GVP I D C +PKN RTRSS+ + R ++VDT PD Sbjct: 1 MEVLFMGTGASTGVPMIGCDCPVCQSLDPKNERTRSSILV-----RVDGKNILVDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q L+ + IDAV++THPHADHI GID LR + QK I V+A P+ + + + F Y Sbjct: 56 RIQSLKNHIKRIDAVIFTHPHADHILGIDELRTFNFWQKEEIPVFADPETLGTVMKMFPY 115 Query: 125 CFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F + P + P I + I+ P +HG + + R ++ Y Sbjct: 116 AFSEENRGGLTRPRLAPREIVGS-------IKIHEIQVTPFPVKHGPVYNHALRLDDLVY 168 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD N E +E ++ +D LII A+ H+SHF + ++L IE + P+ A LTH+ Sbjct: 169 LTDCNEVSDEGMEVMKGVDTLIIGAVLYEPHASHFGIWQALDLIERVQPRQAFLTHLSHR 228 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 +DY+ + PS V AFDG+ S P Sbjct: 229 IDYNELTTRLPSGVQAAFDGLMVSLP 254 >gi|222054482|ref|YP_002536844.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221563771|gb|ACM19743.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 251 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C + +++RTR+S+ I + ++VDT D Sbjct: 1 MKLTILGSGTSTGVPMVGCHCPVCSSGDRRDKRTRASIIIE-----NNGKYILVDTSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QV+RE + IDAVL+TH HADHIHGID LRG+ KR I Y + + MK + +F Y Sbjct: 56 RKQVIREHIPHIDAVLFTHSHADHIHGIDDLRGFHFIHKRIIPCYGSEESMKVIARNFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK ++ Y P++ +I M G +E PI HG + + G+RF +VAY Sbjct: 116 IFKGMEAAGYAPLMEQNIISG-----PMDLFGCRVE--PIPLMHGHMPTTGYRFDDVAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD ++ S KL L LI+DAL+ H +H+++ +LK +E + P++AILTH+ ++ Sbjct: 169 TDCSSIADTSRAKLAGLRLLILDALRYTPHPNHYNIEGALKVVEDLRPEHAILTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 Y K PS V A+DGM F+ Sbjct: 229 SYSDGAK-LPSGVEFAYDGMSFAL 251 >gi|329889611|ref|ZP_08267954.1| metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] gi|328844912|gb|EGF94476.1| metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] Length = 269 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 107/267 (40%), Positives = 145/267 (54%), Gaps = 5/267 (1%) Query: 1 MKDY--YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M ILGCG+S GVPR GDWG CDP+ P+NRRTR S+ R G T+V++ Sbjct: 1 MSGQGELEIVILGCGSSGGVPRGDGDWGDCDPSEPRNRRTRCSMLARRHGPDGV-TSVVI 59 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT PDF Q+L +V +DAVLYTH HAD HGID LR + +R I + L Sbjct: 60 DTSPDFRQQMLAAEVRHVDAVLYTHDHADQTHGIDDLRVFAAHARRRIPAWMDAATHHAL 119 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F++ YP IV + + +K GG I + Q HG I S+G+R Sbjct: 120 TRRFDYIFESH--HGYPAIVEAHRLPPHGQSWEVKGPGGPIPVMTFDQMHGPIRSVGYRL 177 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G+VAY +DV+ +LE + IIDAL+ H +H + +L+ I A+LT Sbjct: 178 GSVAYSSDVSDLDDAALEAVSGAQLWIIDALRYTPHPTHAHVDLALEWIARTEVSKAVLT 237 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 ++H+DLDY + +S PS V AFDG + Sbjct: 238 NLHIDLDYSTLSRSLPSNVEVAFDGWR 264 >gi|167762359|ref|ZP_02434486.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] gi|167700002|gb|EDS16581.1| hypothetical protein BACSTE_00713 [Bacteroides stercoris ATCC 43183] Length = 254 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 126/265 (47%), Gaps = 16/265 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I C +P++ R R+S + + +++D GPDF Sbjct: 1 MKLTILGSGTSTGVPEIGCTCPVCTSADPRDSRLRASALLHT-----DDAVILIDCGPDF 55 Query: 65 YMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR V ID VL TH H DH+ G+D LR + + I VY+ HL Sbjct: 56 RTQMLRASVYERIDGVLITHEHYDHVGGLDDLRPFCRFSE--IPVYSDAYTAAHLRARMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 YCF D+ YP + + +V E +P+ HGR+ LG+R G + Sbjct: 114 YCFV---DKKYPGVPRIYL---QEVEAGRPFYVRETEILPVTVMHGRLPILGYRIGRRLG 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ P S E+LQ LD L+I+AL+ HS+H S+ E+L E I + HM Sbjct: 168 YVTDMLTMPDASYEQLQGLDVLVINALRPQPHSTHQSIPEALAAAERIGARETYFIHMSH 227 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQF 266 + + + P V A+DGM+ Sbjct: 228 HAGLHAEIDRQLPPHVHFAYDGMEI 252 >gi|188584792|ref|YP_001916337.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349479|gb|ACB83749.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 253 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 134/265 (50%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C + KN R RSS+ I N +++DT P+F Sbjct: 1 MKVTFLGTGPSHGVPVIGCSCSVCSSKDSKNTRYRSSVIIKY-----ENNHLLIDTPPEF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q++ + ID VL+THPHADH+HG D LR + Q+ I +A+ + +K+L + Y Sbjct: 56 RLQMINNNIHRIDGVLFTHPHADHVHGFDDLRRFNEIQRESIPCFASSETVKNLKNMYSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ D T P V I ++ + PI HG+ LG+R G AY Sbjct: 116 VFRGGDPYTSSPKVTLHSISSS-------FELNGLTINPIPIYHGKSLILGYRIGRFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P +S + LQ L L+I AL+ H +H S+ E+++ + INP+ A THM DL Sbjct: 169 TDCSQIPPDSYKFLQGLHTLVIGALRYRSHPNHLSVDEAVETVNKINPEVAYFTHMTHDL 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 DY + + P + PAFD + Sbjct: 229 DYYQLNEQLPVNIKPAFDNLTIQVE 253 >gi|260063000|ref|YP_003196080.1| putative hydrolase [Robiginitalea biformata HTCC2501] gi|88784569|gb|EAR15739.1| putative hydrolase [Robiginitalea biformata HTCC2501] Length = 255 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 11/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I D C NP+++R R S+ I+ +VD GPDF Sbjct: 1 MKITFLGTGTSQGIPVIGSDDPVCLSENPRDKRLRVSVMITY----DDGYNCVVDCGPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L QV +D++L+TH HADH G+D +R +F +Q I +YA P + L F Y Sbjct: 57 RQQMLANQVTRLDSILFTHEHADHTAGMDDIRPFFFRQG-DIPIYAHPRVIASLQRRFDY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V IE G P+ H R+ GFRFG+ AY Sbjct: 116 IFTDENRYPGAPSVAVNTIEKGRA-----FRLGSHWVTPVEAWHNRLQVFGFRFGDFAYL 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV + E +LQ + L ++AL+ H SHF+L E+L IE + P+ A LTH+ + Sbjct: 171 TDVKSIEPEEAARLQGVRVLAVNALRLEPHHSHFNLEEALGFIESVGPERAYLTHISHRM 230 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + V P RV A D + + Sbjct: 231 GFHAEVESRLPDRVHLAHDNLTLTL 255 >gi|154248309|ref|YP_001419267.1| beta-lactamase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162394|gb|ABS69610.1| beta-lactamase domain protein [Xanthobacter autotrophicus Py2] Length = 269 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 151/265 (56%), Gaps = 20/265 (7%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FTILGCG+S GVPR+ WGACDP NP+NRR R S+ + RV G TTV+VDT PD Sbjct: 10 SLTFTILGCGSSGGVPRVGQGWGACDPLNPRNRRRRCSMLVERVGPNG-KTTVLVDTSPD 68 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++ E V IDAVLYTH HADH HGID LR + + +D+YA D + L + F Sbjct: 69 LREQLIGEGVTHIDAVLYTHEHADHTHGIDDLRPLAIHNRARVDIYADEDTSRMLHQRFG 128 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 YCF YPPI+ I + A +GFRFG+VAY Sbjct: 129 YCFSTPPGSAYPPILTEHRFREGRE-IVVDGA------------------VGFRFGDVAY 169 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +DVN SL L NLD +IDAL+ H SHF+L E+L + L+ PK ILT++H D Sbjct: 170 SSDVNGISENSLAHLHNLDVWVIDALRETPHPSHFTLQEALDHVALMKPKRTILTNLHTD 229 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY + P +VPA+DG++F S Sbjct: 230 LDYAALEARLPDGIVPAYDGLKFES 254 >gi|150007789|ref|YP_001302532.1| putative hydrolase [Parabacteroides distasonis ATCC 8503] gi|255013502|ref|ZP_05285628.1| putative hydrolase [Bacteroides sp. 2_1_7] gi|256840055|ref|ZP_05545564.1| metal-dependent hydrolase [Parabacteroides sp. D13] gi|298376841|ref|ZP_06986796.1| lipoate-protein ligase B [Bacteroides sp. 3_1_19] gi|149936213|gb|ABR42910.1| metal-dependent hydrolase [Parabacteroides distasonis ATCC 8503] gi|256738985|gb|EEU52310.1| metal-dependent hydrolase [Parabacteroides sp. D13] gi|298266719|gb|EFI08377.1| lipoate-protein ligase B [Bacteroides sp. 3_1_19] Length = 251 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 15/265 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G P I C +P++ R R+S+ + +++D GPDF Sbjct: 1 MKIVFLGTGTSTGNPEIGCQCEVCTSKDPRDWRLRASILVET-----EGKRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ ++ DAVL TH H DH+ G+D LR + + + +D+YA + ++ + Y Sbjct: 56 RWQMITNKIYHFDAVLVTHEHYDHVGGLDDLRPF--GRYKDVDIYAEDNVVEAIKTRIPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + YP + N ++ P + PI H ++ LGFR GN+AY Sbjct: 114 VFR---EHKYPGVPNLVLHTIGTKPFEAAG----VMITPIRVMHAKLPILGFRIGNMAYL 166 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P E KL+NLD L+IDAL+ G H SH SL E+L I I PK A L HM + Sbjct: 167 TDLKYLPEEEYAKLENLDVLVIDALRKGEHQSHESLEEALANISRIQPKEAYLIHMSHRI 226 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + +V K P V ++DG+ + Sbjct: 227 GLHAVVEKELPPHVHYSYDGLTVTF 251 >gi|255010441|ref|ZP_05282567.1| putative hydrolase [Bacteroides fragilis 3_1_12] gi|313148245|ref|ZP_07810438.1| hydrolase [Bacteroides fragilis 3_1_12] gi|313137012|gb|EFR54372.1| hydrolase [Bacteroides fragilis 3_1_12] Length = 252 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 14/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP I C +PK+ R R+S + + T+++D GPDF Sbjct: 1 MKIRILGSGTSTGVPEIGCTCAVCTSKDPKDHRLRTSALVQT-----GDATLLLDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L IDAVL +H H DH+ G+D LR + + +YA + L Y Sbjct: 56 REQMLHVPFGKIDAVLISHEHYDHVGGLDDLRPFCRF--GEVPIYAETYTAERLRSRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + TYP + N I ++ E +P+ HG++ LG+R G + Y Sbjct: 114 CFV---EHTYPGVPN---IPLREIEPNRPFLVNHTEVLPLRVMHGKLPILGYRIGKLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+LQ +D L+++AL+ H++H SLSE+L+ ++ I K HM + Sbjct: 168 TDMLTMPDESFEQLQGVDVLVMNALRVAPHNTHQSLSEALEAVKRIGAKETWFIHMSHHI 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 V K P V AFDG++ Sbjct: 228 GLQADVEKLLPPHVHFAFDGLEIE 251 >gi|170744504|ref|YP_001773159.1| beta-lactamase-like protein [Methylobacterium sp. 4-46] gi|168198778|gb|ACA20725.1| beta-lactamase-like protein [Methylobacterium sp. 4-46] Length = 269 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 113/267 (42%), Positives = 156/267 (58%), Gaps = 2/267 (0%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVDTGP 62 ILGCG+S GVPR+ WGACDP PKNRR R SL + R + G TT++VDT P Sbjct: 3 TLTLRILGCGSSGGVPRVGSGWGACDPAEPKNRRRRCSLLVEGRRAGPGPATTILVDTSP 62 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L +DAVL+TH HADH HGID +R + +R I VYA L F Sbjct: 63 DLREQLLDAAAERLDAVLFTHAHADHTHGIDDVRAMVIHMRRRIPVYADATTRALLETRF 122 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 YCF YPPI++ + + P+ + GG + A +HG +LGFRF + A Sbjct: 123 AYCFATPPGSQYPPILDLHDLPDG-APLGLDGPGGPVTATSFRMEHGNEEALGFRFADAA 181 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y DV+ P + L++LD LI+DAL++ H +HFS+S++L IE + P+ AILT++H Sbjct: 182 YAPDVSLMPEAAKAHLRDLDLLILDALRDTPHPTHFSVSDALALIEEVRPRRAILTNLHT 241 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 DLDY+ + + P VVPA+DG+ + Sbjct: 242 DLDYESLRRRLPKGVVPAYDGLTVTVE 268 >gi|95931231|ref|ZP_01313951.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95132709|gb|EAT14388.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 259 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 135/264 (51%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP I D C + +N R R S + V++DT D Sbjct: 6 LTITILGSGTSSGVPVIGCDCPVCRSAHERNARMRCSALL-----AWGEFRVLIDTATDL 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L Q+ +DAVLYTH HADH++GID LR + + I VY A + L SF Y Sbjct: 61 RQQALVHQMDRVDAVLYTHAHADHVNGIDDLRCFNALSGKDIPVYGASWMIAQLQHSFAY 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + + P + P VI P + +P+ +HG+ +G+R G++ Y Sbjct: 121 VFRQQNG-GFRPRLTPRVISG---PFELFGRL----VVPVTLRHGKDDVIGYRIGSLGYL 172 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P ++ E+LQ LD L+ID L+ H +HF+++++++ +L+ K ILTH+ D+ Sbjct: 173 TDCSEIPQQAREQLQGLDVLVIDGLRFRHHPTHFTIADAIEMAQLLQAKRVILTHLSHDV 232 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 +Y P V A+DG+ + Sbjct: 233 EYVRDSSQLPEHVEFAYDGLSVTL 256 >gi|269925256|ref|YP_003321879.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269788916|gb|ACZ41057.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 252 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 14/263 (5%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG GAS GVP + C NP+N+RTR+S IS +++D PDF Sbjct: 4 KLTFLGTGASFGVPMLGCKCRVCRSNNPRNKRTRTSALISF-----DGHNILIDASPDFR 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q L V S+DAVL+TH HADH GID LR + L+ PI Y ++ + F Y Sbjct: 59 CQALINNVDSLDAVLFTHSHADHTFGIDDLRAFSLR--EPITCYGDESTVEAIRRRFDYI 116 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F P + I+NN +E +P+ +HG + F +AY T Sbjct: 117 FSPTPHLGSRPKLRLHSIKNN-------FRVSGLEFVPLPIRHGLDCITAYMFEGIAYIT 169 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D + P +L++++++D L+++AL+ H+ H L +++ + + + L H+ DLD Sbjct: 170 DASEIPEVTLQRIKSVDVLVLNALRFEPHAMHLGLWQAVDLAKTVGAERTYLVHLGHDLD 229 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 YD V P V A+DG+Q Sbjct: 230 YDEVSSMLPDGVQLAYDGLQIEV 252 >gi|189426379|ref|YP_001953556.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422638|gb|ACD97036.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 253 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 138/265 (52%), Gaps = 13/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP + C ++P++RR+R+SL I ++VD+ D Sbjct: 1 MKIIVLGSGTSTGVPMVGCSCPVCSSSDPRDRRSRASLLIRHAG-----KNILVDSSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE V IDAVL+TH HADH++GID LRG++ ++ I YA P M+ L F Y Sbjct: 56 RSQMLREMVPQIDAVLFTHAHADHVNGIDDLRGFYFLHRQVIPCYACPATMERLLSGFGY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F T+PP++ V P + ++ +P+ +HG S G+R G+ AY Sbjct: 116 VFHQEKGATHPPLLEARV---TGGPFDLFG----LQVLPVPLEHGVDGSCGYRIGSFAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P SL LQ + +++D L+ H HF++ ++ + + + ILTH+ ++ Sbjct: 169 TDCSAIPPASLALLQGVATVVVDGLRWSPHPFHFNIEGAIAALRELGVRRMILTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 + + P+ V A+DGM F Sbjct: 229 RHAD-ERRLPNGVEFAYDGMNFELE 252 >gi|237715173|ref|ZP_04545654.1| hydrolase [Bacteroides sp. D1] gi|262408876|ref|ZP_06085421.1| hydrolase [Bacteroides sp. 2_1_22] gi|294644337|ref|ZP_06722103.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294810711|ref|ZP_06769359.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445006|gb|EEO50797.1| hydrolase [Bacteroides sp. D1] gi|262353087|gb|EEZ02182.1| hydrolase [Bacteroides sp. 2_1_22] gi|292640307|gb|EFF58559.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294442044|gb|EFG10863.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 252 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 I+G G S GVP+I C ++PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRIIGSGTSTGVPQIGCTCPVCTSSDPKDNRLRASAIVET-----DDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RTQVLHLPFERIDGVLITHEHYDHVGGLDDLRPFCRF--GSVPIYAEDYVAQGLRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I + + + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQVISVGQSFSINHTEVLPLRVMHGRLPILGYRIGQLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D L+++AL+ H +H +L E+L I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGIDVLVMNALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V K+ P + AFDG+ Sbjct: 228 GLHAEVEKNLPENIHLAFDGLDI 250 >gi|255532950|ref|YP_003093322.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255345934|gb|ACU05260.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 254 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 13/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P IT C + K++R R S+ + + T+++D+GPDF Sbjct: 1 MKITFLGTGTSQGIPVITCSCAVCQSADHKDKRLRVSVLLETA-----DKTIVIDSGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR V +DA+L+TH H DHI G+D +R + K+ ID+YA L F Y Sbjct: 56 RYQMLRAGVKDLDAILFTHEHKDHIAGLDDIRPFNYLLKKNIDIYATERVQHALRREFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P ++ I + + G E I + H ++ LGFR G Y Sbjct: 116 IFSEI-HYPGLPQIDLHTIGDEAFQV------GENEIITLDIMHYKLPILGFRIGGFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD P ++EK++ L+++AL+ H SHF+L E++ + I+ + TH+ +L Sbjct: 169 TDAKTIPDATVEKIKGTRVLVVNALQKEPHISHFTLDEAIAFAKKIDAETTYFTHISHNL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 ++ V K P+ + A+DG+ Sbjct: 229 GLHEHVEKDLPANIKLAYDGLTI 251 >gi|302383102|ref|YP_003818925.1| hypothetical protein Bresu_1991 [Brevundimonas subvibrioides ATCC 15264] gi|302193730|gb|ADL01302.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 266 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 98/261 (37%), Positives = 146/261 (55%), Gaps = 3/261 (1%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILGCG+S GVPR GDWG+CDP PKNRRTR S+ R G T+V++DT PD Sbjct: 4 LEFTILGCGSSGGVPRGDGDWGSCDPAEPKNRRTRCSMLARRRGPEGE-TSVLIDTSPDL 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +DAVL TH HAD HGID LR + L++++ I + L F Y Sbjct: 63 RQQMLAAGATRVDAVLITHDHADQTHGIDDLRVFALRRRQRIPAWMDAATKAALTHRFDY 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ YP I+ + + V + GG + + Q HG I S+G+R G ++Y Sbjct: 123 IFEMKQG--YPAILEAQDLPAHGVDWQIDGPGGAVPVVTFDQGHGPIRSVGYRLGGLSYS 180 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 +DV+A ++L ++ + I+DAL+ H +H + ++L+ I + AILT++H+DL Sbjct: 181 SDVDALDEDALRAVRGSEVWIVDALRWTRHPTHAHVDQALEWIAAADVGKAILTNLHIDL 240 Query: 245 DYDMVLKSTPSRVVPAFDGMQ 265 D++ + + P+ V A DG Sbjct: 241 DFNALRRFVPANVEIAIDGWT 261 >gi|262381702|ref|ZP_06074840.1| metal-dependent hydrolase [Bacteroides sp. 2_1_33B] gi|301310175|ref|ZP_07216114.1| metal-dependent hydrolase [Bacteroides sp. 20_3] gi|262296879|gb|EEY84809.1| metal-dependent hydrolase [Bacteroides sp. 2_1_33B] gi|300831749|gb|EFK62380.1| metal-dependent hydrolase [Bacteroides sp. 20_3] Length = 251 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 15/265 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G P I C +P++ R R+S+ + +++D GPDF Sbjct: 1 MKIVFLGTGTSTGNPEIGCQCEVCTSKDPRDWRLRASILVET-----EGKRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ ++ DAVL TH H DH+ G+D LR + + + +D+YA + ++ + Y Sbjct: 56 RWQMITNKIYYFDAVLVTHEHYDHVGGLDDLRPF--GRYKDVDIYAEDNVVEAIKTRIPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ + YP + N ++ P + PI H ++ LGFR GN+AY Sbjct: 114 VFR---EHKYPGVPNLVLHTIGTKPFEAAG----VMITPIRVMHAKLPILGFRIGNMAYL 166 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P E KL+NLD L+IDAL+ G H SH SL E+L I I PK A L HM + Sbjct: 167 TDLKYLPEEEYAKLENLDVLVIDALRKGEHQSHESLEEALANISRIQPKEAYLIHMSHRI 226 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ K P V ++DG+ + Sbjct: 227 GLHAVIEKELPPHVHYSYDGLTVTF 251 >gi|253698964|ref|YP_003020153.1| beta-lactamase [Geobacter sp. M21] gi|251773814|gb|ACT16395.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 251 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 142/264 (53%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C T+P+++RTR+S+ + +R ++VDT D Sbjct: 1 MKITILGSGTSTGVPMVGCHCQVCGSTDPRDKRTRASILVESCGQR-----ILVDTSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE + +DAVL TH HADHIHGID LRG++ +R I Y + + M+ + F Y Sbjct: 56 RAQALREGIPHVDAVLLTHTHADHIHGIDDLRGFYFIHRRIIPCYGSAETMQSASDKFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ L Y P++ P +E+ P + +P+ +HG + G+RF + AY Sbjct: 116 IFEGLRSEGYSPLLEPFPVED---PFELFGC----RVVPVPIKHGSFHATGYRFDDAAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P SL L+ L+ LIIDAL+ H +HF++ +L+ + + P+ + TH+ ++ Sbjct: 169 TDCSEIPEGSLALLEGLELLIIDALRFSPHPNHFNIEGALQVAQKLRPRRTLFTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + P+ V A+DGM Sbjct: 229 RHSDGCR-LPAGVEFAYDGMTVEL 251 >gi|283781918|ref|YP_003372673.1| beta-lactamase domain-containing protein [Pirellula staleyi DSM 6068] gi|283440371|gb|ADB18813.1| beta-lactamase domain protein [Pirellula staleyi DSM 6068] Length = 255 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 93/263 (35%), Positives = 134/263 (50%), Gaps = 14/263 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G S+GVP I + C +P++ RTR S+ + +++DT PD Sbjct: 1 MIILGTGTSVGVPAIGCNCPVCTSKDPRDNRTRCSVILGL-----EQGNLLIDTPPDLRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+LRE++ + AVL+TH HADH+ G+D LR + + +Y + +SF Y F Sbjct: 56 QLLREKIGLVHAVLFTHEHADHVFGLDDLRLFPFYLGHAVPLYCEAKVEARIRKSFDYAF 115 Query: 127 --KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAY 183 K P + I I + +PI +HG R LGFRFGNVAY Sbjct: 116 SDKPHTHEGAAPQLEFRSISVEPFEILGQ------HFMPIRLRHGPRFEVLGFRFGNVAY 169 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTD N E+L KL+ LD L++DAL+ H +HFSL E++ E +NPK I TH+ + Sbjct: 170 CTDTNGITDENLAKLEGLDVLVLDALRPRPHVTHFSLDEAVAVAEKLNPKRTIFTHISHE 229 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 L Y P+ + +DGM+ Sbjct: 230 LPYAATNDRLPTGMELGYDGMRV 252 >gi|313202614|ref|YP_004041271.1| hydrolase [Paludibacter propionicigenes WB4] gi|312441930|gb|ADQ78286.1| putative hydrolase [Paludibacter propionicigenes WB4] Length = 248 Score = 301 bits (771), Expect = 7e-80, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 133/265 (50%), Gaps = 18/265 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I C T+ K++R R+S+ I R + +++D GPD Sbjct: 1 MDILFLGTGTSTGVPEIGCKCETCLSTDIKDKRLRASVLI-----REGESQILIDAGPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L ++ + VL TH H DHI GID LR Q +YA + + ++ Y Sbjct: 56 RQQILTYKIDKLSGVLITHEHYDHIGGIDDLRPLGKSQ-----IYAEKKVCEVIQKNMPY 110 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF ++ YP + E D P + + IE PI H R+ GFR GN AY Sbjct: 111 CF---GEKRYPGSPIIELHEITDKPFYVNN----IEIQPIRVMHARLPIFGFRVGNFAYL 163 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV S+EKL+NLD L+++AL+ H SH SLSE+L+ + I K THM+ + Sbjct: 164 TDVKTIEESSIEKLRNLDILVLNALRPAPHMSHISLSEALEITKKIGAKKTFFTHMNHHM 223 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 +++V + P + A+DG++ Sbjct: 224 GFHNLVNQQLPENIQLAYDGLELKL 248 >gi|149177580|ref|ZP_01856182.1| hypothetical protein PM8797T_00197 [Planctomyces maris DSM 8797] gi|148843560|gb|EDL57921.1| hypothetical protein PM8797T_00197 [Planctomyces maris DSM 8797] Length = 275 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 14/264 (5%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S+G+P + D C +PKN+R R+S+ I ++DT P+ Sbjct: 14 EFITLGTGTSVGIPIVGCDCEVCQSPDPKNQRGRTSVYI-----GAPEGGFLIDTPPELR 68 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 +Q+LRE + + AVLYTH HADHI G+D +R + ++ I++Y + + SF Y Sbjct: 69 LQLLREHIPWVHAVLYTHSHADHIFGLDDVRISGYRLEKSIELYCEEAVEEQIRGSFNYA 128 Query: 126 FKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 F+ + P ++ I + + PI HG + LG+R N+A Sbjct: 129 FEEPTHNRHHMSRPHLDFKTISLEPFDLL------GLRIQPIRLMHGTLPILGYRINNIA 182 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 +CTDV+ P ES + L+ LD+LI+DAL+ H +HF L +SL+ +E + PK TH+ Sbjct: 183 FCTDVSEIPEESWQYLEGLDYLILDALRIKPHPTHFCLEQSLEVVERVKPKRTYFTHISH 242 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQF 266 L+++ + P V A+DG+ Sbjct: 243 SLEHEETNANLPDHVELAYDGLSL 266 >gi|197116732|ref|YP_002137159.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197086092|gb|ACH37363.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 251 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 92/264 (34%), Positives = 142/264 (53%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C T+P+++RTR+S+ + +R ++VDT D Sbjct: 1 MKITILGSGTSTGVPMVGCHCQVCGSTDPRDKRTRASILVESCGQR-----ILVDTSTDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE + +DAVL+TH HADHIHGID LRG++ +R I Y +P M+ + F Y Sbjct: 56 RAQALREGIPHVDAVLFTHTHADHIHGIDDLRGFYFIHRRIIPCYGSPGTMQSATDKFAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F L Y P++ P +E+ P + +P+ +HG + G+RF N AY Sbjct: 116 IFDGLTSEGYSPLLEPFPVED---PFELFGC----RVVPVPIKHGSFDATGYRFDNAAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P SL L+ L+ LIIDAL+ H +HF++ +L+ + + P+ + TH+ ++ Sbjct: 169 TDCSEIPEGSLPLLEGLELLIIDALRFSPHPNHFNIEGALQMAQKLRPRRTLFTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + P+ V A+DGM Sbjct: 229 RHSDGSR-LPAGVEFAYDGMTVEL 251 >gi|296122537|ref|YP_003630315.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] gi|296014877|gb|ADG68116.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] Length = 255 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 97/260 (37%), Positives = 141/260 (54%), Gaps = 8/260 (3%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG G S GVP I C NP+NRRTRS + + ++DT P+ + Sbjct: 1 MILLGTGTSHGVPIIGCHCPICLSENPRNRRTRSGVAVEAP-----EGLFLIDTSPELRI 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q++RE++ + A +YTH HADHI G+D LR + + RPI +Y + L +F Y F Sbjct: 56 QLIREKIDLVHAAIYTHSHADHIFGLDDLRLFGYRLNRPIPLYCEEIVEQQLRAAFSYAF 115 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + V + E + + +PI HG++ LGFR GNVA+CTD Sbjct: 116 VPPPPDLHMGAVPMLKFERLSLE---PFQLLGLNILPIRLMHGKLPVLGFRIGNVAFCTD 172 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 V+ P ESLE+L LD LIIDAL++ H++HF + ++L+ I+L PK A LTH+ LDY Sbjct: 173 VSFIPEESLERLMGLDVLIIDALRDTPHATHFGIPQALEIIQLTQPKRAFLTHVSHHLDY 232 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + K P V A+DG++ Sbjct: 233 ETTNKRLPPHVELAYDGLRI 252 >gi|255033829|ref|YP_003084450.1| beta-lactamase domain-containing protein [Dyadobacter fermentans DSM 18053] gi|254946585|gb|ACT91285.1| beta-lactamase domain protein [Dyadobacter fermentans DSM 18053] Length = 253 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 13/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I D C + ++R R+S+ I + ++DTGPDF Sbjct: 1 MRITFLGTGTSQGIPVIACDCVVCRSNDQHDKRLRTSVWIQVHG-----KSFVIDTGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR V S+DA ++TH H DH G+D +R + +Q+ I +Y + + + F Y Sbjct: 56 RQQMLRANVRSLDAAIFTHQHKDHTAGLDDIRAFNHRQQMDIPLYGRLEVLNQIQTEFAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D+ YP + + + + P ++ + PI H +++ GFR G+ Y Sbjct: 116 AFS---DKRYPGVPHFSLHPIENRPFEVEG----MTFTPIEVMHHKLAVYGFRIGDFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N E EK++ L++D L+ H SHF+LS++L I+ +N A LTH+ L Sbjct: 169 TDANYISEEEQEKIKGSRVLVLDTLQKEPHLSHFTLSQALDLIDKLNVPQAYLTHISHKL 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + +V P V A+DG+ Sbjct: 229 GLHAVVESELPPHVHLAYDGLVL 251 >gi|302346274|ref|YP_003814572.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] gi|302150494|gb|ADK96755.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] Length = 276 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 132/264 (50%), Gaps = 15/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 FT LG G S GVP + C +P++ R R+S + T +++D+GPDF Sbjct: 26 FTFLGTGTSNGVPVLGCSCDVCKSKDPRDNRLRTSALLETA-----KTRIVIDSGPDFRQ 80 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y I+VYA + L +F YCF Sbjct: 81 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--ALGDIEVYANENTCDGLHHNFPYCF 138 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P +N I+ + +K G IE +PI HG + LG+RFG +AY TD Sbjct: 139 -TDNPYPGVPKLNLHSIQPH-----VKFTIGDIEVMPISVMHGGLPILGYRFGKLAYITD 192 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + E L L+ ++ L+++AL+ H SH +SE++ I K LTH+ + Sbjct: 193 MKTIKEEELPYLEGVETLVVNALRWEREHHSHQLISEAIDFSRKIGAKRTYLTHLTHKIG 252 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ K P+ V A+DG++ Sbjct: 253 LHEEAQKLLPNDVFFAYDGLKIHV 276 >gi|110639169|ref|YP_679378.1| metal-dependent hydrolase [Cytophaga hutchinsonii ATCC 33406] gi|110281850|gb|ABG60036.1| metal-dependent hydrolase [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 13/262 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S G+P I C + +++R R+S+ I +++DTGPDF Q Sbjct: 5 TFLGTGTSQGIPVIACACEVCKSFDYRDKRLRTSVFIET-----DKVKLVIDTGPDFRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ ++DA+L+TH H DHI G+D +RG+ QKR + VYA + + L F Y F Sbjct: 60 MLRERIKNLDAILFTHEHKDHIAGLDDVRGFNYAQKRDMPVYARHNVIDSLKREFAYIFA 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + YP I + E + P ++ + IPI H ++ GFR + Y TD Sbjct: 120 ---EYQYPGIPRIDIHELKNEPFEIQGE----KIIPIEVMHFKLPVFGFRIQDFTYITDA 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 N +EK++ ++++AL+ H SH++L ++++ I+ INP+ A HM + Sbjct: 173 NFISDTEIEKIKGSKIVVLNALQKEAHVSHYTLEQAIEVIKHINPEQAYFVHMGHRMGKQ 232 Query: 248 -MVLKSTPSRVVPAFDGMQFSS 268 V K P + A+DG+ Sbjct: 233 ADVEKELPHNMHFAYDGLTLQL 254 >gi|262341356|ref|YP_003284211.1| metallo-beta-lactamase domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272693|gb|ACY40601.1| metallo-beta-lactamase domain protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 259 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 12/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I C NPK+ R RSS+ I + + ++D PDF Sbjct: 1 MKITFLGTGPSQGIPIIGSKHPVCLSKNPKDNRLRSSVLIEK-----NKKHFLIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR +DA+ TH H DHI G D +R + +PI VY ++++ + F Y Sbjct: 56 RYQMLRSNHEKLDAIFITHEHHDHIGGFDDIRSIYFNMNKPIPVYGLRRVLENIKKRFFY 115 Query: 125 CFKALDDR-TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 F TY ++ +++ ++ + P+ HG + LGFR N AY Sbjct: 116 IFSENKKSNTYTSKISVHELDHYKDFFFVE----YFKVFPLSIWHGSLPILGFRIENFAY 171 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHV 242 TD + P +++++L+ LD LI++ L+ H SHF+LSESL I+ I PK LTH+ Sbjct: 172 ITDASDIPFKTIQRLKGLDVLILNVLRKVPKHPSHFTLSESLNVIQKICPKKTYLTHISH 231 Query: 243 DLD-YDMVLKSTPSRVVPAFDGM 264 + + + P V A+DG+ Sbjct: 232 MIGFHKEIETQLPKNVYLAYDGL 254 >gi|300870043|ref|YP_003784914.1| metal-dependent hydrolase [Brachyspira pilosicoli 95/1000] gi|300687742|gb|ADK30413.1| metal-dependent hydrolase [Brachyspira pilosicoli 95/1000] Length = 252 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 127/264 (48%), Gaps = 12/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I C + +++RTRSS+ I N I+DT DF Sbjct: 1 MKIIFLGTGTSDGVPMIGCKCNVCKSKDKRDKRTRSSVLIQH-----KNKNYIIDTSLDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE+V S++AV YTH HADH GI LR R ID Y D M L + + Y Sbjct: 56 REQMLREKVDSLEAVFYTHHHADHSSGIVDLRSLNFMMHRHIDCYGNKDTMDVLEDKYNY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P + +IEN + I PI +HG ++ LG+RF N Y Sbjct: 116 IFNPVQIGGGIPDLEFHIIEN-------ATKFDDITVTPIPVKHGILNILGYRFNNFTYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD ++ ESL+ + + L+++ L+ HS+H SL ES+ + I K TH+ D+ Sbjct: 169 TDASSISDESLKLIDGSEILVLNGLRYRPHSTHLSLQESVNIADTIKAKKTFFTHLTHDV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 + + K P + A+DG+ Sbjct: 229 LHKNLEKELPKSMYAAYDGLTLEI 252 >gi|260173816|ref|ZP_05760228.1| putative hydrolase [Bacteroides sp. D2] gi|315922079|ref|ZP_07918319.1| hydrolase [Bacteroides sp. D2] gi|313695954|gb|EFS32789.1| hydrolase [Bacteroides sp. D2] Length = 252 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 I+G G S GVP+I C T+PK+ R R+S + + +++D GPDF Sbjct: 1 MKVRIIGSGTSTGVPQIGCTCPVCTSTDPKDNRLRASAIVET-----DDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RTQVLHLPFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GSVPIYAENYVAQGLRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ + + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEIAVGQAFSVNHTEVLPLRVMHGRLPILGYRIGQLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D L+++AL+ H +H +L E+L I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGIDVLVVNALRIATHPTHQNLEEALAVARCIQAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V KS P + AFDG+ Sbjct: 228 GLHAKVEKSLPENIHLAFDGLDI 250 >gi|317480395|ref|ZP_07939495.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] gi|316903473|gb|EFV25327.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] Length = 255 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 127/264 (48%), Gaps = 16/264 (6%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG G S GVP I C T+P++ R R+S + + +++D GPDF Sbjct: 3 KLRILGSGTSTGVPEIGCTCPVCTSTDPRDNRLRASSLLHT-----DDAVILIDCGPDFR 57 Query: 66 MQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR ID VL TH H DH+ G+D LR + + I +Y+ HL Y Sbjct: 58 EQMLRASSFEKIDGVLVTHEHYDHVGGLDDLRPF--GRFADIPIYSDAYTAAHLRARMPY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVAY 183 CF D+ YP + + +V E +P+ HGR+ LG+R G + Y Sbjct: 116 CFV---DKVYPGVPRIYL---QEVEAGQVFHINRTEVLPLRVMHGRLPILGYRIGGRLGY 169 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD++ P ES E+L+ LD L+++AL+ H +H S+SE+L+ I K HM Sbjct: 170 ITDMHMMPEESYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHH 229 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + K P V A+DG++ Sbjct: 230 AGLHADIEKQLPPHVHFAYDGLEI 253 >gi|87307192|ref|ZP_01089337.1| phnP protein-like [Blastopirellula marina DSM 3645] gi|87289932|gb|EAQ81821.1| phnP protein-like [Blastopirellula marina DSM 3645] Length = 271 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 124/260 (47%), Gaps = 10/260 (3%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G S+GVP I C +P N+R R S+ ++VDT PD Sbjct: 14 RGKLILLGTGTSVGVPAIGCGCPVCTSRDPHNKRMRCSVI-----WGLPEGNLLVDTPPD 68 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LRE++ + AV YTH HADH++G+D LR + + +Y P+ + + +F Sbjct: 69 MRSQLLREEIGIVHAVAYTHQHADHLYGLDDLRVFQFYLGHGVPLYCEPNVERQIRAAFS 128 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVA 182 Y F + P + A + PI +HG R LGFR GNVA Sbjct: 129 YAFSEITPTHVGATPALEFQRIGLNPFTVLGA----QVTPIRLKHGPRFEVLGFRIGNVA 184 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTD N PAES LQ LD LI+DAL+ H +HFSL E++ E I K TH+ Sbjct: 185 YCTDTNEIPAESFALLQGLDVLILDALRFDPHPTHFSLDEAVAMAEKIGAKQTYFTHISC 244 Query: 243 DLDYDMVLKSTPSRVVPAFD 262 +D+ P + A+D Sbjct: 245 RMDHQETNAKLPDHMQLAYD 264 >gi|298481748|ref|ZP_06999938.1| lipoate-protein ligase B [Bacteroides sp. D22] gi|298271970|gb|EFI13541.1| lipoate-protein ligase B [Bacteroides sp. D22] Length = 252 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 I+G G S GVP+I C ++ K+ R R+S + + +++D GPDF Sbjct: 1 MKVRIIGSGTSTGVPQIGCTCPVCTSSDLKDNRLRASAIVET-----DDARILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 QVL ID VL TH H DH+ G+D LR + + +YA + L Y Sbjct: 56 RTQVLHLPFERIDGVLITHEHYDHVGGLDDLRPFCRF--GSVPIYAEDYVAQGLRLRMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + + I ++ + E +P+ HGR+ LG+R G + Y Sbjct: 114 CFV---DHRYPGVPD---IPLQEISAGQSFSINHTEVLPLRVMHGRLPILGYRIGQLGYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ P ES E+L +D L+++AL+ H +H +L E+L I K HM D+ Sbjct: 168 TDMLTMPEESYEQLAGIDVLVMNALRIASHPTHQNLEEALAVARRIQAKKTYFIHMSHDM 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 + V K+ P + AFDG+ Sbjct: 228 GLHAEVEKNLPENIHLAFDGLDI 250 >gi|313207204|ref|YP_004046381.1| metal-dependent hydrolase of the beta-lactamase superfamily i; phnp protein [Riemerella anatipestifer DSM 15868] gi|312446520|gb|ADQ82875.1| metal-dependent hydrolase of the beta-lactamase superfamily I; PhnP protein [Riemerella anatipestifer DSM 15868] gi|325335357|gb|ADZ11631.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Riemerella anatipestifer RA-GD] Length = 261 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 13/266 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 LG G S G+P I + C NPK++R RSS I+ +N +++D GP Sbjct: 5 SKMKLKFLGTGTSQGIPVIGSNHPVCLSQNPKDKRLRSSAIITT----NNNKKILIDCGP 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q+L IDA+L TH H DHI G+D LR + I +Y + + F Sbjct: 61 DFRQQMLSFGESHIDALLVTHEHNDHIIGLDDLRPIIFNTNKNIPIYCLERVSNEIIQRF 120 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F YP + + + + P + PI HG++ LG++ GN+A Sbjct: 121 PYAFAT---EKYPGAPSFDLYKITNQPFELLGTL----IEPIEVLHGKLPILGYKIGNLA 173 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD ++ + LEKL+NLD LII+ L+ H+SHF L + L+ +E + PK LTH+ Sbjct: 174 YITDASSISKDQLEKLKNLDILIINCLRAEEPHASHFILPQVLELVETLKPKTTYLTHIS 233 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQF 266 L ++ + P + PA DG++ Sbjct: 234 HRLGFHNEIESLLPPHIKPAHDGLEV 259 >gi|39997560|ref|NP_953511.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|39984451|gb|AAR35838.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] Length = 251 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 96/264 (36%), Positives = 138/264 (52%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVP + C T+P+++RTR+SL I ++VDT PD Sbjct: 1 MKITILGSGTSTGVPMVGCTCSVCSSTDPRDKRTRASLLIEAAG-----RYILVDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE + IDAVL TH HADH++GID LRG+ +R I Y + M + +F Y Sbjct: 56 RRQALREHIPHIDAVLLTHSHADHVNGIDDLRGFHFIHRRVIPCYGNRETMDAVLRNFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK ++ Y P+++P VI + P + +PI HG + + G+R AY Sbjct: 116 IFKGMEAAGYAPLLDPHVIHD---PFALFGR----TIVPIHLHHGTMPATGYRIDGAAYL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P SL L LD L+IDAL+ H +HF++ +L + + PK I TH+ ++ Sbjct: 169 TDCSRIPESSLALLGGLDLLVIDALRYTPHENHFNIDGALGVVAELRPKRTIFTHLTHEV 228 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 Y ++ P V A+DGM S Sbjct: 229 AYADGIR-LPEGVEFAYDGMTVSL 251 >gi|261749134|ref|YP_003256819.1| metal-dependent hydrolase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497226|gb|ACX83676.1| metal-dependent hydrolase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 254 Score = 297 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 14/265 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C NPK++R RSS+ I + ++D PDF Sbjct: 1 MKITFLGTGTSQGVPIIGSTHPVCLSKNPKDKRLRSSILIEK-----GKKVFLIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR +DA+L TH H DHI G+D +R + +++PI VY ++ L + F Y Sbjct: 56 RYQMLRSNHQKLDAILITHEHQDHIGGLDEIRS--INREKPIPVYGLRRVLESLKKRFYY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F I + ++N ++ + P+ HG + LGFR N AY Sbjct: 114 IFSENKKSNTSKI-SIHELDNYTDFFVVE----YFKVFPLSIWHGLLPILGFRIENFAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD + P ++++L+ LD L+++ L+ HSSHF+LS+SLK I+ INPK LTH+ Sbjct: 169 TDASRIPFHTIQQLKGLDILVLNVLRKVPKHSSHFTLSDSLKMIQEINPKKTYLTHISHL 228 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFS 267 L ++ V P V A+DG+ + Sbjct: 229 LGFHEEVQTQLPKNVYLAYDGLIIT 253 >gi|196230462|ref|ZP_03129324.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196225392|gb|EDY19900.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 259 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 18/270 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G SLGVP I D C +P+++RTR+S+ + G + ++DTGPD Sbjct: 3 ELTITFLGTGTSLGVPMIGCDCRICRSPDPRDKRTRASVYVQ-----GEDYAWVIDTGPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q LRE+V IDAV++TH H DHI G+D LR + +K + VYA+P+ M+ L F Sbjct: 58 FRTQALRERVRRIDAVVFTHSHTDHIMGLDDLRPFCFGEKE-LPVYASPETMRDLERVFV 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 + F + P + I G E P+ HGR G+ Sbjct: 117 FAFNGQNR-------WPGYLRPMPYVINGPFRLGSTEITPLQVLHGRTPVNGYLLRRNGE 169 Query: 181 --VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +AY +D PA + E ++ + L++DAL+ H +H ++ E+L + + P T Sbjct: 170 PLLAYLSDCKEVPAAAREAVRGVRHLVVDALRYTPHPTHMNIEEALALAQDVCPGKTWFT 229 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+ D+ + P V A+DG++ Sbjct: 230 HLCHDVMHAEAEAELPPEVRLAYDGLKIEL 259 >gi|228471621|ref|ZP_04056395.1| octanoyltransferase [Capnocytophaga gingivalis ATCC 33624] gi|228277040|gb|EEK15726.1| octanoyltransferase [Capnocytophaga gingivalis ATCC 33624] Length = 254 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 12/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I + + +++R R+S+ +S V +D PDF Sbjct: 1 MKLTFLGTGTSQGVPVIGMNTPVAHSRDKRDKRLRTSVLLS-----WGGVNVAIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L +V ++A+L+TH HADH G+D +R + LKQ + +Y P ++ L F Y Sbjct: 56 RQQMLSHKVQHLEAILFTHEHADHTAGLDDIRPFVLKQG-DMPIYGLPRVIEQLRIRFAY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V ++ + P + E IPI +HG + LG+R G +AY Sbjct: 115 IFATENRYEGAPSVRVTEVDAS-TPFTLFGQ----EVIPIAVEHGSLPILGYRIGKLAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD L KL +D L+++AL+ H +H +++E+++ ++ ++P+ A TH+ + Sbjct: 170 TDAKHIQEAELSKLYKVDTLVLNALRKAPHPTHLNIAEAMEIVKEVHPRQAFFTHISQTM 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSS 268 + V K P V A+D + Sbjct: 230 GFHAKVQKELPKNVYLAYDKLTIKI 254 >gi|221633349|ref|YP_002522574.1| hypothetical protein trd_1369 [Thermomicrobium roseum DSM 5159] gi|221156705|gb|ACM05832.1| conserved protein [Thermomicrobium roseum DSM 5159] Length = 254 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 13/261 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S G+P I C +P++RRTRSS + V++DT P+ + Sbjct: 4 LTFLGTGTSNGIPVIGCRCRTCTSVDPRDRRTRSSAVLHL-----GEHNVLIDTAPELRL 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q + + I+AVL+TH HADHI G D LR + + P+ +YA P+ + L + Y F Sbjct: 59 QAIATGLSHIEAVLFTHAHADHIAGFDDLRQFNYLAQAPLPIYADPETARELRVRYSYAF 118 Query: 127 -KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + L P + + P + E +PI HGR + GFR G +AY T Sbjct: 119 SEPLPFYGGKPDLRLHEFDG---PFHLFGY----EIVPIPVDHGRWTVYGFRCGPIAYVT 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D PA S+E L+ ++ L+++AL++ H +H SL+E+L IE + P+ A LTH+ ++ Sbjct: 172 DAKTVPARSIELLRGVNVLVLNALRDRPHPTHLSLAEALTIIEQVCPERAYLTHVSHEVM 231 Query: 246 YDMVLKSTPSRVVPAFDGMQF 266 + P V A+DG+Q Sbjct: 232 HADWSAKLPPGVQLAYDGLQI 252 >gi|315022394|gb|EFT35421.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Riemerella anatipestifer RA-YM] Length = 255 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G+P I + C NPK++R RSS I+ +N +++D GPDF Sbjct: 1 MKLKFLGTGTSQGIPVIGSNHPVCLSQNPKDKRLRSSAIITT----NNNKKILIDCGPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L IDA+L TH H DHI G+D LR + I +Y + + F Y Sbjct: 57 RQQMLSFGESHIDALLVTHEHNDHIIGLDDLRPIIFNTNKNIPIYCLERVSNEIIQRFPY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F YP + + + + P + PI HG++ LG++ GN+AY Sbjct: 117 AFAT---EKYPGAPSFDLYKITNQPFELLGTL----IEPIEVLHGKLPILGYKIGNLAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD ++ + LEKL+NLD LII+ L+ H+SHF L + L+ +E + PK LTH+ Sbjct: 170 TDASSISKDQLEKLKNLDILIINCLRAEEPHASHFILPQVLELVETLKPKTTYLTHISHR 229 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 L ++ + P + PA DG++ Sbjct: 230 LGFHNEIESLLPPHIKPAHDGLEV 253 >gi|284038157|ref|YP_003388087.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283817450|gb|ADB39288.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 253 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 13/263 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S GVP I C + +++R R+S+ I+ + ++DTGPDF Sbjct: 3 ITLLGTGTSSGVPLIGCTCDVCRSVDFRDKRLRTSVHIAV-----DGRSFVIDTGPDFRQ 57 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 QVLR + +DAVL+TH H DH G+D +R Y + + I VY P + L F Y F Sbjct: 58 QVLRLNLQQLDAVLFTHEHKDHTAGLDEIRAYNFRSGKDIPVYGRPTVLAQLQREFAYVF 117 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + + P + I PI H ++ GFR G+ Y TD Sbjct: 118 A---ENKYPGTPHVQLHDLTNEPFEVLG----IRFTPIEVMHHKLPVYGFRIGDFTYLTD 170 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD- 245 +N E L+K+ L++DAL+ H SHF+L E++ + +N H+ L Sbjct: 171 LNYISDEELKKVYGTKVLVLDALQLKPHISHFTLDEAVALAKRVNADRTYFVHISHKLGL 230 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + V K P+ + +DG+Q S Sbjct: 231 HRDVEKELPANIRLGYDGLQISL 253 >gi|312131673|ref|YP_003999013.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] gi|311908219|gb|ADQ18660.1| beta-lactamase domain protein [Leadbetterella byssophila DSM 17132] Length = 256 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 15/267 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP +T C + +++R RSS+ I NT +++DTGPDF Sbjct: 2 ISITFLGTGTSSGVPVLTCTCEVCRSVDFRDKRLRSSVLIQ-----SENTNIVIDTGPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFESF 122 Q+L + IDAV+YTH H DH G+D +R Y + + +Y ++ + F Sbjct: 57 RQQMLNAGGVRIDAVVYTHEHKDHTAGLDDIRPYNYLRGTREHVPLYGRAHVLEQIKREF 116 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F+ P+V IEN+ I G + IPI H ++ G+R G+ Sbjct: 117 GYIFEENP-YPGVPLVKTYTIENSSFQI------GDLSLIPIEVLHYKLPVFGYRIGDFT 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD N E EK++ L+++AL+ H SHF+L ++ + + ++ TH+ Sbjct: 170 YITDANFIAEEEKEKIKGTKVLVLNALQRTPHISHFTLDQATALAQELGAEHTYFTHISH 229 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L + V K PS + AFDG+ Sbjct: 230 KLGLHHEVEKELPSGIHLAFDGLTLQL 256 >gi|86142222|ref|ZP_01060732.1| hydrolase, metal-dependent [Leeuwenhoekiella blandensis MED217] gi|85830974|gb|EAQ49431.1| hydrolase, metal-dependent [Leeuwenhoekiella blandensis MED217] Length = 230 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 12/240 (5%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHI 89 T+P+++R R S+ I ++D GPDF Q+L +V ++A+L+TH HADH Sbjct: 2 STDPRDKRLRVSILIEF-----EGANYVIDCGPDFRQQMLSNKVTHLEALLFTHEHADHT 56 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 G+D +R +F +Q I +YA + L + F Y F+ + P V + NN Sbjct: 57 AGLDDIRPFFFRQG-DIPIYAHQRVLDELKKRFEYIFETENRYPGAPAVEVYEVTNN--- 112 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 + + P+ HG++ G+RFGN AY TDV AE EKL++LD L+++AL Sbjct: 113 --VSFEINDLHVEPVNVMHGKLQVFGYRFGNFAYLTDVKTIAAEEKEKLRDLDVLVVNAL 170 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + H SHF+L E+L +E I PK TH+ L + V K P V A+DG+Q Sbjct: 171 REEPHYSHFNLEEALAFVEEIKPKKTYFTHISHLLGFHAEVEKQLPENVHLAYDGLQLEL 230 >gi|256420330|ref|YP_003120983.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256035238|gb|ACU58782.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 254 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 12/263 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C +N K++R RSS+ IS ++VDT PDF Sbjct: 1 MKVTFLGTGTSQGVPVIACGCQVCVSSNSKDKRLRSSILIS----DTPAGNIVVDTTPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR V ++AVL TH H DHI G+D +R + Q+R ID+YA + + F Y Sbjct: 57 RYQMLRAGVKHLEAVLITHSHKDHIAGMDDIRAFNYFQQRAIDIYATEFSQQVIRNEFSY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F ++ YP I + + + ++ PI H R+ +GFRF + Y Sbjct: 117 AFA---EQKYPGIPELNLRTLTNASFNVNG----LDIAPINVMHHRMPVMGFRFNDFTYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N E +K+ L+++ L+ H SHF+L E ++ + TH+ L Sbjct: 170 TDANFIAEEEKKKIIGSKVLVLNTLRKEKHISHFTLGEGIELARELGVPQVYFTHISHQL 229 Query: 245 D-YDMVLKSTPSRVVPAFDGMQF 266 ++ V P + A+DG++ Sbjct: 230 GLHEEVSAELPHGMALAYDGLEV 252 >gi|327312492|ref|YP_004327929.1| metallo-beta-lactamase domain-containing protein [Prevotella denticola F0289] gi|326944901|gb|AEA20786.1| metallo-beta-lactamase domain protein [Prevotella denticola F0289] Length = 251 Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 15/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + T VI+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLETA-----QTRVIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYCRL--GDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPKLNL---HALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGKLAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + L L+ ++ L+++AL+ H SH + E+++ I + LTH+ + Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWERPHHSHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ + P + A+DG++ Sbjct: 228 LHEEAQRRLPDGIFLAYDGLKIEV 251 >gi|260591612|ref|ZP_05857070.1| lipoate-protein ligase B [Prevotella veroralis F0319] gi|260536412|gb|EEX19029.1| lipoate-protein ligase B [Prevotella veroralis F0319] Length = 260 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 15/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + + C T+P+++R R+S + NT +I+D+GPDF Sbjct: 10 LTFLGTGTSNGVPVLGCNCEVCRSTDPRDKRLRTSALLET-----ENTRIIIDSGPDFRQ 64 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y Q IDVYA D L +F YCF Sbjct: 65 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYC--QLGDIDVYANEDTCAGLRHNFPYCF 122 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + +E + + G + +PI HG++ +R G +AY TD Sbjct: 123 T---EHLYPGVPK---LELHAIQPHSHFRIGDFDVVPINVMHGKLPIFAYRIGKLAYITD 176 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + L+ ++ L+++ L+ H SH + E+++ + I K LTH+ + Sbjct: 177 MKTIDESEFPYLEGVETLVVNGLRWTREHHSHQLIPEAIEFSKRICAKQTYLTHLTHQIG 236 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ P+ A+DG++ Sbjct: 237 LHEEAQHYLPNGFFFAYDGLKIQF 260 >gi|51598784|ref|YP_072972.1| phnP protein [Borrelia garinii PBi] gi|51573355|gb|AAU07380.1| phnP protein [Borrelia garinii PBi] Length = 253 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S+ +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLSSD----IKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + F Sbjct: 60 LLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMAHIMNAFPHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P VI + + PI K +E +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKANIIPNVIRDFE-PIFFKG----LEIVPIPLIHGEIVSLGYRIGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ES + L+NLD LIIDA++ H +H + SE++ ++ INPK + TH+ D+ ++ Sbjct: 173 KFIPEESYDYLKNLDLLIIDAIRIKSHPAHLNFSEAICEVRKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|163846959|ref|YP_001635003.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524779|ref|YP_002569250.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163668248|gb|ABY34614.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448658|gb|ACM52924.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 250 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S+GVP I D C ++P++ R R+S I R T+++D GPDF Sbjct: 1 MQLRFLGTGTSMGVPVIGCDCPICTSSDPRHHRLRTSALI-----RSHGLTILIDAGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q L + IDAVL TH H DH+ G+D LR + L+Q + V+ + + + + F Y Sbjct: 56 RIQALNAGLRRIDAVLLTHAHFDHVAGLDDLRPFCLRQG-SLPVFGSARTLADVRQRFAY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P + +E G + +PI HG +R G + Y Sbjct: 115 AFDDTSQGSSRPSITLHAVEE-------PFQIGPLTVVPIAVPHGTWMITAYRIGALGYV 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD + P ++ L+ + L+++AL+ H +H S++E+ + + + + L HM + Sbjct: 168 TDASTVPPSAVMALRGVRVLVLNALRAEPHPTHLSIAEAGRVAQEVGAQRTFLVHMTHSV 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY P V A+DG++ Sbjct: 228 DYR-ADYGLPPEVTFAYDGLEIEV 250 >gi|325269833|ref|ZP_08136443.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] gi|324987806|gb|EGC19779.1| lipoate-protein ligase B [Prevotella multiformis DSM 16608] Length = 251 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 15/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + V +T +I+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLETV-----HTRIIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYCRL--GDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPKLNL---HALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGKLAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + L L+ ++ L+++AL+ H SH + E+++ I + LTH+ + Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWERPHHSHQLIPEAVEFSRRIGARRTYLTHLTHQVG 227 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ + P V A+DG++ Sbjct: 228 LHEEAQRRLPDGVFLAYDGLRIKV 251 >gi|223939449|ref|ZP_03631326.1| beta-lactamase domain protein [bacterium Ellin514] gi|223891834|gb|EEF58318.1| beta-lactamase domain protein [bacterium Ellin514] Length = 276 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 17/271 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + FT LG G S GVP I D+ NPKN RTR S+ I+ ++VDT PD Sbjct: 2 SFSFTFLGSGTSQGVPMIGTDYPESFLANPKNHRTRPSIYIAT-----DQIKLVVDTTPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F QVLRE + +DAV++TH HADHI G+D R + + + +YA + M L F Sbjct: 57 FRTQVLRENIRWLDAVIFTHSHADHIMGLDDCRRFCDLRNGALPIYANQNTMNDLKRVFI 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----- 178 Y F I +IE G +E P+ HGR+ + G+ F Sbjct: 117 YAFHDGPWPKGYFIPEQRIIEG-------PFTIGDLEITPLPLPHGRMITNGYLFVQGGK 169 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +AY +D P E+++++ ++ ++DAL+ H +H L E+L I + T Sbjct: 170 KKLAYLSDCKEVPVEAIKQVSGVEVAVLDALRRAPHPTHMCLDEALTTARRIGAERTYFT 229 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H+ D D+D+ P V A+DG++ + Sbjct: 230 HLTHDYDHDIAQAELPPSVELAYDGLKVNYE 260 >gi|269836230|ref|YP_003318458.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785493|gb|ACZ37636.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 268 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 124/267 (46%), Gaps = 13/267 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G S G+P I C +P++RR+R+S + V++DT Sbjct: 11 GTVELTFLGTGTSNGIPIIGCSCPVCTSDDPRDRRSRTSAVVRFHG-----YHVLIDTAT 65 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + +Q L + +DAVL+TH HADH+ G D LR + +R + VYA D L E F Sbjct: 66 ELRLQALAVGLRRVDAVLFTHAHADHVGGFDDLRRFNELAQRHLPVYAHVDTAATLRERF 125 Query: 123 RYCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 Y F P + + G I+ PI HGR GFRFG + Sbjct: 126 AYAFVDQFPFYGGKPDLTLH-----EFTGGFSLFGHRIQ--PIPVWHGRWLVHGFRFGPL 178 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD P SLE ++ D L+I+AL++ H +H S+ E+L IE + P+ A L HM Sbjct: 179 VYVTDAKTIPPASLEIMRGADILVINALRHRPHPTHLSIDEALAVIEEVAPRRAYLVHMT 238 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 D+ + P V A+DG+ + Sbjct: 239 HDVSHAATSALLPPHVELAYDGLTVRT 265 >gi|219685119|ref|ZP_03539939.1| PhnP protein [Borrelia garinii Far04] gi|219673215|gb|EED30234.1| PhnP protein [Borrelia garinii Far04] Length = 253 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLSS----GIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + F Sbjct: 60 LLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMVHIMNAFSHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKANIIPNVIRDFE-PIFFK----DLKIVPIPLIHGEIVSLGYRIGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P ES L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 173 KSIPEESYNYLKNLDLLIIDAIRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKENIYLAYDGLKI 251 >gi|299136493|ref|ZP_07029676.1| beta-lactamase-like protein [Acidobacterium sp. MP5ACTX8] gi|298601008|gb|EFI57163.1| beta-lactamase-like protein [Acidobacterium sp. MP5ACTX8] Length = 267 Score = 294 bits (753), Expect = 8e-78, Method: Composition-based stats. Identities = 99/268 (36%), Positives = 139/268 (51%), Gaps = 11/268 (4%) Query: 7 FTILGCGASLGVPRITGDWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G S+GVP + C+ NRRTR S+++S V+VDTGPD Sbjct: 5 LTFLGSGTSMGVPTLGCGCAVCNSALIPGSPNRRTRPSIQVSY-----GGHNVLVDTGPD 59 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F+ Q + E + S+DAVLYTH HADHI G+D LR I +YA D + + F Sbjct: 60 FHAQAISEGIRSVDAVLYTHSHADHILGMDDLRPLSFATPEGIALYADDDTAQVIERVFE 119 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F+ +D V + + G +P++ HGR G+RFG+ AY Sbjct: 120 YTFRKVDRYPTSARVQIHRL-GTATGTAVDLFGARFVRVPVI--HGRNIIAGYRFGSAAY 176 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD++ PAESL L+ LD LI+DAL+ H SH L+ S++ +E I P+ A TH+ D Sbjct: 177 LTDMSDIPAESLPLLEGLDILILDALRREPHPSHSHLARSIELVEKIAPRRAFFTHISHD 236 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 LD++ S P + A DG++ IP Sbjct: 237 LDHESTNASLPDHIRLAHDGLKLDFEIP 264 >gi|300728185|ref|ZP_07061556.1| lipoate-protein ligase B [Prevotella bryantii B14] gi|299774611|gb|EFI71232.1| lipoate-protein ligase B [Prevotella bryantii B14] Length = 261 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 15/272 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M H T+LG G S GVP + + C +P++ R R + I +T +++D Sbjct: 1 MSKSLHITLLGTGTSQGVPVLGCECDVCRSQDPRDHRLRCAALIE-----DEHTRILIDA 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q+L+ IDAVL TH H DH+ G+D LR Y K I+++ + L + Sbjct: 56 GPDIRQQLLQVPFRKIDAVLVTHAHYDHVGGMDDLRPYC-KAFGDINIFGNETAIVSLRQ 114 Query: 121 SFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 YCF YP P + I+ ++ K + G IE PI H ++ LG+RF Sbjct: 115 MLPYCFPKDASLLYPGVPKLKLHSIKPHE-----KLSFGEIEITPISVMHDKLPILGYRF 169 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAIL 237 G AY TD+ + E L + L+++AL+ H SH + +++ + IN + L Sbjct: 170 GKFAYITDMKSMDNEEYTYLSGVKVLVVNALRFDKPHHSHQLVDDAIALAQKINAQKVYL 229 Query: 238 THMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 H+ D+ + K P + A+DGM Sbjct: 230 IHVTHDIGIHCEANKKLPEGICFAYDGMCIDV 261 >gi|255535622|ref|YP_003095993.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Flavobacteriaceae bacterium 3519-10] gi|255341818|gb|ACU07931.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Flavobacteriaceae bacterium 3519-10] Length = 254 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 14/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G+P I C T+ ++RR RSS +S S N +++D GPDF Sbjct: 1 MKLKFLGSGTSQGIPVIGCHCEVCSSTDHRDRRMRSSALVSTNS----NKKILIDCGPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L Q +IDAV+ TH H DH+ G+D LR K + + +Y + + + F Y Sbjct: 57 RFQMLDNQEDNIDAVMLTHEHNDHVIGLDDLRPLIFKNRHDMPLYCSARVGNEIKQRFSY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D YP + + E N +E P+ H I GF+ +AY Sbjct: 117 AFA---DVKYPGAPSFQLHEINGSFTLF-----DVEITPVEVMHHLIPIYGFKVNKLAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD +A EKL+NLD+LI++ ++ H +HF L + L+ + + PK LTH+ Sbjct: 169 TDASAISDAEKEKLRNLDYLILNCIRKEHPHPAHFILPQILELNKELQPKKMYLTHISHH 228 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 L + P V A+DG++ Sbjct: 229 LGRHAQTESELPENVHLAYDGLELEF 254 >gi|319901721|ref|YP_004161449.1| hydrolase [Bacteroides helcogenes P 36-108] gi|319416752|gb|ADV43863.1| putative hydrolase [Bacteroides helcogenes P 36-108] Length = 254 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 16/265 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S GVP I C +P++ R R+S + + +++D GPDF Sbjct: 1 MKLRILGSGTSTGVPEIGCTCSVCASADPRDNRLRASSLLHT-----DDAVILIDCGPDF 55 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR ID VL TH H DH+ G+D LR + I VY+ HL Sbjct: 56 REQMLRMLSFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GEIPVYSDTYTATHLRARMP 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVA 182 YCF D+ YP + + E V + E +P+ HG++ LG+R G + Sbjct: 114 YCFV---DKVYPGVPRIYLWE---VEAGIPFYVHHTEIMPVRIMHGKLPILGYRIGQRLG 167 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD+ P S E+L+ +D L+++AL+ H++H +LSE+LK I K L HM Sbjct: 168 YVTDMLTMPEASYEQLEGVDVLVMNALRLQPHATHQNLSEALKVANRIGAKETYLIHMSH 227 Query: 243 DLD-YDMVLKSTPSRVVPAFDGMQF 266 + + V + P V A+DG + Sbjct: 228 HIGLHAEVSEQLPPHVHLAYDGQEI 252 >gi|216264353|ref|ZP_03436345.1| PhnP protein [Borrelia burgdorferi 156a] gi|221218155|ref|ZP_03589621.1| PhnP protein [Borrelia burgdorferi 72a] gi|223888720|ref|ZP_03623311.1| PhnP protein [Borrelia burgdorferi 64b] gi|224532740|ref|ZP_03673357.1| PhnP protein [Borrelia burgdorferi WI91-23] gi|224533547|ref|ZP_03674136.1| PhnP protein [Borrelia burgdorferi CA-11.2a] gi|225548663|ref|ZP_03769710.1| PhnP protein [Borrelia burgdorferi 94a] gi|225549522|ref|ZP_03770488.1| PhnP protein [Borrelia burgdorferi 118a] gi|215980826|gb|EEC21633.1| PhnP protein [Borrelia burgdorferi 156a] gi|221192103|gb|EEE18324.1| PhnP protein [Borrelia burgdorferi 72a] gi|223885536|gb|EEF56635.1| PhnP protein [Borrelia burgdorferi 64b] gi|224512358|gb|EEF82742.1| PhnP protein [Borrelia burgdorferi WI91-23] gi|224513220|gb|EEF83582.1| PhnP protein [Borrelia burgdorferi CA-11.2a] gi|225369799|gb|EEG99246.1| PhnP protein [Borrelia burgdorferi 118a] gi|225370693|gb|EEH00129.1| PhnP protein [Borrelia burgdorferi 94a] Length = 253 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLE----SSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRAAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFEPFF-----FKSLKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|219684455|ref|ZP_03539399.1| PhnP protein [Borrelia garinii PBr] gi|219672444|gb|EED29497.1| PhnP protein [Borrelia garinii PBr] Length = 253 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 144/259 (55%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKLSS----GIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + +D VLYTH H DHI G D ++ F ++ P+++YA M H+ +F + F Sbjct: 60 LLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTREAPLNIYARDTTMVHIMNAFSHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKANIIPNVIRDFE-PIFFK----DLKIVPIPLIHGEIVSLGYRIGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P ES L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 173 KSIPEESYNYLKNLDLLIIDAIRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|126663850|ref|ZP_01734845.1| metal-dependent hydrolase [Flavobacteria bacterium BAL38] gi|126624114|gb|EAZ94807.1| metal-dependent hydrolase [Flavobacteria bacterium BAL38] Length = 255 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 12/262 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G S G+P I C ++ K++R R S+ I N ++++D GPDF Q+ Sbjct: 5 FLGTGTSQGIPVIGSQHSVCLSSDDKDKRLRVSVWIET-----DNNSIVIDCGPDFRQQM 59 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + IDA+L+TH HADH G+D +R +F KQ I +YA +K+L + F Y F+ Sbjct: 60 LTSKCPKIDALLFTHEHADHTAGLDDIRPFFFKQGA-IAIYAHTRVLKNLEKRFDYIFQT 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + P V + N+VP + + IPI HG + G+R N Y TDV Sbjct: 119 ENKYPGAPSVIENEV-INNVPFLVNNE----VVIPINAYHGSLQVFGYRIQNFVYLTDVK 173 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 ++K++N + L+++ L+ H++HF+L E L I L+ PK LTH+ ++ Sbjct: 174 TIETSEIDKIKNCEVLVVNCLREEQHATHFNLEEVLHFISLVQPKTTYLTHISHLFGFHE 233 Query: 248 MVLKSTPSRVVPAFDGMQFSSP 269 + P V A+D ++ + Sbjct: 234 EIQNKLPKNVFVAYDNLEINLE 255 >gi|330996961|ref|ZP_08320826.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329572035|gb|EGG53706.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 255 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 14/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP+I C T+ +++R R+S+ + T +++D GPDF Sbjct: 1 MKITFLGTGTSTGVPQIGCSCKVCRSTDARDKRLRTSVLVET-----EQTRILLDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L IDAVL TH H DH+ GID LR + + +YA+ L +S Y Sbjct: 56 RQQILPLDFRRIDAVLLTHEHYDHVGGIDDLRPF--GVFGDVQLYASERTGGQLRQSLPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF P + + ++ G ++ PI H R+ LG+R G +AY Sbjct: 114 CFVEHK-YPGVPQLRLHAVRPHEA-----FRVGELQVTPIEVMHARLPILGYRVGRMAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD+ L+ LQ L+ L+++ L++ H SH ++ E+ + L HM + Sbjct: 168 TDMKTIADCELDYLQGLELLVLNGLRHEPHYSHQTIEEACAFARRLRVPRTYLIHMGHHI 227 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFSSP 269 D + + S P V A+DG+ Sbjct: 228 DLHAVEDASLPEGVRMAYDGLVVEVE 253 >gi|195941667|ref|ZP_03087049.1| phnP protein (phnP) [Borrelia burgdorferi 80a] gi|226321011|ref|ZP_03796556.1| PhnP protein [Borrelia burgdorferi 29805] gi|226233612|gb|EEH32348.1| PhnP protein [Borrelia burgdorferi 29805] gi|312149584|gb|ADQ29655.1| PhnP protein [Borrelia burgdorferi N40] Length = 253 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLE----SSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFEPFF-----FKSLKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|325970644|ref|YP_004246835.1| beta-lactamase [Spirochaeta sp. Buddy] gi|324025882|gb|ADY12641.1| beta-lactamase domain protein [Spirochaeta sp. Buddy] Length = 257 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 12/266 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G S G+P I C T+P++ R R+S+ + + +T++VDT P Sbjct: 2 SQLEVTFLGTGTSHGIPVIGCSCPVCTSTDPRDSRYRASILLHQ-----DESTILVDTSP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 +F +Q LR + +DAVLYTH HADH +GID LR + + R + VY D + + F Sbjct: 57 EFRLQALRAGIKGLDAVLYTHDHADHFNGIDDLRVFC--KDRCLPVYCKEDVAQAIQSRF 114 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D P + +++ + G +PI HG+ FR G+ A Sbjct: 115 SYVLHGEDIAGGIPHLELKILKAYE-----PVQIGSCTVLPIPILHGKREIFAFRIGSFA 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD + P +SL + LD L++ AL+ H +H+S+ E+ + K TH+ Sbjct: 170 YATDCSEVPIQSLPYFEGLDTLVVGALRYWPHPTHYSVFEATAFARKVGAKRVYFTHLSH 229 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 L + + P + A+D + + Sbjct: 230 GLSHMTLSSELPPGYLVAYDMLHIAV 255 >gi|256819125|ref|YP_003140404.1| metallo-beta-lactamase domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256580708|gb|ACU91843.1| metallo-beta-lactamase domain protein [Capnocytophaga ochracea DSM 7271] Length = 253 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 126/264 (47%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I + TNPK++R R+S IS +T + +D PDF Sbjct: 1 MKITFLGTGTSQGIPVIASNHPVGKSTNPKDKRLRTSALIS-----WEDTNIAIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V + A+L+TH HADH G+D +R + Q + +Y + L F Y Sbjct: 56 RQQMLTNDVQHLGAILFTHEHADHTAGMDDIRPFVRLQG-DMPIYGLKRVIDELRVRFGY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V P I+ + P + PI HG + +G+R ++ Y Sbjct: 115 IFATENRYEGAPSVIPHEID--EAPFTLYGK----TVEPIHIMHGNLPIVGYRIEDLGYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD EKL++LD L+++ L++ +H +H +L+E+L+ I + PK LTH+ Sbjct: 169 TDAKYIDKSEREKLRDLDVLVLNCLRDDVHPTHLNLAEALEIIGDVQPKRTYLTHVSQTF 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 +D + K P V A+D + Sbjct: 229 GFHDEIQKRLPKNVFLAYDNLVIE 252 >gi|282877691|ref|ZP_06286506.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] gi|281300263|gb|EFA92617.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] Length = 253 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP + C+ T+P ++R R++ + + T +++D GPD Sbjct: 1 MRLTFLGTGTSGGVPSLGCHCAVCESTDPHDKRLRTAALLETQT-----TRILIDCGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ +D VL TH H DH+ GID LR + + V+A + L ++ Y Sbjct: 56 RQQLMPFTFTPLDGVLLTHVHYDHVAGIDDLRPFC--VFGSVHVFADQQTVDQLHQTMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF ++ YP + ++ V G +E +P H ++ LG+RFG++AY Sbjct: 114 CFT---EKLYPGVPR---LDLTPVVPHQPLIVGDVEVLPFQVMHDKLPILGYRFGSLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ L+ +D L+++AL+ H SH ++ E++ + I HM+ D Sbjct: 168 TDMKTIDDAEYAYLEGIDTLVVNALRYQPQHHSHMTVDEAVAFAKRIGAHRTYFVHMNHD 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ V K P+ + A+DG+Q Sbjct: 228 VGFHEEVNKQLPAGMQLAYDGLQIDV 253 >gi|325856405|ref|ZP_08172121.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] gi|325483589|gb|EGC86561.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] Length = 251 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 15/264 (5%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG G S GVP + C ++P + R R+S + T VI+D GPDF Sbjct: 1 MTFLGTGTSNGVPVLGCTCEVCKSSDPHDSRLRTSALLETA-----QTRVIIDCGPDFRQ 55 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L + ID +L TH H DH+ GID +R Y IDVYA D L +F YCF Sbjct: 56 QMLPQPFRKIDGLLITHIHYDHVGGIDDVRPYCRL--GDIDVYANADTCGGLRHNFPYCF 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + YP + + + +P G IE +P+ HGR+ G+RFG +AY TD Sbjct: 114 A---EHLYPGVPKLNL---HALPPHSHIRIGDIEVVPVNVMHGRLPIFGYRFGELAYITD 167 Query: 187 VNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + L L+ ++ L+++AL+ + H SH + E+++ I + LTH+ + Sbjct: 168 MKTMDDAELPYLEGVETLVVNALRWDRPHHSHQLIPEAVEFSRRIGARRTFLTHLTHQVG 227 Query: 246 -YDMVLKSTPSRVVPAFDGMQFSS 268 ++ + P + A+DG++ Sbjct: 228 LHEEAQRRLPDGIFLAYDGLKIEV 251 >gi|15594878|ref|NP_212667.1| phnP protein (phnP) [Borrelia burgdorferi B31] gi|218249936|ref|YP_002375039.1| PhnP protein [Borrelia burgdorferi ZS7] gi|226321839|ref|ZP_03797365.1| PhnP protein [Borrelia burgdorferi Bol26] gi|2688455|gb|AAC66903.1| phnP protein (phnP) [Borrelia burgdorferi B31] gi|218165124|gb|ACK75185.1| PhnP protein [Borrelia burgdorferi ZS7] gi|226233028|gb|EEH31781.1| PhnP protein [Borrelia burgdorferi Bol26] Length = 253 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLE----SSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDRLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFEPFF-----FKSLKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|288958661|ref|YP_003449002.1| PhnP protein [Azospirillum sp. B510] gi|288910969|dbj|BAI72458.1| PhnP protein [Azospirillum sp. B510] Length = 269 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 101/274 (36%), Positives = 139/274 (50%), Gaps = 19/274 (6%) Query: 2 KDYYHFTILGCGASLGVP----RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI 57 T+LGCG S GVP G WG CDP NPKNRR R S+ + R +V+ Sbjct: 8 TGALRVTVLGCGGSRGVPAVAGVPGGQWGRCDPANPKNRRMRPSVLVER-----DGVSVL 62 Query: 58 VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 VD+ PD Q+L +DAVL+TH HADH HGID LR + PID Y + ++ Sbjct: 63 VDSSPDLRQQLLDSGCSRLDAVLWTHQHADHCHGIDELREICRQMHAPIDAYGWDEHLRD 122 Query: 118 LFESFRYCFKALDDRT--YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + F YCF L D Y P++ I+ P +K +E P Q HG + ++G Sbjct: 123 IETRFPYCFAPLPDGYPFYRPVLKTHRIDG---PFTVKG----LEVTPFEQDHGYMRTVG 175 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKN 234 +RFG AY TDV + L +D ++D + H H L+ +L IE + P+ Sbjct: 176 YRFGGFAYSTDVVRLDDRAFAALAGVDTWMVDCGRIEPPHPVHAHLALTLTWIERVRPRR 235 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 A LTHM +DYD + + P+ V PA+DGM + Sbjct: 236 AYLTHMDNTMDYDSLRRILPAGVEPAYDGMVIAV 269 >gi|312148266|gb|ADQ30925.1| PhnP protein [Borrelia burgdorferi JD1] Length = 253 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLE----SSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F Y F Sbjct: 60 LLREKIDRLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARGTAMAHIRNAFPYNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFEPFF-----FKSLKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|315224545|ref|ZP_07866372.1| lipoate-protein ligase B [Capnocytophaga ochracea F0287] gi|314945566|gb|EFS97588.1| lipoate-protein ligase B [Capnocytophaga ochracea F0287] Length = 253 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 127/264 (48%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S G+P I + TNPK++R R+S IS +T + +D PDF Sbjct: 1 MKVTFLGTGTSQGIPVIASNHPVGKSTNPKDKRLRTSALIS-----WEDTNIAIDCSPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V ++A+L+TH HADH G+D +R + Q + +Y + L F Y Sbjct: 56 RQQMLTNDVQHLEAILFTHEHADHTAGMDDIRPFVRLQG-DMPIYGLKRVIDELRVRFGY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P V P I+ +C K PI HG + +G+R ++ Y Sbjct: 115 IFATENRYEGAPSVIPHEIDEAPFTLCGKI------IEPIHIMHGNLPIVGYRIEDLGYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD EKL++LD L+++ L++ +H +H +L+E+L+ I + PK LTH+ Sbjct: 169 TDAKYIDKSEREKLRDLDVLVLNCLRDDVHPTHLNLAEALEIIGDVQPKRTYLTHVSQTF 228 Query: 245 D-YDMVLKSTPSRVVPAFDGMQFS 267 +D + K P V A+D + Sbjct: 229 GFHDEIQKRLPKNVFLAYDNLVIE 252 >gi|323344252|ref|ZP_08084478.1| lipoate-protein ligase B [Prevotella oralis ATCC 33269] gi|323094981|gb|EFZ37556.1| lipoate-protein ligase B [Prevotella oralis ATCC 33269] Length = 253 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG G S GVP + C T+ ++R RS+ I T +++D+GPD Sbjct: 1 MKFTFLGTGTSGGVPSLGCACAVCRSTDRHDKRLRSAALIET-----DTTRILIDSGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ ID VL TH H DH+ GID LR + I++YA +K L ++ Y Sbjct: 56 RQQLMPLPFKKIDGVLLTHIHYDHVAGIDDLRPFC--VFGDINIYADESTVKALKQTMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF ++ YP + ++ + + ++ G IE P+ H R+ LG+RFGN AY Sbjct: 114 CFT---EKLYPGVP---LLRLHQIVPHLRRKIGDIEFTPVQVMHDRLPILGYRFGNFAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ A + L+ ++ L+++AL+ H SH + E+++ + + HM+ Sbjct: 168 TDMKTIEATEYKYLRGVNTLVVNALRWEKPHHSHMLVDEAVEFSRRVGARQTYFIHMNHQ 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + +D + P A+DG+Q + Sbjct: 228 IGFHDEANRRLPEGFCLAYDGLQINV 253 >gi|303237770|ref|ZP_07324329.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] gi|302482056|gb|EFL45092.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] Length = 258 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 15/269 (5%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K LG G S GVP + C NPK++R R+S + T +++D G Sbjct: 3 KVEMKLRFLGTGTSNGVPVVGCTCNVCKSNNPKDKRLRTSALVET-----DQTRILIDCG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q+L ID +L TH H DH+ GID LR Y ID++ D + L + Sbjct: 58 PDFRQQILPLPYRKIDGILVTHIHYDHVGGIDDLRPYCWL--GDIDIFTNEDTCQGLRHN 115 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 YCFK P++N ++ ++V G PI HGR+ LG+R G + Sbjct: 116 LPYCFKENP-YPGVPVLNLHAVQPHEV-----FTIGDCAIQPIEVMHGRLPILGYRIGKL 169 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 Y TD+ L L+ ++ L++ AL+ H SH + +++ + I+ K LTH+ Sbjct: 170 VYITDMKTINPSELPYLEGIETLVVSALRWEKEHHSHQLIKDAIAFSQQIHAKQTYLTHL 229 Query: 241 HVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + +D P V A+DG++ Sbjct: 230 THQIGLHDDASNLLPENVHLAYDGLEIEV 258 >gi|224534735|ref|ZP_03675307.1| PhnP protein [Borrelia spielmanii A14S] gi|224513983|gb|EEF84305.1| PhnP protein [Borrelia spielmanii A14S] Length = 254 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 140/259 (54%), Gaps = 10/259 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + SN +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFRKNKRLRSSFFLKV---SSSNIKLLIDTGPDIRQQ 60 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 61 LLRENIDRLDLVLYTHEHYDHIMGFDDIK--FYTRSAPLNIYARETTMVHIMNAFSHNFS 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P VI++ + ++ +PI HG SLG+R GN+AY TDV Sbjct: 119 SKPSVSGKADIIPNVIKDFEPFF-----FKDLKIMPIPLIHGETVSLGYRIGNLAYLTDV 173 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 174 KFIPEASYDYLKNLDLLIIDAIRTKPHPAHLNFSEAVCEVKKINPKISYFTHIAHDIMHE 233 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 234 EFDYLEKDNIYLAYDGLKI 252 >gi|288801260|ref|ZP_06406715.1| lipoate-protein ligase B [Prevotella sp. oral taxon 299 str. F0039] gi|288331871|gb|EFC70354.1| lipoate-protein ligase B [Prevotella sp. oral taxon 299 str. F0039] Length = 254 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 127/266 (47%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP + + C + K++R R+S I NT +++D GPD Sbjct: 2 IKLRFLGTGTSNGVPVLGCNCAVCKSRDSKDKRYRTSALIET-----DNTRIVLDCGPDV 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L+ I+AVL +H H DH+ GID LR + Q IDVYA K L ++ Y Sbjct: 57 RMQLLQVPFRPINAVLISHIHYDHVAGIDDLRPFC--QFGDIDVYANSSTAKALKQTMPY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + P +N IE+ +E +PI HG++ L +RFG VAY Sbjct: 115 CF-TDELYPGVPRLNLHTIESGRA-----FKVNEVEILPIKVYHGKLPILAYRFGEVAYI 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ E L+ L L+++ L+ H SH + E++ + I + LTH+ + Sbjct: 169 TDMKTIDDAEKELLKGLKVLVVNGLRWEKEHHSHQLIDEAIAFSKSIGAEKTFLTHVTHE 228 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + K P+ V A+DG++ Sbjct: 229 IGLHVQASKCLPNNVYFAYDGLEIEI 254 >gi|294673338|ref|YP_003573954.1| putative phnP protein [Prevotella ruminicola 23] gi|294473995|gb|ADE83384.1| putative phnP protein [Prevotella ruminicola 23] Length = 253 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 15/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP I C T+PK++RTR S + NT +++D GPDF Sbjct: 1 MKLTFLGTGTSCGVPVIGCQCKVCKSTDPKDKRTRCSALVET-----DNTRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + ID +L TH H DH+ G+D +R Y Q I+VYA + + E Y Sbjct: 56 RAQILPQPFRKIDGILITHSHYDHMGGMDDIRPYC--QFGAINVYANKLAKQSMLEMLPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + P + IE + + G +E +PI HG++ LG++ G + Y Sbjct: 114 CFAE-NRYPGVPAIGLHEIEPH-----VPLQIGNLEVLPIQVMHGKLPILGYKIGKLTYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ L L+ + L+++AL+ H SH + +++ + K ++ H+ D Sbjct: 168 TDMKTIDDGELTYLEGTELLVVNALRFDKPHHSHQLMDDAIAFARKVGAKQTLIIHVCHD 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + ++ V K P + A+DG + Sbjct: 228 VGLHEEVNKLLPEGIDLAYDGQEI 251 >gi|300779057|ref|ZP_07088915.1| lipoate-protein ligase B [Chryseobacterium gleum ATCC 35910] gi|300504567|gb|EFK35707.1| lipoate-protein ligase B [Chryseobacterium gleum ATCC 35910] Length = 271 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 13/268 (4%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG G S GVP I C NPK++R RSS+ ++ N +++D GP Sbjct: 15 NKMKLKFLGTGTSQGVPVIGCTCEVCTSENPKDKRLRSSVMVTTE----ENKKILIDCGP 70 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q+L ++D L TH H DH+ G+D +R K + + +Y + F Sbjct: 71 DFRQQMLTNHEHTVDIALITHEHNDHVIGLDDMRPLIFKSGKDVPLYCYSRVAHEIKNRF 130 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y F D YP + E + P + E P+ H +I+ G++F +A Sbjct: 131 PYAFA---DVRYPGAPAFELHEIENKPFEV----LDTEITPVEVIHYKITVFGYKFKKLA 183 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD EKL++LD LI++ ++ H +HF L + +K E + PK LTH+ Sbjct: 184 YITDAGFISETEKEKLKDLDVLILNCIRKFDPHPAHFILPDVIKLFEELKPKKLFLTHIS 243 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 L +D+ K P + A DG++ S Sbjct: 244 HHLGLHDIEDKELPDGIHLAHDGLELSF 271 >gi|189220269|ref|YP_001940909.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] gi|189187127|gb|ACD84312.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] Length = 286 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 15/272 (5%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG G S GVP I C +P++ RTR SL I+ + +++DT Sbjct: 25 SKQSKIVVLGSGTSQGVPMIGCPCATCHSQDPRDNRTRCSLYIT-----DGQSAILIDTP 79 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 P+ +Q LRE + + AVL+TH HADHI G D LR + + + +Y + + M+ L Sbjct: 80 PELRIQCLRENISMLTAVLFTHSHADHIMGFDDLRRFCDLSGQKLPIYGSQEVMESLARI 139 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 F Y F ++ V P VI + + G HG+ ++ G+ F Sbjct: 140 FPYAFDPSSEKKGYLRVLPHVIAPYES-----FSIGSFTITAFPLPHGQTTTFGYLFEKE 194 Query: 181 ----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 +AY D + P +++E+L +D+L ID L++ H +H S SE++ I K Sbjct: 195 GEKILAYLVDCKSVPQKTIERLSAVDYLFIDGLRDEPHPTHLSTSEAVAIARQIGAKKTF 254 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ + S P V +DG++ + Sbjct: 255 LTHITHHKSHKEREASLPKNVHVGYDGLEIAF 286 >gi|111115359|ref|YP_709977.1| phnP protein [Borrelia afzelii PKo] gi|216263557|ref|ZP_03435552.1| PhnP protein [Borrelia afzelii ACA-1] gi|110890633|gb|ABH01801.1| phnP protein [Borrelia afzelii PKo] gi|215980401|gb|EEC21222.1| PhnP protein [Borrelia afzelii ACA-1] Length = 253 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 143/259 (55%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S N +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCTSSFSKNKRLRSSFFLKVSS----NIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE + +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 60 LLRENIDKLDLVLYTHEHYDHIMGFDDIK--FYTRSAPLNIYARDTAMAHIMNAFSHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P VI + + PI K ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSVSGKADIIPNVIRDFE-PIFFKG----LKIVPIPLIHGEIVSLGYRIGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 173 KFIPEVSYDYLKNLDLLIIDAMRIKPHPAHLNFSEAICEVKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|325954959|ref|YP_004238619.1| beta-lactamase [Weeksella virosa DSM 16922] gi|323437577|gb|ADX68041.1| beta-lactamase domain protein [Weeksella virosa DSM 16922] Length = 256 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 15/262 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G S GVP I D +P+++R RSS + + + T V+VD PDF Q Sbjct: 5 TFLGTGTSQGVPVIASDHPVNFSNDPRDKRLRSSFMVEK-----NETRVVVDCSPDFRYQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE V ++DA+++TH H DH+ GID R K KR + +Y P + + F Y F Sbjct: 60 MLRENVQNLDAIVFTHEHNDHVLGIDDTRPLIFKAKRDLPIYGLPRVLNQIRVRFPYIF- 118 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVAYCTD 186 D YP I P + I P+ HG +S LG+ F +AY TD Sbjct: 119 --DGTKYPGIPQVEEHAIGLEPFYIN----DIHIQPVEVMHGGLSILGYIFDKKIAYLTD 172 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 V + P ++LEKL+NLD L++ AL+ H +H L+++++ + + PK TH+ V++ Sbjct: 173 VKSLPEKTLEKLENLDVLVLSALRQENPHHAHLLLADAIEITQKLQPKQTYFTHISVEMG 232 Query: 246 -YDMVLKSTPSRVVPAFDGMQF 266 Y+ V P + A+D MQ Sbjct: 233 FYEEVNSLLPKGMDLAYDKMQI 254 >gi|225552239|ref|ZP_03773179.1| PhnP protein [Borrelia sp. SV1] gi|225371237|gb|EEH00667.1| PhnP protein [Borrelia sp. SV1] Length = 253 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 137/259 (52%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCKVCTSSYSKNKRLRSSFFLE----SSSGIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRCAPLNIYARDTAMAHIRNAFPHNFT 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + VI + + ++ +PI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSLSGKADIIANVIRDFEPFF-----FKSLKIVPIPLIHGDIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE+ I+ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAFCVIKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFDYLEKDNIYLAYDGLKI 251 >gi|171915795|ref|ZP_02931265.1| metallo-beta-lactamase superfamily protein [Verrucomicrobium spinosum DSM 4136] Length = 261 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 17/272 (6%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D T LG G S+G+P I D C ++P+++R+RSS+ + R T +VDTGP Sbjct: 2 DSLQITFLGTGTSVGIPMIGCDCATCTSSDPRDQRSRSSILV-----RTPEGTYVVDTGP 56 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 DF Q LRE++ +DA LYTHPH DH+ G D LR + + + + +Y P C++ + + Sbjct: 57 DFRTQCLREKLKELDAALYTHPHMDHLTGFDDLRRFCVPEDAVMPIYGTPACLQVIRRMY 116 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 + F + Y + P + P+ + G P+ +HG++ ++G+ F Sbjct: 117 EHAFNG--ENRYRGYLKP-----EEHPVTGPFSLGGTLITPLPVKHGKVETVGYLFSRGG 169 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 AY +D+ ++E ++ +D LI+DAL++ H +H + E+L + P+ Sbjct: 170 RKLCAYLSDMKEPLEGTVELMKGVDTLIVDALRHTPHPTHMNFEEALAFRTAVGPRQTWF 229 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 TH+ ++ + + P V A+DG++ S P Sbjct: 230 THIQCEIRHAQEEQKLPEDVRIAYDGLKLSWP 261 >gi|161075665|gb|ABX56580.1| putative coenzyme PQQ synthesis protein G [Methylacidiphilum infernorum V4] Length = 266 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 15/272 (5%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG G S GVP I C +P++ RTR SL I+ + +++DT Sbjct: 5 SKQSKIVVLGSGTSQGVPMIGCPCATCHSQDPRDNRTRCSLYIT-----DGQSAILIDTP 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 P+ +Q LRE + + AVL+TH HADHI G D LR + + + +Y + + M+ L Sbjct: 60 PELRIQCLRENISMLTAVLFTHSHADHIMGFDDLRRFCDLSGQKLPIYGSQEVMESLARI 119 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 F Y F ++ V P VI + + G HG+ ++ G+ F Sbjct: 120 FPYAFDPSSEKKGYLRVLPHVIAPYE-----SFSIGSFTITAFPLPHGQTTTFGYLFEKE 174 Query: 181 ----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 +AY D + P +++E+L +D+L ID L++ H +H S SE++ I K Sbjct: 175 GEKILAYLVDCKSVPQKTIERLSAVDYLFIDGLRDEPHPTHLSTSEAVAIARQIGAKKTF 234 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ + S P V +DG++ + Sbjct: 235 LTHITHHKSHKEREASLPKNVHVGYDGLEIAF 266 >gi|282881697|ref|ZP_06290360.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] gi|281304456|gb|EFA96553.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] Length = 253 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S GVP + C+ +P ++R R++ + T +++D GPD Sbjct: 1 MKLTFLGTGTSGGVPSLGCHCAVCESHDPHDKRLRTAALLET-----DTTRILIDCGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++ +DAVL TH H DH+ GID LR + + +YA + L + Y Sbjct: 56 RQQLMPFPFQPLDAVLLTHIHYDHVAGIDDLRPFC--VFDSLQIYADEPTAEALHRTMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF A P+++ V++ + + G I+ +P H ++ LGFRFG+ AY Sbjct: 114 CFGAH-LYPGVPLLDLHVVQPHQ-----ELRIGDIDIMPFQVMHHKLPILGFRFGSFAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ E + L + L+++AL+ H SH +++E+++ + K L HM Sbjct: 168 TDMKTIRDEEMPFLSGVKTLVVNALRYEPQHHSHMTVAEAIEFTNRVGAKQTYLVHMSHG 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + + V P + A+DG+Q Sbjct: 228 IGLHHDVNLQLPDDIQLAYDGLQIEV 253 >gi|309792277|ref|ZP_07686749.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308225818|gb|EFO79574.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 242 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 13/254 (5%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 +GVP I D C +P+NRR R+S + R S+ T+++D GPDF +Q L + Sbjct: 1 MGVPVIGCDCAVCSSADPRNRRMRTSALL-----RTSDHTILIDAGPDFRLQALHAGLRH 55 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 IDAVL TH H DHI GID LR + + ++ +P + + F Y F + Sbjct: 56 IDAVLLTHAHFDHIAGIDDLRPLT-EHGDCLPIFGSPHTIHEVRSRFDYAFTETSAGSTC 114 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 P + +E++ A G P+ HG +R G + Y TD + P +S Sbjct: 115 PRIELHSVESS-------FAIGQTSITPLAIIHGTWEITAYRIGGLGYVTDASHIPPDSY 167 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 E L+NLD L+++AL+ H +HF+L+E+L+ I + P+ A L HM D+ P Sbjct: 168 EGLRNLDVLVLNALRYEAHPTHFTLAEALEVIRDLQPRRAFLVHMTHAFDHASASAQLPE 227 Query: 256 RVVPAFDGMQFSSP 269 V A+DG++ P Sbjct: 228 GVAFAYDGLEIEIP 241 >gi|224532233|ref|ZP_03672865.1| PhnP protein [Borrelia valaisiana VS116] gi|224511698|gb|EEF82104.1| PhnP protein [Borrelia valaisiana VS116] Length = 253 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 143/259 (55%), Gaps = 11/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS GVP + C + KN+R RSS + S +++DTGPD Q Sbjct: 4 TFLGTGASSGVPMLNCSCRVCASSFSKNKRLRSSFFLRLSS----GIKLLIDTGPDIRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE++ +D VLYTH H DHI G D ++ F + P+++YA M H+ +F + F Sbjct: 60 LLREKIDKLDLVLYTHEHYDHIMGFDDIK--FYTRDVPLNIYARDTTMVHIMNAFSHNFS 117 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + V P VI + + PI K ++ IPI HG I SLG+R GN+AY TDV Sbjct: 118 SKPSVSGKADVIPNVIRDFE-PIFFKG----LKIIPIPLIHGEIISLGYRVGNLAYLTDV 172 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S + L+NLD LIIDA++ H +H + SE++ +++ INPK + TH+ D+ ++ Sbjct: 173 KFIPEASYDYLKNLDLLIIDAMRIKPHPAHLNFSEAVCEVKKINPKISYFTHIAHDIMHE 232 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG++ Sbjct: 233 EFEYLEKDNIYLAYDGLKI 251 >gi|83593034|ref|YP_426786.1| beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] gi|83575948|gb|ABC22499.1| Beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] Length = 267 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 104/271 (38%), Positives = 131/271 (48%), Gaps = 10/271 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDTGPD 63 ILGCG + GVP I WGACDP P+NRR R S+ I E G+ ++VD PD Sbjct: 1 MRIRILGCGGAAGVPAIAAGWGACDPGEPRNRRLRPSILIEEDGEGGAPPHRLLVDASPD 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V ++D V+ TH HADH HGID LR R +D++A + + L + F Sbjct: 61 LRQQLLGAGVRALDGVVITHAHADHTHGIDDLREINRAMGRSLDLWATAEVLGDLCQRFD 120 Query: 124 YCFKALD---DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 YCF AL Y P++ P I I G Q HG +LG R G Sbjct: 121 YCFTALAAEATSIYKPMIVPREITTPSFTI------GAFPLRTFPQSHGWGETLGLRIGA 174 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TDV A + L +D I+D H +H L ++L IE + P+ AILTHM Sbjct: 175 FAYSTDVVALDEAAFAALAGIDTWIVDCFALQPHPTHAHLDKTLAWIERLKPRQAILTHM 234 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 LDY L P VVPA DGM P Sbjct: 235 GPGLDYRATLDRLPPGVVPAHDGMIIEVHEP 265 >gi|332184921|ref|ZP_08386670.1| metallo-beta-lactamase superfamily protein [Sphingomonas sp. S17] gi|332014645|gb|EGI56701.1| metallo-beta-lactamase superfamily protein [Sphingomonas sp. S17] Length = 254 Score = 288 bits (737), Expect = 6e-76, Method: Composition-based stats. Identities = 100/266 (37%), Positives = 133/266 (50%), Gaps = 18/266 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILGCG S GVPRI DWGACDP P+NRR R S + N +++DTGPD Sbjct: 1 MKIRILGCGTSSGVPRIGNDWGACDPQEPRNRRMRQSALVEH-----DNVHILIDTGPDM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V ++DAV++TH HADH HGID LR + P+ YA P+ + L F Y Sbjct: 56 REQLLAADVATVDAVIWTHDHADHCHGIDDLRQIYHALGEPVTGYARPNTAQSLQNRFGY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F YPP E++ G I + Q HGRI S G RF + Sbjct: 116 VFHG--KTGYPPTATMAAFEDS-------LTIGDIHIRSVDQPHGRICSAGLRFECNGKS 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + E + +D I+DAL+ H +H L L IE + PK ++L HM Sbjct: 167 IGYATDFHDLTPEMAALYEGVDIWIVDALRRHPHPAHADLPSVLHWIEALRPKRSVLIHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 +DY + + P V PA+DGM+ Sbjct: 227 DQSMDYATLCRELPDHVEPAYDGMEL 252 >gi|83311545|ref|YP_421809.1| beta-lactamase superfamily hydrolase [Magnetospirillum magneticum AMB-1] gi|82946386|dbj|BAE51250.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Magnetospirillum magneticum AMB-1] Length = 257 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 104/266 (39%), Positives = 145/266 (54%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG + GVP I+G WGACDP NP+NRR RSS+ + NT ++VDT PD Sbjct: 1 MKVTILGCGGAAGVPTISGGWGACDPANPRNRRLRSSILVEE-----GNTRILVDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L V S+DAV+YTH HADH+HGID LR ++ + V+ + F Y Sbjct: 56 RDQFLAAGVKSVDAVIYTHDHADHLHGIDDLREVNRVTRKWLPVWGDAATLATARARFPY 115 Query: 125 CFKALDDRT---YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F+ LDD Y P++ I G I IP Q HG +LG RFG++ Sbjct: 116 AFEPLDDIGEFIYRPLLEVREISG-------PFHVGEIGVIPFDQDHGYCRTLGLRFGSI 168 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AY TDV P ++ + L+ +D II L + H +H ++++L I+ + P+ A +THM Sbjct: 169 AYSTDVVDLPPQAFKALEGVDTWIIGCLVDYPHQTHAHIAKALDWIDCVKPRRAYITHMG 228 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFS 267 LDY+ V ++ P V+PA DG+ Sbjct: 229 SRLDYEAVRRAVPPHVIPAHDGLVIE 254 >gi|317503062|ref|ZP_07961140.1| lipoate-protein ligase B [Prevotella salivae DSM 15606] gi|315665816|gb|EFV05405.1| lipoate-protein ligase B [Prevotella salivae DSM 15606] Length = 255 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 130/264 (49%), Gaps = 13/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP + + C +P +RR R+S+ I S T +++D GPDF Sbjct: 1 MKVTLLGTGTSQGVPVLGCNCEVCKSNDPHDRRFRTSVLIETAS-----TRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L + IDAVL TH H DH+ GID LR + + I++Y+ D +K L + Y Sbjct: 56 RMQMLAQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--RFGDINIYSNTDVIKGLKHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF D YP + I+ +++ + G IE +PI H ++ LG+R G +AY Sbjct: 114 CFPEKGD-LYPGVPRLIL---HEIKPHVGFNIGDIEVMPITVMHDKLPILGYRIGKLAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ + E L + L+I+AL+ H SH + +++ + K L HM + Sbjct: 170 TDMKNIEEKEFEYLSGISVLVINALRWKREHHSHQLVDDAISFARKLGVKRVFLIHMTHE 229 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + + PS + FDG Sbjct: 230 IGLHAKANLLLPSGIQFGFDGETI 253 >gi|253999086|ref|YP_003051149.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|313201187|ref|YP_004039845.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|253985765|gb|ACT50622.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] gi|312440503|gb|ADQ84609.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 254 Score = 287 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 92/265 (34%), Positives = 136/265 (51%), Gaps = 11/265 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G P + C ++ +N+RTR S I+ + V++DTGPD Sbjct: 1 MQLTMLGVGSSAGTPVVGCQCATCRSSDARNKRTRCSSAITFP----NGEVVLIDTGPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE + +DAVLYTH HADH+HGID LR + Q++ I +Y D + H+ + F Y Sbjct: 57 RFQALREGLNRVDAVLYTHTHADHLHGIDDLRAFCQIQRKQIPLYGKADALAHIADKFGY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + D P++ ++ P + PI +HG LGFR GN+AY Sbjct: 117 TIREPSDFWDLPVLGLNEVKA---PFELFGQ----TVTPIPVKHGYSDILGFRIGNLAYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV+ P SL LQ LD L++D L+ H +H +L +SL+ +I + L HM ++ Sbjct: 170 TDVSEIPEASLPLLQGLDVLLLDCLRYKPHYTHINLEQSLEYAAMIAAADTYLIHMTHEM 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSP 269 +Y V P V +DG+Q Sbjct: 230 EYAAVSALLPPNVHVGYDGLQLHFE 254 >gi|218672197|ref|ZP_03521866.1| probable metal-dependent hydrolase protein [Rhizobium etli GR56] Length = 216 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 117/214 (54%), Positives = 147/214 (68%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +VDTGPDF Q++R +DAVLY+HPHADHIHGID LRGYF +R + ++A M Sbjct: 1 VVDTGPDFREQMIRAGADHVDAVLYSHPHADHIHGIDDLRGYFHNTRRRVPIFADQYTMD 60 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L E+FRYC + YPPIV P+VIEN D P+ ++ GG I+ P +QQHG I SLGF Sbjct: 61 RLREAFRYCLETPPGSNYPPIVLPVVIENIDEPVEIRGPGGKIDFYPHIQQHGDIHSLGF 120 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R G+VAYC+D++ FP ++++KLQNLD LIIDAL+ H SH SL +SL I + PK AI Sbjct: 121 RIGDVAYCSDISDFPPQTVDKLQNLDVLIIDALQYTYHPSHLSLEQSLDWISRLKPKRAI 180 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 LTHMH LDYD V+ TP VVPAFD M F + Sbjct: 181 LTHMHTPLDYDAVMAETPEHVVPAFDQMSFEIEV 214 >gi|320537741|ref|ZP_08037666.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] gi|320145420|gb|EFW37111.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] Length = 270 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 90/273 (32%), Positives = 138/273 (50%), Gaps = 18/273 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G S G+P I + C +P++ R R+S I R ++++D GP+F Sbjct: 1 MRLEILGSGTSHGIPVIGCNCSVCTSADPRDTRYRASAWI-RPKNNSEKPSILIDCGPEF 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q LR + ++DAVL TH HA+H+HG+D LR + K + +Y C + + + F Y Sbjct: 60 RLQALRAGMQNLDAVLLTHSHANHVHGLDDLRIFSYKT--SLPIYLEKYCAEDIKKRFSY 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P + VIE+++ +K + I HGRI G+R N AY Sbjct: 118 VFTHAYEGGGIPHFSLHVIEDSNPVFYLKG----VRIEAIPLIHGRIIDFGWRIENTAYL 173 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD N P S EKL+ L LIID L+ H +HF +ESL I+ I P+ A LTH+ D+ Sbjct: 174 TDCNFIPDSSFEKLKGLKNLIIDGLRVRKHITHFCFAESLDAIKRIAPQKAWLTHICHDV 233 Query: 245 DY-------DMVLKSTPS----RVVPAFDGMQF 266 + + ++ P ++ PA+DG+ Sbjct: 234 SHKEICAIIEEAQQNDPELAKIKISPAYDGLII 266 >gi|258542243|ref|YP_003187676.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01] gi|256633321|dbj|BAH99296.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01] gi|256636380|dbj|BAI02349.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-03] gi|256639433|dbj|BAI05395.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-07] gi|256642489|dbj|BAI08444.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-22] gi|256645544|dbj|BAI11492.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-26] gi|256648597|dbj|BAI14538.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-32] gi|256651650|dbj|BAI17584.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654641|dbj|BAI20568.1| metal-dependent hydrolase PhnP [Acetobacter pasteurianus IFO 3283-12] Length = 264 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 13/272 (4%) Query: 5 YHFTILGCGASLGVPRITGD-----WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 T+LGCG S GVP + G WGAC+P P+N RTRSS+ + + G V+VD Sbjct: 1 MKITVLGCGGSAGVPMVGGADGHGIWGACNPKEPRNTRTRSSILLRLKNGAG----VLVD 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L + +++++TH HADHI G+D +R ++P+ Y A + ++ + Sbjct: 57 TGPDLRAQLLANGIKDFESIIFTHAHADHISGLDEVRAINRVIQKPLHAYGAAETLEDIQ 116 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y FK PP V+E + V + E I Q HGR+ S G R G Sbjct: 117 RRFDYVFKP----WTPPNFFRAVVEAHPVKMGQPVTISGTEFILFDQVHGRVGSTGVRCG 172 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + Y TDV FP +S+E L+ +D ++D + HS+H L L+ + INP+ ILTH Sbjct: 173 DFVYSTDVMEFPEDSVEVLRGVDTWMVDCFQRQPHSAHAWLERVLEWQQAINPRRMILTH 232 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 M D+D+ + P+ + PA+DG F P Sbjct: 233 MGPDMDWQWMQDHLPAGIEPAWDGAVFEVADP 264 >gi|307565645|ref|ZP_07628123.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] gi|307345677|gb|EFN91036.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] Length = 257 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 121/268 (45%), Gaps = 15/268 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK T LG G S GVP I + C T+P ++R R+S I NT ++VD Sbjct: 1 MKHNMKVTFLGTGTSNGVPFIGCNCEVCKSTDPHDKRLRTSALIET-----ENTRLLVDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L ID VL TH H DH+ GID LR + ID+Y+ L Sbjct: 56 GPDFRQQILPYPFRKIDGVLLTHIHYDHVGGIDDLRAFC--SLGDIDIYSNKHTCDGLRH 113 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + YCF P +N IE + K + G E PI HG++ L +R G Sbjct: 114 NMPYCF-TDHLYPGVPKLNLHCIEPHQ-----KFSIGDFEIEPIEVIHGKLPILAYRIGT 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTH 239 +AY TD+ + L+ + LII+ L+ H SH + E++ +LI + L H Sbjct: 168 LAYITDMKTINPVEVPSLKGVKTLIINGLRWERPHHSHQLIPEAIAFSQLIKAEQTYLIH 227 Query: 240 MH-VDLDYDMVLKSTPSRVVPAFDGMQF 266 M + K P V A+DG+ Sbjct: 228 MTDKAGFHAESQKRLPDNVHFAYDGLTL 255 >gi|330837292|ref|YP_004411933.1| beta-lactamase domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329749195|gb|AEC02551.1| beta-lactamase domain protein [Spirochaeta coccoides DSM 17374] Length = 259 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 11/260 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 G G S G+P I D C ++ ++ R R+S I R + VDTGP+F +Q+ Sbjct: 7 FFGTGTSHGIPVIGCDCPTCASSDSRDTRLRTSTLI-----REDERRIAVDTGPEFRLQM 61 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR V ++DAVLYTH HADH++GID LR + +P VY + + L F Y A Sbjct: 62 LRAAVPALDAVLYTHSHADHMNGIDDLRIFCY--DKPFPVYGSKGTIDDLLVRFPYVVSA 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + ++ N + + + +P+ HG + + G+R G AY TD N Sbjct: 120 HSKYHGDGLPH---LDVNVLNPGIPVEIAGFQVVPVPIVHGGLVAFGYRIGGFAYLTDCN 176 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YD 247 P ES L+ LD +++D L+ H +HFS+S++++ I LTH+ D + Sbjct: 177 FIPEESYFLLEGLDVVVLDGLRFTSHPTHFSISQAIEAANRIGASRTYLTHISHDAGLHA 236 Query: 248 MVLKSTPSRVVPAFDGMQFS 267 + K PS + A+DG+ Sbjct: 237 DIEKKLPSGICLAYDGLILE 256 >gi|226226511|ref|YP_002760617.1| hypothetical protein GAU_1105 [Gemmatimonas aurantiaca T-27] gi|226089702|dbj|BAH38147.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 267 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 7/267 (2%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP+I C +P+++RTR I G +++DT P+ Sbjct: 1 MRLIFLGTGTSFGVPQIGCGCPVCRSEDPRDKRTRCGAVIEVDGVEGP-VRLLIDTPPEL 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q++ V S+DAVLYTH HADHIHGID LR +++ P+ +Y + L F Y Sbjct: 60 RLQLVAAGVSSVDAVLYTHEHADHIHGIDDLRAITIRRTSPLPMYGEAHTLTTLAARFPY 119 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHGRISSLGFRFGNVA 182 D + P+ E + + A V + +P HGRI+ +R G++ Sbjct: 120 VV----DPSMRPLPGTTRPEGTPIAVTPGVAFDVRGVTVLPFTVPHGRITVTAYRVGDIG 175 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TD P ++L L + L+++AL H SH S+ E++ L+ + TH+ Sbjct: 176 YVTDAKTLPPDALAALTGVRVLVVNALLRHTHPSHLSIDEAITMARLVGAERTYFTHLTH 235 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 D + + P+ + PA+DG+ P Sbjct: 236 DNFHAALAAELPAGIEPAYDGLVVDLP 262 >gi|329113412|ref|ZP_08242193.1| Octanoyltransferase [Acetobacter pomorum DM001] gi|326697237|gb|EGE48897.1| Octanoyltransferase [Acetobacter pomorum DM001] Length = 264 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 95/272 (34%), Positives = 139/272 (51%), Gaps = 13/272 (4%) Query: 5 YHFTILGCGASLGVPRITGD-----WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 T+LGCG S GVP + G WGAC+P P+N RTRSS+ + + G V+VD Sbjct: 1 MKVTVLGCGGSAGVPMVGGADGHGIWGACNPKEPRNTRTRSSILLRLKNGAG----VLVD 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L + ++++TH HADHI G+D +R ++P+ Y A + ++ + Sbjct: 57 TGPDLRAQLLANGIKDFQSIIFTHAHADHISGLDEVRAINRVIQKPLHAYGAAETLEDIQ 116 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y FK PP V++ + V + E Q HGR+ S G R G Sbjct: 117 RRFDYVFKP----WTPPNFFRAVVQAHPVEMEQPITISGTEFTFFNQVHGRVGSTGVRCG 172 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y TDV FP SL+ L+ +D ++D + HS+H L L+ + +NP+ ILTH Sbjct: 173 GFVYSTDVVEFPEASLDILRGVDTWMVDCFQRQPHSAHAWLERVLEWQQALNPRRMILTH 232 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 M D+D+ + P+ V PA+DG F P Sbjct: 233 MGPDMDWQWMQDHLPAGVEPAWDGAVFEVADP 264 >gi|294011650|ref|YP_003545110.1| PhnP protein [Sphingobium japonicum UT26S] gi|292674980|dbj|BAI96498.1| PhnP protein [Sphingobium japonicum UT26S] Length = 259 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 99/269 (36%), Positives = 140/269 (52%), Gaps = 18/269 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G S GVPRI DWGACDP PKNRRTR+S+ I + T +++DT PD Sbjct: 2 SLKLTILGSGTSSGVPRIGNDWGACDPQEPKNRRTRASILIESPT-----TRLLIDTSPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V+ IDA+L+TH HADH HG+D +R + + P+ YA P ++ L E F Sbjct: 57 MRAQLLAADVVRIDAILWTHDHADHSHGLDDVRQLYHHRGTPVPGYARPQTLRLLRERFG 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y F+ Y P + P + + G I Q HG I S GFRF Sbjct: 117 YAFEG--RHGYHPTIEPHALPDG-------LRIGDISIACTDQPHGEIFSTGFRFTHDGH 167 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ Y TD + A+ L LD ++DAL+ H +H L+ +L ++ + P+ AIL H Sbjct: 168 SIGYATDFHDITADMLALYDGLDIWVVDALRERPHPTHAHLALTLDAVQAVRPRRAILIH 227 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 M +DY + ++ P V P +DG+ Sbjct: 228 MDQSMDYATLCRTLPEGVEPGYDGLVAEL 256 >gi|119953316|ref|YP_945525.1| metal-dependent hydrolase [Borrelia turicatae 91E135] gi|119862087|gb|AAX17855.1| metal-dependent hydrolase [Borrelia turicatae 91E135] Length = 252 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 12/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 LG G+S GVP ++ D C KN+R RSS I+ +++DTGPD Q Sbjct: 4 IFLGTGSSSGVPMLSCDCRVCSLNFGKNKRLRSSFLINLYG-----MNLLIDTGPDIREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE ++ +D VLYTH H DHI G+D ++ F + P+ +YA M+H+ +F + F Sbjct: 59 LLRENIVKLDLVLYTHEHYDHIMGLDDIK--FYTRGAPLSIYARESTMQHIRNAFPHNFS 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P + + I+ +PI HG I SLG+R N+AY TDV Sbjct: 117 SKVSISGKANIIPNLAVDLQQIFFR-----GIKIMPIPLLHGDIISLGYRINNLAYLTDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P S L+ LD L+IDAL+ H H + +++ +++ I+PK A TH+ D+ ++ Sbjct: 172 KFIPEISYNYLKGLDVLVIDALRLKPHPGHLNFDDAIVEVKKIDPKIAYFTHISHDVMHE 231 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG+Q Sbjct: 232 EFDYLKRDNIYLAYDGLQI 250 >gi|251772624|gb|EES53189.1| putative metallo-beta-lactamase family protein [Leptospirillum ferrodiazotrophum] Length = 259 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 13/261 (4%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G+S+GVP I C + +N RTRSSL ++ ++VDT PD +Q Sbjct: 11 FLGTGSSVGVPMIGCRCAVCLSPDRRNHRTRSSLLVTV-----GGKNILVDTSPDLRIQS 65 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR + +DAV+YTH HADH+ G+D LR + Q I +YA + + F Y F Sbjct: 66 LRHGLDRVDAVIYTHAHADHVLGLDELRTFNFIQGGEIPIYAPSRVLDKVRAMFSYAFSD 125 Query: 129 LDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 ++ P + P ++ + P L +HG + R G++ Y TD Sbjct: 126 VNREGVTRPDLVPHALDGPREIFGLP-------VRPFLVEHGPTRNAALRLGDLVYLTDC 178 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 NA E E ++ +++ ++ H SHF L ++L +I + P++A +TH+ +D+ Sbjct: 179 NAVLPEGKEVMKGARTMVVGVVRYEPHISHFGLDQALAEIREVGPESAYITHISHRMDHA 238 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + P + PA+DG++ S Sbjct: 239 TLESQLPPGIRPAYDGLRISL 259 >gi|114327743|ref|YP_744900.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] gi|114315917|gb|ABI61977.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] Length = 263 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 16/268 (5%) Query: 5 YHFTILGCGASLGVPRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 ILGCG S GVP++ G DWGACDP+ P+N+RTRSS+ I + +++D Sbjct: 2 MRVVILGCGGSAGVPQLGGEDGRGDWGACDPSEPRNQRTRSSILIEQ-----DGRRLLID 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L + IDAVL+TH HADHI G+D +R +PID Y +P ++ L Sbjct: 57 TGPDLRAQLLATGIAGIDAVLFTHAHADHITGLDDVRILNRLTGKPIDAYGSPKTIEELT 116 Query: 120 ESFRYCFKALDDRT-YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F+ Y P++ P + + AG + + Q HG + SLG R Sbjct: 117 LRFDYAFRPWKPSGFYRPVLVPHQVAAGQ---DLTIAGFPVTL--LDQDHGYVRSLGLRI 171 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G AY TDV A AE L++L+ +D ++ + H++H ++ + I + +LT Sbjct: 172 GRFAYSTDVVAMDAEVLDRLKGIDTWVVGCFQRQKHATHAHIALVAQWAARIGVRRTVLT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 HM DLD+ + + P + P FDGM+ Sbjct: 232 HMGYDLDWAWMQANLPPGLEPGFDGMEI 259 >gi|297538542|ref|YP_003674311.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297257889|gb|ADI29734.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 254 Score = 284 bits (728), Expect = 7e-75, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 140/262 (53%), Gaps = 11/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G P I AC T+P+N RTR S I + ++++DTGPD Sbjct: 1 MQLTMLGVGSSAGTPMIGCKCPACASTDPRNNRTRCSSIIHLK----NGKSILIDTGPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LRE++ SIDAVLYTH HADH+HGID LR + Q+ I +Y + D M+H+ + F Y Sbjct: 57 RQQSLREKLTSIDAVLYTHTHADHLHGIDDLRAFCQIQRTQIPLYGSHDAMQHIADKFGY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + + P++ +I P + IPI +HG G+R G++AY Sbjct: 117 TLREPSNFWDLPVLKTHIISA---PFQLFEQ----TVIPIPLKHGNSDIYGYRVGDIAYL 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV++ P SL LQ L L++D L+ H +H +L +SL LI + L HM +L Sbjct: 170 TDVSSIPEASLALLQGLKVLLLDCLRYTTHYTHINLEQSLHYASLIQADSTYLIHMTHEL 229 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 ++ + + P V +DG++ Sbjct: 230 EFAALSEQLPKNVFVGYDGLKV 251 >gi|148553412|ref|YP_001260994.1| beta-lactamase domain-containing protein [Sphingomonas wittichii RW1] gi|148498602|gb|ABQ66856.1| beta-lactamase domain protein [Sphingomonas wittichii RW1] Length = 254 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 142/266 (53%), Gaps = 18/266 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG S GVPRI DWG CDP P+NRR+R+S+ + + T ++VDT PD Sbjct: 1 MKLRVLGCGTSSGVPRIGNDWGDCDPAEPRNRRSRASILVESAT-----TRLLVDTTPDM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V++IDA+L+TH HADH HGID +R + ++ P+ YA + M+ L F Y Sbjct: 56 RQQLLDADVIAIDAILWTHDHADHCHGIDDVRQIYHARRAPVPGYAYAEAMQQLRRRFDY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F D YPP V P V+E G I + Q HG I S G RF + Sbjct: 116 VFTGRDG--YPPTVEPGVLEP-------DMTIGDIRIRCVAQPHGSIFSAGLRFDHDGKS 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + F E + +D ++DAL+ H +H L+ +L I P A+LTHM Sbjct: 167 IGYSTDFHVFTDEMIGLFSGVDIWVVDALRARPHPTHAHLAMTLDAIRTCAPGRALLTHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 +DY + +S P V PA+DG++ Sbjct: 227 DQSMDYARLGESLPDGVEPAYDGLEV 252 >gi|254456108|ref|ZP_05069537.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083110|gb|EDZ60536.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter sp. HTCC7211] Length = 258 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 8/265 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F ILGCG+S+GVPR G +G CDP KN RTR S I E V++DT PD Sbjct: 1 MKFIILGCGSSMGVPRPDGFFGNCDPNEKKNYRTRCSALIKTEKE-----NVLIDTSPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR ++ I+ V Y+H HAD HGI+ LR ++L K+PI+V+A ++L ++F + Sbjct: 56 RQQLLRHKIKKINKVFYSHMHADQTHGINDLRSFYLSNKKPIEVFADKSTSQYLKDNFSF 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAY 183 CFK+ + YP + I N + + S+ IE PI HG ++S+ + +AY Sbjct: 116 CFKSY-SKEYPATLKLNKI-NTKNNLFVNSSIKKIEVKPISVIHGNVNSICYIINRELAY 173 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +DV+ + L+ +NL +LI+D L H SH +L +SL I + PK AILT++ Sbjct: 174 ISDVSEILKKDLKYFKNLKYLIVDCLWYNFHPSHLNLEKSLNLINYLKPKKAILTNLSPV 233 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 LDY ++ K P V+PA DG+ + Sbjct: 234 LDYKVLKKLVPKNVIPAHDGLTLNL 258 >gi|282859632|ref|ZP_06268734.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] gi|282587550|gb|EFB92753.1| metallo-beta-lactamase domain protein [Prevotella bivia JCVIHMP010] Length = 257 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 124/265 (46%), Gaps = 15/265 (5%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK+ T LG G S GVP I C T+P ++R RSS I NT +++D Sbjct: 1 MKNNIKVTFLGTGTSNGVPFIGCKCEVCTSTDPHDKRLRSSALIET-----ENTRLLIDC 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF Q+L + ID VL TH H DH+ GID LR + IDVYA + L Sbjct: 56 GPDFRQQILPQPFRKIDGVLLTHIHYDHVGGIDDLRAFC--ALGDIDVYANKHTCEGLHH 113 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + YCF P +N +E + K G E P HG++ LG+R G+ Sbjct: 114 NIPYCF-TDHLYPGVPKLNLHSVEPHQ-----KLHIGDFEVEPFEVIHGKLPILGYRIGS 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTH 239 +AY TD+ + + L L+ + LII+ L+ + H SH + E++ + I + L H Sbjct: 168 LAYITDMKSIEDKELLSLKGIKTLIINGLRWDRPHHSHQLIPEAITFSKQIKAEQTYLIH 227 Query: 240 MHVDLD-YDMVLKSTPSRVVPAFDG 263 M + K P V A+DG Sbjct: 228 MTDRAGLHAESQKRLPENVHFAYDG 252 >gi|288925809|ref|ZP_06419740.1| lipoate-protein ligase B [Prevotella buccae D17] gi|288337464|gb|EFC75819.1| lipoate-protein ligase B [Prevotella buccae D17] Length = 257 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 15/268 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP + C NPK+ R R++ + T V++D GPD Sbjct: 1 MKVTLLGTGTSGGVPALGCQCEVCRSANPKDHRLRAAALVET-----ERTRVLIDAGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L + ID VL TH H DH+ G+D LR Y +DVY + L Y Sbjct: 56 RMQLLGQSFKKIDGVLLTHVHYDHVAGLDDLRPYCYA-FNGVDVYCDEKVNRGLHYMMPY 114 Query: 125 CFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 CF + YP P+++ IE + G ++ +PIL HG++ G+RFG A Sbjct: 115 CFPSDPMMLYPGAPVLSLHTIEAHS-----TLKIGELDIMPILVMHGKMPIFGYRFGKFA 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD+ E L+ +++L+I+AL+ H SH + +++K I K+ TH+ Sbjct: 170 YITDMKTMADEEYSYLEGVEYLVINALRWEKPHHSHQLVDDAIKVARKIGVKHTWFTHLT 229 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ + P+ +D + Sbjct: 230 HYIGFHEDANRRLPAGFEFGYDNQVLTF 257 >gi|307292795|ref|ZP_07572641.1| PhnP protein [Sphingobium chlorophenolicum L-1] gi|306880861|gb|EFN12077.1| PhnP protein [Sphingobium chlorophenolicum L-1] Length = 259 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 96/269 (35%), Positives = 140/269 (52%), Gaps = 18/269 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G S GVPRI DWGACDP PKNRRTR+S+ + + T +++DT PD Sbjct: 2 SLKLTILGSGTSSGVPRIGNDWGACDPQEPKNRRTRASILVESPT-----TRLLIDTSPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V+ IDA+L+TH HADH HG+D +R + + P+ YA P +K L E F Sbjct: 57 MRAQLLAADVVQIDAILWTHDHADHSHGLDDVRQLYHHRGTPVPGYARPQTLKLLRERFG 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y F+ Y ++ + + G I Q HG I S GFRF Sbjct: 117 YAFEG--RHGYHATIDAHALPDG-------LRIGDIGIACTDQPHGEIYSTGFRFTYDGH 167 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ Y TD + + L +LD ++DAL+ H +H L+ +L ++ + P+ AIL H Sbjct: 168 SIGYATDFHDITPDMLALYDDLDIWVVDALREKPHPTHAHLALTLDAVQAVRPRRAILIH 227 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 M +DY + ++ P+ V P +DG+ Sbjct: 228 MDQSMDYATLCRTLPAGVEPGYDGLVAEL 256 >gi|212550576|ref|YP_002308893.1| hypothetical protein CFPG_219 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548814|dbj|BAG83482.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 260 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 133/269 (49%), Gaps = 14/269 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G P + + C + K++R RSS+ + + +++D GPDF Sbjct: 1 MKIRFLGTGTSTGNPEVGCNCVVCLSEDKKDKRFRSSVLVEI-----ESRYILIDCGPDF 55 Query: 65 YMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Y Q+L ++ +D VL TH H DH+ G+D LR + ++ +++Y L E Sbjct: 56 YRQILETFKKKTFDRLDGVLITHEHYDHVGGLDDLRCFTRNRRI-VNIYTDYYTSIKLKE 114 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Y F +++ YP I N + +G I+ IPI HGR LG+R Sbjct: 115 RLPYIFNY-NEQQYPGIPNLRIHSIKKNESFFDISG--IKIIPINLLHGRKPILGYRIDK 171 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY TD+ P EKL+ L L+I+AL+ H++H ++ E+LK I++I P A LTH+ Sbjct: 172 FAYLTDLKTIPDSEFEKLKGLSVLVINALREKSHATHANIKEALKYIDIIKPDQAYLTHI 231 Query: 241 HVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 D ++ V K P + A+D ++ S Sbjct: 232 CHDFGLHEDVQKKLPPAIRIAYDELEISI 260 >gi|260912128|ref|ZP_05918684.1| lipoate-protein ligase B [Prevotella sp. oral taxon 472 str. F0295] gi|260633734|gb|EEX51868.1| lipoate-protein ligase B [Prevotella sp. oral taxon 472 str. F0295] Length = 253 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT+LG G S GVP + C NPK++R R +L + V+VD GPD Sbjct: 1 MKFTLLGTGTSNGVPVLGCGCEVCRSDNPKDKRMRCALLVE-----SDEHRVLVDCGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ++ IDAVL TH H DH+ G+D LR Y I +Y D ++ L + Y Sbjct: 56 RMQLMPLAFRPIDAVLLTHIHYDHVGGVDDLRPYC--SFGDIHLYGNIDTVRGLKHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + D P++ IE + G I +P+ HG++ + +RFG +AY Sbjct: 114 CF-SDDPYPGVPLLKLHAIEPHH-----PLTFGDIHVMPLEVLHGQMPIMAYRFGKLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ A E L+ LQ ++ L+I+AL+ H SH +SE++ + + ILTH+ Sbjct: 168 TDMKAIRDEELQYLQEVEVLVINALRFEKEHHSHQLVSEAIAFSRRLGVRRTILTHLTHQ 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + +++ K P V +DGMQ Sbjct: 228 VGLHEVANKKLPRGVEFGYDGMQVEL 253 >gi|304382894|ref|ZP_07365376.1| lipoate-protein ligase B [Prevotella marshii DSM 16973] gi|304335919|gb|EFM02167.1| lipoate-protein ligase B [Prevotella marshii DSM 16973] Length = 254 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 15/264 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP I + C T+P ++R R+S + T +++D GPDF Sbjct: 1 MKLTLLGTGTSGGVPSIGCNCPVCRSTDPHDKRLRTSALLET-----DTTRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L IDAVL TH H DH+ GID LR + I +Y L + Y Sbjct: 56 RQQILPHPFRKIDAVLLTHIHYDHVAGIDDLRPFC--TFGDIQLYGDEATTGGLRHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF P+++ I + G I+ +P QHG + L +RF +AY Sbjct: 114 CFGTH-LYPGVPLLSLHAIVPHR-----PLRIGDIDILPFRVQHGAMPILAYRFDKLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ E LQ ++ LII+AL+ H SH + ++++ I K H+ Sbjct: 168 TDMKTMDEEEYAYLQGVETLIINALRFTPVHHSHQLVDDAIRVARRIGAKRTYFVHVTHQ 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQF 266 + +D P A+DG Sbjct: 228 IGFHDEANARLPHGFSFAYDGQVI 251 >gi|118594883|ref|ZP_01552230.1| probable hydrolase protein [Methylophilales bacterium HTCC2181] gi|118440661|gb|EAV47288.1| probable hydrolase protein [Methylophilales bacterium HTCC2181] Length = 256 Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats. Identities = 94/264 (35%), Positives = 134/264 (50%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG G+S G P + D C TNPKN RTR S I +++DTGPD Sbjct: 3 FKLTILGSGSSAGTPVVGCDCSTCLSTNPKNNRTRCSSIIHL----NDGRNILIDTGPDL 58 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ LRE + +DAVL+TH HADH HGID LR + K I +Y + M L + F Y Sbjct: 59 RMQSLRESLTRVDAVLFTHHHADHCHGIDDLRAFCQINKIQIPLYGSEYVMGQLSQKFGY 118 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 P++ P + D P + PI HG+ G+R GN+AY Sbjct: 119 AMVDPKGFWEIPVLKPHSV---DRPFELFGQ----TITPIPLYHGKSLINGYRIGNMAYL 171 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TDV++ P S++ L L+ L++D L+ H +HFS ES+ IN + L HM ++ Sbjct: 172 TDVSSIPDNSMQLLDGLEVLLLDCLRFRPHHTHFSYDESIAAAAKINAASTYLIHMTHEM 231 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 +Y+ + K P + +DG++ S Sbjct: 232 EYEELQKKLPEGIYAGYDGLKLSI 255 >gi|296284130|ref|ZP_06862128.1| metal-dependent hydrolase [Citromicrobium bathyomarinum JL354] Length = 255 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 17/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVPRI GDWGACDP+ P+NRRTR S+ + + ++VDT PD Sbjct: 1 MKVTLLGSGTSTGVPRINGDWGACDPSEPRNRRTRVSIVVE----NDAGARLLVDTPPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q LR ++ ++D V +TH HADH HGID LR + PI Y + ++ L F Y Sbjct: 57 RDQFLRNKITNVDGVFWTHDHADHCHGIDDLRALRYGRSGPIPGYGVEETVRRLKARFSY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F + YP IV V++ + AG + + HG S G+RFG + Sbjct: 117 VFAG--EHGYPTIVKLEVLDRLRL-----FAGFTVNW--CVMPHGPAKSTGYRFGCDDKS 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + +E + + +D L+ D L+ H +H +L+ +L+ + +LTH+ Sbjct: 168 IGYATDFSEITSEMVTLFKGVDLLVCDCLRREEHPTHANLAMALELGKRCKVGKIVLTHL 227 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + P+ V +DGM ++ Sbjct: 228 DKSMDYKTLSGEVPAGVQVGYDGMVVAA 255 >gi|288928228|ref|ZP_06422075.1| lipoate-protein ligase B [Prevotella sp. oral taxon 317 str. F0108] gi|288331062|gb|EFC69646.1| lipoate-protein ligase B [Prevotella sp. oral taxon 317 str. F0108] Length = 253 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 15/266 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT+LG G S GVP + C N K++R R +L + R V+VD GPD Sbjct: 1 MKFTLLGTGTSNGVPVLGCGCEVCRSDNSKDKRMRCALLVESKEHR-----VLVDCGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ++ + IDAVL TH H DH+ G+D LR Y I +Y D +K L + Y Sbjct: 56 RMQLMPQVFRPIDAVLLTHIHYDHVGGVDDLRPYC--SFGDIHLYGNVDTVKGLKHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + D P++ IE + G I +P + HG++ L +RFG +AY Sbjct: 114 CF-SDDLYPGVPLLKLHAIEPHQ-----PLMFGDINVMPFVVLHGQMPILAYRFGQLAYI 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ + L+ L++++ LII+AL+ H SH +SE++ + + ILTH+ Sbjct: 168 TDMKTIGNDELQYLKDVEVLIINALRFEKEHHSHQLVSEAIDFSRQLGARRTILTHLTHQ 227 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ K P V +DGMQ Sbjct: 228 IGLHEKASKRLPIGVEFGYDGMQVEL 253 >gi|315608237|ref|ZP_07883227.1| lipoate-protein ligase B [Prevotella buccae ATCC 33574] gi|315250018|gb|EFU30017.1| lipoate-protein ligase B [Prevotella buccae ATCC 33574] Length = 257 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 15/268 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G S GVP + C NPK+ R R++ + T V++D GPD Sbjct: 1 MKVTLLGTGTSGGVPALGCQCEVCRSANPKDHRLRAAALVET-----ERTRVLIDAGPDI 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L + ID VL TH H DH+ G+D LR Y +DVY + L Y Sbjct: 56 RMQLLGQSFKKIDGVLLTHVHYDHVAGLDDLRPYCYA-FNGVDVYCDEKVNRGLHYMMPY 114 Query: 125 CFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 CF + YP P+++ IE + G ++ +PIL HG++ G+RFG A Sbjct: 115 CFPSDPMMLYPGAPVLSLHTIEAHS-----TLKIGELDIMPILVMHGKMPIFGYRFGKFA 169 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMH 241 Y TD+ E + +++L+I+AL+ H SH + +++K I K+ TH+ Sbjct: 170 YITDMKTMADEEYSYFEGVEYLVINALRWEKPHHSHQLVDDAIKVARKIGVKHTWFTHLT 229 Query: 242 VDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ + P+ +D + Sbjct: 230 HYIGFHEDANRRLPAGFEFGYDNQVLTF 257 >gi|288802875|ref|ZP_06408312.1| lipoate-protein ligase B [Prevotella melaninogenica D18] gi|288334692|gb|EFC73130.1| lipoate-protein ligase B [Prevotella melaninogenica D18] Length = 276 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 15/256 (5%) Query: 15 SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 S GVP + C +P++ R R+S + T +++D+GPDF Q+L + Sbjct: 34 SNGVPVLGCSCDVCKSKDPRDNRLRTSALLETA-----KTRIVIDSGPDFRQQMLPQPFR 88 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ID +L TH H DH+ GID +R Y I+VYA + L +F YCF + Sbjct: 89 KIDGLLITHIHYDHVGGIDDVRPYC--ALGNIEVYANENTCDGLRHNFPYCF-TDNPYPG 145 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P +N I+ + +K G IE +PI HG + LG+RFG +AY TD+ E Sbjct: 146 VPKLNLHSIQPH-----VKFMIGDIEVMPISVMHGGLPILGYRFGKLAYITDMKTIKDEE 200 Query: 195 LEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKS 252 L L+ ++ L+++AL+ H SH +SE++ I K LTH+ + ++ K Sbjct: 201 LPYLEGVETLVVNALRWEREHHSHQLISEAIDFSRKIGAKRTYLTHLTHKIGLHEEAQKL 260 Query: 253 TPSRVVPAFDGMQFSS 268 P+ + A+DG++ Sbjct: 261 LPNDIFFAYDGLKIHV 276 >gi|187918394|ref|YP_001883957.1| metal-dependent hydrolase [Borrelia hermsii DAH] gi|119861242|gb|AAX17037.1| metal-dependent hydrolase [Borrelia hermsii DAH] Length = 252 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 12/261 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 LG GAS GVP + C KN+R RS+ +S +++DTGPD Q Sbjct: 4 IFLGTGASSGVPMLNCSCRVCSLNFGKNKRLRSAFFLSLYG-----MNLLIDTGPDIRAQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE ++ +D VLYTH H DHI G+D ++ F + P+ +YA M+H+ +F + F Sbjct: 59 LLRENIVKLDLVLYTHEHYDHIMGLDDIK--FYTRTAPLPIYARESTMQHIKNAFPHNFS 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + +I V + G I+ +PI HG I SLG+R N+AY TDV Sbjct: 117 SKVSISGKA----NIIPGLAVDLQQIFFRG-IKIMPIPLLHGDIISLGYRIDNLAYLTDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ ++ Sbjct: 172 KSIPEISYNYLKGLDVLVIDALRIKPHPGHLNFDDAINEVKKINPKIAYFTHISHDILHE 231 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + A+DG+Q Sbjct: 232 EFDYLKRDDIYLAYDGLQIHV 252 >gi|67459763|ref|YP_247387.1| beta-lactamase superfamily hydrolase [Rickettsia felis URRWXCal2] gi|67005296|gb|AAY62222.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia felis URRWXCal2] Length = 254 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/264 (33%), Positives = 131/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGASLGVP I D C + N+RTRS++ I + N+ ++VD G D Sbjct: 2 LQVTILGCGASLGVPVIGCDCSICLSNSKYNKRTRSAIYI-----KDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFDNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDVIDFPPESEKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|31747674|gb|AAO38319.1| Lfe137p1 [Leptospirillum ferrooxidans] Length = 243 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 13/241 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG GAS GVP I C T+ KNRRTRSS+ + +++DT PD Q Sbjct: 15 FLGTGASSGVPVIGCSCPVCISTDKKNRRTRSSVLVRCAG-----KNLLIDTSPDLRYQS 69 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+ V++ID V++THPHADH+ G+D LR + QKR I VYA + + F Y F Sbjct: 70 LKNGVVTIDGVIFTHPHADHVLGLDELRIFNYIQKREIPVYADSYTLSRVQMMFPYAFSE 129 Query: 129 LDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P + P I + + I HG + + R ++ Y TD Sbjct: 130 ANRGGLSRPKLIPHEITG-------PADILGMSVISFPVYHGPVMNHAVRINDLVYLTDC 182 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 P ES E L ++ LI+ A+K H SHF + E+L IE +NPK A +TH+ L+++ Sbjct: 183 KGIPDESWEALYGVETLIVGAVKYEPHESHFGIHEALALIERLNPKRAFITHLSHSLEHE 242 Query: 248 M 248 Sbjct: 243 E 243 >gi|71083694|ref|YP_266414.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062807|gb|AAZ21810.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 259 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 107/266 (40%), Positives = 157/266 (59%), Gaps = 11/266 (4%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 F ILG G+S+GVPR G G CD N KN RTR S I ++ +++DT PD Sbjct: 2 SLKFVILGSGSSMGVPRADGYSGDCDLKNKKNFRTRCSALIKF-----NDQNILIDTSPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L+ ++ SI V YTH HAD HGI+ LR +FL K+ I VYA + K+L +F+ Sbjct: 57 LRSQLLKNKIKSISKVFYTHLHADQTHGINDLRPFFLINKKQIPVYADINTKKYLLSTFK 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 YCFK+ YP +N ++ +K IE+IP+ QHG+I S+ + N +A Sbjct: 117 YCFKS--SFGYPSTLNINSLKKKHE-FIIKDKKIKIESIPV--QHGKIKSICYLINNKLA 171 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y +D++ F + +KL+NL++LIID L HS+HF+L + L+ ++++ PK ILT+MH Sbjct: 172 YASDISLFFKKDYKKLKNLEYLIIDCLWYRNHSAHFNLDQVLEIVKILTPKKTILTNMHS 231 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 DLDY + K P ++P FDG+ S Sbjct: 232 DLDYAKLKKKLPKNIIPGFDGLTVSL 257 >gi|56551990|ref|YP_162829.1| beta-lactamase domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|260752467|ref|YP_003225360.1| beta-lactamase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543564|gb|AAV89718.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258551830|gb|ACV74776.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 254 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 130/268 (48%), Gaps = 18/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP I +WG CDP PKN RTR+SL + T ++VDT PD Sbjct: 1 MKLRLLGSGTSSGVPIIGNNWGTCDPNEPKNNRTRASLYLET-----DQTKILVDTSPDM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DAVL+TH HADH HGID LR F ++ PI +A P+ + L + F Y Sbjct: 56 RTQLLRADISILDAVLWTHDHADHCHGIDDLRPIFHRRGEPIPGFARPETLSGLKQRFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F D Y P V V+ +N G +E Q H RI+S GF F Sbjct: 116 VFDGYGD--YRPTVEANVLPDN-------LTIGDVEISVTDQPHARITSAGFCFRHKNIR 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 V Y TD N E + Q +D I+D L+ H SH L+ L+ E + K A+ HM Sbjct: 167 VGYATDFNNITDEMAKLYQGVDLWIVDTLRERPHPSHPHLAMILEWAEKLQVKRAVTCHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + + P + +DG Sbjct: 227 DNSMDYATLSQKLPHYMEVGYDGWTTEI 254 >gi|94496393|ref|ZP_01302970.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] gi|94424139|gb|EAT09163.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] Length = 263 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 97/265 (36%), Positives = 135/265 (50%), Gaps = 18/265 (6%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G S GVPRI DWG CDP+ PKNRRTR S+ + + T ++VDT PD Sbjct: 2 SLKLTMLGSGTSSGVPRIGNDWGICDPSEPKNRRTRVSILVESAT-----TRILVDTSPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V IDA+L+TH HADH HG+D +R + + P+ YA +K L + F Sbjct: 57 MRAQLLSADVAHIDAILWTHDHADHCHGLDDVRQLYHHRGTPVPGYARAQTLKLLKQRFA 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 Y F+ Y P + P+ G I+ + Q HG I S GFRF Sbjct: 117 YAFEGRQG--YHPTIAA-------CPLHDSLQIGDIDISCVDQPHGAIYSTGFRFSHDGK 167 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ Y TD + E L +D ++DAL+ H +H L+ +L+ I P AILTH Sbjct: 168 SIGYATDFHVITPEMLALYDQVDIWVVDALREKPHPTHPHLAMTLEGIAAARPGRAILTH 227 Query: 240 MHVDLDYDMVLKSTPSRVVPAFDGM 264 M +DY + + P V P +DG+ Sbjct: 228 MDQSMDYATLCHTLPRGVEPGYDGL 252 >gi|241761927|ref|ZP_04760012.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373607|gb|EER63179.1| beta-lactamase domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 254 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 97/268 (36%), Positives = 130/268 (48%), Gaps = 18/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP I +WG CDP PKN RTR+SL + T ++VDT PD Sbjct: 1 MKLRLLGSGTSSGVPIIGNNWGTCDPNEPKNNRTRASLYLET-----DQTKILVDTSPDM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DAVL+TH HADH HGID LR F ++ PI +A P+ + L + F Y Sbjct: 56 RTQLLRADISILDAVLWTHDHADHCHGIDDLRPIFHRRGEPIPGFARPETLSGLKQRFSY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F D Y P V V+ +N G +E Q H RI+S GF F Sbjct: 116 VFDGYGD--YRPTVEANVLPDN-------LTIGDVEISVTDQPHARITSAGFCFRHKNIR 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 V Y TD N E + Q +D I+D L+ H SH L+ L+ E + K A+ HM Sbjct: 167 VGYATDFNNITDEMAKLYQGVDLWIVDTLRERPHPSHPHLAMILEWAEKLQVKKAVTCHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + + P + +DG Sbjct: 227 DNSMDYATLSQKLPHYMEVGYDGWTTEI 254 >gi|91763266|ref|ZP_01265230.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717679|gb|EAS84330.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 259 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 107/266 (40%), Positives = 157/266 (59%), Gaps = 11/266 (4%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 F ILG G+S+GVPR G G CD N KN RTR S I ++ +++DT PD Sbjct: 2 SLKFIILGSGSSMGVPRADGYSGDCDLKNKKNFRTRCSALIKF-----NDQNILIDTSPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L+ ++ SI V YTH HAD HGI+ LR +FL K+ I VYA + K+L +F+ Sbjct: 57 LRSQLLKNKIKSISKVFYTHLHADQTHGINDLRPFFLINKKQIPVYADSNTKKYLLSTFK 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 YCFK+ YP +N ++ +K IE+IP+ QHG+I S+ + N +A Sbjct: 117 YCFKS--SFGYPSTLNIYSLKKKHE-FIIKDKKIKIESIPV--QHGKIKSICYLINNKLA 171 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y +D++ F + +KL+NL++LIID L HS+HF+L + L+ ++++ PK ILT+MH Sbjct: 172 YASDISLFFKKDYKKLKNLEYLIIDCLWCRNHSAHFNLDQVLEIVKILTPKKTILTNMHS 231 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 DLDY + K P ++P FDG+ S Sbjct: 232 DLDYAKLKKKLPKNIIPGFDGLTVSL 257 >gi|298386576|ref|ZP_06996132.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] gi|298260953|gb|EFI03821.1| hydrolase, metal-dependent [Bacteroides sp. 1_1_14] Length = 247 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 14/243 (5%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHP 84 C +PK+ R R+S + + +++D GPDF QVL ID VL TH Sbjct: 16 CPVCTSADPKDNRLRASAIVET-----EDARILIDCGPDFRAQVLHLPFEKIDGVLITHE 70 Query: 85 HADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 H DH+ G+D LR + + +YA + L YCF D YP + + I Sbjct: 71 HYDHVGGLDDLRPFCRF--GAVPIYAEEYVARALRLRMPYCFV---DHRYPGVPD---IP 122 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 ++ + + E +P+ HGR+ LG+R G + Y TD+ P ES E+L+ +D L Sbjct: 123 LQEIEVGHAFSIHHTEVVPLRVMHGRLPILGYRIGRLGYITDMLTMPEESYEQLEGIDVL 182 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDG 263 I++AL+ H +H +L E+LK E I K HM D+ + V K P + +DG Sbjct: 183 IMNALRIAPHPTHQNLEEALKVAERIRAKETYFIHMSHDMGLHKKVEKELPENIHLTYDG 242 Query: 264 MQF 266 M+ Sbjct: 243 MEI 245 >gi|294083930|ref|YP_003550687.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663502|gb|ADE38603.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 259 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 99/266 (37%), Positives = 143/266 (53%), Gaps = 10/266 (3%) Query: 5 YHFTILGCGASLGVPRITG-DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGCG S+GVP + WGACDPT+P+NRR R ++ I + +TT++VD GPD Sbjct: 1 MKVTMLGCGTSVGVPALGNAGWGACDPTDPRNRRQRCAMLIQK-----DDTTILVDAGPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L + IDAVL TH H+DH+ G+D LR ++ + I +YA + F Sbjct: 56 IRNQLLPHMLKKIDAVLITHTHSDHVAGLDDLRAFYWPDRNIIPLYATASSRTDIVNRFP 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVA 182 Y F P ++ ++ G I + Q+HG ISSLGF F G Sbjct: 116 YLFTKNPKS---PSYFVPPMDVTEIKAGQTLNFGSINIDVLHQEHGNISSLGFVFNGKFG 172 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 Y TDV P ES KL++LD I++AL+ HSSH + IE + PK+A+LTH+ + Sbjct: 173 YSTDVIDMPEESFAKLRDLDLWIVEALRPEPHSSHSHYENTFAWIEAMKPKHAVLTHLGL 232 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 + DY + + P+ V P DG+ F+ Sbjct: 233 EADYAELAELCPAHVEPGVDGLSFTL 258 >gi|209542219|ref|YP_002274448.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209529896|gb|ACI49833.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 262 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 99/270 (36%), Positives = 137/270 (50%), Gaps = 15/270 (5%) Query: 5 YHFTILGCGASLGVPRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +LGCG S GVP I G DWG CDP P+NRRTR+S+ + RG + V++D Sbjct: 1 MELIVLGCGGSAGVPMIGGPDGAGDWGVCDPAEPRNRRTRASVLL-----RGGDGAVLLD 55 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L +++ DA+LYTH HADHI G+D +R RP+ VY P + L Sbjct: 56 TGPDLRDQLLAQRIDRFDAILYTHAHADHIAGLDEVRAINRVIDRPLPVYGTPPVLTDLE 115 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F+ PP V+ + V + Q HGR SLG R G Sbjct: 116 NRFNYAFRPWS----PPGFYRPVVVPHVVHAGQTLEVAGLHLRLFEQIHGRTLSLGVRCG 171 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILT 238 +AY TDV P E+ L ++ ++D ++ HS+H L L+ I P+ ILT Sbjct: 172 TIAYSTDVVELPDEAFAALAGIETWVVDCFQRSAAHSAHAWLDRVLEWRARIAPRRVILT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 HM D+D+ + + P V AFDGM+ + Sbjct: 232 HMGPDMDWAWMRANLPDGVEAAFDGMRVAF 261 >gi|229587238|ref|YP_002845739.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia africae ESF-5] gi|228022288|gb|ACP53996.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia africae ESF-5] Length = 254 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTNHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+ FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDLIDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|238651114|ref|YP_002916972.1| beta-lactamase superfamily hydrolase [Rickettsia peacockii str. Rustic] gi|238625212|gb|ACR47918.1| beta-lactamase superfamily hydrolase [Rickettsia peacockii str. Rustic] Length = 254 Score = 277 bits (710), Expect = 9e-73, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+ FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDLIDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|149184559|ref|ZP_01862877.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] gi|148831879|gb|EDL50312.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] Length = 255 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 17/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVPR+ DWG CDP PKNRRTR S+ + + ++VDT D Sbjct: 1 MKLLMLGSGTSAGVPRVGNDWGQCDPNEPKNRRTRVSIIVE----NDAGQRILVDTATDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + +DAV +TH HADH HGID LR + P+ +A + L F Y Sbjct: 57 RAQLLANNIDKVDAVFWTHDHADHCHGIDDLRVMRYDRSNPLPGFAGRVACERLRRRFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F+ P ++ + AG + + HG + S GFRF + Sbjct: 117 IFEGQFGY-------PTIVYLKETSQAQMVAGFTFDD--VEMPHGPVKSTGFRFEADGKS 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 V Y TD + ++ + D L++D L+ H +H L +L + K +LTH+ Sbjct: 168 VVYATDFSEITPAMVKCFRGCDLLVVDCLRERPHPTHAHLEMALDLARCVKAKRTVLTHL 227 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + P V+ +DG++ + Sbjct: 228 DKSMDYATISAKVPKGVLVGYDGLEVAV 255 >gi|15893265|ref|NP_360979.1| PhnP protein [Rickettsia conorii str. Malish 7] gi|15620485|gb|AAL03880.1| PhnP protein [Rickettsia conorii str. Malish 7] Length = 254 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 +D+ FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 SDLIDFPPESDKFLKDIKIWILDCMDYKSNPNHTGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|157965018|ref|YP_001499842.1| beta-lactamase superfamily hydrolase [Rickettsia massiliae MTU5] gi|157844794|gb|ABV85295.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia massiliae MTU5] Length = 256 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 4 LQVTILGCGASIGVPVIRCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 58 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 59 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 118 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 119 LFNNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 172 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 173 PDVIDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 232 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 233 DYHEITKMLPNNVKPLYDGYKFTV 256 >gi|157804260|ref|YP_001492809.1| hypothetical protein A1E_05565 [Rickettsia canadensis str. McKiel] gi|157785523|gb|ABV74024.1| hypothetical protein A1E_05565 [Rickettsia canadensis str. McKiel] Length = 254 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 137/264 (51%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGYDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++RE++ +D + TH H+DH++GI+ LR + K+P+++Y + + L + F Y Sbjct: 57 KYQLVREKISKLDCAILTHDHSDHVNGIEDLRVFSFTSKKPLEIYTNYNTVAKLHKKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 FK ++ V++ + K IE Q HG I SLG R G+ Y Sbjct: 117 LFKP------ASVMPWQVLDTKPIDFFDKIKISTIEIQFFRQHHGSIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDVIDFPLESEKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEEILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K PS V P +DG +F+ Sbjct: 231 DYHEITKMLPSDVKPLYDGYKFTV 254 >gi|281423122|ref|ZP_06254035.1| lipoate-protein ligase B [Prevotella oris F0302] gi|281402458|gb|EFB33289.1| lipoate-protein ligase B [Prevotella oris F0302] Length = 255 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 13/266 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP + + C ++P++ R R+S I +T +++D GPDF Sbjct: 1 MKVVLLGTGTSQGVPVLGCNCEVCKSSDPRDHRFRTSALIET-----ESTRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + IDAVL TH H DH+ GID LR + + ID+Y D + L + Y Sbjct: 56 REQMLLQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--KFGDIDIYTDSDVIHGLKHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + YP + I+ E + + G I+ +PI H + LGFR G +AY Sbjct: 114 CFPT-NGDLYPGVPRLILHEIRP---HERFSVGDIDIVPITVMHDTLPVLGFRMGKLAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ L L ++ L+++ L+ H SH + +++ +++ K L HM + Sbjct: 170 TDMKRIEETELSYLAGIEVLVVNGLRWKREHHSHQLIDDAIAFSKVLGVKRVYLIHMTHE 229 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ + P V +DG + Sbjct: 230 IGLHNEAGRLLPHGVEFGYDGETITV 255 >gi|239948133|ref|ZP_04699886.1| PhnP protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239922409|gb|EER22433.1| PhnP protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 254 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I + N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSICTSPSKYNKRTRSAIYI-----KDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQDKPFEIYTDHDSAAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKFG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 +DV F ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 SDVIDFLPESEKFLKDIKIWILDCMDYKSNPNHVGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|91206134|ref|YP_538489.1| beta-lactamase superfamily hydrolase [Rickettsia bellii RML369-C] gi|157826434|ref|YP_001495498.1| beta-lactamase superfamily hydrolase [Rickettsia bellii OSU 85-389] gi|91069678|gb|ABE05400.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia bellii RML369-C] gi|157801738|gb|ABV78461.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia bellii OSU 85-389] Length = 254 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 11/262 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCGCSICLSDSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q++RE+V +D + TH H+DH++GID LR + +K+ +++Y + +L +SF Y Sbjct: 57 KHQLIREKVNKLDCAVLTHYHSDHVNGIDDLRIFSFMEKKALEIYTDENTAVNLHKSFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F Y + V+E ++ K IE Q HG I SLG R G+ Y Sbjct: 117 LF------GYNSFMQGPVLETKNIGFFDKIKINTIEIQFFRQNHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + LQN+ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDVINFPPESEKFLQNIKIWILDCMDYTSNKNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY ++K P V P +DG +F Sbjct: 231 DYHEIIKILPDNVKPLYDGYRF 252 >gi|34581068|ref|ZP_00142548.1| PhnP protein [Rickettsia sibirica 246] gi|28262453|gb|EAA25957.1| PhnP protein [Rickettsia sibirica 246] Length = 254 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKLG------RLFTTQSVSFFDKIKVNTIEIQFFRQHHGPIDSLGLRMGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+ FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDLIDFPPESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|270296409|ref|ZP_06202609.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273813|gb|EFA19675.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 241 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 16/251 (6%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-VLSID 77 P I C T+P++ R R+S + + +++D GPDF Q+LR ID Sbjct: 2 PEIGCTCPVCTSTDPRDNRLRASSLLHT-----DDAVILIDCGPDFREQMLRASSFEKID 56 Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 VL TH H DH+ G+D LR + + I +Y+ HL YCF D+ YP + Sbjct: 57 GVLVTHEHYDHVGGLDDLRPF--GRFADIPIYSDAYTAAHLRARMPYCFV---DKVYPGV 111 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVAYCTDVNAFPAESLE 196 + +V E +P+ HGR+ LG+R G + Y TD++ P ES E Sbjct: 112 PRIYL---QEVEAGQAFHINRTEVLPLRVMHGRLPILGYRIGGRLGYITDMHMMPEESYE 168 Query: 197 KLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKSTPS 255 +L+ LD L+++AL+ H +H S+SE+L+ I K HM + + K P Sbjct: 169 QLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHHAGLHADIEKLLPP 228 Query: 256 RVVPAFDGMQF 266 V A+DG++ Sbjct: 229 HVHFAYDGLEI 239 >gi|157829178|ref|YP_001495420.1| PhnP protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933906|ref|YP_001650695.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] gi|157801659|gb|ABV76912.1| PhnP protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908993|gb|ABY73289.1| metal-dependent hydrolase [Rickettsia rickettsii str. Iowa] Length = 254 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTILGCGASIGVPVIGCDCSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y D L F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFEIYTDHDSTAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFNNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D+ FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDLIDFPHESDKFLKDIKIWILDCMDYKSNPNHAGLDKVLEWREKYKPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYKFTV 254 >gi|330994633|ref|ZP_08318556.1| Octanoyltransferase [Gluconacetobacter sp. SXCC-1] gi|329758274|gb|EGG74795.1| Octanoyltransferase [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 96/270 (35%), Positives = 147/270 (54%), Gaps = 15/270 (5%) Query: 5 YHFTILGCGASLGVPRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 ILGC S GVP + G DWG CDP P+NRRTRSS+ I + G ++VD Sbjct: 1 MEMIILGCAGSAGVPMLGGPDGAGDWGECDPGEPRNRRTRSSVII----DDGPGRRLLVD 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L +++ ++DAV+YTH HADHI G+D LR P+ VY + M + Sbjct: 57 TGPDLRDQLLAQRIGTVDAVVYTHAHADHIAGLDELRTINRIIGGPLPVYGTVEVMDEIS 116 Query: 120 ESFRYCFKAL-DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y F+ R + P+++ + +P AG ++ Q+HGR +LG R Sbjct: 117 VRFDYAFRPWTPPRIFRPVLDVH---HVALPSTRTMAGMTVQL--FAQRHGRTETLGLRA 171 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 G +AYCTDV +LE L+ +D +I + +H SH +++ L+ ++I P+ +LT Sbjct: 172 GPMAYCTDVAELDDTALETLRGVDTWVIGCFQREVHPSHGWVAQVLRWRDIIQPRRTVLT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 HM D+D+ + + P V A+DG++ + Sbjct: 232 HMGPDMDWGWMQANLPDGVEAAYDGLRLHA 261 >gi|34499173|ref|NP_903388.1| hydrolase protein [Chromobacterium violaceum ATCC 12472] gi|34105024|gb|AAQ61380.1| probable hydrolase protein [Chromobacterium violaceum ATCC 12472] Length = 250 Score = 274 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 12/261 (4%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 +GCG+S G P I C + +N+RTR+S + RV E G ++DTGPD Q L Sbjct: 1 MGCGSSSGTPAIGCGCPTCQSDDVRNKRTRASAYV-RVGELG----FLIDTGPDLRQQAL 55 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 RE V +DAVLYTHPHADH++GID LR + ++ PI +Y + ++ E F Y + Sbjct: 56 REGVSRLDAVLYTHPHADHLNGIDDLRAFCYLKQGPIALYGNDFTIANIRERFGYALQPP 115 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P++ P V+ P + + PI HG LG+R G+VA+ TD++ Sbjct: 116 SRMWDKPVLLPEVVNG---PFQHQG----VTLTPIPLLHGSWPCLGWRIGDVAWLTDLSR 168 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 P SL L+ L+ L +D L + SH S+ E+ + I + +L HM L+Y + Sbjct: 169 IPDSSLPLLEGLELLFLDCLNEDPYPSHLSVGEAFEWAARIAARRTVLIHMTHKLEYLDL 228 Query: 250 LKSTPSRVVPAFDGMQFSSPI 270 + P V FDG + + Sbjct: 229 SQRCPPGVEVGFDGWRAEVAM 249 >gi|219848901|ref|YP_002463334.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543160|gb|ACL24898.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 257 Score = 274 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 14/267 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S+GVP I + C ++P++ R R+S + R T+++D GPDF Sbjct: 1 MQVRFLGTGTSMGVPVIGCNCPICTSSDPRHHRLRTSALV-----RSHGLTIVIDAGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q L + IDAVL TH H DH+ G+D LR + L+Q + +Y +P + + F Y Sbjct: 56 RLQALAAGLCRIDAVLLTHAHFDHVAGLDDLRPFCLRQGT-VPIYGSPQTLADVRRRFAY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + P + +E G + +PI HG + +R G + Y Sbjct: 115 AFDESSSGSSRPAITLHPVEA-------PFQLGALTIVPIAIPHGTWTITAYRIGPLGYV 167 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 TD +A P +++ L+ + L+++AL+ H +H S++E+ + + L HM + Sbjct: 168 TDASAVPPDAVATLRGVQVLVLNALRVEPHPTHLSIAEAAEVAVAVGAPRTFLVHMTHTV 227 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSSPIP 271 DY P V A+DG++ P Sbjct: 228 DYR-ADYGLPPEVTFAYDGLEVEIESP 253 >gi|162147586|ref|YP_001602047.1| putative beta-lactamase-like [Gluconacetobacter diazotrophicus PAl 5] gi|161786163|emb|CAP55745.1| putative beta-lactamase-like [Gluconacetobacter diazotrophicus PAl 5] Length = 262 Score = 274 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 98/270 (36%), Positives = 136/270 (50%), Gaps = 15/270 (5%) Query: 5 YHFTILGCGASLGVPRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +LGCG S GVP I G DWG CDP P+NRRTR+S+ + RG + V++D Sbjct: 1 MELIVLGCGGSAGVPMIGGPDGAGDWGVCDPAEPRNRRTRASVLL-----RGGDGAVLLD 55 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 TGPD Q+L +++ DA+LYTH HADHI G+D +R RP+ VY P + L Sbjct: 56 TGPDLRDQLLAQRIDRFDAILYTHAHADHIAGLDEVRAINRVIDRPLPVYGTPPVLTDLE 115 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F Y F+ PP V+ + V + Q HGR SLG R G Sbjct: 116 NRFNYAFRPWS----PPGFYRPVVVPHVVHAGQTLEVAGLHLRLFEQIHGRTLSLGVRCG 171 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAILT 238 +AY TDV E+ L ++ ++D ++ HS+H L L+ I P+ ILT Sbjct: 172 TIAYSTDVVELLDEAFAALAGIETWVVDCFQRSAAHSAHAWLDRVLEWRARIAPRRVILT 231 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 HM D+D+ + + P V AFDGM+ + Sbjct: 232 HMGPDMDWAWMRANLPDGVEAAFDGMRVAF 261 >gi|299140620|ref|ZP_07033758.1| lipoate-protein ligase B [Prevotella oris C735] gi|298577586|gb|EFI49454.1| lipoate-protein ligase B [Prevotella oris C735] Length = 255 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 13/266 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP + + C ++P++ R R+S I +T +++D GPDF Sbjct: 1 MKVVLLGTGTSQGVPVLGCNCEVCKSSDPRDHRFRTSALIET-----ESTRILIDCGPDF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L + IDAVL TH H DH+ GID LR + + ID+Y + + L + Y Sbjct: 56 REQMLLQPFRKIDAVLLTHIHYDHVGGIDDLRPFC--KFGDIDIYTDSNVIHGLKHNMPY 113 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 CF + YP + I+ E + + G I+ +PI H + LGF+ G +AY Sbjct: 114 CFPT-NGDLYPGVPRLILHEIRP---HERFSVGDIDIVPITVMHDTLPVLGFKMGKLAYI 169 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ L L ++ L+++ L+ H SH + +++ +++ K L HM + Sbjct: 170 TDMKRIEETELSYLAGIEVLVVNGLRWKREHHSHQLIDDAIAFSKVLGVKRVYLIHMTHE 229 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ + P V +DG + Sbjct: 230 IGLHNEAGRLLPYGVEFGYDGETITV 255 >gi|163795496|ref|ZP_02189462.1| Beta-lactamase-like protein [alpha proteobacterium BAL199] gi|159179095|gb|EDP63628.1| Beta-lactamase-like protein [alpha proteobacterium BAL199] Length = 262 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 103/268 (38%), Positives = 137/268 (51%), Gaps = 13/268 (4%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGCG S+GVP ++G WG CDPT P+NRR R S+ I + ++VD PD Sbjct: 3 RLTMLGCGGSVGVPSLSGGWGLCDPTEPRNRRRRCSILIEKAG-----RRILVDASPDLR 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V SIDAVL+TH HADH HGID LR + + I YA P L F Y Sbjct: 58 EQLLDADVQSIDAVLFTHIHADHTHGIDDLRPLYWSAGQRIPAYADPITFADLQARFGYM 117 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRF-GNVAY 183 F+A+ +P +I + + AG ++ HG SLGF F G +AY Sbjct: 118 FEAVPGSPP--HHSPPLIHHPVDEGRHEVAGITVDVT--RLDHGNSGASLGFVFDGQMAY 173 Query: 184 CTDVNAFPAESLEKLQ--NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 TDV+ L+ L LD I+D L+ S+H +L +L IE + P+ A LTHM+ Sbjct: 174 STDVHTLTEAQLDDLAAFELDTWIVDCLREEPTSAHSTLERTLGWIERVRPRRAYLTHMN 233 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 LDY L P V P +DG+ P Sbjct: 234 ARLDYRRTLAKCPPGVEPGYDGLVLEIP 261 >gi|296535548|ref|ZP_06897730.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] gi|296264134|gb|EFH10577.1| phosphonate metabolism protein PhnP [Roseomonas cervicalis ATCC 49957] Length = 250 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 88/254 (34%), Positives = 126/254 (49%), Gaps = 15/254 (5%) Query: 19 PRITG-----DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV 73 P + G DWGACDP P+N RTRSS+ I G ++VD GPD Q+L ++ Sbjct: 2 PMLGGADAAGDWGACDPAEPRNARTRSSILIE----DGDGRRLLVDAGPDLRRQLLANRI 57 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL-DDR 132 +DA+L TH HADHI G+D R I VYA P+ + L F Y F+ Sbjct: 58 GRVDALLVTHGHADHIMGLDEFRPLNRALGAAIPVYATPETLAELKRRFDYIFREPTPPV 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 Y P + PI + D ++ AG ++ Q H + +LG R G AY TDV P Sbjct: 118 FYRPALTPIAVGMQD---RIEPAGLPVQL--FRQDHKVMETLGLRIGRFAYSTDVVNLPE 172 Query: 193 ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 ESL L+ ++ ++ + HS H + L+ E + P+ +LTHM DLD+ + ++ Sbjct: 173 ESLAALEGVETWVVGCFQRQPHSVHAHVERVLEWRERLRPRRVVLTHMGHDLDWGWMQRN 232 Query: 253 TPSRVVPAFDGMQF 266 P V A DG+ Sbjct: 233 LPPGVEAAHDGLIL 246 >gi|320101936|ref|YP_004177527.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Isosphaera pallida ATCC 43644] gi|319749218|gb|ADV60978.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Isosphaera pallida ATCC 43644] Length = 267 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 93/265 (35%), Positives = 130/265 (49%), Gaps = 7/265 (2%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ILG G S GVP + D C +P+N RTR S +++DT Sbjct: 8 SATRRLIILGSGTSTGVPTLGCDCSVCLSRDPRNHRTRPSALFRLPQGD-----LLIDTT 62 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 P+ +Q+LRE V + A+ YTH HADH+ G+D R + P+ V+ + Sbjct: 63 PEMRLQLLRENVRFVHAIAYTHDHADHLMGLDDARLFPKYIGGPVPVFCEERVEDSIRRI 122 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 F Y F+ + +YP P + P G +PI HGRI LGFR G + Sbjct: 123 FHYAFQQ-EVLSYPFGGVPRLAFRRIQPGIAFETLGE-RVVPIRLDHGRIPVLGFRIGGL 180 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 AYCTDV P ESL L +LD L++D L+ H +H SL+ESL IE + P+ A+LTH+ Sbjct: 181 AYCTDVKRIPEESLPLLTDLDVLVLDTLRYEEHPTHLSLNESLALIERLAPRRAVLTHLS 240 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQF 266 D+ K+ P V A+DG+ Sbjct: 241 HAFDHHAAEKTLPPHVRLAYDGLMI 265 >gi|203284437|ref|YP_002222177.1| phnP protein [Borrelia duttonii Ly] gi|201083880|gb|ACH93471.1| phnP protein [Borrelia duttonii Ly] Length = 252 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 134/259 (51%), Gaps = 12/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 LG GAS GVP + + C+ KN+R RS+ +++DTGPD Q Sbjct: 4 IFLGTGASSGVPMLNCNCRVCNSDFCKNKRLRSAF-----LLSLCGLNLLIDTGPDIRTQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE +L +D VLYTH H DHI G+D ++ F + P+ +YA M H+ +F + F Sbjct: 59 LLRENILKLDLVLYTHEHYDHIMGLDDIK--FYTRCVPLPIYARETTMHHIKNAFPHNFS 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P + + + + I+ IPI HG I SLG+R N+AY TDV Sbjct: 117 SRMSISGKANILPRLAVDFE-----QIFFKGIKIIPIPLLHGDIISLGYRINNLAYLTDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ +D Sbjct: 172 KSIPEISYSYLEGLDVLVIDALRIKPHPGHLNFDDAILEVKKINPKIAYFTHIAHDIMHD 231 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG+Q Sbjct: 232 EFDYLRRDNIYLAYDGLQI 250 >gi|282889984|ref|ZP_06298519.1| hypothetical protein pah_c008o085 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500177|gb|EFB42461.1| hypothetical protein pah_c008o085 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 264 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 9/266 (3%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK FT LG G S+GVP I C +P N+R R S I +E+ +++D Sbjct: 1 MKTTGQFTFLGTGGSMGVPVIGCHCAVCSSPSPFNKRMRPSGLIQLGTEK-----ILIDA 55 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPD Q L ++ +D V++TH H DH GID LR Y++ + ++ + L Sbjct: 56 GPDHRNQALINRIDRLDGVIFTHAHHDHSAGIDDLRVYYMHTHKALECLMSKATYDELKY 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + Y F+ + ++ ++EN + SA + + G ++ GF+ GN Sbjct: 116 RYAYIFQPQEHYKLTTKMHIHLLENERGKVNFLSA----KLRYFTYEQGGMAVNGFKCGN 171 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +A+ +D+ +P E L + LII AL+ H ++ E+L E K TH+ Sbjct: 172 LAFVSDIRHYPESIFEDLSGTEILIISALRFTPSPLHLTVDEALAFAEKTQAKQVWFTHI 231 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LD++ P V A+DG+ F Sbjct: 232 AHELDHEKTNAYLPEHVRLAYDGLAF 257 >gi|85374074|ref|YP_458136.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] gi|84787157|gb|ABC63339.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] Length = 255 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 127/268 (47%), Gaps = 17/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVPRI GDWG CDP P+NRR+R S+ + V+VDT D Sbjct: 1 MKVVMLGTGTSTGVPRINGDWGDCDPNEPRNRRSRVSILLE----NKQGQRVLVDTSTDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L + S+D V +TH HADH HGID LR + + P+ +A+ +L + F + Sbjct: 57 RAQFLANGITSLDGVFWTHDHADHCHGIDDLRSFRYGRSAPLPGFASERTCANLRKRFSF 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 F + YP IV+ ++ D G +P HG S GF F + Sbjct: 117 VFAG--EHGYPTIVS---LQELDRQAMHAGFGLSWVEMP----HGPTYSTGFVFESDGKT 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + L+ + +D L+ D L+ H +H L +L+ + K ILTHM Sbjct: 168 IGYATDFSEITDAMLDTFKGIDILVCDCLRREPHPTHAHLGMALQFKQRTKAKRMILTHM 227 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + P V+ +DG++ + Sbjct: 228 DKSMDYRSLCDEVPKDVIVGYDGLEVEA 255 >gi|58038505|ref|YP_190469.1| PhnP protein [Gluconobacter oxydans 621H] gi|58000919|gb|AAW59813.1| PhnP protein [Gluconobacter oxydans 621H] Length = 265 Score = 271 bits (694), Expect = 6e-71, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 144/270 (53%), Gaps = 17/270 (6%) Query: 5 YHFTILGCGASLGVPRITGD-------WGACDPTNPKNRRTRSSLKISRVSERGSNTTVI 57 TILGCG S GVP I G+ WGACDPT P+NRRTRSS+ I ++ Sbjct: 1 MKVTILGCGGSAGVPMIGGEEGPRTGIWGACDPTEPRNRRTRSSVVIEGEG----GFRLL 56 Query: 58 VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 VD+GPDF Q+L + + AVLYTHPH+DHI G+D LR + P+ + AAPD ++ Sbjct: 57 VDSGPDFRNQMLNCGLSHVHAVLYTHPHSDHIGGLDELRAINRVIETPLPLLAAPDVLEE 116 Query: 118 LFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + Y F Y P+ + V++ + + G Q+HGRI+SLG Sbjct: 117 LRLRYAYAFAPWKGPEFYRPVFDEHVVQPGE---TVTFPGLTARI--FEQRHGRITSLGV 171 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 R GN AY TDV ESL L+ + I+D + H +H L L+ E + + I Sbjct: 172 RCGNFAYSTDVETLSEESLSLLEGVQTWIVDCFQYEPHPAHAWLERVLEWRERLGVGHVI 231 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTHM ++DY + ++ P+ V PA+DGM Sbjct: 232 LTHMGPEMDYQTLRQTLPAGVEPAYDGMVL 261 >gi|103486747|ref|YP_616308.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] gi|98976824|gb|ABF52975.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] Length = 254 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 18/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILGCG S GVPRI DWG CDP NP+N R+R+S+ +S R ++VDT PD Sbjct: 1 MKVRILGCGTSSGVPRIGNDWGQCDPDNPRNLRSRASILVSLGGFR-----ILVDTSPDM 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 MQ+L +V +DAV++TH HADH HG+D LR ++ + YA + L F Y Sbjct: 56 RMQLLDARVGEVDAVIWTHEHADHTHGLDDLRQIMHRRGAAVPCYARHHVLDILKWRFTY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 F + YP V+PI + ++ + G +E I HG I + G F + Sbjct: 116 AFAG--NAGYPASVDPIDLLDHQ-------SIGPVEVSAIEMPHGPIKASGLIFSDGAHR 166 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY TD + F E ++ Q +D +IDAL+ H +H L+ +L+ + + AI+THM Sbjct: 167 IAYATDFSRFTDEMVDFFQGVDLFVIDALRRYPHPTHPHLAMTLEGLAKVGHPRAIITHM 226 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY ++ PS V P +DG++ Sbjct: 227 DNTMDYADLVAELPSGVEPGYDGLEVQL 254 >gi|203287971|ref|YP_002222986.1| phnP protein [Borrelia recurrentis A1] gi|201085191|gb|ACH94765.1| phnP protein [Borrelia recurrentis A1] Length = 252 Score = 271 bits (693), Expect = 8e-71, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 12/259 (4%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 LG GAS GVP + + C+ KN+R RS+ +++D GPD Q Sbjct: 4 IFLGTGASSGVPMLNCNCRVCNSDFCKNKRLRSAF-----LLSLCGLNLLIDMGPDIRTQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LRE +L +D VLYTH H DHI G+D ++ F + P+ +YA M H+ +F + F Sbjct: 59 LLRENILKLDLVLYTHEHYDHIMGLDDIK--FYTRCVPLPIYARETTMHHIKNAFPHNFS 116 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + + P + + + + I+ IPI HG I SLG+R N+AY TDV Sbjct: 117 SRMSISGKANILPRLAVDFE-----QIFFKGIKIIPIPLLHGDIISLGYRINNLAYLTDV 171 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P S L+ LD L+IDAL+ H H + +++ +++ INPK A TH+ D+ +D Sbjct: 172 KSIPEISYSYLEGLDVLVIDALRIKPHPGHLNFDDAILEVKKINPKIAYFTHIAHDIMHD 231 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + A+DG+Q Sbjct: 232 EFDYLRRDNIYLAYDGLQI 250 >gi|15604699|ref|NP_221217.1| hypothetical protein RP869 [Rickettsia prowazekii str. Madrid E] gi|3861394|emb|CAA15293.1| unknown [Rickettsia prowazekii] gi|292572535|gb|ADE30450.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Rickettsia prowazekii Rp22] Length = 249 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 16/262 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGCGAS+GVP I + C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTVLGCGASIGVPVIGCECSTCTSPSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P ++Y + + L F Y Sbjct: 57 RNQLLREKINKLDCAILTHGHSDHVNGIDDLRVFTFMQDKPFEIYTDYNSVAQLHAKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F ++ + K IE Q HG I SLG R G+ Y Sbjct: 117 LFNLCK-----------LLATKSINFFDKIKINTIEVQFFRQHHGPIDSLGLRIGDFVYS 165 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L E NP+ +LT+M + Sbjct: 166 PDVIGFPPESEKFLKDIKIWILDCMDYRSNPNHAGLDKVLAWREKYNPEEILLTNMRHTI 225 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + K P+ V P +DG +F Sbjct: 226 DYHEIKKVLPNNVKPLYDGYKF 247 >gi|226941610|ref|YP_002796684.1| hydrolase protein [Laribacter hongkongensis HLHK9] gi|226716537|gb|ACO75675.1| probable hydrolase protein [Laribacter hongkongensis HLHK9] Length = 257 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 97/261 (37%), Positives = 145/261 (55%), Gaps = 10/261 (3%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+S G P I C +PKNRRTR+S +S +++DTGPD Q Sbjct: 6 TILGCGSSSGTPAIGCQCPTCTSDDPKNRRTRASSLVSV-----DGVHLLIDTGPDLRQQ 60 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE++ +DAVLYTHPHADH++GID LR + +K PI +Y + ++ E F YC Sbjct: 61 ALRERLTRVDAVLYTHPHADHLNGIDDLRAFCYLKKGPITLYGNRFMLDNIRERFGYCLL 120 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P+++ +E + +++AG ++ P+ +HGR LG+R G +AY TDV Sbjct: 121 PPGQFWDKPVLH---LEEAVPGVELEAAG--VKVEPVAVEHGRWQILGWRIGRMAYLTDV 175 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + P S +L+ LD L++D LK + SHF + ++L I + +L HM +L+Y Sbjct: 176 SCIPEASFARLEGLDLLLLDCLKYASYPSHFGVEQALAAAARIGARRTVLIHMTHELEYH 235 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + P V P FDGM+ + Sbjct: 236 TLAAQCPPGVEPGFDGMRLTL 256 >gi|157826356|ref|YP_001494076.1| beta-lactamase superfamily hydrolase [Rickettsia akari str. Hartford] gi|157800314|gb|ABV75568.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Rickettsia akari str. Hartford] Length = 254 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 11/264 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCGAS+GVP I D C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVVVLGCGASIGVPVIGCDCSICASHSKYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q +P +Y D +L+ F Y Sbjct: 57 RNQLLREKINKLDCAILTHYHSDHVNGIDDLRVFTFMQGKPFKIYTDHDSTANLYTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F + + V K IE Q HG I SLG R G+ Y Sbjct: 117 LFTNKLFKLG------RLFTTQSVSFFDKIKINTIEIQFFRQHHGPIDSLGLRIGDFVYS 170 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L+ E P+ +LT+M + Sbjct: 171 PDVIDFPPESEKFLKDIKIWILDCMDYKSNLNHAGLDKVLEWREKYQPEQILLTNMRHTI 230 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 DY + K P+ V P +DG +F+ Sbjct: 231 DYHEITKMLPNNVKPLYDGYRFTV 254 >gi|148259918|ref|YP_001234045.1| beta-lactamase domain-containing protein [Acidiphilium cryptum JF-5] gi|326403128|ref|YP_004283209.1| hypothetical protein ACMV_09800 [Acidiphilium multivorum AIU301] gi|146401599|gb|ABQ30126.1| beta-lactamase domain protein [Acidiphilium cryptum JF-5] gi|325049989|dbj|BAJ80327.1| hypothetical protein ACMV_09800 [Acidiphilium multivorum AIU301] Length = 267 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 97/275 (35%), Positives = 138/275 (50%), Gaps = 16/275 (5%) Query: 4 YYHFTILGCGASLGVPRITGDWGA-----CDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 + T+LG G S G+P+I G G CDP P+NRRTR+S+ S ++V Sbjct: 2 RFTLTLLGTGGSAGLPQIGGPDGGGDWGQCDPAEPRNRRTRASVVFSAA----DGQRILV 57 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 DT P+ +Q+ ++ IDAV+ THPHADHI G+D +R + PID Y L Sbjct: 58 DTAPEIRLQLTDNRIDRIDAVIITHPHADHIAGLDDIRILNRLRGTPIDAYTDERTWAEL 117 Query: 119 FESFRYCFKALDDRT-YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + F Y F+ + + P++ I + AG + I Q HG I SLG R Sbjct: 118 RQRFDYAFRPWEPPGFFRPVLRTHTILPGE---TRTIAGLPVRF--IRQDHGFIPSLGLR 172 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAI 236 GNVAYC DV F + L+ +D IID + G H +H L + ++ + P+ I Sbjct: 173 VGNVAYCPDVVRFTPDQFALLEGVDTWIIDCFTRRGPHPTHAHLDQVIEWATALRPRRTI 232 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 LTHM +D+DY + + P+ PAFDGM P Sbjct: 233 LTHMGLDMDYRTLCDTLPAGFEPAFDGMIIEGDAP 267 >gi|87199954|ref|YP_497211.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135635|gb|ABD26377.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 255 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 91/268 (33%), Positives = 129/268 (48%), Gaps = 17/268 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G S GVPRI DWG CDP P+NRRTR ++ I + ++VDT D Sbjct: 1 MKLTILGSGTSTGVPRIGNDWGDCDPNEPRNRRTRVAIAIE----GDDGSRLLVDTPTDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L + +D V +TH HADH HGID LR + PI YAA + ++ L + F Y Sbjct: 57 RQQFLSCGIERVDGVFWTHDHADHCHGIDDLRPLRYGRGGPIPGYAAAETVRRLRQRFGY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F Y I I+N D + G +P HG S FRF + Sbjct: 117 VFAGQ--HGYHTICE---IDNLDRVRMICGIGVSHCQMP----HGPAQSTAFRFDQGGKS 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + + + +D L++D L+ H +H L +L+ IE + +LTH+ Sbjct: 168 IGYATDFSEITGDMVALFHGIDVLVVDCLRRQPHPTHAHLGMALELIEATRANHGVLTHL 227 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DY + TP V PA+DG++ + Sbjct: 228 DKSMDYRTLCDETPPHVQPAYDGLEIAV 255 >gi|88606837|ref|YP_505618.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] gi|88597900|gb|ABD43370.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] Length = 263 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 137/270 (50%), Gaps = 13/270 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG+S+GVP + + G C +P N+RTR+S I + +T +++D PD Sbjct: 1 MKITILGCGSSVGVPSVGCECGVCASEHPHNKRTRTSALIEK-----GSTRLLIDASPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 +Q LR+ ++DAVL+TH HADH GI L+ + K I VY+ + + S Y Sbjct: 56 RIQALRQNFYTMDAVLFTHCHADHTTGISELQAFTPKVGYHIPVYSDFGTLALITASNAY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAY 183 F + P + N V ++ G + I Q HG ++S GF F N VAY Sbjct: 116 LF--IPSTPGAPWKKCHYLTVNPVRHNVEFNIGEFSIMAIKQSHGEVNSNGFIFDNSVAY 173 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 CTDV +FP S E+L+N +I L+ +H + ++ I + P A+ THM D Sbjct: 174 CTDVKSFPEASWERLRNKHMIIFGCLRYQAVGAHAHVDLCIEWIRELKPHIAVFTHMSHD 233 Query: 244 LDYDMVLKSTPS-----RVVPAFDGMQFSS 268 +DY+ +L S +VV A DG++ Sbjct: 234 IDYEQLLDYLHSKLPGQKVVVAHDGLELEL 263 >gi|297621461|ref|YP_003709598.1| putative metal-dependent hydrolase, beta- lactamase superfamily I [Waddlia chondrophila WSU 86-1044] gi|297376762|gb|ADI38592.1| putative metal-dependent hydrolase, beta- lactamase superfamily I [Waddlia chondrophila WSU 86-1044] Length = 246 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 9/253 (3%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 +GVP I C + KN+RTR S + + +++D GPDF Q LRE++ Sbjct: 1 MGVPIIGCRCPVCLSKDEKNKRTRPSAFL-----KAKGKAIVIDAGPDFRTQALREEISH 55 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 ID V++TH H DH G+D LR + +++ PI + L + Y F+ + Sbjct: 56 IDGVIFTHAHHDHTAGLDDLRVFTIRRSNPIPCLLSEKTANDLKRRYDYIFREGGESKLV 115 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 V ++E ++ I + + GF+ GN+A+ TD+ F Sbjct: 116 SKVELQILEEERG----ETHFLDISFRYLSYIQSGMLVNGFKVGNLAFITDIKNFSETIY 171 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 + LQ L++ AL++G H ++ E+L + + LTH+ +LD++ +S PS Sbjct: 172 DDLQGTKVLVVSALRHGPSHMHLTVEEALAFSRKVGAEQTWLTHIAHELDHEQTNRSLPS 231 Query: 256 RVVPAFDGMQFSS 268 V A+DG+ S Sbjct: 232 NVQLAYDGLTISF 244 >gi|229496718|ref|ZP_04390430.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] gi|229316366|gb|EEN82287.1| octanoyltransferase [Porphyromonas endodontalis ATCC 35406] Length = 512 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 15/268 (5%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+ ILG G S GVP + C T+P + RTR+S+ + +++D Sbjct: 4 KEIRSVRILGSGTSTGVPEVGCYCSTCLSTDPADNRTRTSVLLET----NEGKKILLDCS 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q + ++ +DA++ +H H DHI G+D LR R + +YA ++ + Sbjct: 60 PDFRQQAILAEIDELDAIVLSHEHYDHIAGLDDLRTIAWA--RDLPIYAENRVLEAIRYR 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 Y F Y + E + P ++ + PI HGR+ GFR G+ Sbjct: 118 LHYYF---GKTPYLGTPRLKLREISLAPFEVEG----LTFEPIRVFHGRLPITGFRIGDF 170 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHM 240 A+ TD+ P E +EKL+ +D L+++ L+ H +H ++ E++ + + +N + H+ Sbjct: 171 AFITDLKTIPDEEVEKLRGVDTLLVNGLRFTKPHPTHQTIEEAIALSKEVQARNTFIIHL 230 Query: 241 HVDLDYD-MVLKSTPSRVVPAFDGMQFS 267 + ++ P V ++DG++ Sbjct: 231 SHHAPRAVDLAQTLPEGVFASYDGLRLE 258 >gi|313886573|ref|ZP_07820287.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] gi|312923983|gb|EFR34778.1| lipoyl(octanoyl) transferase [Porphyromonas asaccharolytica PR426713P-I] Length = 523 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 14/260 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + S +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSTLVVSPS----GKRILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + + +YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTE--LPIYAEPNVLEAIKSRLHYYF-G 127 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P + I + + P + + PI HG+ LG+R G+ + TD+ Sbjct: 128 PHRYPGTPHLTLHPISSLE-PFTL----YDLTIEPIRVMHGKQPILGYRIGSFGFLTDLK 182 Query: 189 AFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + E LEKLQ ++ L ++ L+ H +H ++ E+++ + P+ + + H+ H Sbjct: 183 SIAPEELEKLQGVELLFVNGLRYTKPHPTHQTIEEAIELTARVQPQRSYIIHLSHHAPPT 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P V +DG+ Sbjct: 243 AELQERLPKGVYVGYDGLTL 262 >gi|332177456|gb|AEE13146.1| Octanoyltransferase [Porphyromonas asaccharolytica DSM 20707] Length = 523 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 14/260 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + S +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSTLVVSPS----GKRILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + + +YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTE--LPIYAEPNVLEAIKSRLHYYF-G 127 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P + I + + P + + PI HG+ LG+R GN + TD+ Sbjct: 128 PHRYPGTPHLTLHPISSLE-PFTL----YDLTIEPIRVMHGKQPILGYRIGNFGFLTDLK 182 Query: 189 AFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + E LEKL+ ++ L ++ L+ H +H ++ E+++ + P+ + + H+ H Sbjct: 183 SIAPEELEKLRGVELLFVNGLRYTKPHPTHQTIEEAIELTARVQPQRSYIIHLSHHAPPT 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + + P V +DG+ Sbjct: 243 AELQERLPKWVYVGYDGLTL 262 >gi|85708670|ref|ZP_01039736.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] gi|85690204|gb|EAQ30207.1| metal-dependent hydrolase [Erythrobacter sp. NAP1] Length = 260 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 88/273 (32%), Positives = 136/273 (49%), Gaps = 22/273 (8%) Query: 5 YHFTILGCGASLGVPRITGDWGA-----CDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 F +LG G S GVPRI G+ G CDP P+NRRTR S+ + +++D Sbjct: 1 MKFIMLGSGTSTGVPRIGGEDGEGDWGDCDPAEPRNRRTRVSILVE----SDEGRRLLID 56 Query: 60 TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 T D Q+L ++ IDAV +TH HADH HGID LR + PI YA+ + ++ L Sbjct: 57 TSSDCRAQLLANRIDKIDAVFWTHDHADHCHGIDDLRVLRYGRGGPIPAYASTETVRRLR 116 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F Y F D YP I + +E + AG +E +HG + G+RF Sbjct: 117 QRFGYVFAGQDG--YPTICSLETLERLKI-----VAGFGVEW--CQMEHGPGETTGYRFE 167 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNA 235 ++AY TD ++ E +E +D L+ D L+ H +H L+ +++ E Sbjct: 168 ADGKSIAYATDFSSISTEMVELYDGVDILVSDCLRREPHPTHAHLAMAIELAERSGAGQL 227 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +L+H+ +DY ++ P VV FDG++ ++ Sbjct: 228 VLSHLDKSMDYRTLVDEVPEGVVVGFDGLEMTA 260 >gi|51474038|ref|YP_067795.1| phosphonate metabolism protein PhnP [Rickettsia typhi str. Wilmington] gi|51460350|gb|AAU04313.1| phosphonate metabolism protein PhnP [Rickettsia typhi str. Wilmington] Length = 249 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 16/262 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGCGAS+GVP I + C + N+RTRS++ I N+ ++VD G D Sbjct: 2 LQVTVLGCGASIGVPVIGCECSTCTSPSQYNKRTRSAIYI-----NDENSQILVDFGFDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LRE++ +D + TH H+DH++GID LR + Q + ++Y + + L F Y Sbjct: 57 RNQLLREKINKLDCAILTHGHSDHVNGIDDLRVFTFMQDKTFEIYTDHNSVAKLHTKFDY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F ++ + K IE Q HG I SLG R G+ Y Sbjct: 117 LFNMCK-----------LLATKSINFFDKIKINTIEVQFFRQHHGPIDSLGLRIGDFVYS 165 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP ES + L+++ I+D + + +H L + L E NP+ +LT+M + Sbjct: 166 PDVIGFPPESEKFLKDIKIWILDCMDYRSNPNHAGLDKVLAWREKYNPEEILLTNMRHTI 225 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + K P V P +DG +F Sbjct: 226 DYHEIKKVLPKNVKPLYDGYKF 247 >gi|255003989|ref|ZP_05278790.1| PhnP protein [Anaplasma marginale str. Virginia] Length = 313 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C + N+RTR+S I + + ++VD PD Sbjct: 50 MKVTILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALIEK-----GDVRILVDASPDL 104 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Sbjct: 105 RAQALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNA 164 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + P + + V + G + + Q HG ++S GF F + +A Sbjct: 165 YFF--VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIA 222 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM Sbjct: 223 YCTDVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSH 282 Query: 243 DLDY----DMVLKSTP-SRVVPAFDGMQFSS 268 DLDY D V + P V+ A+DG++ + Sbjct: 283 DLDYHQLTDYVKEKLPGGNVLVAYDGLELNL 313 >gi|222474885|ref|YP_002563300.1| PhnP protein [Anaplasma marginale str. Florida] gi|222419021|gb|ACM49044.1| PhnP protein [Anaplasma marginale str. Florida] Length = 313 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C + N+RTR+S I + ++VD PD Sbjct: 50 MKVTILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALIE-----NGDVRILVDASPDL 104 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Sbjct: 105 RAQALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNA 164 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + P + + V + G + + Q HG ++S GF F + +A Sbjct: 165 YFF--VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIA 222 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM Sbjct: 223 YCTDVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSH 282 Query: 243 DLDY----DMVLKSTP-SRVVPAFDGMQFSS 268 DLDY D V + P V+ A+DG++ + Sbjct: 283 DLDYHQLTDYVKEKLPGGNVLVAYDGLELNL 313 >gi|326387754|ref|ZP_08209360.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207800|gb|EGD58611.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 255 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 17/265 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVPRI DWGACDP P+NRRTR ++ + + ++VDT PD Sbjct: 1 MKLIMLGSGTSTGVPRIGNDWGACDPAEPRNRRTRVAIVVE----GDDGSRLLVDTPPDL 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+L V ID V +TH HADH HGID LR + + P+ YAA + ++ L F Y Sbjct: 57 RQQLLATSVDRIDGVFWTHDHADHTHGIDDLRPLRMGRGAPLPGYAADETVRRLRMRFGY 116 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 F YP I + ++N D + G HG S FRF + Sbjct: 117 VFAGQ--HGYPTICS---LDNLDRVRMVAGIG----VSHCQMAHGPAQSTAFRFDQGGKS 167 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + Y TD + A+ + +D L++DAL+ H +H +L+ +L+ +A+LTH+ Sbjct: 168 IGYATDFSEINADMVALFDRVDVLVVDALRRQAHPTHANLAMALELANAARVGHAVLTHL 227 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQ 265 +DY + P V P +DG++ Sbjct: 228 DKSMDYRSLCDELPPHVEPGYDGLE 252 >gi|255002856|ref|ZP_05277820.1| PhnP protein [Anaplasma marginale str. Puerto Rico] Length = 302 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C + N+RTR+S I + ++VD PD Sbjct: 39 MKVTILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALIE-----NGDVRILVDASPDL 93 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Sbjct: 94 RAQALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNA 153 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + P + + V + G + + Q HG ++S GF F + +A Sbjct: 154 YFF--VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIA 211 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM Sbjct: 212 YCTDVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSH 271 Query: 243 DLDY----DMVLKSTP-SRVVPAFDGMQFSS 268 DLDY D V + P V+ A+DG++ + Sbjct: 272 DLDYHQLTDYVKEKLPGGNVLVAYDGLELNL 302 >gi|56416517|ref|YP_153591.1| hypothetical protein AM220 [Anaplasma marginale str. St. Maries] gi|269959069|ref|YP_003328858.1| putative hydrolase [Anaplasma centrale str. Israel] gi|56387749|gb|AAV86336.1| hypothetical protein AM220 [Anaplasma marginale str. St. Maries] gi|269848900|gb|ACZ49544.1| putative hydrolase [Anaplasma centrale str. Israel] Length = 287 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C + N+RTR+S I + ++VD PD Sbjct: 24 MKVTILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALIE-----NGDVRILVDASPDL 78 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Sbjct: 79 RAQALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNA 138 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + P + + V + G + + Q HG ++S GF F + +A Sbjct: 139 YFF--VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIA 196 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM Sbjct: 197 YCTDVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSH 256 Query: 243 DLDY----DMVLKSTP-SRVVPAFDGMQFSS 268 DLDY D V + P V+ A+DG++ + Sbjct: 257 DLDYHQLTDYVKEKLPGGNVLVAYDGLELNL 287 >gi|254994739|ref|ZP_05276929.1| hypothetical protein AmarM_00907 [Anaplasma marginale str. Mississippi] Length = 289 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG S+GVP + D C + N+RTR+S I + ++VD PD Sbjct: 26 MKVTILGCGYSMGVPTVGCDCSVCSSDSAFNKRTRTSALIE-----NGDVRILVDASPDL 80 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q LR ++ +D+VL+TH HADH GI L+ + + + VYA + L S Sbjct: 81 RAQALRHKLHVLDSVLFTHCHADHCAGIAELQAFNVGGGANCMPVYADYGTLSMLLASNA 140 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + P + + V + G + + Q HG ++S GF F + +A Sbjct: 141 YFF--VPGKPGAPWKKCHYLVAHPVRYHTEFFVGGCKIVSFKQIHGEVNSSGFLFDDDIA 198 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP S + L N LI+ L+ ++H + ++ I+ + P A+LTHM Sbjct: 199 YCTDVKSFPQNSWDLLHNRRLLILGCLRYEEVAAHAHVDLCIEWIKELKPDTAVLTHMSH 258 Query: 243 DLDY----DMVLKSTP-SRVVPAFDGMQFSS 268 DLDY D V + P V+ A+DG++ + Sbjct: 259 DLDYHQLTDYVKEKLPGGNVLVAYDGLELNL 289 >gi|297829934|ref|XP_002882849.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328689|gb|EFH59108.1| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] Length = 359 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 130/286 (45%), Gaps = 26/286 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSN 53 +G G S G+PR++ C KNRR +S+ + + G+ Sbjct: 74 KSSEIVFMGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGNKNRRLNTSILVRYIRPSGT- 132 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +++D G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y Sbjct: 133 SNILIDCGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIY 192 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A ++ + ++ Y D P +E + ++ P+ HG Sbjct: 193 TAMRDLEVMKKTHYYLV---DTSVIIPGAAVSELEFKIIHEDQPFVVNDLKITPLPVWHG 249 Query: 170 -RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ ++HF L +L+++ Sbjct: 250 SNYRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEV 309 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V + V ++DG++ Sbjct: 310 RKIKPKRTLFTGMMHLMDHEKVSEELEKIRDTEGLDVQLSYDGLRV 355 >gi|189184651|ref|YP_001938436.1| PhnP protein [Orientia tsutsugamushi str. Ikeda] gi|189181422|dbj|BAG41202.1| PhnP protein [Orientia tsutsugamushi str. Ikeda] Length = 249 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 16/262 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGCG SLGVP I C N+R RSSL + +E ++++D+G D Sbjct: 2 WKVIVLGCGPSLGVPVIGCKCSVCMSNIKFNKRLRSSLYLQYNNE----ISILIDSGCDI 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DA++ THPH+DHI GID LR + + +DVYA + + ++ +++ Y Sbjct: 58 RFQLLRANITKLDAIILTHPHSDHIAGIDNLRVFTYQNGCSLDVYANAETVDYITKNYSY 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ ++N I I++ + +K E Q HG I+SLG R N Y Sbjct: 118 LFERN-------LLNAIKIDDYGT-VNIKGK----EITTFQQNHGDINSLGIRIKNFVYS 165 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP +S + L +D ++D L+ +H L+E ++ E PK LT+M+ + Sbjct: 166 NDVRKFPRKSYQFLSKIDVWMLDCLQVIATDAHAGLNEVMQWNEQFMPKKIYLTNMNHTI 225 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + + A+DG++F Sbjct: 226 DYYGIQPMLSKNIALAYDGLEF 247 >gi|42564134|ref|NP_187996.2| metallo-beta-lactamase family protein [Arabidopsis thaliana] gi|62318851|dbj|BAD93913.1| hydrolase like protein [Arabidopsis thaliana] gi|63003856|gb|AAY25457.1| At3g13800 [Arabidopsis thaliana] gi|90093300|gb|ABD85163.1| At3g13800 [Arabidopsis thaliana] gi|110739543|dbj|BAF01680.1| hydrolase like protein [Arabidopsis thaliana] Length = 361 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 26/286 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSN 53 + +G G S G+PR++ C +NRR +S+ + + G+ Sbjct: 76 ESSEIVFMGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGNRNRRLNTSILVRYIRPSGT- 134 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +++D G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y Sbjct: 135 SNILIDCGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIY 194 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A ++ + ++ Y D P +E + ++ P+ HG Sbjct: 195 TAIRDLEVMKKTHYYLV---DTSVIIPGAAVSELEFKVIHEDQPFVVNDLKITPLPVWHG 251 Query: 170 -RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ ++HF L +L+++ Sbjct: 252 SNYRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEV 311 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V + V ++DG++ Sbjct: 312 RKIKPKRTLFTGMMHLMDHEKVSEELEKLRNTEGLDVQLSYDGLRV 357 >gi|228471110|ref|ZP_04055934.1| octanoyltransferase [Porphyromonas uenonis 60-3] gi|228307118|gb|EEK16179.1| octanoyltransferase [Porphyromonas uenonis 60-3] Length = 517 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 14/260 (5%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G S GVP + C +P+++RTR+S + S R +++D DF Q Sbjct: 15 LLGSGTSTGVPEVGCYCRTCLSLDPRDQRTRTSALMVSPSGR----RILIDCSADFRQQA 70 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + +DA++ TH H DHI G+D LR + + + +YA P+ ++ + Y F Sbjct: 71 LLAGIDHLDAIILTHQHYDHIGGLDDLRTISWRTE--LPIYAEPNVLESIKARLHYYF-G 127 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P + I + + P + + PI HG+ LG+R G+ + TD+ Sbjct: 128 PHRYPGTPHLTLHPISSLE-PFTL----YDLTIEPIRVMHGKQPILGYRIGSFGFLTDLK 182 Query: 189 AFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDY 246 + E +EKL+ ++ L ++ L+ H +H ++ E+L+ + P+ + + H+ H Sbjct: 183 SIAPEEIEKLRGVELLFVNGLRYTKPHPTHQTIEEALELTAKVQPQRSYIIHLSHHAPPT 242 Query: 247 DMVLKSTPSRVVPAFDGMQF 266 + P V +DG+ Sbjct: 243 AELQVRLPEGVYVGYDGLTL 262 >gi|144899821|emb|CAM76685.1| PhnP-like protein [Magnetospirillum gryphiswaldense MSR-1] Length = 263 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 101/263 (38%), Positives = 138/263 (52%), Gaps = 14/263 (5%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCGA+ GVP I+ WGACDP NP+NRR R S+ I G + ++VDT PD Q Sbjct: 4 TILGCGAAGGVPSISRGWGACDPDNPRNRRRRPSILI-----HGPDGAILVDTSPDCREQ 58 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L + + AVLYTH HADH+HGID LR + + ++A + + F Y Sbjct: 59 LLDTGINRLAAVLYTHDHADHMHGIDDLREVNRAMRAHLPIHATAGVLDCIRSRFPYVVG 118 Query: 128 ALDD--RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 + + Y P+++ I+ + G +E +P Q HG + GFRFG +AY T Sbjct: 119 GVGEGQSIYKPLLDLHPIDG-------VFSVGGVEVVPFDQDHGYCRTTGFRFGPLAYST 171 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 DV P S + L +D I+ L H +H L + L IE I P+ AILTHM LD Sbjct: 172 DVVELPESSFDILAGIDTWIVGCLSYDPHPTHAHLDKVLGWIERIRPRQAILTHMTPSLD 231 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 YD + P V PA DG+ + Sbjct: 232 YDTLCNILPPHVRPAHDGLIIEA 254 >gi|225442301|ref|XP_002280465.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743093|emb|CBI35960.3| unnamed protein product [Vitis vinifera] Length = 350 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 27/290 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACD-PTNP--KNRRTRSSLKISRVSERGSN 53 + LG G S G+PR++ C +P KNRR +S+ I S G Sbjct: 66 EQSEIIFLGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSSKNRRLNTSILIRYPSSSG-G 124 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T+++D G FY LR + +IDAV+ TH HAD I G+D LR + + I +Y Sbjct: 125 CTILIDVGKFFYHSALRWFPTFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIY 184 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 AP + + ++ Y + ++ P + ++ IP+ HG Sbjct: 185 VAPRDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIIHEEPFIVH----DLKVIPLPVWHG 240 Query: 170 R-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 SLGFRFGN+ Y +DV+ P E+ L+N + L++DAL+ ++HF L +L ++ Sbjct: 241 PGYRSLGFRFGNICYISDVSEIPEETYPLLKNCEILVLDALRPDRSSATHFGLPRALDEV 300 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQFSSPI 270 I PK + T M +D++ V + V ++DG++ + Sbjct: 301 RKIQPKRTLFTGMMHLMDHEKVSEDLEKLKKTEGLDVQLSYDGLRVPVTL 350 >gi|255644437|gb|ACU22723.1| unknown [Glycine max] Length = 342 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 26/286 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSN 53 D LG G S GVPR++ C KNRR +S+ I + G++ Sbjct: 57 DQTELIFLGTGTSEGVPRVSCLTNPLLKCEVCSKAARPGNKNRRLNTSILIRHPNSSGTH 116 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G FY L + +IDAV+ TH HAD I G+D LR + + I +Y Sbjct: 117 NNILIDAGKFFYHSALHWFPAFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIY 176 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + + ++ Y + ++ P + ++ P+ HG Sbjct: 177 VAKRDFEVMTKTHYYLVDTSVILPGAKVSELQFNIISEEPFFVH----ELKFTPLPVWHG 232 Query: 170 -RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKKI 227 SLGFRFGN+ Y +DV+ P E+ L++ + LI+DAL+ S+HF L +L+++ Sbjct: 233 QNYRSLGFRFGNICYISDVSDIPEETYPLLKDCEILILDALRPDRSTSTHFGLQRALEEV 292 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V S ++DG++ Sbjct: 293 RKIQPKRTLFTGMMHLMDHEEVNDSLAKLLESEGLDAQLSYDGLRI 338 >gi|9294602|dbj|BAB02903.1| hydrolase-like protein [Arabidopsis thaliana] Length = 309 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 26/286 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSN 53 + +G G S G+PR++ C +NRR +S+ + + G+ Sbjct: 24 ESSEIVFMGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGNRNRRLNTSILVRYIRPSGT- 82 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +++D G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y Sbjct: 83 SNILIDCGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIY 142 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A ++ + ++ Y D P +E + ++ P+ HG Sbjct: 143 TAIRDLEVMKKTHYYLV---DTSVIIPGAAVSELEFKVIHEDQPFVVNDLKITPLPVWHG 199 Query: 170 -RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 SLGFRFGNV Y +DV+ P E+ L++ D LI+DAL+ ++HF L +L+++ Sbjct: 200 SNYRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEV 259 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V + V ++DG++ Sbjct: 260 RKIKPKRTLFTGMMHLMDHEKVSEELEKLRNTEGLDVQLSYDGLRV 305 >gi|255572929|ref|XP_002527395.1| catalytic, putative [Ricinus communis] gi|223533205|gb|EEF34961.1| catalytic, putative [Ricinus communis] Length = 346 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 27/291 (9%) Query: 2 KDYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGS 52 D +G G S G+PR++ C KNRR + L I G+ Sbjct: 61 TDQSEIIFMGTGTSEGIPRVSCLTNPLKKCPVCSKAVEPGNKNRRLNTGLLIRYAGPAGT 120 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G FY LR + +IDAV+ TH HAD I G+D LR + + I + Sbjct: 121 Q-NILIDAGKFFYHSALRWFPTFGLRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPI 179 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y A + + ++ Y + ++ P + ++ P+ H Sbjct: 180 YVAERDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIMHEEPFIV----CDLKITPLPVWH 235 Query: 169 GR-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKK 226 G SLGFRFG + Y +DV+ P E+ L++ + LI+DAL+ S+HF L +L + Sbjct: 236 GPGYRSLGFRFGKICYISDVSDIPEETYPLLKDCEILILDALRPDRSSSTHFGLPRALDE 295 Query: 227 IELINPKNAILTHMHVDLDYDMVLKST-------PSRVVPAFDGMQFSSPI 270 + I PK + T M +D++ V + V ++DG++ + Sbjct: 296 VRKIQPKRTLFTGMMHLMDHEKVNEYLLKLMESEGLDVQLSYDGLRVPVTL 346 >gi|188994995|ref|YP_001929247.1| putative hydrolase [Porphyromonas gingivalis ATCC 33277] gi|188594675|dbj|BAG33650.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 492 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP + C + ++RTR+SL I + +++D PDF Sbjct: 1 MRCILLGSGTSTGVPEVGCHCRVCRSKDRHDKRTRTSLLIIT----DAGKRILIDCSPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L + S+DAVL TH H DHI G+D LR R + VYA + + + + Y Sbjct: 57 RQQALFAGIDSLDAVLLTHEHFDHIGGLDDLRTICW--HRELAVYAEQNVLDSIRDRLHY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ P +++ +V M + P+ HGR+ LG++ G +A+ Sbjct: 115 VFRKNPYPGTP------LLKLCEVKPDMPFQVADLTVEPLRIMHGRLPILGYKIGKMAFL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ AE +E L++ L I+ L+ H SH ++ +++ I I ++L H+ Sbjct: 169 TDMKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAINTIGQIGNPESVLIHLSHH 228 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQ 265 + L+ P + +DG++ Sbjct: 229 APLHQEHLEILPPHIHSGYDGLE 251 >gi|34541031|ref|NP_905510.1| lipoate-protein ligase B [Porphyromonas gingivalis W83] gi|39931715|sp|Q7MUY1|LIPB_PORGI RecName: Full=Octanoyltransferase; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase gi|34397346|gb|AAQ66409.1| lipoate-protein ligase B [Porphyromonas gingivalis W83] Length = 492 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 14/263 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G S GVP + C + ++RTR+SL I + +++D PDF Sbjct: 1 MRCILLGSGTSTGVPEVGCHCRVCRSEDRHDKRTRTSLLIIT----DAGKRILIDCSPDF 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q L + S+DAVL TH H DH+ G+D LR R + VYA + + + + Y Sbjct: 57 RQQALFAGIDSLDAVLLTHEHFDHVGGLDDLRTICW--HRELAVYAEQNVLDSIRDRLHY 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ P +++ +V M + P+ HGR+ LG++ G +A+ Sbjct: 115 VFRKNPYPGTP------LLKLCEVKPDMPFQVADLTVEPLRIMHGRLPILGYKIGEMAFL 168 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD+ AE +E L++ L I+ L+ H SH ++ +++ I I ++L H+ Sbjct: 169 TDMKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAIDTIGQIGNPESVLIHLSHH 228 Query: 244 LD-YDMVLKSTPSRVVPAFDGMQ 265 + L+ P + +DG++ Sbjct: 229 APLHQEHLEILPPHIHSGYDGLE 251 >gi|182413874|ref|YP_001818940.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177841088|gb|ACB75340.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 259 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 19/271 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I D C +P+N+RTR+S+ + V VD P+F Sbjct: 1 MEVIFLGTGTSQGVPMIGCDCAVCRSPDPRNKRTRTSVHVVM-----DGLHVQVDAAPEF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 +Q L + +D + TH HADHI G+D LR + L +R +DVY + M F Sbjct: 56 RLQCLACDIRWVDFFILTHGHADHITGMDDLRRFCDLLGERALDVYTTDEGMSRTLSLFP 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y ++ P G IE+ L HGR+++LG F Sbjct: 116 YAVAERPIARGYAAFKLALM-----PPKRDLPQGTIEST--LLPHGRLNTLGLVFTERSS 168 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 Y TD P E++ + D +++D L+ H SH S+ E++ + I K L Sbjct: 169 GRKFVYYTDCKTVPPEAIALARGADVVVLDGLRTDPHPSHMSIPEAIAVAQEIGAKQTWL 228 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 TH+ D+ + P+ + A+DG++ + Sbjct: 229 THLTHLNDHAITEAELPAGIRLAYDGLRLTI 259 >gi|296116329|ref|ZP_06834945.1| beta-lactamase domain protein [Gluconacetobacter hansenii ATCC 23769] gi|295977148|gb|EFG83910.1| beta-lactamase domain protein [Gluconacetobacter hansenii ATCC 23769] Length = 254 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 11/259 (4%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 GC S G DWG CDP P+N R RSS+ + + ++VDTGPD Q+L Sbjct: 6 GCQWSAGWTGQG-DWGLCDPCEPRNARLRSSVLLR----DDTGNALLVDTGPDLRAQLLA 60 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL- 129 +++ +DAVLYTH HADHI G+D LR RPI Y D + L F Y F+ Sbjct: 61 QRITRVDAVLYTHAHADHIAGLDELRAINRIIGRPIPAYGTRDVIDELVTRFDYVFRPWT 120 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 Y P++ P VIE + AG + Q HG +LG R G +AYCTDV Sbjct: 121 PPSFYRPVLTPHVIEAGGEAM---IAGMNVHV--FRQVHGHTLTLGLRVGPMAYCTDVAE 175 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 +L+ L +D ++ + H SH L + E I P+ +LTHM D+D+D + Sbjct: 176 LDDTALDILHGVDTWVVGCFQRTTHVSHGWLERVFEWRERIRPRRTVLTHMGPDMDWDWM 235 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + P+ V A+DG+ + Sbjct: 236 QRHLPAGVEAAYDGLTLRT 254 >gi|148285037|ref|YP_001249127.1| hypothetical protein OTBS_1916 [Orientia tsutsugamushi str. Boryong] gi|146740476|emb|CAM81011.1| conserved hypothetical protein [Orientia tsutsugamushi str. Boryong] Length = 249 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 16/262 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGCG SLGVP I C N+R RSSL + E ++++D+G D Sbjct: 2 WKVIVLGCGPSLGVPVIGCKCSVCMSNIEFNKRLRSSLYLQYNHE----ISILIDSGCDI 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+LR + +DAV+ THPH+DHI GID LR + + +DVYA + + ++ +++ Y Sbjct: 58 RFQLLRANITKLDAVILTHPHSDHIAGIDNLRVFTYQNGCSLDVYANVETVDYITKNYSY 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F+ ++N I I++ + +K E Q HG I+SLG R N Y Sbjct: 118 LFERN-------LLNAIKIDDYGT-VNIKGK----EITTFQQNHGDINSLGIRIKNFVYS 165 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 DV FP +S + L +D ++D L+ +H L+E ++ E PK LT+M+ + Sbjct: 166 NDVRKFPRKSYQFLSKIDVWMLDCLQVIATDAHAGLNEVMQWNEQFMPKKIYLTNMNHTI 225 Query: 245 DYDMVLKSTPSRVVPAFDGMQF 266 DY + + A+DG++F Sbjct: 226 DYYGIQPMLSRNIALAYDGLEF 247 >gi|302775094|ref|XP_002970963.1| hypothetical protein SELMODRAFT_95258 [Selaginella moellendorffii] gi|300160945|gb|EFJ27561.1| hypothetical protein SELMODRAFT_95258 [Selaginella moellendorffii] Length = 283 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 26/278 (9%) Query: 8 TILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIV 58 LG G S GVPR++ C KNRR +S+ + G+ ++V Sbjct: 3 IFLGTGTSEGVPRVSCLTNRYKRCPVCFAALQVGNKNRRRNTSIIVRYPRRDGTRMNILV 62 Query: 59 DTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D G FY L+ + +DAV+ TH HAD I G+D LR + + I +Y A Sbjct: 63 DAGKFFYHSALQWFPYYGLRHLDAVIITHSHADAIGGLDDLRDWTNNIQDSIPIYVAQRD 122 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISS 173 ++ + ++ Y + ++ P ++ ++ P+ HG S Sbjct: 123 LEVMRKTHYYLLDPTVITEGTQVSKLQFKVIDEQPFFVE----DVKVTPLPVWHGPGYRS 178 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINP 232 LGFR ++ Y +DV+ P E+ LQN D L++DAL+ ++HFSL ++L ++ ++P Sbjct: 179 LGFRIADMCYISDVSEIPEETYALLQNCDLLVVDALRPDRPSTTHFSLDQALDAVKRVHP 238 Query: 233 KNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 K + T M +D+D V K V +FDG Sbjct: 239 KRTLFTGMMHTMDHDKVNKQLADLKHSEGLDVQLSFDG 276 >gi|168050596|ref|XP_001777744.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670845|gb|EDQ57406.1| predicted protein [Physcomitrella patens subsp. patens] Length = 385 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 124/285 (43%), Gaps = 26/285 (9%) Query: 4 YYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSNT 54 LG G S G+PR++ C KNRR +SL + ++ GS Sbjct: 101 TSEIIFLGTGTSEGIPRVSCLTNPDKSCPVCLAAAQLGNKNRRRNTSLLVRYLAPDGSLY 160 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G FY L+ + ID+V+ TH HAD G+D LR + + I +Y Sbjct: 161 NILIDAGKFFYHSALQWFPYYGIRKIDSVIITHAHADANGGLDDLRDWTNNVQPHIPIYV 220 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +S Y + I ++ P + ++ P+ HG Sbjct: 221 GLRDLTVMAKSHYYLVDTTVIMKGTAVTKLQFIPMSEEPFQVHG----LKVTPLPVWHGP 276 Query: 171 -ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIE 228 SLGFR G+V Y +D + PAE+ L+N D LI+DAL+ S+HF + +L+++ Sbjct: 277 GYRSLGFRIGDVCYISDASEIPAETYPLLENCDLLILDALRPDRSSSTHFGMPAALEEVR 336 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D+ + V +FDGM+ Sbjct: 337 KIRPKRTLFTGMMHTMDHHKINTFLAKLLESEGLDVQLSFDGMKL 381 >gi|262277650|ref|ZP_06055443.1| metallo-beta-lactamase family protein [alpha proteobacterium HIMB114] gi|262224753|gb|EEY75212.1| metallo-beta-lactamase family protein [alpha proteobacterium HIMB114] Length = 254 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 100/269 (37%), Positives = 149/269 (55%), Gaps = 17/269 (6%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ILGCG+S GVP+I GDWG C N KN RTR S+ + N I+DT Sbjct: 1 MTKNF-IKILGCGSSQGVPKIDGDWGQCK-KNIKNIRTRCSIFVQI-----KNIKFIIDT 53 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 PD Q+L+ ++ +ID L+TH HADHI GI+ LR +++KQK+ ++Y K L + Sbjct: 54 SPDIRFQLLKNKIDNIDFALFTHAHADHILGINELRTFYIKQKKKFNIYLTKFTEKSLKK 113 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F+Y F ++ + YP ++ +I N K + I HG + ++G+R N Sbjct: 114 MFKYLF--INQKNYPAVLKSNIILN-------KKKVRNLNIQAINVIHGTMKTIGYRINN 164 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 AY D L+KLQNLD LIID + H++H +L+E L I+ INPK A LT++ Sbjct: 165 FAYIPDFKKINNSELKKLQNLDVLIIDCFRYKEHNTHVNLTECLHYIKNINPKKAYLTNL 224 Query: 241 HVDLDY-DMVLKSTPSRVVPAFDGMQFSS 268 + DLDY + K + + P++DG++ Sbjct: 225 NQDLDYFKLKKKIKKNNINPSYDGLKIKL 253 >gi|145332379|ref|NP_001078146.1| metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 279 Score = 256 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 26/279 (9%) Query: 10 LGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +G G S G+PR++ C +NRR +S+ + + G+ + +++D Sbjct: 1 MGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGNRNRRLNTSILVRYIRPSGT-SNILIDC 59 Query: 61 GPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 G FY LR + ++DAV+ TH HAD I G+D LR + + I +Y A ++ Sbjct: 60 GKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPHIPIYTAIRDLE 119 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLG 175 + ++ Y D P +E + ++ P+ HG SLG Sbjct: 120 VMKKTHYYLV---DTSVIIPGAAVSELEFKVIHEDQPFVVNDLKITPLPVWHGSNYRSLG 176 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKN 234 FRFGNV Y +DV+ P E+ L++ D LI+DAL+ ++HF L +L+++ I PK Sbjct: 177 FRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEEVRKIKPKR 236 Query: 235 AILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 + T M +D++ V + V ++DG++ Sbjct: 237 TLFTGMMHLMDHEKVSEELEKLRNTEGLDVQLSYDGLRV 275 >gi|48716734|dbj|BAD23415.1| hydrolase-like protein [Oryza sativa Japonica Group] gi|50726197|dbj|BAD33716.1| hydrolase-like protein [Oryza sativa Japonica Group] Length = 311 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 27/287 (9%) Query: 2 KDYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGS 52 + LG G S G+PR++ C +NRR +S+ + + G+ Sbjct: 26 RQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVCTKAAEPGNRNRRRNTSILLRHATPSGT 85 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G FY L+ + +IDAV+ TH HAD I G+D LR + + I + Sbjct: 86 -ANILIDAGKFFYHSALQWFPAYGLRTIDAVIITHSHADAIGGLDCLRDWTNNVQPTIPI 144 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y A + + + Y + + P + + +E IP+ H Sbjct: 145 YVAERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFTVHN----LEVIPLPVWH 200 Query: 169 GR-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKK 226 G+ SLGFRFG V Y +DV+ P E+ + L++ + LI+DAL+ S+HF L +L++ Sbjct: 201 GQGYRSLGFRFGRVCYISDVSDIPKETYKLLEDCELLIMDALRPDRSSSTHFGLPRALEE 260 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 + I PK + T M +D++ V + ++DG++ Sbjct: 261 VRKIKPKKTLFTGMMHLMDHEKVNNELAKLMETEGLDIQLSYDGLRV 307 >gi|302757403|ref|XP_002962125.1| hypothetical protein SELMODRAFT_76733 [Selaginella moellendorffii] gi|300170784|gb|EFJ37385.1| hypothetical protein SELMODRAFT_76733 [Selaginella moellendorffii] Length = 283 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 26/278 (9%) Query: 8 TILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIV 58 LG G S GVPR++ C KNRR +S+ + G+ ++V Sbjct: 3 IFLGTGTSEGVPRVSCLTNRYKRCPVCFAALQVGNKNRRRNTSIIVRYPRRDGTRMNILV 62 Query: 59 DTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D G FY L+ + +DAV+ TH HAD I G+D LR + + I +Y A Sbjct: 63 DAGKFFYHSALQWFPYYGLRHLDAVIITHSHADAIGGLDDLRDWTNNIQDSIPIYVAQRD 122 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISS 173 ++ + ++ Y + ++ P ++ ++ P+ HG S Sbjct: 123 LEVMGKTHYYLLDPTVITEGTQVSKLQFKVIDEQPFFVE----DVKVTPLPVWHGPGYRS 178 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINP 232 LGFR ++ Y +DV+ P E+ LQN D L++DAL+ ++HFSL ++L ++ ++P Sbjct: 179 LGFRIADMCYISDVSEIPEETYALLQNCDLLVVDALRPDRPSTTHFSLDQALDAVKRVHP 238 Query: 233 KNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 K + T M +D+D V K V +FDG Sbjct: 239 KRTLFTGMMHTMDHDKVNKQLADLKHSEGLDVQLSFDG 276 >gi|326516560|dbj|BAJ92435.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 370 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 27/284 (9%) Query: 5 YHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSNTT 55 LG G S GVPR++ C +NRR +S+ + V+ + + Sbjct: 88 SELIFLGTGTSEGVPRVSCLTHPSKTCPVCTKAAEPGNRNRRRNTSILLRHVTPSRT-SN 146 Query: 56 VIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +++D G FY L+ + IDAV+ TH HAD I G+D LR + + I +Y A Sbjct: 147 ILIDAGKFFYHSALQWFPAFGLREIDAVIITHSHADAIGGLDCLRDWTNNVQPSIPIYVA 206 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR- 170 P + + + Y + N+ P ++ +E IP+ HG+ Sbjct: 207 PRDYEVMKMTHHYLVDTSTVIPGAAVSTLQFNIINEEPFTVQ----DLEVIPLPVWHGQG 262 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIEL 229 SLGFRFG++ Y +DV+ P E+ + L++ LI+DAL+ S+HF L +L+++ Sbjct: 263 YRSLGFRFGDICYISDVSDIPDETYKLLEDCQLLILDALRPDRSSSTHFGLPRALEEVRK 322 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V V ++DG+ Sbjct: 323 IKPKRTLFTGMMHLMDHEKVNDDLARLMETEGLDVQLSYDGLSI 366 >gi|332180861|gb|AEE16549.1| beta-lactamase domain protein [Treponema brennaborense DSM 12168] Length = 302 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 35/298 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVS-ERGSNTTVIVDTGPD 63 +LG G S G+P I C ++ +++R RSSL I+ S + G+ T++I+DTGP+ Sbjct: 1 MQCVLLGTGTSHGIPVIGCSCPCCTSSDARDKRLRSSLWITDGSADSGAYTSIIIDTGPE 60 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--------QKRPIDVYAAPDCM 115 F +Q LR + +DAV TH HADH++G+D +R + + VY + Sbjct: 61 FRIQALRFGIKKLDAVFLTHGHADHLNGLDDVRIFSHTCPGAAADSSDAGLPVYGNAQTI 120 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + E F Y F + P ++ +V ++ +K+ G + IP+ HG + + G Sbjct: 121 TDVHERFSYIFHPPTEGGGTPKLHTVVCSSSRDAEGIKA--GSLTLIPVPLLHGSLETTG 178 Query: 176 FRFGN----VAYCTDVNAFPAESLEKLQN----LDFLIIDALKNGLHSSHFSLSESLKKI 227 + + VAY TD + P S+ LQ+ ++ LIID L+ H +H S ES+ Sbjct: 179 WLVSDGRSSVAYLTDCSVIPDYSIALLQSQRTPIEHLIIDGLRRRPHDTHLSFDESIAYA 238 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFDGMQFSSP 269 K+ LTH+ D+ ++ + + V PA+DG+ P Sbjct: 239 LRAGAKHIWLTHICHDMKHEEIDSYVRAYDLRHTDSENRTCRASTVAPAYDGLVLRVP 296 >gi|224135033|ref|XP_002327550.1| predicted protein [Populus trichocarpa] gi|222836104|gb|EEE74525.1| predicted protein [Populus trichocarpa] Length = 314 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 27/290 (9%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGSN 53 +G G S G+PR++ C KNRR + L I G Sbjct: 30 GQSEIIFMGTGTSEGIPRLSCLTNPSNKCPVCSKAVEPGNKNRRLNTGLLICYHGPSG-R 88 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G FY LR + +IDAV+ TH HAD I G+D LR + + I +Y Sbjct: 89 RNILIDVGKFFYHSALRWFPAFGLRTIDAVIITHSHADAIGGLDDLRDWTNNVQPYIPIY 148 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + + ++ Y + ++ P + ++ P+ HG Sbjct: 149 VAERDFEVMKKTHYYLVDTSVVTPGAAVSELQFNLIHEEPFVVN----DLKFTPLPVWHG 204 Query: 170 R-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 SLGFRFGN+ Y +DV+ P E+ L++ + LI+DAL+ S+HF L +++++ Sbjct: 205 HGYRSLGFRFGNICYISDVSEIPEETYPLLKDCELLIMDALRPDRSSSTHFGLPRAIEEV 264 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQFSSPI 270 I P+ + T M +D+D V + V ++DG+ + Sbjct: 265 RKIQPRRTLFTGMMHLMDHDNVNEYLAKLMETEGLNVELSYDGLCVPVTL 314 >gi|306840485|ref|ZP_07473244.1| Beta-lactamase-like protein [Brucella sp. BO2] gi|306289500|gb|EFM60718.1| Beta-lactamase-like protein [Brucella sp. BO2] Length = 195 Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats. Identities = 97/195 (49%), Positives = 129/195 (66%), Gaps = 1/195 (0%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +DA +YTHPHADHIHGID LR Y + R +DVYA L+++F YCF+ +YP Sbjct: 2 LDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYP 61 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 PI++ I + P ++ AGG I P Q HG I SLGFR G+V YCTDV+AFP +SL Sbjct: 62 PILSMHDI-APETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIGSVVYCTDVSAFPEQSL 120 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 +++ D LII AL+ H SHFSL E+L+ IE ++PK AILTHMHV LDY+ V++ TP Sbjct: 121 RYIKDADVLIIGALQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPH 180 Query: 256 RVVPAFDGMQFSSPI 270 V P +DG++F + Sbjct: 181 HVEPGYDGLRFEVAV 195 >gi|73666776|ref|YP_302792.1| Beta-lactamase-like [Ehrlichia canis str. Jake] gi|72393917|gb|AAZ68194.1| Beta-lactamase-like protein [Ehrlichia canis str. Jake] Length = 264 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 129/270 (47%), Gaps = 13/270 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCG+S GVP + C + N+R RSS+ + + ++VDT PD Sbjct: 1 MKVTILGCGSSSGVPVVGCRCDTCSSSLKYNKRMRSSILVESA-----DVQLLVDTTPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q L+ + S+DAVLYTH HADH GI L+ + K I +Y+ + L S Sbjct: 56 RFQALQNNLSSVDAVLYTHFHADHCDGIADLQQFLPKHDVNNIPIYSDITTLCLLTASNS 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV-A 182 Y F + + ++ N + + + I Q HG SS GF F NV A Sbjct: 116 YFFIPSGHASVSKKCS--YLKANVIYYYKEFVVKDFHILAIKQIHGVNSSNGFIFNNVMA 173 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP ES + L LII LK H + L ++ + P+ AILTHM Sbjct: 174 YCTDVKSFPEESWKFLYKKKVLIIGCLKYDASFGHAHVDLCLDWVKELRPEVAILTHMSH 233 Query: 243 DLDY----DMVLKSTPSRVVPAFDGMQFSS 268 DL+Y D + + ++ +DGMQF+ Sbjct: 234 DLEYYSLIDYIKSHSKDNIIVGYDGMQFNI 263 >gi|254500610|ref|ZP_05112761.1| hypothetical protein SADFL11_646 [Labrenzia alexandrii DFL-11] gi|222436681|gb|EEE43360.1| hypothetical protein SADFL11_646 [Labrenzia alexandrii DFL-11] Length = 239 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 91/217 (41%), Positives = 129/217 (59%), Gaps = 1/217 (0%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 TTV++DTGPD Q+L V +DAVLYTH HADH+HGID LR + ++ +R I VY Sbjct: 6 DNDCTTVLIDTGPDLRDQLLGANVQRMDAVLYTHAHADHLHGIDDLRAFMVRDRRRIPVY 65 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 +F YCF+ +YPPI++ + P+ ++ GG IE +P+ HG Sbjct: 66 MDIATFDKAMAAFGYCFETPKGSSYPPILDRHAMTAG-TPVVIEGPGGAIEFLPVEVTHG 124 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 I++LGFR GN AY DV+ ES + L LD LI+D L+ H SHF+L ++L + Sbjct: 125 EINALGFRIGNTAYVPDVSDISRESFDLLTGLDLLILDCLRRNPHPSHFNLDDALSWTKD 184 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + PK+AI T++H DLDY+ + P + PAFDG+Q Sbjct: 185 LAPKHAIFTNLHNDLDYETLKAELPDGIEPAFDGLQV 221 >gi|160882261|ref|ZP_02063264.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] gi|156112350|gb|EDO14095.1| hypothetical protein BACOVA_00207 [Bacteroides ovatus ATCC 8483] Length = 219 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 14/230 (6%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 R+S + + +++D GPDF QVLR ID VL TH H DH+ G+D LR Sbjct: 1 MRASAIVET-----DDARILIDCGPDFRTQVLRLPFEKIDGVLITHEHYDHVGGLDDLRP 55 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + +YA + L YCF D YP + + I ++ + + Sbjct: 56 FCRF--GSVPIYAENYVAQGLRLRMPYCFV---DHRYPGVPD---IPLQEISVGQAFSVN 107 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 E +P+ HGR+ LG+R G + Y TD+ P ES E+L +D L+++AL+ H +H Sbjct: 108 HTEVLPLRVMHGRLPILGYRIGQLGYITDMLTMPEESYEQLAGIDVLVVNALRIATHPTH 167 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQF 266 +L E+L + I K HM D+ + V KS P + AFDG+ Sbjct: 168 QNLEEALAVAQRIQAKKTYFIHMSHDMGLHAEVEKSLPENIHLAFDGLDI 217 >gi|238013670|gb|ACR37870.1| unknown [Zea mays] Length = 374 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 27/285 (9%) Query: 4 YYHFTILGCGASLGVPRITGD------WGACDPT---NPKNRRTRSSLKISRVSERGSNT 54 LG G S G+PR++ C NRR +S+ + + G+ T Sbjct: 91 QSELIFLGTGTSEGIPRVSCLTHPTKICPVCTKAAEPGNPNRRRNTSILLRHATPSGT-T 149 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y Sbjct: 150 NIVVDAGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIYV 209 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 A + + + Y + + P + + +E IP+ HG+ Sbjct: 210 AERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFMVHN----LEVIPLPVWHGQ 265 Query: 171 -ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIE 228 SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ S+HF L +L+++ Sbjct: 266 GYRSLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEVR 325 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V + ++DG++ Sbjct: 326 KIKPKKTLFTGMMHLMDHEKVNSDLARLIGTDGLDIQLSYDGLRI 370 >gi|328948869|ref|YP_004366206.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] gi|328449193|gb|AEB14909.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] Length = 298 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 80/304 (26%), Positives = 135/304 (44%), Gaps = 50/304 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + G G S G+P I C ++P++ R R S + ++VD GP+F Sbjct: 1 MKMILTGTGTSHGIPVIGCGCNVCRSSDPRDNRLRCSAFLESPV------NILVDVGPEF 54 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------------KRPIDVYAA 111 +Q L+ ++ IDAV TH HADH+HGID LR + + + +Y Sbjct: 55 RIQALKYKINKIDAVFITHSHADHLHGIDDLRVFSHTKALDPAHPDNKETEGEGLRIYTT 114 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + F Y F + + P + + EN + G IE +P++ +HG + Sbjct: 115 THAEHDIRHRFDYIFTPMKEGGGKPKIQIMSAENISEKNPLFING--IEILPVMLKHGHL 172 Query: 172 SSLGFRFG---------NVAYCTDVNAFPAESLEKLQN----LDFLIIDALKNGLHSSHF 218 LG F ++AY TD + P S+E ++N L+ L+ID L+ HS+HF Sbjct: 173 DDLGLLFSEKGQDGKKHSIAYLTDCSFVPENSIELVKNNSGILEHLVIDGLRLEPHSTHF 232 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----------------RVVPAFD 262 S ++L+ + +NP+N LTH+ ++ + + S + PA+D Sbjct: 233 SFEQALEAAQKMNPRNVYLTHITHNMSHVQIEDYVKSILWKFPLLKKSAENGFYIGPAYD 292 Query: 263 GMQF 266 G++ Sbjct: 293 GLEL 296 >gi|68171544|ref|ZP_00544922.1| Beta-lactamase-like [Ehrlichia chaffeensis str. Sapulpa] gi|88657965|ref|YP_507772.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999028|gb|EAM85701.1| Beta-lactamase-like [Ehrlichia chaffeensis str. Sapulpa] gi|88599422|gb|ABD44891.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] Length = 263 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 91/270 (33%), Positives = 128/270 (47%), Gaps = 13/270 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGCGAS GVP + C N+R RSS+ + +T ++VDT PD Sbjct: 1 MKITILGCGASGGVPIVGCQCDVCSSNLTYNKRMRSSIFVE-----NGDTQLLVDTTPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 Q L+ + S+DAVLYTH HADH GI L+ + K I +Y+ + + L S Sbjct: 56 RCQALKNNLSSVDAVLYTHFHADHCDGIADLQPFLPKHGLNSIPIYSDINTLCLLTASNS 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + N + + G + I Q HG +S GF F + VA Sbjct: 116 YFFIPSAYTS--AWKKCHYLTVNTIYHYKEFTIGDFCILAIKQLHGVSNSNGFIFNDQVA 173 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP ES + L LI+ LK +H + L I+ P+ AILTHM Sbjct: 174 YCTDVQSFPEESCKFLYKKKVLILGCLKYTASFAHSHVDLCLDWIKEFKPEVAILTHMSH 233 Query: 243 DLDY----DMVLKSTPSRVVPAFDGMQFSS 268 DL+Y D + + +V +DG+Q + Sbjct: 234 DLEYYSLIDYIRSRSQDNIVVGYDGLQLNV 263 >gi|242044492|ref|XP_002460117.1| hypothetical protein SORBIDRAFT_02g023000 [Sorghum bicolor] gi|241923494|gb|EER96638.1| hypothetical protein SORBIDRAFT_02g023000 [Sorghum bicolor] Length = 376 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 29/286 (10%) Query: 4 YYHFTILGCGASLGVPRITG------DWGAC----DPTNPKNRRTRSSLKISRVSERGSN 53 LG G S G+PR++ C +P NP NRR +S+ + + G+ Sbjct: 93 QSELIFLGTGTSEGIPRVSCLTHPTKTCPVCSKAAEPGNP-NRRRNTSILLRHATPSGT- 150 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T ++VD G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y Sbjct: 151 TNIVVDAGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIY 210 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + + + Y + + P + + +E IP+ HG Sbjct: 211 VAERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFMVHN----LEVIPLPVWHG 266 Query: 170 R-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKI 227 + SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ S+HF L +L+++ Sbjct: 267 QGYRSLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEV 326 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I PK + T M +D++ V + ++DG+ Sbjct: 327 RKIKPKKTLFTGMMHLMDHEKVNSDLARLMETEGLDIQLSYDGLSI 372 >gi|226505330|ref|NP_001143802.1| hypothetical protein LOC100276574 [Zea mays] gi|195627382|gb|ACG35521.1| hypothetical protein [Zea mays] Length = 374 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 27/285 (9%) Query: 4 YYHFTILGCGASLGVPRITGD------WGACDPT---NPKNRRTRSSLKISRVSERGSNT 54 LG G S G+PR++ C NRR +S+ + + G+ T Sbjct: 91 QSELIFLGTGTSEGIPRVSCLTHPTKICPVCTKAAEPGNPNRRRNTSILLRHATPSGT-T 149 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G FY L+ + +ID V+ TH HAD I G+D LR + + I +Y Sbjct: 150 NIVVDAGKFFYHSALQWFPTFGLRTIDGVIITHSHADAIGGLDCLRDWTNNVQSSIPIYV 209 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 A + + + Y + + P + + +E IP+ HG+ Sbjct: 210 AERDYEVMKMTHYYLVDTSVVIPGAAVSALQFNIIKEEPFMVHN----LEVIPLPVWHGQ 265 Query: 171 -ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIE 228 SLGFRFG+V Y +DV+ P E+ + L+N + LI+DAL+ S+HF L +L+++ Sbjct: 266 GYRSLGFRFGDVCYISDVSDIPEETYKLLENCELLIMDALRPDRSSSTHFGLPRALEEVR 325 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 I P + T M +D++ V + ++DG++ Sbjct: 326 KIKPTKTLFTGMMHLMDHEKVNSDLARLIGTDGLDIQLSYDGLRI 370 >gi|304321767|ref|YP_003855410.1| putative hydrolase [Parvularcula bermudensis HTCC2503] gi|303300669|gb|ADM10268.1| possible hydrolase [Parvularcula bermudensis HTCC2503] Length = 240 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 8/232 (3%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G TTV++DT PD Q+L V +D V TH HAD HGID LRG + + Sbjct: 6 DTNGWEGELTTVLIDTSPDLREQLLGAAVNHLDGVFITHDHADQTHGIDDLRGLVYRNGK 65 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V+ + +L + F YCF++ YP I++ I P+ + G I Sbjct: 66 RVPVHFSDQTAPNLMQRFAYCFQSSAKTGYPAILDSHRIAPG-APVTVSGPSGDIVVEAA 124 Query: 165 LQQHGRISSLGFRF-------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 L HGR+ + G++ G +AY D N P ++ +D ++DAL+ H SH Sbjct: 125 LLDHGRVPAFGYKLSVPEQAQGGIAYSPDTNGVPDTAMALFTGVDVWVVDALRREPHPSH 184 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 L+ +L+ + + +LT++H+DLDY+ + P VVPA+DG+ P Sbjct: 185 AHLAMALEWLVRADASRGVLTNLHIDLDYEELAAELPENVVPAYDGLCIEVP 236 >gi|57238878|ref|YP_180014.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] gi|58578807|ref|YP_197019.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] gi|57160957|emb|CAH57863.1| hypothetical protein Erum1470 [Ehrlichia ruminantium str. Welgevonden] gi|58417433|emb|CAI26637.1| PhnP protein [Ehrlichia ruminantium str. Welgevonden] Length = 262 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 14/268 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G+S GVP I D AC N+RTR+S + T ++VDT PD Sbjct: 1 MKITILGSGSSSGVPIIGCDCSACKSHLQYNKRTRASALFE-----NNGTKLLVDTTPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 +Q L+ + S+D +LYTH H+DH GI L+ + + + +Y+ + L S Sbjct: 56 RIQALQHNLSSVDGILYTHFHSDHCDGISDLQPFVPTNELNTVHIYSDVMTLCSLVASNS 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + N + + G + I Q HG GF F N VA Sbjct: 116 YFFIRGIVSKWK---KCHYLTPNIMYYYQEYNIGSFRILMIKQDHGVADCNGFIFNNQVA 172 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP +S + L + LI+ LK +H S++ L+ + + P+ I THM Sbjct: 173 YCTDVKSFPKKSFDLLYKIKVLILGCLKYEESFAHSSVNTCLEWVAELKPETTIFTHMSH 232 Query: 243 DLDY----DMVLKSTPSRVVPAFDGMQF 266 DL+Y D + + V+ +DG+QF Sbjct: 233 DLEYYSLIDYIKSRIDANVIVGYDGLQF 260 >gi|218202019|gb|EEC84446.1| hypothetical protein OsI_31065 [Oryza sativa Indica Group] gi|222641433|gb|EEE69565.1| hypothetical protein OsJ_29077 [Oryza sativa Japonica Group] Length = 365 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 33/283 (11%) Query: 2 KDYYHFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKISRVSERGS 52 + LG G S G+PR++ C +NRR +S+ + + G+ Sbjct: 94 RQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVCTKAAEPGNRNRRRNTSILLRHATPSGT 153 Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G + +IDAV+ TH HAD I G+D LR + + I +Y A Sbjct: 154 -ANILIDAGK----------LRTIDAVIITHSHADAIGGLDCLRDWTNNVQPTIPIYVAE 202 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-I 171 + + + Y + + P + + +E IP+ HG+ Sbjct: 203 RDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFTVHN----LEVIPLPVWHGQGY 258 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELI 230 SLGFRFG V Y +DV+ P E+ + L++ + LI+DAL+ S+HF L +L+++ I Sbjct: 259 RSLGFRFGRVCYISDVSDIPKETYKLLEDCELLIMDALRPDRSSSTHFGLPRALEEVRKI 318 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 PK + T M +D++ V + ++DG++ Sbjct: 319 KPKKTLFTGMMHLMDHEKVNNELAKLMETEGLDIQLSYDGLRV 361 >gi|189462600|ref|ZP_03011385.1| hypothetical protein BACCOP_03290 [Bacteroides coprocola DSM 17136] gi|189430761|gb|EDU99745.1| hypothetical protein BACCOP_03290 [Bacteroides coprocola DSM 17136] Length = 217 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 102/218 (46%), Gaps = 5/218 (2%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D GPDF Q +R ID VL TH H DH+ G+D LR + R + VYA Sbjct: 2 EGVRILIDCGPDFREQCIRMNDFRPIDGVLITHEHYDHVGGLDDLRPFC--SFRDVPVYA 59 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L YCF P + VIE + +E +P HG+ Sbjct: 60 EGYTAERLQRRMPYCFVEHP-YPGVPSIPLSVIEPYKPFQVTNLSRHSLEVVPFRVMHGK 118 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 + LG+R G VA+ TD+ P ES E LQ LD+L I+AL+ H +H SL+E+L++ I Sbjct: 119 LPILGYRVGKVAWITDMLTMPDESYEFLQGLDYLFINALRIEPHWTHQSLAEALEQASRI 178 Query: 231 NPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFS 267 HM + + V K P V A+DG+ Sbjct: 179 GAGETYFIHMSHHMGLHAEVEKQLPPHVHMAYDGLVVE 216 >gi|58616866|ref|YP_196065.1| PhnP protein [Ehrlichia ruminantium str. Gardel] gi|58416478|emb|CAI27591.1| PhnP protein [Ehrlichia ruminantium str. Gardel] Length = 262 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 14/268 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G+S GVP I D AC N+RTR+S + T ++VDT PD Sbjct: 1 MKITILGSGSSSGVPIIGCDCSACKSHLQYNKRTRASALFE-----NNGTKLLVDTTPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 +Q L+ + S+D +LYTH H+DH GI L+ + + + +Y+ + L S Sbjct: 56 RIQALQHNLSSVDGILYTHFHSDHCDGISDLQPFVPTNELNTVHIYSDVMTLCSLVASNS 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VA 182 Y F + + N + + G + I Q HG GF F N VA Sbjct: 116 YFFIRGIVSKWK---KCHYLTPNIMYYYQEYNIGNFRILMIKQDHGVADCNGFIFNNQVA 172 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 YCTDV +FP +S + L + LI+ LK +H S++ L+ + + P+ I THM Sbjct: 173 YCTDVKSFPKKSFDLLYKIKVLILGCLKYEESFAHSSVNTCLEWVAELKPETTIFTHMSH 232 Query: 243 DLDY----DMVLKSTPSRVVPAFDGMQF 266 DL+Y D + + V+ +DG+QF Sbjct: 233 DLEYYSLIDYIKSRIDANVIVGYDGLQF 260 >gi|254442283|ref|ZP_05055759.1| hypothetical protein VDG1235_516 [Verrucomicrobiae bacterium DG1235] gi|198256591|gb|EDY80899.1| hypothetical protein VDG1235_516 [Verrucomicrobiae bacterium DG1235] Length = 260 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 20/272 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +G G S GVP I D C +P+N R R+ + + + +D P+F Sbjct: 1 MKIRFMGTGTSQGVPMIGCDCAVCCSEDPRNTRFRTHVHVEM-----GGLNIQIDAAPEF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 ++ L + +D L TH HADHI G D LR Y L++ I VY++ + ++ L E + Sbjct: 56 RLRALEMGIPKVDLALLTHGHADHIQGFDDLRQYCELRRGEAIPVYSSEEGLRRLREIYP 115 Query: 124 YCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 Y + + YP ++ D+ G + + Q HGR +LGF F Sbjct: 116 YAMRDKAAIKGYPAFRGELMPRVLDL-----GEAGRVYST--RQAHGRFETLGFVFEESV 168 Query: 180 ---NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 Y TD ++ AE+ E + D +++D L+ H SH ++ E+ + I + Sbjct: 169 SGRRFVYYTDCSSVSAEAEELARGADLVVLDGLRPMDHPSHMTVGEAAEAASRIGGGQSY 228 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 L HM +D+ +V P V ++DG+ Sbjct: 229 LIHMTHHIDHGIVDTELPDGVNLSYDGLVVEV 260 >gi|88608665|ref|YP_506461.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600834|gb|ABD46302.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] Length = 264 Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 125/271 (46%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGCG S GVP + C +NP + RTR S+ + S T +++D PD Sbjct: 1 MKITVLGCGNSSGVPVLGCACSVCLSSNPLDTRTRCSVFVETAS-----TRLLIDASPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q +RE S+D V YTH H DH G L + + I V++ + H+ + Y Sbjct: 56 RAQAMREGFSSVDQVFYTHIHFDHHAGTHELSSFATSEGNCIHVFSDEFTISHIESLYGY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAY 183 FK + + VP + A G + + Q HG I+S G G AY Sbjct: 116 LFKPEHLSN--AMWKRCYLSAKVVPYYEEFAVGDMLCMIFPQTHGSINSCGIILNGKFAY 173 Query: 184 CTDVNAFPAESLEKLQNLDF--LIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 CTDV P +L+ +++L+ II+ +H + SE+L+ I LI PK+A THM Sbjct: 174 CTDVRLIPDRALDIMKSLELEVFIIECFDYQSSYAHSNFSEALEYINLIQPKSAFFTHMT 233 Query: 242 VDLDYDMVLKSTP----SRVVPAFDGMQFSS 268 L YD +L S V+PA DG+ Sbjct: 234 HKLAYDDLLTRLKVSGVSHVMPAHDGLSLEI 264 >gi|294054974|ref|YP_003548632.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] gi|293614307|gb|ADE54462.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] Length = 259 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 124/272 (45%), Gaps = 21/272 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S GVP I CD NPKN RTR S+ + + VD +F Sbjct: 1 MELIFLGTGTSQGVPMIAQPESGCDMNNPKNWRTRCSIHVEL-----GGHHIQVDAAQEF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 +Q L + ID + THPHADHI G+D LR + L + VY++P ++ + E F Sbjct: 56 RIQCLNSGIDQIDTFMLTHPHADHILGMDDLRRFCDLNGGAALPVYSSPMGLRRVQEIFP 115 Query: 124 YCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 Y + R YP +++P ++ GG++E+ + HG + LG F Sbjct: 116 YAIRDKPVVRGYPA------FSLHEMPKELELPGGLVES--VYLPHGPMEVLGLVFTEND 167 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 +AY TD E+ + D +++D L+ H SH ++ E+ + + + Sbjct: 168 TGKKLAYFTDCKEVGEEARLIAEGADVVVLDGLRPEPHPSHMTIGEATQTALEMGAPVSF 227 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LTHM +D++ P + A+DG++ S Sbjct: 228 LTHMTYLVDHESTEAQLPENIHLAYDGLRVSW 259 >gi|83858304|ref|ZP_00951826.1| hypothetical protein OA2633_02356 [Oceanicaulis alexandrii HTCC2633] gi|83853127|gb|EAP90979.1| hypothetical protein OA2633_02356 [Oceanicaulis alexandrii HTCC2633] Length = 242 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 1/216 (0%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 G T +++DT PD Q+L V SID V +TH HAD HGID +R + ++ +D Sbjct: 13 GEATRLLIDTSPDLREQMLSAGVTSIDGVAFTHAHADQAHGIDDVRAFVYRRGARLDAMM 72 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L F Y F+ + YPP++ +E + GG IE HGR Sbjct: 73 NSQTQSLLRARFGYIFETPEGSGYPPLMRDHGLEAGQTA-SIDGPGGKIELSLFDVVHGR 131 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 G R G +AY DVN ++++ L I+DAL++ H SH ++ +L + I Sbjct: 132 EPCSGVRIGPLAYTPDVNGLDQKAMQALSGTSLWIVDALRDKPHPSHAHVNLALDWLSQI 191 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 P+ +LT++H+DLDY +L+ P V PA+DG+Q Sbjct: 192 KPRLGVLTNLHIDLDYKDLLERLPEGVRPAYDGLQI 227 >gi|167751926|ref|ZP_02424053.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] gi|167660167|gb|EDS04297.1| hypothetical protein ALIPUT_00168 [Alistipes putredinis DSM 17216] Length = 222 Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 11/224 (4%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL---KQKRPI 106 + +++D GPDF Q+LR V IDA+L TH H DHI G+D +R + I Sbjct: 3 EWDDIRLVIDAGPDFRYQMLRTGVRHIDAILLTHEHKDHIGGLDDVRAFNFVDYPTIHRI 62 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DV+ +K + + F Y F R P IE ++ + E IP+ Sbjct: 63 DVFGTRQTLKCVRKDFDYAFSVDKYRGVP------EIELCEIDPAVPFCVKDKEVIPVSG 116 Query: 167 QHG-RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 H R GFRFG +AY TD KL ++ L+++AL+ H SHFSL E+L Sbjct: 117 HHSPRFEVTGFRFGELAYLTDFKTIAPAEERKLYGVEVLVVNALRPQPHDSHFSLDEALA 176 Query: 226 KIELINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 I + P+ A LTHM ++ Y P V A+DG++ + Sbjct: 177 LIRRVAPRRAYLTHMSHEMGLYAERSALLPEGVYLAYDGLEINV 220 >gi|254796934|ref|YP_003081771.1| metallo-beta-lactamase family protein [Neorickettsia risticii str. Illinois] gi|254590182|gb|ACT69544.1| metallo-beta-lactamase family protein [Neorickettsia risticii str. Illinois] Length = 264 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 82/271 (30%), Positives = 125/271 (46%), Gaps = 14/271 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGCG S GVP + C +NP + RTR S+ + S T +++D PD Sbjct: 1 MRVTVLGCGNSSGVPVLGCACSVCLSSNPLDTRTRCSVLVETSS-----TRLLIDASPDL 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q +RE S+D V YTH H DH G L + + I V++ + H+ + Y Sbjct: 56 RAQAMREGFSSVDQVFYTHIHFDHHAGTHELSSFATSEGNCIHVFSDEFTISHMENLYGY 115 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAY 183 FK + + + VP + A G + + Q HG I+S G G AY Sbjct: 116 LFKPEHLSN--AMWKRCYLSASVVPYYEEFAVGDMLCMIFPQTHGNINSCGIILNGKFAY 173 Query: 184 CTDVNAFPAESLEKLQNLDF--LIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 CTDV P +L+ +++L+ +I+ +H + E+L+ I L+ PK+A THM Sbjct: 174 CTDVRLIPNRALDIMKSLELEVFVIECFDYEGSYAHSNFVEALEYINLVRPKSAFFTHMT 233 Query: 242 VDLDYDMVLKSTP----SRVVPAFDGMQFSS 268 L YD ++ S V+PA DG+ Sbjct: 234 HKLAYDDLVTRLKVSGVSHVMPAHDGLFLEI 264 >gi|46202672|ref|ZP_00208611.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 218 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 118/218 (54%), Gaps = 10/218 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +T ++VDT PD Q+L V S+DAV+YTH HADH+HGID LR ++ + V+ Sbjct: 4 GDTRILVDTSPDLRDQLLAAGVKSVDAVVYTHDHADHLHGIDDLREINRATRKWLPVWGD 63 Query: 112 PDCMKHLFESFRYCFKALDDRT---YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + F Y F+ L++ Y P++ I G I+ IP Q H Sbjct: 64 AGTLATARSRFPYAFEPLEEMGEMIYRPLLEAHEISG-------PFRIGNIDVIPFDQDH 116 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 G +LG RFG++AY TDV P E+ + L+ +D II L + H +H ++++L+ I+ Sbjct: 117 GYCRTLGLRFGSMAYSTDVVEMPPEAFKALKGVDTWIIGCLVDYPHQTHAHIAKALEWID 176 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + P+ A +THM LDY+ V ++ P V+PA DG+ Sbjct: 177 CVKPRRAYITHMGSRLDYEAVRRAVPPHVIPAHDGLVI 214 >gi|224535484|ref|ZP_03676023.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] gi|224522898|gb|EEF92003.1| hypothetical protein BACCELL_00347 [Bacteroides cellulosilyticus DSM 14838] Length = 215 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 11/220 (5%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D GPDF Q+LR ID VL TH H DH+ G+D LR + I +Y+ Sbjct: 4 DDAVILIDCGPDFREQMLRVASFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GEIPIYS 61 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 HL YCF + YP + + +V E IP HGR Sbjct: 62 DDYTATHLRARMPYCF---LEHKYPGVPQIFL---QEVEPGKNFFINHTEIIPFQVMHGR 115 Query: 171 ISSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 + LG+R G +AY TD+ P ES E+LQ+LD L+++AL+ H +H S+SE+L+ + Sbjct: 116 LPILGYRIGKRLAYITDMLTMPEESYEQLQDLDVLVVNALRVKPHPTHQSISEALETAKR 175 Query: 230 INPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 I + HM + + K P V FDGM+ Sbjct: 176 IGARETYFIHMSHHAGLHVELEKQLPPDVHLTFDGMEIEF 215 >gi|123975995|ref|XP_001314411.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121896724|gb|EAY01867.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 268 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 18/248 (7%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G S G+P + D C T+P+++R R+ + + + V++D G D Sbjct: 8 TIDLTLLGTGTSGGIPFVNCDCPTCTSTDPRDKRYRTCGIL----KISNGKNVLIDCGTD 63 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +LRE + I+ ++ +H HADH+HG+ L ++ PI +Y C K L + Sbjct: 64 IRKCLLREGITHIEGIIISHCHADHVHGLPDLVKFY--NGHPIPIYCNDVCGKQLKGKYS 121 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 + D + + P + + P+ HG++ G+RFGN Y Sbjct: 122 TLVEGDDRK--------FDVNITTSPFKL----CDVTFTPVPIMHGKLPIFGYRFGNATY 169 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 TD P +S + + + L+I+ L N H +H S +SL +I I PK A L HM Sbjct: 170 ITDCKTIPNDSYKIIDGSEILVINTLANTDHETHLSYEQSLAEIRKIKPKVAYLVHMTHT 229 Query: 244 LDYDMVLK 251 +++ + Sbjct: 230 HNHEFIQN 237 >gi|218259902|ref|ZP_03475427.1| hypothetical protein PRABACTJOHN_01086 [Parabacteroides johnsonii DSM 18315] gi|218224847|gb|EEC97497.1| hypothetical protein PRABACTJOHN_01086 [Parabacteroides johnsonii DSM 18315] Length = 200 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDF QV+R + +DAVL +H H DH+ G+D LR + ++ +DVYA + + + Sbjct: 1 GPDFRWQVIRNKTYHLDAVLISHEHYDHVGGLDDLRPFCREKG--VDVYAEDNVAEAIET 58 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Y F+ YP + N + + P + I P+ HG++ G+R GN Sbjct: 59 RIPYVFRT---HKYPGVPNLELHRIGNEPFMVAG----IPVTPVRVMHGKLPIFGYRIGN 111 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +AY TDV P E KL+ LD L++ AL+ G H +H SL E+L +E I PK L HM Sbjct: 112 MAYLTDVKYLPEEEYAKLEGLDVLVLTALRLGAHPTHESLEEALANVERIKPKETYLIHM 171 Query: 241 HVDLD-YDMVLKSTPSRVVPAFDGMQFS 267 + + V K P V A+DG+ S Sbjct: 172 SHRIGLHAEVEKELPPHVHLAYDGLHVS 199 >gi|224026015|ref|ZP_03644381.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] gi|224019251|gb|EEF77249.1| hypothetical protein BACCOPRO_02768 [Bacteroides coprophilus DSM 18228] Length = 220 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 5/217 (2%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D GPDF Q++R + IDAVL TH H DH+ G+D LR + I VYA Sbjct: 5 NGVRILIDCGPDFREQMIRMDDYRPIDAVLITHEHYDHVGGLDDLRPFCRF--GDIPVYA 62 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L YCF + P + VIE S G +E +P HG+ Sbjct: 63 EAYTADRLQARIPYCF-TENLYPGVPHIPLHVIEAGKPFTVSNSYGHSVEILPFRVMHGK 121 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 + +G+R G +A+ TD+ PA S L+NLD L+I+AL+ H +H ++ E+L +I I Sbjct: 122 LPIMGYRIGEMAWITDMLTMPAASYACLKNLDCLVINALRQEQHPTHQTVREALAQISCI 181 Query: 231 NPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQF 266 P+ A L H + + V K P V +DGM Sbjct: 182 QPEEAFLIHASHQIGLHAEVEKELPPHVHLTYDGMVI 218 >gi|189467076|ref|ZP_03015861.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] gi|189435340|gb|EDV04325.1| hypothetical protein BACINT_03459 [Bacteroides intestinalis DSM 17393] Length = 215 Score = 235 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 11/220 (5%) Query: 52 SNTTVIVDTGPDFYMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D GPDF Q+L ID VL TH H DH+ G+D LR + I +Y+ Sbjct: 4 DDAVILIDCGPDFREQMLHAASFEKIDGVLITHEHYDHVGGLDDLRPFCRF--GEIPIYS 61 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 HL YCF + YP + + +V E P+ HGR Sbjct: 62 DEYTATHLRARMPYCF---LEHKYPGVPQIFL---QEVEAGKTFFINNTEITPLQVMHGR 115 Query: 171 ISSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 + LG+R G +AY TD+ P ES E+L +LD L+++AL+ H +H S+SE+L+ + Sbjct: 116 LPILGYRIGKRMAYITDMLTMPEESYEQLHDLDVLVVNALRVKPHPTHQSISEALETAKR 175 Query: 230 INPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 I + HM + + K P V FDGM+ Sbjct: 176 IGARETYFIHMSHHAGLHVELEKQLPPDVHLTFDGMEIEF 215 >gi|329961130|ref|ZP_08299385.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328532068|gb|EGF58878.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 215 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 104/218 (47%), Gaps = 11/218 (5%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D GPDF Q+LR ID VL TH H DH G+D LR + I VY+ Sbjct: 4 DDAVILIDCGPDFREQMLRMSSFEKIDGVLITHEHYDHAGGLDDLRPFCRF--GEIPVYS 61 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 HL YCF D+ YP + + +V E +P+ HGR Sbjct: 62 DAYTAGHLRARMPYCFV---DKVYPGVPRIYL---QEVEAGKPFYINRTEILPLQVMHGR 115 Query: 171 ISSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 + LG+R G + Y TD+ P ES E+L+ LD L+I+AL+ H++H S+SE+L E Sbjct: 116 LPILGYRIGGRLGYITDMLTMPEESYEQLKGLDVLVINALRLQPHATHQSISEALVAAER 175 Query: 230 INPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQF 266 I K HM + + K P + A+DG + Sbjct: 176 IGAKETYFIHMSHHAGLHVELSKQLPPHIYLAYDGQEI 213 >gi|301166590|emb|CBW26166.1| putative hydrolase [Bacteriovorax marinus SJ] Length = 271 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 121/270 (44%), Gaps = 16/270 (5%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 TILG G S G+P + D C T +N R R+S+ + ++++DT PD Sbjct: 7 KMTILGSGTSTGIPMVGCDCAVCTSTVKENTRLRTSVYLETAQAS----SILIDTTPDLR 62 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRY 124 Q+L+ ++ +D TH HADH HGID LR K I +Y C L + F Y Sbjct: 63 HQLLKNKINKVDFAFITHDHADHTHGIDDLRPLTFAPKYTSIPIYTYKKCAAQLTQKFPY 122 Query: 125 CF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 F K L I N ++E V + + G + HG +LG +A Sbjct: 123 IFKAKQLPANIGGGIPNLQLME---VDLSGQQKIGAELFEFTMLDHGYTQTLGIIHQKMA 179 Query: 183 YCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Y D + +E +E L+ L+ LIID + N H +H + + I I PK A L HM Sbjct: 180 YIIDCHQLSSEQIEDLRKRELELLIIDCVTNHEHKTHLWQERTFEYISQIAPKRAGLIHM 239 Query: 241 HVDLDYDMVLKSTPS----RVVPAFDGMQF 266 + L+++ + K + V P +DG Sbjct: 240 NHALEHEQLKKDAAASFSFEVFPTYDGQVL 269 >gi|302770615|ref|XP_002968726.1| hypothetical protein SELMODRAFT_145906 [Selaginella moellendorffii] gi|300163231|gb|EFJ29842.1| hypothetical protein SELMODRAFT_145906 [Selaginella moellendorffii] Length = 317 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 +D +LG G+S GVP C P KN R SL I + Sbjct: 10 RDGSELIVLGSGSSTGVPSPVCLLRPSDPPCAVCHKAIALPPQINKNYRCNPSLLIKFLH 69 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 G + +D G F QVLR +V +DA+L TH HAD + G+D +RG L Sbjct: 70 GDGELRFIQIDAGKHFKEQVLRWYLPNKVPRLDAILLTHEHADAMLGLDEIRGVQPYNSL 129 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +P+ + + + M + E F Y + + R + IV + D P ++ Sbjct: 130 NRIKPLSCFLSQETMNSVAEKFPYLVQKGVKEGQEIRRVTQLNYKIVQTSCDAPFDVEG- 188 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQN-----LDFLII 206 +E P+ HG LGF FG VAY +DV+ E+ + + +D L + Sbjct: 189 ---LEFTPLPVMHGEDYPCLGFLFGRKSRVAYISDVSRILPETEQLISQESGGQVDLLFL 245 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVV 258 D L K H++HF +SL+ ++ I PK A+ M + D+++ + + V Sbjct: 246 DTLYKKDKHNTHFCFPQSLEAVKRIRPKRALFVGMTHEFDHELDNEFLANWSKIEGIDVR 305 Query: 259 PAFDGMQFSSPI 270 A+DG++ + Sbjct: 306 LAYDGLRIPIDL 317 >gi|311747666|ref|ZP_07721451.1| lipoate-protein ligase B [Algoriphagus sp. PR1] gi|311302689|gb|EAZ79963.2| lipoate-protein ligase B [Algoriphagus sp. PR1] Length = 196 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +LR + +D VL+TH H DH G+D +R + Q++ + ++ ++ + F Y F Sbjct: 1 MLRAGIKRLDGVLFTHEHKDHTAGLDDIRPFNFAQQKDMPIFGRQQVLEQIKREFAYVFS 60 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + + YP + +E + ++ I+ PI H ++ LGFR G+ Y TD Sbjct: 61 S---KKYPGVPQIDPVEITEKAFSIEG----IQITPIPVLHYKLPVLGFRIGDFTYITDT 113 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-Y 246 N P ESL+ ++ L+++AL+ H SHF+L E++ + I + LTH+ L Sbjct: 114 NHIPEESLKLIEGTKVLVLNALQKTPHISHFTLEEAVDMAQKIGAETTYLTHISHKLGLQ 173 Query: 247 DMVLKSTPSRVVPAFDGMQFSSP 269 + + + PS + A+DG+Q + P Sbjct: 174 EEIDQELPSGISLAYDGLQVTLP 196 >gi|226509254|ref|NP_001140959.1| hypothetical protein LOC100273038 [Zea mays] gi|194701942|gb|ACF85055.1| unknown [Zea mays] gi|195620596|gb|ACG32128.1| hydrolase-like protein [Zea mays] Length = 328 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 45/305 (14%) Query: 4 YYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSER 50 LG G S VP C P N R +SL I + Sbjct: 23 SSSLVFLGTGCSSAVPNARCLIQPPDPPCPVCSQSLSVPPELNPNYRCNTSLLIDYCQDE 82 Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYF----LKQ 102 ++ +I+D G F QVLR V +D++L TH HAD I G+D +R Sbjct: 83 RAHKYIIIDVGKTFREQVLRWFVRHKIPCVDSILLTHEHADAILGLDDVRVVQPFSPTND 142 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGV 158 P +Y + M + + F Y K ++ + +IE +D+ ++G Sbjct: 143 IDPTPIYLSQFAMDSICQKFPYLVKKKLKEGEEVRRVAQLEWKIIE-SDIQKPFTTSG-- 199 Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL 209 +E +P+ HG LGF FG VAY +DV+ FP + + LD LI+D L Sbjct: 200 LEFVPLPVIHGEDYICLGFLFGRKSKVAYISDVSRFPPSTEYAISKSGGGQLDLLILDCL 259 Query: 210 -KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAF 261 + G H+ H ++L + I PK A+L M ++D+ ++ V A Sbjct: 260 YRTGSHNVHLCWDQTLDAVRRICPKRALLIGMTHEMDHHKDNQTLEEWSRREGIDVQLAR 319 Query: 262 DGMQF 266 DG++ Sbjct: 320 DGLRV 324 >gi|302817877|ref|XP_002990613.1| hypothetical protein SELMODRAFT_429046 [Selaginella moellendorffii] gi|300141535|gb|EFJ08245.1| hypothetical protein SELMODRAFT_429046 [Selaginella moellendorffii] Length = 316 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 +D +LG G+S GVP C P KN R+ SL I + Sbjct: 9 RDGSELIVLGSGSSTGVPSPVCLLRPSDPPCAVCHKAIALPPQINKNYRSNPSLLIKFLH 68 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 G + +D G F QVLR +V +DA+L TH HAD + G+D +RG L Sbjct: 69 GDGELRFIQIDAGKHFKEQVLRWYLPNKVPRLDAILLTHEHADAMLGLDEIRGVQPYDSL 128 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +P+ + + + M + E F Y + + R + IV + D P ++ Sbjct: 129 NRIKPLSCFLSQETMDSVAEKFPYLVQKGVKEGQEIRRVTQLNYKIVQTSCDAPFDVEG- 187 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQN-----LDFLII 206 +E P+ HG LGF FG VAY +DV+ E+ + + +D L + Sbjct: 188 ---LEFTPLPVMHGEDYLCLGFLFGRKSRVAYISDVSRILPETEQLISQESGGQVDLLFL 244 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVV 258 D L K H++HF +SL+ ++ I PK A+ M + D+++ + + V Sbjct: 245 DTLYKKDKHNTHFCFPQSLEAVKRIRPKRALFVGMTHEFDHELDNEFLANWSKTEGIDVR 304 Query: 259 PAFDGMQFSSPI 270 A+DG++ + Sbjct: 305 LAYDGLRIPIDL 316 >gi|297740764|emb|CBI30946.3| unnamed protein product [Vitis vinifera] Length = 406 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 47/310 (15%) Query: 4 YYHFTILGCGASLGVPRITG-------DWGAC------DPTNPKNRRTRSSLKISRVSER 50 +LG G S VP C P N R +SL I Sbjct: 101 RSSLILLGTGCSSVVPNAMCLIQPSDPPCNVCFQSLSLPPERNPNYRCNTSLLIDYCQNN 160 Query: 51 GSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQ 102 G + +++D G F QV+R ++ +D+++ TH HAD + G+D +R Sbjct: 161 GEHKYILIDVGKTFREQVIRWFTFYKIPQVDSIILTHEHADAVLGLDDMRAVQPFSPTND 220 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 P VY + M+ + F Y K + R + I+ N++ P Sbjct: 221 ISPTPVYLSQYAMESIATKFPYLVKKKLKEGQELRRVAQLDWKIIESNHEKPFVASG--- 277 Query: 158 VIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDA 208 ++ +P+ HG LGF FG VAY +D++ FP+ + + LD LI+D Sbjct: 278 -LQFVPLPVMHGEDYLCLGFLFGEKCKVAYISDISRFPSSTEYVISKNGGGQLDLLILDT 336 Query: 209 L-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPA 260 L K G H++HF ++L+ ++ I PK A+L M + D+ ++ V A Sbjct: 337 LYKKGSHNTHFCFPQTLEAVKRICPKRALLVGMTHEFDHHKDNETLMEWSRREGIPVQLA 396 Query: 261 FDGMQFSSPI 270 DG++ + Sbjct: 397 HDGLRVPIDL 406 >gi|89898551|ref|YP_515661.1| beta-lactamase superfamily metal dependent hydrolase [Chlamydophila felis Fe/C-56] gi|89331923|dbj|BAE81516.1| metal dependent hydrolase of the beta-lactamase superfamily I [Chlamydophila felis Fe/C-56] Length = 271 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 22/273 (8%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G G+P C + +R R S+ + + ++D GPDF Sbjct: 13 KLTFLGSGNPEGIPVAFCSCAVCT--GKQIQRLRPSVLVE-----WAEKKFLIDVGPDFR 65 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + +D V THPH DHI GID LR +++ +R + V + K+L +S + Sbjct: 66 QQMLENNIQKLDGVFLTHPHYDHIGGIDDLRVWYVLHQRSLPVVLSAFTYKYLCKSREHI 125 Query: 126 -FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F D + ++ ++ +S + + +G+RFGN+AY Sbjct: 126 VFPQGGDSSLSASLDFTILNEE----YGESTFLDLPYTYVSYYQKSCEVMGYRFGNLAYL 181 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLH-------SSHFSLSESLKKIELINPKNAIL 237 TD+N + E L ++ LI+ A N +HF++S++ + K I+ Sbjct: 182 TDMNRYDQEIFSYLSGVETLILSASPNQPPAAFSGRGYAHFTMSQAEDFASYVGAKKLII 241 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 TH+ +L ++ S + A+DGM+ S + Sbjct: 242 THISHNLQKELADY---SDKLCAYDGMEVSWSL 271 >gi|225443948|ref|XP_002279654.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 325 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 47/310 (15%) Query: 4 YYHFTILGCGASLGVPRITG-------DWGAC------DPTNPKNRRTRSSLKISRVSER 50 +LG G S VP C P N R +SL I Sbjct: 20 RSSLILLGTGCSSVVPNAMCLIQPSDPPCNVCFQSLSLPPERNPNYRCNTSLLIDYCQNN 79 Query: 51 GSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQ 102 G + +++D G F QV+R ++ +D+++ TH HAD + G+D +R Sbjct: 80 GEHKYILIDVGKTFREQVIRWFTFYKIPQVDSIILTHEHADAVLGLDDMRAVQPFSPTND 139 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 P VY + M+ + F Y K + R + I+ N++ P Sbjct: 140 ISPTPVYLSQYAMESIATKFPYLVKKKLKEGQELRRVAQLDWKIIESNHEKPFVASG--- 196 Query: 158 VIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDA 208 ++ +P+ HG LGF FG VAY +D++ FP+ + + LD LI+D Sbjct: 197 -LQFVPLPVMHGEDYLCLGFLFGEKCKVAYISDISRFPSSTEYVISKNGGGQLDLLILDT 255 Query: 209 L-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPA 260 L K G H++HF ++L+ ++ I PK A+L M + D+ ++ V A Sbjct: 256 LYKKGSHNTHFCFPQTLEAVKRICPKRALLVGMTHEFDHHKDNETLMEWSRREGIPVQLA 315 Query: 261 FDGMQFSSPI 270 DG++ + Sbjct: 316 HDGLRVPIDL 325 >gi|242086278|ref|XP_002443564.1| hypothetical protein SORBIDRAFT_08g021620 [Sorghum bicolor] gi|241944257|gb|EES17402.1| hypothetical protein SORBIDRAFT_08g021620 [Sorghum bicolor] Length = 326 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 81/305 (26%), Positives = 126/305 (41%), Gaps = 45/305 (14%) Query: 4 YYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSER 50 LG G S VP C P N R +SL I + Sbjct: 21 SSSLVFLGTGCSSAVPNARCLIQPPDPPCSVCSQSLSVPPELNPNYRCNTSLLIDYCQDE 80 Query: 51 GSNTTVIVDTGPDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYF----LKQ 102 G++ +I+D G F QVLR V +D++L TH HAD I G+D +R Sbjct: 81 GAHKYIIIDVGKTFREQVLRWFVRHKIPCVDSILLTHEHADAILGLDDVRVVQPFSPTND 140 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGV 158 P +Y + M + + F Y K ++ ++ +IE +D+ ++G Sbjct: 141 IDPTPIYLSQFAMDSISQKFPYLVKKKLKEGEEIRRVAQLDWKIIE-SDIQKPFITSG-- 197 Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL 209 +E +P+ HG LGF FG VAY +DV+ FP + + LD LI+D L Sbjct: 198 LEFVPLPVIHGEDYICLGFLFGRKSKVAYISDVSRFPPSTEYAISKCGGGQLDLLILDCL 257 Query: 210 -KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAF 261 + G H+ H ++L + I PK A+L M ++D+ ++ V A Sbjct: 258 YRTGSHNVHLCWDQTLDAVRRICPKRALLIGMTHEMDHHKDNQTLEEWSRREGIDVQLAR 317 Query: 262 DGMQF 266 DG++ Sbjct: 318 DGLRV 322 >gi|326513952|dbj|BAJ92126.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 337 Score = 231 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 45/302 (14%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S VP C P N R +SL I + G++ Sbjct: 35 LVFLGTGCSSAVPNARCLIQPSDPPCAVCSQSLSVPPELNPNYRCNTSLLIDYCQDEGAH 94 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRP 105 +I+D G F QVLR ++ +D+++ TH HAD I G+D +R P Sbjct: 95 KYIIIDVGKTFREQVLRWFVCHKIPCVDSIILTHEHADAILGLDDVRVVQPFSPSNDIDP 154 Query: 106 IDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + + F Y K ++ ++ +IE +D+ ++G ++ Sbjct: 155 TPIYLSQYAMDSISQKFPYLVKKKLKEGEEVRRVAQLDWRIIE-SDLQKPFTASG--LQF 211 Query: 162 IPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KN 211 +P+ HG LGF FG VAY +DV+ FP + + + LD LI+D L + Sbjct: 212 VPLPVIHGEDYICLGFLFGIKSKVAYVSDVSRFPPSTEDAISKSGGGQLDLLILDCLYRT 271 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGM 264 G H+ H ++L I+ I PK A+L + ++D+ ++ V A DG+ Sbjct: 272 GSHNVHLCWDQTLDAIKRICPKKALLIGLTHEMDHHKDNQTLEEWSRREGIDVQLARDGL 331 Query: 265 QF 266 + Sbjct: 332 RV 333 >gi|213404224|ref|XP_002172884.1| metallo-beta-lactamase family protein [Schizosaccharomyces japonicus yFS275] gi|212000931|gb|EEB06591.1| metallo-beta-lactamase family protein [Schizosaccharomyces japonicus yFS275] Length = 296 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 34/295 (11%) Query: 6 HFTILGCGASLGVPRITG------DWGAC----DPTNPKNRRTRSSLKISRVSERGSN-T 54 LG G S +P I C KNRR +S+ + SE G Sbjct: 4 KLIFLGTGTSSNIPVICCLVAKPPTCNVCLAAVTEEGKKNRRRNTSVIVQLDSENGERPK 63 Query: 55 TVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVY 109 T+++D G +FY L + + IDAVL THPHAD I+G+D LRG+ + + + +Y Sbjct: 64 TILIDCGKNFYEAALNVFPKNGLSEIDAVLLTHPHADAINGLDDLRGWTMNGPQSTLHIY 123 Query: 110 AAPDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + + + Y A P + + P + + ++ P+ Sbjct: 124 LTQETYDTIARAAPYMVDASKATGGGDVPAFTFHIFSP-ENPFNLLTC-NNVQVTPLPVH 181 Query: 168 HGRI---------SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 HG +GFR N++Y +D N P + ++ +++DAL++ H+SHF Sbjct: 182 HGSYFGEQKSKPFWCMGFRICNLSYISDTNFIPPSTKSLMEGSKVVVLDALRSFPHASHF 241 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDLDYDMVLK---STPSRVVPAFDGMQFSS 268 S ++ + +E + PK T ++ + + + PA+DG+ Sbjct: 242 SFDQAHEFVESMEKKPKKVFYTGFCHRTEHSDMERAFANLEPPTKPAYDGLVVEL 296 >gi|123976869|ref|XP_001330638.1| lipoate-protein ligase [Trichomonas vaginalis G3] gi|121897250|gb|EAY02377.1| lipoate-protein ligase, putative [Trichomonas vaginalis G3] Length = 266 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 24/269 (8%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ++G G+ G+P + D C + K++R R+S+ ++ N T+I+D G DF Q+ Sbjct: 6 LMGTGSEFGIPELGCDCPTCKSGDIKDKRERASIFLTT----SDNKTIIIDAGCDFRDQI 61 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + + A++ T HI GID +R + + I ++ + + L + + Y F Sbjct: 62 LRENLRQMSAIILTDDQYSHIMGIDEIRPFT--KDSSIPIFCSEKTKETLLKVYYYVFHV 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P + I+N ++ I PIL + S G+R G AY + Sbjct: 120 FQIGGGLPQMELKAIDN---DFTVEG----ITVTPILCSSPKRESYGYRLGTFAYLPECK 172 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + ESL KL ++ L+I A H + E+++ I I K +TH+ D Y Sbjct: 173 SISDESLSKLHGVETLVIGASGLKSHEDKLCIDEAIEYIIKIGAKRNYITHITHDNTYSD 232 Query: 249 VLKSTPSRVV-----------PAFDGMQF 266 +V +DG++ Sbjct: 233 CSSYISKKVQDDPRLNGVSIDMGYDGLEI 261 >gi|46447401|ref|YP_008766.1| putative phnP protein [Candidatus Protochlamydia amoebophila UWE25] gi|46401042|emb|CAF24491.1| putative phnP protein [Candidatus Protochlamydia amoebophila UWE25] Length = 238 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 9/241 (3%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C ++ N+R R S + + ++D GPDF +Q LR ++ ++D V+ TH H D Sbjct: 2 CHSSSSFNQRLRPSALV-----KTHFKQFLIDVGPDFRLQALRHRIHALDGVILTHAHQD 56 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H GID LR + K+ P+ + + + + + Y F + + + ++ + + Sbjct: 57 HTAGIDDLRPIYYKRITPLPILLSEITRIDIQQRYHYLFAT-EKKDFIQRLHLQTLPSL- 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + G I + Q G ++ GFRFG++AY +D+ FP +LQ+L L+I Sbjct: 115 IEGSVTFEGTSINYMTYEQ--GGMAVNGFRFGDLAYLSDIRTFPQTIFTQLQDLKILVIS 172 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 ALK HFS+ E+L I ++ LTH+ +LD+D V P V A+DG++ Sbjct: 173 ALKYTASQLHFSIDEALDFANKIGAESVWLTHLSHELDHDKVNAYLPKHVRLAYDGLEIE 232 Query: 268 S 268 Sbjct: 233 F 233 >gi|30691663|ref|NP_174321.2| unknown protein [Arabidopsis thaliana] gi|38566676|gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gi|40824143|gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gi|332193083|gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] Length = 324 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 +D LG G S VP C P N R +SL I Sbjct: 17 RDRSALIFLGTGCSSAVPNAMCLIQRSDNPCYVCSQSLSIPPEKNPNYRGNTSLLIDYCQ 76 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 G + + +D G F QVLR ++ +D+++ TH HAD + G+D +R Sbjct: 77 SDGKHKYIQIDVGKTFREQVLRWFTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPT 136 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSA 155 P ++ + M+ L F Y + + R + ++ E+ + P Sbjct: 137 NDIDPTPIFVSQYAMESLAVKFPYLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFVASG- 195 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 + P+ HG LGF FG VAY +DV+ FP + + LD LI+ Sbjct: 196 ---LSFTPLPVMHGEDYVCLGFLFGEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLIL 252 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVV 258 D L K G H++H ++L I+ ++PK A+L M + D+ + V Sbjct: 253 DTLYKTGSHNTHLCFPQTLDTIKRLSPKRALLIGMTHEFDHHKDNEFLEEWSKREGISVK 312 Query: 259 PAFDGMQFSSPI 270 A DG++ + Sbjct: 313 LAHDGLRVPIDL 324 >gi|12320859|gb|AAG50569.1|AC073506_11 hypothetical protein [Arabidopsis thaliana] Length = 323 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 +D LG G S VP C P N R +SL I Sbjct: 16 RDRSALIFLGTGCSSAVPNAMCLIQRSDNPCYVCSQSLSIPPEKNPNYRGNTSLLIDYCQ 75 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 G + + +D G F QVLR ++ +D+++ TH HAD + G+D +R Sbjct: 76 SDGKHKYIQIDVGKTFREQVLRWFTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPT 135 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSA 155 P ++ + M+ L F Y + + R + ++ E+ + P Sbjct: 136 NDIDPTPIFVSQYAMESLAVKFPYLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFVASG- 194 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 + P+ HG LGF FG VAY +DV+ FP + + LD LI+ Sbjct: 195 ---LSFTPLPVMHGEDYVCLGFLFGEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLIL 251 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVV 258 D L K G H++H ++L I+ ++PK A+L M + D+ + V Sbjct: 252 DTLYKTGSHNTHLCFPQTLDTIKRLSPKRALLIGMTHEFDHHKDNEFLEEWSKREGISVK 311 Query: 259 PAFDGMQFSSPI 270 A DG++ + Sbjct: 312 LAHDGLRVPIDL 323 >gi|329942585|ref|ZP_08291395.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|313847809|emb|CBY16800.1| putative metal-dependent hydrolase [Chlamydophila psittaci RD1] gi|325507035|gb|ADZ18673.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|328815495|gb|EGF85483.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|328914463|gb|AEB55296.1| lipoate-protein ligase B [Chlamydophila psittaci 6BC] Length = 273 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 20/270 (7%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G G+P C RR RSS+ I + +++D GPDF Sbjct: 13 KLTFLGSGNPEGIPVAFCPCEMC--KGKHIRRLRSSVLIE-----WAGKHILIDVGPDFR 65 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + +D V THPH DHI G+D LR +++ ++ + V + K+L ++ + Sbjct: 66 QQMLENNIEKLDGVFLTHPHYDHIGGMDDLRVWYVLHQQSLPVVLSSFTYKYLCKAREHL 125 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 D I N D +S + + +G+RFGN+AY T Sbjct: 126 VLPPDRDASLSAALNFTILNED---YGESTFLDLPFTYVTYHQKSCEVMGYRFGNLAYLT 182 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLH-------SSHFSLSESLKKIELINPKNAILT 238 D+N + + L +D LI+ +H ++S++ L+ K I T Sbjct: 183 DMNRYDHKIFSYLSGVDTLILSVSSTRPPQAFAGLGYAHLTMSQAEDFASLVGAKKLIFT 242 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+ L ++V + A+DGM+ S Sbjct: 243 HISHHLQKELVDY---PNKLWAYDGMEVSW 269 >gi|281420290|ref|ZP_06251289.1| lipoate-protein ligase B [Prevotella copri DSM 18205] gi|281405592|gb|EFB36272.1| lipoate-protein ligase B [Prevotella copri DSM 18205] Length = 221 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 11/219 (5%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 NT +++D GPD Q+LR ID VL TH H DH+ GID LR + + I++Y Sbjct: 5 ENTRILIDAGPDIRQQLLRVPFRKIDGVLVTHIHYDHVGGIDDLRPFCIF--GDINIYGD 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L + YCF ++ YP P + I ++ G IE +PI H Sbjct: 63 EIVTAGLPHTMPYCFPKNAEKLYPGAPKLKLHTIHPHE-----HYQIGDIEFVPIRVMHD 117 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIE 228 ++ LG+RFG AY TD+ + E L+ ++ L+I+AL+ H SH +S++++ Sbjct: 118 KMPILGYRFGKFAYITDMKSMGDEEYAYLEGVEMLVINALRFEKTHHSHQLVSDAIEVSR 177 Query: 229 LINPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQF 266 I K+ H+ + +D K P FDGM+ Sbjct: 178 RIGAKHTYFIHVTHQIGFHDEANKRLPEGFEFGFDGMEI 216 >gi|224116402|ref|XP_002317290.1| predicted protein [Populus trichocarpa] gi|222860355|gb|EEE97902.1| predicted protein [Populus trichocarpa] Length = 319 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 132/310 (42%), Gaps = 52/310 (16%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGS- 52 LG G S VP + C P N R +SL I SE + Sbjct: 15 LIFLGTGCSSAVPNVRCLLQPSDPPCSVCSQALSVPPNQNPNYRCNTSLVIDHYSESDNA 74 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKR 104 ++ +++D G F QVLR + ID+++ TH HAD + G+D +R + Sbjct: 75 HSYILIDVGKTFREQVLRWFTLHNIPRIDSIILTHEHADAVLGLDDIRAVQPYSPINDID 134 Query: 105 PIDVYAAPDCMKHLFESFRYCF----KALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVI 159 P +Y + M + E F Y K + ++ +IE ++ P I Sbjct: 135 PTPIYLSHHAMDSIAEKFPYLVQKQLKPGQEIRRVAQLDWHIIEEDHQRPFVASG----I 190 Query: 160 EAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL- 209 + +P+ HG SLGF FG VAY +DV+ P+ + + LD LI+D L Sbjct: 191 QFVPLPVMHGEDYISLGFLFGEKCRVAYISDVSRIPSSTEHVISKASAGQLDILILDTLY 250 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVLKSTPSRVVPA 260 KNG H++HF L ++L+ ++ + PK A+L M + D+ + P V A Sbjct: 251 KNGSHNTHFCLPQTLETVKRLCPKRALLIGMTHEFDHYKDNDFLTEWSQREGIP--VQLA 308 Query: 261 FDGMQFSSPI 270 DG++ + Sbjct: 309 RDGLRIPVEL 318 >gi|297845964|ref|XP_002890863.1| hypothetical protein ARALYDRAFT_473254 [Arabidopsis lyrata subsp. lyrata] gi|297336705|gb|EFH67122.1| hypothetical protein ARALYDRAFT_473254 [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 +D LG G S VP C P N R +SL I Sbjct: 16 RDRSALIFLGTGCSSAVPNAMCLIQRSDSPCYVCSQSLSIPPEKNPNYRGNTSLLIDYCQ 75 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 G + + +D G F QVLR ++ +D+++ TH HAD + G+D +R Sbjct: 76 IDGKHKYIQIDVGKTFREQVLRWFTLHKIPQVDSIILTHEHADAVLGLDDIRSVQPFSPT 135 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSA 155 P ++ + M L F Y + + R + I+ E+ + P Sbjct: 136 NDIDPTPIFVSQYAMDSLAVKFPYLVQKKLKEGQEVRRVAQLDWRIIEEDCEKPFVASG- 194 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 + P+ HG LGF FG VAY +DV+ FP + + LD LI+ Sbjct: 195 ---LSFTPLPVMHGEDYVCLGFLFGEKSRVAYISDVSRFPPNTEYAISKSGGGQLDLLIL 251 Query: 207 DAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVV 258 D L K G H++H ++L I+ ++PK A+L M + ++ + V Sbjct: 252 DTLYKTGSHNTHLCFPQTLDTIKRLSPKRALLIGMTHEFEHHKDNEFLEEWSKREGISVK 311 Query: 259 PAFDGMQFSSPI 270 A DG++ + Sbjct: 312 LAHDGLRVPIDL 323 >gi|255581240|ref|XP_002531432.1| conserved hypothetical protein [Ricinus communis] gi|223528951|gb|EEF30944.1| conserved hypothetical protein [Ricinus communis] Length = 326 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 47/312 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 + LG G S VP C P N R +SL I S Sbjct: 19 RSSSALIFLGTGCSNSVPNALCLIQPSDPPCNICLQSLSVPPDQNPNYRCNTSLLIDYYS 78 Query: 49 ERGS-NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 E + +++D G F QVLR ++ +D+++ TH HAD + G+D +R Sbjct: 79 ESEEKHKYILIDVGKTFREQVLRWFTFHKIPRVDSIILTHEHADAVLGLDDIRTVQPFSP 138 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + P+ VY + M + F Y + + R + I+ E+ P Sbjct: 139 TNEVDPVPVYLSQPTMNSITLKFPYLIKKELRGQEIRHVAQLEWKIIEEDCQRPFVASG- 197 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 ++ +P+ HG SLGF FG VAY +DV+ FPA + + +D LI+ Sbjct: 198 ---VQFVPLPVIHGEDYVSLGFLFGEKSRVAYISDVSRFPASTEYVISKAGAGQVDLLIL 254 Query: 207 DALKN-GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPSR----VV 258 D L+ G H+ HF L +SL+ ++ + PK A+L M ++D+ ++ L R V Sbjct: 255 DTLRRSGSHNVHFCLPQSLEAVKRLCPKQALLIGMGHEIDHYKDNVFLAEWSKREGIPVQ 314 Query: 259 PAFDGMQFSSPI 270 AFDG++ + + Sbjct: 315 LAFDGLRVTIDL 326 >gi|222617483|gb|EEE53615.1| hypothetical protein OsJ_36876 [Oryza sativa Japonica Group] Length = 390 Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 44/298 (14%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S VP C P N R +SL I + ++ Sbjct: 32 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVAPELNPNYRCNTSLLIDYCQDENAH 91 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRP 105 +++D G F QVLR ++ +D+++ TH HAD I G+D +R P Sbjct: 92 KYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHADAILGLDDVRIVQSFSPTNDIEP 151 Query: 106 IDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + + F Y + ++ ++ VIE +D+ I ++G +E Sbjct: 152 TPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVAQLDWRVIE-SDLQIPFVTSG--LEF 208 Query: 162 IPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KN 211 +P+ HG LGF FG VAY +DV+ FP + + LD LI+D L + Sbjct: 209 VPLPVIHGEDYICLGFLFGRKSKVAYISDVSWFPPSTEHAISKSGGGQLDLLILDCLSRT 268 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVP-AFDG 263 G H+ H ++L ++ I PK A+L M ++D+ ++ + ++DG Sbjct: 269 GSHNVHLCWDQTLDAVKRICPKRALLIGMTDEMDHHKDNETLEEWSRRSGIFLSSYDG 326 >gi|29840031|ref|NP_829137.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] gi|29834378|gb|AAP05015.1| metal-dependent hydrolase, putative [Chlamydophila caviae GPIC] Length = 277 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 119/273 (43%), Gaps = 22/273 (8%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G G+P C T + RR RSS+ I + ++D GPDF Sbjct: 19 KLIFLGSGNPEGIPAAFCSCAIC--TGKQIRRLRSSVLI-----AWAGKNFLIDAGPDFR 71 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L + +D V THPH DHI GID LR +++ +R + V + K+L ++ + Sbjct: 72 QQMLENHIQQLDGVFLTHPHYDHIGGIDDLRAWYVMHQRSLPVVVSAFTYKYLSKTREHI 131 Query: 126 -FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 F P +N ++ +S + + +G+RFGN+AY Sbjct: 132 VFPQSSATALPASLNFTILNEA----YGESTFLDLPYTYVTYYQKSCEVMGYRFGNLAYL 187 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINPKNAIL 237 TD+N + E L ++ LI+ A N +HF+LS++ + K I+ Sbjct: 188 TDMNRYDHEIFSYLSGVETLILSASPNQPPPAFHGYGHAHFTLSQAEDFASHVGAKKLII 247 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 TH+ +L L +V A+DGM+ S + Sbjct: 248 THISHNL--QKELADYSDKVC-AYDGMEVSWSL 277 >gi|168038334|ref|XP_001771656.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677095|gb|EDQ63570.1| predicted protein [Physcomitrella patens subsp. patens] Length = 311 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 85/311 (27%), Positives = 129/311 (41%), Gaps = 47/311 (15%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACDPT-------NPKNRRTRSSLKISRVS 48 +LG G+S GVP C NP N R SL IS + Sbjct: 5 GRSELIVLGSGSSTGVPSPLCVINPTDPPCNVCRMAMEGPHELNP-NYRCNPSLLISYLH 63 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----FL 100 G + +D G DF QVLR ++ +DA++ TH HAD + G+D +RG F Sbjct: 64 NDGQRRYIQIDAGKDFKEQVLRWFIPYKIPRLDALILTHEHADAMLGLDNVRGVQPVNFK 123 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCF----KALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ V+ M + F Y K ++ + VIE + I + Sbjct: 124 NDIPPMPVFVTQHTMDSVALKFPYLASKKRKEGEELRRVAQFDWRVIEPS---IDTRFQA 180 Query: 157 GVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIID 207 G + P+ HG LGF FG VAY +DV+ P + + +DFL +D Sbjct: 181 GGLTFTPLPVYHGEDYICLGFLFGEKTRVAYISDVSRIPTRTEHAIAKYGAGQVDFLFLD 240 Query: 208 AL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVP 259 +L K H++H + ESLK I+ + PK A L M + ++D+ K V Sbjct: 241 SLYKETPHNTHMTFPESLKVIKKLQPKRAFLIGMTHEFEHDLDSKILAEWSARERIPVEF 300 Query: 260 AFDGMQFSSPI 270 ++DG++ + Sbjct: 301 SYDGLRIPVDL 311 >gi|15618390|ref|NP_224675.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|15836010|ref|NP_300534.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|16752563|ref|NP_444825.1| metal-dependent hydrolase, putative [Chlamydophila pneumoniae AR39] gi|33241831|ref|NP_876772.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|4376764|gb|AAD18619.1| Metal Dependent Hydrolase [Chlamydophila pneumoniae CWL029] gi|8163401|gb|AAF73652.1| metal-dependent hydrolase, putative [Chlamydophila pneumoniae AR39] gi|8978849|dbj|BAA98685.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|33236340|gb|AAP98429.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] Length = 270 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 78/272 (28%), Positives = 117/272 (43%), Gaps = 20/272 (7%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G G+P C T R RSS+ I N T+++D GPDF Sbjct: 12 KLVFLGTGNPEGIPVPFCSCRVCQNTGIH--RLRSSVLIQYQ-----NKTLVIDAGPDFR 64 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V +D V THPH DHI GID LR +++ +R + + + + L ++ Y Sbjct: 65 TQMLVAGVSELDGVFLTHPHYDHIGGIDDLRAWYIVTQRSLPLVLSASTYRFLNKAKEYL 124 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + P V I N D C + I + GFRFGN+AY T Sbjct: 125 FATPNVESSLPAVLEFTILNED---CGQEEFQGIPYTYVSYYQKSCHVTGFRFGNLAYLT 181 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-SHFSLSESLKKIELINPKNAILT 238 D+ ++ A+ L N++ LI+ A + H SH ++ E+ KN I+T Sbjct: 182 DLCSYDAKIFSYLDNVETLILSAGPSETPIPFQGHKSSHLTVEEAKAFANHAGIKNLIIT 241 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H+ L + V A+DGM+ + Sbjct: 242 HISHCL---EAERDQHPEVTFAYDGMEVLWTL 270 >gi|218187251|gb|EEC69678.1| hypothetical protein OsI_39116 [Oryza sativa Indica Group] Length = 337 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 118/291 (40%), Gaps = 40/291 (13%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S VP C P N R +SL I + ++ Sbjct: 29 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVPPELNPNYRCNTSLLIDYCQDEVAH 88 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRP 105 +++D G F QVLR ++ +D+++ TH HAD I G+D +R P Sbjct: 89 KYILIDVGKTFREQVLRWFIHHKIPGVDSIILTHEHADAILGLDDVRIVQPFSPTNDIEP 148 Query: 106 IDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIE-NNDVPICMKSAGGVIE 160 +Y + M + + F Y + ++ ++ VIE + P G Sbjct: 149 TPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVAQLDWRVIESDLQKPFVTSGLG---- 204 Query: 161 AIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-K 210 +P+ HG LGF FG VAY +DV+ FP + + LD LI+D L + Sbjct: 205 FVPLPVIHGEDYVCLGFLFGRKSKVAYISDVSRFPPSTEHAISKSGEGQLDLLILDCLYR 264 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 G H+ H ++L ++ I PK A+L M ++D+ ++ AF Sbjct: 265 TGSHNVHLCWDQTLDAVKRICPKRALLIGMTHEMDHHKDNETLEEWSRRAF 315 >gi|261880363|ref|ZP_06006790.1| lipoate-protein ligase B [Prevotella bergensis DSM 17361] gi|270332907|gb|EFA43693.1| lipoate-protein ligase B [Prevotella bergensis DSM 17361] Length = 215 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 10/219 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 T V++D GPD MQ++ + IDAVL TH H DH GID LR ID+Y Sbjct: 5 ETTRVLIDCGPDIRMQLMPLEFRKIDAVLLTHEHYDHAGGIDDLRPCCYF--GNIDIYGN 62 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 +K + +F YCF P + I ++ G I +PI HG++ Sbjct: 63 DMTVKAVKHNFPYCF-TEHLYPGVPKLTLHAIRKHE-----PMRVGDINILPIEVMHGKL 116 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELI 230 LG+RFG++AY TD+ A + LQ ++ L+++AL+ H SH + E++ I Sbjct: 117 PILGYRFGSMAYITDMKAISPDECVYLQGVETLVLNALRWAKPHHSHLIIPEAIDFSRRI 176 Query: 231 NPKNAILTHMHVDLD-YDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ + +++ P A+DG++ Sbjct: 177 GASRTFLTHLTHKIGLHEVANDRLPEGFQFAYDGLEIDV 215 >gi|62184899|ref|YP_219684.1| putative hydrolase [Chlamydophila abortus S26/3] gi|62147966|emb|CAH63714.1| putative hydrolase [Chlamydophila abortus S26/3] Length = 273 Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 22/275 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T LG G G+P C + RR RSS+ I+ + ++D+G Sbjct: 9 TSSGKLTFLGSGNPEGIPVAFCSCAMCT--GRQIRRLRSSVLIT-----WAGKHFLIDSG 61 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF Q+L + +D V THPH DHI GID LR +++ ++ + V + K+L + Sbjct: 62 PDFRQQMLENHIEKLDGVFLTHPHYDHIGGIDDLRVWYVLHQQSLPVVLSASTYKYLCQY 121 Query: 122 FRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 ++ F D +++ ++ N+ G + Q+ +G+RFGN Sbjct: 122 RKHIVFPQGQDSALSAVLDFTIL--NERYGESTFLGLPFTYVTYYQK--SCEVMGYRFGN 177 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINPK 233 +AY TD++ + E + L +D LI+ L +H ++S++ LI K Sbjct: 178 LAYLTDMSRYDHEIVSYLSGVDTLILSVTCQQLPKVFSRQGYAHLTISQAEDFAALIGVK 237 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 I TH++ L ++ S + A+DGM+ S Sbjct: 238 KVIFTHINHSLQKELANY---SDKLWAYDGMEVSW 269 >gi|269303356|gb|ACZ33456.1| metallo-beta-lactamase family protein [Chlamydophila pneumoniae LPCoLN] Length = 270 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 116/272 (42%), Gaps = 20/272 (7%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G G+P C T R RSS+ I N T+++D GPDF Sbjct: 12 KLVFLGTGNPEGIPVPFCSCRVCQNTGIH--RLRSSVLIQYQ-----NKTLVIDAGPDFR 64 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+L V +D V THPH DHI GID LR +++ +R + + + + L ++ Y Sbjct: 65 TQMLVAGVSELDGVFLTHPHYDHIGGIDDLRAWYIVTQRSLPLVLSASTYRFLNKAKEYL 124 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 F + + P V I N D + I + GFRFGN+AY T Sbjct: 125 FATPNVESSLPAVLEFTILNED---YGQEEFQGIPYTYVSYYQKSCHVTGFRFGNLAYLT 181 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-SHFSLSESLKKIELINPKNAILT 238 D+ ++ A+ L N++ LI+ A + H SH ++ E+ KN I+T Sbjct: 182 DLCSYDAKIFSYLDNVETLILSAGPSETPIAFQGHKSSHLTVEEAKAFANHAGIKNLIIT 241 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 H+ L + V A+DGM+ + Sbjct: 242 HISHCL---EAERDQHLEVTFAYDGMEVLWTL 270 >gi|19075752|ref|NP_588252.1| hydrolase (predicted) [Schizosaccharomyces pombe 972h-] gi|74626870|sp|O74545|YCV6_SCHPO RecName: Full=Putative hydrolase C777.06c gi|3560243|emb|CAA20710.1| hydrolase (predicted) [Schizosaccharomyces pombe] Length = 301 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 40/302 (13%) Query: 2 KDYYHFTILGCGASLGVPRITG------DWGAC----DPTNPKNRRTRSSLKISRVSERG 51 K +G G S G+P + C P KN R +S+ + G Sbjct: 3 KGTSKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSG 62 Query: 52 SN-TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRP 105 +++D G FY+ L+ ++ +DAV+ TH HAD I+G+D LR + L + Sbjct: 63 DRPKNILIDCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPS 122 Query: 106 IDVYAAPDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y K + SF Y A + P + V D P + I P Sbjct: 123 VKIYLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSP-DKPFKLDDI--DISVTP 179 Query: 164 ILQQHG----------RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + HG +GFR G+++Y +D N P + + ++ + +++DALK+ Sbjct: 180 LPVHHGVYFIEGKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEP 239 Query: 214 HSSHFSLSESLKKIELIN--PKNAILTHMHVDLDYDMVLKST-----PSRVVPAFDGMQF 266 + SHFS ++ + I + P + T ++++ +K P+ PA+DG Sbjct: 240 YPSHFSFKQAEEFIASLEHVPSRVLYTGFSHKVEHNETVKELSVLKVPT--EPAYDGQIV 297 Query: 267 SS 268 Sbjct: 298 EF 299 >gi|255635092|gb|ACU17904.1| unknown [Glycine max] Length = 322 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 75/310 (24%), Positives = 122/310 (39%), Gaps = 50/310 (16%) Query: 7 FTILGCGASLGVPRITG-------DWGAC------DPTNPKNRRTRSSLKISR---VSER 50 LG G S VP + C P N R +SL I + Sbjct: 17 LIFLGTGCSSMVPNLMCLLQPSDPPCPVCVQSLSIPPERNPNYRCNTSLLIDYGAAAANG 76 Query: 51 GSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQ 102 G +++D G F VLR ++ ID+++ TH HAD + G+D +R Sbjct: 77 GDRKYILIDVGKTFRETVLRWFVAHRIPRIDSIILTHEHADAVLGLDDIRAVQAFSPTND 136 Query: 103 KRPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 P +Y + M + E F Y + + R I I+ ++ + Sbjct: 137 IDPTPIYLSQHSMDSIAEKFPYLVQKKRKEGAEIRRVAQIDWNIIADDCNQQFFASG--- 193 Query: 158 VIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDA 208 ++ P+ HG LGF FG VAY +DV+ FPA + + LD LI+D+ Sbjct: 194 -LKFTPLPVMHGEDYICLGFLFGEKNRVAYISDVSRFPASTEYVISKSGAGQLDLLILDS 252 Query: 209 L-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPA 260 L + G H+ H ++L+ ++ + PK +L M + D+ +S V A Sbjct: 253 LYRTGSHNVHLCFPQTLETVKRLCPKQTLLIGMTHEFDHHKDNESLMEWSRREGIPVKLA 312 Query: 261 FDGMQFSSPI 270 DG++ + Sbjct: 313 HDGLRVPINL 322 >gi|147854386|emb|CAN79104.1| hypothetical protein VITISV_006256 [Vitis vinifera] Length = 377 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 75/333 (22%), Positives = 125/333 (37%), Gaps = 86/333 (25%) Query: 3 DYYHFTILGCGASLGVPRITG------DWGACD-PTNP--KNRRTRSSLKISRVSERGSN 53 + LG G S G+PR++ C +P KNRR +S+ I S G Sbjct: 66 EQSEIIFLGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSSKNRRLNTSILIRYPSSSG-G 124 Query: 54 TTVIVDTGPDFYMQVLRE------------------------------------------ 71 T+++D G FY LR Sbjct: 125 CTILIDVGKFFYHSALRWFPTFGLLVDYLNFDDNTDVFIAFLTVILFYCFVFHHMYLPFV 184 Query: 72 ------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 ++ +IDAV+ TH HAD I G+D LR + + I +Y AP + + ++ Y Sbjct: 185 TSCISVRIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAPRDFEVMKKTHYYL 244 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGNVAYC 184 + ++ P + ++ IP+ HG SLGFRFGN+ Y Sbjct: 245 VDTSVIIPGAAVSELQFNIIHEEPFIVH----DLKVIPLPVWHGPGYRSLGFRFGNICYI 300 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 +DV+ P E+ L+N + L++ +L ++ I PK + T M + Sbjct: 301 SDVSEIPEETYPLLKNCEILVL----------------ALDEVRKIQPKRTLFTGMMHLM 344 Query: 245 DYDMVLKSTPS-------RVVPAFDGMQFSSPI 270 D++ V + V ++DG++ + Sbjct: 345 DHEKVSEDLEKLKKTEGLDVQLSYDGLRVPVTL 377 >gi|240255743|ref|NP_192270.4| unknown protein [Arabidopsis thaliana] Length = 303 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 119/303 (39%), Gaps = 51/303 (16%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS- 48 D LG G S VP C P N R +SL I S Sbjct: 9 DGTALIFLGTGCSGAVPDFRCLLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSK 68 Query: 49 -ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----Q 102 E G + +++D G F Q ++ TH HAD +HG+D +R + Sbjct: 69 EEDGRHKYILIDVGKSFREQ-----------IILTHEHADAVHGLDEIRSLQPRGATIVD 117 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ V+ + M+ + F Y + + P V+ + +N + A + Sbjct: 118 TDPLPVFLSQFTMESIATRFPYLVEK-KVKEVPRRVSLLDWKNIEENCDEPFAASGLSFT 176 Query: 163 PILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDA---LK 210 P+ HG +LGF FG+ VAY +DV+ P + + LD LI+D K Sbjct: 177 PLPVMHGEDYIALGFLFGDKSKVAYISDVSRIPPSTEYAISKAGAGQLDLLILDTNIPWK 236 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 G H +H +E+L+ ++ + PK A+LT M + D+ + V A DG Sbjct: 237 RGPHPTHICFTEALEILKRLCPKRALLTGMTHEFDHHEYNEILAEWSLREGIHVQLAHDG 296 Query: 264 MQF 266 ++ Sbjct: 297 LRL 299 >gi|222625444|gb|EEE59576.1| hypothetical protein OsJ_11873 [Oryza sativa Japonica Group] Length = 1053 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 52/311 (16%) Query: 1 MKDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRV 47 M+ LG G S +P C P N R +SL I Sbjct: 1 MESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYC 60 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----F 99 G + +++D G F QVLR ++ +D+++ TH HAD + G+D + Sbjct: 61 QHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGC 120 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ M + F Y K D+ + ++ +IE D+ S+ Sbjct: 121 RNGLGKVPIFLTHFTMNSVAARFPYLLKNKLEEGDEGSQVIQLDWTIIEG-DIDKPFVSS 179 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 G +E +P+ HG LGF FG +AY +DV+ + + LD LI+ Sbjct: 180 G--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRTEHAISKSGAGQLDLLIL 237 Query: 207 DALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR---- 256 + N LH S H +LS++L ++ I+PK A+L M+ + ++ ++ Sbjct: 238 ET--NELHGEGDAGSCHLTLSQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAEWSSRE 295 Query: 257 ---VVPAFDGM 264 V A DG+ Sbjct: 296 GIPVQLAHDGL 306 >gi|225164195|ref|ZP_03726471.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] gi|224801204|gb|EEG19524.1| beta-lactamase domain protein [Opitutaceae bacterium TAV2] Length = 260 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 19/272 (6%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S G+P I + C T+P+N RTRSS+ + + +D P+F Sbjct: 1 MDIIFLGTGTSHGIPMIACECPVCTSTDPRNHRTRSSVHVIM-----DGLRIQIDAAPEF 55 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 +Q +RE++ ID + TH HADHI G+D LR + ++ + VY+ + + + + Sbjct: 56 RLQCVREKITDIDLFILTHGHADHIVGMDDLRRFCDRREGTALPVYSTDEGLSRVLAIYP 115 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y V+ P + G I + L HG +++LG F Sbjct: 116 YAIIERPVTQGYAAFQLTVM-----PPVLTFPQGTISST--LLPHGGVNTLGLVFEERST 168 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 Y TD PA ++ D +++D L+ H +H +++E+L+ I L Sbjct: 169 GCKFTYYTDCKRVPAAAVALAAGSDAVVLDGLRPQEHPTHMNITEALEAARAIAAPQTYL 228 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 THM +D+ V + P + A DG++ Sbjct: 229 THMAHTVDHPTVSATLPPGIALAHDGLRLHLE 260 >gi|330444281|ref|YP_004377267.1| metal dependent hydrolase [Chlamydophila pecorum E58] gi|328807391|gb|AEB41564.1| metal dependent hydrolase [Chlamydophila pecorum E58] Length = 263 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 25/269 (9%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G G+P C K +R R S+ I ++D GPDF Sbjct: 8 KLIFLGTGNPEGIPVPFCSCPVCS--GGKVQRLRPSVLIEYQG-----KNYLIDVGPDFR 60 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LR + + V +TH H DHI GID LR ++L +RP+ V + +++ S Y Sbjct: 61 EQMLRYGIRELSGVFFTHEHYDHIGGIDDLRSWYLTFQRPLPVVMSGSTYRYIQSSKGYL 120 Query: 126 FKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---RISSLGFRFGNV 181 + + + P +++ ++ GV E +P GF FGN+ Sbjct: 121 LTPQNAEASLPAVLDFRLLNE-------PYGEGVFEGLPYRYVSYFQRSCGVTGFCFGNL 173 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSLSESLKKIELINPKNAIL 237 AY TD++ + + L+++D LI+ + G SSH +LSE+ E + +N I Sbjct: 174 AYLTDISRYERKIFGYLEHIDTLILSVSASSGFMGRASSHLTLSEAESFAEHLGVQNVIF 233 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 TH+ ++ +++ A+DGM+ Sbjct: 234 THIGHVVEQEILQY---PGRTFAYDGMEV 259 >gi|320166018|gb|EFW42917.1| metallo-beta-lactamase [Capsaspora owczarzaki ATCC 30864] Length = 426 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 79/328 (24%), Positives = 123/328 (37%), Gaps = 70/328 (21%) Query: 6 HFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKIS----------- 45 LG G S +P ++ AC + N +NRR +SL + Sbjct: 12 EVIFLGTGTSGQIPSVSCLSVPRPTCAACVDSVKPNSRNRRRNTSLLVRARVAPKSPRQD 71 Query: 46 -RVSERGSNT------------------------TVIVDTGPDFYMQVLRE----QVLSI 76 R G+ T +++D G FY +R + I Sbjct: 72 VRTHSNGNGTSVNGDAVHTVDPNLSAAAAKSHVRNIVIDVGKSFYEGAIRWFLDYGITDI 131 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCFKALD--DR 132 AV+ TH HAD + +D LR + + + + + V+ P M + F Y Sbjct: 132 HAVVLTHEHADAVLRLDDLRDWTMYRDDQPSLPVFLDPPTMAAVSRLFPYMVDETKATGS 191 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGNVAYCTDVNAFP 191 P + V + P + +E P + HG+ +SLGFRF NV Y +DV+ Sbjct: 192 GLVPKIKFCVFDPTQ-PFNVLG----VEFAPFVVPHGKNCTSLGFRFSNVTYLSDVSDLD 246 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN--PKNAILTHMHVDLDYDMV 249 ++ E + D I+D LK H SHF L E+L E I P+ LT M +++ Sbjct: 247 EKAYEWIDGSDIFIVDTLKEVSHVSHFGLDEALAASERIRPAPRQVYLTGMCHLMEHHSS 306 Query: 250 LKSTPS---------RVVPAFDGMQFSS 268 K V A+DG++ Sbjct: 307 NKKLAKLYASGSIGMPVECAYDGLRLDV 334 >gi|194707044|gb|ACF87606.1| unknown [Zea mays] Length = 347 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 53/312 (16%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 LG G S +P G C P N R +SL I Sbjct: 38 SSSSSLIFLGTGCSGSLPDTRCLLKPSTPPCGVCSMGVSLPPERNPNYRLNTSLLIDYCH 97 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++ +++D G F QVLR +V S+++++ TH HAD + G+D + + R Sbjct: 98 DE-THKYILIDIGKTFREQVLRWFVHHKVPSVNSIILTHEHADAVLGLDEVWVVQPRNGR 156 Query: 105 P----IDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAG 156 I ++ M + F Y + + ++ +IE+ DV ++G Sbjct: 157 NDIEQIPIFLTQFTMDSIARRFPYLMEQKPEDGDEDAQAAKIDWKIIED-DVDKPFVASG 215 Query: 157 GVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIID 207 +E +P+ HG LGF FG VAY +DV+ F ++ + LD LI++ Sbjct: 216 --LEFVPLPVMHGEGYICLGFLFGRRARVAYLSDVSRFLPKTENVISKSGAGQLDLLILE 273 Query: 208 ALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST-----PSR 256 A N LH S+H +LSESL I+ I PK A+L M +++ + Sbjct: 274 A--NALHGVGDSSSTHLTLSESLDAIKRIRPKQALLIGMRHFFEHERENQMLAEWSIREG 331 Query: 257 V--VPAFDGMQF 266 + A DG++ Sbjct: 332 ISTQLAHDGLRV 343 >gi|298675725|ref|YP_003727475.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] gi|298288713|gb|ADI74679.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] Length = 247 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 33/270 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + GVP I C N KN+RTR S+ + +++DT P Sbjct: 1 MKITLLGTGDTTGVPVIGCHCPTCTDAYSNDKNKRTRFSILVE-----SDAGKILIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q++ V +D V++TH H DH G F + ++ +DVY P+ + ++ + F Sbjct: 56 DMKWQLIANDVSGVDGVIWTHGHYDHFAGFPE----FYRVQKKVDVYGVPETLDYIMDYF 111 Query: 123 RYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + + D + Y P I + + +PI + G + G + V Sbjct: 112 HFLKPRRHDVQLYEPF----------ELIGLTFVLFEVNHLPIKKAVGVMVCEGEK--KV 159 Query: 182 AYCTDVN-AFPAESLEKLQNLDFLIIDALKNGLHSS---HFSLSESLKKIELINPKNAIL 237 D N P +S++ + D L++DA+ +S H + ++L E I K + Sbjct: 160 VITGDTNKDVPQKSMDLIHKPDLLVVDAIVPPSITSIKKHMNAIQALDFSEKIKAKKVVF 219 Query: 238 THMHVDL-DYDMVLKSTPSRVVPAFDGMQF 266 HM +D K+ P +DGM+F Sbjct: 220 VHMSHFFKPHDEESKNYP----LGYDGMKF 245 >gi|160891926|ref|ZP_02072929.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] gi|156858404|gb|EDO51835.1| hypothetical protein BACUNI_04384 [Bacteroides uniformis ATCC 8492] Length = 196 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 11/202 (5%) Query: 68 VLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 +LR ID VL TH H DH+ G+D LR + + I +Y+ HL YCF Sbjct: 1 MLRASSFEKIDGVLVTHEHYDHVGGLDDLRPF--GRFADIPIYSDAYTAAHLRARMPYCF 58 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-NVAYCT 185 D+ YP + + +V E +P+ HGR+ LG+R G + Y T Sbjct: 59 V---DKVYPGVPRIYL---QEVEAGQVFHINRTEVLPLRVMHGRLPILGYRIGGRLGYIT 112 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 D++ P ES E+L+ LD L+++AL+ H +H S+SE+L+ I K HM Sbjct: 113 DMHMMPEESYEQLKGLDVLVMNALRPKPHPTHQSISEALEAAGRIGAKETYFIHMSHHAG 172 Query: 246 -YDMVLKSTPSRVVPAFDGMQF 266 + + K P V A+DG++ Sbjct: 173 LHADIEKQLPPHVHFAYDGLEI 194 >gi|328769130|gb|EGF79174.1| hypothetical protein BATDEDRAFT_89854 [Batrachochytrium dendrobatidis JAM81] Length = 329 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 126/326 (38%), Gaps = 61/326 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITG-------DWGACDPT---------------------- 31 M F LG G S VP I C Sbjct: 1 MGKVKEFIFLGTGTSGSVPNIHCLVKDPIPTCKVCLSAITYQQPHLVQDSASSIQLPLLH 60 Query: 32 ---NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHP 84 KNRR +S + + G V++D G FY L ++ +IDAV+ TH Sbjct: 61 LPHFSKNRRRNTSGVVRFMHSDGRMRNVVIDCGKTFYDSALSWFVEYRLRNIDAVILTHG 120 Query: 85 HADHIHGIDGLRGYF-----LKQKRPIDVYAAPDCMKHLFESFRYCF---KALDDRTYPP 136 HAD I G+D LR + + ++ +D+Y + M+ + +F Y KA P Sbjct: 121 HADAIFGLDELRQWTIGGEDRRLQKIVDIYLDQETMEVVARAFPYMVDSAKATGGGDVPS 180 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-----ISSLGFRFGNVAYCTDVNAFP 191 + I+ +N D PI + IP +HG+ SLGFRF N+ Y +D NA P Sbjct: 181 VRFNIIEKNADGPIPF-LIDNELTVIPFEVEHGKNGTKPFMSLGFRFENLTYISDANAIP 239 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK--KIELINPKNAILTHMHVDLDYDMV 249 + ++ LIIDAL H SHF +++ + L T + +DYD + Sbjct: 240 PRAGSIIKGSTHLIIDALNVEPHCSHFGFDQAIHECILALAKGGKGYFTGLSHSMDYDDL 299 Query: 250 L-----KSTPS----RVVPAFDGMQF 266 K +P + FDG + Sbjct: 300 QEYIASKQSPKDAGIHIECGFDGQRI 325 >gi|125545042|gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group] Length = 885 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 45/295 (15%) Query: 1 MKDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRV 47 M+ LG G S +P C P N R +SL I Sbjct: 1 MESSSSVIFLGTGCSGALPEARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYC 60 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----F 99 G + +++D G F QVLR ++ +D+++ TH HAD + G+D + Sbjct: 61 QHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGC 120 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ M + F Y K D+ + ++ +IE D+ S+ Sbjct: 121 RNGLGKVPIFLTHFTMNSVAARFPYLLKNKLEEGDEGSQVIQLDWTIIEG-DIDKPFVSS 179 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 G +E +P+ HG LGF FG +AY +DV+ + + LD LI+ Sbjct: 180 G--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRTEHAISKSGAGQLDLLIL 237 Query: 207 DALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 + N LH S H +LS++L ++ I+PK A+L M+ + ++ ++ Sbjct: 238 ET--NELHGEGDAGSCHLTLSQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAE 290 >gi|226498240|ref|NP_001144639.1| hypothetical protein LOC100277658 [Zea mays] gi|195644950|gb|ACG41943.1| hypothetical protein [Zea mays] Length = 347 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 49/310 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 LG G S +P G C P N R +SL I Sbjct: 38 SSLSSLIFLGTGCSGSLPDTRCLLKPSTPPCGVCSMGVSLPPERNPNYRLNTSLLIDYCH 97 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++ +++D G F QVLR +V S+++++ TH HAD + G+D + + R Sbjct: 98 DE-THKYILIDIGKTFREQVLRWFVHHKVPSVNSIILTHEHADAVLGLDEVWVVQPRNGR 156 Query: 105 P----IDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAG 156 I ++ M + F Y + + ++ +IE+ DV ++G Sbjct: 157 NDIEQIPIFLTQFTMDSIARRFPYLMEQKPEDGDEDAQAAKIDWKIIED-DVDKPFVASG 215 Query: 157 GVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLII- 206 +E +P+ HG LGF FG VAY +DV+ F ++ + LD LI+ Sbjct: 216 --LEFVPLPVMHGEGYICLGFLFGRRARVAYLSDVSRFLPKTENVISKSGAGQLDLLILE 273 Query: 207 -DALKN--GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST-----PSRV- 257 +AL S+H +LSESL I+ I PK A+L M +++ + + Sbjct: 274 ANALHGVGDSFSTHLTLSESLDAIKRIRPKQALLIGMRHFFEHERENQMLAEWSIREGIP 333 Query: 258 -VPAFDGMQF 266 A DG++ Sbjct: 334 TQLAHDGLRV 343 >gi|329922131|ref|ZP_08277891.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|328942387|gb|EGG38653.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 259 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 102/274 (37%), Gaps = 34/274 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++GVPR+ D C NRR RSS+ + T+ ++D GPD+ Sbjct: 6 LTFLGTGDAMGVPRVYCDCEVCTEARSTGVNRRLRSSVMVEC-----GETSFMIDCGPDW 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + + +L TH H DHI G+ Q+ +YA + + + + + Sbjct: 61 RGMMEGLGIRKMSDMLITHAHFDHIGGLPEWSDACRWQREKGRLYAPAEVLDQIVRQYPW 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGNVAY 183 P +E V AG I HG+ S +RF Y Sbjct: 121 L--------------PRQMEMTPVDEGFTLAGWEISCW--KVNHGKNGYSYAYRFQKDGY 164 Query: 184 C----TDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIELINPKN 234 +D E E L+ +D L++ S + + E+ + + + P+ Sbjct: 165 TWVYNSDSIHLSLEEKEPLKGVDLLVLGTSFVHETAQFETRSVYDMKEAAELLAEVKPRQ 224 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + THM D+D L P V A GM Sbjct: 225 TVYTHMSHDVDVRKEL-PLPEGVRVAVAGMTVRL 257 >gi|326507544|dbj|BAK03165.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 321 Score = 214 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 52/311 (16%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSE 49 LG G S +P C P N R +SL + + Sbjct: 12 GSSSLIFLGTGCSGALPDARCLLKPSTPPCAVCSMGISLPPEGNPNYRLNTSLLVDYCHD 71 Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G++ +++D G F QVLR +V +D+++ TH HAD + G+D + + R Sbjct: 72 DGTHKYILIDIGKTFREQVLRWFVHHKVPYVDSIILTHEHADAVLGLDEVWVVQPRNGRN 131 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGG 157 I ++ M + F Y + + ++ +IE DV ++G Sbjct: 132 DVEQIPIFLTQFTMDSIARRFPYLVEQKPEDGDEDAQAAKIDWKIIEE-DVDKPFVASG- 189 Query: 158 VIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAF-PAESLEKLQ----NLDFLIIDA 208 +E +P+ HG LGF FG VAY +DV+ F P L+ +D LI++A Sbjct: 190 -LEFVPLPVMHGEGYICLGFLFGRRARVAYLSDVSRFLPETEHAILKSGAGQVDLLILEA 248 Query: 209 LKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST-----PSRV 257 N LH S+H +LSESL I+ I+PK A+L M ++ + + Sbjct: 249 --NSLHGVGDSFSTHLTLSESLDAIKRIHPKRALLIGMRHFFEHQRENQMLAEWSTREGI 306 Query: 258 --VPAFDGMQF 266 A DG++ Sbjct: 307 PTQLAHDGLRV 317 >gi|261408973|ref|YP_003245214.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261285436|gb|ACX67407.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 259 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 102/274 (37%), Gaps = 34/274 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++GVPR+ D C NRR RSS+ + T+ ++D GPD+ Sbjct: 6 LTFLGTGDAMGVPRVYCDCEVCTEARSTGVNRRLRSSVMVEC-----GETSFMIDCGPDW 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + + +L TH H DHI G+ Q+ +YA + + + + + Sbjct: 61 RGMMEGLGIRKMSDMLITHAHFDHIGGLPEWSDACRWQREKGRLYAPAEVLDQIVRQYPW 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGNVAY 183 P +E V AG I HG+ S +RF Y Sbjct: 121 L--------------PRQMEMTPVDDGFTLAGWEISCW--KVNHGKNGYSYAYRFQKDGY 164 Query: 184 C----TDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKKIELINPKN 234 +D E + L+ +D L++ S + + E+ + + + P+ Sbjct: 165 TWVYNSDSIHLSLEEKKPLKGVDLLVLGTSFVHETAKFETRSVYDMKEAAELLAEVKPRQ 224 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + THM D+D L P V A GM Sbjct: 225 TVYTHMSHDVDVRKEL-PLPEGVRVAVAGMTVRL 257 >gi|218193394|gb|EEC75821.1| hypothetical protein OsI_12786 [Oryza sativa Indica Group] Length = 313 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 52/312 (16%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 LG G S +P C P N R +SL I Sbjct: 3 SSSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSQSLSLPPERNPNYRCNTSLLIDYCQ 62 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----FL 100 G + +++D G F QVLR ++ +D+++ TH HAD + G+D + Sbjct: 63 HDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVIQPSGCG 122 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + ++ M + F Y + D+ + ++ +IE D+ S+G Sbjct: 123 NGFGQLPIFLTQFTMDSVAARFPYLMKNNLEEGDEGSQVIQLDWRIIEG-DIDKPFVSSG 181 Query: 157 GVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIID 207 +E +P+ HG LGF FG +AY +DV+ + + LD LII+ Sbjct: 182 --LEFVPLPVMHGEDYVCLGFLFGRKARIAYLSDVSRILPRTEHAISKSGAGQLDLLIIE 239 Query: 208 ALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----- 256 N LH S H +LS++L ++ ++PK A+L M+ + ++ ++ Sbjct: 240 T--NELHGEGDAGSCHLTLSQTLNAVKRLSPKRALLIGMNHEFEHHKENQTLAEWSSREG 297 Query: 257 --VVPAFDGMQF 266 V A DG++ Sbjct: 298 IPVQLAHDGLRV 309 >gi|53749417|gb|AAU90275.1| calcium binding EGF domain containing protein [Oryza sativa Japonica Group] gi|108710052|gb|ABF97847.1| Calcium binding EGF domain containing protein, expressed [Oryza sativa Japonica Group] Length = 1096 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 45/295 (15%) Query: 1 MKDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRV 47 M+ LG G S +P C P N R +SL I Sbjct: 1 MESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYC 60 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----F 99 G + +++D G F QVLR ++ +D+++ TH HAD + G+D + Sbjct: 61 QHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGC 120 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ M + F Y K D+ + ++ +IE D+ S+ Sbjct: 121 RNGLGKVPIFLTHFTMNSVAARFPYLLKNKLEEGDEGSQVIQLDWTIIEG-DIDKPFVSS 179 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLII 206 G +E +P+ HG LGF FG +AY +DV+ + + LD LI+ Sbjct: 180 G--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRTEHAISKSGAGQLDLLIL 237 Query: 207 DALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 + N LH S H +LS++L ++ I+PK A+L M+ + ++ ++ Sbjct: 238 ET--NELHGEGDAGSCHLTLSQTLNAVKRISPKRALLIGMNHEFEHHKENQTLAE 290 >gi|297624828|ref|YP_003706262.1| beta-lactamase-like protein [Truepera radiovictrix DSM 17093] gi|297166008|gb|ADI15719.1| beta-lactamase-like protein [Truepera radiovictrix DSM 17093] Length = 262 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 98/281 (34%), Gaps = 31/281 (11%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIV 58 M LG S GVPR C N RTR S+ I V++ Sbjct: 1 MPSGPTLRFLGAADSQGVPRWWCACSVCRDARGGGVNARTRPSVLIE------GPERVLI 54 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D P+ +Q RE + A L TH H DH+ G+ L + +YA + M+ L Sbjct: 55 DAAPELRLQASREGLTGFSAALITHAHNDHVLGLGDLADWSRWTGARCPIYAPREVMEAL 114 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFR 177 F Y +Y + +E+ + HG + GFR Sbjct: 115 AARFPYL----QTASYRARTPLLALEDAACSRTFAGY----RVSALRVPHGFNGFAYGFR 166 Query: 178 F----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKKIE 228 F G Y D L + L L++ A S + + E+L + Sbjct: 167 FEGPGGAWGYLPDCLDLAD--LAPWRGLKLLVLGASFFREAAPKAGRSVYDVQEALALLA 224 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 + PK A+LTH+ +D + P V A DG+ P Sbjct: 225 ELKPKRALLTHLGHGVD---ARQGAPDGVQYARDGLVVPLP 262 >gi|325190433|emb|CCA24935.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 340 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 49/310 (15%) Query: 3 DYYHFTILGCGASLGVPRITG----DWGACDPT--NP--KNRRTRSSLKISRVSERGSNT 54 +LGCG S VP + + C NP N R S+ I S G+ Sbjct: 36 SRMEVHVLGCGPSSSVPSMRCLLSSECNVCKEAYENPTSMNHRLNPSILIRVKSGNGT-R 94 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPI-- 106 +++D G F LR Q+ +IDA++ TH HAD + G+D LR F + PI Sbjct: 95 NILIDCGKTFRQAALRLFPKLQIDTIDAIILTHDHADAVLGLDDLREVQPFRVEIDPITK 154 Query: 107 ----------DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 V+ + + + F Y ++ + I + + + Sbjct: 155 ESCNVSSGALPVFCNEETQQGIETKFPYLCQSENTSAR----WVAQINFSLFQPLIPFSV 210 Query: 157 GVIEAIPILQQHGR-ISSLGFRFG-----NVAYCTDVNAFPAESLEKL----QNLDFLII 206 + +P+ HG + G+ FG Y +DV+ P ++++ L +++DFL+I Sbjct: 211 CGYDFVPLPVLHGDDYYAFGYVFGFEVNKCFVYISDVSHVPPQTMQYLVERKESIDFLMI 270 Query: 207 DALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM---VLKSTPS----RVV 258 DAL H++H +L + + + PK LT M D DY+ V++ P +V Sbjct: 271 DALNTERRHNTHMNLPAVINLVLELRPKQTYLTGMSHDFDYNKTNAVIRDLPKLDNLKVE 330 Query: 259 PAFDGMQFSS 268 A+DG+ S Sbjct: 331 MAYDGLFISL 340 >gi|260885874|ref|ZP_05736054.2| lipoate-protein ligase B [Prevotella tannerae ATCC 51259] gi|260851364|gb|EEX71233.1| lipoate-protein ligase B [Prevotella tannerae ATCC 51259] Length = 195 Score = 209 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L +DAVL TH H DH+ G+D LR + + + +YA + +++ YCF+ Sbjct: 1 MLNRPFKPLDAVLLTHLHYDHVGGLDDLRPFSFR--SSLPIYANQVTARSIYDHMPYCFQ 58 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + P + +V A + +P+L HG++ LGFR G+ AY TD+ Sbjct: 59 SHAQSIVP------RFKLKEVSAYQPFAVRELVILPLLVMHGKMPILGFRIGSFAYITDM 112 Query: 188 NAFPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIELINPKNAILTHMHVDLD- 245 + P ES + LQ ++ +++AL+ H +H ++ ++L+ I ++P+ L HM + Sbjct: 113 SYLPDESFQLLQGVETFVVNALQIKNTHPTHQNIPQALQLIAKLSPRQTYLIHMSHNAGF 172 Query: 246 YDMVLKSTPSRVVPAFDGMQF 266 + P V A+DG++ Sbjct: 173 HADSSNFLPPNVAFAYDGLEI 193 >gi|289525421|emb|CBJ14898.1| metal-dependent hydrolase [Chlamydia trachomatis Sweden2] gi|296434974|gb|ADH17152.1| metal-dependent hydrolase [Chlamydia trachomatis E/150] gi|296438694|gb|ADH20847.1| metal-dependent hydrolase [Chlamydia trachomatis E/11023] Length = 275 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 22/277 (7%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G S G+P C + R RSS+ + I+DTG Sbjct: 5 SSSGRIVFLGTGDSEGIPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KNFIIDTG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD Q+LR +V +D V THPH DHI GID LR +++ + + + +L ++ Sbjct: 58 PDLRTQLLRYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKT 117 Query: 122 FRYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + K + + + ++ N+ + G + Q+ G+RFG+ Sbjct: 118 KEHLVQKETPNNSLAASLRYTIL--NEKCGEQEFLGIPFTYVSYFQK--NCQVTGYRFGD 173 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH---SSHFSLSESLKKIELINPK 233 +AY TD++ + + ++ LQ ++ +I+ A L SH +L ++ +E + Sbjct: 174 LAYLTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGAS 233 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 ++TH+ L + ++ K A+DGM+ I Sbjct: 234 RLVITHVSHYL-HKVLEKDVTR--ECAYDGMELLLDI 267 >gi|4263048|gb|AAD15317.1| putative hydrolase [Arabidopsis thaliana] gi|7270684|emb|CAB77846.1| putative hydrolase [Arabidopsis thaliana] Length = 290 Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 71/285 (24%), Positives = 113/285 (39%), Gaps = 44/285 (15%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS- 48 D LG G S VP C P N R +SL I S Sbjct: 9 DGTALIFLGTGCSGAVPDFRCLLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCSK 68 Query: 49 -ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----Q 102 E G + +++D G F Q ++ TH HAD +HG+D +R + Sbjct: 69 EEDGRHKYILIDVGKSFREQ-----------IILTHEHADAVHGLDEIRSLQPRGATIVD 117 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ V+ + M+ + F Y + + P V+ + +N + A + Sbjct: 118 TDPLPVFLSQFTMESIATRFPYLVEK-KVKEVPRRVSLLDWKNIEENCDEPFAASGLSFT 176 Query: 163 PILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDA---LK 210 P+ HG +LGF FG+ VAY +DV+ P + + LD LI+D K Sbjct: 177 PLPVMHGEDYIALGFLFGDKSKVAYISDVSRIPPSTEYAISKAGAGQLDLLILDTNIPWK 236 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 G H +H +E+L+ ++ + PK A+LT M + D+ + Sbjct: 237 RGPHPTHICFTEALEILKRLCPKRALLTGMTHEFDHHEYNEILAE 281 >gi|15605104|ref|NP_219889.1| metal-dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76789110|ref|YP_328196.1| metal-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|237804726|ref|YP_002888880.1| metal-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|255348745|ref|ZP_05380752.1| metal-dependent hydrolase [Chlamydia trachomatis 70] gi|255503285|ref|ZP_05381675.1| metal-dependent hydrolase [Chlamydia trachomatis 70s] gi|255506963|ref|ZP_05382602.1| metal-dependent hydrolase [Chlamydia trachomatis D(s)2923] gi|3328805|gb|AAC67976.1| predicted metal dependent hydrolase (histidinic triad) [Chlamydia trachomatis D/UW-3/CX] gi|76167640|gb|AAX50648.1| metal-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|231273026|emb|CAX09939.1| metal-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|296435900|gb|ADH18074.1| metal-dependent hydrolase [Chlamydia trachomatis G/9768] gi|296436826|gb|ADH18996.1| metal-dependent hydrolase [Chlamydia trachomatis G/11222] gi|296437760|gb|ADH19921.1| metal-dependent hydrolase [Chlamydia trachomatis G/11074] gi|297140260|gb|ADH97018.1| metal-dependent hydrolase [Chlamydia trachomatis G/9301] gi|297748510|gb|ADI51056.1| Metal-dependent hydrolase [Chlamydia trachomatis D-EC] gi|297749390|gb|ADI52068.1| Metal-dependent hydrolase [Chlamydia trachomatis D-LC] Length = 266 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G S G+P C + R RSS+ + I+DTG Sbjct: 5 SSSGKIVFLGTGDSEGIPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KNFIIDTG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD Q+LR +V +D V THPH DHI GID LR +++ + + + +L ++ Sbjct: 58 PDLRTQLLRYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKT 117 Query: 122 FRYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + K + + + ++ N+ + G + Q+ G+RFG+ Sbjct: 118 KEHLVQKETPNNSLAASLRYTIL--NEKCGEQEFLGIPFTYVSYFQK--NCQVTGYRFGD 173 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH---SSHFSLSESLKKIELINPK 233 +AY TD++ + + ++ LQ ++ +I+ A L SH +L ++ +E + Sbjct: 174 LAYLTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGAS 233 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++TH+ L + ++ K A+DGM+ Sbjct: 234 RLVITHVSHYL-HKVLEKDVTR--ECAYDGMEL 263 >gi|255311186|ref|ZP_05353756.1| metal-dependent hydrolase [Chlamydia trachomatis 6276] gi|255317487|ref|ZP_05358733.1| metal-dependent hydrolase [Chlamydia trachomatis 6276s] Length = 266 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G S G+P C + R RSS+ + I+DTG Sbjct: 5 SSSGKIVFLGTGDSEGIPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KNFIIDTG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD Q+LR +V +D V THPH DHI GID LR +++ + + + +L ++ Sbjct: 58 PDLRTQLLRYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKT 117 Query: 122 FRYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + K + + + ++ N+ + G + Q+ G+RFG+ Sbjct: 118 KEHLVQKETPNNSLAASLRYTIL--NEKCGEQEFLGIPFTYVSYFQK--NCQVTGYRFGD 173 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH---SSHFSLSESLKKIELINPK 233 +AY TD++ + + ++ LQ ++ +I+ A L SH +L ++ +E + Sbjct: 174 LAYLTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRMPSHLTLEQADLLMEKVGAS 233 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++TH+ L + ++ K A+DGM+ Sbjct: 234 RLVITHVSHYL-HKVLEKDVTR--ECAYDGMEL 263 >gi|304404461|ref|ZP_07386122.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304346268|gb|EFM12101.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 258 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 102/276 (36%), Gaps = 35/276 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G G S+GVPR+ D C +NRR RSSL+I + +D GPD+ Sbjct: 4 LTFAGTGDSMGVPRVYCDCEVCQEARESGENRRYRSSLRIE----DQTFGCTWIDCGPDW 59 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q+ D +L TH H DHI G+ R YA + + + F + Sbjct: 60 GKQMEAAGQRFPDRILITHAHFDHIGGMVEWADACRWLGRRGMAYAPNEVIAEILNRFPW 119 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN--- 180 +D P+ G HG+ S FRF Sbjct: 120 LGNQIDFH----------------PLDDGITIGDWSVFAWKVCHGKNGYSYAFRFDQQCT 163 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SSHFSLSESLKKIELINP 232 AYC+D A + ++ L+ LD LI+ S + + E+L +E + P Sbjct: 164 GKAWAYCSDAIALTEDQIKPLRGLDLLILGTSFYEEPFEFSTRSLYDVKEALTLVEDLRP 223 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 TH+ D+D PS++ A GMQ Sbjct: 224 VQTCFTHLSHDIDLRR-SYGLPSQIRFARTGMQIEV 258 >gi|237802804|ref|YP_002887998.1| metal-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|231274038|emb|CAX10832.1| metal-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] Length = 266 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G S G+P C + R RSS+ + I+DTG Sbjct: 5 SSSGKIVFLGTGDSEGIPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KNFIIDTG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD Q+LR +V +D V THPH DHI GID LR +++ + + + +L ++ Sbjct: 58 PDLRTQLLRYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKT 117 Query: 122 FRYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + K + + + ++ N+ + G + Q+ G+RFG+ Sbjct: 118 KEHLVRKETPNNSLAASLRYTIL--NEKCGEQEFLGIPFTYVSYFQK--NCQVTGYRFGD 173 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH---SSHFSLSESLKKIELINPK 233 +AY TD++ + + ++ LQ ++ +I+ A L SH +L ++ +E + Sbjct: 174 LAYLTDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGAS 233 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++TH+ L + ++ K A+DGM+ Sbjct: 234 RLVITHVSHYL-HKVLEKDVTR--ECAYDGMEL 263 >gi|21226955|ref|NP_632877.1| hypothetical protein MM_0853 [Methanosarcina mazei Go1] gi|20905267|gb|AAM30549.1| conserved protein [Methanosarcina mazei Go1] Length = 246 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 32/271 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G ++G P+I + AC K++R R S+ + +++DT P Sbjct: 1 MRLTLLGTGDAVGTPKIGCNCPACTDAREGGKSQRLRFSILVE-----SGQGKILIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q LR+++ IDAV++TH H DH G F + + +DVY + + ++ + Sbjct: 56 DLRQQFLRQKLSGIDAVIWTHGHYDHYAGFGE----FYRVQNKVDVYGVCETLDYIDQ-- 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y Y + P + I ++ + P+ G + G V Sbjct: 110 -YVSFLKPRYHYVKLYEPFEL------IGLEFTLFKVHHPPVEVPTGVVIRDGDT--KVV 160 Query: 183 YCTDVN-AFPAESLEKLQNLDFLIIDALKNGLH---SSHFSLSESLKKIELINPKNAILT 238 D + P SLE +++ D LI DA+ H H + E++ + +N K +LT Sbjct: 161 VTGDTSPDIPENSLELMKDPDLLIADAIVP-PHIHIKKHMNSEEAMALAQKLNAKEVVLT 219 Query: 239 HMHVDL-DYDMVLKSTPSRVVPAFDGMQFSS 268 H+ + + P +DG F Sbjct: 220 HLSHLFRPHHIESMFLP----LGYDGQVFEF 246 >gi|73668074|ref|YP_304089.1| ATP-binding protein PhnP [Methanosarcina barkeri str. Fusaro] gi|72395236|gb|AAZ69509.1| ATP-binding protein PhnP [Methanosarcina barkeri str. Fusaro] Length = 246 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 30/270 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G ++G P+I + AC+ K++R R S+ + +++DT P Sbjct: 1 MRLTLLGTGDAVGTPKIGCNCPACEDARKGGKSQRLRFSILVE-----SDKGKILIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q L++ + +D V++TH H DH G F + + +DVY + ++++ + Sbjct: 56 DLRQQFLKQNLSCVDGVIWTHGHYDHYSGFGE----FYRVQNKVDVYGVQENIEYINQ-- 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y + Y + P + I ++ + P+ G I G + V Sbjct: 110 -YVYFLKPRYHYVKLYEPFDL------IGLQFTLFKVNHPPVEVPTGVIIREGDK--KVV 160 Query: 183 YCTDVN-AFPAESLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESLKKIELINPKNAILTH 239 D N P SLE ++N D LI DA+ +H H + E++ E +N K L H Sbjct: 161 ITGDTNSEIPEASLELMENPDLLIADAIVPPNIHIKKHMNSEEAMALAEQLNAKKIALIH 220 Query: 240 MHVDL-DYDMVLKSTPSRVVPAFDGMQFSS 268 + + + P +DG F Sbjct: 221 LSHLFRPHHIESLFLP----LGYDGQVFEF 246 >gi|255584503|ref|XP_002532980.1| catalytic, putative [Ricinus communis] gi|223527244|gb|EEF29404.1| catalytic, putative [Ricinus communis] Length = 294 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 121/294 (41%), Gaps = 50/294 (17%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGS-NTTVIVDTGPDFYM 66 LG G S VP +SL I SE + +++D G F Sbjct: 20 IFLGTGCSSAVPNAMC---------------NTSLLIDYYSESDEKHKYILIDVGKTFRE 64 Query: 67 QVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHL 118 QVLR ++ +D+++ TH HAD + G+D +R P +Y + M + Sbjct: 65 QVLRWFTFHKIPLVDSIILTHEHADAVLGLDDIRAVQPFSPTNDIDPTSIYLSQFAMDSI 124 Query: 119 FESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-IS 172 F Y K + R + I+ E++ P ++ +P+ HG Sbjct: 125 AVKFPYLVKKKLKEGQEVRRVAQLDWQIIEEDSQRPFVTSG----LKFVPLPVMHGEDYI 180 Query: 173 SLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDAL-KNGLHSSHFSLSES 223 SLGF FG VAY +D++ FPA + + LD LI+D L K G H++HF ++ Sbjct: 181 SLGFLFGEKSRVAYISDISRFPASTEYVISKAGAGQLDLLILDTLYKTGSHNTHFCFPQT 240 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPAFDGMQFSSPI 270 L+ ++ + PK A+L M + D+ V A DGM+ + Sbjct: 241 LEAVKRLCPKRALLIGMTHEFDHHKDNDFLMEWSKREGIPVQLAHDGMRVPIDL 294 >gi|253576574|ref|ZP_04853902.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251843988|gb|EES72008.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 260 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 102/270 (37%), Gaps = 23/270 (8%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +G G ++GVPR+ D C NRR R+ + + G ++D GPD Sbjct: 3 RLEFIGTGDAMGVPRVYCDCEVCGEARSSGVNRRYRALVAVE-----GEEGGFLIDCGPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + + R + +L TH H DHI G+ R +YA + + + F Sbjct: 58 WRSGMERRGQRFAEQILITHAHFDHIGGLPEWADACRWLGRRGQLYAPQEVLDTILRQFP 117 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 + LD ++ + E + SA V R+ GF AY Sbjct: 118 WLGSHLD-------LHAVGAEGTRLARWQISAWKVFHGKNGFSYAYRLEKDGF---TWAY 167 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELINPKNAILT 238 C+D A P + + L LD L++ S + + E+L+ + I P + T Sbjct: 168 CSDSIALPEDQKQPLFGLDLLVLGTSFYHETAEFTTRSVYDVKEALELLNEIRPTRTVFT 227 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+ D+D P V A GMQ S Sbjct: 228 HLSHDIDLRR-DYGLPEGVEFAVTGMQMSL 256 >gi|20092858|ref|NP_618933.1| ATP-binding protein PhnP [Methanosarcina acetivorans C2A] gi|19918162|gb|AAM07413.1| ATP-binding protein PhnP [Methanosarcina acetivorans C2A] Length = 246 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 32/271 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G ++G P+I + AC K++R R S+ + +++DT P Sbjct: 1 MRLTLLGTGDAVGTPKIGCNCPACADARKGGKSQRLRFSILVE-----SDQGKILIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q LR+++ ID V++TH H DH G F + + +DVY + + ++ Sbjct: 56 DLRQQFLRQRLSGIDGVIWTHGHYDHYAGFGE----FYRVQNKVDVYGIQETLDYIDR-- 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y Y + P + I ++ + P+ G + G V Sbjct: 110 -YVSFLKPRYHYVKLYEPFDL------IGLEFTLFKVSHPPVENPAGVVIREG--GTKVV 160 Query: 183 YCTDVN-AFPAESLEKLQNLDFLIIDALKNGLH---SSHFSLSESLKKIELINPKNAILT 238 D N P +SLE +++ D LI DA+ H H + E++ + ++ K +LT Sbjct: 161 ITGDTNPDIPEKSLELMKDPDLLIADAIVP-PHIHIKKHMNSEEAMALAQKLDAKKVVLT 219 Query: 239 HMHVDL-DYDMVLKSTPSRVVPAFDGMQFSS 268 H+ + + P +DG F Sbjct: 220 HLSHLFRPHHIESMFLP----LGYDGQVFEF 246 >gi|255581242|ref|XP_002531433.1| catalytic, putative [Ricinus communis] gi|223528952|gb|EEF30945.1| catalytic, putative [Ricinus communis] Length = 303 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 76/294 (25%), Positives = 125/294 (42%), Gaps = 41/294 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G S T W N K R +SL I + + +++D G Sbjct: 16 RSALIFLGTGNSN-----THIWLLRIFRNEKL-RCNTSLLIDYYQSKEEHKYILIDVGKT 69 Query: 64 FYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCM 115 F QVLR ++ +D+++ TH HAD + G+D +R PI VY + M Sbjct: 70 FREQVLRWFTFHKIPRVDSIVLTHEHADAVLGLDDVRAVQGFSPTNDTDPIPVYLSQFSM 129 Query: 116 KHLFESFRYC----FKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQHGR 170 + F Y + + + ++ ++I E+ P ++ IP+ HG+ Sbjct: 130 DSVALRFPYLTKKRLREGEKKKRVAQLDWMIIEEDCQRPFVASG----LQFIPLPVMHGK 185 Query: 171 -ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKN--GLHSSHFS 219 LGF FG VAY +DV+ FP + + LD LI++A + G +HF Sbjct: 186 DYIYLGFLFGKKSRVAYISDVSRFPESTEYVISKAGAGQLDLLILEASRKSGGPGGAHFC 245 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPAFDGMQF 266 LS++L+ ++ + PK A+LT M + D+ + V A DG++ Sbjct: 246 LSQTLEALKRLYPKQALLTGMGHEFDHYKDNEFLAEWSKREGIPVQLAHDGLRI 299 >gi|255638562|gb|ACU19588.1| unknown [Glycine max] Length = 308 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 122/308 (39%), Gaps = 48/308 (15%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERG-S 52 LG G VP + C P N R +SL I S+ + Sbjct: 5 LIFLGTGVWGTVPSMRCLIDPSDPPCLVCTQSLSLPPHLNPNYRCNTSLLIDYYSQSDAT 64 Query: 53 NTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKR 104 + +++D G F VLR + ID++L TH HAD + G+D +R Sbjct: 65 HKYILIDAGKTFRETVLRWFVFHHIPRIDSILLTHEHADAVLGLDDIRAVQPFSPTNDID 124 Query: 105 PIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P +Y M + + F Y + + R I+ ++ ++P + Sbjct: 125 PTPIYLTQHSMDSMEKVFPYLVQKKHKEGQEIRRVAQCCWNIIADDCNLPFSASG----L 180 Query: 160 EAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDALK 210 + IP+ HG LGF FG VAY +DV+ PA + + LD LI+D LK Sbjct: 181 KFIPLPVMHGEDYICLGFLFGEKDRVAYISDVSRIPASTEYVISKSGAGQLDLLILDTLK 240 Query: 211 N-GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPAFD 262 G H+ HF L ++L+ ++ + PK +L M + D+ + V A D Sbjct: 241 KTGSHNVHFCLPQALETVKRLCPKQTLLIGMTHEFDHHKDNEFLMDWSRREGLLVQLAHD 300 Query: 263 GMQFSSPI 270 G++ + Sbjct: 301 GLRVPINL 308 >gi|315649092|ref|ZP_07902185.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315275527|gb|EFU38882.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 261 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 99/274 (36%), Gaps = 38/274 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++GVPR+ D C NRR RSS+ + + ++D GPD+ Sbjct: 8 LTFLGTGDAMGVPRVYCDCEVCTEARNTGVNRRLRSSVMVEC-----GEASFMIDCGPDW 62 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + +L TH H DHI G+ +YA D ++ + + + Sbjct: 63 RFMMEGLGKRKMRDMLITHAHFDHIGGLPEWSDACRWLGEKGRLYAPADVLEQIVRQYPW 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN--- 180 P +E V + G I HG+ S +R Sbjct: 123 L--------------PRQMEMTAVDDGITLGGWEISCW--KVNHGKNGYSYAYRLQKGEY 166 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIELINPKN 234 Y +D E L+ LD L++ S + + E+ + + +NP+ Sbjct: 167 TWVYNSDSINLSPAEKEPLKGLDLLVLGTSFVHETAIFESRSVYDMKEAAQLLSEVNPRQ 226 Query: 235 AILTHMHVDLDYDMVLKSTP--SRVVPAFDGMQF 266 I THM D+D V K P V A GM Sbjct: 227 TIYTHMSHDVD---VRKELPLSEGVSVAMTGMTV 257 >gi|15835274|ref|NP_297033.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] gi|270285447|ref|ZP_06194841.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] gi|270289458|ref|ZP_06195760.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Weiss] gi|301336844|ref|ZP_07225046.1| hydrolase, metal-dependent, putative [Chlamydia muridarum MopnTet14] gi|8163281|gb|AAF73585.1| hydrolase, metal-dependent, putative [Chlamydia muridarum Nigg] Length = 266 Score = 204 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G G P C + R RSS+ + + I+DTG Sbjct: 5 SSSGKVIFLGTGDPEGTPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KSFIIDTG 57 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD Q+LR ++ +D V THPH DHI GID LR +++ + P+ V + +L ++ Sbjct: 58 PDLRTQLLRYKIHRLDGVFLTHPHYDHIGGIDDLRSWYITRLEPVPVVLSSFTYDYLCKT 117 Query: 122 FRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 ++ + D + + ++ C + + + + G+RFG+ Sbjct: 118 KKHLIQDPSLDNSLAASLRYTILNEQ----CGEYEFLGVPFMYVSYFQRNCQVTGYRFGD 173 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPK 233 +AY TD++ + L+ L+ ++ ++I A SH +L ++ ++ I Sbjct: 174 LAYLTDMSHYDDRILDYLKGVNTVVISASLGSLPKAFGRRSPSHLTLEQADLLMDKIGAS 233 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++TH+ L VL+ P+R A+DGM+ Sbjct: 234 RLVITHVSHYL--HKVLEQDPTR-ECAYDGMEL 263 >gi|294494876|ref|YP_003541369.1| beta-lactamase [Methanohalophilus mahii DSM 5219] gi|292665875|gb|ADE35724.1| beta-lactamase domain protein [Methanohalophilus mahii DSM 5219] Length = 248 Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 32/270 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + G P I + C K+ R R S+ + T+++DTGP Sbjct: 1 MKVTLLGTGDAPGTPIIGCNCLTCQDGLKGGKSNRLRCSILVE-----SEKGTILLDTGP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L + +D V++TH H DH G F + +R +DVY + + ++ E Sbjct: 56 DLRQQLLEHNIKHVDGVIWTHGHYDHFTGFGE----FHRVQRKVDVYGLAETLDYILEYL 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + P N + I I ++ ++ P+ G I + V Sbjct: 112 AFL---------RPRRNNVKINETFEIIGLRITLFEVKHRPVSNPVGVIIEENGK--KVV 160 Query: 183 YCTDVNA-FPAESLEKLQNLDFLIIDALKNGL---H-SSHFSLSESLKKIELINPKNAIL 237 + D P +SLE + + D LI DA+ H H ++L+ + I K + Sbjct: 161 FTGDCERQIPQKSLEMIDSPDLLIADAIVPDSDVLHIKKHMDAKDALELAQKIKAKEVVF 220 Query: 238 THMHVDL-DYDMVLKSTPSRVVPAFDGMQF 266 TH+ + + + P +DGMQF Sbjct: 221 THISHFFKPHSIAAQEFPMG----YDGMQF 246 >gi|91773893|ref|YP_566585.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242] gi|91712908|gb|ABE52835.1| protein with beta-lactamase-like domain [Methanococcoides burtonii DSM 6242] Length = 248 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 30/269 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + G P I D C K+ R R S+ I V++DT P Sbjct: 1 MKITLLGTGDAPGTPIIGCDCPTCIDATKGTKSNRLRFSILIE-----SDEGKVLIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+LR+ + ID V++TH H DH G F + + +DVY + + ++ + Sbjct: 56 DMREQMLRKGLKHIDGVIWTHGHYDHYTGFGE----FHRVQYNVDVYGVTETLDYILDYV 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + P + I + + I ++ + P + G + G + ++ Sbjct: 112 SFL---------RPKRHDIPLNTSFELIGLEFTLFEVNHPPAKKAVGVMICEGDKKVVIS 162 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLH-SSHFSLSESLKKIELINPKNAILT 238 TD N P +S+E +Q+ D I+DA+ G H H E+++ E IN K ++T Sbjct: 163 GDTDEN-IPEKSIEIIQSPDIFIVDAIIPHDVGFHVKKHMDAKEAMEIAEKINAKRVVMT 221 Query: 239 HMHVDL-DYDMVLKSTPSRVVPAFDGMQF 266 H+ +D +K+ P +DGM+ Sbjct: 222 HISHYFKPHDEAVKTYP----LGYDGMEL 246 >gi|166154590|ref|YP_001654708.1| metal-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|166155465|ref|YP_001653720.1| metal-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335857|ref|ZP_07224101.1| metal-dependent hydrolase [Chlamydia trachomatis L2tet1] gi|165930578|emb|CAP04075.1| metal-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|165931453|emb|CAP07029.1| metal-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 266 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 22/269 (8%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G G+P C + R RSS+ + I+DTGPD Sbjct: 9 KIVFLGTGDPEGIPVPFCSCEVCS--QGRICRLRSSVWVQSQG-----KNFIIDTGPDLR 61 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+LR +V +D V THPH DHI GID LR +++ + + + +L ++ + Sbjct: 62 TQLLRYRVPRLDGVFLTHPHYDHIGGIDDLRSWYITHLESVPIILSSFTYDYLCKTKEHL 121 Query: 126 F-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 K + + + ++ N+ + G + Q+ G+RFG++AY Sbjct: 122 VQKETPNNSLAASLRYTIL--NEKCGEQEFLGIPFTYVSYFQK--NCQVTGYRFGDLAYL 177 Query: 185 TDVNAFPAESLEKLQNLDFLIIDA----LKNGLH---SSHFSLSESLKKIELINPKNAIL 237 TD++ + + ++ LQ ++ +I+ A L SH +L ++ +E + ++ Sbjct: 178 TDMSHYDEQIVDYLQGVNTIIVSASLGVLPKAFGSRTPSHLTLEQADLLMEKVGASRLVI 237 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 TH+ L + ++ K A+DGM+ Sbjct: 238 THVSHYL-HKVLEKDVTR--ECAYDGMEL 263 >gi|301122785|ref|XP_002909119.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099881|gb|EEY57933.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 312 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 120/315 (38%), Gaps = 53/315 (16%) Query: 5 YHFTILGCGASLGVPRITG----DWGACDPT----NPKNRRTRSSLKISRVSERGSNTTV 56 +LGCG S VP + C + KNRR SL + ++ ++ V Sbjct: 1 MEVVVLGCGPSSSVPSMRCVLSKHCAVCHEAHANPDSKNRRLNPSLLVRNLN---TDKNV 57 Query: 57 IVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------- 104 ++D G F LR V ++ +++ TH HAD + G+D LR + Sbjct: 58 LIDCGKTFREAALRIFPQIGVSAVHSLVLTHDHADALLGMDDLREVQATVETVDPVTKEL 117 Query: 105 -PID-----VYAAPDCMKHLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMK 153 I V+ + + F Y + P ++ + Sbjct: 118 YKIPPEAMKVHCSEPTSHDVISKFPYLIDNEPLPPPGETVPKPFRWTAKLQIDTFNPWEP 177 Query: 154 SAGGVIEAIPILQQHG-RISSLGFRFG-----NVAYCTDVNAFPAESLEKLQN-----LD 202 I+ +P HG +S GF FG Y +DV+ P E+ L + +D Sbjct: 178 FVACGIKFLPFPVIHGAGYTSFGFEFGYEVGARFVYISDVSEIPEETRSFLNDTSKPPVD 237 Query: 203 FLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS------ 255 L+IDAL + HS+H +L + +++I PK +LT M D DY P Sbjct: 238 LLLIDALYLDKYHSTHMNLQKVMEEIATFKPKRTLLTGMSHDFDYPKHSVELPKMGEEKG 297 Query: 256 -RVVPAFDGMQFSSP 269 + +DG++ + P Sbjct: 298 LNIEMTYDGLRIAFP 312 >gi|219123117|ref|XP_002181877.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406478|gb|EEC46417.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 372 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 125/334 (37%), Gaps = 70/334 (20%) Query: 3 DYYHFTILGCGASLGVPRITGD---------------------------WGAC------D 29 LG G+S G PR D Sbjct: 39 SRSRIVFLGTGSSTGCPRPLCPMIFQPNQSKKQEETTETKAMKERLAPFCKVSNLAIEGD 98 Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPH 85 P KN R SL I + G V++D G F LR + S+DAV+ TH H Sbjct: 99 PKTNKNYRNNPSLVI-AFDDNGVQKHVLIDCGKTFREGALRWFPTLGINSLDAVVLTHEH 157 Query: 86 ADHIHGIDGLRGYFLK----------QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 AD G+D +RG+ ++ P+ +Y + C+ + E F + F L R Sbjct: 158 ADAAFGLDDVRGFQRTEGGFAGNSQFRQVPMPLYVSQQCLNEIAERFPWLFPELQSRADI 217 Query: 136 PIVNPIVIENNDVPICMK-------SAGGVIEAIPILQQHGR-ISSLGFRF----GNVAY 183 +V+ V++ + + + +E IP+ HG + S G+ F NV Y Sbjct: 218 ALVDKAVVKRHVASLDVHVMEPFKAVNIEGLEIIPLPVMHGEDLVSFGYAFTVGQTNVVY 277 Query: 184 CTDVNAFPAESLEKLQNL----DFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILT 238 +D++ E+L + D L++DAL + HFSL+ +L + I P+ + Sbjct: 278 LSDISRMLPETLAFISKSRPPTDILVVDALHPTRDNPVHFSLNYALNLVNEIKPRRTFVV 337 Query: 239 HMHVD--LDYDMVLKSTPS---RVVPAFDGMQFS 267 M+ D L +D K + A+DG Sbjct: 338 GMNCDSFLPHDQANKDLRDSYVNIQLAYDGQVVE 371 >gi|170085423|ref|XP_001873935.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651487|gb|EDR15727.1| predicted protein [Laccaria bicolor S238N-H82] Length = 357 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 114/295 (38%), Gaps = 46/295 (15%) Query: 2 KDYYHFTILGCGASLGVPRITG----------DWGAC----DPTNPKNRRTRSSLKISRV 47 LG G S +P I C P KN R +S I Sbjct: 5 SQPIELIFLGTGTSASLPHIECLTALPGDETPPCKTCLSTQTPEGKKNIRRNTSATIRMA 64 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-- 101 + G TV++D G +F L Q+ IDA+L TH HAD ++G+D LRG+ L+ Sbjct: 65 DKNGLPVTVVIDAGKNFQAAALEWFPKYQLRRIDALLITHAHADAMNGLDDLRGWTLRSA 124 Query: 102 QKRPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + IDVY + D + SF Y F + P +I ++ V + + G Sbjct: 125 IQDHIDVYVSQDTFTEVQRSFPYLVAKEFASGGGDESVPEFKWHIISDS-VSFEIGNTGI 183 Query: 158 VIE-----AIPILQQHGRI-----------SSLGFRFGN-VAYCTDVNAFPAESLEKLQN 200 I I I HGR+ S GF+ N + Y +DV+ P ++ Sbjct: 184 HITPFAGKFINISFHHGRVFSEGKETIYPYLSFGFKIQNHIVYISDVSHIPDNVWPMIEP 243 Query: 201 LD----FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 D ++D L+ H SH L+ S+ I LT ++ ++ +K Sbjct: 244 SDGPIPVAVLDCLRLQPHPSHVGLAGSIALARRIKATKTYLTGFGHEVSHEEYVK 298 >gi|95928892|ref|ZP_01311638.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95135237|gb|EAT16890.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 273 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 114/280 (40%), Gaps = 36/280 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGP 62 F ILG GA GVP D C +R RTRS + R N ++DT P Sbjct: 3 SSFKILGSGAGPGVPSFFCDCSGCREARANSRYCRTRSGALL-----RSGNANYLIDTSP 57 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFES 121 D Q++RE + ID + TH H DH G+ + Y L +K PI +Y P + + Sbjct: 58 DLRAQLVRENLEGIDGIFLTHWHFDHFGGLGEMEYYVKLDRKEPIPLYLPPSAVDSFHAA 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 F Y V+ G + + HG I + GF Sbjct: 118 FPYLHD--------------VLVPQPWEFGKTYKRGDVGITALPANHG-IETAGFLIESD 162 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKN 234 +AY D + P + +++ +D LI DA N SH S++E+++ + I KN Sbjct: 163 VSRLAYFPDTSGLPDVTKRQVEAIDCLICDATFSDSNWFPDSHMSIAEAIELGKSIGAKN 222 Query: 235 AILTHMHVDLDYDMVLKSTP------SRVVPAFDGMQFSS 268 +LTH+ + + ++ V A DGMQF+ Sbjct: 223 TVLTHLAIHYGNPVTVEELNGRLSDLPNVFLAHDGMQFNL 262 >gi|242075726|ref|XP_002447799.1| hypothetical protein SORBIDRAFT_06g015970 [Sorghum bicolor] gi|241938982|gb|EES12127.1| hypothetical protein SORBIDRAFT_06g015970 [Sorghum bicolor] Length = 335 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 120/301 (39%), Gaps = 53/301 (17%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S +P C P N R +SL I + ++ Sbjct: 43 LIFLGTGCSGALPDTRCLLKPSTPPCDVCSMGVSLPPERNPNYRLNTSLLIDYCHDE-TH 101 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---- 105 +++D G F QVLR +V S+D+++ TH HAD + G+D + + R Sbjct: 102 KYILIDIGKTFREQVLRWFVHHKVPSVDSIILTHEHADAVLGLDEVWVVQPRNGRNDIEQ 161 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGGVIEA 161 I ++ M + F Y + + ++ +IE+ DV ++G +E Sbjct: 162 IPIFLTQFTMDSISRRFPYLIEQKPEDGDEDAQAAKIDWKIIED-DVDKPFVASG--LEF 218 Query: 162 IPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNG 212 +P+ HG LGF FG VAY +DV+ F ++ + LD LI++A N Sbjct: 219 MPLPVMHGEGYLCLGFLFGRRSRVAYLSDVSRFLPKTEHVISKSGAGQLDLLILEA--NA 276 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPAFDGMQ 265 LH SL I+ I PK A+L M ++ + V A DG++ Sbjct: 277 LHGV------SLDAIKRIRPKRALLIGMRHFFEHQRENQMLAEWSIREGIPVQLAHDGLR 330 Query: 266 F 266 Sbjct: 331 I 331 >gi|251796652|ref|YP_003011383.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247544278|gb|ACT01297.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 260 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 107/278 (38%), Gaps = 35/278 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T G G ++GVPR+ D C NRR R + S T+++D GP Sbjct: 2 ITITFRGTGDAMGVPRVYCDCEVCSEARTGGANRRYR--ALVQLDSPD--FGTMMIDCGP 57 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D+ Q+ + ++ +L TH H DHI G+ + YA + + + + F Sbjct: 58 DWGKQMESAGLRFVNRILVTHAHFDHIGGLPEWADACRWLGVKGEAYAPSEVIAEILQRF 117 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG-- 179 + + + VPI G E + HG+ + FRF Sbjct: 118 PWLGRNIAF----------------VPIDQPCTFGNWEVLAWKVNHGKNGYAYAFRFDQK 161 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SSHFSLSESLKKIELI 230 + AYC+D E + L LD L++ + S + ++E+L+ + + Sbjct: 162 NSGTSWAYCSDSIGLTGEQQKPLFGLDLLVLGTSFYKENFRYETRSVYDVTEALELLPVW 221 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 PK + THM D+D PS A GM+ S Sbjct: 222 GPKKTLFTHMSHDIDLRKTYPM-PSYAEFALTGMEVSV 258 >gi|330508177|ref|YP_004384605.1| metallo-beta-lactamase domain-containing protein [Methanosaeta concilii GP-6] gi|328928985|gb|AEB68787.1| metallo-beta-lactamase domain protein [Methanosaeta concilii GP-6] Length = 247 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 37/272 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G ++G P+I AC ++RR R S+ + E G V+VD+ P Sbjct: 1 MKVTLLGTGDAIGTPKIGCKCPACMDALRGGRSRRMRFSILLESDEEDG---RVLVDSSP 57 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L++ + S+D V++TH H DH G F + + +DVYA + M ++ Sbjct: 58 DLRWQLLKKDIASVDGVIWTHAHYDHYAGFGD----FHRVQSHVDVYALKNTMDYILN-- 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 Y + P+ +DV ++ H I ++G R N Sbjct: 112 -----------YLYFLAPVR---HDVIAGQPFEIAGMQFTLFNVNHPPIETVGVRIDNGS 157 Query: 181 --VAYCTDVN-AFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNA 235 V +D P ESLE +++ D ++ DA+ + S H + E+++ E + K Sbjct: 158 KVVVITSDTKMEVPEESLELMRDADLMLADAITPPGYTISKHMTADEAMELAERLGTKRL 217 Query: 236 ILTHMHV-DLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ ++ LK P D M+ Sbjct: 218 ILTHLSHLYPPHEEALKKWP----LGHDMMEI 245 >gi|327401831|ref|YP_004342670.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317339|gb|AEA47955.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 257 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 33/265 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G S G P I C+ R R S+ I T+++DT PD Sbjct: 1 MRVVLLGTGDSPGTPVIGCHCKTCENARKHGWERKRFSVMIQ-----NKGKTLLIDTSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR V +DAV++TH H DH G F + + + VY++P+ + + + Sbjct: 56 MRAQLLRADVERVDAVIWTHCHYDHFSGFGD----FYRVQSNVVVYSSPEVHEDIGKYME 111 Query: 124 YC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNV 181 + +K ++ +Y P+ MK + P+ + HG + G++ V Sbjct: 112 FIKYKPVEVESYEPLDL----------FGMKVTLIDVNHPPLRRSHGVVVECDGYK---V 158 Query: 182 AYCTDVN-AFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAILT 238 A D N P++SL ++ N D I++AL H + E+L + I K +LT Sbjct: 159 AISGDTNREVPSKSLAEMYNADLFIVEALAPEGYRFRKHMNAVEALSLAKNIGAKRTVLT 218 Query: 239 HMHVDL-DYDMVLKSTPSRVVPAFD 262 H+ + +K P +D Sbjct: 219 HLGHFFPPHSQAVKKYP----VGYD 239 >gi|308068052|ref|YP_003869657.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] gi|305857331|gb|ADM69119.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] Length = 256 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 99/273 (36%), Gaps = 34/273 (12%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G ++GVPR+ D C +N R RSS+ I +E ++D GPD Sbjct: 3 RLIFLGTGDAMGVPRVYCDCLVCTEARTTGENVRLRSSVLIESETE-----NFMIDCGPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + Q+ + I +L TH H DHI G+ +YA + + + F Sbjct: 58 WRRQLELRGLRFIPTILVTHAHFDHIGGLPEWADACRWTGNRGRLYAPQEVIDTILRQFS 117 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN-- 180 + LD +P+ + G HG+ + +R Sbjct: 118 WLSGNLDL----------------IPVDQGAQLGGWNIRGWRVNHGKNGYAYAYRLEKDG 161 Query: 181 --VAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKKIELINPK 233 AYC+D + L NL+ L++ S + + E+ + I + P+ Sbjct: 162 FSWAYCSDSIGLNEAEILPLHNLNLLVLGTSFFHEEAEYATRSVYDMLEAQELIGRLKPE 221 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + I THM D+D + A GM Sbjct: 222 STIFTHMSHDVDV-TRNYGLLEGISLAHTGMSL 253 >gi|23009494|ref|ZP_00050521.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 175 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 1/176 (0%) Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 +R + R + V+A P L + F Y F+ YPPI++ + + P+ + Sbjct: 1 MRPLVIHMHRRVPVHADPLTRALLIQRFGYAFETPPGSAYPPILDLHEMRAGE-PLIIDG 59 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 AGG +EA +HG + GFRFG AY DV+ P + +L+ LD LIIDAL+ H Sbjct: 60 AGGPVEAEAFCMEHGNELAHGFRFGPAAYAPDVSLMPEAAKARLRGLDLLIIDALRETPH 119 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 SH+S+S++L IE + PK AILT++H DLDY + + P VVPA+DG+ + + Sbjct: 120 PSHYSVSDALALIEEVAPKRAILTNLHTDLDYATLARKLPPGVVPAYDGLTATVDL 175 >gi|125545032|gb|EAY91171.1| hypothetical protein OsI_12780 [Oryza sativa Indica Group] Length = 302 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 121/299 (40%), Gaps = 50/299 (16%) Query: 8 TILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSNT 54 LG G S +P C P N R +SL I + G++ Sbjct: 10 IFLGTGCSRTLPNTRCLLRPSAPPCVVCSLGVSLPPEQNPNYRCNTSLLIDYYQDDGTHE 69 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPI 106 +I+D G F QVLR ++ +++++ TH HAD + G+D + R + Sbjct: 70 YIIIDVGKTFREQVLRWFVHHKIPWVNSIILTHEHADAVLGLDDVWMVQPKGCSNDFRRV 129 Query: 107 DVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ M + F Y K D+ + ++ +IE D+ S+G + Sbjct: 130 PIFLTQFTMDSVVARFPYLLKNKPEEGDEVSQVAQLDWRIIEG-DIDKPFVSSGLEFVPL 188 Query: 163 PILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNGLH 214 P++ G I LGF FG +AY +DV+ F E+ + LD LI++ N LH Sbjct: 189 PVMHGEGNI-CLGFLFGRKAKIAYLSDVSRFLPETEYAISKSGAGQLDLLILET--NTLH 245 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-------VVPAFDGMQF 266 +L ++ I+PK A+L M + ++ ++ V A DG++ Sbjct: 246 GK------TLDAVKRISPKRALLIGMRHEFEHYRENQNLAEWSSREGIPVQLAHDGLRV 298 >gi|284161362|ref|YP_003399985.1| beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011359|gb|ADB57312.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631] Length = 253 Score = 199 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 105/267 (39%), Gaps = 39/267 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G S G+P I C+ K R R S+ I +++DT PD Sbjct: 1 MRVTLLGTGDSTGIPIIGCHCKTCEDARKKGWERKRFSVMIQ-----NEGKILLIDTSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V +DAV++TH H DH G G F + + + VY P + + Sbjct: 56 MRRQLLDTNVDRVDAVIWTHCHFDHFGGF----GNFYRVQSDVKVYTTPKIHDDIGKFMS 111 Query: 124 YC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + +K ++ Y P + G I H + ++G + Sbjct: 112 FMEYKPIEVECYEP---------------FELIGLKITL--FEVNHPPVDAIGVKIEWNG 154 Query: 183 Y----CTDVN-AFPAESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLKKIELINPKNAI 236 Y D N P SLE+++ D I++AL G H + E+L + I + + Sbjct: 155 YKIVVSGDTNADIPKRSLEEMEEPDLFIVEALAPRGRFKKHMNAEEALSLAKKIRARKTV 214 Query: 237 LTHMHVDL-DYDMVLKSTPSRVVPAFD 262 LTH+ +D+ +K P +D Sbjct: 215 LTHVGHFFPPHDIAVKKYP----IGYD 237 >gi|307352743|ref|YP_003893794.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307155976|gb|ADN35356.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] Length = 239 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 64/250 (25%), Positives = 101/250 (40%), Gaps = 35/250 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G ++G PR+ D G C + R R R+S I +++DT PD Sbjct: 1 MKITILGTGDTVGTPRVGCDCGVCTLATEEGRSRLRTSFLIE-----NEGNNILIDTSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q++R I AVL+TH H DHI G + F + + Y M + F Sbjct: 56 LKEQLIRTGAPKIGAVLWTHAHYDHIAGFNE----FYRVQDFPPAYTPEKVMNDISGFFH 111 Query: 124 YC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG----FRF 178 + FK Y P++ +E + H I + G + Sbjct: 112 FLRFKKNIVEPYEPLI-----------------LFGMEITFVTVNHPPIDTYGIVIRYNG 154 Query: 179 GNVAYCTDVN-AFPAESLEKLQNLDFLIIDALK-NGLH-SSHFSLSESLKKIELINPKNA 235 + Y +D N P ++E+L N D L +DAL +H H +++E+ + ++PK Sbjct: 155 KKIGYTSDTNPNIPERTVEELMNCDLLFLDALMLPDVHIGKHMNIAEAEDLAQKLSPKEY 214 Query: 236 ILTHMHVDLD 245 HM + Sbjct: 215 YFVHMSHRIP 224 >gi|219667918|ref|YP_002458353.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219538178|gb|ACL19917.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 261 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 122/278 (43%), Gaps = 35/278 (12%) Query: 6 HFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FT++G A LGVP + AC +P RTRS + E +++D PD Sbjct: 4 KFTLMGTTAGLGVPAFHCNCIACREARADPFWARTRSGAVLETGKE-----NILIDASPD 58 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESF 122 Q+LRE++ S+D + TH H DH GI L Y L++KRP+ ++ P + ++ Sbjct: 59 LSKQLLRERIQSVDYLFVTHWHYDHFGGIGDLEYYVKLERKRPVALFLPPSAVDDFAKA- 117 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFGN 180 YP + VIE + G + +P + G I G + Sbjct: 118 -----------YPFLEEVFVIEPWEFGKSYAFEGIELTVLPARHSIETGGILLAGAK--R 164 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELINPKNAI 236 AY TD + PA + +LQ +D LI DA NG H SH + E++ E I ++ + Sbjct: 165 AAYFTDTSGLPAPTARQLQGVDTLICDATFNGANWFPH-SHMNWQEAIALGESIRAQHTV 223 Query: 237 LTH--MHVD--LDYDMVLKSTPSR--VVPAFDGMQFSS 268 LTH MH + + + V A+DGM + Sbjct: 224 LTHLAMHYSTPITAAQLQEKLKDYAQVSLAYDGMVLTI 261 >gi|71020439|ref|XP_760450.1| hypothetical protein UM04303.1 [Ustilago maydis 521] gi|46100119|gb|EAK85352.1| hypothetical protein UM04303.1 [Ustilago maydis 521] Length = 376 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 36/267 (13%) Query: 9 ILGCGASLGVPRITG-------DWGACDPT--NP--KNRRTRSSLKISRVSERGSNTTVI 57 LG G S VP I D AC NP KNRR R +E ++ ++ Sbjct: 25 FLGTGTSGQVPAIHCVTKPDFGDCAACRDATLNPTGKNRRG------CRDAEDKLDSAIL 78 Query: 58 VDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDVYAA 111 +D G FY + R + I AVL TH HAD I G+D LR + + +R + +Y Sbjct: 79 IDCGKTFYSNAIVHFPRNGIREIRAVLLTHAHADAILGLDDLRAWTMGGVIQRHVPIYLT 138 Query: 112 PDCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGG--VIEAIPILQQ 167 +CM + F Y P + +I N D P + ++ G ++ P+ Sbjct: 139 QECMAVVEGMFPYLVDRSKSTGGGDVPTLQWNII-NKDQPFIIPASHGRKEVKVQPLPVL 197 Query: 168 HG------RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 HG LGFR + +Y +D + PA +L+ ++ +++DALK H SHFS + Sbjct: 198 HGFLGRVSPFWCLGFRIDSFSYISDCHEIPAATLQLMRGSQAIVMDALKMDRHLSHFSFA 257 Query: 222 ESLKKIELINPKNA--ILTHMHVDLDY 246 ++L +P A +LT +++ Sbjct: 258 QALSFFASFSPPPALGLLTDFTHRIEH 284 >gi|331231748|ref|XP_003328537.1| hypothetical protein PGTG_10496 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307527|gb|EFP84118.1| hypothetical protein PGTG_10496 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 412 Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 105/290 (36%), Gaps = 51/290 (17%) Query: 4 YYHFTILGCGASLGVPRITG-------DWGACDPTNPKNRRTRSSLKISRVSERGSNT-- 54 +LG G S VP I C + K+ R +S + + Sbjct: 8 RIEVILLGTGTSGQVPSIACLTDPEDQGCRCCKSEDRKDLRRNTSALLRIHHPSNKTSPD 67 Query: 55 ------TVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--Q 102 +++D G F + + +DAVL THPHAD I+G+D LR + L Sbjct: 68 APSTPLHLLIDVGKSFCEAAREFFPKHNIRRLDAVLLTHPHADAINGLDDLRAWTLGGAI 127 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGGVIE 160 + I +Y + + Y + P +I + + +E Sbjct: 128 QDSIPIYCNEYTHTEISRMYPYLVNSHAKTGGGDVPQFTWNIIRDG-----ISFTLFGVE 182 Query: 161 AIPILQQHGR----------ISSLGFRFGN-VAYCTDVNAFPAESLEKL----------- 198 +P+ HG+ + + Y +DV+ P E++ K+ Sbjct: 183 ILPLPVHHGKFFESNSKDKPYICTSYMIAKTIYYVSDVSEIPEETMTKILESHSGRGDGG 242 Query: 199 -QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 L+ LIID L+ H+SHF +++++ + +NP L + +D Sbjct: 243 GGRLNVLIIDTLRLLPHASHFGIAQAIHAAQRLNPIRTYLVGFTHRVTHD 292 >gi|310640832|ref|YP_003945590.1| beta-lactamase domain-containing protein [Paenibacillus polymyxa SC2] gi|309245782|gb|ADO55349.1| Beta-lactamase domain-containing protein [Paenibacillus polymyxa SC2] Length = 256 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 97/273 (35%), Gaps = 34/273 (12%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G ++GVPR+ D C N R RSS+ I +E ++D GPD Sbjct: 3 RLIFLGTGDAMGVPRVYCDCLVCTEARTTGTNVRLRSSVLIKSETED-----FMIDCGPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + Q+ + I +L TH H DHI G+ +YA + + + F Sbjct: 58 WRRQLELRSLRFIPTILVTHAHFDHIGGLPEWADACRWTGNRGRLYAPQEVIDTILRQFS 117 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN-- 180 + P ++ I P+ G HG+ + +R Sbjct: 118 WL---------PGNLDLI-------PVDQGVQLGGWNIRGWRVNHGKNGYAYAYRLEKDG 161 Query: 181 --VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELINPK 233 AYC+D + L NL+ L++ S + + E+ + + + P Sbjct: 162 FSWAYCSDSIGLNEAEILPLHNLNLLVLGTSFYHEKAEYATRSVYDMLEAQELVGRLKPG 221 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + + THM D+D + A GM Sbjct: 222 STVFTHMSHDVDI-TYNYGLLEGISLAHTGMSL 253 >gi|167533790|ref|XP_001748574.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773093|gb|EDQ86738.1| predicted protein [Monosiga brevicollis MX1] Length = 1044 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 73/363 (20%), Positives = 116/363 (31%), Gaps = 116/363 (31%) Query: 4 YYHFTILGCGASLGVPRITG---------DWGACDPTN----PKNRRTRSSLKISR-VSE 49 +LG G S VP I C + +N+RT S+ + +E Sbjct: 693 RSRLVLLGTGPSTCVPNIGCLLGLRGERSPCAVCKEAHTNPISRNKRTNPSMLLQYKAAE 752 Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLK---- 101 T ++ D G F QV R +V +DA+L TH HAD + G+D LR Sbjct: 753 ADEYTNILFDCGKTFRSQVERFFPKFEVKGLDAILLTHDHADAVLGLDDLRDLQRYVVVK 812 Query: 102 ----------QKRPIDVYAAPDCMKHLFESFRYCFK------------------------ 127 + P+ V+ + L ++F Y Sbjct: 813 NEETQESTWQVEEPMQVFCSDQTFNRLGQAFPYLVTGESSPRITTGDKSNEDVEAAATAG 872 Query: 128 -----------------------------ALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + + + V+ + D + A Sbjct: 873 AASPSEVVDAPSQTGEASTQADPGPVKAGTKEPKRHISQLKWNVVADLDEESKTEDAAFN 932 Query: 159 IEAI---PILQQH-GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 + + P+ H G +LGF FG VAY +D N PA ++ K Sbjct: 933 VHGLEVKPLRLHHGGTYLALGFLFGAHGTRVAYLSDTNGLPARTMRK------------- 979 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 H++HFSL +SL+ I + PK L M + +Y V +DG Sbjct: 980 ---HTTHFSLPQSLELIRELRPKQTYLVGMSHEFNYHKHNAQLAKLAEAEGLNVAMGYDG 1036 Query: 264 MQF 266 + Sbjct: 1037 LHL 1039 >gi|11498089|ref|NP_069314.1| ATP-binding protein PhnP (phnP) [Archaeoglobus fulgidus DSM 4304] gi|2650153|gb|AAB90764.1| ATP-binding protein PhnP (phnP) [Archaeoglobus fulgidus DSM 4304] Length = 254 Score = 194 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 33/257 (12%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G S G P + C+ K R R S+ + + TV++DT PD Sbjct: 4 TLLGTGDSPGTPILNCHCRTCEDARRKGWERKRFSVMVQ-----NNGKTVLIDTSPDLRR 58 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q+L V +DAV++TH H DH G F + + + VY+ P + + ++ Sbjct: 59 QLLDCGVEKVDAVIWTHCHFDHFGGFGE----FYRVQNNVKVYSTPQIHEDIGHFMKFM- 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY--- 183 +Y P+ + AG +P+ H +S++G + Y Sbjct: 114 ------SYKPV-------EVEAFENFTIAGMDFTLLPV--NHPPVSAVGVKVEWKGYKVV 158 Query: 184 -CTDVN-AFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM 240 D N P +L ++QN D LI++AL G H + E+L+ + +N +LTH+ Sbjct: 159 VSGDTNVRIPEATLREMQNPDLLIVEALAPTGRFRKHMNAKEALELAKRLNAGKVVLTHL 218 Query: 241 HVDL-DYDMVLKSTPSR 256 + + +KS P Sbjct: 219 GHFFPPHHLAIKSYPVG 235 >gi|147919570|ref|YP_686690.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110622086|emb|CAJ37364.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 246 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 44/275 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G ++G P+I AC K+RR R + ++ V+++TGP Sbjct: 1 MRITLLGTGDAVGTPKIGCKCPACLDAKKGGKSRRYRPGILVT-----DGKLNVMIETGP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+L + IDAV+++H H DH G F + K + VY + ++ F Sbjct: 56 DLRSQLLDNDIERIDAVVWSHQHRDHTGGFGD----FWRVKSNMPVYGEKQVLDYVLGEF 111 Query: 123 RYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRF-- 178 + F D Y P + G +E H I + G R Sbjct: 112 HFMSFDRHDCELYRPFM-----------------IGELEFTLFEVTHPPIRMATGMRIRH 154 Query: 179 --GNVAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGLH---SSHFSLSESLKKIELINP 232 + Y D N P+ES+ + + D LI DA+ H H + ++++ Sbjct: 155 NGKTLVYTGDTNRQIPSESMAIMMDPDLLIADAIVP-PHINIDKHMNAADAMNLAMETRA 213 Query: 233 KNAILTHMHVDL-DYDMVLKSTPSRVVPAFDGMQF 266 K +LTH+ ++ ++ P +DGM Sbjct: 214 KTTLLTHIAHLFPPHEEAARTYP----LGYDGMII 244 >gi|116753510|ref|YP_842628.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116664961|gb|ABK13988.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 245 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 39/272 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG G ++G P+I C ++RR R S+ + V++DT P Sbjct: 1 MRVVMLGTGDAIGTPKIGCRCPTCVDALNGGRSRRLRFSILLE-----NDEGRVLIDTSP 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D Q+++ + +DAV++TH H DH G F + + + VYA + ++ Sbjct: 56 DLRWQLIKMGISKVDAVIWTHAHYDHYAGFGD----FHRVQNHVPVYATRSTLDYVI--- 108 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 +Y + P + + + AG H + ++G Sbjct: 109 ----------SYLYFLRPQRHDVEPLE-PFEIAGMEFTL--FEVNHPPVETMGVLVSAGG 155 Query: 179 GNVAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGLHS--SHFSLSESLKKIELINPKNA 235 V +D N ESL+ +++ D I DA+ + H + E++ +N + Sbjct: 156 KRVVITSDTNDALSEESLDIMRDADLFIADAIMPPGYKLNKHMNADEAISLAHRLNARQT 215 Query: 236 ILTHMHVD-LDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ +D +K P A D M Sbjct: 216 VLTHLSHLYPPHDEAVKRWP----LAHDMMSI 243 >gi|71737415|ref|YP_275109.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557968|gb|AAZ37179.1| phosphonate metabolism protein PhnP [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323605|gb|EFW79689.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328239|gb|EFW84243.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 253 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 104/275 (37%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTFGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGMQF 266 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|40804950|gb|AAR91743.1| PhnP [Pseudomonas stutzeri] Length = 249 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC +P RR S + +R + + D Sbjct: 1 MRLTLLGTGGAAQVPVYNCACPACRAAQLDPSRRRRACSALVDCGGQRWLLDSGLPDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S +L TH HADH G+ LR I V D + L + + Sbjct: 61 -------RFAPGSFSGILQTHYHADHAQGLLQLR---WGTGLHIPVLGPDD-AEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 ++ P I++ + + G + + H + + G+ Sbjct: 110 KH----------PGILDF----SEPFAAFEQRMLGTLRVTALPLVHSK-PTFGYLLEGHS 154 Query: 181 --VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P + E LQ+ LD L++D ++ +H L+ +L+ IE + P Sbjct: 155 RCIAYLTDTVGLPDSTRELLQDTALDVLVLDCSTPPRDTPPRNHNDLTRALQSIEELQPA 214 Query: 234 NAILTHMHVDLDYD--MVLKSTPSRVVPAFDGMQF 266 A+LTH+ +LD + P V A+DGM Sbjct: 215 QAVLTHIGHELDAWFMQASRELPDNVCLAYDGMTL 249 >gi|89896275|ref|YP_519762.1| hypothetical protein DSY3529 [Desulfitobacterium hafniense Y51] gi|89335723|dbj|BAE85318.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 261 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 35/278 (12%) Query: 6 HFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 FT++G A LGVP + AC +P RTRS + E +++D PD Sbjct: 4 KFTLMGTTAGLGVPAFHCNCIACREARADPFWARTRSGAVLETGKE-----NILIDASPD 58 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESF 122 Q+LRE++ S+D + TH H DH GI L Y L++K P+ ++ P + + Sbjct: 59 LSKQLLRERIQSVDYLFVTHWHYDHFGGIGDLEYYVKLERKWPVALFLPPSAVDDFAK-- 116 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFGN 180 YP + VIE + G + +P + G I G + Sbjct: 117 ----------VYPFLEEVFVIEPWEFGKSYAFEGIELTVLPARHSIETGGILLAGSK--R 164 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELINPKNAI 236 AY TD PA + +LQ +D LI DA NG H SH + E++ E I ++ + Sbjct: 165 AAYFTDTAGLPAPTARQLQGVDTLICDATFNGANWFPH-SHMNWQEAIALGESIRAQHTV 223 Query: 237 LTH--MHVD--LDYDMVLKSTPSR--VVPAFDGMQFSS 268 LTH MH + + + V A+DGM + Sbjct: 224 LTHLAMHYSTPITAAQLQEKLKDYAQVSLAYDGMVLTI 261 >gi|94985686|ref|YP_605050.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94555967|gb|ABF45881.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 267 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 77/276 (27%), Positives = 108/276 (39%), Gaps = 32/276 (11%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSER-GSNTTVIVDTGPD 63 T LG S GVPR D C NRRTRS+ + G T+++D GPD Sbjct: 5 LTFLGSADSKGVPRFWCDCPVCAEARTSGVNRRTRSAALVRGAEPSTGELQTLLLDCGPD 64 Query: 64 FYMQVLREQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + Q+ R + DAVL +H H DH+ G+ L Y + VYA + + + F Sbjct: 65 LHAQLARLPGPLVPDAVLISHAHNDHVLGLGDLLDYVGYAGERLHVYAPAAVIPDIQDRF 124 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN- 180 RY F++ V P+ E +V + HG S FR Sbjct: 125 RYAFRS------AAPVWPLPEEGLEVA--------GLRVRAFRVPHGANGHSHAFRLDRP 170 Query: 181 ---VAYCTDVNAFPAESL-EKLQNLDFLIIDAL----KNGLH--SSHFSLSESLKKIELI 230 AY TD PAE + L NLD LI+ H S + + E+L Sbjct: 171 GFAAAYVTDAIDIPAEVIGRWLTNLDLLILGTSFADESRVPHAGRSVYDVREALALPWAQ 230 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + LTH+ D+D + P A DG++ Sbjct: 231 AVRRVFLTHLSHDVDVRT--RPLPRNWSWAHDGLEL 264 >gi|330888448|gb|EGH21109.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. mori str. 301020] Length = 249 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + +LG+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTLGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 RRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGMQF 266 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|257486033|ref|ZP_05640074.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331010392|gb|EGH90448.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 249 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTFGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGMQF 266 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|28869758|ref|NP_792377.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato str. DC3000] gi|28853003|gb|AAO56072.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato str. DC3000] Length = 249 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 106/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC N RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACSAAQANQDLRRLPCSALIECAGQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G + + H R + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGELHVTALPLAHSR-PTFGYLLEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 VAY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRVAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLRPA 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMEPPQRLPGHVLIGRDGMTL 249 >gi|213971298|ref|ZP_03399414.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato T1] gi|301385067|ref|ZP_07233485.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato Max13] gi|302059146|ref|ZP_07250687.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato K40] gi|302131438|ref|ZP_07257428.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923943|gb|EEB57522.1| phosphonate metabolism protein, PhnP [Pseudomonas syringae pv. tomato T1] Length = 249 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 106/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC N RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACSAAQANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G + + H R + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGELHVTALPLAHSR-PTFGYLLEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 VAY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRVAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLRPA 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMEPPQRLPGNVLIGRDGMTL 249 >gi|270265083|ref|ZP_06193346.1| carbon-phosphorus lyase complex accessory protein [Serratia odorifera 4Rx13] gi|270041017|gb|EFA14118.1| carbon-phosphorus lyase complex accessory protein [Serratia odorifera 4Rx13] Length = 260 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 99/273 (36%), Gaps = 37/273 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G + +P D C P RR S + E T ++D G Sbjct: 1 MQLTFLGTGGAQQIPVFGCDCLVCQRARREPAFRRRPCSAMLKFQGE-----TTLLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + R I L TH H DH+ G+ LR I VY D + Sbjct: 56 PSLER--RFSAGEIQRFLLTHYHMDHVQGLFPLRWGC---GNFIPVYGPAD-----EQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 FK + P + P + G + P+ QH + +LG+ Sbjct: 106 DDLFKHPGILAFQPPLTPFE----------RVELGGLHITPLPLQHSK-PTLGYLVQAEG 154 Query: 181 --VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P ++ L+N LD L++D + +H L+ + + + + P Sbjct: 155 YALAYLTDTVGLPPDTEAFLRNITLDLLVLDCSLPPQPQAPRNHNDLTRAQETQQRLQPG 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ LD ++ P + AFD + Sbjct: 215 RTLLTHISHHLDLWLMDNELPPGMELAFDNLSV 247 >gi|330986082|gb|EGH84185.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 249 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECGDQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTFGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGMQF 266 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|298487394|ref|ZP_07005441.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158079|gb|EFH99152.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 249 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 104/273 (38%), Gaps = 39/273 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTFGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRFAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGM 264 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGM 247 >gi|22124633|ref|NP_668056.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis KIM 10] gi|45440471|ref|NP_992010.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis biovar Microtus str. 91001] gi|51594860|ref|YP_069051.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis IP 32953] gi|108808958|ref|YP_652874.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Antiqua] gi|108810787|ref|YP_646554.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Nepal516] gi|145600529|ref|YP_001164605.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Pestoides F] gi|153997495|ref|ZP_02022595.1| PhnP protein [Yersinia pestis CA88-4125] gi|162418243|ref|YP_001608316.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis Angola] gi|165925685|ref|ZP_02221517.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. F1991016] gi|165936631|ref|ZP_02225198.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. IP275] gi|166010196|ref|ZP_02231094.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. E1979001] gi|166214290|ref|ZP_02240325.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. B42003004] gi|167399439|ref|ZP_02304963.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420604|ref|ZP_02312357.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423640|ref|ZP_02315393.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467364|ref|ZP_02332068.1| phosphonate metabolism protein PhnP [Yersinia pestis FV-1] gi|186893869|ref|YP_001870981.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis PB1/+] gi|218930479|ref|YP_002348354.1| carbon-phosphorus lyase complex accessory protein [Yersinia pestis CO92] gi|229839114|ref|ZP_04459273.1| PhnP protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896602|ref|ZP_04511769.1| PhnP protein [Yersinia pestis Pestoides A] gi|229899678|ref|ZP_04514819.1| PhnP protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900987|ref|ZP_04516111.1| PhnP protein [Yersinia pestis Nepal516] gi|294505169|ref|YP_003569231.1| PhnP protein [Yersinia pestis Z176003] gi|21957440|gb|AAM84307.1|AE013674_3 phosphonate metabolism [Yersinia pestis KIM 10] gi|45435328|gb|AAS60887.1| PhnP protein [Yersinia pestis biovar Microtus str. 91001] gi|51588142|emb|CAH19748.1| PhnP protein [Yersinia pseudotuberculosis IP 32953] gi|108774435|gb|ABG16954.1| PhnP protein [Yersinia pestis Nepal516] gi|108780871|gb|ABG14929.1| PhnP protein [Yersinia pestis Antiqua] gi|115349090|emb|CAL22053.1| PhnP protein [Yersinia pestis CO92] gi|145212225|gb|ABP41632.1| PhnP protein [Yersinia pestis Pestoides F] gi|149289132|gb|EDM39212.1| PhnP protein [Yersinia pestis CA88-4125] gi|162351058|gb|ABX85006.1| phosphonate metabolism protein PhnP [Yersinia pestis Angola] gi|165915280|gb|EDR33890.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. IP275] gi|165922297|gb|EDR39474.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. F1991016] gi|165991103|gb|EDR43404.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. E1979001] gi|166204522|gb|EDR49002.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. B42003004] gi|166961410|gb|EDR57431.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051943|gb|EDR63351.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057810|gb|EDR67556.1| phosphonate metabolism protein PhnP [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186696895|gb|ACC87524.1| phosphonate metabolism protein PhnP [Yersinia pseudotuberculosis PB1/+] gi|229682326|gb|EEO78418.1| PhnP protein [Yersinia pestis Nepal516] gi|229687170|gb|EEO79245.1| PhnP protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695480|gb|EEO85527.1| PhnP protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700380|gb|EEO88412.1| PhnP protein [Yersinia pestis Pestoides A] gi|262363231|gb|ACY59952.1| PhnP protein [Yersinia pestis D106004] gi|262367162|gb|ACY63719.1| PhnP protein [Yersinia pestis D182038] gi|294355628|gb|ADE65969.1| PhnP protein [Yersinia pestis Z176003] gi|320016670|gb|ADW00242.1| PhnP protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 250 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 104/275 (37%), Gaps = 37/275 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D C +P RR S + E T ++D G Sbjct: 1 MQLTLLGTGCAQQVPVFGCDCVICTQASVDPARRRKPCSAMLYYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R I L TH H DH+ G+ LR I VY PD + Sbjct: 56 PTLDQQFRAG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNKIPVYGPPD-----LDGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 FK + P + G + P+ H +I + G+ + Sbjct: 106 DDLFKHPGILDFRP----------PLTAFQPLQFGELRVTPVPLVHSKI-TFGYLLQSPN 154 Query: 181 --VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD A+S L +++D L++D ++ +H ++ +L +L+ P+ Sbjct: 155 RAIAYLTDTVGLSADSALFLASKSIDLLVLDCSHAPQSPPPRNHNDVTMALAIRDLLMPE 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTH LD ++ S P+ V A+D + Sbjct: 215 ETLLTHASHQLDRWLLNNSLPTGVSVAYDNQTVTL 249 >gi|330971989|gb|EGH72055.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 250 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 107/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC + RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACAAARTNHDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFERRALGALQVTALPLTHSK-PTFGYLFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ LD L++D + +H L+ +L+ IE + P Sbjct: 155 QRFAYLTDTVGLPDHTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPG 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ K P VV DGM Sbjct: 215 RAVLTHVGHTLDAWLMRHSKQLPGNVVVGRDGMTV 249 >gi|116051390|ref|YP_789777.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa UCBPP-PA14] gi|296388115|ref|ZP_06877590.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PAb1] gi|115586611|gb|ABJ12626.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 256 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 44/280 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ IE Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIE 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 + P+ A+LTH+ LD ++ + P V A DGM Sbjct: 215 SLRPRRAVLTHVGHALDAWLLDHPAALPEGVELAHDGMCL 254 >gi|152985004|ref|YP_001347141.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PA7] gi|150960162|gb|ABR82187.1| phosphonate metabolism protein PhnP [Pseudomonas aeruginosa PA7] Length = 256 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 72/276 (26%), Positives = 106/276 (38%), Gaps = 36/276 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + + RR S + +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACGRARIDERLRRRPCSALLEHAGQRWLIDSGLADLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHL- 118 R S+D +L TH HADH G+ LR G + P D D KH Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPG 113 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVP-ICMKSAGGVIEAIPILQQHGRISSLGFR 177 F F A + R + P+ + + P G E P Sbjct: 114 ILDFSQPFSAFERRQWGPLAATALPLVHSKPTFGYLLEGASEEGAP-------------- 159 Query: 178 FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 +AY TD PA+S +L LD L++D + +H L+ +L+ IE + P Sbjct: 160 -RRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIESLRP 218 Query: 233 KNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 + A+LTH+ LD ++ + P V A DGM Sbjct: 219 RRAVLTHVGHALDAWLLEHPAALPEGVELARDGMCL 254 >gi|153950419|ref|YP_001402522.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis IP 31758] gi|152961914|gb|ABS49375.1| phosphonate metabolism protein PhnP [Yersinia pseudotuberculosis IP 31758] Length = 250 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 104/275 (37%), Gaps = 37/275 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D C +P RR S + E T ++D G Sbjct: 1 MQLTLLGTGCAQQVPVFGCDCVICTQASVDPARRRKPCSAMLYYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R I L TH H DH+ G+ LR I VY PD + Sbjct: 56 PTLDQQFRAG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNKIPVYGPPD-----LDGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 FK + P + G + P+ H +I + G+ + Sbjct: 106 DDLFKHPGILDFRP----------PLTAFQPLQFGELRVTPVPLVHSKI-TFGYLLQSPN 154 Query: 181 --VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD A+S L +++D L++D ++ +H ++ +L +L+ P+ Sbjct: 155 RAIAYLTDTVGLSADSALFLASKSIDLLVLDCSHAPQSPPPRNHNDVTMALAIRDLLMPE 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTH LD ++ + P+ V A+D + Sbjct: 215 ETLLTHASHQLDRWLLNNTLPTGVSVAYDNQTVTL 249 >gi|304398902|ref|ZP_07380772.1| phosphonate metabolism protein PhnP [Pantoea sp. aB] gi|304353606|gb|EFM17983.1| phosphonate metabolism protein PhnP [Pantoea sp. aB] Length = 256 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 36/272 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G P D AC N + R S I ER +++D G Sbjct: 1 MKLTFLGTGGVTAAPLPGCDCHACQRAQRNSTHARAPCSALIESGHER-----ILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH H DH+ G+ LR PI V+ PD Sbjct: 56 PLLAS--RFPPGSLTRILLTHYHMDHVQGLFALR---WGVGAPIPVWGPPD-----PRGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 +K + P + P V A G ++ P+ QH ++ + G+ F Sbjct: 106 DDLYKHPGLLDFRPALTPFVAH----------AFGELQVTPLPLQHSKL-THGYLFDWHD 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L+ LD L+ID +H L+++L E + P+ Sbjct: 155 TRLAWLCDTCGLPPDTADFLRGQPLDQLVIDCNDPPRAEPRNHNDLTQALAIAERLKPRQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTH+ ++D + P V+PA DG Sbjct: 215 TWLTHLSHEMDNWLAENPLPEGVLPARDGQTL 246 >gi|313108726|ref|ZP_07794720.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa 39016] gi|310881222|gb|EFQ39816.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa 39016] Length = 256 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 44/280 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADVGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ IE Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIE 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 + P+ A+LTH+ LD ++ + P V A DGM Sbjct: 215 SLRPRRAVLTHVGHALDAWLLDHPAALPEGVELAHDGMCL 254 >gi|15598568|ref|NP_252062.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa PAO1] gi|9949507|gb|AAG06760.1|AE004759_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 256 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 111/280 (39%), Gaps = 44/280 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ IE Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIE 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 + P+ A+LTH+ +D ++ + P V A DGM Sbjct: 215 SLRPRRAVLTHVGHAVDAWLLDHPAALPEGVELAHDGMCL 254 >gi|289625741|ref|ZP_06458695.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649974|ref|ZP_06481317.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868136|gb|EGH02845.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 249 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLTHSK-PTFGYMFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P + E LQ L+ LI+D + +H L+ +L+ I+ + P Sbjct: 155 RRFAYLTDTVGLPDATCEFLQRQPLEVLILDCSMPPQPQPPRNHNDLTLALQTIDQLRPG 214 Query: 234 NAILTHMHVDLDYDM--VLKSTPSRVVPAFDGMQF 266 A+LTH+ LD + + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMGLPPGLPGHVLIGRDGMAL 249 >gi|170025917|ref|YP_001722422.1| carbon-phosphorus lyase complex accessory protein [Yersinia pseudotuberculosis YPIII] gi|169752451|gb|ACA69969.1| phosphonate metabolism protein PhnP [Yersinia pseudotuberculosis YPIII] Length = 250 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 37/275 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D C P RR S + E T ++D G Sbjct: 1 MQLTLLGTGCAQQVPVFGCDCVICTQARVEPARRRKPCSAMLYYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R I L TH H DH+ G+ LR I VY PD + Sbjct: 56 PTLDQQFRAG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNKIPVYGPPD-----LDGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 FK + P + G + P+ H +I + G+ + Sbjct: 106 DDLFKHPGILDFRP----------PLTAFQPLQFGELWVTPVPLVHSKI-TFGYLLQSPN 154 Query: 181 --VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD A+S L +++D L++D ++ +H ++ +L +L+ P+ Sbjct: 155 RAIAYLTDTVGLSADSALFLASKSIDLLVLDCSHAPQSPPPRNHNDVTMALAIRDLLMPE 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTH LD ++ S P+ V A+D + Sbjct: 215 ETLLTHASHQLDRWLLNNSLPTGVSVAYDNQTVTL 249 >gi|330876308|gb|EGH10457.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 249 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC N RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCAACLAAQTNQDLRRLPCSALIECAGQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G + + H R + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGELHVTALPLAHSR-PTFGYLLEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRMAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLRPA 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMEPPQRLPGHVLIGRDGMTL 249 >gi|330966989|gb|EGH67249.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 249 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 106/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC N RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACLAAQANQDLRRLPCSALIECAGQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G + + H R + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGELHVTALPLTHSR-PTFGYLLEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRMAYLTDTVGLPDATCEFLQRQPLDVLILDCSMPPQPQPPRNHNDLTLALESIDQLRPA 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ + P V+ DGM Sbjct: 215 KAVLTHIGHTLDAWLMEPPQRLPGHVLIGRDGMTL 249 >gi|326429872|gb|EGD75442.1| hypothetical protein PTSG_06517 [Salpingoeca sp. ATCC 50818] Length = 374 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 132/350 (37%), Gaps = 81/350 (23%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACDPT--NP--KNRRTRSSLKISRV--- 47 K +LG GAS VP + + C NP +N R S+ I Sbjct: 25 KGPSRLVLLGTGASSSVPNLACLIRTEGPECTVCQEAARNPLSRNLRGNPSMLIQYQPSL 84 Query: 48 -----------SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGI 92 ++ ++ D G F V R V IDA++ +H HAD + GI Sbjct: 85 TSNLDLVRVGNADDDGVKNILFDAGKTFASAVARFFPKLGVTGIDALVISHDHADAVLGI 144 Query: 93 DGLRGYFL--------------KQKRPIDVYAAPDCMKHLFES-----------FRYCFK 127 D LR + +PI+ + + + + + S F Y Sbjct: 145 DDLRSVHYLTPYEDEKAGRTKYEVAKPIEAFCSDETFERMQGSVNVCLPSTSAVFPYLIP 204 Query: 128 AL--------DDRTYPPIVNPIVIEN---NDVPICMKSAGGVIEAIPILQQHG-RISSLG 175 + + + +N V+ N D+ + + +E P+ HG LG Sbjct: 205 KKQIEAINAGEPKRFVSRINWHVVANLSDRDIDVDPPFSVFGLELQPVRMMHGGSYICLG 264 Query: 176 FRFG----NVAYCTDVNAFPAESLEKL--QNLDFLIIDALK-NGLHSSHFSLSESLKKIE 228 F FG +AY +DV FP +++ L N+D +IID+L + H +H L+E ++ + Sbjct: 265 FLFGPKDARIAYLSDVKVFPKPTMDLLLEANIDLMIIDSLYISEEHDTHMCLTEVVQVVR 324 Query: 229 LINPKNAILTHMHVDLDYDMVLKST--------PSRVVPAFDGMQFSSPI 270 + PK +L M D DY+ ++ + +DG+ F + Sbjct: 325 RVKPKRTVLVGMTHDFDYNTFDQALCSVVDDGEDLNIHMGYDGISFDVEL 374 >gi|297813941|ref|XP_002874854.1| hypothetical protein ARALYDRAFT_911824 [Arabidopsis lyrata subsp. lyrata] gi|297320691|gb|EFH51113.1| hypothetical protein ARALYDRAFT_911824 [Arabidopsis lyrata subsp. lyrata] Length = 287 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 109/307 (35%), Gaps = 67/307 (21%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSE 49 D LG G S VP C P N R +SL I Sbjct: 9 DRTALIFLGTGCSGAVPDFRCLLQPSDPPCHVCSQSLSLLPHLNPNYRCNTSLLIDYCI- 67 Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----P 105 + S ++ TH HAD +HG+D +R + P Sbjct: 68 -----------------------LESKSFIILTHEHADAVHGLDDIRSLQPRGATMDTYP 104 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDD---RTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + V+ + M+ + F Y + R + I+ EN D P + Sbjct: 105 LPVFLSQFSMESIATRFPYLVEKKVKEVPRRVSLLDWTIIEENCDKPFTASG----LSFT 160 Query: 163 PILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQ-----NLDFLIIDA---LK 210 P+ HG +LGF FG VAY +DV+ P + + LD LI+D K Sbjct: 161 PLPVMHGEDYIALGFLFGGKSKVAYISDVSRIPPSTEYAISKAGAGQLDLLILDTNIPRK 220 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 GLH +H E+L+ I+ + PK A+LT M D D+ + V A DG Sbjct: 221 RGLHPTHICFPEALEIIKRLCPKRALLTGMTHDFDHHEYNEILVEWSLREGIHVQLAHDG 280 Query: 264 MQFSSPI 270 ++ + Sbjct: 281 LRLPIDL 287 >gi|330958728|gb|EGH58988.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 249 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 106/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACLAARADQALRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + A G ++ + H R+ + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFETRALGALQVTALPLMHSRL-TFGYLLEGEG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P + E LQ LD LI+D + +H L+ +L+ I+ + P Sbjct: 155 QRIAYLTDTVGLPDATREFLQRQPLDLLILDCSMPPQPQPPRNHNDLTLALETIDQLRPA 214 Query: 234 NAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 A+LTH+ LD ++ + P+ VV D M Sbjct: 215 KAVLTHIGHTLDAWLMERPQRLPNHVVVGRDAMVM 249 >gi|124485836|ref|YP_001030452.1| hypothetical protein Mlab_1016 [Methanocorpusculum labreanum Z] gi|124363377|gb|ABN07185.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 239 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 33/255 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G +G P+I + C + R R+SL + +++DTGPD Sbjct: 1 MKVTALGTGDVVGTPKIGCECPICREAKEMGKQRLRTSLLVEHKG-----RHLLIDTGPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L IDAV++TH H DH G ++ Q+ PI VY AP+ + + F Sbjct: 56 MRAQLLAADSPRIDAVIWTHGHYDHFMGFGD---FYRVQREPISVYGAPEVLAYCGGIF- 111 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 CF ++ + P + G + P++ + G R Sbjct: 112 -CFIRHEEHSVKPF------------EPIDICGMEVTLFPVVHD---TPTYGVRITADGK 155 Query: 180 NVAYCTDVN-AFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAI 236 Y D SLE+++ D L++D + S H ++ ++ + E + PK Sbjct: 156 TFVYSCDTRAELSEASLEQMKGADLLLLDGIFPPGVNISKHMNIEDAERLAENLAPKEFW 215 Query: 237 LTHMHVDLDYDMVLK 251 HM + +D Sbjct: 216 CVHMSHKIPWDYEHA 230 >gi|254236333|ref|ZP_04929656.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126168264|gb|EAZ53775.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 256 Score = 188 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 110/277 (39%), Gaps = 44/277 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ IE Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIE 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDG 263 + P+ A+LTH+ LD ++ + P V A DG Sbjct: 215 SLRPRRAVLTHVGHTLDAWLLDHPAALPEGVELARDG 251 >gi|218890428|ref|YP_002439292.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas aeruginosa LESB58] gi|218770651|emb|CAW26416.1| putative phosphonate metabolism protein [Pseudomonas aeruginosa LESB58] Length = 256 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 110/277 (39%), Gaps = 44/277 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGSFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ IE Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECIE 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDG 263 + P+ A+LTH+ LD ++ + P V A DG Sbjct: 215 SLRPRRAVLTHVGHTLDAWLLDHPAALPEGVELARDG 251 >gi|149926105|ref|ZP_01914368.1| carbon-phosphorus lyase complex accessory protein [Limnobacter sp. MED105] gi|149825393|gb|EDM84604.1| carbon-phosphorus lyase complex accessory protein [Limnobacter sp. MED105] Length = 255 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 73/282 (25%), Positives = 107/282 (37%), Gaps = 46/282 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 T LG GA+ GVPR + AC+ NR R S I +T V++D G Sbjct: 1 MRITYLGTGAAGGVPRYGCNCAACERAQN-NRVFVRRPCSALIE-----DEDTRVVLDAG 54 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R + S A++ TH H DH+ G+ LR + VY PD + + Sbjct: 55 LMNLHD--RFPLGSYSAIVLTHFHPDHVQGLFHLR---WGVSGQVPVYCPPD-SEGCADL 108 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 F++ P ++E G + P+ H ++ + G+ N Sbjct: 109 FKH---------------PGILEFKPQTKFEPFQIGSLTFTPLPLIHSKV-TFGYLIENR 152 Query: 181 ----VAYCTDVNAFPAESLEKLQ--NLDFLIIDALKNG------LHSSHFSLSESLKKIE 228 AY TD P ++LE LQ N L IDA +H +++L IE Sbjct: 153 QGVRFAYLTDTVGLPPKTLELLQQSNPQGLAIDATDPPSNNVGAPGGNHNDWNQALALIE 212 Query: 229 LINPKNAILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSS 268 I P A LTH++ D +L + P V A D Sbjct: 213 QIKPVRAWLTHLNHRSDTWQMLNNPVLPQGVQVACDNAIIEL 254 >gi|320334350|ref|YP_004171061.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319755639|gb|ADV67396.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 259 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 114/282 (40%), Gaps = 42/282 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTG 61 T LG S GVPR + C NRRTRSS + RG+ +V++D G Sbjct: 2 TLTLTFLGTSDSQGVPRWSCTCAVCADARAGGANRRTRSSALL-----RGAGESVLLDCG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD + Q+ RE V +D + +H H DH+ G+ L RP+ ++A D + + Sbjct: 57 PDLHAQLTREGVTHLDHAVISHAHNDHLMGLGDLLD-VRAAPRPV-IHAPADVIPEVAAR 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFG- 179 F Y F+ P + +++AG + A HG S FR Sbjct: 115 FAYAFRNASPVRALP------------EVGLQAAGLTLRA--FRVPHGDNGDSHAFRLDG 160 Query: 180 ---NVAYCTDVNAFPAE-SLEKLQNLDFLI---------IDALKNGLHSSHFSLSESLKK 226 AY TD P + + L+NLD LI +DA + H S + + E+ Sbjct: 161 PSVRAAYVTDALRIPDALAAQWLKNLDLLILGTSFRAESLDATRT--HRSVYDVHEARAL 218 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + +LTH+ D+D+ P A DG+ + Sbjct: 219 SWAVRTPRVLLTHLSH--DHDVRAPDLPHGWAYAHDGLTITL 258 >gi|107102904|ref|ZP_01366822.1| hypothetical protein PaerPA_01003973 [Pseudomonas aeruginosa PACS2] Length = 256 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 44/277 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ I+ Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECID 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDG 263 + P+ A+LTH+ LD ++ + P V A DG Sbjct: 215 SLRPRRAVLTHVGHTLDAWLLDHPAALPEGVELARDG 251 >gi|146307900|ref|YP_001188365.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas mendocina ymp] gi|145576101|gb|ABP85633.1| beta-lactamase domain protein [Pseudomonas mendocina ymp] Length = 254 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 105/280 (37%), Gaps = 44/280 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP ACD P RR I ++R + + D Sbjct: 1 MRLTLLGTGDARQVPVYNCSCPACDAARVYPARRRGPCCALIECGAQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 F S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 RFAPH-------SLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPDD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + G + + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFERRQLGELNVTALPLTHSK-PTFGYLFEGLG 154 Query: 180 ------NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD P S +LQ LD L++D + +H L+ +L+ + Sbjct: 155 FEGQGRRIAYLTDTVGVPEASCAELQRAPLDLLVLDCSTAPQPVAPRNHNDLTRALEVVA 214 Query: 229 LINPKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 + P A+LTH+ D ++ + P V A DG+ Sbjct: 215 RLQPTQAVLTHIGHAFDAWLLEHPDALPPGVQLASDGLVL 254 >gi|254242059|ref|ZP_04935381.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126195437|gb|EAZ59500.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 256 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 44/277 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D AC + RR S + +R + +VD Sbjct: 1 MRLTLLGTGDARQVPVYGCDCPACRNARADAGLRRRPCSALLECAGQRWLIDSGLVDLCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+D +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPHSLDGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 ++ P I++ + + G + A + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFGAFERRQWGALAATALPLVHSK-PTFGYLLEGAS 154 Query: 178 ----FGNVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +AY TD PA+S +L LD L++D + +H L+ +L+ I+ Sbjct: 155 EEGTIRRLAYLTDTVGLPADSASRLLAAPLDLLVLDCSMPPQERPPRNHNDLTRALECID 214 Query: 229 LINPKNAILTHMHVDLDYDMVL--KSTPSRVVPAFDG 263 + P+ A+LTH+ LD ++ + P V A DG Sbjct: 215 SLRPRRAVLTHVGHTLDAWLLDHHAALPEGVELARDG 251 >gi|237800944|ref|ZP_04589405.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023800|gb|EGI03857.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 250 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 39/273 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP + AC RR S I +R ++D+G Sbjct: 1 MRLTLLGTGDARQVPVYGCNCMACSAARDDQDLRRLPCSALIECADQRW-----LIDSGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + + R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 56 NDLTE--RFPPHSLSGILQTHYHADHAQGLLHLR---WGQGLIIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + G ++ + H R + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFETRSLGAMQVTALPLTHSR-PTFGYLFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P + E LQ LD L++D + +H L+ +L+ I+ + P Sbjct: 155 QRIAYLTDTVGLPDVTREFLQRQPLDVLVLDCSMPPQPQPPRNHNDLTLALESIDQLRPG 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGM 264 A+LTH+ LD ++ + P VV D M Sbjct: 215 KAVLTHIGHTLDAWLMTQPRELPGNVVVGRDAM 247 >gi|189423987|ref|YP_001951164.1| beta-lactamase [Geobacter lovleyi SZ] gi|189420246|gb|ACD94644.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 270 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 114/276 (41%), Gaps = 36/276 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F +LG GA G P D C P RTRS ++ ++ V++DT PD Sbjct: 6 FILLGSGAGPGAPSFFCDCVGCREAREHPAAIRTRSGALLTTAGQQ-----VLIDTPPDL 60 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 Q+LRE+V +D + TH H DH GI L Y LK+ +PI +Y P E F Sbjct: 61 RQQLLRERVSDVDTLFITHWHYDHFGGIGELEYYVKLKRMQPITLYLPPSA----RELFH 116 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 F AL++ + G + P+ +H I + GF Sbjct: 117 NAFPALEE----------IFTVQTWEFFRSYPLGELLITPLPARHS-IETAGFMVSSPTV 165 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAI 236 +AY D P E+L +Q D+LI DA +N +SH S++E+++ + K I Sbjct: 166 RLAYFPDTAGLPPETLPLVQGSDYLICDATFSGENWFPNSHMSIAEAIELGQQAEAKTVI 225 Query: 237 LTHMHVDLDYDMVLKST------PSRVVPAFDGMQF 266 LTH+ V + V A DGM Sbjct: 226 LTHISVHYSRPLTSVELQQQLAAHPHVRAAHDGMVI 261 >gi|71663821|ref|XP_818898.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884175|gb|EAN97047.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 374 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 80/368 (21%), Positives = 128/368 (34%), Gaps = 100/368 (27%) Query: 3 DYYHFTILGCGASLGVPRITGDWGAC------DPTNPKNRRTRSSLKISRVSERGSN--- 53 + TI+G G S GVP I G C NRR SL I+ S G + Sbjct: 7 STFSLTIVGSGCSTGVPVIGHLSGNCACAVAMRDAEGPNRRNNVSLLITVPSPHGGSSGD 66 Query: 54 ----TTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY------- 98 V++D G F R QV ++DA+L TH H D + G+D +R Sbjct: 67 GRGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDG 126 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP-------------------- 136 K+ I YA+ M L F Y + + P Sbjct: 127 HDNWFVKQYIPTYASAKTMNALRCQFGYIHRNSRVMGFAPRTAEEHESIMQRVAEERERA 186 Query: 137 -------------IVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN-- 180 + + ++ P C+ + G + + +HG +LGF FG Sbjct: 187 GLTNNIGTRRSTALELFTLPDDTPTPFCIPALGADFKFHAVPVEHGAGYVALGFVFGRGV 246 Query: 181 -----------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHF 218 V Y +DV+ PA ++ LQ+L D LI+D L + +H+ Sbjct: 247 AFRSAGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYETHY 306 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFD 262 + + +K + + P M+ D++++ + R V FD Sbjct: 307 CMDDVIKLVASLQPTCTYTIGMYCDVEHERGNQQLRERLEELRCSGKCGSNVLSVELGFD 366 Query: 263 GMQFSSPI 270 G+ P+ Sbjct: 367 GLHILLPL 374 >gi|327394349|dbj|BAK11771.1| protein PhnP [Pantoea ananatis AJ13355] Length = 256 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 36/274 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G G P D AC + RR +S I ER +++D G Sbjct: 1 MKLTLLGTGGVTGAPVFGCDCHACLRARDASRYRRAPTSALIEAGRER-----ILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R Q I+ +L TH H DH+ G+ LR + I V+ PD + Sbjct: 56 PLL--AERFQPGEINRILLTHYHMDHVQGLFTLR---WGEGESIPVWGPPD-----DKGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 FK + P + P V G ++ P+ QH R+ + G+ F Sbjct: 106 DDLFKHPGLLDFRPALTPYVAH----------QFGELQVTPLPLQHSRL-THGYLFDWHG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L+ LD L++D +H L+ +L I+ + P Sbjct: 155 SRLAWLCDTCGLPPDTADFLRGQRLDHLLVDCNDPPGQGGRNHNDLTAALNIIDELKPHQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 A L H+ +D + + P V A DG+ S Sbjct: 215 AWLIHLSHHMDNWLAEHALPDGVRAACDGLSLSL 248 >gi|330502693|ref|YP_004379562.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas mendocina NK-01] gi|328916979|gb|AEB57810.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas mendocina NK-01] Length = 249 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP ACD + P RR I ++R + + D Sbjct: 1 MRLTLLGTGDARQVPVYNCSCPACDASRVYPARRRGPCCALIECGAQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 F S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 RFAPH-------SLSGILQTHYHADHAQGLLHLR---WGQGLIIPVHGPDD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + G + + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFERRQLGELSVTALPLTHSK-PTFGYLLKGQD 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P S +LQ LD L++D + +H L+ +L+ +E + P Sbjct: 155 RRIAYLTDTVGVPEASCAELQRAPLDLLVLDCSTAPQPVAPRNHNDLTRALEVVERLQPT 214 Query: 234 NAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 +LTH+ D ++ + P V A DG+ Sbjct: 215 QTVLTHIGHSFDAWLLEHADALPPGVTLASDGLML 249 >gi|157368759|ref|YP_001476748.1| carbon-phosphorus lyase complex accessory protein [Serratia proteamaculans 568] gi|157320523|gb|ABV39620.1| beta-lactamase domain protein [Serratia proteamaculans 568] Length = 260 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 98/273 (35%), Gaps = 37/273 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G + +P D C P RR S + E T ++D G Sbjct: 1 MQLTFLGTGGAQQIPVFGCDCLVCHRARREPAFRRRACSAMLKFQGE-----TTLLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + R I L TH H DH+ G+ LR I VY D + Sbjct: 56 PSLER--RFSAGEIQRFLLTHYHMDHVQGLFPLRWGC---GNFIPVYGPAD-----EQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 FK + P P G + P+ QH ++ +LG+ Sbjct: 106 DDLFKHPGILAFQPPFTPFE----------TVELGGLHITPLPLQHSKL-TLGYLIQAAG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 ++AY TD P ++ L+ LD +++D + +H L+ + + + + P Sbjct: 155 KSLAYLTDTVGLPPDTEAFLRAVTLDLMVLDCSLPPQPQAPRNHNDLTRARETQQRLQPG 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ LD ++ P + AFD + Sbjct: 215 RTLLTHISHHLDLWLMDNELPPGLELAFDNLSV 247 >gi|299755985|ref|XP_002912154.1| hypothetical protein CC1G_13686 [Coprinopsis cinerea okayama7#130] gi|298411471|gb|EFI28660.1| hypothetical protein CC1G_13686 [Coprinopsis cinerea okayama7#130] Length = 400 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 110/334 (32%), Gaps = 84/334 (25%) Query: 2 KDYYHFTILGCGASLGVPRITG----------DWGAC----DPTNPKNRRTRSSLKISRV 47 LG G S +P+I C P +N R +S + Sbjct: 11 SANIELIFLGTGTSSSLPQIACITRPPDDPKPPCRTCLSTLTPAGRRNIRRNTSAALRVK 70 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-- 101 G T+++D G +F L + IDA+L TH HAD ++G+D LR + L+ Sbjct: 71 GRDGQPVTIVIDVGKNFQAAALEWFPKYGLRKIDALLITHAHADAMNGLDDLRAWTLRGA 130 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENND-----------V 148 + IDVY + D + SF Y P +I++ V Sbjct: 131 IQSHIDVYVSADTFSEVKRSFPYLVSKEFASGGGDVPEFQWHIIQDQVPFEIGDTGIRVV 190 Query: 149 PICMKSAGGVIEAIPILQQHG--------------------------------------- 169 P + + + +H Sbjct: 191 PFAVHHGRLFTTSTSNVCEHPTPPAAKPVPLADSPPLRVASLSRPDKEVIENNRAGSEVT 250 Query: 170 -----RISSLGFRF-GNVAYCTDVNAFPAESLEKL------QNLDFLIIDALKNGLHSSH 217 S G++ + Y +DV+ P L Q L ++D L+ G H+SH Sbjct: 251 RETVYPYLSFGYKIQERLVYISDVSHIPEHVWPLLEPKADGQRLAVTVLDCLRLGPHTSH 310 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 F L +SLK IN LT ++ +D ++ Sbjct: 311 FGLEDSLKMARRINATRTYLTGFGHEVSHDEYVR 344 >gi|330428529|gb|AEC19863.1| carbon-phosphorus lyase complex accessory protein [Pusillimonas sp. T7-7] Length = 260 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 39/280 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC ++RR S + S+R + D Sbjct: 1 MRLTLLGTGNAGQVPVYNCFCAACARARTQSQHRRGPCSALLEFGSQRWLVDAGLTDL-- 58 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S++ V+ TH HADH G+ LR Q + V PD + L + + Sbjct: 59 -----AERFPPGSLNGVIQTHYHADHAQGLLHLR---WGQNMRLPVLGPPD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + + + G P+ H ++ + G+ F Sbjct: 110 KH----------PGILDF----SRTLEAFVTTELGECAITPVPLVHSKM-TYGYVFEAEG 154 Query: 180 -NVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P ++ L Q LD L++D +H L+ +L+ I +N K Sbjct: 155 QRFAYLTDTVGLPPDTQAYLARQPLDMLVLDCSFAPAATAPRNHNDLNRALETIASLNVK 214 Query: 234 NAILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSSPIP 271 A+LTH+ LD ++ ++ P VV DG F + P Sbjct: 215 QAVLTHISHALDVWLMDEAHVLPEGVVVGHDGAVFGNTAP 254 >gi|308187346|ref|YP_003931477.1| Protein phnP [Pantoea vagans C9-1] gi|308057856|gb|ADO10028.1| Protein phnP [Pantoea vagans C9-1] Length = 256 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 103/272 (37%), Gaps = 36/272 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G P D AC N + R I+ ER +++D G Sbjct: 1 MKLTFLGTGGVTAAPLPGCDCPACQRAQRNSAHARAPCCALIAFGHER-----ILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R ++ +L TH H DH+ G+ LR + PI V+ PD Sbjct: 56 PLLAS--RFPPGTLTRILLTHYHMDHVQGLFALR---WGKGGPIPVWGPPD-----PRGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 +K + P + P V A G ++ P+ QH ++ + G+ F Sbjct: 106 DDLYKHPGLLDFRPALTPFVAH----------AFGELQVTPLPLQHSKL-THGYLFDWHD 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L+ LD L+ID +H ++ +L L+ P+ Sbjct: 155 TRLAWLCDTCGLPPDTADFLRGQPLDQLVIDCNDPPRAEAGNHNDVTRALAIAALLQPRQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 LTH+ ++D + P V PA DG Sbjct: 215 TWLTHLSHEMDNWLAENPLPEGVQPARDGQTL 246 >gi|302188137|ref|ZP_07264810.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. syringae 642] Length = 250 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 105/275 (38%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC + RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACTAALADHDLRRLPCSALIECADQRWLIDSGLSDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHGQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + A G ++ + H + + G+ Sbjct: 110 KH----------PGILDF----SQPFAAFERRALGALQVTALPLAHSK-PTFGYLLEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P ++ E LQ LD L++D + +H L+ +L+ ++ + P Sbjct: 155 QRFAYLTDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALETVDWLRPG 214 Query: 234 NAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 A+LTH+ LD + P VV D M+ Sbjct: 215 RAVLTHVGHTLDAWFMEHSGQLPGNVVVGRDAMRV 249 >gi|164658606|ref|XP_001730428.1| hypothetical protein MGL_2224 [Malassezia globosa CBS 7966] gi|159104324|gb|EDP43214.1| hypothetical protein MGL_2224 [Malassezia globosa CBS 7966] Length = 388 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 127/312 (40%), Gaps = 60/312 (19%) Query: 6 HFTILGCGASLGVPRITG------DWGACDPT---NPKNRRTRSSLKI--SRVSERGSNT 54 LG G S VP I D C KNRR +S + S+ G+++ Sbjct: 14 EVIFLGTGTSSQVPAIHCITDKNSDCVTCTDAMKPGSKNRRFCTSAIVRGSKQGCPGTSS 73 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDV 108 T+++D G FY LR + +IDA+L TH HAD + G+D LR + + + +DV Sbjct: 74 TILIDCGKSFYESALRYFPVYGLRNIDALLLTHAHADAMLGLDDLRSWTMNACIQTHVDV 133 Query: 109 YAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y +CM + ++F Y + +I+ + + + P+ Sbjct: 134 YLTRECMDTVQQTFPYLVDTSRATGGGDVGALRWHIIDPH---TPFLAGPQQVPVQPLYV 190 Query: 167 QHG-------RISSLGFRFGNVAYCTDV-----------------NAFPAESLEKLQNLD 202 +HG + LGFR +++Y +D + P ++EK+ D Sbjct: 191 EHGYTHGGRVPFACLGFRIDSMSYISDCVRTSGCTHLCRRRSNSQHHIPETTMEKVVGSD 250 Query: 203 FLIIDALKNGLHSSHFSLSESL---------KKIELINPKN-AILTHMHVDLDYDMVLKS 252 I+D LK H+SHFS+ +++ ++P + +LT + L++ Sbjct: 251 LFILDGLKMNRHTSHFSIPQAITCTLDLCMRHAHRQLSPPSLTVLTDITHRLEHHSTESQ 310 Query: 253 TPSRVVPAFDGM 264 +V DG+ Sbjct: 311 ----IVTLLDGL 318 >gi|322829725|gb|EFZ33019.1| hypothetical protein TCSYLVIO_619 [Trypanosoma cruzi] Length = 371 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 79/368 (21%), Positives = 129/368 (35%), Gaps = 100/368 (27%) Query: 3 DYYHFTILGCGASLGVPRITGDWGAC------DPTNPKNRRTRSSLKISRVSERGSN--- 53 + TI+G G S GVP I G C NRR SL I+ S G + Sbjct: 4 STFSLTIVGSGCSTGVPVIGHLSGNCACAEAMRDAEGPNRRNNVSLLITVPSPHGGSNGD 63 Query: 54 ----TTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY------- 98 V++D G F R QV ++DA+L TH H D + G+D +R Sbjct: 64 GRGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDG 123 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFK----------------------------- 127 ++ I YA+ M L F Y + Sbjct: 124 HDNWFVEQYIPTYASAKTMNALRCQFGYIHRNSRVMGPAPRTAEEHESIMQHFAEERERA 183 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN-- 180 + R + + ++ P C+ + G + + +HG ++LGF FG Sbjct: 184 GLTNKIGTRRSTALELFTLPDDTPTPFCIPALGADFKFYAVPVEHGAGYTALGFVFGRGV 243 Query: 181 -----------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHF 218 V Y +DV+ PA ++ LQ+L D LI+D L + +H+ Sbjct: 244 AFRSVGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYETHY 303 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFD 262 + + +K + + P M+ D++++ + R V FD Sbjct: 304 CMDDVIKLVASLQPNCTYTIGMYCDVEHERGNQQLQERLEELRCSGKCGSNVLSVELGFD 363 Query: 263 GMQFSSPI 270 G+ P+ Sbjct: 364 GLHILLPL 371 >gi|71656370|ref|XP_816733.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70881881|gb|EAN94882.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 374 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 79/368 (21%), Positives = 127/368 (34%), Gaps = 100/368 (27%) Query: 3 DYYHFTILGCGASLGVPRITGDWGAC------DPTNPKNRRTRSSLKISRVSERG----- 51 + TI+G G S GVP I G C NRR SL I+ S G Sbjct: 7 STFSLTIVGSGCSTGVPVIGHLSGNCACAVAMRDAEGPNRRNNVSLLITVPSPHGSSNGD 66 Query: 52 --SNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY------- 98 V++D G F R QV ++DA+L TH H D + G+D +R Sbjct: 67 DRGVRRVLIDCGKTFRDAYFRVLAKHQVQTVDALLLTHDHVDAVGGLDDMRDLQRMSLDG 126 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFK----------------------------- 127 ++ I YA+ M L F Y + Sbjct: 127 HNNWFVEQYIPTYASAKTMNALRCQFGYIHRNSRVMGPAPRTAEEHESIMQHFAEERERA 186 Query: 128 ----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN-- 180 + R + + ++ P C+ + G + + +HG +LGF FG Sbjct: 187 GLTNKIGTRRSTALELFTLPDDTPTPFCIPALGADFKFHAVPVEHGAGYVALGFVFGRGV 246 Query: 181 -----------------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHF 218 V Y +DV+ PA ++ LQ+L D LI+D L + +H+ Sbjct: 247 AFRSAGATGAIVANHSCVVYLSDVSTVPAAAMMFLQDLVKIDVLIVDLLHGPGYRYETHY 306 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFD 262 + + +K + + P M+ D++++ + R V FD Sbjct: 307 CMDDVIKLVASLQPTCTYTIGMYCDVEHERGNQQLRERLEELRCSGKCGSNVLSVELGFD 366 Query: 263 GMQFSSPI 270 G+ P+ Sbjct: 367 GLHILLPL 374 >gi|295704500|ref|YP_003597575.1| hypothetical protein BMD_2377 [Bacillus megaterium DSM 319] gi|294802159|gb|ADF39225.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 259 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 93/277 (33%), Gaps = 33/277 (11%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 G + GVPR+ D C + N+RTR S + + ++D PDF Sbjct: 3 KLLFYGTSDAQGVPRLLCDCKVCTQKDQLNQRTRPSAQFTM-----DGNVFLIDVSPDFK 57 Query: 66 MQVLREQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q I V THPH DH+ G+ L +V AP+ + L E F Y Sbjct: 58 HQFHLYNNKKIPSTVFITHPHNDHVAGLGDLADLCYWNNVNTEVVGAPEVISELTERFPY 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF----- 178 T+ + G HG S G Sbjct: 118 L-AKRKGLTFKGTLKW--------------DSGETTITFHKVNHGFNGHSYGIVVHQKQG 162 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SSHFSLSESLKKIELINPK 233 AY +D E + +LD LI + S + ++E+++ + K Sbjct: 163 ERWAYVSDSFNVTKEQWQPFYHLDLLIFGTSFWKEYLQKEKRSVYDVTEAMEIKAKLQAK 222 Query: 234 NAILTHMHVDLDYDMVLKST-PSRVVPAFDGMQFSSP 269 N + TH+ D+D + V A+DG + P Sbjct: 223 NMVFTHLSHDIDIQKHAEMLSDENVSFAYDGREILLP 259 >gi|291617943|ref|YP_003520685.1| PhnP [Pantoea ananatis LMG 20103] gi|291152973|gb|ADD77557.1| PhnP [Pantoea ananatis LMG 20103] Length = 256 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 106/274 (38%), Gaps = 36/274 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G G P D AC + RR +S I ER +++D G Sbjct: 1 MKLTLLGTGGVTGAPVFGCDCHACLRARDASRYRRAPTSALIEAGRER-----ILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R Q I+ +L TH H DH+ G+ LR + I V+ PD + Sbjct: 56 PLL--AERFQPGEINRILLTHYHMDHVQGLFTLR---WGEGESIPVWGPPD-----DKGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 FK + P + P V G ++ P+ QH R+ + G+ F Sbjct: 106 DDLFKHPGLLDFRPALTPYVAH----------QFGELQVTPLPLQHSRL-THGYLFDWHG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKN 234 +A+ D P ++ + L+ LD L++D +H L+ +L I+ + P Sbjct: 155 SRLAWLCDTCGLPPDTADFLRGQRLDHLLVDCNDPPGQGGRNHNDLTAALNIIDELKPHQ 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 A L H+ +D + + V A DG+ S Sbjct: 215 AWLIHLSHHMDNWLAEHALSDGVRAACDGLSLSL 248 >gi|294499169|ref|YP_003562869.1| hypothetical protein BMQ_2412 [Bacillus megaterium QM B1551] gi|294349106|gb|ADE69435.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 259 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 96/272 (35%), Gaps = 23/272 (8%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 G + GVPR+ D C + N+RTR S + + ++D PDF Sbjct: 3 KLLFYGTSDAQGVPRLLCDCKVCTQKDQLNQRTRPSAQFTM-----DGNVFLIDVSPDFK 57 Query: 66 MQVLREQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q I V THPH DH+ G+ L +V AP+ + L E F Y Sbjct: 58 HQFHLYNNKKIPSTVFITHPHNDHVAGLGDLADLCYWNNVNTEVVGAPEVISELTERFPY 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 T+ + E + G I + Q+ G AY Sbjct: 118 L-AKRKGLTFKGTLKWDSRETTITFHKVNHGFNGHSYGIVVHQKQG---------ERWAY 167 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SSHFSLSESLKKIELINPKNAILT 238 +D E + +LD LI + S + ++E+++ + KN + T Sbjct: 168 VSDSFNVTKEQWQPFYHLDLLIFGTSFWKEYLQKEKRSVYDVTEAMEIKAKLQAKNMVFT 227 Query: 239 HMHVDLDYDMVLKST-PSRVVPAFDGMQFSSP 269 H+ D+D + V A+DG + P Sbjct: 228 HLSHDIDIRKHAEMLSDENVSFAYDGREILLP 259 >gi|124262972|ref|YP_001023442.1| carbon-phosphorus lyase complex accessory protein [Methylibium petroleiphilum PM1] gi|124263006|ref|YP_001023476.1| carbon-phosphorus lyase complex accessory protein [Methylibium petroleiphilum PM1] gi|124262218|gb|ABM97207.1| phosphonate metabolism protein [Methylibium petroleiphilum PM1] gi|124262252|gb|ABM97241.1| phosphonate metabolism protein [Methylibium petroleiphilum PM1] Length = 260 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 41/278 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP AC+ +P R S I T V+VD G Sbjct: 1 MRVTFLGTGAAGGVPLYGCTCVACERAARDPSRMRRPCSALIEHAG-----TRVLVDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + R ++DA++ TH H DH+ G+ LR + PI V+A PD + + + Sbjct: 56 TDLHE--RFVPGALDAIVLTHFHPDHVQGLFHLR---WGRGAPIPVHAPPD-AEGCADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P +++ + G + P+ H + + G+ Sbjct: 110 KH---------------PGLLDFQRLAKLEPQRIGALSFTPLPLVHSK-PTFGYAVQAED 153 Query: 180 --NVAYCTDVNAFPAESLEKLQ--NLDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 AY TD P ++ LQ D L +D + H +L IE + P Sbjct: 154 GARFAYLTDTLGLPPQTETFLQAWQADGLALDCSFPPQEAPPRGHNDWPMALDTIERVAP 213 Query: 233 KNAILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSS 268 + A LTH+ LD M+ + V A DG Q Sbjct: 214 RRAWLTHIGHALDAWMMQTNPALAGNVSVARDGEQIEL 251 >gi|72391292|ref|XP_845940.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175266|gb|AAX69411.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802476|gb|AAZ12381.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 391 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 122/367 (33%), Gaps = 103/367 (28%) Query: 6 HFTILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKI---------SRVSE 49 TI+G G S GVP I C DP P +RR SL I S + Sbjct: 25 SVTIVGSGVSTGVPVIGHLSSDCACAEAFRDPQGP-DRRNNVSLLITVRDAECTGSDSED 83 Query: 50 RGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY------- 98 + V++D G F R +V +D +L TH HAD G+D LR Sbjct: 84 DRNAKHVLIDCGKTFRDAYFRVLAKHKVRYLDGLLLTHDHADAAGGVDDLRDLQRVTVDD 143 Query: 99 ---FLKQKRPIDVYAAPDCMKHLFESFRYCFK---------------------------- 127 ++ I YA+ ++ L + F Y + Sbjct: 144 VSKCCTIEQYISTYASEKTIESLRQQFGYIVRNSWLMGPAPSTAEEHELVVKRMREDRER 203 Query: 128 --ALDDRTYPPIVNPIVIENNDV---PICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN- 180 D+ Y + D + G + +HG+ SLGF FG Sbjct: 204 EGQTDNIGYRRSAALHLYTLPDTYPSSFYIPGFGENFPMYALPVEHGKGYMSLGFVFGRG 263 Query: 181 ----------------VAYCTDVNAFPAESLEKLQNL---DFLIIDAL--KNGLHSSHFS 219 V Y +DV+ P ++ L++L D L +D L H SH+ Sbjct: 264 VALRSTGASSCNGYSCVVYLSDVSEIPPNAMSFLRDLVKIDVLFVDMLYGPEVSHPSHYC 323 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFDG 263 + ++L+ + + P M+ D+ + + R V +DG Sbjct: 324 MDDTLQLVCELQPARTYAIGMYCDIKHAAGNRLLKERLEELRGAGKCGDGVITVELGYDG 383 Query: 264 MQFSSPI 270 M + P+ Sbjct: 384 MTMALPL 390 >gi|261329426|emb|CBH12407.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 391 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 76/367 (20%), Positives = 121/367 (32%), Gaps = 103/367 (28%) Query: 6 HFTILGCGASLGVPRITGDWGAC-------DPTNPKNRRTRSSLKISRVSERGSN----- 53 TI+G G S GVP I C DP P +RR SL I+ + Sbjct: 25 SVTIVGSGVSTGVPVIGHLSSDCACAEAFRDPQGP-DRRNNVSLLITVRDAECTGSDSED 83 Query: 54 ----TTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGY------- 98 V++D G F R +V +D +L TH HAD G+D LR Sbjct: 84 DRNAKHVLIDCGKTFRDAYFRVLAKHKVRYLDGLLLTHDHADAAGGVDDLRDLQRVTVDD 143 Query: 99 ---FLKQKRPIDVYAAPDCMKHLFESFRYCFK---------------------------- 127 ++ I YA+ ++ L + F Y + Sbjct: 144 ASKCCTIEQYISTYASEKTIESLRQQFGYIVRNSWLMGPAPTTAEEHELVVKRVREDRER 203 Query: 128 --ALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN- 180 D+ Y + + + + G + +HG+ SLGF FG Sbjct: 204 EGQTDNIGYRRSAALHLYTLPDTHPSSFYIPGFGENFPMYALPVEHGKGYMSLGFVFGRG 263 Query: 181 ----------------VAYCTDVNAFPAESLEKLQNL---DFLIIDAL--KNGLHSSHFS 219 V Y +DV+ P ++ L +L D L +D L H SH+ Sbjct: 264 VALRSTGASSCNGYSCVVYLSDVSEIPPNAMSFLHDLVKIDVLFVDMLYGPEVSHPSHYC 323 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----------------VVPAFDG 263 + ++L+ + + P M+ D+ + + R V +DG Sbjct: 324 MDDTLQLVCELQPARTYAIGMYCDIKHAAGNRLLKERLEELRGAGKCGDGVITVELGYDG 383 Query: 264 MQFSSPI 270 M + P+ Sbjct: 384 MTMALPL 390 >gi|223992599|ref|XP_002285983.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220977298|gb|EED95624.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 309 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 68/303 (22%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSN------------TTVIVDTGPDFYMQVLRE----Q 72 DP K+ R SL I + + VI+D G F LR Sbjct: 12 DPKLNKDYRGNPSLMIVHKNNDTVDGKGSSGDKETKLQNVIIDVGKTFTENALRWMPQHG 71 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYF----------LKQKRPIDVYAAPDCMKHLFESF 122 SIDAV+ TH H D I G+D LRG+ Q+ P+ V+++ C++ L F Sbjct: 72 KTSIDAVVLTHEHMDAIAGLDDLRGFQMLPTKDPKTGYPQQTPLPVFSSKLCLEVLKRQF 131 Query: 123 RYCFKALDD---------------RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 Y F D R Y ++ V+E+ P + +P+ Sbjct: 132 FYLFPKEDGGSSAGETTLADGSKIRRYVSKLDFRVVESF-KPFVAAG----LRMVPLPVM 186 Query: 168 HGR-ISSLGFRFG-----------NVAYCTDVNAFPAES----LEKLQNLDFLIIDALKN 211 HG + G+ F NV Y +D++ PAE+ +E+L +D L++D+L Sbjct: 187 HGEDLVCNGYAFSVDGGKSGNKTLNVVYLSDISRMPAETERFIMEELPPIDVLVVDSLNL 246 Query: 212 G-LHSSHFSLSESLKKIELINPKNAILTHMHVD--LDYDMVLKSTPS---RVVPAFDGMQ 265 + +H++ E+LK + + P+ + M D L + + K ++ A+DG+ Sbjct: 247 SNPNPTHYTFEEALKLVRKLKPERTFVVGMSCDLFLPHHEMNKQLAELDIKIELAYDGLV 306 Query: 266 FSS 268 Sbjct: 307 VKV 309 >gi|209518588|ref|ZP_03267407.1| phosphonate metabolism protein PhnP [Burkholderia sp. H160] gi|209500952|gb|EEA00989.1| phosphonate metabolism protein PhnP [Burkholderia sp. H160] Length = 268 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 99/276 (35%), Gaps = 45/276 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP D AC P R S I + R +VD Sbjct: 2 MRITFLGTGAAGGVPLYGCDCPACTRARAVPACVRRPCSALIETDTTRVLLDAGLVDLSE 61 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--MKHLFE 120 F S+DA++ TH H DH+ G+ LR +PI +A PD L+ Sbjct: 62 RFPA-------GSLDAIVLTHFHPDHVQGLFHLR---WGVGKPIPTWAPPDSNGCADLYR 111 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 NP ++ N G + + H + + G+ Sbjct: 112 ------------------NPGLLAFNHAEKFGTFDVGGLRFTALPLIHSK-PTFGYAIEG 152 Query: 179 ---GNVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKNGL--HSSHFSLSESLKKIELIN 231 AY TD P +L+ LQ L +D ++H + +E + Sbjct: 153 PDGERFAYLTDTIGLPPSTLDWLQRWGPFSLALDCSFPPRAQPANHNDWDTACALVEQMR 212 Query: 232 PKNAILTHMHVDLDYDMVLKS---TPSRVVPAFDGM 264 P+ LTH+ LD ++ +S P V+ A DGM Sbjct: 213 PERTWLTHVSHGLDTWLLEQSESAMPEGVLIAHDGM 248 >gi|328857734|gb|EGG06849.1| Hypothetical protein MELLADRAFT_124040 [Melampsora larici-populina 98AG31] Length = 429 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 117/366 (31%), Gaps = 107/366 (29%) Query: 5 YHFTILGCGASLGVPRITG------DWGACDPTNPK-------NRRTRSSLKISRV---- 47 LG G S +P + C K ++R +S + + Sbjct: 54 LEMIFLGTGPSSQIPDVGCVLGPDGPCAGCKLAMVKSSNSPVLDKRGNTSAILRFIPPTL 113 Query: 48 --SERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++ + T+++D G F L ++ IDAVL THPHAD I G+D LR + Sbjct: 114 DGKQKSTPKTILIDVGKSFRNAALEFFPPNKLSKIDAVLLTHPHADAIFGLDDLRPWTAN 173 Query: 102 QKRP------IDVYAAPDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMK 153 R + +Y + F Y + P + E D P+ + Sbjct: 174 AHRNKAIQKTVPIYCDQHTFLEINRMFPYMTHPSSATGGGHVPAFEWHIFE-KDKPLDLF 232 Query: 154 SAGGVIEAIPILQQHGRI---------SSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDF 203 + P+ HG + GF F + Y +DV++ P + L +L Sbjct: 233 G----LHVTPLTAHHGTMGHGKDLRPHECAGFLFNRSILYMSDVSSIPESTWATLASLGV 288 Query: 204 ------------------LIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 L+ID L+ +SH + ++LK + K L + + Sbjct: 289 HNSMTSTAHLQSHLSLPILVIDTLRLTTRASHLGIGDALKVAHRLGAKRTYLVGLEHGIT 348 Query: 246 YDMVLKST-------------------------------------------PSRVVPAFD 262 ++ ++ P V PAFD Sbjct: 349 HESWERACKAFGEEIPNIDKKQIDTQMRLVDIGKDPELFHRTALYMGKPKRPMWVRPAFD 408 Query: 263 GMQFSS 268 G++ S+ Sbjct: 409 GLRIST 414 >gi|88603582|ref|YP_503760.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189044|gb|ABD42041.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 240 Score = 179 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 107/273 (39%), Gaps = 42/273 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILG G ++G P + C R R+SL I+ + +I+DT PD Sbjct: 1 MEIRILGSGDAVGTPHVGCHCKNCTYAREAGIERLRTSLLIT-----NEDRHLIIDTTPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L+ IDAV++TH H DH G F + +R VY AP+ + Sbjct: 56 LRRQLLQAGSPKIDAVIWTHGHYDHFMGFGD----FYRVQRIPPVYGAPEVLASC----- 106 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 P+ + ++ E V + +E + +H I + G + Sbjct: 107 -----------SPVFHFLIREERPVEVYTPFITCGLEVTLVRVEHPNIYTTGVIISDGRT 155 Query: 181 -VAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGLHS---SHFSLSESLKKIELINPKNA 235 + Y +D N P +S + L+ +D L ID L + H + E+++ + + K+ Sbjct: 156 RIGYTSDTNELIPPKSRDLLRGVDMLFIDGLFTDSYKKVEKHLNYEEAIRLAKELKVKDF 215 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + HM + +D + DG F+ Sbjct: 216 RIVHMSHIIPFDAPGQ--------GHDGEVFTL 240 >gi|226356374|ref|YP_002786114.1| metallo-beta-lactamase family protein [Deinococcus deserti VCD115] gi|226318364|gb|ACO46360.1| putative Metallo-beta-lactamase superfamily protein [Deinococcus deserti VCD115] Length = 263 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 102/284 (35%), Gaps = 36/284 (12%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPK--NRRTRSSLKISRVSERGSNTTVIV 58 M T LG S GVPR C NRRTR+ L + + TV+ Sbjct: 1 MSSAPTLTFLGTADSKGVPRFWCGCAVCTEARAGGCNRRTRTGLLLRAAGQ-----TVLF 55 Query: 59 DTGPDFYMQVLREQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D D + Q+ R + DA L +H H DH+ G+ L Y + + VYA + Sbjct: 56 DASADLHAQLARLPEPVVPDAALISHAHNDHLLGLGDLLDYVHYARGSLQVYAPQTTLPD 115 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGF 176 + F Y F+A P + AG + A HG S F Sbjct: 116 IQARFAYAFRASAPVRVLP------------EDGVMLAGLSLRA--FQVPHGANGQSHAF 161 Query: 177 RFGNVAY----CTDVNAFPAESLE-KLQNLDFLIIDAL------KNGLHSSHFSLSESLK 225 R + TD P+E LQ+LD L++ S + + E+L+ Sbjct: 162 RLERPGWAAVIMTDAIDVPSEIAGVWLQDLDLLVLGTSFADESGSPRSGRSVYDIQEALE 221 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 +LTH+ +D V+ P A+DG+ + Sbjct: 222 LPWARAAGRVVLTHLSHGVDARAVV--LPEGWSLAYDGLSVTLE 263 >gi|331007766|ref|ZP_08330888.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] gi|330418426|gb|EGG92970.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] Length = 255 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 38/276 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 F LG G + VP AC+ RR S KI +++D G Sbjct: 1 MQFQFLGTGNAAQVPCYGCRCPACERAMNVTTFRRGPCSAKIQV-----GEKNILIDAGH 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + R V +I+ +L TH H DH+ G+ LR + PI V D E Sbjct: 56 TNLTE--RFPVGTINTILLTHYHMDHVQGLFPLR---WGKATPIPVIGPDD-----KEGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 FK + P P+ + IE P+ H + ++G+ F + Sbjct: 106 DDLFKHPGMLHFLPAPECF------KPLYLLG----IEITPVPLNHSK-PTVGYFFNDGE 154 Query: 181 --VAYCTDVNAFPAESLEKLQN--LDFLIIDAL-KNGLHS-SHFSLSESLKKIELINPKN 234 +AY TD P ++++ LQ D +IID + +H +L+E+L IE + P+ Sbjct: 155 SSLAYLTDTLGLPEKTMDFLQQQRPDIVIIDCSSPPKPNPRNHNTLNEALDIIEHLAPQK 214 Query: 235 AILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSS 268 LTH+ +LD ++ + P V+ A D + + Sbjct: 215 GYLTHISHELDAFLLSANYPLPDNVIVAADNEKIDT 250 >gi|297609349|ref|NP_001062995.2| Os09g0363800 [Oryza sativa Japonica Group] gi|255678837|dbj|BAF24909.2| Os09g0363800 [Oryza sativa Japonica Group] Length = 377 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 103/297 (34%), Gaps = 79/297 (26%) Query: 2 KDYYHFTILGCGASLGVPRITG------DW-----------GACDPT---NPKNRRTRSS 41 + LG G S G+PR++ C +NRR +S Sbjct: 94 RQQSELIFLGTGTSEGIPRVSCLTNPSKTCTVRPPSSLQQRDVCTKAAEPGNRNRRRNTS 153 Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRG 97 + + + G+ +++D G FY L+ + +IDAV+ TH HAD I G+D LR Sbjct: 154 ILLRHATPSGT-ANILIDAGKFFYHSALQWFPAYGLRTIDAVIITHSHADAIGGLDCLRD 212 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + I +Y A + + + Y + + P + + Sbjct: 213 WTNNVQPTIPIYVAERDYEVMKMTHYYLIDTSVVIPGAAVSALQFNIIKEEPFTVHN--- 269 Query: 158 VIEAIPILQQHGR-ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 +E IP+ HG+ SLGFRFG Sbjct: 270 -LEVIPLPVWHGQGYRSLGFRFGR------------------------------------ 292 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 +L+++ I PK + T M +D++ V + ++DG++ Sbjct: 293 ------ALEEVRKIKPKKTLFTGMMHLMDHEKVNNELAKLMETEGLDIQLSYDGLRV 343 >gi|123440844|ref|YP_001004835.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087805|emb|CAL10591.1| PhnP protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 255 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 101/281 (35%), Gaps = 44/281 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP C P RR S + E T ++D G Sbjct: 1 MELTLLGTGCAQQVPVFGCQCVICTKARLKPALRRQSCSAMLRYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q+ I L TH H DH+ G+ LR I VY PD + Sbjct: 56 PALEQLFAGG--QIQRFLLTHYHMDHVQGLFPLRWGC---GNAIPVYGPPD-----PDGC 105 Query: 123 RYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 +K + PP+ I+ G + P+ H +I + G+ + Sbjct: 106 DDLYKHPGILAFQPPLSAFHPIQ-----------FGDLRVTPVPLNHSKI-TFGYLLQSP 153 Query: 181 ---VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLH--------SSHFSLSESLKKI 227 +AY TD PA+S L +N+D L+ D H +H ++ +L Sbjct: 154 NRTIAYLTDTIGLPADSALFLASKNIDLLVQDCSHPPHHLSPHRPPPRNHNDVTMALAIS 213 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 EL+ P +LTH+ LD + + P V A D S Sbjct: 214 ELLKPAATLLTHISHQLDSWALDNTLPDGVTIAQDNQIISL 254 >gi|328857805|gb|EGG06920.1| Hypothetical protein MELLADRAFT_124039 [Melampsora larici-populina 98AG31] Length = 430 Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 115/366 (31%), Gaps = 104/366 (28%) Query: 2 KDYYHFTILGCGASLGVPRITG------DWGACDPTNPK-------NRRTRSSLKISRV- 47 LG G S +P C K ++R +S + V Sbjct: 59 TTNLEMIFLGTGPSGRIPEAGCILGPEGPCAGCKLAMAKSTDSPVFDKRGNTSAILRFVP 118 Query: 48 -----SERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +E+ + T+++D G F L R + IDAVL THPHAD G+D LR + Sbjct: 119 PTLDKNEKATPKTILIDAGKSFQTSALELFKRNGLSKIDAVLLTHPHADASLGLDDLRSW 178 Query: 99 F---LKQKRPIDVYAAPDCMKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMK 153 ++ + +Y D + + F Y P + E + P+ + Sbjct: 179 TSGANPIQKTMAIYCDQDTFLTIKQMFPYMIDPSTATGGGSVPTFQWNIFE-REKPLDLF 237 Query: 154 SAGGVIEAIPILQQHGRI---------SSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDF 203 + P+ HG + GF F + Y +DV++ P + L +L Sbjct: 238 G----LRVTPLTTHHGTVGQGQDARPYECAGFLFDRSIVYMSDVSSIPESTWTALASLGV 293 Query: 204 ------------------LIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 L+ID L+ SHF + ++L + + L + Sbjct: 294 PSSIPSETHPQPRPSLPILVIDTLRLVTRPSHFGIEDALNTAHRLGAQKTYLVGFEHGVT 353 Query: 246 YDMVLK-------------------------------------------STPSRVVPAFD 262 + + +P V PAFD Sbjct: 354 HKSWERACKAFGEGIPNIDKKEVNTQMRLVDIGKDPELFHRTALYMGKPKSPMWVRPAFD 413 Query: 263 GMQFSS 268 G++ S+ Sbjct: 414 GLKIST 419 >gi|307130354|ref|YP_003882370.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Dickeya dadantii 3937] gi|306527883|gb|ADM97813.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Dickeya dadantii 3937] Length = 249 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 37/270 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +G G + VP D AC+ +P+ RR SS+ + E ++D G Sbjct: 1 MELMFMGTGDAQQVPLTGCDCIACERARLDPRFRRGPSSMLVRCDGE-----ATLLDAGV 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R V I +L TH H DH+ G+ LR I V+ PD + Sbjct: 56 TQLEQ--RFGVNEIRRILLTHYHVDHVQGLFSLR---WGIGDRIPVFGPPD-----EQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 +K + P + P A G + + H + + G+ Sbjct: 106 DDLYKHPRRLDFQPAMTPF----------QTVAMGALRVTALPLNHSK-PTFGYLLEHGG 154 Query: 180 -NVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +VAY TD P ++L+ L + LD +++D ++ +H L+ L+ E + P Sbjct: 155 QSVAYLTDTCGLPDDTLDFLCGKPLDHMVMDCTQPPRDQPPLNHSDLNTVLRVREQLRPT 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 LTH+ + D ++ + P V A DG Sbjct: 215 QTWLTHVSHETDAWLMQNNLPDGVRAAADG 244 >gi|66045499|ref|YP_235340.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. syringae B728a] gi|63256206|gb|AAY37302.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] Length = 250 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 109/275 (39%), Gaps = 39/275 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC + + RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFERRALGALQVTALPLTHSK-PTFGYLFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 AY TD P ++ E LQ LD L++D + +H L+ +L+ IE + P Sbjct: 155 QRFAYLTDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPG 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDGMQF 266 A+LTH+ LD ++ K P VV DGM Sbjct: 215 RAVLTHVGHTLDAWLMEHSKQLPGNVVVGRDGMTV 249 >gi|120537176|ref|YP_957233.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120553167|ref|YP_957518.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120323016|gb|ABM17331.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] gi|120327011|gb|ABM21318.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 261 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 67/280 (23%), Positives = 109/280 (38%), Gaps = 46/280 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G + GVPR AC N ++ R S I SN +++D G Sbjct: 1 MRVTFLGTGGAGGVPRFGCTCPACQRAKTNHRHVRRPCSALIE-----DSNHKILLDAGL 55 Query: 63 -DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + R + + A++ TH H DH+ G+ LR + I VY PD + Sbjct: 56 MDLHD---RFEPGELSAIVLTHYHPDHVQGLLHLR---WGKGESIPVYGPPD-----PDG 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F FK +P +++ +D+ G P+ H ++ + G+ Sbjct: 105 FTDLFK-----------HPGILDISDLSAFQALELGEFSLTPMPLNHSKL-TFGYAIAHR 152 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD--FLIIDALKN------GLHSSHFSLSESLKKIE 228 AY TD P ES + L+ + +D +H ++ +L IE Sbjct: 153 NGARFAYLTDTLGLPEESADYLRQWRPGHIAVDCSHPPADVSGKAPQNHNDVTAALAMIE 212 Query: 229 LINPKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 + LTH+ + D ++ + P+ V PA DG+ F Sbjct: 213 QSGAEQGWLTHLGHETDCWLMANASALPNNVTPAADGLCF 252 >gi|332160109|ref|YP_004296686.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607330|emb|CBY28828.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325664339|gb|ADZ40983.1| carbon-phosphorus lyase complex accessory protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 255 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 101/281 (35%), Gaps = 44/281 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP C P RR S + E T ++D G Sbjct: 1 MELTLLGTGCAQQVPVFGCQCVICTKARLQPTLRRQPCSAMLHYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q+ I L TH H DH+ G+ LR I VY PD + Sbjct: 56 PALDQLFAGG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNAIPVYGPPD-----PDGC 105 Query: 123 RYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 +K + PP+ I+ G + P+ H +I + G+ + Sbjct: 106 DDLYKHPGILAFQPPLSAFHPIQ-----------FGDLRVTPVPLNHSKI-TFGYLLQSP 153 Query: 181 ---VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLH--------SSHFSLSESLKKI 227 +AY TD PA+S L +N+D LI D H +H ++ +L Sbjct: 154 NRTIAYLTDTIGLPADSALFLASKNIDLLIQDCSHPPHHFSPHRPPPRNHNDVTMALAIS 213 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 EL+ P +LTH+ LD + + P + A D S Sbjct: 214 ELLKPAATLLTHISHQLDTWALDNTLPDGITIAQDNQIISL 254 >gi|328855342|gb|EGG04469.1| Hypothetical protein MELLADRAFT_78359 [Melampsora larici-populina 98AG31] Length = 410 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 108/344 (31%), Gaps = 101/344 (29%) Query: 4 YYHFTILGCGASLGVPRITGD------WGACDPTNP----KNRRTRSSLKISRVSERG-- 51 ILG G S VP I+ C T KN R +S + + Sbjct: 3 SLEIMILGSGTSSQVPVISCLISKDKACTCCLSTRSPTGSKNIRRNTSAILRITNPSNQS 62 Query: 52 ---------SNTTVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + T+++D G F ++ +IDAVL THPHAD I+G+D LR + Sbjct: 63 TQNDQNPMTTPKTILIDVGKSFCEAARQHFPINELSTIDAVLLTHPHADAINGLDDLRAW 122 Query: 99 FLK--QKRPIDVYAAPDCMKHLFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKS 154 L + I +Y + F Y + + P +IE+ P + Sbjct: 123 TLDAVIQPSIPIYCDKFTFSEVERMFPYMVNSANATGGGDVPAFQWNIIEDGQ-PFDLFG 181 Query: 155 AGGVIEAIPILQQH-----------GRISSLGFRFGN-VAYCTDVNAFPAESLEKL---- 198 + P+ H G L F F + Y +DV++ P + L Sbjct: 182 ----VRISPLKVNHGCYFGPTGAVEGPYGCLAFLFDRSICYMSDVSSIPESTYAALGVLP 237 Query: 199 -------------------QNLD--------------------------------FLIID 207 + D LIID Sbjct: 238 PTSSTSSPAPIHLSPNMAIEGSDTDSDITRSTSPVSTAATSLDSEPIPMGVPPLPILIID 297 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 L+ H+SHF L+E++ + + L + ++ K Sbjct: 298 TLRLKPHTSHFGLAEAVSTASRLGAQRTYLLGFTHGVTHECWEK 341 >gi|288931203|ref|YP_003435263.1| ATP-binding protein PhnP (PhnP) [Ferroglobus placidus DSM 10642] gi|288893451|gb|ADC64988.1| ATP-binding protein PhnP (PhnP) [Ferroglobus placidus DSM 10642] Length = 252 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 98/243 (40%), Gaps = 26/243 (10%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G S G P I C+ R R S+ + ++VDT PD Sbjct: 1 MRVVLLGTGDSPGTPVIGCHCQTCEDARKNGWERKRFSVLVQ-----NEGRNILVDTSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESF 122 Q+LR V +DAV++TH H DH G F + + ++VY +P+ + + F Sbjct: 56 MRTQLLRMNVDKVDAVIWTHCHYDHFAGFGD----FYRVQSNVNVYTSPEVHEDIGRFMF 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 ++ + Y P ++ + P+ + HG + G V Sbjct: 112 FMKYRPFEVEAYEPF----------KIFGLEFTLFDVNHPPLRRAHGVVIRKGGI--KVV 159 Query: 183 YCTDVNA-FPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILTH 239 D N+ P S++++ N D I+DA+ + H + SE+L + I K + TH Sbjct: 160 VSGDTNSNIPQRSIKEMMNPDLFIVDAIAPAGYKLKKHMNASEALSLAKKIKAKKVVFTH 219 Query: 240 MHV 242 + Sbjct: 220 VGH 222 >gi|229589306|ref|YP_002871425.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas fluorescens SBW25] gi|229361172|emb|CAY48036.1| phosphorous compounds metabolism-related protein [Pseudomonas fluorescens SBW25] Length = 249 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 39/272 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGAC--DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP + AC ++ RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCECPACGLARSDASLRRRPCSALIECADQRWLIDSGLPDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S + +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSFNGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLSDLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + G + + QH + +LG+ Sbjct: 110 KH----------PGILDF----SQPFSEFETRQFGPLSVTALPLQHSK-PTLGYLLEGEG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +AY TD P +L LQ LD L++D + +H L+ +L+ IE + Sbjct: 155 RRIAYLTDTVGQPPATLAWLQREPLDVLVLDCSMPPQPQAPRNHNDLTLALQSIEDTGAQ 214 Query: 234 NAILTHMHVDLDYDMVL--KSTPSRVVPAFDG 263 +LTH+ LD ++ + P V +DG Sbjct: 215 LGVLTHVGHTLDAWLLEHRRELPRHVSIGWDG 246 >gi|298713832|emb|CBJ27204.1| conserved unknown protein [Ectocarpus siliculosus] Length = 494 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 106/268 (39%), Gaps = 27/268 (10%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNT---TVIVDTGPDFYMQVLRE----QVLSIDAVLY 81 D + R+++S SE SNT V +DTG + +R V +D ++ Sbjct: 228 DSDGDSDGRSQASQSEEVTSEGRSNTQVKHVQIDTGKTWREGAIRWFPRHGVRGLDGIVL 287 Query: 82 THPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH HAD + G+D +R +KR P V+ + + + F Y DD Sbjct: 288 THDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNG-AGGRFV 346 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFG----NVAYCTDVNAFPAESL 195 + N G +E P HG S GF FG + Y +DV+ P ES+ Sbjct: 347 AALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESM 406 Query: 196 EKLQN---LDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 E L+ + L+ DAL + H +HF + +S+ + + +L + D++Y Sbjct: 407 EFLEKHGPMQLLVCDALMVSKKHRTHFCVEDSVVLAGQLKARRTLLVGLGSDIEYHATNA 466 Query: 252 STP---------SRVVPAFDGMQFSSPI 270 V A+DG+ + Sbjct: 467 MLASREEEELGMPHVRLAYDGLAVDVDL 494 >gi|71652712|ref|XP_815007.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70880029|gb|EAN93156.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 345 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 112/335 (33%), Gaps = 68/335 (20%) Query: 1 MKDYYHFT---ILGCGASLGVPRITG-----DWGAC-----DPTNPKNRRTRSSLKISRV 47 M F I+G G+S P ++ C DP + KN R S I Sbjct: 1 MSTELSFVRGLIVGSGSSTATPMLSCITGASPCSTCTEALKDPQHSKNHRLNVSFLIQLR 60 Query: 48 SE-RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V++D G F ++ V + AVL TH HAD I GID LR + Sbjct: 61 HPADYSLHNVLIDCGKTFRESAMKVFPAVGVSDLSAVLLTHDHADAIFGIDELREFNRP- 119 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKA----------LDDRTYPPIVNPIVIENNDVPI-- 150 P+DVYA + + Y F Y ++ V + + + Sbjct: 120 DIPLDVYADERTDSSIRRVYPYLFPKDGSPGVGEWRKKKTGYVASISGHVFKPLEKLVLN 179 Query: 151 ----------CMKSAGGVIEAIPILQQHG-RISSLGFRF-----GN----VAYCTDVNAF 190 + A G +PI HG + F GN + Y +D++ Sbjct: 180 ICCRTPPPSGGDEPAMGFWSVVPIAVPHGVNYDANAFLLPMHTSGNKPRLLLYVSDISTL 239 Query: 191 PAE-------SLEKLQNLD-----FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + + E L D L++D L + SH ++ S+ I Sbjct: 240 EEKFFTDLARAKELLGVPDSVPIEVLVLDMLSRKPYFSHLNVDASIAAACKIQAGKTYFV 299 Query: 239 HMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSS 268 M L++D + K R+ FDG S Sbjct: 300 GMSHSLNHDELKKELQELGLSNRMWVGFDGCVVSI 334 >gi|317493648|ref|ZP_07952069.1| phosphonate metabolism protein PhnP [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918591|gb|EFV39929.1| phosphonate metabolism protein PhnP [Enterobacteriaceae bacterium 9_2_54FAA] Length = 262 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 97/277 (35%), Gaps = 37/277 (13%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDT 60 T LG G + VP + AC P RR S + + D Sbjct: 2 STLKLTFLGTGGAQQVPAFGCECAACLRAQQQPSYRRKPCSAMLEYNGALTLLDAGLHDL 61 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 R I L TH H DH+ G+ LR I VY PD Sbjct: 62 TE-------RFTPTQISQFLLTHYHMDHVQGLFPLR---WGMGAAIPVYGPPD-----EL 106 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 FK +P +++ N P ++ ++ P+ H ++ + G+ Sbjct: 107 GCDDLFK------HPGMLDFNHRLNAFEPFYLQ----ELQVTPLPLNHSKL-TFGYLLAT 155 Query: 180 ---NVAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 +AY TD P +L L Q + +IID + +H L+ ++ + I Sbjct: 156 PDRRIAYLTDTAGLPESTLNVLRHQPPEIIIIDCSYEPRAFTPKNHNDLNTVVELQKEIG 215 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH+ D M+ + P + A DG+ ++ Sbjct: 216 CQKIWLTHISHQFDLWMMENALPKGIEAARDGLTLTA 252 >gi|331231750|ref|XP_003328538.1| hypothetical protein PGTG_10497 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307528|gb|EFP84119.1| hypothetical protein PGTG_10497 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 412 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 105/334 (31%), Gaps = 93/334 (27%) Query: 2 KDYYHFTILGCGASLGVPRITG--------DWGACDPT------NPKNRRTRSSLKISRV 47 + ILG G S VP I+ C T KN R +S + Sbjct: 3 STKFDVIILGSGTSSQVPVISCLVAKPPSKGCECCLSTLAADGSGRKNVRRNTSAIVRFQ 62 Query: 48 SERGSNT--TVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + T+++D G F + + IDAV THPHAD I+G+D LR + L Sbjct: 63 SNQNPERPSTILIDVGKSFCEAAREHFPKHGLDIIDAVFLTHPHADAINGLDDLRAWTLG 122 Query: 102 --QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGG 157 + I +Y + + F Y P +IE +D+P + Sbjct: 123 AVIQATIPIYCNQTTFDEVAKIFPYMVNPGGGTGGGDVPAFQWHIIE-SDIPFELLG--- 178 Query: 158 VIEAIPILQQHG-----------RISSLGFRFG-NVAYCTDVNAFPAESLEKL------- 198 ++ P+ HG L F F Y +DV++ P + L Sbjct: 179 -VQVSPLKVHHGCYFNTSGHPSSPYECLAFLFDQTFCYMSDVSSIPESTWTALGCPPNAP 237 Query: 199 ---------------------------------------------QNLDFLIIDALKNGL 213 L LI+D ++ Sbjct: 238 TIRRSMSNLTTKSFDSDNPSVSTTSSRLGSLHSSASSVSDCEGPPAGLPLLIVDTMRLKP 297 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 H SHF ++++++ + + + ++ Sbjct: 298 HISHFGIADAVETAVKLRAHRTYILGFTHGVTHE 331 >gi|326488929|dbj|BAJ98076.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 283 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 96/240 (40%), Gaps = 37/240 (15%) Query: 3 DYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSE 49 LG G S +P C P N R +SL + + Sbjct: 12 GSSSLIFLGTGCSGALPDARCLLKPSTPPCAVCSMGISLPPEGNPNYRLNTSLLVDYCHD 71 Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G++ +++D G F QVLR +V +D+++ TH HAD + G+D + + R Sbjct: 72 DGTHKYILIDIGKTFREQVLRWFVHHKVPYVDSIILTHEHADAVLGLDEVWVVQPRNGRN 131 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGG 157 I ++ M + F Y + + ++ +IE DV ++G Sbjct: 132 DVEQIPIFLTQFTMDSIARRFPYLVEQKPEDGDEDAQAAKIDWKIIEE-DVDKPFVASG- 189 Query: 158 VIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAF-PAESLEKLQ----NLDFLIIDA 208 +E +P+ HG LGF FG VAY +DV+ F P L+ +D LI++A Sbjct: 190 -LEFVPLPVMHGEGYICLGFLFGRRARVAYLSDVSRFLPETEHAILKSGAGQVDLLILEA 248 >gi|322815523|gb|EFZ24165.1| hypothetical protein TCSYLVIO_9710 [Trypanosoma cruzi] Length = 345 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 113/335 (33%), Gaps = 68/335 (20%) Query: 1 MKDYYHFT---ILGCGASLGVPRITG-----DWGAC-----DPTNPKNRRTRSSLKISRV 47 M F I+G G+S P ++ C DP + KN R S I Sbjct: 1 MSTELSFVRGLIVGSGSSAATPMLSCINGASPCSTCTEALKDPQHSKNHRLNVSFLIQLR 60 Query: 48 SE-RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V++D G F ++ V + AVL TH HAD I GID LR + Sbjct: 61 HPADYSLHNVLIDCGKTFRESAMKVFPAVGVSDLSAVLLTHDHADAIFGIDELREFNRP- 119 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKA----------LDDRTYPPIVNPIVIENNDVPI-- 150 P+DVYA + + Y F Y ++ V + + + Sbjct: 120 DIPLDVYADERTDSSIRRVYPYLFPKDGPPGVGEWRKKKTGYVASISGHVFKPLEKLVLN 179 Query: 151 ----------CMKSAGGVIEAIPILQQHG-RISSLGFRF-----GN----VAYCTDVNAF 190 + A G +PI HG + F GN + Y +D++ Sbjct: 180 ICCRTPPPSGGDEPAMGFWSVVPIAVPHGVNYDANAFLLPMHTSGNKPRLLLYVSDISTL 239 Query: 191 PAE-------SLEKLQNLD-----FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + + E L D L++D L + SH S+ S+ I Sbjct: 240 EEKFFTDLARAKELLGVPDSVPIEVLVLDMLSRKPYFSHLSVDASIAAACKIQAGKTYFV 299 Query: 239 HMHVDLDYDMVLKS-----TPSRVVPAFDGMQFSS 268 M L++D + K +R+ FDG S Sbjct: 300 GMSHSLNHDELKKELQALGLSNRMWVGFDGCVVSI 334 >gi|74318306|ref|YP_316046.1| carbon-phosphorus lyase complex accessory protein [Thiobacillus denitrificans ATCC 25259] gi|74057801|gb|AAZ98241.1| phosphonate metabolism protein, PhnP [Thiobacillus denitrificans ATCC 25259] Length = 255 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 99/272 (36%), Gaps = 41/272 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP D AC RR + I T +++D G Sbjct: 1 MRVTFLGTGAAGGVPLYGCDCPACTRARAVVDFRRQPCTALIEA-----GETRILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ A++ TH H DH+ G+ LR + I VY PD E Sbjct: 56 TDL--AERFPSGSLSAIVLTHFHPDHVQGLFPLR---WGIGKNIPVYGPPD-----SEGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 +K ++E + G + P+ H + ++ G+ + Sbjct: 106 ADLYKNHG-----------LLEFRRLSKFEPVTIGNLVLTPLPLIHSK-ATFGYAIEDTD 153 Query: 181 ---VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 AY TD P + L+N +D ++ L +H L+ +L E + P Sbjct: 154 GQRFAYLTDTAGLPPRTEAFLKNWRPASFALDCSYPPQSDLPRNHNDLTLALTIAETLAP 213 Query: 233 KNAILTHMHVDLDYDMVLK--STPSRVVPAFD 262 LTH+ +LD ++ P + A+D Sbjct: 214 AKVWLTHVSHELDAWLLENIGDLPPHMAVAYD 245 >gi|301063233|ref|ZP_07203782.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300442661|gb|EFK06877.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 310 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 96/260 (36%), Gaps = 43/260 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G + GVP I D C K RR R+S+ + ++ T+++D GPD Sbjct: 2 MDITFLGTGGAWGVPEINCDCAICREMRAKGERRDRTSILL-----ADNDATLLIDCGPD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------KRPIDVYAAPDCMKH 117 Q+ R +V IDAVL +H H DH G+D L + K+ PI VY + Sbjct: 57 AREQLRRNKVKKIDAVLISHEHNDHYIGLDEL--FVYKRVLPNEVFSPIPVYLTHETRLV 114 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLG 175 + F Y VI+ ++ G P HG S+G Sbjct: 115 VEVRFAYL------------EELGVIKFKEIEPGQWFRQGPFRIFPFKTDHGTFAKGSVG 162 Query: 176 FRFG---------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH----SSHFSLSE 222 F + Y +D P +L D +I+ + H S Sbjct: 163 FMVQGTRHSGGNARLLYTSDFAEIPD-MPTELVGCDIVIMQSFWLNEPVDNRPKHMSFQN 221 Query: 223 SLKKIELINPK-NAILTHMH 241 ++ I+ + P+ L HM Sbjct: 222 AIGYIKRLKPRGETFLVHMG 241 >gi|194432323|ref|ZP_03064611.1| phosphonate utilization protein [Shigella dysenteriae 1012] gi|194419526|gb|EDX35607.1| phosphonate utilization protein [Shigella dysenteriae 1012] gi|320179102|gb|EFW54061.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Shigella boydii ATCC 9905] gi|332084279|gb|EGI89482.1| phosphonate metabolism protein PhnP [Shigella dysenteriae 155-74] Length = 252 Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + ACD P+ RR S + ++ ++D G Sbjct: 2 SLPLTLTGTGGAQGVPAWGCECAACDRARRSPQYRRQPCSGVVKF-----NDAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 --LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + SH L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D ++ + PS FDGM+ Sbjct: 216 PRVILTHISHQFDAWLMENALPSGFEAGFDGMEI 249 >gi|254164027|ref|YP_003047135.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli B str. REL606] gi|253975928|gb|ACT41599.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli B str. REL606] Length = 252 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T G G + GVP + AC P+ RR S + ++ ++D G Sbjct: 2 SLTLTFTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 --LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N +++D + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D ++ + PS FDGM+ Sbjct: 216 PRVILTHISHQFDAWLMENALPSGFEVGFDGMEI 249 >gi|50119449|ref|YP_048616.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium atrosepticum SCRI1043] gi|49609975|emb|CAG73413.1| putative phosphonate metabolism protein [Pectobacterium atrosepticum SCRI1043] Length = 261 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 40/271 (14%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG-PDFY 65 LG G + VP + C N RR I+ + +++D G P+ Sbjct: 16 FLGTGGAQQVPAFGCECEVCQQAQRNESKRRRACCAAITT-----KDRIILIDAGLPELS 70 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 +L +L TH H DH+ G+ LR + PI V+ PD Sbjct: 71 PYLLPYPQRH---ILLTHYHMDHVQGLFPLRWGY---GEPIPVFGPPD-----EAGCDDL 119 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----V 181 FK +P I++ P + I P+ H ++ + G+ + Sbjct: 120 FK------HPGILHFQKPLMAFQPFELDG----IRITPVPLIHSKL-TYGYLIQTPTHTL 168 Query: 182 AYCTDVNAFPAESLEKLQN--LDFLIIDALKNG---LHSSHFSLSESLKKIELINPKNAI 236 AY TD P E+ + L + LD+ I+D L +H ++ +L+ +NPK Sbjct: 169 AYLTDTIGLPPETTQFLASHTLDYAIVDCSHPPQTMLPRNHNDITRALEIFTQLNPKQLY 228 Query: 237 LTHMHVDLDYDMVLKS-TPSRVVPAFDGMQF 266 LTH+ +LD + ++ P V A+DG+ Sbjct: 229 LTHISHELDRWLQTQTLLPENVHAAYDGLVL 259 >gi|219853143|ref|YP_002467575.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219547402|gb|ACL17852.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 239 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 99/272 (36%), Gaps = 41/272 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT-NPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G ++G P+I C +R R+SL I + +++DT PD Sbjct: 1 MKLRLLGTGDAIGTPKIRCACPQCMEAYRTGEQRLRTSLLIEV-----DDRHLLIDTSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L IDAV++TH H DH G F + ++P VY A + +++ ++F Sbjct: 56 LRQQLLCAGSPEIDAVIWTHGHYDHFMGFGE----FYRVQKPPAVYGAAEVLEYCGQTFS 111 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 F + P + G I P+ H + G R + Sbjct: 112 --FLPFERHPVTPF------------KPFELLGMTITLFPV--NHPPAYTTGLRIEHQGT 155 Query: 181 -VAYCTDVN-AFPAESLEKLQNLDFLIIDAL-KNGLH-SSHFSLSESLKKIELINPKNAI 236 + Y D S LQ D L+ID + G H H + E+ + E K Sbjct: 156 VICYTADTRADLDPASRAMLQGADLLLIDGIVPPGFHIHKHMNYEEACQIAEESGAKEFR 215 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H+ + +D DG FS Sbjct: 216 CVHLSHRIPFDTP--------HAGHDGEMFSF 239 >gi|293417599|ref|ZP_06660221.1| phosphonate metabolism protein PhnP [Escherichia coli B185] gi|291430317|gb|EFF03315.1| phosphonate metabolism protein PhnP [Escherichia coli B185] Length = 252 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 101/274 (36%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + AC P+ RR S + + ++D G Sbjct: 2 SLPLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NEAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 LHDLTD--RWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L E+I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNEVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D ++ + P FDGM+ Sbjct: 216 PRVILTHISHQFDAWLMENALPPGFEAGFDGMEI 249 >gi|126180030|ref|YP_001047995.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862824|gb|ABN58013.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 242 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 45/269 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G ++G P+I D C R R R+S + +++++ PD Sbjct: 1 MQITLLGTGDAIGTPKIGCDCENCRAMVAAGRSRLRTSFLVEI-----EGKHILIESSPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+LR IDAVL++H H DH G F + ++ YAAP M Sbjct: 56 LRQQLLRASSPHIDAVLWSHGHYDHFIGFGE----FYRVQKVPPAYAAPPVMD------- 104 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 YC ++ + E + VP+ + H + + G + Sbjct: 105 YC---------SGYLHFLPFEKHPVPVYEPFDLFGVTFTFFEVNHPPVYTCGLLLEHDDV 155 Query: 181 -VAYCTDVN-AFPAESLEKLQ--NLDFLIIDALKNGLHS--SHFSLSESLKKIELINPKN 234 VAY D P S + LQ ++D L +DA+ ++ H + E+++ + ++ Sbjct: 156 AVAYTADTREDIPEASRDLLQKADIDLLFVDAIAPEGYNITKHMNYVEAVRFARGVGARD 215 Query: 235 AILTHMHVDLDYDMVLKSTPSRV-VPAFD 262 HM + P + +D Sbjct: 216 YRCVHMSHLV---------PPGMPHAGYD 235 >gi|281181183|dbj|BAI57513.1| phosphonate metabolism protein [Escherichia coli SE15] Length = 252 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 37/274 (13%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+ G G + GVP + AC P+ RR S + ++ ++D G Sbjct: 5 LTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--L 57 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + R S L TH H DH+ G+ LR I VY PD + Sbjct: 58 HDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDD 109 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 110 LFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSR 158 Query: 181 VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNA 235 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 159 VAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRV 218 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 ILTH+ D ++ + PS FDGM+ Sbjct: 219 ILTHISHQFDAWLMENALPSGFEAGFDGMEIEVE 252 >gi|253686889|ref|YP_003016079.1| phosphonate metabolism protein PhnP [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753467|gb|ACT11543.1| phosphonate metabolism protein PhnP [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 265 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 103/274 (37%), Gaps = 40/274 (14%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVD 59 D F LG G++ VP + C + + RR I+ + +++D Sbjct: 9 SDQIVFHFLGTGSAQQVPAFGCECEVCQQAQQDERKRRRACCAAITTQ-----DRVILID 63 Query: 60 TG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 G P+ +L +L TH H DH+ G+ LR + PI V+ PD Sbjct: 64 AGLPELAPYLLPYSRRH---ILLTHYHMDHVQGLFPLRWGY---GDPIPVFGPPDDA--- 114 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 FK + P + P I P+ H ++ + G+ Sbjct: 115 --GCDDLFKHPGILHFQPPLTPF----------QSFELDGISITPVPLIHSKL-TYGYLI 161 Query: 179 GN----VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIEL 229 +AY TD P E+ + L LD+ ++D + +H + +L+ Sbjct: 162 QTPTHTLAYLTDTIGLPPETAQFLSAHTLDYAVVDCSHPPQTTPPRNHNDVPRALEIFTQ 221 Query: 230 INPKNAILTHMHVDLDYDMVLKS-TPSRVVPAFD 262 +NPK LTH+ +LD + ++ P V A+D Sbjct: 222 LNPKQLYLTHIGHELDRWLQTQTLLPENVQAAYD 255 >gi|15804685|ref|NP_290726.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 EDL933] gi|15834329|ref|NP_313102.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. Sakai] gi|168748053|ref|ZP_02773075.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4113] gi|168755272|ref|ZP_02780279.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4401] gi|168760951|ref|ZP_02785958.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4501] gi|168766361|ref|ZP_02791368.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4486] gi|168774460|ref|ZP_02799467.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4196] gi|168780514|ref|ZP_02805521.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4076] gi|168784718|ref|ZP_02809725.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC869] gi|168798238|ref|ZP_02823245.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC508] gi|195935881|ref|ZP_03081263.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. EC4024] gi|208805871|ref|ZP_03248208.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4206] gi|208813876|ref|ZP_03255205.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4045] gi|208818622|ref|ZP_03258942.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4042] gi|209399538|ref|YP_002273637.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4115] gi|217324984|ref|ZP_03441068.1| phosphonate utilization protein [Escherichia coli O157:H7 str. TW14588] gi|254796115|ref|YP_003080952.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. TW14359] gi|261225214|ref|ZP_05939495.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255534|ref|ZP_05948067.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. FRIK966] gi|291285509|ref|YP_003502327.1| Phosphonate utilization protein [Escherichia coli O55:H7 str. CB9615] gi|12519057|gb|AAG59292.1|AE005642_11 phosphonate metabolism [Escherichia coli O157:H7 str. EDL933] gi|13364552|dbj|BAB38498.1| phosphonate metabolism [Escherichia coli O157:H7 str. Sakai] gi|187769830|gb|EDU33674.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4196] gi|188017434|gb|EDU55556.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4113] gi|189001753|gb|EDU70739.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4076] gi|189357423|gb|EDU75842.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4401] gi|189364200|gb|EDU82619.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4486] gi|189368593|gb|EDU87009.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4501] gi|189375060|gb|EDU93476.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC869] gi|189379056|gb|EDU97472.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC508] gi|208725672|gb|EDZ75273.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4206] gi|208735153|gb|EDZ83840.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4045] gi|208738745|gb|EDZ86427.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4042] gi|209160938|gb|ACI38371.1| phosphonate utilization protein [Escherichia coli O157:H7 str. EC4115] gi|209750958|gb|ACI73786.1| phosphonate metabolism [Escherichia coli] gi|209750960|gb|ACI73787.1| phosphonate metabolism [Escherichia coli] gi|209750962|gb|ACI73788.1| phosphonate metabolism [Escherichia coli] gi|209750966|gb|ACI73790.1| phosphonate metabolism [Escherichia coli] gi|217321205|gb|EEC29629.1| phosphonate utilization protein [Escherichia coli O157:H7 str. TW14588] gi|254595515|gb|ACT74876.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. TW14359] gi|290765382|gb|ADD59343.1| Phosphonate utilization protein [Escherichia coli O55:H7 str. CB9615] gi|320190776|gb|EFW65426.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Escherichia coli O157:H7 str. EC1212] gi|320638852|gb|EFX08498.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. G5101] gi|320644220|gb|EFX13285.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H- str. 493-89] gi|320649539|gb|EFX18063.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H- str. H 2687] gi|320660442|gb|EFX27903.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O55:H7 str. USDA 5905] gi|320665712|gb|EFX32749.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. LSU-61] gi|326341855|gb|EGD65638.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Escherichia coli O157:H7 str. 1125] gi|326346570|gb|EGD70304.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Escherichia coli O157:H7 str. 1044] Length = 252 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + AC P RR S + + ++D G Sbjct: 2 SLTLTLTGSGGAQGVPAWGCECAACARARRSPHYRRQPCSGVVKF-----NEAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 RHDLAD--RWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ D ++ + PS FDGM+ Sbjct: 216 PRVVLTHISHQFDAWLMENALPSGFEAGFDGMEI 249 >gi|297722391|ref|NP_001173559.1| Os03g0643250 [Oryza sativa Japonica Group] gi|255674737|dbj|BAH92287.1| Os03g0643250 [Oryza sativa Japonica Group] Length = 553 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 32/223 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRV 47 M+ LG G S +P C P N R +SL I Sbjct: 1 MESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSHSLSLPPERNPNYRCNTSLLIDYC 60 Query: 48 SERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----F 99 G + +++D G F QVLR ++ +D+++ TH HAD + G+D + Sbjct: 61 QHDGIHKYILIDVGKTFREQVLRWFSHHKIPYVDSIILTHEHADAVLGLDDVWVVQPSGC 120 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ M + F Y K D+ + ++ +IE D+ S+ Sbjct: 121 RNGLGKVPIFLTHFTMNSVAARFPYLLKNKLEEGDEGSQVIQLDWTIIEG-DIDKPFVSS 179 Query: 156 GGVIEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAES 194 G +E +P+ HG LGF FG +AY +DV+ + Sbjct: 180 G--LEFVPLPVMHGEDYVCLGFLFGRRSRIAYLSDVSRILPRT 220 >gi|261819912|ref|YP_003258018.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium wasabiae WPP163] gi|261603925|gb|ACX86411.1| phosphonate metabolism protein PhnP [Pectobacterium wasabiae WPP163] Length = 257 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 110/277 (39%), Gaps = 40/277 (14%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 D F LG G + VP + C + K RR I+ ++ +++D Sbjct: 6 DGIVFHFLGTGGAQQVPVFGCECEICQQAQRDEKKRRRACCAAITT-----KDSVILIDA 60 Query: 61 G-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 G P+ +L +L TH H DH+ G+ LR + PI V+ PD Sbjct: 61 GLPELSPYLLPYSRRH---ILLTHYHMDHVQGLFPLRWGY---GDPIPVFGPPDD----- 109 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 D +P I++ P+ + I P+ H ++ + G+ Sbjct: 110 ------VGCDDLFKHPGILHFQKPLMPFQPLELDG----IRITPVPLIHSKL-TYGYLIQ 158 Query: 180 N----VAYCTDVNAFPAESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELI 230 +AY TD P E+ + L +LD+ ++D + +H ++ +L+ + Sbjct: 159 TPTHTLAYLTDTIGLPPETAQFLSAHSLDYAVVDCSHPPQTTPPRNHNDVTRTLEIFTQL 218 Query: 231 NPKNAILTHMHVDLDYDMVLKS-TPSRVVPAFDGMQF 266 NPK LTH+ +LD + ++ P V A+DG + Sbjct: 219 NPKQLYLTHIGHELDRWLQTQTLLPEHVHAAYDGAEL 255 >gi|320654935|gb|EFX22896.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 252 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + AC P RR S + + ++D G Sbjct: 2 SLTLTLTGSGGAQGVPAWGCECAACARARRSPHYRRQPCSGVVKF-----NEAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 RHDLAD--RWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLTLNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ D ++ + PS FDGM+ Sbjct: 216 PRVVLTHISHQFDAWLMENALPSGFEAGFDGMEI 249 >gi|26250909|ref|NP_756949.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli CFT073] gi|26111341|gb|AAN83523.1|AE016771_34 PhnP protein [Escherichia coli CFT073] Length = 252 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 103/276 (37%), Gaps = 37/276 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + AC P+ RR S + ++ ++D G Sbjct: 2 SLPLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + R S L TH H DH+ G+ LR I VY PD + Sbjct: 57 --LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVCDT---IPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ILTH+ D ++ + PS FDGM+ Sbjct: 216 PRVILTHISHQFDAWLMENALPSGFEAGFDGMEIEV 251 >gi|209750964|gb|ACI73789.1| phosphonate metabolism [Escherichia coli] Length = 252 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 100/274 (36%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + GVP + AC P RR + + ++D G Sbjct: 2 SLTLTLTGSGGAQGVPAWGCECAACARARRSPHYRRQPCGGVVKF-----NEAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R S L TH H DH+ G+ LR PI VY PD + Sbjct: 57 RHDLAD--RWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ D ++ + PS FDGM+ Sbjct: 216 PRVVLTHISHQFDAWLMENALPSGFEAGFDGMEI 249 >gi|126667722|ref|ZP_01738690.1| carbon-phosphorus lyase complex accessory protein [Marinobacter sp. ELB17] gi|126627825|gb|EAZ98454.1| carbon-phosphorus lyase complex accessory protein [Marinobacter sp. ELB17] Length = 254 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 102/273 (37%), Gaps = 42/273 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP AC TN R S I +++D G Sbjct: 1 MRITFLGTGAAGGVPLYGCCCAACSVAKTNAALAREPCSALIE-----SGTIRILIDGGL 55 Query: 63 -DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + R +DA++ TH H DH+ G+ LR + I V+ PD + Sbjct: 56 MDLHK---RFAPGDLDAIVLTHFHPDHVQGLFHLR---WGKGPSIPVFIPPD-PDGCADL 108 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FR+ P +++ N G ++ P+ H + + G+ F Sbjct: 109 FRH---------------PGILDFNPQKAFSAFEIGGLKVTPVPLLHSK-PTFGYVFEVT 152 Query: 180 ---NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKNGL--HSSHFSLSESLKKIELINP 232 AY TD P ++ LQ D L ID H + +L I+ ++P Sbjct: 153 GGPTFAYLTDTRGLPDDTQHFLQTIKPDGLAIDCTFPPSGQPKGHNDWTLALDCIQAVDP 212 Query: 233 KNAILTHMHVDLDYDM--VLKSTPSRVVPAFDG 263 A L H+ +LD + P+R+ A DG Sbjct: 213 ARAWLIHISHELDNWRQSTNPALPNRISVARDG 245 >gi|120536851|ref|YP_956909.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120326685|gb|ABM20994.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 251 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 104/275 (37%), Gaps = 43/275 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T G + GVPR + AC P+ RR S + + +++D G Sbjct: 1 MQITFTGTAGAGGVPRYGCECAACVRARQQPEYRRRPCSALVET-----NQVRLLLDAGL 55 Query: 63 -DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + Q S++A++ TH HADH+ G+ LR + + V+ PD Sbjct: 56 MDIHDQ---FPAGSLNAIVLTHFHADHVQGLFHLR---WGKGARLPVFCPPD-------- 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 D N +++ + G ++ P+ H +I + G+ N Sbjct: 102 --------PDGCADLYKNSGILDFRHLESFKPFEIGDLKITPLPLNHSKI-TYGYAIENQ 152 Query: 181 ----VAYCTDVNAFPAESLEKLQ--NLDFLIIDAL---KNGLHSSHFSLSESLKKIELIN 231 AY TD P S+ L+ + +D + ++H + +L I ++ Sbjct: 153 SGQRFAYLTDTVGLPENSMHFLKSWGPFSMALDCSYPPQVHSPTNHNDYNLALNIINNVS 212 Query: 232 PKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGM 264 P+ LTH+ +LD + S + A DG+ Sbjct: 213 PQKGWLTHLSHELDLWRIENNCKLESNLAWAADGL 247 >gi|251790272|ref|YP_003004993.1| phosphonate metabolism protein PhnP [Dickeya zeae Ech1591] gi|247538893|gb|ACT07514.1| phosphonate metabolism protein PhnP [Dickeya zeae Ech1591] Length = 249 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 102/271 (37%), Gaps = 37/271 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT--RSSLKISRVSERGSNTTVIVDTGP 62 +G G + VP D AC+ +R SSL + E ++D G Sbjct: 1 MKLMFMGTGDAQQVPLTGCDCIACERARRDSRFRRGPSSLLVQCGGE-----VTLLDAGV 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R I +L TH H DH+ G+ LR I V+ PD + Sbjct: 56 TQLEQ--RFGANEIRRILLTHYHVDHVQGLFSLR---WGIGDRIPVFGPPD-----EQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 +K + P + P G ++ + H R + G+ Sbjct: 106 DDLYKHPRRLDFQPAMTPF----------QTMTMGAMQVTALPLTHSR-PTFGYLLEQGN 154 Query: 181 --VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 VAY TD P ++L+ L+ LD +++D ++ +H L+ L+ EL+ P Sbjct: 155 HAVAYLTDTCGLPDDTLDFLRGKRLDHMVMDCTQPPRDTPPLNHSDLNTVLRIRELLRPT 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 LTH+ + D ++ + P V A DGM Sbjct: 215 QTWLTHLSHETDAWLMQNTLPDGVQAAADGM 245 >gi|218187252|gb|EEC69679.1| hypothetical protein OsI_39117 [Oryza sativa Indica Group] Length = 334 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 98/288 (34%), Gaps = 79/288 (27%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S VP C P N R +SL I + ++ Sbjct: 32 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQFLSVLPELNPNYRCNTSLLIDYCQDENAH 91 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRP 105 +++D G F QVLR ++ +D+++ TH HAD + G+D +R P Sbjct: 92 KYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHADAVLGLDDVRIVQSFSPTNDIEP 151 Query: 106 IDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + + F Y + ++ ++ VIE +D+ I ++G Sbjct: 152 TPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVAQLDWRVIE-SDLQIPFVTSGLEFVP 210 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 +P G H+ H Sbjct: 211 LP-----------------------------------------------TGSHNVHLCWD 223 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVP-AFDG 263 ++L ++ I PK A+L M ++D+ ++ + ++DG Sbjct: 224 QTLDAVKRICPKRALLIGMTDEMDHHKDNETLEEWSRRSGIFLSSYDG 271 >gi|297613530|ref|NP_001067275.2| Os12g0615500 [Oryza sativa Japonica Group] gi|215712377|dbj|BAG94504.1| unnamed protein product [Oryza sativa Japonica Group] gi|255670483|dbj|BAF30294.2| Os12g0615500 [Oryza sativa Japonica Group] Length = 284 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 32/217 (14%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSN 53 LG G S VP C P N R +SL I + ++ Sbjct: 32 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVAPELNPNYRCNTSLLIDYCQDENAH 91 Query: 54 TTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRP 105 +++D G F QVLR ++ +D+++ TH HAD I G+D +R P Sbjct: 92 KYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHADAILGLDDVRIVQSFSPTNDIEP 151 Query: 106 IDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + M + + F Y + ++ ++ VIE +D+ I ++G +E Sbjct: 152 TPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVAQLDWRVIE-SDLQIPFVTSG--LEF 208 Query: 162 IPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAES 194 +P+ HG LGF FG VAY +DV+ FP + Sbjct: 209 VPLPVIHGEDYICLGFLFGRKSKVAYISDVSWFPPST 245 >gi|119947280|ref|YP_944960.1| carbon-phosphorus lyase complex accessory protein [Psychromonas ingrahamii 37] gi|119865884|gb|ABM05361.1| beta-lactamase domain protein [Psychromonas ingrahamii 37] Length = 255 Score = 162 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 100/277 (36%), Gaps = 35/277 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FT LG G+ G P + C+ NP RR + + + G+ +++D G Sbjct: 1 MKFTFLGTGSVKGAPVYGCECIVCNRALANPDLRRNPACGFLEIAGQLGT-VRLLIDAGY 59 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+DAVL TH H DH+ G+ +R I V++ D + Sbjct: 60 HHL--AERFPPGSLDAVLLTHFHMDHVQGLFPIR---WGVGETIPVFSPDD-----PKGC 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 FK + P + PI H ++ ++G+ Sbjct: 110 DDLFKYPGIFDFSQKTRPF----------QTFEFKDLLITPIPLVHSKL-TMGYVIELNG 158 Query: 180 -NVAYCTDVNAFPAESLEKL--QNLDFLIIDALKN---GLHSSHFSLSESLKKIELINPK 233 AY D + + L Q +D +I+D + +H L+ +L+ + PK Sbjct: 159 KRFAYLCDSGLLRRDVKQYLIDQPIDLMILDCEQPPLETAPRNHNDLTRALEIFAEVQPK 218 Query: 234 NAILTHMHVDLDYDMVLKS--TPSRVVPAFDGMQFSS 268 +LTH+ +LD + P V +D + Sbjct: 219 KLVLTHISHNLDEYFINHPNCLPENVAIGYDNQAWEL 255 >gi|302342366|ref|YP_003806895.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Desulfarculus baarsii DSM 2075] gi|301638979|gb|ADK84301.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Desulfarculus baarsii DSM 2075] Length = 310 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 87/257 (33%), Gaps = 34/257 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP-KNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G + G+P C R R+ L +S + V++D GPD Sbjct: 1 MELCFLGTGGAWGLPEHACPCATCRRMRALGQHRGRAGLWLSTAA-----GGVLIDPGPD 55 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKHLF 119 Q++ + DAVL +H H DH G+D L + Q RPI YA+ + Sbjct: 56 LRAQLMANDLPRPDAVLISHEHGDHFLGLDDLLCFRRAVAKDQWRPIPTYASEATWAAVE 115 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS--SLGFR 177 + F Y P + + + G + PI HG +LGF Sbjct: 116 QRFGYLL---------PSLLEKRLCRPGQALEGAPMGPELACTPIKVDHGPFPKGALGFV 166 Query: 178 FG--------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH----SSHFSLSESLK 225 F + Y D+ P + + LD L+ ++H SL +L Sbjct: 167 FDLRQDGRSLRLGYTGDMLR-PQDDPDAFAGLDVLVCQCAFLNEPAVNLANHLSLQAALP 225 Query: 226 KIELINPKNAILTHMHV 242 + P H Sbjct: 226 MLRRWTPGRVYFVHFTC 242 >gi|90580441|ref|ZP_01236247.1| Beta-lactamase-like protein [Vibrio angustum S14] gi|90438350|gb|EAS63535.1| Beta-lactamase-like protein [Vibrio angustum S14] Length = 255 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 35/271 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG- 61 T+LG GA+ GVP AC+ + R S I + + +++D G Sbjct: 2 LSLTLLGTGAAGGVPLYGCHCSACEAATHDHNLERKPCSAMIEW-GDEQNKKRLLIDAGI 60 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + R V S L TH H DH+ G+ LR I V+ D Sbjct: 61 MDLHK---RFSVGSYIGFLLTHFHVDHVQGLFHLR---WGNGALIPVWCPND-------- 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 D + ++ ++ VP ++ ++ P+ QH + + G+ F Sbjct: 107 ---PLGCADLLKHSGCLDFRSYLHHGVPFNVEG----LKITPLSMQHSK-PTFGYLFEFD 158 Query: 179 -GNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHS--SHFSLSESLKKIELINP 232 VAY TD + P E+ + L LD L++D +H + + E + P Sbjct: 159 GNTVAYLTDTDGLPLETEQYLLLVNKLDALVLDCSFPPALERGNHSDIDTAFDVYERLLP 218 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 K I+TH+ +LD + PS +V DG Sbjct: 219 KQFIITHIGHELDCWLQDNQVPSSLVIGCDG 249 >gi|121605419|ref|YP_982748.1| carbon-phosphorus lyase complex accessory protein [Polaromonas naphthalenivorans CJ2] gi|120594388|gb|ABM37827.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 258 Score = 161 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 39/271 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP AC+ + P R S I NT +++D G Sbjct: 1 MRVTFLGTGAAGGVPLFGCRCVACERAHLAPAFVRRPCSALIE-----SGNTRILLDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + R +DA++ TH H DH+ G+ LR + VY PD + + + Sbjct: 56 TDLHE--RFAPGDLDAIVLTHFHPDHVQGLFHLR---WGVGARLAVYGPPD-SEGCADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 ++ P V+E + + + G + P+ H ++ + G+ Sbjct: 110 KH---------------PGVLEFHALTKFEPLSIGALTLTPVPLIHSKV-TFGYAVAAST 153 Query: 179 -GNVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGLH--SSHFSLSESLKKIELINPK 233 AY TD P + L + L +D +H + +L I+ +NP+ Sbjct: 154 GSRFAYLTDTLGLPPRTETFLTDWHPHGLALDCSFPPQSEAKNHNDWTTALAVIDKVNPE 213 Query: 234 NAILTHMHVDLDYDM-VLKSTPSRVVPAFDG 263 A LTH+ LD + + SR A DG Sbjct: 214 RAWLTHISHTLDAWLFGTGESSSRAAIAMDG 244 >gi|115454299|ref|NP_001050750.1| Os03g0642900 [Oryza sativa Japonica Group] gi|53749408|gb|AAU90266.1| hypothetical protein [Oryza sativa Japonica Group] gi|108710049|gb|ABF97844.1| phosphonate metabolism protein, putative [Oryza sativa Japonica Group] gi|113549221|dbj|BAF12664.1| Os03g0642900 [Oryza sativa Japonica Group] Length = 240 Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 30/215 (13%) Query: 8 TILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVSERGSNT 54 LG G S +P C P N R +SL I + G++ Sbjct: 20 IFLGTGCSGALPDTRCLLRPSAPPCAVCSLGVSLPPEQNPNYRCNTSLLIDYCQDDGTHE 79 Query: 55 TVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPI 106 +I+D G F QVLR ++ +++++ TH HAD + G+D + R + Sbjct: 80 YIIIDVGKTFREQVLRWFVHHKIPWVNSIILTHEHADAVLGLDDVWMVQPKGCSNDFRRV 139 Query: 107 DVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ M + F Y K D+ + ++ +IE D+ S+G + Sbjct: 140 PIFLTQFTMDSVVARFPYLLKNKLEEGDEVSQVAQLDWRIIEG-DIDKPFVSSGLEFVPL 198 Query: 163 PILQQHGRISSLGFRFGN---VAYCTDVNAFPAES 194 P++ G I LGF FG +AY +DV+ F E+ Sbjct: 199 PVMHGEGNI-CLGFLFGRKAKIAYLSDVSRFLPET 232 >gi|215489443|ref|YP_002331874.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O127:H6 str. E2348/69] gi|312965711|ref|ZP_07779940.1| phosphonate metabolism protein PhnP [Escherichia coli 2362-75] gi|215267515|emb|CAS11969.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O127:H6 str. E2348/69] gi|312289685|gb|EFR17576.1| phosphonate metabolism protein PhnP [Escherichia coli 2362-75] Length = 252 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 103/274 (37%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G + GVP + AC +P+ RR S + + ++D G Sbjct: 2 SLTLTLTGTSGAQGVPAWGCECVACVRALRSPQYRRQPCSGVVKF-----NGAITLIDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + R S L TH H DH+ G+ LR I VY PD + Sbjct: 57 --LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + + P V+ G ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L+N ++ID + +H L+ L ++I Sbjct: 156 HSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRS 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH++ D ++ + PS FDGM+ Sbjct: 216 PRVILTHINHQFDAWLMENALPSGFEAGFDGMEI 249 >gi|82540827|ref|XP_724702.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479436|gb|EAA16267.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 425 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 78/322 (24%), Positives = 116/322 (36%), Gaps = 86/322 (26%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL------SIDA 78 N KN+R S+ + + +N+ V++D G F +L +++A Sbjct: 108 CYDALAENSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILFNNDKINFSEINLEA 162 Query: 79 VLYTHPHADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYC- 125 VL TH H D ++GID LR Y+ + K+PIDVY L F Y Sbjct: 163 VLITHSHTDAMNGIDDLRDLQEYERVSYEDIYYYRCKKPIDVYLNGVSYDRLRNGFEYIA 222 Query: 126 ----------------FKALDDRTYPPIVNPIVI-------------------------- 143 F L D Y +VN Sbjct: 223 KERTENRFYSKVAALNFYILKDIKYNSLVNENSENSENKENSENKNVSENNKCINIHSYD 282 Query: 144 --ENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEK 197 + + I IP QHG+ +G+ GN + Y +D N +E Sbjct: 283 KKDEHGFTYTTFENDKKIRFIPF--QHGKNYVCVGYIVGNNHKLVYISDCNYVSNSVIEY 340 Query: 198 LQN---LDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY------- 246 ++ +D L+IDAL H SHFS+ ES++ LI PK M D+++ Sbjct: 341 IKKFSPIDILVIDALYYKSKHYSHFSMYESIQFALLIKPKQVYFVGMSCDVEHNITNLYL 400 Query: 247 DMVLKSTPS-RVVPAFDGMQFS 267 +LK P A DG+ S Sbjct: 401 QKLLKKYPDISFSLAHDGLFVS 422 >gi|154150028|ref|YP_001403646.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998580|gb|ABS55003.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 240 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 49/273 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +LG G ++G P+I D C R R+SL I + ++VDT PD Q Sbjct: 5 LLGTGDAIGTPKIGCDCPQCQHAQKTGIGRLRTSLLIEQ-----DGRHILVDTSPDLRQQ 59 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++R IDAV++TH H DH G F + ++ VYA +++ +FR+ Sbjct: 60 LIRSGSPHIDAVVWTHGHYDHFMGFGE----FYRVQKCPPVYAPEPVLRYCGGTFRFL-- 113 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAY 183 E N V + I P L +H + GF F V Y Sbjct: 114 --------------EFEQNPVEPYVPFELFGITITPFLVKHPPAYTCGFVFERGGVRVGY 159 Query: 184 CTDVN-AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS------ESLKKIELINPKNAI 236 +D N P +SL L+NLD L + L SH +++ ++ E ++PK Sbjct: 160 TSDTNRDIPQKSLNLLENLDL----LLVDALVPSHMTITKHMNYLDACTLAESLHPKAFR 215 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 H+ + ++ P A DG F P Sbjct: 216 CIHISHMMPWE-----YP---HLAHDGDIFEFP 240 >gi|120555210|ref|YP_959561.1| carbon-phosphorus lyase complex accessory protein [Marinobacter aquaeolei VT8] gi|120325059|gb|ABM19374.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 251 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 101/275 (36%), Gaps = 43/275 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T G + GVPR + AC P+ +R S I +++D G Sbjct: 1 MQITFTGTAGAGGVPRYGCECAACVRARQQPEYQRRPCSALIET-----DKVRLLLDAGL 55 Query: 63 -DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + R ++A++ TH HADH+ G+ LR + + V+ PD Sbjct: 56 MDIHD---RFPAGRLNAIVLTHFHADHVQGLFHLR---WGKGAQLPVFCPPD-------- 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 D N +++ + G ++ P+ H +I + G+ Sbjct: 102 --------PDGCADLYKNSGILDFQHLEAFRPFEIGDLKITPLPLNHSKI-TYGYAIETA 152 Query: 180 ---NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKN---GLHSSHFSLSESLKKIELIN 231 AY TD P S+ L+ + +D ++H + +L I+ + Sbjct: 153 SGHRFAYLTDTVGLPENSMHFLKSWGPFSMALDCSYPPKVHSPANHNDYNLALDIIDNVR 212 Query: 232 PKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGM 264 P+ + LTH+ +LD + S + A DG+ Sbjct: 213 PQKSWLTHLSHELDLWRIKNNCKLESNLAWAADGL 247 >gi|242238759|ref|YP_002986940.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech703] gi|242130816|gb|ACS85118.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech703] Length = 249 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 98/270 (36%), Gaps = 37/270 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT--RSSLKISRVSERGSNTTVIVDTGP 62 +G G + VP D AC+ R SS+ + E ++D G Sbjct: 1 MELMFMGTGDAQQVPLTGCDCIACERARRDPRFRRGPSSMLVRCDDE-----ATLLDAGV 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q R V I +L TH H DH+ G+ LR I V+ PD + Sbjct: 56 TQLEQ--RFGVNEIRRILLTHYHVDHVQGLFSLR---WGIGDRIPVFGPPD-----EQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 +K + P + P A G + + H R + G+ Sbjct: 106 DDLYKHPRRLDFQPPMTPF----------QPVAMGALRVTALPLNHSR-PTFGYLLECNG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPK 233 +VAY TD P + + L LD +++D ++ +H L+ L+ + + P Sbjct: 155 QSVAYLTDTGDLPDATRDFLHGRRLDHMVMDCTQPPRDQPPLNHSDLNTVLRVRDQLRPT 214 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 LTH+ D D ++L P V A DG Sbjct: 215 QTWLTHISHDTDAWLMLNDLPDGVRAAADG 244 >gi|58264754|ref|XP_569533.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57225765|gb|AAW42226.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 480 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 111/316 (35%), Gaps = 99/316 (31%) Query: 25 WGACDPT-NP------KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQV 73 C T +P KN+R +S+ + + S G V+VD G F Q +R V Sbjct: 81 CACCRSTVDPDVPEGWKNKRGNTSVLLRKQSAEGDWKNVLVDVGKTFREQAMRFFPTWGV 140 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +IDAVL TH HAD G+D LR + ++Q + I VY + + E+F Y Sbjct: 141 KTIDAVLLTHGHADAYFGLDDLREWCVRQGKAIPVYLNKETFHKVEETFPYMVDKTKVSG 200 Query: 134 Y--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---------------------- 169 P + +IE+ + G ++ +P+ HG Sbjct: 201 GGDVPQLIWKIIEDEGE---FQVEGIDVKVLPV--HHGIYFHSILPPTNAEPVREPPAKI 255 Query: 170 ---RISSLGFRFGN-VAYCTDVNAFPAES------------------------------- 194 + L F F + + Y +DV+ P + Sbjct: 256 EPEPLICLAFEFDDSIIYMSDVSGIPQRTWDRMLQTSSRRQTIFPTPVDSRGGDDTPKGV 315 Query: 195 ---------------------LEKLQ--NLDFLIIDALKN-GLHSSHFSLSESLKKIELI 230 LE+L+ N+ LIIDAL H+SHFSL+++L + Sbjct: 316 PKNQSISDLANLSISPRVPGRLEQLRTHNVPVLIIDALWPLQPHASHFSLAQALIAALRL 375 Query: 231 NPKNAILTHMHVDLDY 246 N + + Sbjct: 376 RAANTYVIGSTHPTSH 391 >gi|311281363|ref|YP_003943594.1| phosphonate metabolism protein PhnP [Enterobacter cloacae SCF1] gi|308750558|gb|ADO50310.1| phosphonate metabolism protein PhnP [Enterobacter cloacae SCF1] Length = 252 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 98/278 (35%), Gaps = 41/278 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIV 58 M T G G + VP D AC + RR S +I + ++ Sbjct: 1 MSLTIRLT--GTGGAQLVPVFGCDCAACRRARSQAQFRRRPCSAEIRY-----NEAVTLL 53 Query: 59 DTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D G PD + R S L TH H DH+ G+ LR I VY PD Sbjct: 54 DAGLPDL---MERWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGERIAVYGPPD---- 103 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + F+ + V P V+ ++ P+ H ++ + G+ Sbjct: 104 -EQGCDDLFRHPGLLDFSHTVEPFVV----------FELQGLQVTPLPLNHSKL-TFGYL 151 Query: 178 FG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 VA+ +D P ++L+ L N +IID + +H L+ + E Sbjct: 152 LESAHSRVAWLSDTAGLPDKTLKFLLNNHPQAIIIDCSHPPRAETPKNHCDLNTVIAINE 211 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 I ILTH+ D M+ P +DGM+ Sbjct: 212 TIRSPRVILTHISHQFDVWMMDNPLPPGFEAGYDGMEI 249 >gi|134109883|ref|XP_776491.1| hypothetical protein CNBC5450 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259167|gb|EAL21844.1| hypothetical protein CNBC5450 [Cryptococcus neoformans var. neoformans B-3501A] Length = 480 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 111/316 (35%), Gaps = 99/316 (31%) Query: 25 WGACDPT-NP------KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQV 73 C T +P KN+R +S+ + + S G V+VD G F Q +R V Sbjct: 81 CACCRSTVDPDVPEGWKNKRGNTSVLLRKQSAEGDWKNVLVDVGKTFREQAMRFFPTWGV 140 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +IDAVL TH HAD G+D LR + ++Q + I VY + + E+F Y Sbjct: 141 KTIDAVLLTHGHADAYFGLDDLREWCVRQGKAIPVYLNKETFHKVEETFPYMVDKTKVSG 200 Query: 134 Y--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---------------------- 169 P + +IE+ + G ++ +P+ HG Sbjct: 201 GGDVPQLIWKIIEDEGE---FQVEGIDVKVLPV--HHGIYFHSILPPTNAEPVREPPAKI 255 Query: 170 ---RISSLGFRFGN-VAYCTDVNAFPAES------------------------------- 194 + L F F + + Y +DV+ P + Sbjct: 256 EPEPLICLAFEFDDSIIYMSDVSGIPQRTWDRMLQTSSRRQTIFPTPVDSRGGDDTPKGV 315 Query: 195 ---------------------LEKLQ--NLDFLIIDALKN-GLHSSHFSLSESLKKIELI 230 LE+L+ N+ LIIDAL H+SHFSL+++L + Sbjct: 316 PKNQSISDLANLSISPRVPGRLEQLRTHNVPVLIIDALWPLQPHASHFSLAQALIAALRL 375 Query: 231 NPKNAILTHMHVDLDY 246 N + + Sbjct: 376 RAANTYVIGSTHPTSH 391 >gi|261341450|ref|ZP_05969308.1| phosphonate metabolism protein PhnP [Enterobacter cancerogenus ATCC 35316] gi|288316242|gb|EFC55180.1| phosphonate metabolism protein PhnP [Enterobacter cancerogenus ATCC 35316] Length = 252 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 94/276 (34%), Gaps = 37/276 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + VP D AC +RR S + ++ ++D G Sbjct: 2 SLTITLTGTGGAQLVPVFGCDCPACRRARLQENHRRRPCSAAVKF-----NDAVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S L TH H DH+ G+ LR I VY PD Sbjct: 57 --IPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGAAIPVYGPPD-----KAG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ + P+ H ++ + G+ Sbjct: 107 CDDLFKHPGILDFSHRVEPFVV----------FELQGLRVTPLPLNHSKL-TFGYLLESA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++++ L N +IID + +H L+ + ++I Sbjct: 156 HSRVAWLSDTAGLPEKTVKFLLNNRPQAMIIDCSHEPRAETPRNHCDLNTVIALNKVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ILTH+ D M+ P +DGM + Sbjct: 216 PQVILTHISHQFDVWMMDNPLPEGFEAGYDGMVLAL 251 >gi|271501117|ref|YP_003334142.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech586] gi|270344672|gb|ACZ77437.1| phosphonate metabolism protein PhnP [Dickeya dadantii Ech586] Length = 244 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 37/265 (13%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRT--RSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 +G G + VP + AC+ R SSL I E ++D G Q Sbjct: 1 MGTGDAQQVPLTGCECIACERARRDPRFRRGPSSLMIRCDGE-----VTLLDAGVTQLEQ 55 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 R V I +L TH H DH+ G+ LR I V+ PD + +K Sbjct: 56 --RFGVNEIRRILLTHYHVDHVQGLFSLR---WGIGDRIPVFGPPD-----EQGCDDLYK 105 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAY 183 + P + P A G + + H + + G+ VAY Sbjct: 106 HPRRLDFQPAMTPF----------QTVAMGALRVTALPLNHSK-PTFGYLLETGRHAVAY 154 Query: 184 CTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILT 238 TD P ++L L+ L+ +++D ++ +H L+ L+ E + P++ LT Sbjct: 155 LTDTCGLPDDTLAFLRGKRLEHMVMDCTQPPRDTPPLNHSDLNTVLQVREWLRPEHTWLT 214 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDG 263 H+ + D ++ + P V A DG Sbjct: 215 HLSHETDAWLMQNTLPEGVQAAADG 239 >gi|296100718|ref|YP_003610864.1| carbon-phosphorus lyase complex accessory protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055177|gb|ADF59915.1| carbon-phosphorus lyase complex accessory protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 252 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G++ VP D AC RR S + ++ ++D G Sbjct: 2 SLTITLTGTGSAQLVPVFGCDCAACRRARLQENYRRRPCSAAVKF-----NDAVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S L TH H DH+ G+ LR I VY PD Sbjct: 57 --IPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGATIPVYGPPD-----EAG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + ++ P V+ + P+ H ++ + G+ Sbjct: 107 CDDLFKHPGILDFSHMLEPFVM----------FELQGLRVTPLPLNHSKL-TFGYLLESA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++++ L N +IID + +H L+ + E+I Sbjct: 156 HSRVAWLSDTAGLPEKTVKFLLNNQPQAMIIDCSHEPRPQTPRNHCDLNTVVALNEVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D M+ P + +DGM Sbjct: 216 PQVILTHISHQFDVWMMDNPLPDGIEAGYDGMVL 249 >gi|218661422|ref|ZP_03517352.1| hypothetical protein RetlI_18770 [Rhizobium etli IE4771] Length = 112 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 79/110 (71%) Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 P +QQHG I SLGFR G+VAYC+D++ FP +++EKLQ+LD LIIDAL+ H SH SL Sbjct: 1 FYPHIQQHGDIHSLGFRIGDVAYCSDISDFPPQTVEKLQDLDVLIIDALQYTYHPSHLSL 60 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 +SL I + PK AILTHMH LDYD+V+ TP VVPA+D M F + + Sbjct: 61 EQSLDWIGRLKPKRAILTHMHTPLDYDVVMAETPDHVVPAYDQMSFETEV 110 >gi|82546428|ref|YP_410375.1| carbon-phosphorus lyase complex accessory protein [Shigella boydii Sb227] gi|81247839|gb|ABB68547.1| phosphonate metabolism [Shigella boydii Sb227] gi|320183127|gb|EFW57987.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Shigella flexneri CDC 796-83] gi|332087853|gb|EGI92979.1| phosphonate metabolism protein PhnP [Shigella boydii 3594-74] Length = 252 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 100/263 (38%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECVACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWP 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + SH L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|323190025|gb|EFZ75303.1| phosphonate metabolism protein PhnP [Escherichia coli RN587/1] Length = 252 Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 37/265 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G + R Sbjct: 13 AQGVPAWGCECVACARARRSPQYRRQPCSGVVKF-----NEAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGNQIPVYGPPD-----EQGCEDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIEV 251 >gi|40787179|gb|AAR90100.1| HtxN [Pseudomonas stutzeri] Length = 255 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 68/276 (24%), Positives = 105/276 (38%), Gaps = 48/276 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG GA+ GVP AC+ P R S I T V++D G Sbjct: 1 MRVSFLGTGAAGGVPLYGCTCRACERARTEPHFVRRPCSALIE-----SGGTRVLLDAGL 55 Query: 63 -DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 D + R S+DA++ TH H DH+ G+ LR + PI VY PD + + Sbjct: 56 MDLHE---RFAPGSLDAIVLTHYHPDHVQGLFHLR---WGKGTPITVYGPPD-SEGCADL 108 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 F++ P ++ + + G + P+ H + +LG+ Sbjct: 109 FKH----------PGVLAFETVHKFEA-----FTVGALRLTPLPLLHSK-PTLGYAIEGT 152 Query: 180 ---NVAYCTDVNAFPAESLEKLQ---NLDFLIIDALKNGLHSS---HFSLSESLKKIELI 230 AY TD P +S + L+ + D I D H + H E+ + Sbjct: 153 QGQRFAYLTDTLGLPPKSAKFLRAWGDFDMAI-DCS-YPPHPTPKNHNDWDEAHRCAIES 210 Query: 231 NPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 + LTH LD D +++ TP S + A DG Sbjct: 211 GARITWLTHAGHALD-DWMMEETPSVASHIRLARDG 245 >gi|218692389|ref|YP_002400601.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli ED1a] gi|306815773|ref|ZP_07449922.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli NC101] gi|218429953|emb|CAR10786.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli ED1a] gi|222035821|emb|CAP78566.1| Protein phnP [Escherichia coli LF82] gi|305851435|gb|EFM51890.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli NC101] gi|312948687|gb|ADR29514.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O83:H1 str. NRG 857C] gi|324008670|gb|EGB77889.1| phosphonate metabolism protein PhnP [Escherichia coli MS 57-2] Length = 252 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIEVE 252 >gi|238760222|ref|ZP_04621367.1| Beta-lactamase domain protein [Yersinia aldovae ATCC 35236] gi|238701545|gb|EEP94117.1| Beta-lactamase domain protein [Yersinia aldovae ATCC 35236] Length = 241 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 64/267 (23%), Positives = 94/267 (35%), Gaps = 44/267 (16%) Query: 19 PRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 P C P RR S + E T ++D G Q+ I Sbjct: 2 PVFGCQCVVCAKARLQPALRRQPCSAMLRYQGE-----TTLIDAGLPALDQLFAGG--EI 54 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY-P 135 L TH H DH+ G+ LR I VY PD + +K + P Sbjct: 55 QRFLLTHYHMDHVQGLFPLRWGC---GNAIPVYGPPD-----PDGCDDLYKHPGILAFQP 106 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP 191 P+ I+ G + P+ H +I + G+ + +AY TD P Sbjct: 107 PLSAFHPIQ-----------FGDLRVTPVPLNHSKI-TFGYLLQSPNRTIAYLTDTIGLP 154 Query: 192 AESLEKL--QNLDFLIIDALKNGLH--------SSHFSLSESLKKIELINPKNAILTHMH 241 A+S L +N+D LI D H +H ++ +L EL+ P +LTH+ Sbjct: 155 ADSALFLASKNIDLLIQDCSHPPHHLAPHRSPPRNHNDVTMALAISELLKPAATLLTHIS 214 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LD + + P V A D S Sbjct: 215 HQLDTWALDNTLPDGVTIAQDNQVISL 241 >gi|74314579|ref|YP_312998.1| carbon-phosphorus lyase complex accessory protein [Shigella sonnei Ss046] gi|73858056|gb|AAZ90763.1| phosphonate metabolism [Shigella sonnei Ss046] gi|323164501|gb|EFZ50302.1| phosphonate metabolism protein PhnP [Shigella sonnei 53G] Length = 252 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + ACD P+ RR S + + ++D G R Sbjct: 13 AQGVPAWGCECAACDRARRSPQYRRQPCSGVVKF-----NEAITLIDAGLHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI +Y PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPIYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N +++D + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|227886869|ref|ZP_04004674.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 83972] gi|300988449|ref|ZP_07178687.1| phosphonate metabolism protein PhnP [Escherichia coli MS 45-1] gi|301047689|ref|ZP_07194751.1| phosphonate metabolism protein PhnP [Escherichia coli MS 185-1] gi|227836211|gb|EEJ46677.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 83972] gi|300300435|gb|EFJ56820.1| phosphonate metabolism protein PhnP [Escherichia coli MS 185-1] gi|300407447|gb|EFJ90985.1| phosphonate metabolism protein PhnP [Escherichia coli MS 45-1] gi|307556263|gb|ADN49038.1| phosphonate metabolism protein PhnP [Escherichia coli ABU 83972] gi|315293992|gb|EFU53344.1| phosphonate metabolism protein PhnP [Escherichia coli MS 153-1] Length = 252 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 99/265 (37%), Gaps = 37/265 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIEV 251 >gi|331650121|ref|ZP_08351194.1| phosphonate metabolism protein PhnP [Escherichia coli M605] gi|331041066|gb|EGI13223.1| phosphonate metabolism protein PhnP [Escherichia coli M605] Length = 268 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G R Sbjct: 29 AQGVPAWGCECAACVRARRSPQYRRQPCSGAVKF-----NEAITLIDAGLHDLTD--RWS 81 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 82 PGSFRQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 133 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 134 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 182 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 183 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 242 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ + PS FDGM+ Sbjct: 243 FDAWLMENALPSGFEAGFDGMEIEVE 268 >gi|284924181|emb|CBG37281.1| carbon-phosphorus lyase complex accessory protein (metallo-beta-lactamase superfamily protein) [Escherichia coli 042] Length = 256 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 100/267 (37%), Gaps = 37/267 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACVRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSPI 270 D ++ + PS FDGM+ I Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIGVEI 253 >gi|224510880|pdb|3G1P|A Chain A, Crystals Structure Of Phnp From E.Coli K-12 gi|224510881|pdb|3G1P|B Chain B, Crystals Structure Of Phnp From E.Coli K-12 gi|316983314|pdb|3P2U|A Chain A, Crystal Structure Of Phnp In Complex With Orthovanadate gi|316983315|pdb|3P2U|B Chain B, Crystal Structure Of Phnp In Complex With Orthovanadate Length = 258 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N +++D + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|16131918|ref|NP_418516.1| carbon-phosphorus lyase complex accessory protein, phosphodiesterase [Escherichia coli str. K-12 substr. MG1655] gi|89110814|ref|AP_004594.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli str. K-12 substr. W3110] gi|170083546|ref|YP_001732866.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli str. K-12 substr. DH10B] gi|194437176|ref|ZP_03069274.1| phosphonate utilization protein [Escherichia coli 101-1] gi|238903202|ref|YP_002928998.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli BW2952] gi|253775278|ref|YP_003038109.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037103|ref|ZP_04871180.1| phnP [Escherichia sp. 1_1_43] gi|256024969|ref|ZP_05438834.1| carbon-phosphorus lyase complex accessory protein [Escherichia sp. 4_1_40B] gi|300932071|ref|ZP_07147365.1| phosphonate metabolism protein PhnP [Escherichia coli MS 187-1] gi|300946683|ref|ZP_07160940.1| phosphonate metabolism protein PhnP [Escherichia coli MS 116-1] gi|300957479|ref|ZP_07169691.1| phosphonate metabolism protein PhnP [Escherichia coli MS 175-1] gi|301019258|ref|ZP_07183452.1| phosphonate metabolism protein PhnP [Escherichia coli MS 196-1] gi|312974105|ref|ZP_07788276.1| phosphonate metabolism protein PhnP [Escherichia coli 1827-70] gi|130109|sp|P16692|PHNP_ECOLI RecName: Full=Protein phnP gi|147213|gb|AAA24356.1| phnP protein [Escherichia coli] gi|216605|dbj|BAA14276.1| phnP [Escherichia coli W3110] gi|536936|gb|AAA96991.1| phnP [Escherichia coli str. K-12 substr. MG1655] gi|1790530|gb|AAC77053.1| carbon-phosphorus lyase complex accessory protein, phosphodiesterase [Escherichia coli str. K-12 substr. MG1655] gi|85676845|dbj|BAE78095.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli str. K12 substr. W3110] gi|169891381|gb|ACB05088.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli str. K-12 substr. DH10B] gi|194423732|gb|EDX39721.1| phosphonate utilization protein [Escherichia coli 101-1] gi|226840209|gb|EEH72211.1| phnP [Escherichia sp. 1_1_43] gi|238860109|gb|ACR62107.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli BW2952] gi|242379619|emb|CAQ34441.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli BL21(DE3)] gi|253326322|gb|ACT30924.1| phosphonate metabolism protein PhnP [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253980084|gb|ACT45754.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli BL21(DE3)] gi|260451077|gb|ACX41499.1| phosphonate metabolism protein PhnP [Escherichia coli DH1] gi|299882307|gb|EFI90518.1| phosphonate metabolism protein PhnP [Escherichia coli MS 196-1] gi|300315789|gb|EFJ65573.1| phosphonate metabolism protein PhnP [Escherichia coli MS 175-1] gi|300453662|gb|EFK17282.1| phosphonate metabolism protein PhnP [Escherichia coli MS 116-1] gi|300460162|gb|EFK23655.1| phosphonate metabolism protein PhnP [Escherichia coli MS 187-1] gi|309704561|emb|CBJ03910.1| conserved hypothetical protein [Escherichia coli ETEC H10407] gi|310331639|gb|EFP98895.1| phosphonate metabolism protein PhnP [Escherichia coli 1827-70] gi|315138648|dbj|BAJ45807.1| carbon-phosphorus lyase complex accessoryprotein [Escherichia coli DH1] gi|315617471|gb|EFU98077.1| phosphonate metabolism protein PhnP [Escherichia coli 3431] gi|323380519|gb|ADX52787.1| phosphonate metabolism protein PhnP [Escherichia coli KO11] gi|323940278|gb|EGB36471.1| phosphonate metabolism protein PhnP [Escherichia coli E482] gi|323960406|gb|EGB56042.1| phosphonate metabolism protein PhnP [Escherichia coli H489] Length = 252 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 100/263 (38%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N +++D + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|295095454|emb|CBK84544.1| phosphonate metabolism protein PhnP [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 252 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 95/274 (34%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + VP D AC RR S + +++ ++D G Sbjct: 2 SLTITLTGTGGAQLVPVFGCDCAACRRARLQENYRRRPCSAAVKF-----NDSVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S +L TH H DH+ G+ LR I VY PD Sbjct: 57 --IPHLMDDWPAGSFRQILLTHYHMDHVQGLFPLR---WGVGATIPVYGPPDDA-----G 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 F+ + V P V+ + P+ H ++ + G+ Sbjct: 107 CDDLFRHPGLLDFSHTVEPFVM----------FELQGLRVTPLPLNHSKL-TFGYLLESA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P +++ L N +IID + +H L+ + E+I Sbjct: 156 HSRVAWLSDTAGLPDKTVTFLLNNQPQAMIIDCSHEPRPETPRNHCDLNTVIALNEVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D M+ PS + +DGM Sbjct: 216 PQVILTHISHQFDVWMMDNPLPSGIEAGYDGMML 249 >gi|320193471|gb|EFW68108.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Escherichia coli WV_060327] Length = 252 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP D AC P+ RR S + + ++D G + R Sbjct: 13 AQGVPAWGCDCVACARARRSPQYRRQPCSGVVKF-----NEAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|323965753|gb|EGB61205.1| phosphonate metabolism protein PhnP [Escherichia coli M863] gi|327250438|gb|EGE62151.1| phosphonate metabolism protein PhnP [Escherichia coli STEC_7v] Length = 252 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHNRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P +L+ L N ++ID + + +H L+ L E+I ILTH+ Sbjct: 167 GLPENTLKFLLNNHPQVMVIDCSHPPREDVPRNHCDLNTVLALNEIIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ + PS V FDGM+ Sbjct: 227 FDAWLMENTLPSGVEAGFDGMEIGVE 252 >gi|195941141|ref|ZP_03086523.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli O157:H7 str. EC4024] Length = 252 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 93/274 (33%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + VP D AC RR S + ++ ++D G Sbjct: 2 SLTITLTGTGGAQLVPVFGCDCAACRRARLQENYRRRPCSAAVKF-----NDAVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S L TH H DH+ G+ LR I VY PD Sbjct: 57 --IPHLMDDWPAGSFRQFLLTHYHMDHVQGLFPLR---WGVGATIPVYGPPDDA-----G 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ + P+ H ++ + G+ Sbjct: 107 CDDLFKHPGLLDFSHTVEPFVM----------FELQGLRVTPLPLNHSKL-TFGYLLESA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P +++ L N +IID + +H L+ + ++I Sbjct: 156 HSRVAWLSDTAGLPDKTVTFLLNNQPQAMIIDCSHEPRPETPRNHCDLNTVIALNKVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D M+ PS + +DGM Sbjct: 216 PQVILTHISHQFDVWMMENPLPSGIEAGYDGMVL 249 >gi|188493249|ref|ZP_03000519.1| phosphonate utilization protein [Escherichia coli 53638] gi|188488448|gb|EDU63551.1| phosphonate utilization protein [Escherichia coli 53638] Length = 252 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G + R Sbjct: 13 AQGVPAWGCECVACARARRSPQYRRQPCSGVVKF-----NEAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|331655921|ref|ZP_08356909.1| phosphonate metabolism protein PhnP [Escherichia coli M718] gi|331046275|gb|EGI18365.1| phosphonate metabolism protein PhnP [Escherichia coli M718] Length = 252 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NEAITLIDAGLHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDALKNG---LHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKLLRNNQPQVMVIDCSHPPCEDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENTLPSGFEAGFDGMEI 249 >gi|330908430|gb|EGH36949.1| metal-dependent hydrolases of the beta-lactamase superfamily 1; PhnP protein [Escherichia coli AA86] Length = 252 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 97/266 (36%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G R Sbjct: 13 AQGVPAWGCECAACVRARRSPQYRRQPCSGAVKF-----NEAITLIDAGLHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFRQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIEVE 252 >gi|218702758|ref|YP_002410387.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli IAI39] gi|218372744|emb|CAR20621.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli IAI39] Length = 252 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|238793037|ref|ZP_04636666.1| Beta-lactamase domain protein [Yersinia intermedia ATCC 29909] gi|238727637|gb|EEQ19162.1| Beta-lactamase domain protein [Yersinia intermedia ATCC 29909] Length = 237 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 92/261 (35%), Gaps = 37/261 (14%) Query: 19 PRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 P D C P R S + E T ++D G Q I Sbjct: 2 PVFGCDCVICAKARVQPALGRKPCSAMLRYQGE-----TTLIDAGLPTLDQQFTAG--EI 54 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 L TH H DH+ G+ LR I +Y PD + FK + P Sbjct: 55 QRFLLTHYHMDHVQGLFPLRWGC---GNSIPIYGPPD-----PDGCDDLFKHPGILHFQP 106 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA 192 + G + P+ H +I + G+ + +AY TD PA Sbjct: 107 ----------PMAAFQTLHFGNLRVTPVPLTHSKI-TFGYLLQSPNRTIAYLTDTVGLPA 155 Query: 193 ESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +S L +N+D L++D + +H ++ +L +L+ P+ +LTH LD Sbjct: 156 DSALFLTSKNIDLLVLDCSHPPQTPPPRNHNDVTIALAIKDLLMPQQTLLTHASHQLDRW 215 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 ++ P+ V A D + Sbjct: 216 LLDHPLPAGVAIAHDNQTITL 236 >gi|331665762|ref|ZP_08366656.1| phosphonate metabolism protein PhnP [Escherichia coli TA143] gi|331056813|gb|EGI28807.1| phosphonate metabolism protein PhnP [Escherichia coli TA143] Length = 252 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I +Y PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPIYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L E+I +LTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNEVIRSPRVVLTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ PS FDGM+ Sbjct: 227 FDAWLMENLLPSGFEAGFDGMEI 249 >gi|218707708|ref|YP_002415227.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli UMN026] gi|293402725|ref|ZP_06646822.1| phnP [Escherichia coli FVEC1412] gi|298378254|ref|ZP_06988138.1| phnP [Escherichia coli FVEC1302] gi|218434805|emb|CAR15739.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli UMN026] gi|291429640|gb|EFF02654.1| phnP [Escherichia coli FVEC1412] gi|298280588|gb|EFI22089.1| phnP [Escherichia coli FVEC1302] Length = 252 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPTWGCECVACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I +Y PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPIYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L E+I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNEVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|255638707|gb|ACU19658.1| unknown [Glycine max] Length = 232 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 80/217 (36%), Gaps = 36/217 (16%) Query: 7 FTILGCGASLGVPRITG-------DWGAC------DPTNPKNRRTRSSLKISRVSER--G 51 LG G S VP + C P N R +SL I + G Sbjct: 17 LIFLGSGCSSMVPNVMCLLQPSDPPCPVCVQSLSIPPERNPNYRCNTSLLIDYCGDANAG 76 Query: 52 SNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQK 103 +++D G F VLR ++ +D+++ TH HAD + G+D +R Sbjct: 77 DRKYILIDVGKTFRETVLRWFVAHRIPRVDSIILTHEHADAVLGLDDVRAVQAFSPTNDI 136 Query: 104 RPIDVYAAPDCMKHLFESFRYCF-----KALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 P +Y + M + E F Y + + R I I+ ++ + P Sbjct: 137 DPTPIYLSQHSMDSIAEKFPYLVQKKRKEGAEIRRVAQIDWNIIADDCNKPFLASG---- 192 Query: 159 IEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFP 191 ++ P+ HG LGF FG VAY +D P Sbjct: 193 LKFTPLPVMHGEDYICLGFLFGERNRVAYISDGLRVP 229 >gi|91775840|ref|YP_545596.1| putative hydrolase protein [Methylobacillus flagellatus KT] gi|91709827|gb|ABE49755.1| putative hydrolase protein [Methylobacillus flagellatus KT] Length = 150 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 7/154 (4%) Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M+H+ F Y + D PI++ P+ +E IP+ HGR+ Sbjct: 1 MEHIVSKFGYAIRDPGDYWDLPILSV-------SPVEQAFELFNVEIIPVPILHGRLEMY 53 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 G+R G +AY TD +A P SLE LQ LD L++D L+ H +HFSL +SL++ +I K Sbjct: 54 GYRLGRLAYLTDASAIPEASLELLQGLDVLLLDCLRYTPHYTHFSLEQSLEQAAIIGAKQ 113 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 L HM +++Y+ V K PS V +DG++ Sbjct: 114 TYLIHMTHEMEYEAVSKMLPSSVQVGYDGLKLEI 147 >gi|293407818|ref|ZP_06651658.1| phosphonate metabolism protein PhnP [Escherichia coli B354] gi|291472069|gb|EFF14551.1| phosphonate metabolism protein PhnP [Escherichia coli B354] Length = 252 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECVACVRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I +Y PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPIYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L E+I +LTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNEVIRSPRVVLTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ PS FDGM+ Sbjct: 227 FDAWLMENLLPSGFEAGFDGMEI 249 >gi|91213640|ref|YP_543626.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli UTI89] gi|117626380|ref|YP_859703.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli APEC O1] gi|218561182|ref|YP_002394095.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli S88] gi|91075214|gb|ABE10095.1| PhnP protein [Escherichia coli UTI89] gi|115515504|gb|ABJ03579.1| PhnP, carbon-phosphorus lyase complex accessory protein [Escherichia coli APEC O1] gi|218367951|emb|CAR05751.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli S88] gi|294493130|gb|ADE91886.1| phosphonate utilization protein [Escherichia coli IHE3034] gi|307629163|gb|ADN73467.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli UM146] gi|315287880|gb|EFU47282.1| phosphonate metabolism protein PhnP [Escherichia coli MS 110-3] gi|323950341|gb|EGB46222.1| phosphonate metabolism protein PhnP [Escherichia coli H252] gi|323954421|gb|EGB50205.1| phosphonate metabolism protein PhnP [Escherichia coli H263] Length = 252 Score = 152 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 37/265 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 D ++ + PS FDGM Sbjct: 227 FDAWLMENALPSGFEAGFDGMDIEV 251 >gi|323975365|gb|EGB70467.1| phosphonate metabolism protein PhnP [Escherichia coli TW10509] Length = 252 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVM--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++++ L+N ++ID + +H L+ L E+I +LTH+ Sbjct: 167 GLPEKTVKFLRNNQPQVMVIDCSHPPRANSPRNHCDLNTVLALNEVIRSPRVVLTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 LD ++ PS FDGM+ Sbjct: 227 LDVWLMENVLPSGFEAGFDGMEIGVE 252 >gi|323935502|gb|EGB31835.1| phosphonate metabolism protein PhnP [Escherichia coli E1520] Length = 252 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP ACD P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCGCAACDRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----DQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|238761791|ref|ZP_04622765.1| Beta-lactamase domain protein [Yersinia kristensenii ATCC 33638] gi|238699905|gb|EEP92648.1| Beta-lactamase domain protein [Yersinia kristensenii ATCC 33638] Length = 236 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 95/262 (36%), Gaps = 39/262 (14%) Query: 19 PRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 P + C P RR + E T ++D G Q I Sbjct: 2 PVFGCECVVCIKARVQPALRRQPCCAMLRYQGE-----TTLIDAGLPTLDQQFAAG--GI 54 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY-P 135 L TH H DH+ G+ LR I VY D + +K + P Sbjct: 55 QRFLLTHYHIDHVQGLFPLRWGCTN---AIPVYGPAD-----PDGCDDLYKHPGILAFQP 106 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP 191 P+ I+ G + P+ H +I + G+ + +AY TD P Sbjct: 107 PLRAFHPIQ-----------FGDLRVTPVPLNHSKI-TFGYLLQSPNRTIAYLTDTIGLP 154 Query: 192 AESLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 A+S L +N+D L+ D + +H ++ +L EL+ PK +LTH+ LD Sbjct: 155 ADSALFLASKNIDLLVQDCSHPPQEPAPRNHNDVTMALAISELLKPKTTLLTHVSHQLDA 214 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + P+ + A D + + Sbjct: 215 WALDNTLPAGITIAQDNQRINL 236 >gi|170681563|ref|YP_001746486.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli SMS-3-5] gi|170519281|gb|ACB17459.1| phosphonate utilization protein [Escherichia coli SMS-3-5] Length = 252 Score = 152 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH++ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHINHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|237728176|ref|ZP_04558657.1| carbon-phosphorus lyase complex accessory protein [Citrobacter sp. 30_2] gi|226910187|gb|EEH96105.1| carbon-phosphorus lyase complex accessory protein [Citrobacter sp. 30_2] Length = 252 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 98/274 (35%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T+ G G + VP D AC + + RR S + +N ++D G Sbjct: 2 SLTITLTGTGGAQLVPTFGCDCAACQRAHLQAQYRRRPCSGVVRF-----NNAVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S L TH H DH+ G+ LR I VY PD + Sbjct: 57 --IPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGATIPVYGPPD-----EQG 106 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 FK + V P V+ ++ P+ H ++ + G+ Sbjct: 107 CDDLFKHPGILDFSHTVAPFVV----------FDLQGLQVTPLPLNHSKL-TFGYLLETA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++L+ L N +IID + +H L+ + ++I+ Sbjct: 156 HSRVAWLSDTAGLPDKTLKFLHNNQPQVIIIDCSHAPRAEPPRNHCDLNTVIALNDVIHC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D M+ P +DGM+ Sbjct: 216 PRVILTHISHQFDLWMMEHPLPVGFEAGYDGMEI 249 >gi|68067116|ref|XP_675528.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56494765|emb|CAH96592.1| conserved hypothetical protein [Plasmodium berghei] Length = 388 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 115/311 (36%), Gaps = 78/311 (25%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL------SIDA 78 N KN+R S+ + + +N+ V++D G F +L +++A Sbjct: 83 CYDALAENSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILLNNDKINFSEINLEA 137 Query: 79 VLYTHPHADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 VL TH H D ++GID LR Y+ K K+PIDVY L F Y Sbjct: 138 VLITHSHTDAMNGIDDLRDLQEYERVSYEDIYYYKSKKPIDVYLNDVSYYRLKNGFEYLA 197 Query: 127 KALDDRTYPPIV-------------NPIVIENN--------------------------D 147 K + + V N ++ ENN + Sbjct: 198 KERTENRFYSKVAALNFFILKDVKYNNLIHENNKLDEIKDVNNINNKKCINIHSYDKKDE 257 Query: 148 VPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQN--- 200 + + I QHG+ +G+ GN + Y +D N +E ++ Sbjct: 258 YGFIYTTFEKDKKIRFIPFQHGKNYVCVGYIVGNNHKLVYISDCNYVSNSVIEYIKKFAP 317 Query: 201 LDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-------DMVLKS 252 +D L+IDAL H SHFS+ ES++ LI PK M D+++ +LK Sbjct: 318 IDILVIDALYYKSKHYSHFSMYESIQFSLLIKPKQVYFVGMSCDVEHNITNLYLQKLLKK 377 Query: 253 TPS-RVVPAFD 262 P A D Sbjct: 378 YPDISFSLAHD 388 >gi|146309962|ref|YP_001175036.1| carbon-phosphorus lyase complex accessory protein [Enterobacter sp. 638] gi|145316838|gb|ABP58985.1| PhnP, carbon-phosphorus lyase complex accessory protein [Enterobacter sp. 638] Length = 252 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 99/274 (36%), Gaps = 37/274 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T++G G + VP D AC +RR S + ++ ++D G Sbjct: 2 SLTITLMGTGGAQLVPVFGCDCAACRRARLQEAHRRRPCSAAVKF-----NDAVTLLDAG 56 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + S L TH H DH+ G+ LR I VYA PD + Sbjct: 57 --IPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGATIPVYAPPD-DAGCDDL 110 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 F++ P I++ ++ V + + P+ H ++ + G+ Sbjct: 111 FKH----------PGILDF----SHTVESFVMFELQGLRVTPLPLNHSKL-TFGYLLESA 155 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDALK---NGLHSSHFSLSESLKKIELINP 232 VA+ +D P ++++ L N ++ID +H L+ + E+I Sbjct: 156 HSRVAWLSDTAGLPEKTVKFLLNNQPQCIVIDCSHAPCEETPRNHCDLNTIIALNEVIGC 215 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ILTH+ D ++ P +DGM Sbjct: 216 PQVILTHISHQFDVWLMDNPLPDGFEAGYDGMVL 249 >gi|110644450|ref|YP_672180.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 536] gi|191171947|ref|ZP_03033492.1| phosphonate utilization protein [Escherichia coli F11] gi|300994978|ref|ZP_07181002.1| phosphonate metabolism protein PhnP [Escherichia coli MS 200-1] gi|331681028|ref|ZP_08381665.1| phosphonate metabolism protein PhnP [Escherichia coli H299] gi|110346042|gb|ABG72279.1| PhnP protein [Escherichia coli 536] gi|190907712|gb|EDV67306.1| phosphonate utilization protein [Escherichia coli F11] gi|300304875|gb|EFJ59395.1| phosphonate metabolism protein PhnP [Escherichia coli MS 200-1] gi|331081249|gb|EGI52410.1| phosphonate metabolism protein PhnP [Escherichia coli H299] Length = 252 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 37/265 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECVACVRARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLAD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHSGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVM--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEIEV 251 >gi|91775849|ref|YP_545605.1| putative hydrolase protein [Methylobacillus flagellatus KT] gi|91709836|gb|ABE49764.1| putative hydrolase protein [Methylobacillus flagellatus KT] Length = 100 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G P I C NPKN+R+R S I+ + +++DTGPD Sbjct: 1 MRLTMLGVGSSAGTPVIGCQCATCVSDNPKNKRSRCSSLITL----SNGKNILIDTGPDI 56 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +Q LRE + IDAVLYTH HADH+HGID LR + KQ++ I + Sbjct: 57 RLQALREGISHIDAVLYTHTHADHLHGIDDLRAFCQKQRQQIPL 100 >gi|300938241|ref|ZP_07153008.1| phosphonate metabolism protein PhnP [Escherichia coli MS 21-1] gi|300456785|gb|EFK20278.1| phosphonate metabolism protein PhnP [Escherichia coli MS 21-1] Length = 252 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 98/266 (36%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECVACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ + PS FDGM Sbjct: 227 FDAWLMENALPSGFEAGFDGMVIGVE 252 >gi|170021908|ref|YP_001726862.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli ATCC 8739] gi|169756836|gb|ACA79535.1| phosphonate metabolism [Escherichia coli ATCC 8739] Length = 252 Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G + R Sbjct: 13 AQGVPAWGCECVACARARRSPQYRRQPCSGVVKF-----NEAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDTIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I +LTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVVLTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM Sbjct: 227 FDAWLMENTLPSGFEAGFDGMVI 249 >gi|331675618|ref|ZP_08376365.1| phosphonate metabolism protein PhnP [Escherichia coli TA280] gi|331067226|gb|EGI38634.1| phosphonate metabolism protein PhnP [Escherichia coli TA280] Length = 252 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 98/266 (36%), Gaps = 37/266 (13%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACVRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHSGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVM--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHNRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 D ++ PS FDGM+ Sbjct: 227 FDAWLMENVLPSGFEAGFDGMEIGVE 252 >gi|300818012|ref|ZP_07098225.1| phosphonate metabolism protein PhnP [Escherichia coli MS 107-1] gi|300529422|gb|EFK50484.1| phosphonate metabolism protein PhnP [Escherichia coli MS 107-1] gi|323182198|gb|EFZ67608.1| phosphonate metabolism protein PhnP [Escherichia coli 1357] gi|323946225|gb|EGB42259.1| phosphonate metabolism protein PhnP [Escherichia coli H120] Length = 252 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H+ L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHYDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|301644107|ref|ZP_07244118.1| phosphonate metabolism protein PhnP [Escherichia coli MS 146-1] gi|301077546|gb|EFK92352.1| phosphonate metabolism protein PhnP [Escherichia coli MS 146-1] Length = 252 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H H+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMVHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N +++D + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|301021645|ref|ZP_07185637.1| phosphonate metabolism protein PhnP [Escherichia coli MS 69-1] gi|300397934|gb|EFJ81472.1| phosphonate metabolism protein PhnP [Escherichia coli MS 69-1] Length = 252 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC + RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACARARRSSQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I +Y PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPIYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSLVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L E+I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPRADAPRNHCDLNTVLALNEVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEAGFDGMEI 249 >gi|82779176|ref|YP_405525.1| carbon-phosphorus lyase complex accessory protein [Shigella dysenteriae Sd197] gi|309784323|ref|ZP_07678962.1| phosphonate metabolism protein PhnP [Shigella dysenteriae 1617] gi|81243324|gb|ABB64034.1| phosphonate metabolism [Shigella dysenteriae Sd197] gi|308927830|gb|EFP73298.1| phosphonate metabolism protein PhnP [Shigella dysenteriae 1617] Length = 252 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 96/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + + ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NEAITLIDAGLHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + S L TH H DH+ L PI VY PD + FK Sbjct: 66 LGSFQQFLLTHYHMDHVQ---ELFPLRWGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTV 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIRSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDG++ Sbjct: 227 FDAWLMENALPSGFEAGFDGIEI 249 >gi|261330372|emb|CBH13356.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 367 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 102/327 (31%), Gaps = 77/327 (23%) Query: 18 VPRITG-----DWGACDPT----NPKNRRTRSSLKISRVSERG-SNTTVIVDTGPDFYMQ 67 P ++ C+ KN R S I + +++D G F Sbjct: 30 TPMLSCALSGSPCPNCEEALRCSGSKNHRLNPSFLIQLYHPTDRTVHNILIDCGKTFRES 89 Query: 68 VLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 L+ V AVL TH HAD +GID LR + K PI VYA + + + Sbjct: 90 ALKVFPSFLVRDFSAVLLTHDHADASYGIDDLREFSRK-DVPIGVYADETTLAAMRRVYP 148 Query: 124 YCF--------------KALDDRTYPPIVNPIVI---------------------ENNDV 148 Y F K + + + +N + E + Sbjct: 149 YLFAEDMRSRGAGEPAKKEVKNNKFVATINWELFTRVERTDVVFSPRPKGVTTGNEGDIA 208 Query: 149 PICMKSAGGVIEAIPILQQHG-RISSLGFRFGN---------VAYCTDVNAFPAESLEKL 198 C A V +P+ HG + F + Y +D++ L Sbjct: 209 DGCETGAPAVWSFVPVGVPHGENYRANAFLVPMHDKSESPRLLLYVSDISELEDRFFTDL 268 Query: 199 Q------NLD------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +D L++D L + +H + S+ + IN M ++Y Sbjct: 269 ARSKVLLGVDPAVPIEVLVLDMLSRRPYVAHLHVEASIAAAKRINAAKTYYVGMSHRINY 328 Query: 247 DMVLKSTP-----SRVVPAFDGMQFSS 268 D +++ + + +DG S Sbjct: 329 DEMMQELQQLGLGATMEMGYDGCVVSV 355 >gi|284166691|ref|YP_003404970.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284016346|gb|ADB62297.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 274 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 107/293 (36%), Gaps = 48/293 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G + G P + D C+ + RTR S+ + + ++++D PD Sbjct: 1 MRVTLLGAGDTTGTPTVGCDCDTCEAARERGVERTRFSVHVE---NERVDESLLIDFSPD 57 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 F Q LRE V DA + TH H DH+ G+ G + +DVYAA + +S Sbjct: 58 FRYQFLREDVALPDAAVITHIHFDHLDGL----GNVFRVFDSLDVYAADETDPVTGKSVA 113 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 DD Y ++PI + + G + +P+ +H + G + Sbjct: 114 QTVS--DDYHY---LDPIDVRPTTPLETIHVCGLDVTLVPV--EHPPLVCYGLAIEDPVT 166 Query: 181 ---VAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGL----HS----------------- 215 ++ D + P S E L + D L+ DA+ H Sbjct: 167 GAKLSISGDTSYNVPEASREVLADPDLLLADAIVPAHLCEYHPAGGRHETDDGVPRTFGT 226 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H + +L +N + L H+ D + A DG ++ Sbjct: 227 KHMTREGALDLAAELNAERTRLVHLAHYYPADEAFEE-----PLAVDGERYEL 274 >gi|300920915|ref|ZP_07137309.1| phosphonate metabolism protein PhnP [Escherichia coli MS 115-1] gi|300412143|gb|EFJ95453.1| phosphonate metabolism protein PhnP [Escherichia coli MS 115-1] Length = 252 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 101/263 (38%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + ACD P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACDRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L+N +++D + +H L+ L E+I+ ILTH+ Sbjct: 167 GLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNEVIHSPRVILTHIIHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + P FDGM+ Sbjct: 227 FDAWLMENALPPGFEAGFDGMEI 249 >gi|193062976|ref|ZP_03044068.1| phosphonate utilization protein [Escherichia coli E22] gi|194426791|ref|ZP_03059344.1| phosphonate utilization protein [Escherichia coli B171] gi|260846888|ref|YP_003224666.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O103:H2 str. 12009] gi|192931235|gb|EDV83837.1| phosphonate utilization protein [Escherichia coli E22] gi|194415127|gb|EDX31396.1| phosphonate utilization protein [Escherichia coli B171] gi|257762035|dbj|BAI33532.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O103:H2 str. 12009] Length = 252 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 98/263 (37%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + ACD P+ RR S + ++ ++D G + R Sbjct: 13 AQGVPAWGCECAACDRARRSPQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR PI VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----DQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV----------FDLQGLQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++ + L N ++ID + +H L+ L ++I+ ILTH+ Sbjct: 167 GLPEKTQKFLLNNHPQVMVIDCSHPPREDAPRNHCDLNTVLALNQVIHSPRVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + P FDGM+ Sbjct: 227 FDAWLMENALPPGFEAGFDGMEI 249 >gi|152972967|ref|YP_001338113.1| carbon-phosphorus lyase complex accessory protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957816|gb|ABR79846.1| phosphonate metabolism [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 252 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 41/280 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIV 58 M T G G + VP D AC +RR S ++ ++ ++ Sbjct: 1 MSLTLRLT--GTGGAQLVPVFGCDCAACRRARREENHRRRPCSGVVTF-----NSAVTLL 53 Query: 59 DTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D G PD + S VL TH H DH+ G+ LR I VY PD Sbjct: 54 DAGRPDL---MEHHPAGSFQQVLLTHYHLDHVQGLFPLR---WGVGASIPVYGPPDDA-- 105 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D +P +++ + P M + G + P+ H ++ + G+ Sbjct: 106 ---------GCDDLLKHPGLLD---FSHTVTPFVMFNLQG-LRVTPLPLNHSKL-TFGYL 151 Query: 178 FG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +A+ +D P ++L+ L N +IID + +H L+ + Sbjct: 152 LESAHSRLAWLSDTAGLPDKTLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRSLNQ 211 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +I ILTH+ D M+ P+ +DGM+ + Sbjct: 212 VIGCPRVILTHISHQFDVWMMDNPLPTGFEAGYDGMEIAL 251 >gi|331680220|ref|ZP_08380879.1| phosphonate metabolism protein PhnP [Escherichia coli H591] gi|331071683|gb|EGI43019.1| phosphonate metabolism protein PhnP [Escherichia coli H591] Length = 268 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 29 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 81 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 82 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPGLL 133 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 134 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 182 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 183 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 242 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 243 FDAWLMENALPSGFEVGFDGMEI 265 >gi|238892579|ref|YP_002917313.1| carbon-phosphorus lyase complex accessory protein [Klebsiella pneumoniae NTUH-K2044] gi|238544895|dbj|BAH61246.1| phosphonate utilization protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 252 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 103/280 (36%), Gaps = 41/280 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIV 58 M T G G + VP D AC +RR S ++ ++ ++ Sbjct: 1 MSLTLRLT--GTGGAQLVPVFGCDCAACRRARREESHRRRPCSGVVTF-----NSAVTLL 53 Query: 59 DTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D G PD + S VL TH H DH+ G+ LR I VY PD Sbjct: 54 DAGRPDL---MEHHPAGSFQQVLLTHYHLDHVQGLFPLR---WGVGASIPVYGPPDDA-- 105 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D +P +++ + P M + G + P+ H ++ + G+ Sbjct: 106 ---------GCDDLLKHPGLLD---FSHTVTPFVMFNLQG-LRVTPLPLNHSKL-TFGYL 151 Query: 178 FG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 +A+ +D P +SL+ L N +IID + +H L+ + Sbjct: 152 LESAHSRLAWLSDTAGLPDKSLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRSLNQ 211 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +I ILTH+ D M+ P+ +DGM+ + Sbjct: 212 VIGCPRVILTHISHQFDVWMMDNPLPTGFEAGYDGMEIAL 251 >gi|72392717|ref|XP_847159.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62359204|gb|AAX79647.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70803189|gb|AAZ13093.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 367 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 101/327 (30%), Gaps = 77/327 (23%) Query: 18 VPRITG-----DWGACDPT----NPKNRRTRSSLKISRVSERG-SNTTVIVDTGPDFYMQ 67 P ++ C+ KN R S I + +++D G F Sbjct: 30 TPMLSCALSGSPCPNCEEALRCSGSKNHRLNPSFLIQLYHPTDRTVHNILIDCGKTFRES 89 Query: 68 VLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 L+ V AVL TH HAD +GID LR + K PI VYA + + + Sbjct: 90 ALKVFPSFLVRDFSAVLLTHDHADASYGIDDLREFSRK-DVPIGVYADETTLAAMRGVYP 148 Query: 124 YCF--------------KALDDRTYPPIVNPIVI---------------------ENNDV 148 Y F K + + +N + E + Sbjct: 149 YLFAEDMRSRGAGEPAKKEVKKNKFVATINWELFTRVERMDVVFSPRPKGVTTGNEGDIA 208 Query: 149 PICMKSAGGVIEAIPILQQHG-RISSLGFRFGN---------VAYCTDVNAFPAESLEKL 198 C A V +P+ HG + F + Y +D++ L Sbjct: 209 DGCETGAPAVWSFVPVGVPHGENYRANAFLVPMHDKSESPRLLLYVSDISELEDRFFTDL 268 Query: 199 Q------NLD------FLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +D L++D L + +H + S+ + IN M ++Y Sbjct: 269 ARSKVLLGVDPAVPIEVLVLDMLSRRPYVAHLHVEASIAAAKRINAAKTYYVGMSHRINY 328 Query: 247 DMVLKSTP-----SRVVPAFDGMQFSS 268 D +++ + + +DG S Sbjct: 329 DEMMQELQQLGLGATMEMGYDGCVVSV 355 >gi|289673430|ref|ZP_06494320.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. syringae FF5] Length = 218 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 37/242 (15%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 RR S I +R + + D R S+ +L TH HADH G+ L Sbjct: 2 RRLPCSALIECADQRWLIDSGLTDLTE-------RFPPRSLSGILQTHYHADHAQGLLHL 54 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 R Q I V+ D + L + +++ P I++ + + A Sbjct: 55 R---WGQGLVIPVHGPAD-PEGLADLYKH----------PGILDF----SQPFAAFERRA 96 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL 209 G ++ + H + + G+ F AY TD P ++ E LQ LD L++D Sbjct: 97 LGALQVTALPLAHSK-PTFGYLFEGDGQRFAYLTDTVGLPDDTREYLQRAPLDLLVLDCS 155 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGM 264 + +H L+ +L+ IE + P A+LTH+ LD ++ P VV DG+ Sbjct: 156 MPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSGQLPGNVVVGRDGI 215 Query: 265 QF 266 Sbjct: 216 TV 217 >gi|321253279|ref|XP_003192686.1| hypothetical protein CGB_C2630C [Cryptococcus gattii WM276] gi|317459155|gb|ADV20899.1| conserved hypothetical protein [Cryptococcus gattii WM276] Length = 481 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 103/316 (32%), Gaps = 99/316 (31%) Query: 25 WGACDPT-NP------KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQV 73 C +P KN+R +S+ + + + G V+VD G F Q +R V Sbjct: 82 CACCRSAVDPDVPEGWKNKRGNTSVLLRKQTAEGDWKNVLVDVGKTFREQAMRFFPKWGV 141 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +IDAVL TH HAD G+D LR + ++Q I VY + + + E+F Y Sbjct: 142 KTIDAVLLTHGHADAYFGLDDLREWCVRQGSAIPVYLNKETFRAVEETFPYMVDKTKVSG 201 Query: 134 Y--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---------------------- 169 P + VIE+ + G + P+ HG Sbjct: 202 GGDVPQLIWKVIEDEGE---FQVEGIDVRVFPV--HHGIYFHSVLPPTNAEPVCDPPAKL 256 Query: 170 ---RISSLGFRFG-NVAYCTDVNA-----------------------------------F 190 + L F F ++ Y +DV+ Sbjct: 257 EPEPLICLAFEFDASIIYMSDVSGIPQRTWDRLLQTSSKRQPILPTPVDSRGGEETPRGM 316 Query: 191 PAE-------------------SLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIELI 230 P + N+ LI+DAL H+SHFSL+++L + Sbjct: 317 PENQSISDLASLSISPRRPRHLERTRAHNVPVLIVDALWPTQAHTSHFSLAQALIVALRL 376 Query: 231 NPKNAILTHMHVDLDY 246 + + + Sbjct: 377 RAASTYVIGSTHPTSH 392 >gi|288937600|ref|YP_003441659.1| phosphonate metabolism protein PhnP [Klebsiella variicola At-22] gi|288892309|gb|ADC60627.1| phosphonate metabolism protein PhnP [Klebsiella variicola At-22] Length = 252 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 102/278 (36%), Gaps = 41/278 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIV 58 M T G G + VP D AC +RR S ++ ++ ++ Sbjct: 1 MSLTIRLT--GTGGAQLVPVFGCDCAACRRARREESHRRRPCSGVVTF-----NSAVTLL 53 Query: 59 DTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D G PD + S VL TH H DH+ G+ LR I VY PD Sbjct: 54 DAGRPDL---MEHHPAGSFQQVLLTHYHLDHVQGLFPLR---WGVGASIPVYGPPDDA-- 105 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D +P +++ + P + G + P+ H ++ + G+ Sbjct: 106 ---------GCDDLLKHPGLLD---FSHTVTPFVVFDLQG-LRVTPLPLNHSKL-TFGYL 151 Query: 178 FG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 VA+ +D P ++L+ L N +IID + +H L+ + Sbjct: 152 LESAHSRVAWLSDTVGLPDKTLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRHLNQ 211 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +I ILTH+ LD M+ P+ +DGM+ Sbjct: 212 VIGCPRVILTHISHQLDVWMMDNPLPTGFEAGYDGMEI 249 >gi|206575786|ref|YP_002240947.1| phosphonate utilization protein [Klebsiella pneumoniae 342] gi|290512338|ref|ZP_06551705.1| phosphonate metabolism protein PhnP [Klebsiella sp. 1_1_55] gi|206564844|gb|ACI06620.1| phosphonate utilization protein [Klebsiella pneumoniae 342] gi|289775333|gb|EFD83334.1| phosphonate metabolism protein PhnP [Klebsiella sp. 1_1_55] Length = 252 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 102/278 (36%), Gaps = 41/278 (14%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIV 58 M T G G + VP D AC +RR S ++ ++ ++ Sbjct: 1 MSLTIRLT--GTGGAQLVPVFGCDCAACRRARREESHRRRPCSGVVTF-----NSAVTLL 53 Query: 59 DTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 D G PD + S VL TH H DH+ G+ LR I VY PD Sbjct: 54 DAGRPDL---MEHHPAGSFQQVLLTHYHLDHVQGLFPLR---WGVGASIPVYGPPDDA-- 105 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D +P +++ + P + G + P+ H ++ + G+ Sbjct: 106 ---------GCDDLLKHPGLLD---FSHTVTPFVVFDLQG-LRVTPLPLNHSKL-TFGYL 151 Query: 178 FG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIE 228 VA+ +D P ++L+ L N +IID + +H L+ + Sbjct: 152 LESAHSRVAWLSDTAGLPDKTLKFLLNNRPQAMIIDCSHEPRAQTPRNHNDLNTVRHLNQ 211 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +I ILTH+ LD M+ P+ +DGM+ Sbjct: 212 VIGCPRVILTHISHQLDVWMMDNPLPTGFEAGYDGMEI 249 >gi|157163558|ref|YP_001460876.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli HS] gi|191169264|ref|ZP_03031015.1| phosphonate utilization protein [Escherichia coli B7A] gi|193067937|ref|ZP_03048903.1| phosphonate utilization protein [Escherichia coli E110019] gi|209921582|ref|YP_002295666.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli SE11] gi|218556645|ref|YP_002389559.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli IAI1] gi|218697795|ref|YP_002405462.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 55989] gi|260858197|ref|YP_003232088.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O26:H11 str. 11368] gi|260870846|ref|YP_003237248.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O111:H- str. 11128] gi|293476390|ref|ZP_06664798.1| phosphonate metabolism protein PhnP [Escherichia coli B088] gi|300824651|ref|ZP_07104758.1| phosphonate metabolism protein PhnP [Escherichia coli MS 119-7] gi|300906418|ref|ZP_07124116.1| phosphonate metabolism protein PhnP [Escherichia coli MS 84-1] gi|301302788|ref|ZP_07208917.1| phosphonate metabolism protein PhnP [Escherichia coli MS 124-1] gi|309796901|ref|ZP_07691303.1| phosphonate metabolism protein PhnP [Escherichia coli MS 145-7] gi|331670956|ref|ZP_08371790.1| phosphonate metabolism protein PhnP [Escherichia coli TA271] gi|157069238|gb|ABV08493.1| phosphonate utilization protein [Escherichia coli HS] gi|190900687|gb|EDV60485.1| phosphonate utilization protein [Escherichia coli B7A] gi|192958912|gb|EDV89349.1| phosphonate utilization protein [Escherichia coli E110019] gi|209914841|dbj|BAG79915.1| phosphonate metabolism protein [Escherichia coli SE11] gi|218354527|emb|CAV01404.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli 55989] gi|218363414|emb|CAR01068.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli IAI1] gi|257756846|dbj|BAI28348.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O26:H11 str. 11368] gi|257767202|dbj|BAI38697.1| carbon-phosphorus lyase complex accessory protein PhnP [Escherichia coli O111:H- str. 11128] gi|291320843|gb|EFE60285.1| phosphonate metabolism protein PhnP [Escherichia coli B088] gi|300401866|gb|EFJ85404.1| phosphonate metabolism protein PhnP [Escherichia coli MS 84-1] gi|300522834|gb|EFK43903.1| phosphonate metabolism protein PhnP [Escherichia coli MS 119-7] gi|300842008|gb|EFK69768.1| phosphonate metabolism protein PhnP [Escherichia coli MS 124-1] gi|308119542|gb|EFO56804.1| phosphonate metabolism protein PhnP [Escherichia coli MS 145-7] gi|315253774|gb|EFU33742.1| phosphonate metabolism protein PhnP [Escherichia coli MS 85-1] gi|320200775|gb|EFW75361.1| Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Escherichia coli EC4100B] gi|323155861|gb|EFZ42029.1| phosphonate metabolism protein PhnP [Escherichia coli EPECa14] gi|323175982|gb|EFZ61574.1| phosphonate metabolism protein PhnP [Escherichia coli 1180] gi|324017175|gb|EGB86394.1| phosphonate metabolism protein PhnP [Escherichia coli MS 117-3] gi|324118661|gb|EGC12553.1| phosphonate metabolism protein PhnP [Escherichia coli E1167] gi|331061870|gb|EGI33795.1| phosphonate metabolism protein PhnP [Escherichia coli TA271] Length = 252 Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|222617482|gb|EEE53614.1| hypothetical protein OsJ_36875 [Oryza sativa Japonica Group] Length = 310 Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 94/310 (30%), Gaps = 103/310 (33%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRR---------------- 37 LG G S VP C P N R Sbjct: 27 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVPPELNPNYRFSDSHALILSRIWALV 86 Query: 38 --------------TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAV 79 +SL I + ++ +++D G F QVLR ++ +D++ Sbjct: 87 SAWLLAAADGSDVLCNTSLLIDYCQDEVTHKYILIDVGKTFREQVLRWFIHHKIPCVDSI 146 Query: 80 LYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DD 131 + TH HAD I G+D +R P +Y + M + + F Y + ++ Sbjct: 147 ILTHEHADAILGLDDVRIVQPFSPTNDIEPTPIYLSQFAMNSIAQKFPYLVRKKLKEGEE 206 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP 191 ++ VIE +D+ ++G +P Sbjct: 207 VRRVAQLDWRVIE-SDLQKPFVTSGLEFVPLP---------------------------- 237 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 G H+ H ++L ++ I PK A+L M ++D+ + Sbjct: 238 -------------------TGSHNVHLCWDQTLDAVKRICPKRALLIGMTHEMDHHKDNE 278 Query: 252 STPSRVVPAF 261 + AF Sbjct: 279 TLEEWSRRAF 288 >gi|301330530|ref|ZP_07223141.1| phosphonate metabolism protein PhnP [Escherichia coli MS 78-1] gi|300843513|gb|EFK71273.1| phosphonate metabolism protein PhnP [Escherichia coli MS 78-1] Length = 252 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPG-- 115 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + VP + G ++ P+ H ++ + G+ VA+ +D Sbjct: 116 -------LLDFSHTAVPFVVFDLQG-LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|157156446|ref|YP_001465591.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli E24377A] gi|307312070|ref|ZP_07591707.1| phosphonate metabolism protein PhnP [Escherichia coli W] gi|157078476|gb|ABV18184.1| phosphonate utilization protein [Escherichia coli E24377A] gi|306907877|gb|EFN38378.1| phosphonate metabolism protein PhnP [Escherichia coli W] gi|315063410|gb|ADT77737.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli W] Length = 252 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITMIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|77557054|gb|ABA99850.1| hypothetical protein LOC_Os12g42100 [Oryza sativa Japonica Group] Length = 286 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 92/302 (30%), Gaps = 103/302 (34%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRR---------------- 37 LG G S VP C P N R Sbjct: 27 LVFLGTGCSSAVPNARCLIQPPDPPCAVCSQSLSVPPELNPNYRFSDSHALILSRIWALV 86 Query: 38 --------------TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAV 79 +SL I + ++ +++D G F QVLR ++ +D++ Sbjct: 87 SAWLLAAADGSDVLCNTSLLIDYCQDEVTHKYILIDVGKTFREQVLRWFIHHKIPCVDSI 146 Query: 80 LYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DD 131 + TH HAD I G+D +R P +Y + M + + F Y + ++ Sbjct: 147 ILTHEHADAILGLDDVRIVQPFSPTNDIEPTPIYLSQFAMNSIAQKFPYLVRKKLKEGEE 206 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP 191 ++ VIE +D+ ++G +P Sbjct: 207 VRRVAQLDWRVIE-SDLQKPFVTSGLEFVPLP---------------------------- 237 Query: 192 AESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 G H+ H ++L ++ I PK A+L M ++D+ + Sbjct: 238 -------------------TGSHNVHLCWDQTLDAVKRICPKRALLIGMTHEMDHHKDNE 278 Query: 252 ST 253 + Sbjct: 279 TL 280 >gi|300924360|ref|ZP_07140337.1| phosphonate metabolism protein PhnP [Escherichia coli MS 182-1] gi|300419450|gb|EFK02761.1| phosphonate metabolism protein PhnP [Escherichia coli MS 182-1] Length = 252 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPG-- 115 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + + VP + G ++ P+ H ++ + G+ VA+ +D Sbjct: 116 -------LLDFSHTAVPFVVFDLQG-LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNPVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|256019737|ref|ZP_05433602.1| carbon-phosphorus lyase complex accessory protein [Shigella sp. D9] gi|332103225|gb|EGJ06571.1| phosphonate utilization protein [Shigella sp. D9] Length = 252 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHIDHVQGLFPLR---WGVGDVIPVYGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|78486428|ref|YP_392353.1| carbon-phosphorus lyase complex accessory protein [Thiomicrospira crunogena XCL-2] gi|78364714|gb|ABB42679.1| phosphonate metabolism accessory protein [Thiomicrospira crunogena XCL-2] Length = 255 Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 94/274 (34%), Gaps = 37/274 (13%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M F+ LG G+ P D AC R + + ++D Sbjct: 1 MISDMAFSFLGTGSVKAAPVYGCDCIACQRALSNQTYRRQAA---CGVLEVNGVRFLIDA 57 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + + S+DAVL TH H DH+ G+ +R I V++ D Sbjct: 58 GYLGLEE--KFPPGSLDAVLLTHFHMDHVQGLFPIR---WGMGESIPVFSPDD------- 105 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 D YP I + P K I+ P+ H ++ ++G+ Sbjct: 106 ----PHGCDDLFKYPGIFDFSKKSLPFEPFHFKG----IKITPVPLVHSKL-TMGYIVEF 156 Query: 180 ---NVAYCTDVNAFPAESLEKL---QNLDFLIIDA---LKNGLHSSHFSLSESLKKIELI 230 +AY D + +E L LD LI+D + +H L+ +L E I Sbjct: 157 NGKRLAYLCD-SGILRRDVEALLKEHPLDLLILDCDQPPQEKAPRNHNDLTRALDVYESI 215 Query: 231 NPKNAILTHMHVDLDYDMVLKS--TPSRVVPAFD 262 PK I TH+ LD + P V D Sbjct: 216 QPKQLIFTHISHHLDEYFITHPDCLPDGVAIGLD 249 >gi|261408659|ref|YP_003244900.1| hypothetical protein GYMC10_4876 [Paenibacillus sp. Y412MC10] gi|261285122|gb|ACX67093.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10] Length = 272 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 50/289 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG A+ G P C+ KN RTR+S + + + D PD Y Sbjct: 5 FLGTAAAEGFPNAFCRCEHCNKARELGGKNIRTRTSAIL--------DDVIKFDYSPDSY 56 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 MQ LR+ + +I+ +L TH H DH + D G + P+ +Y M H Sbjct: 57 MQALRDNIDLGAIEHLLVTHSHMDHFNAADLECRREGIAHGLQHPMHIYGNGTVMHHTRA 116 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG 179 + + + Y ++ + A G P+L H R+ L + Sbjct: 117 AIG----RFEGQRY----QFHLLRPYE-----TFAMGDATVTPLLADHDRMETCLLYVIE 163 Query: 180 ----NVAYCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLKKIEL 229 + Y D FP + L+ LD I+D N +H + L+ Sbjct: 164 KEGKKLLYGHDSGWFPDATWAWLKGKSLDCAILDCTHGYTGNSRDRNHMCVETVLEAQRE 223 Query: 230 ------INPK-NAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 + P+ ++TH + L D V +P+ ++PA+DG+ + Sbjct: 224 FQKENILKPEGQIVVTHFSHNSKLLHEDFVRIFSPAGILPAYDGLIINI 272 >gi|66357064|ref|XP_625710.1| PhnP like hydrolase of the metallobetalactamase fold [Cryptosporidium parvum Iowa II] gi|46226654|gb|EAK87633.1| PhnP like hydrolase of the metallobetalactamase fold [Cryptosporidium parvum Iowa II] Length = 354 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 115/350 (32%), Gaps = 86/350 (24%) Query: 1 MKDYYHFTILGCGASLGVPRIT---------GDWG-ACDPTNP----KNRRTRSSLKI-- 44 MK +G G S VP + P KN R S+ + Sbjct: 1 MKLPCGILFVGTGVSSSVPLLHHALNSENYKCLCSYVGKKEGPYDMTKNTRNNVSILVRI 60 Query: 45 ----SRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLR 96 + + +++D G F + + ID+V+ TH H D + G + Sbjct: 61 PNIKEKENGDDDCYNILIDLGKSFREAAISVFPNYSISKIDSVILTHFHNDAVAGFSSIL 120 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESF-----RYCFK----ALDDRTYPPIVNPIVIENND 147 + K++ + +Y + + + + Y F+ D +N I N Sbjct: 121 HFQQKKETLVPIYLNAETLDLVNKRHNKIINNYAFEDNLVNSKDLKRRYELNVFDIYNGK 180 Query: 148 VPIC---------------------------MKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + C ++ + I+ HG +G+ F Sbjct: 181 IEKCLNSNKLYNILDSFNKESKFKNNKEFKKIEFSINNIKITAFPMNHGNCICMGYCFHF 240 Query: 179 --GNVAYCTD-VNAFPAESLEKLQNLD-----FLIIDALKN-GLHSSHFSLSESLKKIEL 229 NV Y +D S+E L ++ LI+D++ + ++H ++S+SLK I+ Sbjct: 241 EEQNVIYISDYTFPMLDSSIEFLNSIKDEKRSTLILDSISYNKISNAHANISQSLKFIQE 300 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPSR---------------VVPAFDGM 264 +P M +++D K + + A+DG+ Sbjct: 301 FSPDYVYFIGMSCSVEHDETNKILNNELINLKNDGKCINTISIELAYDGL 350 >gi|329927332|ref|ZP_08281591.1| hypothetical protein HMPREF9412_4198 [Paenibacillus sp. HGF5] gi|328938471|gb|EGG34856.1| hypothetical protein HMPREF9412_4198 [Paenibacillus sp. HGF5] Length = 272 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 107/289 (37%), Gaps = 50/289 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG A+ G P C+ KN RTR+S + + + D PD Y Sbjct: 5 FLGTAAAEGFPNAFCRCEHCNKARELGGKNIRTRTSAIL--------DDVIKFDYSPDSY 56 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 MQ LR+ + +I+ +L TH H DH + D G + P+ +Y M H Sbjct: 57 MQALRDNIDLGAIEHLLVTHSHMDHFNAADLECRREGIAHGLQHPLHIYGNGTVMHHTRA 116 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG 179 + + + Y ++ + A G P+L H R+ L + Sbjct: 117 AIG----RFEGQRY----QFHLLRPYE-----TFAMGDATVTPLLADHDRMETCLLYVIE 163 Query: 180 ----NVAYCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLKKIEL 229 + Y D FP + L+ LD I+D N +H + L+ Sbjct: 164 KEGKKLLYGHDSGWFPDATWAWLKGKSLDCAILDCTHGYTGNSRDRNHMCVETVLEVQRE 223 Query: 230 ------INPK-NAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 + P+ ++TH + L D V +P+ ++PA+DG+ + Sbjct: 224 FQKENILKPEGQIVVTHFSHNSKLLHEDFVRIFSPAGILPAYDGLIINI 272 >gi|242075728|ref|XP_002447800.1| hypothetical protein SORBIDRAFT_06g015980 [Sorghum bicolor] gi|241938983|gb|EES12128.1| hypothetical protein SORBIDRAFT_06g015980 [Sorghum bicolor] Length = 349 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 65/334 (19%), Positives = 111/334 (33%), Gaps = 85/334 (25%) Query: 7 FTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTR--SSLKISRVSERG 51 LG G S +P C P N R + +K+ + Sbjct: 23 LIFLGTGCSGALPDTWCLLKPSTPPCDVCSMGVSLPPERNPNYRNPILNLVKVYFPTSNY 82 Query: 52 SNTTVIV----------------DTGPDFYMQV-----------------LREQVLSIDA 78 N +++ + + + + A Sbjct: 83 ENRNLVLRQFRDEYPIMVLGWSYEAPSTSAEHLPPRGFSVGLSTTKFLPLIHTALRGFSA 142 Query: 79 --VLYTHPHADHIHGIDGLRGYFLKQKRP----IDVYAAPDCMKHLFESFRYCFKALDDR 132 ++ TH HAD + G+D + + R I ++ M + F Y + + Sbjct: 143 LQIILTHEHADAVLGLDEVWVVQPRNGRNDIEQIPIFLTQFTMDSISRRFPYLIEQKPED 202 Query: 133 T----YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN---VAYC 184 ++ +IE+ DV ++G +E +P+ HG LGF FG VAY Sbjct: 203 GDEDAQAAKIDWKIIED-DVDKPFVASG--LEFMPLPVMHGEGYICLGFLFGRRSKVAYL 259 Query: 185 TDVNAFPAESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +DV+ F ++ + LD LI++A N LH SL I+ I PK A+L Sbjct: 260 SDVSRFLPKTEHVISKSGAGQLDLLILEA--NTLHGV------SLDAIKRIRPKGALLIG 311 Query: 240 MHVDLDYDMVLKSTPSR-------VVPAFDGMQF 266 M ++ + V A DG++ Sbjct: 312 MGHFFEHQRENQMLAEWSIREGIPVQLAHDGLRI 345 >gi|302698161|ref|XP_003038759.1| hypothetical protein SCHCODRAFT_255599 [Schizophyllum commune H4-8] gi|300112456|gb|EFJ03857.1| hypothetical protein SCHCODRAFT_255599 [Schizophyllum commune H4-8] Length = 445 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 74/191 (38%), Gaps = 26/191 (13%) Query: 6 HFTILGCGASLGVPRITG-----------DWGAC----DPTNPKNRRTRSSLKISRVSER 50 F LG G S VP I AC P NRR +S + Sbjct: 4 EFIFLGTGTSSSVPVIHCLTDDPKRPDYVPCRACLSSLTPEGKHNRRRNTSGLLRIKKPG 63 Query: 51 GSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKR 104 T+++D G F + + IDA+L TH HAD ++G+D LRG+ L + + Sbjct: 64 RDALTIVIDAGKTFQAAAIEWFPKYGLRRIDALLITHAHADAMNGLDDLRGWTLRGRIQH 123 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGGVIEAI 162 IDVY + D + + SF Y P +IE+ VP + + Sbjct: 124 HIDVYCSQDTFREVERSFPYLVSKAFASGGGDVPEFVWHIIEDG-VPFQIVDT--DVWIT 180 Query: 163 PILQQHGRISS 173 P HGR+ S Sbjct: 181 PFSVYHGRVFS 191 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 4/83 (4%) Query: 170 RISSLGFRF-GNVAYCTDVNAFPAESLEKLQN---LDFLIIDALKNGLHSSHFSLSESLK 225 GF G + Y +D N P + ++ ++D L H+SHF + ++ Sbjct: 283 PYLCFGFLVHGLLTYISDTNFIPPSAWAVIKKHPVSPLAVVDTLYLAEHASHFGILSAMS 342 Query: 226 KIELINPKNAILTHMHVDLDYDM 248 + + L M ++ +D Sbjct: 343 TAVKLGARRTYLVGMGHEVAHDE 365 >gi|323171516|gb|EFZ57162.1| phosphonate metabolism protein PhnP [Escherichia coli LT-68] Length = 252 Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 37/263 (14%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLTD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I V PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDVIPVCGPPD-----EQGCDDLFKHPGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P ++L+ L N ++ID + +H L+ L ++I ILTH+ Sbjct: 167 GLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQ 226 Query: 244 LDYDMVLKSTPSRVVPAFDGMQF 266 D ++ + PS FDGM+ Sbjct: 227 FDAWLMENALPSGFEVGFDGMEI 249 >gi|293393124|ref|ZP_06637439.1| phosphonate metabolism protein PhnP [Serratia odorifera DSM 4582] gi|291424270|gb|EFE97484.1| phosphonate metabolism protein PhnP [Serratia odorifera DSM 4582] Length = 209 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 30/221 (13%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G + R I L TH H DH+ G+ LR I V+ PD Sbjct: 10 LLDAGLTSLER--RFSAGQIQRFLLTHYHMDHVQGLFHLRWGC---GNSIPVFGPPD--- 61 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + FK + P + P V G ++ P+ H + + G+ Sbjct: 62 --PQGCDDLFKHPGILDFQPPLAPFV----------SVELGGLQITPLPLIHSK-PTHGY 108 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKI 227 +AY TD P ++ LQ+ LD L++D + +H L+ +L+ Sbjct: 109 LIQTPGKALAYLTDTVGLPPQTARFLQHVSLDLLVLDCSLPPQTQAPRNHNDLTRALEIQ 168 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + + P+ +LTH+ LD ++ P + AFD + S Sbjct: 169 QRLQPRRTLLTHISHQLDLWLLDNPLPGGLELAFDNLSVSV 209 >gi|323494516|ref|ZP_08099621.1| carbon-phosphorus lyase complex accessory protein [Vibrio brasiliensis LMG 20546] gi|323311243|gb|EGA64402.1| carbon-phosphorus lyase complex accessory protein [Vibrio brasiliensis LMG 20546] Length = 255 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 93/256 (36%), Gaps = 43/256 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDT-G 61 T+LG S VP + C +P RR ++S + + +++D Sbjct: 1 MKLTLLGTAGSEMVPVYGCECSVCTQAQNDPSLRREKASALLEHNGHK-----LLLDANA 55 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD R SID +L TH H DH+ + LR + I V++ D Sbjct: 56 PDLLK---RFPSGSIDTILLTHYHMDHVISLFDLR---TGKGPTIPVFSPDD-----PRG 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 +K + P I P+ H ++ LG+ F Sbjct: 105 CDDLYKHPGCLDFSSRAKPFE----------PFHWQDITITPLPLIHSKL-CLGYGFEYQ 153 Query: 180 --NVAYCTDVNAFPAESLEKL--QNLDFLIIDAL-------KNGLHSSHFSLSESLKKIE 228 AY TD N P E+ L +N++++IID + L +H +S+ L E Sbjct: 154 GKCFAYLTDTNGLPPETEAWLAQRNVEWMIIDCSFPPIECEQLRLSKNHNDISQILDISE 213 Query: 229 LINPKNAILTHMHVDL 244 P N LTH+ L Sbjct: 214 RCQPANMGLTHLSHTL 229 >gi|238783493|ref|ZP_04627515.1| Beta-lactamase domain protein [Yersinia bercovieri ATCC 43970] gi|238715548|gb|EEQ07538.1| Beta-lactamase domain protein [Yersinia bercovieri ATCC 43970] Length = 229 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 87/242 (35%), Gaps = 35/242 (14%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHI 89 P R S + E ++D G Q I L TH H DH+ Sbjct: 7 RAQPALGRKACSAMVRYQGETS-----LIDAGLPTLNQQFAAG--EIQRFLLTHYHMDHV 59 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 G+ LR I VY PD + +K + P + P Sbjct: 60 QGLFPLRWGC---GNSIPVYGPPD-----PDGCDDLYKHPGILAFQPPLQPF-------- 103 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDF 203 G + P+ H +I + G+ + +AY TD PA+S L +N+D Sbjct: 104 --HGVRFGQLRVTPVPLNHSKI-TFGYLLQSHNRTIAYLTDTIGLPADSALFLASKNIDL 160 Query: 204 LIIDALKNG---LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 L++D +H ++ +L +L+ P +LTH+ LD ++ P+ V A Sbjct: 161 LVMDCSHPPQIPPPRNHNDVTMALAVADLLRPTAMLLTHISHQLDRWLLDNPLPTGVAVA 220 Query: 261 FD 262 D Sbjct: 221 HD 222 >gi|14591382|ref|NP_143460.1| PHNP protein [Pyrococcus horikoshii OT3] gi|3258036|dbj|BAA30719.1| 249aa long hypothetical PHNP protein [Pyrococcus horikoshii OT3] Length = 249 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 43/272 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +G G S G+P D C+ R ++ + E G ++ D G D + Sbjct: 5 FIGTGGSEGIPVHLCDCNTCNEARKFRFAQRRPSTLAVIGENGEV--ILFDVGTDIREFL 62 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 V +DA+ TH H DHI+G+ LR R ++YA L Sbjct: 63 ---NVP-LDAIFLTHWHHDHIYGLYKLRWIA----RETNLYAPEGHADALIL-------- 106 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYC 184 P + P +I+ + K G I+ + H +I +LG+ VA Sbjct: 107 ----QDPKNLRPKIIKAGE-----KIRIGDIKVTSVKLNH-QIETLGYIIEEDGKRVAIL 156 Query: 185 TDVNAFPAESLEKLQN---LDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAILTH 239 D P E+ E L++ L I+DA H +++E+++ I + +L+H Sbjct: 157 YDTKGLPPETREYLEDISPLRVAIVDATYPPGFVDPYHNNVNEAVEMSIDI-AERIVLSH 215 Query: 240 MHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 + +L + + K +V+ A+DGM F Sbjct: 216 ISHKNLPFLKLVNYTRKMWGGKVLVAYDGMVF 247 >gi|324015801|gb|EGB85020.1| phosphonate metabolism protein PhnP [Escherichia coli MS 60-1] Length = 228 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 91/262 (34%), Gaps = 55/262 (20%) Query: 15 SLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 + GVP + AC P+ RR S + ++ ++D G R Sbjct: 13 AQGVPAWGCECVACVRARRSPQYRRQPCSGVVKF-----NDAITLIDAGRHDLAD--RWS 65 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S L TH H DH+ G+ LR I VY PD + FK Sbjct: 66 PGSFQQFLLTHYHMDHVQGLFPLR---WGVGDQIPVYGPPD-----EQGCDDLFKHSGLL 117 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + V P V+ G ++ P+ H ++ + G+ VA+ +D Sbjct: 118 DFSHTVEPFVM--------FDLQG--LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTA 166 Query: 189 AFPAESLEKLQN--LDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 P ++L+ L+N ++ID SH ILTH+ D Sbjct: 167 GLPEKTLKFLRNNQPQVMVIDC-------SHS--------------PRVILTHISHQFDA 205 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 ++ + PS FDGM+ Sbjct: 206 WLMENALPSGFEAGFDGMEIEV 227 >gi|254173232|ref|ZP_04879905.1| ATP-binding protein phnp [Thermococcus sp. AM4] gi|214032641|gb|EEB73470.1| ATP-binding protein phnp [Thermococcus sp. AM4] Length = 255 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 96/267 (35%), Gaps = 34/267 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ C NP RRTR SL +VD P Sbjct: 1 MKVVILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYFEGT---------LVDPSP 51 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + + R ++ VL TH H DH+ G+ L+ + + I Y+ + ++ Sbjct: 52 DLHYHLERLN-REVEQVLITHGHFDHVFGLPELQVF-----KRISFYSHREALEVAKSLA 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 R F + N++ ++ G + + H +++ GF Sbjct: 106 RLAFGSES-------PEGHEWAYNELEFWEETRIGKMRVVHFPVTH-TVTAGGFVIEVKG 157 Query: 180 -NVAYCTDVNAF---PAESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELINPKN 234 +A D ++++ ++ D LI + SH + E+++ + + Sbjct: 158 KRIAITGDTGPEILKDEKAIKLMKGADLLIAEMTHREAIPGSHLGVREAIELAKRVGAGY 217 Query: 235 AILTHMHVD-LDYDMVLKSTPSRVVPA 260 + H+ ++++ K +P Sbjct: 218 TVFAHISHSNYPHEVLEKKVREAGIPG 244 >gi|268679800|ref|YP_003304231.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268617831|gb|ACZ12196.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 246 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 90/248 (36%), Gaps = 36/248 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR-SSLKISRVSERGSNTTVIVDTGPD 63 F LG + G+P C+ R +S + + +++D G D Sbjct: 1 MKFEFLGTADTGGIPLHLCSCEVCEEARLNQTSNRSTSAFLEL----DDGSVILLDAGCD 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + R +I AV TH HADH+ G+ LR K + I Y D E F Sbjct: 57 SL--MDRFNTTTIRAVFLTHFHADHVLGLIRLR----KSAQKIICYTPDDT-----EGFG 105 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 ++ Y + +E ++ + + H ++ + GF Sbjct: 106 DLLVHKNNIEYRIVAPFETVE-----------IAGVKIVAVPLLHSKV-THGFVLFTCKK 153 Query: 180 NVAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSS--HFSLSESLKKIELINPKNA 235 VAY TD ESL L Q+LD+L +DA S H + + IE INP+ Sbjct: 154 RVAYLTDCGGMSEESLLFLKEQHLDYLFLDAAYTPSFDSDKHLNWESAHALIERINPEYG 213 Query: 236 ILTHMHVD 243 L H Sbjct: 214 YLIHASCH 221 >gi|14520773|ref|NP_126248.1| atp-binding protein phnp (phnp) [Pyrococcus abyssi GE5] gi|5457989|emb|CAB49479.1| Alkylphosphonate uptake/carbon-phosphorus lyase, membrane bound subunit, phnP homolog [Pyrococcus abyssi GE5] Length = 249 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 104/275 (37%), Gaps = 49/275 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +G G S G+P + +C+ RR + I E V++D G D Sbjct: 5 FIGTGGSEGIPVHLCNCRSCNEARKFGFAQRRPSTLAIIGNKGE-----VVLIDVGTDIR 59 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 + IDA+ TH H DHI+G+ LR R ++YA L Sbjct: 60 EFL----NTPIDAIFLTHWHHDHIYGLYKLRWIA----RETELYAPRGHADALIL----- 106 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NV 181 P + P +I D K ++ + H ++ +LG+ NV Sbjct: 107 -------QDPKNLKPNIIRAGD-----KIKINGLKITAVKLNH-QVETLGYIIEENGKNV 153 Query: 182 AYCTDVNAFPAES---LEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAI 236 A D P E+ LEKL L I+DA H ++ E+ + + + Sbjct: 154 AVLYDTKGLPRETEIILEKLSPLRLAIVDATYPPGFNDPYHNNVDEAGEMGIKY-AERVV 212 Query: 237 LTHMHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 L+H+ +L + + V + RV+ A+DGM F Sbjct: 213 LSHISHKNLPFLELVNYVRRKWDDRVLVAYDGMVF 247 >gi|330900483|gb|EGH31902.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 185 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 34/211 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC + RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACAAARADHDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R S+ +L TH HADH G+ LR Q I V+ D + L + + Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLY 109 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 ++ P I++ + + A G ++ + H + + G+ F Sbjct: 110 KH----------PGILDF----SQPFAAFERRALGALQVTALPLVHSK-PTFGYLFEGDG 154 Query: 180 -NVAYCTDVNAFPAESLEKLQN--LDFLIID 207 AY TD P ++ E LQ LD L++D Sbjct: 155 QRFAYLTDTVGLPGDTREYLQRAPLDLLVLD 185 >gi|302879948|ref|YP_003848512.1| phosphonate metabolism protein PhnP [Gallionella capsiferriformans ES-2] gi|302582737|gb|ADL56748.1| phosphonate metabolism protein PhnP [Gallionella capsiferriformans ES-2] Length = 253 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 93/278 (33%), Gaps = 41/278 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG GA+ GVP D C R + I + ++D Sbjct: 1 MQLTFLGTGAAGGVPLWGCDCLICRRARIDVSAIRRPNCALIEADGVKLLLDAGVMDVCE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 F S+ A+L TH H DH+ G+ R ++V+A D + + + Sbjct: 61 RFPS-------GSLSAILITHFHPDHVQGLFHWRWGV----GELNVFAPHDV-EGCADLY 108 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 +Y P ++ + G + P+ H + +LG+ Sbjct: 109 KY---------------PGPLKFKHLSKFESFEVGGVRITPVPLVHSK-PTLGYCIEHNG 152 Query: 180 -NVAYCTDVNAFPAESLEKLQ--NLDFLIIDALKN---GLHSSHFSLSESLKKIELINPK 233 +AY TD P + E L + +D +HF E L+ ++ Sbjct: 153 ARLAYLTDSREIPPATTEFLTQWQPHTICLDCTYPPGVEGKRNHFDFPEVLELSKIYPDS 212 Query: 234 NAILTHMHVDLDYDMVLKSTP--SRVVPAFDGMQFSSP 269 +L H+ LD ++ R+ A DG + P Sbjct: 213 YIVLMHISHSLDVWLLNHPLALTGRLSLARDGDRLDIP 250 >gi|108862966|gb|ABA99851.2| hypothetical protein LOC_Os12g42110 [Oryza sativa Japonica Group] Length = 395 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 88/244 (36%), Gaps = 66/244 (27%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGID 93 +SL I + ++ +++D G F QVLR ++ +D+++ TH HAD I G+D Sbjct: 136 CNTSLLIDYCQDENAHKYILIDVGKTFREQVLRWFVHHKIPCVDSIILTHEHADAILGLD 195 Query: 94 GLRGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIEN 145 +R P +Y + M + + F Y + ++ ++ VIE Sbjct: 196 DVRIVQSFSPTNDIEPTPIYLSQFAMDSIAQKFPYLVRKKLKEGEEVRRVAQLDWRVIE- 254 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 +D+ I ++G +P Sbjct: 255 SDLQIPFVTSGLEFVPLP------------------------------------------ 272 Query: 206 IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVP- 259 G H+ H ++L ++ I PK A+L M ++D+ ++ + Sbjct: 273 -----TGSHNVHLCWDQTLDAVKRICPKRALLIGMTDEMDHHKDNETLEEWSRRSGIFLS 327 Query: 260 AFDG 263 ++DG Sbjct: 328 SYDG 331 >gi|157869425|ref|XP_001683264.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224148|emb|CAJ04530.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 426 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 109/362 (30%), Gaps = 115/362 (31%) Query: 4 YYHFTILGCGASLGVPRITG---DWGACDP--TNP--KNRRTRSSLKISRVSERG----S 52 T +G G S VP I D AC NP NRR SL IS G Sbjct: 6 RMRLTFVGTGVSSAVPVIGHLTTDC-ACRDAIANPSGPNRRNNVSLLISLPFAEGKSGVE 64 Query: 53 NTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGL------------- 95 V++D G F +R +V +DA+L TH HAD +H ++ L Sbjct: 65 WHHVLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCGMQAEAAARYAQ 124 Query: 96 ----------------RGYFLKQKRPIDVYAAPDCMKHL--------FESFR-------- 123 + R + + + + +SF Sbjct: 125 SVSPSSLPSSAGRTLASAVVPRTLRRVPTFLTAPTLDQIAMVSPELVTQSFHIGAAPTTG 184 Query: 124 -------------------------------YCFKALDDRTYPPIVNPIVIENNDVPICM 152 Y R + P + + + Sbjct: 185 TAYHSALAATADMTARSSSSAEVLSTVMDIFYMDDTKPQRMHVPFGPLSLAASAARGVNA 244 Query: 153 KSAGGVIEAIPILQQHGR-ISSLGFRFGN-----------------VAYCTDVNAFPAES 194 A + +HG+ S+ + FG V Y +DV+ PA S Sbjct: 245 TDAASDLPFYSFPVEHGKGYISMAWVFGRGTAFKSRQTQQQQQGSCVVYISDVSHIPATS 304 Query: 195 LEKLQNL---DFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + LQ+L D L++D L +SH+ E++ + + P+ M L++ Sbjct: 305 MAFLQDLVKIDVLVLDLLAEHGAPSASHYCADEAIPLVVALAPRRTYFVGMFCSLEHHRT 364 Query: 250 LK 251 + Sbjct: 365 NE 366 >gi|209879519|ref|XP_002141200.1| hypothetical protein [Cryptosporidium muris RN66] gi|209556806|gb|EEA06851.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 372 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 116/359 (32%), Gaps = 103/359 (28%) Query: 9 ILGCGASLGVP---------RITGDWG-ACDPTNPK-----NRRTRSSLKISRVSERGSN 53 LG GAS VP R +PK N R S+ I + + Sbjct: 8 FLGTGASSCVPILHHVLEPERYDCFCSQILKEHDPKIDKSKNIRNNVSIMIRIPRKDANR 67 Query: 54 T-----------------------TVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHA 86 ++ D G F VL + ++ +I++++ TH H Sbjct: 68 KKLSESEIPYDCVDNFTENHEVYHNILFDMGKTFRSSVLSIFPKFKISAINSIILTHFHD 127 Query: 87 DHIHGIDGLRGYFLKQKR---PIDVYAAPDCMKHLFESFR-------------------- 123 D + G++ + P+ +Y D +K +++ F Sbjct: 128 DAVGGLNYASYFVKNIHDSNIPLPIYMNSDTIKFVYKRFHNSIIDDLNRDCKVLQFGHSS 187 Query: 124 YCF-------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 Y + + Y + + E ++ I+ HG Sbjct: 188 YELNVLDILLGRVTNCNSHEAIQYYLSLKDSIDEPESRFNIVEFFIEDIKITSFPMYHGN 247 Query: 171 ISSLGFRF----GNVAYCTD-VNAFPAESLEKLQ----NLDFLIIDALK-NGLHSSHFSL 220 +GF NV + +D P SL+ L+ N+ LI+D++ +SH ++ Sbjct: 248 CICMGFCIHYPYTNVIFISDYTFPIPKVSLDFLKSMEYNVSILILDSIAFKKSSNSHATI 307 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS---------------RVVPAFDGM 264 SESL+ ++INP M DL+Y+ K A+DG+ Sbjct: 308 SESLELAQIINPHFLYFVGMSCDLEYNTGNKKLQEILIQLKRSGKCCSIKSAQLAYDGL 366 >gi|146086722|ref|XP_001465625.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069724|emb|CAM68050.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 426 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 111/364 (30%), Gaps = 115/364 (31%) Query: 4 YYHFTILGCGASLGVPRITG---DWGACDP--TNP--KNRRTRSSLKISRVSERGSNT-- 54 T +G G S +P I D AC NP NRR SL IS G + Sbjct: 6 RMRLTFVGTGVSSAIPVIGHLTTDC-ACRDAIANPSGPNRRNNVSLLISLPFAEGESGVE 64 Query: 55 --TVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG----------- 97 V++D G F +R +V +DA+L TH HAD +H ++ L G Sbjct: 65 WHHVLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCGMQAEAAARYAQ 124 Query: 98 --------------YFLKQKRPIDVYAAPDCMKHL--------FESFR------------ 123 + R + + + + +SF Sbjct: 125 SSSPSSAARTLAPTVVPRTLRRVPTFLTAPTLDQIAMVSPELVTQSFHIGAAPTTEMAYH 184 Query: 124 ---------------------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y R + P + + A Sbjct: 185 SALAATADTTAGSSSSAEALSTVMDIFYMDDKKPQRMHVPFGPLSPAASAARGVNATDAA 244 Query: 157 GVIEAIPILQQHGR-ISSLGFRFGN---------------------VAYCTDVNAFPAES 194 + +HG+ S+ + FG V Y +DV+ PA S Sbjct: 245 SDLPFYSFPVEHGKGYVSMAWVFGRGTAFKSRQTQQQGQQQEEGSCVVYISDVSHIPATS 304 Query: 195 LEKLQNL---DFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + LQ+L D L++D L +SH+ E++ + + P+ M L++ Sbjct: 305 MAFLQDLVKIDVLVLDLLAEHGAPSASHYCADEAIPLVVALAPRRTYFVGMFCSLEHHRA 364 Query: 250 LKST 253 ++ Sbjct: 365 NEAL 368 >gi|149187884|ref|ZP_01866180.1| Beta-lactamase-like protein [Vibrio shilonii AK1] gi|148838280|gb|EDL55221.1| Beta-lactamase-like protein [Vibrio shilonii AK1] Length = 255 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 98/282 (34%), Gaps = 49/282 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDT-G 61 +LG G S VP D C RR +SS + + +++D Sbjct: 1 MKLVMLGTGNSAMVPVWGCDCEICAEARLDRTLRREKSSAYVEH-----NGRKLLLDANA 55 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD R SID +L TH H DH+H + LR + I V+A D + Sbjct: 56 PDLLD---RFPPGSIDKILLTHFHMDHVHSLFDLR---WGKGALIPVHAPED-----EQG 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 +K YP +++ + I P+ H R +G+ F Sbjct: 105 CDDLYK------YPGVLDFSQRSLPLQSFIWQ----DITVTPLPLNHSR-PCVGYAFELN 153 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNG---LH----SSHFSLSESLKKIE 228 +AY TD N P + + L+ +D+++ D H ++H + + E Sbjct: 154 GHCIAYLTDTNGLPEATTQWLKQRTVDWIVTDCSFPPIECEHTRLSNNHNDIYQVQNIAE 213 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTP----SRVVPAFDGMQF 266 P+ L H+ ++ K P DG + Sbjct: 214 QCQPERIGLIHLGHNVLLW--AKRHPQCFSDSFQLLHDGQEI 253 >gi|330981639|gb|EGH79742.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 206 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 32/226 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ ++D+G + R S+ +L TH HADH G+ LR Q I V+ Sbjct: 1 ADQRWLIDSGLTDLTE--RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGP 55 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 D + L + +++ P I++ + + A G ++ + H + Sbjct: 56 AD-PEGLADLYKH----------PGILDF----SQPFAAFERRALGALQVTALPLAHSK- 99 Query: 172 SSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSE 222 + G+ F AY TD P ++ E LQ LD L++D + +H L+ Sbjct: 100 PTFGYLFEGDGQRFAYLTDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTL 159 Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLK--STPSRVVPAFDGMQF 266 +L+ IE + P A+LTH+ LD ++ P VV D M Sbjct: 160 ALQTIEWLRPGRAVLTHVGHTLDAWLMEHSGQLPGNVVVGRDEMSV 205 >gi|254173635|ref|ZP_04880307.1| phnp protein [Thermococcus sp. AM4] gi|214032327|gb|EEB73157.1| phnp protein [Thermococcus sp. AM4] Length = 249 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 100/274 (36%), Gaps = 47/274 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P C +R S+L + + V+ D G D Sbjct: 5 FIGTGGSEGIPAHLCTCSTCSEARKFGFAQRRPSTLAVIT----DNRKAVLFDVGTDIRD 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + V ++A+ TH H DHI+G+ LR R +YA L Sbjct: 61 FL---NVP-LEAIFLTHWHHDHIYGLYKLR----WMARETVLYAPKGSADALILQN---- 108 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + P ++ + + + HG + + G+ +VA Sbjct: 109 --------PKNLRPRTLKPFE-----TVELDTLRITALKLNHG-VETFGYLIEEDGKSVA 154 Query: 183 YCTDVNAFPAESLEKLQ---NLDFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAIL 237 D P E+ E L+ L I+DA H ++ E+ + + + +L Sbjct: 155 LLYDTKGLPEETREFLEERAPLRLAIVDATYPPGFEDPYHNNVDEAAELGLKL-AERTVL 213 Query: 238 THMHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 +H+ +L + D V K +RV+ A+DGM F Sbjct: 214 SHISHKNLPFLELTDYVRKRWGNRVLVAYDGMVF 247 >gi|240102275|ref|YP_002958583.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] gi|239909828|gb|ACS32719.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] Length = 255 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 96/267 (35%), Gaps = 34/267 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ C NP RRTR SL + +VD P Sbjct: 1 MKVVILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYFDKT---------LVDPSP 51 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + + R ++ VL TH H DHI G+ L+ + + + Y+ + ++ Sbjct: 52 DLHYHLERLN-KRVERVLITHGHFDHIFGLPELQVF-----KRLKFYSHREALEVAKSLA 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 R F + N + ++ G ++ + H +++ GF Sbjct: 106 RLAFGSES-------PEGHEWSYNKLEFWEETRVGKMKVVHFPVTH-TVTAGGFVIEVGG 157 Query: 180 -NVAYCTDVNAF---PAESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELINPKN 234 +A D +++ ++ D LI + SH + E+++ + + Sbjct: 158 KRIAITGDTGPEILKDERAIKLMEGADLLIAEMTHREAIPGSHLGVREAIELAKRVGAGY 217 Query: 235 AILTHMHVD-LDYDMVLKSTPSRVVPA 260 + H+ ++++ K +P Sbjct: 218 TVFAHISHSNYPHEVLEKRVREAGIPG 244 >gi|240103210|ref|YP_002959519.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] gi|239910764|gb|ACS33655.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] Length = 249 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 101/274 (36%), Gaps = 47/274 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P C +R S+L + + V+ D G D Sbjct: 5 FIGTGGSEGIPAHLCTCSTCTEARKFGFAQRRPSTLAVIT----DNRKAVLFDVGTDIRD 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + V ++A+ TH H DHI+G+ LR R +YA L Sbjct: 61 FL---NVP-LEAIFLTHWHHDHIYGLYKLR----WMARGTVLYAPKGSADALIL------ 106 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P I+ P D ++ + HG + +LG+ +VA Sbjct: 107 -QDPKNLRPRILKPFDTLEVD----------TLKITTLKLNHG-VETLGYLIEEDGKSVA 154 Query: 183 YCTDVNAFPAESLEKLQ---NLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAIL 237 D P E+ E L+ L I+DA H ++ E+ + + + +L Sbjct: 155 LLYDTKGLPEETQEFLEERAPLRLAIVDATYPPGFDDPYHNNVDEAAELGLRL-AERTVL 213 Query: 238 THMHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 +H+ +L + D V K +RV+ A+DGM F Sbjct: 214 SHISHKNLPFLELTDYVRKRWGTRVLVAYDGMVF 247 >gi|18977990|ref|NP_579347.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] gi|18893768|gb|AAL81742.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] Length = 249 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 47/274 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P + C +R S+L + + E G ++ D G D Sbjct: 5 FIGTGGSEGIPTHLCECETCSEARRLKFAQRRPSTLAV--IGEEGEV--ILFDVGTDIRE 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + V +DA+ TH H DHI+G+ LR + K +YA L Sbjct: 61 FL---NVP-LDAIFLTHWHHDHIYGLYKLRWIARETK----LYAPEGHADALIL------ 106 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + PI I+ N+ K G I + H ++ +LG+ +VA Sbjct: 107 ------QDPKNLRPITIKANE-----KIKIGKITVTSVRLNH-QVETLGYVIEENGKSVA 154 Query: 183 YCTDVNAFPAESLEKL---QNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAIL 237 D P+E+ E L + I+DA H ++ E+++ I + +L Sbjct: 155 ILYDTKGLPSETREYLLKISPVRTAIVDATYPPGFMDPYHNNVDEAVEMSIDI-AERVVL 213 Query: 238 THMHV-DLDYDMV----LKSTPSRVVPAFDGMQF 266 +H+ +L + + K +V+ A+D M F Sbjct: 214 SHISHKNLPFLKLVKYTRKKWGGKVLVAYDNMVF 247 >gi|238799280|ref|ZP_04642725.1| Beta-lactamase domain protein [Yersinia mollaretii ATCC 43969] gi|238716884|gb|EEQ08755.1| Beta-lactamase domain protein [Yersinia mollaretii ATCC 43969] Length = 210 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 89/230 (38%), Gaps = 32/230 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R T ++D G Q I L TH H DH+ G+ LR I VY Sbjct: 3 RYREETTLIDAGLPTLDQQFAAG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNSIPVY 57 Query: 110 AAPDCMKHLFESFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 PD + +K + PP+ + G ++ P+ H Sbjct: 58 GPPD-----PDGCDDLYKHPGILAFQPPLRAFHSVR-----------FGQLQVTPVPLNH 101 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNG---LHSSHFS 219 +I + G+ + +AY TD PA+S L +N+D L++D +H Sbjct: 102 SKI-TFGYLLQSHNRTLAYLTDTIGLPADSALFLASKNIDLLVMDCSHPPQIPPPRNHND 160 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 ++ +L +L+ P +LTH+ LD ++ S P+ V A D + P Sbjct: 161 ITMALAIGDLLMPTALLLTHISHQLDRWLLDNSLPAGVTIAHDNQTIALP 210 >gi|332157833|ref|YP_004423112.1| atp-binding protein phnp (phnp) [Pyrococcus sp. NA2] gi|331033296|gb|AEC51108.1| atp-binding protein phnp (phnp) [Pyrococcus sp. NA2] Length = 249 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 47/274 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P + +C+ +R S+L I S ++ D G D Sbjct: 5 FIGTGGSEGIPVHLCNCSSCNEARKFKFAQRKPSTLAIVSKS----GNVLLFDVGTDIRE 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + V +DA+ TH H DHI+G+ LR + K +YA L Sbjct: 61 FL---NVP-LDAIFLTHWHHDHIYGLYKLRWIARETK----LYAPKGHADALIL------ 106 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + P +I+ + G ++ + H ++ + G+ VA Sbjct: 107 ------KDPKNLRPRIIKAEE-----SFYFGDLKVKSVKLNH-QVETFGYIVEEYGKRVA 154 Query: 183 YCTDVNAFPAES---LEKLQNLDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAIL 237 D P + LE+L L +I+DA + H ++ E + I + +L Sbjct: 155 ILYDTKGLPRRTEALLEELTPLRLVIVDATYPPGYDDPYHNNVDEGAEIGVKI-AERTVL 213 Query: 238 THMHV-DLDYDMVLK----STPSRVVPAFDGMQF 266 +H+ +L + +++ RV+ A+DGM F Sbjct: 214 SHISHKNLPFLELVRYTKEKWKDRVLVAYDGMVF 247 >gi|322491805|emb|CBZ27078.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 429 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 109/367 (29%), Gaps = 118/367 (32%) Query: 4 YYHFTILGCGASLGVPRITG---DWGACDP--TNP--KNRRTRSSLKISRVSERG----S 52 T +G G S +P I D AC NP NRR SL IS G Sbjct: 6 RMRLTFVGTGVSSAIPVIGHLTTDC-ACRDAIANPSGPNRRNNVSLLISLPFSDGKSGVE 64 Query: 53 NTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG----------- 97 V++D G F +R +V +DA+L TH HAD +H ++ L G Sbjct: 65 WHHVLIDCGKTFRSAYMRVLAPMRVQYVDALLITHGHADAMHCVEELCGMQAEAAARYTQ 124 Query: 98 -----------------YFLKQKRPIDVYAAPDCMKHL------------------FESF 122 + R + + + + Sbjct: 125 SASTSSSSSAARTLAPAVIPRTLRRVPTFVTAPTLDQIAMVSPELVTRSFHVGAAPTTGM 184 Query: 123 RY--------------------------CFKALDDRT---YPPIVNPIVIENNDVPICMK 153 Y F D + + P + + Sbjct: 185 AYHSALAATADTIARSSSSAEALSTVMDIFYMDDKKPQRMHVPFGPLSPAASTPRGVHDT 244 Query: 154 SAGGVIEAIPILQQHGR-ISSLGFRFGN---------------------VAYCTDVNAFP 191 A + +HG+ S+ + FG V Y +DV+ P Sbjct: 245 DAASDLPFYSFPVEHGKGYISMAWVFGRGTAFKSQQAPQQGPQQREGSCVVYISDVSHIP 304 Query: 192 AESLEKLQNL---DFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 A S+ LQ+L D L++D L +SH+ E++ + + P+ M L++ Sbjct: 305 ATSMAFLQDLVKIDVLVLDLLAEHGAPSASHYCADEAIPLVVALAPRRTYFVGMFCSLEH 364 Query: 247 DMVLKST 253 K+ Sbjct: 365 HRTNKAL 371 >gi|332083595|gb|EGI88815.1| phosphonate metabolism protein PhnP [Shigella boydii 5216-82] Length = 209 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 30/219 (13%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G + R S L TH H DH+ G+ LR PI VY PD Sbjct: 9 LIDAG--LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD--- 60 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + FK + V P V+ ++ P+ H ++ + G+ Sbjct: 61 --EQGCDDLFKHPGLLDFSHTVEPFVV----------FDLQGLQVTPLPLNHSKL-TFGY 107 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKI 227 VA+ +D P ++L+ L+N ++ID + SH L+ L Sbjct: 108 LLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALN 167 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++I ILTH+ D ++ + PS FDGM+ Sbjct: 168 QVIRSPRVILTHISHQFDAWLMENALPSGFEAGFDGMEI 206 >gi|296271885|ref|YP_003654516.1| carbon-phosphorus lyase complex accessory protein [Arcobacter nitrofigilis DSM 7299] gi|296096060|gb|ADG92010.1| carbon-phosphorus lyase complex accessory protein [Arcobacter nitrofigilis DSM 7299] Length = 241 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 100/272 (36%), Gaps = 40/272 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 LG S G+P C N+ +S ++ + +++D G + Sbjct: 1 MKLDFLGTADSGGIPVHNCKCLICQEYRENNKINLATSAYLTCK----NGEIILLDAGIE 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + + I A+ TH HADH G+ LR + I+ Y D + F Sbjct: 57 NISTIFDNK--KIKAIFLTHFHADHTLGLLRLR----YSAQSIECYHPKD-----KKGFA 105 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 FK Y IEN + PI +H + ++ G+ + Sbjct: 106 DLFKHTKAINY--------IENTPFT---PIKINELIFTPIPLKHSK-NTTGYLIESENK 153 Query: 181 -VAYCTDVNAFPAESLEKL--QNLDFLIIDA-LKNGLHS-SHFSLSESLKKIELINPKNA 235 +AY TD ES+ L +N+D IDA L ++ +H + E+ K ++ IN K + Sbjct: 154 TIAYLTDCAGISKESMNFLLSKNIDECYIDAGLAPNFNNGNHLNYEEATKLLDRINAKKS 213 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFS 267 L H + + + + ++ M S Sbjct: 214 HLIHASH----NTLTHIKSNNIKLKYNFMNIS 241 >gi|57640223|ref|YP_182701.1| phosphonate matabolism protein PhnP-like protein [Thermococcus kodakarensis KOD1] gi|57158547|dbj|BAD84477.1| phosphonate matabolism protein PhnP homolog, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 249 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 107/274 (39%), Gaps = 47/274 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P +C+ +R S+L + + TV+ D G D Sbjct: 5 FIGTGGSEGIPAHLCTCSSCNEARKFGFAQRRPSTLAVVTE----NRKTVLFDVGTDIRD 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + V ++A+ TH H DHI+G+ LR ++YA L + Sbjct: 61 FL---NVP-LEAIFLTHWHHDHIYGLYKLR----WMAMETELYAPEGQADALILN----- 107 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + P ++ D + ++ + H ++ +LG+ + A Sbjct: 108 -------EPKNLKPKTLKPMD-----RIKIDTLKITALKLNH-QVETLGYLIEEDGKSFA 154 Query: 183 YCTDVNAFPAESLEKLQN---LDFLIIDALKNGLH--SSHFSLSESLKKIELINPKNAIL 237 D P E+ + L+ L +++DA H ++ E+ + + + +L Sbjct: 155 LLYDTKGLPEETWQVLRKKAPLRGVVVDATYPPGFNDPYHNNVDEAAEIGLQL-AERTVL 213 Query: 238 THMHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 +H+ +L + + V K ++V+ A+DGM F Sbjct: 214 SHISHKNLPFLELVEYVRKRWGNKVLVAYDGMVF 247 >gi|295113177|emb|CBL31814.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Enterococcus sp. 7L76] Length = 276 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R Y ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLYYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHILLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYTEMAALSQKHEIITSYDGLEI 274 >gi|332158416|ref|YP_004423695.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] gi|331033879|gb|AEC51691.1| hypothetical protein PNA2_0775 [Pyrococcus sp. NA2] Length = 257 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 98/273 (35%), Gaps = 37/273 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 ILG G+ G P+ + C KN RRTR S+ I +++D Sbjct: 1 MRVMILGSGSYSGTPKPLCNCENCSRAR-KNPTFRRTRFSVYIE--------GGILIDPS 51 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD + + R + VL TH H DHI GI L+ + + + + + ++ Sbjct: 52 PDLHYHLERID-SEVKLVLITHAHFDHIFGIPDLQVF-----KRLKIASNKLGIETAKAL 105 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 R F + Y E ++ + ++ + H S GF Sbjct: 106 ARLAFNDEMPKGY-------EWEYIELEFFKEYKFDDVKVMHFPVPHSIEMSGGFLIEIN 158 Query: 180 --NVAYCTDV-NAFPA--ESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELINPK 233 +A D E +E +++ D LI + +H +++++ +L+ PK Sbjct: 159 NKRIAVTGDTGPEILDRKEIIELIKDSDLLISEMTHKTSIPGTHLGVNDAITLAKLVRPK 218 Query: 234 NAILTHMHVD-LDYDMVLKSTPS---RVVPAFD 262 I H+ ++++ + A D Sbjct: 219 YTIFAHISHSNYPHEILERKVREAGINGEVARD 251 >gi|257090129|ref|ZP_05584490.1| predicted protein [Enterococcus faecalis CH188] gi|312903567|ref|ZP_07762747.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|256998941|gb|EEU85461.1| predicted protein [Enterococcus faecalis CH188] gi|310633443|gb|EFQ16726.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|315162881|gb|EFU06898.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315577879|gb|EFU90070.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 276 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 107/284 (37%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R I+ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLQYQIIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|315149772|gb|EFT93788.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 276 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY F Sbjct: 61 QYDLCFAEFDSLLISHWHSDHFYGEDLAYRMSGYALDVPNRLTVYGNEAVKTFYQRVFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + + R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDNTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|229545575|ref|ZP_04434300.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255975608|ref|ZP_05426194.1| predicted protein [Enterococcus faecalis T2] gi|256619305|ref|ZP_05476151.1| predicted protein [Enterococcus faecalis ATCC 4200] gi|256853365|ref|ZP_05558735.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256964882|ref|ZP_05569053.1| predicted protein [Enterococcus faecalis HIP11704] gi|307272973|ref|ZP_07554220.1| hypothetical protein HMPREF9514_01739 [Enterococcus faecalis TX0855] gi|307275725|ref|ZP_07556865.1| hypothetical protein HMPREF9521_01354 [Enterococcus faecalis TX2134] gi|307277819|ref|ZP_07558903.1| hypothetical protein HMPREF9515_00153 [Enterococcus faecalis TX0860] gi|307291746|ref|ZP_07571618.1| hypothetical protein HMPREF9509_02045 [Enterococcus faecalis TX0411] gi|229309315|gb|EEN75302.1| beta-lactamase domain protein [Enterococcus faecalis TX1322] gi|255968480|gb|EET99102.1| predicted protein [Enterococcus faecalis T2] gi|256598832|gb|EEU18008.1| predicted protein [Enterococcus faecalis ATCC 4200] gi|256711824|gb|EEU26862.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256955378|gb|EEU72010.1| predicted protein [Enterococcus faecalis HIP11704] gi|306497198|gb|EFM66743.1| hypothetical protein HMPREF9509_02045 [Enterococcus faecalis TX0411] gi|306505216|gb|EFM74402.1| hypothetical protein HMPREF9515_00153 [Enterococcus faecalis TX0860] gi|306507601|gb|EFM76731.1| hypothetical protein HMPREF9521_01354 [Enterococcus faecalis TX2134] gi|306510587|gb|EFM79610.1| hypothetical protein HMPREF9514_01739 [Enterococcus faecalis TX0855] gi|315029453|gb|EFT41385.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315032061|gb|EFT43993.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315144911|gb|EFT88927.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 276 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLQYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|29376360|ref|NP_815514.1| hypothetical protein EF1816 [Enterococcus faecalis V583] gi|227519004|ref|ZP_03949053.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|256961686|ref|ZP_05565857.1| predicted protein [Enterococcus faecalis Merz96] gi|257082315|ref|ZP_05576676.1| hypothetical protein EFJG_00759 [Enterococcus faecalis E1Sol] gi|257084930|ref|ZP_05579291.1| predicted protein [Enterococcus faecalis Fly1] gi|293383391|ref|ZP_06629304.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293388956|ref|ZP_06633441.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|307289356|ref|ZP_07569311.1| hypothetical protein HMPREF9505_02726 [Enterococcus faecalis TX0109] gi|312901776|ref|ZP_07761044.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312907781|ref|ZP_07766772.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910399|ref|ZP_07769246.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|29343823|gb|AAO81584.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|227073576|gb|EEI11539.1| beta-lactamase domain protein [Enterococcus faecalis TX0104] gi|256952182|gb|EEU68814.1| predicted protein [Enterococcus faecalis Merz96] gi|256990345|gb|EEU77647.1| hypothetical protein EFJG_00759 [Enterococcus faecalis E1Sol] gi|256992960|gb|EEU80262.1| predicted protein [Enterococcus faecalis Fly1] gi|291079182|gb|EFE16546.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081737|gb|EFE18700.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|306499723|gb|EFM69085.1| hypothetical protein HMPREF9505_02726 [Enterococcus faecalis TX0109] gi|310626809|gb|EFQ10092.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311289672|gb|EFQ68228.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311291111|gb|EFQ69667.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315163756|gb|EFU07773.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315575975|gb|EFU88166.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315580765|gb|EFU92956.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|323480970|gb|ADX80409.1| Lactamase_B super family protein [Enterococcus faecalis 62] gi|327535377|gb|AEA94211.1| hypothetical protein OG1RF_11524 [Enterococcus faecalis OG1RF] Length = 276 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|315167410|gb|EFU11427.1| conserved hypothetical protein [Enterococcus faecalis TX1341] Length = 276 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPRDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|256762797|ref|ZP_05503377.1| predicted protein [Enterococcus faecalis T3] gi|256684048|gb|EEU23743.1| predicted protein [Enterococcus faecalis T3] gi|315173529|gb|EFU17546.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 276 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|300897506|ref|ZP_07115921.1| phosphonate metabolism protein PhnP [Escherichia coli MS 198-1] gi|300358727|gb|EFJ74597.1| phosphonate metabolism protein PhnP [Escherichia coli MS 198-1] Length = 209 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 30/219 (13%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G + R S L TH H DH+ G+ LR I +Y PD Sbjct: 9 LIDAG--LHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLR---WGVGDSIPIYGPPD--- 60 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + FK + + P V+ G ++ P+ H ++ + G+ Sbjct: 61 --EQGCDDLFKHPGLLDFSHTMEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGY 107 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKI 227 VA+ +D P ++L+ L+N ++ID + +H L+ L Sbjct: 108 LLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRNHCDLNTVLALN 167 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 E+I ILTH+ D ++ + PS FDGM+ Sbjct: 168 EVIRSPRVILTHISHQFDAWLMENALPSGFEAGFDGMEI 206 >gi|257419538|ref|ZP_05596532.1| predicted protein [Enterococcus faecalis T11] gi|257161366|gb|EEU91326.1| predicted protein [Enterococcus faecalis T11] Length = 276 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRFHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHILLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|315027970|gb|EFT39902.1| conserved hypothetical protein [Enterococcus faecalis TX2137] Length = 276 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY SF Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRSFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLITELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|257416332|ref|ZP_05593326.1| predicted protein [Enterococcus faecalis AR01/DG] gi|257158160|gb|EEU88120.1| predicted protein [Enterococcus faecalis ARO1/DG] Length = 276 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F ++ E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSDMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|229549765|ref|ZP_04438490.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255972494|ref|ZP_05423080.1| predicted protein [Enterococcus faecalis T1] gi|312950924|ref|ZP_07769834.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229305034|gb|EEN71030.1| beta-lactamase domain protein [Enterococcus faecalis ATCC 29200] gi|255963512|gb|EET95988.1| predicted protein [Enterococcus faecalis T1] gi|310631073|gb|EFQ14356.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315152233|gb|EFT96249.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315159811|gb|EFU03828.1| conserved hypothetical protein [Enterococcus faecalis TX0312] Length = 276 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQV--LSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLITELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|33359267|ref|NP_142252.2| hypothetical protein PH0260 [Pyrococcus horikoshii OT3] Length = 262 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 35/251 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ C NP RRTR S+ I +++D GP Sbjct: 6 MKVIILGSGSYSGTPKPLCTCENCTRARINPAFRRTRFSVYIE--------GGILIDPGP 57 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + + + ++ +L TH H DHI G+ + + + + + + P +K Sbjct: 58 DLHYHLEKLN-KEVETILITHAHFDHIFGLPDAQVF-----KKLTIASNPLGIKVARSLA 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 F + + ++ + ++ I H + GF Sbjct: 112 MLAFNSE-------APLGNDWDYVELKFWNEYKVNGVKVIHFPVVHSIEMAGGFLIERKN 164 Query: 181 --VAYCTDVNAFPA-----ESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELINP 232 VA D P E ++ ++ D LI + +H ++++++ +++ Sbjct: 165 KTVAITGDTG--PEIIRDSEVIDLIKGSDLLISEMTHKESIPKTHLGVNDAIELAKIVKA 222 Query: 233 KNAILTHMHVD 243 + + H+ Sbjct: 223 EQTVFAHISHS 233 >gi|291086652|ref|ZP_06356354.2| phosphonate metabolism protein PhnP [Citrobacter youngae ATCC 29220] gi|291067342|gb|EFE05451.1| phosphonate metabolism protein PhnP [Citrobacter youngae ATCC 29220] Length = 210 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 83/224 (37%), Gaps = 30/224 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +N ++D G + S L TH H DH+ G+ LR I VY Sbjct: 5 NNAVTLLDAG--IPHLMDDWPAGSFQQFLLTHYHMDHVQGLFPLR---WGVGAAIPVYGP 59 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 PD + FK + V P V+ ++ P+ H ++ Sbjct: 60 PD-----EQGCDDLFKHPGILDFSHTVAPFVV----------FDLQGLQVTPLPLNHSKL 104 Query: 172 SSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSE 222 + G+ F VA+ +D P ++L+ L N +IID + +H ++ Sbjct: 105 -TFGYLFETAHSRVAWLSDTAGLPDKTLKFLHNNQPQVIIIDCSHAPRAEPPRNHCDVNT 163 Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + E+I ILTH+ D ++ PS +DGM+ Sbjct: 164 VIALNEVIRCPRVILTHISHQFDQWLMENPLPSGFEAGYDGMEI 207 >gi|3256649|dbj|BAA29332.1| 257aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 257 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 35/251 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ C NP RRTR S+ I +++D GP Sbjct: 1 MKVIILGSGSYSGTPKPLCTCENCTRARINPAFRRTRFSVYIE--------GGILIDPGP 52 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + + + ++ +L TH H DHI G+ + + + + + + P +K Sbjct: 53 DLHYHLEKLN-KEVETILITHAHFDHIFGLPDAQVF-----KKLTIASNPLGIKVARSLA 106 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-- 180 F + + ++ + ++ I H + GF Sbjct: 107 MLAFNSE-------APLGNDWDYVELKFWNEYKVNGVKVIHFPVVHSIEMAGGFLIERKN 159 Query: 181 --VAYCTDVNAFPA-----ESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELINP 232 VA D P E ++ ++ D LI + +H ++++++ +++ Sbjct: 160 KTVAITGDTG--PEIIRDSEVIDLIKGSDLLISEMTHKESIPKTHLGVNDAIELAKIVKA 217 Query: 233 KNAILTHMHVD 243 + + H+ Sbjct: 218 EQTVFAHISHS 228 >gi|323162477|gb|EFZ48328.1| phosphonate metabolism protein PhnP [Escherichia coli E128010] Length = 221 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 90/243 (37%), Gaps = 35/243 (14%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 P+ RR S + ++ ++D G + R S L TH H DH+ G+ Sbjct: 2 PQYRRQPCSGVVKF-----NDAITLIDAG--LHDLADRWSPGSFQQFLLTHYHMDHVQGL 54 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 LR PI VY PD + FK + V P V+ Sbjct: 55 FPLR---WGVGDPIPVYGPPD-----DQGCDDLFKHPGLLDFSHTVEPFVV--------- 97 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLII 206 ++ P+ H ++ + G+ VA+ +D P ++ + L N ++I Sbjct: 98 -FDLQGLQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTAGLPEKTQKFLLNNHPQVMVI 155 Query: 207 DAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 D + +H L+ L ++I+ ILTH+ D ++ + P FDG Sbjct: 156 DCSHPPREDAPRNHCDLNTVLALNQVIHSPRVILTHISHQFDAWLMENALPPGFEAGFDG 215 Query: 264 MQF 266 M+ Sbjct: 216 MEI 218 >gi|315169490|gb|EFU13507.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 276 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDVLLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMGALSQKHEIITSYDGLEI 274 >gi|227355012|ref|ZP_03839423.1| carbon-phosphorus lyase complex accessory protein [Proteus mirabilis ATCC 29906] gi|227164799|gb|EEI49646.1| carbon-phosphorus lyase complex accessory protein [Proteus mirabilis ATCC 29906] Length = 273 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 99/293 (33%), Gaps = 50/293 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG AS G+P C K+ RT SS + + +++D Sbjct: 1 MKLHFLGTAASEGIPNPFCRCEHCLKARKLAGKDIRTHSSAIVDDI--------MLIDVS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIH-G--IDGLRGYFLKQKRPIDVYAAPDCMK 116 P F Q++R+ + +++L+TH H DH + G + GY K P+ ++ + Sbjct: 53 PTFSYQLMRDGMDATHFESLLFTHTHPDHFNVGELFSRMEGYGFKINHPLHIFGNDRAIN 112 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLG 175 E P + +P G + P+L H + Sbjct: 113 GCIE------------VLPGYTKERFAFHCLIPFVTVERNGY-KITPLLANHAKWELCYV 159 Query: 176 FRFGNVA----YCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLK 225 + Y D FP + + L+N LD ++ + +H SL Sbjct: 160 YHIEKDGKAIFYGHDSGWFPELTWQWLENKPLDIVVFECTYGLNGKDRTDNHMSLETVFA 219 Query: 226 KIELI-------NPKNAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 E + +++H+ L +++ P + A+DG+ + Sbjct: 220 AKEKLQQQGCLHQATQIVVSHISHSGKLLHHELETVCAPHHIRVAYDGLTLET 272 >gi|27362883|gb|AAN86996.1| PhnP-like protein [Pectobacterium carotovorum subsp. carotovorum] Length = 195 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 29/199 (14%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 +L TH H DH+ G+ LR + PI V+ PD FK + P Sbjct: 14 HILLTHYHMDHVQGLFPLRWGY---GDPIPVFGPPD-----EAGCDDLFKHPGILHFQPP 65 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAE 193 + P P + I P+ H ++ + G+ +AY TD P E Sbjct: 66 LIPF------QPFELDG----ISITPVPLIHSKL-TYGYLIQTPMHTLAYLTDTVGLPPE 114 Query: 194 SLEKL--QNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 +++ L +LD+ I+D + +H ++ +L+ +NPK LTH+ +LD + Sbjct: 115 TVQFLASHSLDYAIVDFSHPPQTTPPRNHNDITRALEIFTQLNPKQLYLTHIGHELDRWL 174 Query: 249 VLKS-TPSRVVPAFDGMQF 266 ++ P V A+DG+ Sbjct: 175 QTQTLLPENVHAAYDGLVL 193 >gi|330861992|emb|CBX72160.1| protein phnP [Yersinia enterocolitica W22703] Length = 206 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/227 (24%), Positives = 85/227 (37%), Gaps = 37/227 (16%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G Q+ I L TH H DH+ G+ LR I VY PD Sbjct: 1 MIDAGLPALDQLFAGG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNAIPVYGPPD--- 52 Query: 117 HLFESFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + +K + PP+ I+ G + P+ H +I + G Sbjct: 53 --PDGCDDLYKHPGILAFQPPLSAFHPIQ-----------FGDLRVTPVPLNHSKI-TFG 98 Query: 176 FRFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLH--------SSHFSLS 221 + + +AY TD PA+S L +N+D LI D H +H ++ Sbjct: 99 YLLQSPNRTIAYLTDTIGLPADSALFLASKNIDLLIQDCSHPPHHFSPHRPPPRNHNDVT 158 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +L EL+ P +LTH+ LD + + P + A D S Sbjct: 159 MALAISELLKPAATLLTHISHQLDTWALDNTLPDGITIAQDNQIISL 205 >gi|315231026|ref|YP_004071462.1| metal-dependent hydrolase [Thermococcus barophilus MP] gi|315184054|gb|ADT84239.1| metal-dependent hydrolase [Thermococcus barophilus MP] Length = 248 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 102/276 (36%), Gaps = 48/276 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G S G+P C+ +R S+L + +N +++D G D Sbjct: 5 FIGTGGSEGIPAHLCTCRTCEEARRLGFAQRKPSTLAVITK----NNEAILIDVGTDIRD 60 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 +L + A+L TH H DHI+G+ LR + ++YA L + Sbjct: 61 -LLHVPLK---AILLTHWHHDHIYGLYKLRWIA----QETELYAPEGHADALILN----- 107 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + P I+ DV ++ + H I +LGF A Sbjct: 108 -------DPKNLKPKTIKAGDV-----LKIDSLKITALKLNH-EIETLGFLIEEDGKRFA 154 Query: 183 YCTDVNAFPAESLEKL--QNLDFLIIDALKNGLH---SSHFSLSESLKKIELINPKNAIL 237 D P E++ L ++ D ++DA H ++ E + I + L Sbjct: 155 LLYDTKGIPPETMAILREKSPDVAVVDAT-YAPGVNDPYHNNVDEGAEVGSEI-AEEVYL 212 Query: 238 THMHV-DLDY----DMVLKSTPSRVVPAFDGMQFSS 268 +H+ ++ + V K S+V A+DG+ + Sbjct: 213 SHISHKNMPFLQLLAYVKKRYGSKVRVAYDGLIVNI 248 >gi|18978300|ref|NP_579657.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] gi|18894124|gb|AAL82052.1| ATP-binding protein phnp [Pyrococcus furiosus DSM 3638] Length = 258 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 94/274 (34%), Gaps = 38/274 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ + C NP RRTR SL I ++VD P Sbjct: 1 MKVVILGSGSYSGTPKPLCNCENCSIARRNPAFRRTRFSLYIE-------EGKILVDPSP 53 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFE 120 D + + R ++ V TH H DHI G+ L+ Y + + + K L Sbjct: 54 DLHYHLERLN-KKVENVFITHAHFDHIFGVPDLQVYKKLIISSNTLGI----KVAKELSR 108 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 F + Y ++ + + I H + G+ F Sbjct: 109 L---AFGSEVPSGY-------EWRYEELQFWNEYSFDNFRVIHFPVIHSLEIAGGYLFEI 158 Query: 180 ---NVAYCTDV-NAF--PAESLEKLQNLDFLIIDALKNGLHSS-HFSLSESLKKIELINP 232 + D + + L+ +D LI++ K H +S+S++ +++ Sbjct: 159 KGRRIGVTGDTGPEILKDEKVKKLLEGVDILIVEMTKRESIPGVHLGVSDSIEFAKVVGA 218 Query: 233 KNAILTHMHVD-LDYDMVLKSTPS-RV--VPAFD 262 + H+ ++++ K V A D Sbjct: 219 SYTVFAHISHTNYSHEVLEKRVRESGVQGEVARD 252 >gi|242399039|ref|YP_002994463.1| Phosphonate matabolism protein PhnP like protein, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] gi|242265432|gb|ACS90114.1| Phosphonate matabolism protein PhnP like protein, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] Length = 252 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 105/281 (37%), Gaps = 46/281 (16%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIV 58 M +G G S G+P C+ +R S+L I +N V++ Sbjct: 1 MVRILIIYFIGTGGSEGIPAHLCTCETCEEARKLGFAQRKPSTLAIITK----NNKAVLI 56 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D G D + + ++A+L TH H DHI+G+ LR + +YA L Sbjct: 57 DVGTDIRDLLH----VPLEAILLTHWHHDHIYGLYKLRWIA----KRTILYAPNGDADWL 108 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 I +P IE + ++ + H ++ +LG+ Sbjct: 109 M-----------------INDPKNIEVKFIKAGDVLNIDSLKITALKLNH-QVETLGYLI 150 Query: 179 G----NVAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGL--HSSHFSLSESLKKIELI 230 VA D P E+ E L + L +I DA + H ++ E + + Sbjct: 151 EEDDKRVAVLYDTKGLPEETFEILKEKKLRLVISDATYSPEINDPYHNNVDEGAETGLKL 210 Query: 231 NPKNAILTHMHV-DLDY----DMVLKSTPSRVVPAFDGMQF 266 + +L+H+ +L + + V + +V+ A+DGM F Sbjct: 211 -AERTLLSHISHKNLPFLKLEEYVRRKYNGKVLVAYDGMLF 250 >gi|330951964|gb|EGH52224.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae Cit 7] Length = 192 Score = 122 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 30/208 (14%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R S+ +L TH HADH G+ LR Q I V+ D + L + +++ Sbjct: 4 RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPAD-PEGLADLYKH----- 54 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCT 185 P I++ + + A G ++ + H + + G+ F AY T Sbjct: 55 -----PGILDF----SQPFAAFERRALGALQVTALPLAHSK-PTFGYLFEGDGQRFAYLT 104 Query: 186 DVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 D P ++ E LQ LD L++D + +H L+ +L+ IE + P A+LTH+ Sbjct: 105 DTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIECLRPGRAVLTHV 164 Query: 241 HVDLDYDMVLK--STPSRVVPAFDGMQF 266 LD ++ + P +V D M Sbjct: 165 GHTLDAWLMGRAGQLPDQVFVGQDRMIL 192 >gi|242398194|ref|YP_002993618.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] gi|242264587|gb|ACS89269.1| metallo-beta-lactamase superfamily protein [Thermococcus sibiricus MM 739] Length = 260 Score = 122 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 94/282 (33%), Gaps = 49/282 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG G+ G P+ + C P+ RRTR S+ I ++D Sbjct: 8 KKMRVILLGSGSYSGTPKALCECENCSRARRFPQYRRTRFSMYI-------PQINALIDP 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPIDVYAAPDCMK 116 PD Y + I+ V THPH DHI G+ L+ + F K+ +D+ K Sbjct: 61 SPDLYYHMSYLN-ERIENVFITHPHFDHIGGLPELQVFKKVRFYSHKKILDL------AK 113 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 HL E+F + E + G + H G Sbjct: 114 HLQETF---------------LGIREWEYVSLEFNRWYDFGKFKVKQFPVVHQPGDVAGG 158 Query: 176 ----FRFGNVAYCTDVNAFPA-----ESLEKLQNLDFLIIDAL-KNGLHSSHFSLSESLK 225 + + D P E LE+++ D L+ + K + +H + +++K Sbjct: 159 FILEVKGKRIVITGDTG--PEILRNHELLEEIRGADLLVSEMTHKYSIPKTHLGVEDAIK 216 Query: 226 KIELINPKNAILTHMHVD-LDYDMVLKSTPSRVVPAFDGMQF 266 + + + H+ + + + + D M Sbjct: 217 FAQKVEANKTLFVHISHSNYTQEELEEKVGENGMVGRDFMVL 258 >gi|148978687|ref|ZP_01815090.1| carbon-phosphorus lyase complex accessory protein [Vibrionales bacterium SWAT-3] gi|145962225|gb|EDK27508.1| carbon-phosphorus lyase complex accessory protein [Vibrionales bacterium SWAT-3] Length = 255 Score = 122 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 89/256 (34%), Gaps = 43/256 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDT-G 61 +LG S VP D C NP RR +SS + + +++D Sbjct: 1 MKLIMLGTANSAMVPVYGCDCSVCVSAFENPSLRREKSSAFLEH-----NGKFLLLDANA 55 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD + R SID +L TH H DH+ + LR I V + D Sbjct: 56 PDL---MHRFPAGSIDQILLTHYHMDHVQSLFDLR---WGVGDKISVISPDD-------- 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 D +P I+ + I P+ H ++ LG+ F Sbjct: 102 ---PLGCDDLYKHPGILGFSQRAQAFKSFDWQG----ITVTPLPLNHSKL-CLGYCFELD 153 Query: 180 --NVAYCTDVNAFPAESLEKLQ--NLDFLIIDA-------LKNGLHSSHFSLSESLKKIE 228 +AY TD P ++ L+ +D+LI D + +S+H L E Sbjct: 154 GKRLAYLTDTVGLPKQTERWLKEFPVDWLITDCNYPPIEDPQVRSNSNHNDFHHILDIDE 213 Query: 229 LINPKNAILTHMHVDL 244 PKN L H+ + Sbjct: 214 TCRPKNLGLIHVSHHM 229 >gi|307140787|ref|ZP_07500143.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli H736] gi|331644840|ref|ZP_08345957.1| phosphonate metabolism protein PhnP [Escherichia coli H736] gi|331035815|gb|EGI08053.1| phosphonate metabolism protein PhnP [Escherichia coli H736] Length = 208 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 30/219 (13%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G + R S L TH H H+ G+ LR PI VY PD Sbjct: 8 LIDAG--LHDLADRWSPGSFQQFLLTHYHMVHVQGLFPLR---WGVGDPIPVYGPPD--- 59 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + FK + V P V+ G ++ P+ H ++ + G+ Sbjct: 60 --EQGCDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQVTPLPLNHSKL-TFGY 106 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKI 227 VA+ +D P ++L+ L+N +++D + +H L+ L Sbjct: 107 LLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALN 166 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++I ILTH+ D ++ + PS FDGM+ Sbjct: 167 QVIRSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEI 205 >gi|197286797|ref|YP_002152669.1| hypothetical protein PMI2968 [Proteus mirabilis HI4320] gi|194684284|emb|CAR45839.1| conserved hypothetical protein [Proteus mirabilis HI4320] Length = 273 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 100/293 (34%), Gaps = 50/293 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG AS G+P C K+ RT SS + + +++D Sbjct: 1 MKLHFLGTAASEGIPNPFCRCEHCLKARKLAGKDIRTHSSAIVDDI--------MLIDVS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIH-G--IDGLRGYFLKQKRPIDVYAAPDCMK 116 P F Q++R+ + +++L+TH H DH + G + GY + P+ ++ + Sbjct: 53 PTFSYQLMRDGMDATHFESLLFTHTHPDHFNVGELFSRMEGYGFEINHPLHIFGNDRAIN 112 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLG 175 E P + +P G + P+L H + Sbjct: 113 GCIE------------VLPGYTKERFAFHCLIPFVTVERNGY-KITPLLANHAKWELCYV 159 Query: 176 FRFGNVA----YCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLK 225 + Y D FPA + + L+N LD ++ + +H SL Sbjct: 160 YHIEKDGKAIFYGHDSGWFPALTWQWLENKPLDIVVFECTYGLNGKDRTDNHMSLETVFA 219 Query: 226 KIELI-------NPKNAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 E + +++H+ L +++ P + A+DG+ + Sbjct: 220 AKEKLQQQGCLHQATQIVVSHISHSGKLLHHELETVCAPHHIRVAYDGLTLET 272 >gi|308274992|emb|CBX31591.1| hypothetical protein N47_E51030 [uncultured Desulfobacterium sp.] Length = 295 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 107/304 (35%), Gaps = 58/304 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIV 58 TILG G + +P+ C NR RT S+ I ++ +++ Sbjct: 12 KRMDITILGSGGCMTIPKPLCRCRVCTQARE-NRGPYQRTGPSVFI-------NDEKILI 63 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI-------DGLRGYFLKQKRPIDVYAA 111 DT + Q+ R + I+ +L+TH DHI G R + + + + + Sbjct: 64 DTPAEISYQLNRSGIEKINYLLFTHLDPDHIEGFRVVEQITLDFRTWRAYEGKCVKLVLP 123 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND--VPICMKSAGGVIEAIPILQQHG 169 + L + + Y P+++ + + G I+ I G Sbjct: 124 EELFVRLEK---------INSCYGPVIDFYHSSGFVDCISYSNSISLGSIKITAIPVDRG 174 Query: 170 RISSLGFRFG----NVAYCT-DVNAFPAESLEKLQNLDFLII------DALKNGL----- 213 + + + Y D+ FP E L + D L+I + LK+ Sbjct: 175 NQLAFIYVIEKNSQKMVYAPCDIKPFPENRKEVL-DADLLVIQPGIFENGLKHDFKYPDD 233 Query: 214 HSSH---FSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGM 264 H S ++ E+L + I + TH+ D DY + K V A+DG+ Sbjct: 234 HISRTTLYTFEETLGLAKRIYANKVLFTHIEEYWNRSYD-DYKKLEKQF-DNVRFAYDGL 291 Query: 265 QFSS 268 Q S Sbjct: 292 QISI 295 >gi|315229788|ref|YP_004070224.1| metal-dependent hydrolase [Thermococcus barophilus MP] gi|315182816|gb|ADT83001.1| metal-dependent hydrolase [Thermococcus barophilus MP] Length = 259 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 94/273 (34%), Gaps = 45/273 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G AS G+P C +R +L + ++ D G D Sbjct: 15 FIGTAASEGIPNPLCKCSTCQEARKFAFAQRKPPTLAVILK----KGGIILFDVGSDIGE 70 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + +SI V TH H DH +G+ LR + + +YA + + Sbjct: 71 HL---PGVSIRTVFLTHWHNDHTYGLYKLR----WVAKKLSLYAPREGADATILN----- 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVA 182 P +E + ++ + H +LG+ + VA Sbjct: 119 ------------EPRNLEIQFIKAGDTIKLPPLKITALKLNHFP-ETLGYLLESKKKKVA 165 Query: 183 YCTDVNAFPAESLEKL--QNLDFLIIDALKNG--LHSSHFSLSESLKKIELINPKNAILT 238 D P E+ E L + ++DA +H ++ E+ + L + LT Sbjct: 166 ILYDTKGLPEETYELLKKKKPKVALVDATYPPGVEMPTHNNVDEA-AVLGLSVAEKVYLT 224 Query: 239 HM-HVDLDY----DMVLKSTPSRVVPAFDGMQF 266 H+ H +L + + V++ +V A+DGM Sbjct: 225 HIAHHNLPFTKLLEYVIEKYGEKVNVAYDGMVV 257 >gi|323143630|ref|ZP_08078304.1| hypothetical protein HMPREF9444_00933 [Succinatimonas hippei YIT 12066] gi|322416563|gb|EFY07223.1| hypothetical protein HMPREF9444_00933 [Succinatimonas hippei YIT 12066] Length = 272 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 104/291 (35%), Gaps = 50/291 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK---NRRTRSSLKISRVSERGSNTTVIVDTG 61 +G AS G+P + C N RTR+S + + +++D Sbjct: 1 MQVKFMGTAASEGIPNPFCNCKVCTYAREHGGANVRTRASAMV--------DNHILIDMS 52 Query: 62 PDFYMQVLREQV--LSIDAVLYTHPHADHIH-G--IDGLRGYFLKQKRPIDVYAAPDCMK 116 P++ Q+ RE + ID VL+TH H DH + G + G+ + P+ ++ +K Sbjct: 53 PEWSAQLKRENMTAREIDTVLFTHTHPDHFNVGEFVSRTVGFAQNVEFPLHIFGNDCAIK 112 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLG 175 F ALD + V + + G I P L H ++ Sbjct: 113 G-------AFNALDGLQG----DRFVFHLIAPYLTYEHEGYKIT--PTLANHAKMELCYN 159 Query: 176 FRFGN----VAYCTDVNAFPAESLEKLQN--LDFLIIDAL----KNGLHSSHFSLSESLK 225 + Y D P + E L+ +D +++ ++H + + Sbjct: 160 YLIEKDGKTFFYGLDSGWLPDSTFEFLKGRKIDVAVLECTYAFRDGEKTNNHLNFNSLFA 219 Query: 226 KIELINP-------KNAILTHMHVD--LDYDMVLKSTPSR-VVPAFDGMQF 266 ++ L+ I +H+ L++D + K + AFDGM Sbjct: 220 EVALLKELGCLTESSRVITSHVSHSSTLNHDELCKLMDEHDITTAFDGMVL 270 >gi|218193392|gb|EEC75819.1| hypothetical protein OsI_12782 [Oryza sativa Indica Group] Length = 306 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 104/320 (32%), Gaps = 84/320 (26%) Query: 4 YYHFTILGCGASLGVPRITG--------DWGACD------PTNPKN---------RRTRS 40 LG G S VP C P N +R + Sbjct: 10 SSSLIFLGTGCSTVVPDTRCLIRPSSTPPCPICSQALSLPPHRNPNYRCTQSLALKRCNT 69 Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV--------------------- 79 SL I G+++ Q+ + S+ V Sbjct: 70 SLFIDYCDNDGTHSQ--------QPSQMWLAALQSVSCVEAWLRCWLTLPNSVLSVLQFL 121 Query: 80 -LYTHPHADHIHGIDGLRGY----FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + TH HAD I G+D + + V+ M + D+ + Sbjct: 122 IIPTHEHADAILGLDDVWMIRPSDGRNDFGQVPVFLTKFTMDS---KIPLLCEG-DEASQ 177 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGNVAYCTDVNAFPAE 193 ++ +IE D+ S+G +E +P+ HG LGF + +A A Sbjct: 178 VAQLDWRIIEG-DIEKPFISSG--LEFVPLPVMHGEGYVCLGFPIWEI--MPSFHA--AI 230 Query: 194 SLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 S LD LI++A N LH E+L ++ I+PK A+LT M ++ Y ++ Sbjct: 231 SKSGAGQLDLLILEA--NSLH------GEALDAVKRISPKRALLTGMAHEIKYCKENQNL 282 Query: 254 PSR-------VVPAFDGMQF 266 V A DG++ Sbjct: 283 AEWSSREGIPVQLAHDGLRV 302 >gi|323969849|gb|EGB65129.1| phosphonate metabolism protein PhnP [Escherichia coli TA007] Length = 182 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 28/196 (14%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 L TH H DH+ G+ LR PI VY PD + FK + V Sbjct: 3 LLTHYHMDHVQGLFPLR---WGVGDPIPVYGPPD-----EQGCDDLFKHPGLLDFSHTVE 54 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESL 195 P V+ ++ P+ H ++ + G+ VA+ +D P ++L Sbjct: 55 PFVV----------FDLQGLQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTAGLPEKTL 103 Query: 196 EKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + L+N +++D + +H L+ L ++I ILTH+ D ++ Sbjct: 104 KFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLME 163 Query: 251 KSTPSRVVPAFDGMQF 266 + PS FDGM+ Sbjct: 164 NALPSGFEVGFDGMEI 179 >gi|281356677|ref|ZP_06243168.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281316804|gb|EFB00827.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 299 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 45/292 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN---PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG GAS G+P G C +N R R++ ++ T+ +D G Sbjct: 22 SELLVLGSGASEGMPSQYCVCGFCRRARTEGGRNYRFRTAFQL--------GETIRIDWG 73 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKH 117 PD Q R ++ + V TH H DH+ +D L ++ + VY + Sbjct: 74 PDAVAQAFRFRLEPWKLRHVFITHSHEDHLFPMDFWVRGVSQLPEESWVTVYGNRQVLAA 133 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGF 176 + P++ + ++ G + P+ H SL + Sbjct: 134 IGRMIG---GDWKKNRLTPVLA-------EPGKTIELPGENLRVTPLAANHTSPEQSLMY 183 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDF--LIIDAL--KNGLHSSHFSLSESLKKIE 228 F + D + FP S + L++ + +DA H SH + ++ + Sbjct: 184 AFEAPRWKLLVTGDTDVFPEASWKFLKDFKLTAVTVDATWGMEDRHESHLGIPNVVELAK 243 Query: 229 LINP-------KNAILTHMHVDLD---YDMVLKST-PSRVVPAFDGMQFSSP 269 + + H + + + P + P++DGM+ Sbjct: 244 RLRSVGAADGRTRIVPVHFAHGKGARLHSELEQILMPLGMEPSYDGMRIQLE 295 >gi|90411475|ref|ZP_01219486.1| PhnP protein [Photobacterium profundum 3TCK] gi|90327688|gb|EAS44031.1| PhnP protein [Photobacterium profundum 3TCK] Length = 255 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 86/262 (32%), Gaps = 41/262 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + +P ACD RR ++S I +++D Sbjct: 1 MKLTLLGTGNAGMLPVYGCTCQACDRAQHTLSYRRKKTSAVIEHQG-----KQLLLDANA 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + R SID +L TH H DH+H + LR + PI V D + Sbjct: 56 DDL--LTRFPAGSIDRILLTHYHMDHVHSLFDLR---WGEGTPIRVDGPDD-----PQGC 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 FK + P + + I P+ H ++ G+ F Sbjct: 106 DDLFKHPGLLVFRPPLTAFK----------AFSWQGITITPLPMNHSKV-CFGYCFEWQG 154 Query: 180 -NVAYCTDVNAFPAESLEKL--QNLDFLIIDALKN-------GLHSSHFSLSESLKKIEL 229 +AY TD + L ++ ++ID +H + Sbjct: 155 RRIAYLTDTLGLREDVTAWLVANPIEMMLIDCSFPPSSSREGRPPVNHNDTDTVRIIQQE 214 Query: 230 INPKNAILTHMHVDLDYDMVLK 251 +PK L H+ DL+ + Sbjct: 215 CHPKKMGLIHVGHDLESWAMDN 236 >gi|302386696|ref|YP_003822518.1| hypothetical protein Closa_2322 [Clostridium saccharolyticum WM1] gi|302197324|gb|ADL04895.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 278 Score = 117 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 100/294 (34%), Gaps = 47/294 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG GA+ G+P + C K+ RTR+S + N +++D Sbjct: 1 MEIRYLGTGAAEGIPAVFCQCETCRKAAKQKGKDIRTRASTLV--------NGKLLLDIS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHI--HGIDGLRGYFLKQ---KRPIDVYAAPDC 114 PD Y L + + AV TH H+DH + +RP+ VY Sbjct: 53 PDLYFHKLCYDLDLWKLKAVCVTHSHSDHFDSQELTRRSSANYCHIHSERPLTVYGNSKV 112 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISS 173 + ESF+ F +D + ++ P + + IPI H R Sbjct: 113 CRMGRESFKEEFGKEEDPSVVFLLA--------QPFS-EIRMEELTVIPIPANHDPREMC 163 Query: 174 LGFRFGN----VAYCTDVNAFPAESLEKLQN--LDFLIIDA---LKNGLHSSHFSLSESL 224 + + Y D +E + L+ L + +D +H + E+L Sbjct: 164 FIYLIEEGETLILYANDTGLLGSEVYDFLKGKRLSLVSLDCTFGFNKYHGGTHMGIEENL 223 Query: 225 KKIEL------INPKNAIL-THMHV--DLDYDMVLKSTPS-RVVPAFDGMQFSS 268 ++ + P I TH ++ + + + + A+DGM Sbjct: 224 AVVKHLEEAGCLTPSTVITATHFSHNCNMSHQELEQRLGEAGIRAAWDGMMLKW 277 >gi|156937959|ref|YP_001435755.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566943|gb|ABU82348.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 240 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 99/268 (36%), Gaps = 40/268 (14%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G + G P +R R S + E G +D G Sbjct: 5 FLGTGPASGWPAYG---------KETEKRRRPS---TYAFECGEAKFF-IDVGSWEAALE 51 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +++ ++D +L +H H DH G++ F + + ++ + +H Y F+ Sbjct: 52 GAKRLGNVDFILISHAHVDHWGGLN-----FFRWGPEMPTFSIKETFEH-----PY-FRE 100 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCT 185 + D P ++ +V ++ P H I + GF +AY Sbjct: 101 IKD-------APFSLKLLEVRPFETFEIKGVKITPFPLNHS-IPASGFLVECGSKLAYAL 152 Query: 186 DVNAFPAESLEKLQN-LDFLIID-ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D P ESLE L+ +D+LI+D AL G +H + E+L+ + I K H+ Sbjct: 153 DTKWLPQESLELLKGSVDYLIVDAALPKGEEGAHNTYEEALRLGKEIGAKVVFAVHLLPS 212 Query: 244 LDYDMVLKS---TPSRVVPAFDGMQFSS 268 + VL +V DG F Sbjct: 213 VREAEVLAEGEALGVKVEVPDDGDSFEL 240 >gi|313125287|ref|YP_004035551.1| metal-dependent hydrolase, beta-lactamase superfamily i [Halogeometricum borinquense DSM 11551] gi|312291652|gb|ADQ66112.1| metal-dependent hydrolase, beta-lactamase superfamily I [Halogeometricum borinquense DSM 11551] Length = 274 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 91/278 (32%), Gaps = 64/278 (23%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 + C + RTR S+ + + ++++D PDF Q L +V DA L Sbjct: 19 CECDTCREARARGVERTRFSVHVE---NDRTGESLLIDFSPDFRQQFLTHEVPLPDAGLI 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------MKHLFESFRYCFKALDDRT 133 TH H DHI G+ G + + V+AA + + + F Y Sbjct: 76 THVHFDHIDGL----GNAYRVFDDLPVHAADETDPKTGQSVAETVASKFDY--------- 122 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDV 187 ++ I + ++ G + +P+ +H + G + ++ D Sbjct: 123 ----LDRISVRAQTPFETFRTCGLDVTLVPV--EHPPLLCYGLTIEDSETGAKLSLSGDT 176 Query: 188 N-AFPAESLEKLQNLDFL----IIDALKNGLHS-----------------SHFSLSESLK 225 + P +S L + D L I+ A H H + +L Sbjct: 177 SYGIPEDSRSVLSDPDLLLAEAIVPASLCQHHPLGGKHFDDEGVPRTFGTKHMTREGALA 236 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + +N + L H + + A DG Sbjct: 237 LADDLNAEQTRLVHTAHYYPVEEAFEE-----PLAVDG 269 >gi|257422310|ref|ZP_05599300.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|257164134|gb|EEU94094.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|315156019|gb|EFU00036.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 276 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 YAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|226327468|ref|ZP_03802986.1| hypothetical protein PROPEN_01339 [Proteus penneri ATCC 35198] gi|225203994|gb|EEG86348.1| hypothetical protein PROPEN_01339 [Proteus penneri ATCC 35198] Length = 273 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 103/290 (35%), Gaps = 44/290 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG AS G+P C K+ RT SS + + +++D Sbjct: 1 MKLHFLGTAASEGIPNPFCRCEHCLKARELGGKDIRTHSSAIVDDI--------MLIDVS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMK 116 P F Q++R+ + + +++L+TH H DH + D + GY + P+ ++ + Sbjct: 53 PTFSYQLMRDGMDATNFESLLFTHTHPDHFNVGDLFSRMEGYGFEINHPLHIFGNDRAIN 112 Query: 117 HLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 E Y + P V P+ A + + +++ G++ G Sbjct: 113 GCIEVLPGYSKERFAFHCLIPFVTVERNGYKITPLLANHAKWELCYVYHIEKDGKVIFYG 172 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLKKIEL 229 D FP + + L+N LD ++ + +H SL E Sbjct: 173 H---------DSGWFPELTWKWLENKPLDIVVFECTYGLNGKDRTDNHMSLETVFAAKEK 223 Query: 230 INPKNAIL--------THMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 + + L +H+ L +++ P + A+DG+ + Sbjct: 224 LQ-QQGCLHQDTQIAVSHISHSGKLLHHELEAVCAPHNIRVAYDGLTLET 272 >gi|257079255|ref|ZP_05573616.1| predicted protein [Enterococcus faecalis JH1] gi|294780254|ref|ZP_06745625.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|307269427|ref|ZP_07550770.1| hypothetical protein HMPREF9498_01564 [Enterococcus faecalis TX4248] gi|256987285|gb|EEU74587.1| predicted protein [Enterococcus faecalis JH1] gi|294452682|gb|EFG21113.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|306514266|gb|EFM82838.1| hypothetical protein HMPREF9498_01564 [Enterococcus faecalis TX4248] gi|315147512|gb|EFT91528.1| conserved hypothetical protein [Enterococcus faecalis TX4244] Length = 276 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRQDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|57641813|ref|YP_184291.1| metallo-beta-lactamase superfamily protein [Thermococcus kodakarensis KOD1] gi|57160137|dbj|BAD86067.1| Alkylphosphonate utilization protein PhnP homolog, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 258 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 92/265 (34%), Gaps = 37/265 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG G+ G P+ C NP RRTR SL I ++VD P Sbjct: 1 MKVIILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYIE--------GGILVDPSP 52 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 D + + R ++ V TH H DHI G L+ + + IDVY+ + Sbjct: 53 DLHYHLERLN-RKVEKVFITHAHFDHIAGFPELQVF-----KRIDVYSHRQAID-----M 101 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG-- 179 A+ P + + G + H I + GF F Sbjct: 102 AKHLSAIFLGGAAPENRDWGYHELEFGKWYEIDGMKVHH--FRTTHRSIENAGGFLFEIK 159 Query: 180 --NVAYCTDVNAFPA-----ESLEKLQNLDFLIIDALKNGLHS-SHFSLSESLKKIELIN 231 +A D P ++L+ L+ D LI + +H + +++K E+ Sbjct: 160 GKRIAVTGDTG--PEILKDKKTLKLLEGADLLIAEMTHRESIPGTHLGVEDAIKLAEITG 217 Query: 232 PKNAILTHMHVD-LDYDMVLKSTPS 255 A+ H+ ++++ K Sbjct: 218 ASYAVFAHISHSNYTHEVLEKRVRE 242 >gi|257053280|ref|YP_003131113.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692043|gb|ACV12380.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 292 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 105/299 (35%), Gaps = 82/299 (27%) Query: 23 GDWGACDPTNP---------KNR----------RTRSSLKISRVSERGSNTTVIVDTGPD 63 C+ ++R RTR S+ + ++ T+++D PD Sbjct: 19 CGCDVCEQARDPDDALREQLRDRGVEVGDRGVERTRFSVHVR---NERTDETLLIDASPD 75 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA--------PDCM 115 F Q LRE + + DA + +H H DH+ G+ G F + R + VYAA Sbjct: 76 FRTQFLREDLDAPDAAVISHVHFDHLDGL----GNFYRLTRDMPVYAAGEVDPATGQSVA 131 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + E + Y ++ I ++ D + AG + +P+ H +S G Sbjct: 132 QSVRERYDY-------------LDVIDVKARDPFESFRVAGLDVTLVPVD--HPPLSCYG 176 Query: 176 FRFGN------VAYCTDVN-AFPAESLEKLQNLDFLIIDAL----KNGLHS--------- 215 + ++ D + P S + L D L++D + + H Sbjct: 177 LVVEDPETGAKLSLSGDTSYEVPQASRDALAGADLLLVDGILPADRCDTHPAGGSHHDDE 236 Query: 216 --------SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 H ++ + + E ++ + H+ L + V A DG +F Sbjct: 237 GVPMTYGSKHMTIEGAQRLSEELDAGELRIVHLSHYLPVETAFD-----VPLAVDGERF 290 >gi|268591921|ref|ZP_06126142.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] gi|291312309|gb|EFE52762.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] Length = 273 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 104/290 (35%), Gaps = 44/290 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG AS G+P C K+ RT SS + + +++D Sbjct: 1 MKLHFLGTAASEGIPNPFCRCEHCQKARELRGKDIRTHSSAIVDDL--------MLIDVS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMK 116 P F Q++R+ + +++L+TH H DH + D + GY + P+ ++ + Sbjct: 53 PTFSYQLMRDGMDATKFESLLFTHTHPDHFNVGDLFSRMEGYGFEIHHPLHIFGNDRAIN 112 Query: 117 HLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + Y + D P V P+ A + + ++++G+ Sbjct: 113 GCLDVLPGYSKERFDFHCLIPFVTVERNGYKITPLLANHAKWELCYVYHIEKNGK----- 167 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDALK----NGLHSSHFSLSESLKKIEL 229 + Y D FP + + L+N LD ++ + +H SL E Sbjct: 168 ----AIFYGHDSGWFPELTWKWLENKQLDIVVFECTYGLNGKNRTDNHMSLETVFAAKEK 223 Query: 230 INPKNAIL--------THMHVD--LDYDMVLKST-PSRVVPAFDGMQFSS 268 + + L +H+ L ++ + P + A+DG+ + Sbjct: 224 LQ-QQGCLHSETQIAVSHISHSGKLLHEELEAICAPYNIRVAYDGLTLEA 272 >gi|315231189|ref|YP_004071625.1| metal-dependent hydrolase [Thermococcus barophilus MP] gi|315184217|gb|ADT84402.1| metal-dependent hydrolase [Thermococcus barophilus MP] Length = 251 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 88/248 (35%), Gaps = 33/248 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG G+ G P+ C P++RRTR S+ I ++D P Sbjct: 1 MKVIVLGSGSYSGTPKPLCSCENCVRARKYPQHRRTRFSVFI-------PEIKALIDPSP 53 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD---CMKHLF 119 D + + + + V TH H DHI G+ L+ + + + Y+ KHL Sbjct: 54 DLHYHLEHLNMD-VKRVFITHAHFDHIAGLPELQIF-----KGVKFYSHEYAVNTAKHLQ 107 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 E F D Y P+ N + PI G + +G + Sbjct: 108 E----LFLGERDWEYIPLEF-----NRWYDFGFRVYHFPTIHQPIKAAGGFVIEIGKK-- 156 Query: 180 NVAYCTDVNAF---PAESLEKLQNLDFLIIDALKNGL-HSSHFSLSESLKKIELINPKNA 235 +A D ++E ++ D LI + K +H + +++K + + K Sbjct: 157 KIAITGDTGPEILGDENAIEIMKGSDLLIAEMTKKHSVPKTHLGVEDAIKLAQKVEAKKT 216 Query: 236 ILTHMHVD 243 + H+ Sbjct: 217 VFAHISHS 224 >gi|300710169|ref|YP_003735983.1| ATP-binding protein [Halalkalicoccus jeotgali B3] gi|299123852|gb|ADJ14191.1| ATP-binding protein [Halalkalicoccus jeotgali B3] Length = 272 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 95/276 (34%), Gaps = 62/276 (22%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 + G C+ R+R S+ ++ ++ ++++D PDF Q L ++V DA++ Sbjct: 19 CECGTCERARELGVERSRFSVHLT---NEVTDQSLLIDASPDFRHQFLTQEVPLPDAMVI 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYA--------APDCMKHLFESFRYCFKALDDRT 133 +H H DH+ G+ G + + V+A + + + Y Sbjct: 76 SHIHFDHLDGL----GNAYRLFEDLPVHAANEIDPVTDESVADTIRDKYDY--------- 122 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN- 188 ++ I + ++ ++ G + +P+ H + G ++ D + Sbjct: 123 ----LDRITVRDHAPFERFRTCGFDVTLVPVD--HPPLYCYGLVIEEGETKLSLTGDTSY 176 Query: 189 AFPAESLEKLQNLDFL----IIDALKNGLHS-----------------SHFSLSESLKKI 227 P S E L + D L I+ A + H H + +L Sbjct: 177 DVPDRSKEALSDPDLLLADAIVPASRCEGHPIGGRHHDSEGVPRTFGTKHMTREGALDLA 236 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 E +N + L H+ + A DG Sbjct: 237 EELNAERTRLVHLAHFYPPEEAFAE-----PLAVDG 267 >gi|322368278|ref|ZP_08042847.1| ATP-binding protein [Haladaptatus paucihalophilus DX253] gi|320552294|gb|EFW93939.1| ATP-binding protein [Haladaptatus paucihalophilus DX253] Length = 272 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 89/276 (32%), Gaps = 62/276 (22%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 D C R+R S+ + ++ ++++D PDF Q L V D VL Sbjct: 19 CDCDTCREARDSGVERSRFSVHVR---NEETDESLLIDASPDFRSQFLDNDVSLPDEVLI 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------MKHLFESFRYCFKALDDRT 133 TH H DH+ G+ G + + V+A + + F Y Sbjct: 76 THIHFDHLDGL----GNAYRLFDSLPVHATDETDPKTGESVADAIRNKFDY--------- 122 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN- 188 ++ I + + + G + +P+ +H + G +A D Sbjct: 123 ----LDRITVHGHAPLASFSACGFDVTFVPV--EHPPLVCYGVVVEKDGSKLALTGDTGY 176 Query: 189 AFPAESLEKLQNLDFLIIDALKN----------GLHSS-----------HFSLSESLKKI 227 + P S E L + D + DA+ G H + H + +L Sbjct: 177 SIPDASREALSDADLFLADAIVPASLCEYHPAGGRHHTEDGVPRTFGHKHMTREGALSLA 236 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + ++ L H+ + + A DG Sbjct: 237 DELDASETRLVHVSHFYPEEEAFEE-----PLAVDG 267 >gi|329570096|gb|EGG51841.1| hypothetical protein HMPREF9520_03097 [Enterococcus faecalis TX1467] Length = 276 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 108/284 (38%), Gaps = 42/284 (14%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG GA+ +P I + C K R I ++ + +++D D Y+ +L Sbjct: 6 LGTGAAERIPGIFCNCKLCKYAREKKGRE-----IRTQTQLIIDDILLIDFPGDSYLHLL 60 Query: 70 REQVLSID--AVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + D ++L +H H+DH +G D + GY L + VY +F Sbjct: 61 QYDLCFADFNSLLISHWHSDHFYGDDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + D R + ++ P C A I P+ QHG S F F G Sbjct: 121 EGRLDDTRLHYQVIQPY--------KCFTIANYTIY--PLPAQHGNFSEDCFIFVIDDGK 170 Query: 181 VAYCT--DVNAFPAESLEKLQNLDFLI----IDALK--NGLHSSHFSLSESLKKIELINP 232 A+ + D F +E E L+ L+ +D N +SH + E+LK I + Sbjct: 171 DAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKE 230 Query: 233 K-----NAILT--HMHV--DLDYDMVLKSTPSR-VVPAFDGMQF 266 + I H L Y + + ++ ++DG++ Sbjct: 231 RKLVTDKTIYVANHFSHNGGLSYAEMAALSQKHEIITSYDGLEI 274 >gi|262274182|ref|ZP_06051994.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Grimontia hollisae CIP 101886] gi|262221992|gb|EEY73305.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Grimontia hollisae CIP 101886] Length = 211 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 38/233 (16%) Query: 47 VSERGSNTTVIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G D + R S L TH H DH+ G+ LR P Sbjct: 4 WGNCSDRERLLIDAGLMDLHK---RFPAGSYYGFLLTHFHVDHVQGLFHLR---WGNPSP 57 Query: 106 IDVYAAPD---CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I V+ D C L P + E N + + Sbjct: 58 IPVWCPDDELGCADLLKH---------------PGCLQFLPEMNHGDVV---NINGLRVT 99 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQ---NLDFLIIDALKNGLH- 214 P+ +H R ++G+ ++AY TD PA++ + L LD LI+D H Sbjct: 100 PLQLKHSR-PTVGYLLEYGQKSIAYLTDTYGLPAQTCDFLASQPQLDALIMDCSFPPDHE 158 Query: 215 -SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 S+H ++ + + E + PK I+TH+ +LD ++ + + V+ +DGM+ Sbjct: 159 GSNHGNIESAYQIYENLQPKALIITHIGHELDCWLMENNVQTGVLAGYDGMKI 211 >gi|288870412|ref|ZP_06113991.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288867296|gb|EFC99594.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 282 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 100/290 (34%), Gaps = 44/290 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG A+ G P + AC KN RTRS + + TV++D Sbjct: 7 MEIKYLGTAAAEGWPAVFCTCEACKRARKLGGKNIRTRSQAVV--------DNTVLIDLP 58 Query: 62 PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPI-DVYAAPDCM 115 PD Y+ VLRE + +I++VL TH H DH + ++ L Y + P+ VY Sbjct: 59 PDTYLHVLREGMEIDTIESVLITHSHQDHFYPMELLMRGEPYAHRPGAPVLTVYGNDKVE 118 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSL 174 + + P ++ + P G P+ H + + L Sbjct: 119 AAYRLAM--------EMNDSPTLHAQLDFKRVRPFEPVGLPGGYVVTPLAANHAKDENCL 170 Query: 175 GFRFGNVA----YCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHSS--HFSLSES--- 223 + Y D +P E+ + L+ + D H L ++ Sbjct: 171 VYLLEKDGKRLFYGHDSGNYPEETWDYLRGKMIGLASFDCTNIEAPDGNYHMGLPDNRYV 230 Query: 224 -LKKIELINP-KNAILT--HMHVD--LDYDMVLKSTP-SRVVPAFDGMQF 266 + I +N + H + L ++ ++ V A+DGM Sbjct: 231 KARMIREGCAGENTVFVINHFSHNGKLMHEEIVDCVREDGFVVAYDGMTV 280 >gi|110668991|ref|YP_658802.1| PhnP-like protein [Haloquadratum walsbyi DSM 16790] gi|109626738|emb|CAJ53205.1| PhnP-like protein [Haloquadratum walsbyi DSM 16790] Length = 274 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 89/272 (32%), Gaps = 52/272 (19%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 D C+ + RTR S+ I N ++++D PDF Q L+ V DA + Sbjct: 19 CDCNTCEHARQRGIERTRFSVHIENPR---RNESILIDFSPDFRQQFLQRNVSFPDAGII 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 TH H DH+ G+ G + + ++AA + E+ R Y ++ + Sbjct: 76 THIHFDHLDGL----GNAYRLCDDLPIHAANETDPQTTET----VAETVARKYS-YLDQV 126 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN---------AFPA 192 + + + G I+ +P+ H + G + TD P+ Sbjct: 127 TVNPHSPFEVFEICGLEIQLVPVD--HPPLYCYGVVIED--PVTDTKLSLSGDTSYGVPS 182 Query: 193 ESLEKLQNLDFLIIDALKN----GLHS-----------------SHFSLSESLKKIELIN 231 ES + L N D + DA+ H H + + E ++ Sbjct: 183 ESQDALSNPDLFLADAIVPASMCEHHPLGGKHHNKDGVPRTFGTKHMTREGACDLAEALD 242 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H D + A DG Sbjct: 243 ADKTRFVHTGHYYPADEAFED-----PLAIDG 269 >gi|281356144|ref|ZP_06242637.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281317513|gb|EFB01534.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 278 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 108/293 (36%), Gaps = 44/293 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T LG A+ G+P + + C ++ R R + I + +VD G Sbjct: 1 MKVTFLGTAAAEGIPALWCECEVCRKAQQQRDRDLRRRCAYLIDSDT--------LVDFG 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMK 116 PD + Q + ID +++TH H+DH++GI+ + +F + I V+ +P Sbjct: 53 PDIFWQCTEFNIDLTRIDRIVFTHAHSDHLNGIEFIWRRTPWFSTLRHRIKVFGSPAIFA 112 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-----GRI 171 + +D Y ++ ++I+ +V + G E + + H ++ Sbjct: 113 RMLSQI-----TMDSSIY--QLSDLLIDPVEVRHGQTTDDGDFELLTLNADHAPGLEPQV 165 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQN--LDFLIIDA---LK-NGLHSSHFSLSESLK 225 +G D ES E L+ LD + ID L+ H ++ L Sbjct: 166 HVIGRNGKRFFIANDTGFLREESWELLKGVKLDLVEIDCTCGLRTPDCDRGHQGVNSVLA 225 Query: 226 KIEL------INPKN-AILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFSS 268 + I P+ H + L D+ P R+ A+DG+ Sbjct: 226 FRDRLLELGCITPETPVYANHFSHNGGALHADLEAFFAPHRIRVAYDGLTVEL 278 >gi|15790909|ref|NP_280733.1| ATP-binding protein [Halobacterium sp. NRC-1] gi|169236654|ref|YP_001689854.1| phnP-like protein [Halobacterium salinarum R1] gi|10581480|gb|AAG20213.1| ATP-binding protein [Halobacterium sp. NRC-1] gi|167727720|emb|CAP14508.1| phnP-like protein [Halobacterium salinarum R1] Length = 273 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 92/274 (33%), Gaps = 47/274 (17%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI-DAVL 80 D C + RTR S+ + ++ S +++D PDF Q LR LS+ DA + Sbjct: 19 CDCATCQAARERGVERTRFSVHV---ADEASGDALLIDFSPDFRAQFLRTDALSLPDAGV 75 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH+ G+ G + + VYAA D ES D ++ Sbjct: 76 VTHVHFDHLDGL----GNAYRLFDDLPVYAATDTDPTTGESVAETVAGKYDY-----LDS 126 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN-AFPAESL 195 I + +AG + +P+ H + G +A D A P S Sbjct: 127 IALRGVAPRRSFAAAGFDVTLVPVD--HPPLLCYGVVVERAGAKLAVSGDTTYAIPEASR 184 Query: 196 EKLQNLDFLIIDAL----------KNGLHS-----------SHFSLSESLKKIELINPKN 234 + +++ D L+ D + K G H H + +L + ++ Sbjct: 185 DAMRDPDLLVADGIVPAHLTHHHPKGGRHPDADGVPRTFGTKHMTREGALALGDDLDADR 244 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + H + A DG Sbjct: 245 TRVVHAAHYYPVEEAFAD-----EIAVDGETIRL 273 >gi|270489168|ref|ZP_06206242.1| conserved domain protein [Yersinia pestis KIM D27] gi|270337672|gb|EFA48449.1| conserved domain protein [Yersinia pestis KIM D27] Length = 120 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP D C +P RR S + E T ++D G Sbjct: 1 MQLTLLGTGCAQQVPVFGCDCVICTQASVDPARRRKPCSAMLYYQGE-----TTLIDAGL 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 Q R I L TH H DH+ G+ LR I VY P Sbjct: 56 PTLDQQFRAG--EIQRFLLTHYHMDHVQGLFPLRWGC---GNKIPVYGPP 100 >gi|257386799|ref|YP_003176572.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257169106|gb|ACV46865.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 278 Score = 105 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 39/211 (18%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 D C+ + RTR S+ + RV + ++++D PDF Q LRE V DA + Sbjct: 19 CDCATCERARDRGVERTRFSVHVERV----NGDSLLIDFSPDFRQQFLRESVPLPDAAVV 74 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------MKHLFESFRYCFKALDDRT 133 TH H DH+ G+ G + + VYAA + + + + + Y Sbjct: 75 THVHFDHLDGL----GNVYRLVDSLPVYAADETDPQTGTSVVGTIRDRYHY--------- 121 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDV 187 ++ I + ++AG + +P+ H + S G R + +A D Sbjct: 122 ----LDRISVRGRTPFQRFEAAGFEVTLVPV--VHPPLVSYGLRVDDPDSGASLAISGDT 175 Query: 188 N-AFPAESLEKLQNLDFLIIDALKNGLHSSH 217 + A + E L+ D +++ + + SH Sbjct: 176 SYAIDENAREVLRGADLALVEGIVHADLCSH 206 >gi|292656038|ref|YP_003535935.1| ATP-binding protein [Haloferax volcanii DS2] gi|291372840|gb|ADE05067.1| ATP-binding protein [Haloferax volcanii DS2] Length = 274 Score = 105 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 91/278 (32%), Gaps = 64/278 (23%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 D C + RTR S+ + + +++VD PDF Q L + V D L Sbjct: 19 CDCETCLAARERGIERTRFSVHVQ---NERTGESLLVDFSPDFRHQFLTQDVPLPDEALV 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPD--------CMKHLFESFRYCFKALDDRT 133 TH H DH+ G+ G + + V+AA + + F Y Sbjct: 76 THIHFDHLDGL----GNVYRLLDDLSVHAADEVDPVTGESVADAIRSKFDY--------- 122 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDV 187 ++ I +E+ ++ G + +P+ H + G + ++ D Sbjct: 123 ----LDRISVEDRTPFESFRACGLDVTFVPV--VHPPLVCYGVAIEDPETGAKLSLSGDT 176 Query: 188 N-AFPAESLEKLQNLDFL----IIDALKNGLHS-----------------SHFSLSESLK 225 A P S + L++ D L I+ A H H + ++ Sbjct: 177 TYAIPEASRDVLRDPDLLLAEAIVPASVCEYHPIGGDDYDEDGVARTFGTKHMTREGAIA 236 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 E +N L H+ D + A DG Sbjct: 237 LGEELNTDETRLVHVAHYYPADEAFEE-----PLAVDG 269 >gi|257870311|ref|ZP_05649964.1| beta-lactamase domain-containing protein [Enterococcus gallinarum EG2] gi|257804475|gb|EEV33297.1| beta-lactamase domain-containing protein [Enterococcus gallinarum EG2] Length = 279 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 99/294 (33%), Gaps = 45/294 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT-NPKNR--RTRSSLKISRVSERGSNTTVIVDTG 61 T LG A+ VP I + C K R RT++ + + +++D Sbjct: 1 MKVTYLGTAAAERVPAIFCNCRICRHAMEKKGREIRTQTQALL-------DDGKLLIDFP 53 Query: 62 PDFYMQVL--REQVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVYAAPDCMK 116 D Y+ L R ++A+L TH H+DH +G + GY + VY+ Sbjct: 54 GDSYLHRLSGRVDYNRVEALLLTHWHSDHFYGEYLAYRMSGYANGITTQLAVYSNAYVKG 113 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 +F L+ R + ++E G + ++P H + Sbjct: 114 FYDRAF-----QLEGRYDEQRLTYHLLEAYQKTW---INGYEVYSLPAQHGHFAEDCFIY 165 Query: 177 RFGN-----VAYCTDVNAFPAESLEKLQN----LDFLIIDALKNGLH---SSHFSLSESL 224 + + Y D E L+ D + +D ++H + S+++ Sbjct: 166 VIKDPTGKTLLYGHDTGYLTEEMFAFLEANKFIFDCVSMDCTGQTNADQMANHMNWSQNI 225 Query: 225 KKI-----ELINPKNAILT--HMHVDLDY---DMVLKSTPSRVVPAFDGMQFSS 268 + + + I H + +M S ++ A+DG++ Sbjct: 226 QMKQELMDRKLATEKTIFVANHFSHNGGRTYQEMADLSASEMIITAYDGLEIHL 279 >gi|168216201|ref|ZP_02641826.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] gi|182381924|gb|EDT79403.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] Length = 280 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 112/301 (37%), Gaps = 58/301 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F I+G G + +P+ + C K + R SL + + ++VDT Sbjct: 1 MKFIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFL-------DDINLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHG--------IDGLRGYFLKQ-KRPIDVYAAP 112 D + + ID VL++H DH G ++ L K + PI+V+A Sbjct: 54 EDITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEASCGKNCENPIEVFALE 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 MK + S + F + D Y + N I ++ D I +K I+ I H + Sbjct: 114 GVMKDI-NSIGFKFGSYLDY-YENVRNLIKRKSVDDYIYIK----DIKVSFIKVNHATVF 167 Query: 173 SLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLII------------------DALKNGL 213 + Y DV FP + + D LII + L++ L Sbjct: 168 VFEKEGKKLIYAPCDVKPFPES--KLFLDADCLIIGNTIVGEVLKDGFILKEDNPLRDEL 225 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 F++S+ + N K I+TH+ D DY + K + A+DGM+ Sbjct: 226 ----FTISDIEELKNKYNIKRVIITHLEEDWGKSYD-DYVELEKEL-DGIEFAYDGMKIE 279 Query: 268 S 268 Sbjct: 280 I 280 >gi|229086827|ref|ZP_04218989.1| metal-dependent hydrolase [Bacillus cereus Rock3-44] gi|228696471|gb|EEL49294.1| metal-dependent hydrolase [Bacillus cereus Rock3-44] Length = 281 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 51/298 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 LG G ++ +PR C K R S+ I + +++DT Sbjct: 1 MKIEFLGTGGAIPIPRPGSYSKVCKEAREKGVPYSRMGPSVFI-------HDLKLLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLF 119 + +Q+ R + ++A +Y+H H DH G + K+ VY + Sbjct: 54 EEIRLQLERAHIQRVEAGIYSHWHPDHTMGRRIWETMAFETKKAWGTTVYLPEQVAADMK 113 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F + L ++ V+++ I I+ P F Sbjct: 114 Q-FLGSWDHLQFMHQQGWIDLQVLQDGHSFIK-----NNIKVTPFRLH--EEYVYAFLLE 165 Query: 180 ----NVAYCTD--VNAFPAESLEKLQNLDFLIIDALKNGLH---------SSH------F 218 V D P + NLD I+ +H Sbjct: 166 ENEKKVLIAPDELYKWEPPA--HLIGNLDLAILPMGMVEFSWKTKERLIDRAHIERIREA 223 Query: 219 SLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPS--RVVPAFDGMQFSS 268 + E+L+ ++ + K I+TH+ D +++ + V+ A D MQ Sbjct: 224 TFEETLEVVKKLRAKKTIITHIEEVDNLGHDELHEIAMDLQKEELNVMFAHDTMQIEI 281 >gi|169346942|ref|ZP_02865890.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|169297001|gb|EDS79125.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] Length = 280 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 58/301 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F I+G G + +P+ + C K + R SL + + ++VDT Sbjct: 1 MKFIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFL-------DDINLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAP 112 D + + ID VL++H DH G+ + LR +L + PI+V+A Sbjct: 54 EDITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLDVSCGKNCENPIEVFALE 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D MK + S + F + D Y + N I ++ + I +K I+ I H + Sbjct: 114 DVMKDI-NSIGFKFGSYLDY-YENVRNLIKRKSVEDYISIK----DIKVSFIKVNHATVF 167 Query: 173 SLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLII------------------DALKNGL 213 + Y DV FP + N D LII + L++ L Sbjct: 168 VFEKEGKKLIYAPCDVKPFPES--KLFLNADCLIIGNTIVGEVLKDGFILKEDNPLRDEL 225 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 F++ + + N K I+TH+ D DY + K + A+DGM+ Sbjct: 226 ----FTIGDIEELKNKYNIKRVIITHLEEDWGKSYD-DYVELEKGL-DGIEFAYDGMKIE 279 Query: 268 S 268 Sbjct: 280 I 280 >gi|110799782|ref|YP_695428.1| hypothetical protein CPF_0981 [Clostridium perfringens ATCC 13124] gi|168212435|ref|ZP_02638060.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|110674429|gb|ABG83416.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124] gi|170716091|gb|EDT28273.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 280 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 110/301 (36%), Gaps = 58/301 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F I+G G + +P+ + C K R R SL + + ++VDT Sbjct: 1 MKFRIVGSGGCVSLPKPLCNCEVCKEARSKGRSYSRCGCSLFL-------DDINLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGI--DGLRGYFL-------KQKRPIDVYAAP 112 D + + ID VL++H DH G+ + PI+V+A Sbjct: 54 EDITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLELSCGKNCENPIEVFALE 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D MK + S + F + D Y + N I ++ + I +K+ I+ I H + Sbjct: 114 DVMKDI-NSIGFKFGSYLDY-YENVRNLIKRKSVEDYIFIKN----IKVSFIKVNHATVF 167 Query: 173 SLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLII------------------DALKNGL 213 + Y DV FP + N D LII + L++ L Sbjct: 168 VFEKEGKKLIYAPCDVKPFPES--KLFLNADCLIIGNTIVGEVLKDGFILKEDNPLRDEL 225 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 F++ + + N K I+TH+ D DY + K + A+DGM+ Sbjct: 226 ----FTIGDIEELKNKYNIKRVIITHLEEDWGKSYD-DYVELEKGL-DGIEFAYDGMKIE 279 Query: 268 S 268 Sbjct: 280 I 280 >gi|161505245|ref|YP_001572358.1| hypothetical protein SARI_03383 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866592|gb|ABX23215.1| hypothetical protein SARI_03383 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 174 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 71/190 (37%), Gaps = 28/190 (14%) Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 DH+ G+ LR I VY PD + FK + V P V Sbjct: 1 MDHVQGLFPLR---WGMGASIPVYGPPD-----EQGCDDLFKHPGILDFTYTVEPFV--- 49 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN- 200 G ++ P+ H ++ + G+ VA+ +D P +L+ L N Sbjct: 50 -----TFDLQG--LQVTPLPLNHSKL-TFGYLLESAHSRVAWLSDTAGLPDSTLKFLLNN 101 Query: 201 -LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 L ++ID ++ +H L+ + E++ I+TH+ D M+ + P Sbjct: 102 SLQVVVIDCSYEPRSVPPRNHSDLNRVIAINEMVRCPRVIVTHISHHFDTWMMANNLPDG 161 Query: 257 VVPAFDGMQF 266 + +D M+ Sbjct: 162 IEAGYDEMEI 171 >gi|330883409|gb|EGH17558.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 96 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCPACSAARANQDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R S+ +L TH HADH G+ LR Q I V Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPV 96 >gi|330945558|gb|EGH47080.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 162 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 14/135 (10%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT-NPKN-RRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G + VP AC N + RR S I +R + + D Sbjct: 1 MRLTLLGTGDARQVPVYGCQCAACTAALNNHDLRRLPCSALIECADQRWLIDSGLTDLTE 60 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFE 120 R S+ +L TH HADH G+ LR Q I V+ A P+ + L++ Sbjct: 61 -------RFPPRSLSGILQTHYHADHAQGLLHLR---WGQGLVIPVHGPADPEGLADLYK 110 Query: 121 SFRYCFKALDDRTYP 135 RY R + Sbjct: 111 PPRYPGFQPAIRRFR 125 >gi|149913733|ref|ZP_01902265.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] gi|149812017|gb|EDM71848.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] Length = 245 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 89/276 (32%), Gaps = 43/276 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T +G G + G R + ++ T ++D G Sbjct: 1 MQITFVGTGDAFG----------------SGGRFNTCFHVAT-----EETRFLIDCGASS 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 + + Q+ ID + TH H DH G+ +F K++ P+ + K Sbjct: 40 MIALKAMQIDRAAIDTIFITHFHGDHFGGLPYFMLDAQFFAKRRAPLTIVGPEGLQKAFV 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFR 177 + F P + +IE + G + +HG + L +R Sbjct: 100 QVMETAFAG--SSGTVPKFDLQLIELQPGEPLV---IGSVTVKAARVRHGPVDGPFLAYR 154 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINP 232 F +AY D + + D LI +A H L + + P Sbjct: 155 FEVEGKRLAYTGDTEWV-DTLYDVCSDADCLIAEAYFFEKKVPFHLDLVTLGSHLPRLAP 213 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 K ILTHM+ D+ + + + A DG+ S Sbjct: 214 KRLILTHMNEDM----LSRDLAGQFEKAEDGLVISL 245 >gi|168204952|ref|ZP_02630957.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|168211508|ref|ZP_02637133.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170663469|gb|EDT16152.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|170710531|gb|EDT22713.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] Length = 280 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 112/301 (37%), Gaps = 58/301 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F I+G G + +P+ + C K + R SL + + ++VDT Sbjct: 1 MKFIIVGSGGCVSLPKPLCNCEVCKEARSKGKPYSRCGCSLFL-------DDINLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHG--------IDGLRGYFLKQ-KRPIDVYAAP 112 D + + ID VL++H DH G ++ L K + PI+V+A Sbjct: 54 EDINYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEASCGKNCENPIEVFALE 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 +K + S + F + D Y + N I ++ + I +K I+ I H + Sbjct: 114 GVIKDI-NSIGFKFGSYLDY-YENVRNLIKRKSVEDYISIK----DIKVSFIKVNHATVF 167 Query: 173 SLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLII------------------DALKNGL 213 + Y DV FP + + D LII + L++ L Sbjct: 168 VFEKEGKKLIYAPCDVKPFPES--KLFLDADCLIIGNIIVGEVLKDGFILKEDNPLRDEL 225 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 F++S+ + N K I+TH+ D DY + K + A+DGM+ Sbjct: 226 ----FTISDIEELKNKYNIKRVIITHLEEDWGKSYD-DYVELEKEL-DGIEFAYDGMKIE 279 Query: 268 S 268 Sbjct: 280 I 280 >gi|158521122|ref|YP_001528992.1| hypothetical protein Dole_1108 [Desulfococcus oleovorans Hxd3] gi|158509948|gb|ABW66915.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3] Length = 282 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 91/299 (30%), Gaps = 52/299 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 TILG G +PR C K R+ S + +++D Sbjct: 1 MELTILGSGGCTVIPRPLCTCPVCRQAREKGIPYARSGPSAFLHDAG-------LLIDAP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGI-------DGLRGYFLKQKRPIDVYAAPDC 114 + Q+ RE + +D +L+TH DH+ G R + + ID+ Sbjct: 54 AEIAGQLNRESIGQVDHLLFTHLDPDHVEGFRVVEQITLDFRTWRSCPGKCIDLVLPRPL 113 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + + I + G + + G + Sbjct: 114 MDRLER-----IRTAYGSQAAFYRDQGFIRCRA--FDRSTRIGDVTVTALPVDRGGQIAY 166 Query: 175 GFRFG----NVAY-CTDVNAFPAESLEKLQNLDFLII------DALKNGL--HSSH---- 217 F + Y D+ FP +++ D L+I LK+G H Sbjct: 167 VCVFEKAGVKIVYAACDIRPFPEND-PAVRDPDLLVIQPGLFETGLKHGFVYPPDHVSRS 225 Query: 218 --FSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ +++ I + H+ D DY + + + A DGM+ Sbjct: 226 TLYTFDQTVDLCRRIGAGKVVFIHLEEYWNRSHD-DYTALEGGL-NNMRFAHDGMRLDV 282 >gi|302385014|ref|YP_003820836.1| hypothetical protein Closa_0585 [Clostridium saccharolyticum WM1] gi|302195642|gb|ADL03213.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 281 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 109/300 (36%), Gaps = 64/300 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 +G GA+ G P + AC+ N +TRS I + V++D Sbjct: 1 MKLQYIGTGAAEGFPGMFCQCEACERARKAGGHNLKTRSCAII--------DDQVLIDLS 52 Query: 62 PDFYMQ--VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------------- 105 PD Y+Q +L ++ + ++ TH H DH L +FL + Sbjct: 53 PDLYVQSLLLGLELGKVKDLVVTHTHKDH------LDSFFLGLRARDGATKLPKIMEEEN 106 Query: 106 -IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY + + +AL++ +Y N I V + G ++ P+ Sbjct: 107 YLSVYGSSFVETAVH-------RALEEESYS---NDSRIRFIPVETGIWFQAGRLKFCPL 156 Query: 165 LQQHGR-----ISSLGFRFGNVAYCTDVNAFPAESLEKLQNL----DFLIIDALKNG-LH 214 H + I ++ G++ Y D A E+L+ + +L D + +D + Sbjct: 157 KANHKKDELCHIYAVTDGSGSLLYANDTGALSEETLDMVGSLGLVFDVVSMDCARGTLPG 216 Query: 215 SSHFSLSESLKKIELI------NP-KNAILTHMHV--DLDYDMVLKSTP-SRVVPAFDGM 264 H + E+L + + P L H+ + +D + + A+DGM Sbjct: 217 DGHMGIKENLDLKKCLEQMGCTGPNTRYYLNHLSHMSGVIHDDLQRMMRAEGFTVAYDGM 276 >gi|289580974|ref|YP_003479440.1| PhnP-like protein [Natrialba magadii ATCC 43099] gi|289530527|gb|ADD04878.1| PhnP-like protein [Natrialba magadii ATCC 43099] Length = 274 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 97/270 (35%), Gaps = 48/270 (17%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 + C+ ++ RTR S+ + ++ +++VD PDF Q LRE V DA + Sbjct: 19 CECDTCETARERDIERTRFSVHVE---NDRTDESLLVDFSPDFRYQFLRESVPLPDAAII 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 TH H DH+ G+ G + +DV+AA + +S + D ++ + Sbjct: 76 THIHFDHLDGL----GNVFRVFDSLDVHAADETDPQTGQSVAETVASDYDY-----LDAV 126 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVN-AFPAES 194 ++ + G + +P+ H + G + ++ D + A P S Sbjct: 127 TVQPTTPLESTRICGFDVTLVPVD--HPPLVCYGLAIEDPQTGAKLSLSGDTSYAIPQAS 184 Query: 195 LEKLQNLDFLIIDALKNGL----HS-----------------SHFSLSESLKKIELINPK 233 E L + D L+ DA+ H H + +L + ++ + Sbjct: 185 REVLADPDLLLADAIVPAELCDAHPIGGRHTDDDGVARTFGTKHMTREGALALADDLDAE 244 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 L H+ D A DG Sbjct: 245 QTRLVHIAHFYPADDAFAE-----PLALDG 269 >gi|182624979|ref|ZP_02952757.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|177909776|gb|EDT72194.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] Length = 280 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 103/301 (34%), Gaps = 58/301 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F I+G G + +P+ + C K + R SL + + ++VDT Sbjct: 1 MKFIIVGSGGCVSLPKPLCNCEVCKEARSKGKLYSRCGCSLFL-------DDINLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGI---DGLRGYFLKQ------KRPIDVYAAP 112 D + + ID VL++H DH G+ + LR +L+ + PI+V+A Sbjct: 54 EDITYGINYCDIKEIDRVLFSHVDPDHTLGMRVFEHLRLNWLEVSCGKNCENPIEVFALE 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D MK + +Y + + I+ I H + Sbjct: 114 DVMKDINS------IGFKFGSYLDYYENMRNLIKRKSVEDYIFIKNIKVSFIKVNHTTVF 167 Query: 173 SLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLII------------------DALKNGL 213 + Y DV FP + N D LII + L++ L Sbjct: 168 VFEKEGKKLIYAPCDVKPFPES--KLFLNADCLIIGNTIVGEVLKDGFILKEDNPLRDEL 225 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFS 267 F++S N K I+TH+ D DY + K + A+DGM+ Sbjct: 226 ----FTISNIEGLKNKYNIKRVIITHLEEDWGKSYD-DYVELEKGL-DGIEFAYDGMKIE 279 Query: 268 S 268 Sbjct: 280 I 280 >gi|297519006|ref|ZP_06937392.1| carbon-phosphorus lyase complex accessory protein [Escherichia coli OP50] Length = 166 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 25/179 (13%) Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 PI VY PD + FK + V P V+ G Sbjct: 1 PLRWGVGDPIPVYGPPD-----EQGCDDLFKHPGLLDFSHTVEPFVV--------FDLQG 47 Query: 157 GVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL- 209 ++ P+ H ++ + G+ VA+ +D P ++L+ L+N +++D Sbjct: 48 --LQVTPLPLNHSKL-TFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSH 104 Query: 210 --KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + +H L+ L ++I ILTH+ D ++ + PS FDGM+ Sbjct: 105 PPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEI 163 >gi|325577116|ref|ZP_08147600.1| hypothetical protein HMPREF9417_0341 [Haemophilus parainfluenzae ATCC 33392] gi|325160698|gb|EGC72819.1| hypothetical protein HMPREF9417_0341 [Haemophilus parainfluenzae ATCC 33392] Length = 273 Score = 99.8 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 102/292 (34%), Gaps = 55/292 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG GAS G+P C+ ++ RTRSS I + Sbjct: 1 MKLHFLGTGASEGIPNPYCKCELCEQVRKTGGRDVRTRSSAIIDDEIQIDI--------S 52 Query: 62 PDFYMQVLREQVLSID-----AVLYTHPHADHIH-GI--DGLRGYFLKQKRPIDVYAAPD 113 P+F+ Q V ID +L TH H DH + G + +R + + P+ +Y + Sbjct: 53 PEFFHQA---NVNHIDVTKIKDLLITHTHPDHFNVGELHNRVRNFAFNVEHPMYIYGSDK 109 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + DR I+ +P + + P++ H + Sbjct: 110 AINGCLNG---IVDLTPDRFNLSIL---------IPFVTITTSSGAKITPLIANHEKWEM 157 Query: 174 LGFRF-----GNVAYCTDVNAFPAESLEKLQN--LDFLIIDAL----KNGLHSSHFSLSE 222 F + Y D + + L+N +D ++++ +N ++H S+ Sbjct: 158 CYIYFIEKNGKTLLYGHDSGYYGDLTWNWLENKKIDLIVLECTYGYRQNDKTNNHMSIET 217 Query: 223 SLKKIELINP-----KNA-ILT-HMHVD--LDYDMVLKST-PSRVVPAFDGM 264 + + + ILT H DY +++ P ++ A+DG+ Sbjct: 218 VINMKQKFKENNNLSQQTQILTSHHSHSCGFDYQSLVEIFKPHQIEVAYDGL 269 >gi|281358144|ref|ZP_06244628.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281315517|gb|EFA99546.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 282 Score = 99.4 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 93/290 (32%), Gaps = 39/290 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG AS +P + + C + R + +VD GPD Sbjct: 1 MRLQFLGSAASESIPALWCECENCRKA-----ARLGGRNLRRRTAYLVGDHTLVDFGPDA 55 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q R ++ +L TH H DH ++ L F RP+ ++ ++ L Sbjct: 56 NWQAKEFRLDPSKVERLLVTHSHVDHFSPVELLWRSRNFSAVNRPLRLFCNEAVLRELEN 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS-LGFRFG 179 ++ + V +E + G +E +PI HG L F Sbjct: 116 R----VRSCGMGSGAADVR---VEPVPLRPGAPVTDGALEILPIRASHGEGECALNFLLS 168 Query: 180 ----NVAYCTDVNAFPAESLEKLQN--LDFLIIDALKNGLHS------SHFSLSESLKKI 227 N+ D +P ES E ++ LD +I+ H ++ Sbjct: 169 EAGRNILIANDTGWWPPESWELVRGRKLDAAVIEMSMGIRLPYAFERGKHLGAQAAIAFR 228 Query: 228 ELINP-------KNAILTHMHVDLD--YDMVLKST-PSRVVPAFDGMQFS 267 + + +TH+ + ++ + + P + +DG+ Sbjct: 229 DRLAELGAVDSSTRVAMTHISHHVGATHEELEEYFRPCGIEVGYDGLILE 278 >gi|281358397|ref|ZP_06244879.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281315224|gb|EFA99255.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 271 Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 56/287 (19%) Query: 11 GCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 G G ++G+P + C K RR+R+ + V D GPD MQ Sbjct: 7 GSGDAVGIPGLFCRCPVCVSARENGGKERRSRTGYLL--------GDAVKFDFGPDTAMQ 58 Query: 68 V--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDCMKHLFESF 122 L + + + TH H+DH G + L L P + +Y + +K L Sbjct: 59 ARELGFDLTKLRRIFITHSHSDHF-GAEELWNQTLGVSAPEQIVTLYGNTEVLKQLA--- 114 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG-- 179 Y R + + ++ + + + I I H L + Sbjct: 115 PY-------RNFGITLQTQLLRSGE-----TVSFDGIRVTAIATDHIPTEECLMYLIETP 162 Query: 180 --NVAYCTDVNAFPAESLEKLQN--LDFLIIDA---LKNGLHSSHFSLSESLKKIELINP 232 NV D + FP + L+N +D + IDA +++ H H L + + + Sbjct: 163 GKNVLIANDSDRFPESAFALLKNRRVDHIFIDATWGVEHREHQGHMGLPAIREIVARLR- 221 Query: 233 KNAILT--------HMHV---DLDYDMVLKSTPSR--VVPAFDGMQF 266 + LT H+ L + + ++DG+ Sbjct: 222 RQNTLTPESHIWAVHVSHLAAPLPCTKFPAALDDNPCMEWSYDGLTV 268 >gi|221061781|ref|XP_002262460.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] gi|193811610|emb|CAQ42338.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium knowlesi strain H] Length = 467 Score = 98.7 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 18/122 (14%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQNL---DFLIIDALKN 211 I IP QHGR +G+ G+ + Y +D + P LE ++ + + LIIDAL Sbjct: 342 IRFIPF--QHGRNYVCVGYIIGDNEKLVYISDCSYIPPSLLEYIKKIGSTEVLIIDALYY 399 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-------DMVLKSTPS-RVVPAFD 262 H SHFSL ES+K LI PK M D+++ + P A D Sbjct: 400 KAKHYSHFSLHESIKIALLIKPKKVYFIGMSCDIEHYITNLFLKKLSNKYPDISFSLAHD 459 Query: 263 GM 264 G+ Sbjct: 460 GL 461 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 26/134 (19%) Query: 22 TGDWGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL---- 74 C + KN+R S+ + + +++ V++D G F +LR + Sbjct: 84 GLKCYTCYDALNGDSKNKRNNISVLV-----KSNDSYVLIDVGKTFRDSLLRNKDKINFY 138 Query: 75 --SIDAVLYTHPHADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFE 120 +D+VL +H H D ++GID LR Y+ K PID+Y + L Sbjct: 139 EIKLDSVLISHSHTDALNGIDDLRDLQEYNKITIGDSYYYTPKNPIDIYLNSVSYERLRN 198 Query: 121 SFRYCFKALDDRTY 134 + Y K + + Sbjct: 199 GYEYLVKKRKENIF 212 >gi|301058185|ref|ZP_07199235.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447687|gb|EFK11402.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 282 Score = 98.7 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 104/299 (34%), Gaps = 52/299 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 TILG G +P+ C K R+ ++ I + +++DT Sbjct: 1 MEITILGSGGCTVIPKPLCPCDICREARQKGVPYARSGPAVFI-------HDENLLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGI-------DGLRGYFLKQKRPIDVYAAPDC 114 + Q+ + ++ S+ +++TH DH+ GI R + + + I + Sbjct: 54 AEIGRQLNQNRIDSLQHLMFTHLDPDHVEGIRVVEQIALDFRDWRAYENKRITLLLPEPL 113 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + +F + LD V +P + G + + I G+ Sbjct: 114 DRDIFRLKSFYGSLLDFYQRQGYVKC-------IPFKHQIKIGEMRILGIPVDRGQQMVF 166 Query: 175 GFRFG----NVAYCT-DVNAFPAESLEKLQNLDFLII------DALKNGL--HSSH---- 217 + + Y D+ FP + ++Q L+I LK+G +H Sbjct: 167 IYVVEKAGRKLVYAPCDIRPFPE-TRSEVQGAHLLVIQPGIFETGLKHGFTYPKNHISRT 225 Query: 218 --FSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ ++L + I + + H+ D DY + + V A DGM+ + Sbjct: 226 TLYTFEQTLALAKRIAAQQVLFVHLEEYWNRGYD-DYSAIEREYKD-VRFAHDGMRVNL 282 >gi|315647117|ref|ZP_07900230.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315277319|gb|EFU40648.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 244 Score = 98.7 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 86/234 (36%), Gaps = 29/234 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID--GLRGYFL----KQ 102 R +++ V++D G ++ E + +DAV TH HADH + L K+ Sbjct: 25 RHADSAVLLDCGSGVLSRLQNEINLEQLDAVFITHTHADHFADVYALEFSALVLTQLGKR 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 RP+DVY + + L F D PI + ++ + Sbjct: 85 TRPLDVYIYGENLASLN------FAYPDYVHVHPIEPARTVNVGELMFSFSETVHEVPCC 138 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHF 218 I R + G+ YC+ +E +N D L+++ ++ G+ H Sbjct: 139 AIKATT-REGANLIYSGDTGYCSSF-------IEFAENADLLVLECSLYDVQKGVLDGHL 190 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + E+ + L N ILTH D + + A+ G+++S Sbjct: 191 TAGEAGEIARLANAGYLILTHFPHYGDQRQLAMEAARNYSGPIELAYSGLKWSF 244 >gi|270489167|ref|ZP_06206241.1| putative phosphonate metabolism protein PhnP [Yersinia pestis KIM D27] gi|270337671|gb|EFA48448.1| putative phosphonate metabolism protein PhnP [Yersinia pestis KIM D27] Length = 136 Score = 98.3 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDFL 204 G + P+ H +I + G+ + +AY TD A+S L +++D L Sbjct: 10 FQPLQFGELRVTPVPLVHSKI-TFGYLLQSPNRAIAYLTDTVGLSADSALFLASKSIDLL 68 Query: 205 IIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 ++D ++ +H ++ +L +L+ P+ +LTH LD ++ S P+ V A+ Sbjct: 69 VLDCSHAPQSPPPRNHNDVTMALAIRDLLMPEETLLTHASHQLDRWLLNNSLPTGVSVAY 128 Query: 262 DGMQFSS 268 D + Sbjct: 129 DNQTVTL 135 >gi|156095751|ref|XP_001613910.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802784|gb|EDL44183.1| hypothetical protein, conserved [Plasmodium vivax] Length = 470 Score = 98.3 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 18/122 (14%) Query: 159 IEAIPILQQHGR-ISSLGFRFG---NVAYCTDVNAFPAESLEKLQNL---DFLIIDALKN 211 I IP QHGR +G+ G + Y +D + P LE ++ + + L+IDAL Sbjct: 345 IRFIPF--QHGRNYICVGYIIGENEKLVYISDCSYLPPNVLEYIKKVGPTEVLVIDALYY 402 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-------DMVLKSTPS-RVVPAFD 262 H SHFSL ES+K LI PK M D+++ + P A D Sbjct: 403 KAKHYSHFSLHESIKIALLIKPKKVYFIGMSCDIEHYITNLFLKKLSNKYPDISFSLAHD 462 Query: 263 GM 264 G+ Sbjct: 463 GL 464 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 26/131 (19%) Query: 25 WGACDPT---NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL------S 75 C N KN+R + + + +++ V++D G F +LR + Sbjct: 87 CYTCYDALNGNSKNKRNNICVLV-----KSNDSYVLIDVGKTFRDSLLRNKDKINFYEIK 141 Query: 76 IDAVLYTHPHADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFR 123 +D+VL +H H D ++GID LR Y+ K PID+Y + L + Sbjct: 142 LDSVLISHSHTDALNGIDDLRDLQEYNKITKGDSYYYTPKNPIDIYVNAVSYERLRNGYD 201 Query: 124 YCFKALDDRTY 134 Y K + + Sbjct: 202 YLVKKRKENIF 212 >gi|237703681|ref|ZP_04534162.1| carbon-phosphorus lyase complex accessory protein [Escherichia sp. 3_2_53FAA] gi|226901593|gb|EEH87852.1| carbon-phosphorus lyase complex accessory protein [Escherichia sp. 3_2_53FAA] Length = 161 Score = 97.5 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 25/176 (14%) Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I VY PD + FK + V P V+ G ++ Sbjct: 1 MGDTIPVYGPPD-----EQGCDDLFKHPGLLDFSHTVEPFVV--------FDLQG--LQV 45 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KNG 212 P+ H ++ + G+ VA+ +D P ++L+ L+N ++ID + Sbjct: 46 TPLPLNHSKL-TFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPRED 104 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H L+ L ++I ILTH+ D ++ + PS FDGM Sbjct: 105 APRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENALPSGFEAGFDGMDIEV 160 >gi|297623458|ref|YP_003704892.1| beta-lactamase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164638|gb|ADI14349.1| beta-lactamase domain protein [Truepera radiovictrix DSM 17093] Length = 247 Score = 97.1 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 90/277 (32%), Gaps = 46/277 (16%) Query: 6 HFTILGCGA---SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LGCG S G R + + S ++D G Sbjct: 3 SLTFLGCGDAFSSGG-------------------RFNTCFLVEAPS-----AHFLIDFGA 38 Query: 63 DFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKH 117 + R V + + TH H DH+ G+ L K+ P+ + P H Sbjct: 39 SSLAALKRAGRSVRDLPLIFITHLHGDHVGGLPFLLLEASLVDKRTAPLTIAGPPGLKAH 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGF 176 L + F + + P + ++P ++ G + P +H + + G Sbjct: 99 LPKLIEALFPGTELQL------PFELSVLELPPDVRGEVGGVTVTPYQVEHAKPLVCTGL 152 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELIN 231 RF +AY D PA S ++ D + DA + H + + + Sbjct: 153 RFELGGKVLAYSGDTVWTPALS-RLARDADLFVCDAYTFDQSTPQHLDYATLKARYGELG 211 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 K +LTH+ + + A DG++ + Sbjct: 212 CKRLVLTHLGRAF-LERLGAGEALEFEVAHDGLEVTF 247 >gi|317064736|ref|ZP_07929221.1| pyrroloquinoline quinone biosynthesis protein PqqB [Fusobacterium ulcerans ATCC 49185] gi|313690412|gb|EFS27247.1| pyrroloquinoline quinone biosynthesis protein PqqB [Fusobacterium ulcerans ATCC 49185] Length = 306 Score = 97.1 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 102/298 (34%), Gaps = 56/298 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRR--TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G+P+I C R+ ++++ I + +++ P F Sbjct: 27 FLGTAQDGGIPQIGCKCEMCTEIRAGKRKEVLQAAIGIENTE---TGNRYMIEATPSFSK 83 Query: 67 Q---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q + ++ +D + TH H H G+ L L K + VY + + L Sbjct: 84 QYQSFIADENGKLDGIFLTHAHMGHYTGLMFLGREALNSKE-VKVYVSKKMAEFLR---- 138 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRI--SSLGFRF-- 178 ++ + +V IE + + I+ IP+ H + GF Sbjct: 139 ------NNAPWSQLVKLKNIELVEFESGKELVLDNDIKIIPVEVPHRNEFADTHGFIIKG 192 Query: 179 -GNVAYCTDVN---AFPAESLEKLQNLDFLIIDALKNG---------------LHSSHFS 219 + + D++ F + + + D+L +DA H + Sbjct: 193 EKSFFFVPDIDSWEGFEDQLNDIFKQCDYLAVDATFYTKEEIGNIRGRNFKEIPHPT--- 249 Query: 220 LSESLKKIEL----INPKNAILTHMHVDLDYDMVLKSTPSRVV-----PAFDGMQFSS 268 + E++K IE + K ILTH + + K +V + DGM+ + Sbjct: 250 VEETIKFIEENNWNLKDKKIILTHFNHT-NLLFTNKELREKVEKSEIMISEDGMKITL 306 >gi|257470529|ref|ZP_05634619.1| coenzyme PQQ synthesis protein B [Fusobacterium ulcerans ATCC 49185] Length = 286 Score = 97.1 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 102/298 (34%), Gaps = 56/298 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRR--TRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G+P+I C R+ ++++ I + +++ P F Sbjct: 7 FLGTAQDGGIPQIGCKCEMCTEIRAGKRKEVLQAAIGIENTE---TGNRYMIEATPSFSK 63 Query: 67 Q---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q + ++ +D + TH H H G+ L L K + VY + + L Sbjct: 64 QYQSFIADENGKLDGIFLTHAHMGHYTGLMFLGREALNSKE-VKVYVSKKMAEFLR---- 118 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRI--SSLGFRF-- 178 ++ + +V IE + + I+ IP+ H + GF Sbjct: 119 ------NNAPWSQLVKLKNIELVEFESGKELVLDNDIKIIPVEVPHRNEFADTHGFIIKG 172 Query: 179 -GNVAYCTDVN---AFPAESLEKLQNLDFLIIDALKNG---------------LHSSHFS 219 + + D++ F + + + D+L +DA H + Sbjct: 173 EKSFFFVPDIDSWEGFEDQLNDIFKQCDYLAVDATFYTKEEIGNIRGRNFKEIPHPT--- 229 Query: 220 LSESLKKIEL----INPKNAILTHMHVDLDYDMVLKSTPSRVV-----PAFDGMQFSS 268 + E++K IE + K ILTH + + K +V + DGM+ + Sbjct: 230 VEETIKFIEENNWNLKDKKIILTHFNHT-NLLFTNKELREKVEKSEIMISEDGMKITL 286 >gi|168705836|ref|ZP_02738113.1| hypothetical protein GobsU_40262 [Gemmata obscuriglobus UQM 2246] Length = 128 Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 24 DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTH 83 D C NP+N R R S+ +S + +++DT P+ +Q+LRE V + AV YTH Sbjct: 1 DCHVCTSDNPRNHRYRCSVLVS-----NAQGNLLIDTAPEMRLQLLRENVKLVHAVAYTH 55 Query: 84 PHADHIHGIDGLRGYF 99 H DH+ G+D + Y Sbjct: 56 YHVDHLFGLDDVLCYQ 71 >gi|238604131|ref|XP_002396125.1| hypothetical protein MPER_03707 [Moniliophthora perniciosa FA553] gi|215468078|gb|EEB97055.1| hypothetical protein MPER_03707 [Moniliophthora perniciosa FA553] Length = 131 Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 20/125 (16%) Query: 4 YYHFTILGCGASLGVPRITG--------DWGACDPT----NPKNRRTRSSLKISRVSERG 51 +G G S +P + C T KN R +S + + Sbjct: 7 TTELIFVGTGTSSSLPNVNCLTQPPDGKQCKTCLSTLAPEGKKNVRRNTSAVVRIDGKDD 66 Query: 52 SNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--- 104 T+++D G F + + ++ IDA+L TH HAD ++G+D LR K Sbjct: 67 RKITIVIDAGKTFQAAAVEWFPKFKLRRIDALLLTHAHADAMNGLDDLRVLARWAKAYSE 126 Query: 105 -PIDV 108 IDV Sbjct: 127 SHIDV 131 >gi|237835551|ref|XP_002367073.1| hydrolase-like protein [Toxoplasma gondii ME49] gi|211964737|gb|EEA99932.1| hydrolase-like protein [Toxoplasma gondii ME49] gi|221506254|gb|EEE31889.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 775 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%) Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG---NVAYCTDVNAFPAESL 195 P I ++ ++ G + HG + SLGF G + Y +DV +FP L Sbjct: 618 PKHIADDAGFSTLQIPGVSVPIHSFPVFHGGVYVSLGFLVGAREKLVYISDVTSFPPPVL 677 Query: 196 EKLQ---NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +L+ +++ L++DA+ LH++HFSL E+L L+ P+ M L++ + Sbjct: 678 RRLRQIPDIETLVVDAIGEKLHNAHFSLQEALALAVLLQPRKVFFVGMSCSLEHRKTNRR 737 Query: 253 TP--------------------SRVVPAFDGM 264 V A DG+ Sbjct: 738 LALWLRRHREVYVEREGRESRIENVSLAVDGL 769 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 16/102 (15%) Query: 22 TGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQV 73 +C +NRR S + +++D G F L Q+ Sbjct: 257 GVSCVSCFLCWKNEQDENRRNNVSAVLRIAG-----KRILIDCGKTFRQAALAYFPLHQI 311 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 ++DAVL TH H D + GID LR + P Sbjct: 312 TTLDAVLLTHDHQDAVGGIDDLRDLQRFTR---PALLPPTTA 350 >gi|86751719|ref|YP_488215.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gi|86574747|gb|ABD09304.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 244 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 94/278 (33%), Gaps = 48/278 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG +LG R + + G ++D G Sbjct: 1 MQLRFVGCGDALG----------------SGGRLNTCFHV-----AGERVNFLIDCGATS 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGID----GLRGYFLKQKRPIDVYAAPDCMKHL 118 + R + +D VL TH H DH G+ + K+KRP+ + P L Sbjct: 40 LPALKRYGISRDALDLVLITHFHGDHFGGLPFLLLDAKSA--KRKRPLVIAGPPGIDIRL 97 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGF 176 F+ P + VI + + G + A P HG + Sbjct: 98 TRVMEALFEH--SSATQPTFDLQVIALDP---TVPRTFGAVTATPFPVIHGDSGGPFYAY 152 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKK-IELI 230 R +AY D + + D I +A + +H SL +L+ + I Sbjct: 153 RIEAEGRTLAYSGDTQW-TDTLVAAAHDADLFIAEAYTYDRNVKNHLSLK-ALETHLPEI 210 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 NPK ILTHM D+ + + + P + A DG+ Sbjct: 211 NPKRLILTHMGDDVLHKL--DTVPH--MAASDGLIVEL 244 >gi|221485392|gb|EEE23673.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 775 Score = 96.0 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%) Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRFG---NVAYCTDVNAFPAESL 195 P I ++ ++ G + HG + SLGF G + Y +DV +FP L Sbjct: 618 PKHIADDAGFSTLQIPGVSVPIHSFPVFHGGVYVSLGFLVGAREKLVYISDVTSFPPPVL 677 Query: 196 EKLQ---NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +L+ +++ L++DA+ LH++HFSL E+L L+ P+ M L++ + Sbjct: 678 RRLRQIPDIETLVVDAIGEKLHNAHFSLQEALALAVLLQPRKVFFVGMSCSLEHRKTNRR 737 Query: 253 TP--------------------SRVVPAFDGM 264 V A DG+ Sbjct: 738 LALWLRRHREVYVEREGRESRIENVSLAVDGL 769 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 21/110 (19%) Query: 14 ASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 S GV +C +NRR S + +++D G F L Sbjct: 254 GSHGV-----SCVSCFLCWKNEQDENRRNNVSAVLRIAG-----KRILIDCGKTFRQAAL 303 Query: 70 R----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ ++DAVL TH H D + GID LR + P Sbjct: 304 AYFPLHQITTLDAVLLTHDHQDAVGGIDDLRDLQRFTR---PALLPPTTA 350 >gi|288870464|ref|ZP_06114185.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288867094|gb|EFC99392.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 276 Score = 95.2 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 50/295 (16%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVI 57 M+D + G GAS P + C KN R R+S I + ++ Sbjct: 1 MEDTMKLQLNGTGASEAFPSLFCTCKYCTEARELGGKNLRRRTSSCI--------DEKIL 52 Query: 58 VDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAP 112 +D D Y + V I ++ TH HADH D L + ++ P +Y Sbjct: 53 IDFSADTYALSTQAHVDLSKIHHLIVTHSHADHFFPTDFHYLLPPFCIE-PHPFTIYGNS 111 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRI 171 K E + R +++ ++ ++ + + P+ H + Sbjct: 112 SVHKKFKE---------EHRDNAALLSH--VKFCELTGGVPFFIDDYKITPVSTLHDAKE 160 Query: 172 SSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDA--LKNGLH-SSHFSLSE 222 + + Y D FP E+ L +++D ++ G H +H L + Sbjct: 161 DCFIYIVEKDSRELLYAHDSTFFPEETWRHLSSHRFSLVVLDCTSIEVGHHFPNHMGLPD 220 Query: 223 SLKKIELINPK-------NAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQF 266 ++ E + + ++TH ++ L T + + AFDGM Sbjct: 221 NILVKERMQKEGMANENTRFVITHFAHTFNPLHEHTDSLART-NGFIAAFDGMVL 274 >gi|313679099|ref|YP_004056838.1| hypothetical protein Ocepr_0202 [Oceanithermus profundus DSM 14977] gi|313151814|gb|ADR35665.1| hypothetical protein Ocepr_0202 [Oceanithermus profundus DSM 14977] Length = 312 Score = 95.2 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 96/292 (32%), Gaps = 57/292 (19%) Query: 9 ILGCGASLGVPRITGDWGAC---DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG S P+ C + RT SL + +++DT + Sbjct: 5 VLGSAGSQPTPKAGCGCRLCALARREGGRAVRTGPSLYL-------PEADLLIDTPEEAN 57 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 Q+ + + V +TH H DH G+ ++ RP++ + L E Y Sbjct: 58 QQLTGHDL-APRRVAWTHAHPDHAAGLRVVQFLAQASGRPVEGWLPRPLYPVLAER--YP 114 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 L D Y +E + VP G I P+ + F AY Sbjct: 115 LDHLVDAGY--------LELHLVPPGRPFELGGIRVTPL--------AHAFEEPVFAYLF 158 Query: 186 DVNAF-----PA--ESLEKLQNLDFLI--------IDALKNGLHSSH------FSLSESL 224 + + P SL + +DAL L H ++ E+L Sbjct: 159 ETDRVRGLYAPDHLRSLPLPEGPLDWAVVQMPIPPLDALPFELPPEHEAWRTFYTFDEAL 218 Query: 225 KKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSSPIP 271 + + + + TH++ + + D V V A DGM+ +P P Sbjct: 219 E-VWRGRARRLVFTHVYESVRMTPEELDAVAARAGEWVRFAHDGMEV-APEP 268 >gi|124806602|ref|XP_001350768.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] gi|23496896|gb|AAN36448.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] Length = 438 Score = 94.4 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 18/122 (14%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQN---LDFLIIDALKN 211 I IP HG+ +G+ GN + Y +D + P LE ++ +D LIIDAL Sbjct: 313 IRFIPF--HHGKNYICIGYIIGNTNKLVYISDCSKLPNYILEYIKKMGSIDILIIDALFY 370 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-------DMVLKSTPS-RVVPAFD 262 H SHFSL ES+ I PK M D+++ + + A D Sbjct: 371 KRKHYSHFSLYESINIALQIKPKQVFFIGMSCDIEHNITNLFLEKLSAKYSDITFSLAHD 430 Query: 263 GM 264 G+ Sbjct: 431 GL 432 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 18/113 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL------SIDAVLYTHPHADHIHGIDGLRG------ 97 + +++ V++D G F +LR + ++ +VL +H H D ++GID LR Sbjct: 111 KSNDSYVLIDVGKTFRDSILRNKDKINFYKINLHSVLISHSHTDALNGIDDLRDLQEFNK 170 Query: 98 ------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 Y+ K+ DVY L + Y + + + + I Sbjct: 171 VQYDDVYYYTPKKIFDVYVNDVSYDRLRRGYDYLVHKRTENIFYSKIAALNIH 223 >gi|221133418|ref|ZP_03559723.1| pyrroloquinoline quinone biosynthesis protein PqqB [Glaciecola sp. HTCC2999] Length = 306 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 99/319 (31%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG GA GVP+ C K RT+SS+ +S + V+++ Sbjct: 1 MYILILGSGAGGGVPQWNCHCDNCAGCRNKTLPVRERTQSSIAVSSNRKDW----VLINA 56 Query: 61 GPDFYMQVLREQV----------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q+ + + +I +++ T DH G+ L++ P+ VY Sbjct: 57 SPDIRQQINQSPLLWPADGQQRGTAIKSIILTDSQIDHTTGL-----LTLREGLPLPVYC 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L +F F L + + I P + P++ + Sbjct: 112 TDVVYEDLSTAFP-VFPMLKH--WHGGLQRRAIGTTHEPGFQVEGVAGLTFHPVVLESNA 168 Query: 171 ISSLGFRFGNVA-------------------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 +R N+ Y L+ + D Sbjct: 169 PPYSKYR-DNIVDGNNIGLQIVDNATGKSVFYAPGCVQASDLVKNMLEQSSCALFDGTLW 227 Query: 210 ------------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVD---LDYDMVLK 251 + G H + ++ ++ + + IL H++ LD Sbjct: 228 LDDEMIQKGFSNRLGSQMGHMPVNGPDGTVALLQEYDIERKILIHINNTNPVLDESSTAN 287 Query: 252 ST--PSRVVPAFDGMQFSS 268 + + + A+DGMQ + Sbjct: 288 AYLRDNGIELAYDGMQITI 306 >gi|222625443|gb|EEE59575.1| hypothetical protein OsJ_11872 [Oryza sativa Japonica Group] Length = 172 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%) Query: 111 APDCMKHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +P + F Y K D+ + ++ +IE D+ S+G +E +P+ Sbjct: 15 SPTVSGNTAARFPYLVKYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSG--LEFVPLPV 71 Query: 167 QHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNGLHSSH 217 HG LGF FG +AY +D+ F ++ + LD LI++A N LH Sbjct: 72 MHGEGYVCLGFLFGRKARIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLH--- 126 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 E+L ++ I+PK A+LT M +++Y + Sbjct: 127 ---GEALDAVKRISPKRALLTGMAHEIEYYKENQKLAE 161 >gi|55379432|ref|YP_137282.1| ATP-binding protein PhnP [Haloarcula marismortui ATCC 43049] gi|55232157|gb|AAV47576.1| ATP-binding protein PhnP [Haloarcula marismortui ATCC 43049] Length = 291 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 83/278 (29%), Gaps = 70/278 (25%) Query: 23 GDWGACDPTNPKNRRTRSSLKISRVSERGS---------------NTTVIVDTGPDFYMQ 67 D C+ + R++++ + G +++VD PDF Q Sbjct: 19 CDCDTCERARDPDEELRANVRERGIDPTGGVERSRFSVAVENDTTGESLLVDLSPDFRHQ 78 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC--------MKHLF 119 LRE V DA + TH H DH+ G+ G + + V+AA + + + Sbjct: 79 FLRESVPLPDAAIITHIHFDHLDGL----GNAYRLFDELPVHAADETDPVTDESVAEAVR 134 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + Y ++ + + AG + +P+ H + G R Sbjct: 135 SRYDY-------------LDTVSVHAQTPLEPFTVAGFEVTLVPV--THPPLLCYGLRIE 179 Query: 180 N------VAYCTDVN-AFPAESLEKLQNLDFLII---------------------DALKN 211 ++ D P S L D ++ D + Sbjct: 180 EPQTGAVLSISGDTCYDVPDRSKSVLTGADLALVEGIVHPEACEYHPKGGTHHNEDGVPR 239 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + H +L + I + + H + D Sbjct: 240 TFGTKHMTLPGARDFAADIEADDYRIVHTAHYVPADRA 277 >gi|39933875|ref|NP_946151.1| beta-lactamase-like protein [Rhodopseudomonas palustris CGA009] gi|192289294|ref|YP_001989899.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] gi|39647722|emb|CAE26242.1| Beta-lactamase-like [Rhodopseudomonas palustris CGA009] gi|192283043|gb|ACE99423.1| beta-lactamase domain protein [Rhodopseudomonas palustris TIE-1] Length = 244 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 97/272 (35%), Gaps = 44/272 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG ++G R + +S G + ++D G Sbjct: 1 MQVRFVGCGDAIG----------------SGGRLNTCFHVS-----GQSVNFLIDCGATS 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + R +L +D +L TH HADH G+ L F+K+KRP+ + L Sbjct: 40 LPALRRYGILREDLDLILITHFHADHFGGLPFMMLDAQFMKRKRPLVIAGPLGIDIRLTR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 F+ P + V+ + G + P HG +R Sbjct: 100 LMEAMFEY--SSATKPNFDLQVLALEP---AVTRQFGAVTVTPFPVVHGDSGGPFFAYRI 154 Query: 179 GN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKK-IELINP 232 +AY D + + + D I +A +H SL +L+ + INP Sbjct: 155 EAEGRILAYSGDTQW-TDQLVAAAHDADLFICEAYTYERTVKNHISLK-ALETHLPEINP 212 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 K ILTHM ++ + + + P + A DG+ Sbjct: 213 KRVILTHMGDEVLHKL--DTVPH--MAASDGL 240 >gi|76801768|ref|YP_326776.1| PhnP-like protein [Natronomonas pharaonis DSM 2160] gi|76557633|emb|CAI49216.1| PhnP-like protein [Natronomonas pharaonis DSM 2160] Length = 274 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 76/214 (35%), Gaps = 29/214 (13%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 C + R+R S+ + + +++VD PDF Q L V DA++ Sbjct: 19 CKCETCQRARERGVERSRFSVHV---HNDRTGESLLVDASPDFRSQFLSNDVDLPDAIVI 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 +H H DH+ G+ G + + V+AA + ES D ++ I Sbjct: 76 SHIHFDHLDGL----GNAYRLLEDVPVFAADEVDPATGESVAETVGDKYDY-----LDAI 126 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVN-AFPAES 194 +E ++ G + +P+ +H + G + +A D N A S Sbjct: 127 TVEPRSPFEPFETCGFEVTLVPV--EHPPLVCYGLHIEDPETGATLALSGDSNYAIDDAS 184 Query: 195 LEKLQNLDFLIIDALKN----GLHSS---HFSLS 221 + L+N D D + H + H Sbjct: 185 RDVLRNPDLFFADGIVPAAYCEYHPAGGDHADAD 218 >gi|288932766|ref|YP_003436826.1| ribonuclease Z [Ferroglobus placidus DSM 10642] gi|288895014|gb|ADC66551.1| ribonuclease Z [Ferroglobus placidus DSM 10642] Length = 302 Score = 94.0 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 100/321 (31%), Gaps = 79/321 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S VP + R SS+ ++ + ++ D G Sbjct: 3 LKVTFLGT--SGTVPSVD--------------RNTSSILLNYSGCK-----ILFDCGEGT 41 Query: 65 YMQVLREQVL-SIDAVLYTHPHADH---IHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLF 119 Q+++ + +I+A+ TH H DH + G+ +++P+ +Y ++ LF Sbjct: 42 QRQMMKAKTGFNIEAIFITHLHTDHFIGVFGLLETMSLN-SREKPLSIYTPNSKFLRKLF 100 Query: 120 ESFRYC---------------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA--- 161 F Y F ++ ++E+ G Sbjct: 101 REFGYHNLGFPVRVVGLRDGDFVRFENFKVLAFKTDHIVESLGYAFVEDERRGKFNVEKA 160 Query: 162 ----IPILQQHGRISS-LGFRFG-----------------NVAYCTDVNAFPAESLEKLQ 199 IP + +++ FG V Y D + +E + Sbjct: 161 RELGIPPGPLYSKLARGEAIEFGEKIITPDMVLGEKRPGWKVVYTGDTAPV-EKLVEIAK 219 Query: 200 NLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYD-----M 248 N D LI DA + H + ++ + + N K +LTH+ + Sbjct: 220 NADLLIHDAAFTSELDDWAKETKHSTARDAAEIAKKANVKKLVLTHISARYSKEPEKLLE 279 Query: 249 VLKSTPSRVVPAFDGMQFSSP 269 K VV A D M+ Sbjct: 280 EAKKIFENVVVAEDFMEIELE 300 >gi|295698857|ref|YP_003606750.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1002] gi|295438070|gb|ADG17239.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1002] Length = 304 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 109/317 (34%), Gaps = 66/317 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRRGTVKATRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDLLAQIAAHPELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLYAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI------L 165 + L F A Y + + + + G I+A+P+ Sbjct: 113 DAVWQDLRSGFP---VAPILSHYCGVEHRRIALDGAPLAVDALPGIRIDALPLSSKAPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 H G G V Y + L ++ D L++D Sbjct: 170 SPHREAPERGDNIGLVLTNLQSGQRVFYAPGLGVIEPHVLAAMREADLLLVDGTLWTGDE 229 Query: 209 -LKNGLHSSHF----SLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 ++ GL L +S ++ ++ +N K +L H++ ++++ P Sbjct: 230 MIRLGLSKKTSADMGHLPQSGAGGMIETLDSLNAKRKVLIHINNTNP--ILIEDGPERRM 287 Query: 256 ----RVVPAFDGMQFSS 268 + A+DGM F Sbjct: 288 LGEHGIEVAYDGMSFEL 304 >gi|73669295|ref|YP_305310.1| ribonuclease Z [Methanosarcina barkeri str. Fusaro] gi|72396457|gb|AAZ70730.1| RNAse Z [Methanosarcina barkeri str. Fusaro] Length = 305 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 104/323 (32%), Gaps = 81/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G SL PT +N S++ ++R E ++ D G Sbjct: 2 LRITFLGTGGSL-------------PTRNRN---PSAVMVNREGEL-----ILFDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMK---- 116 Q++R ++++ ++ +H HADH GI GL F+ +K P+ +Y + Sbjct: 41 QQQMMRAKTGMMNLSSIFVSHFHADHFLGIPGLIQTMSFMGRKEPLLIYGPEGTREFTEL 100 Query: 117 ---------------------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + E Y +AL + +IEN + Sbjct: 101 FKALGYFNLNYEVQGIQLKPGDVVERKEYVIRALKTEHSISSLGYALIENPRPGRFNREK 160 Query: 156 GGVIEAIPIL-----QQHGRISSLG-----------FRFGN-VAYCTDVNAFP-AESLEK 197 + P Q+ + G R G V Y D P L+ Sbjct: 161 AIELGIPPGPLFSKLQKGKTVEVNGKLVKPEDVMGALRPGRTVVYSGDTR--PCEPILKA 218 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDMV 249 ++ D LI D S H + E + + ILTH+ D + + Sbjct: 219 SRDADVLIHDGSFADEMADWAEESKHSTAGEVAALAKEAGVRRLILTHISSRYTDDAEPL 278 Query: 250 ---LKSTPSRVVPAFDGMQFSSP 269 K V+ A D M+ P Sbjct: 279 LIDSKKVFENVIIAEDLMEIEVP 301 >gi|90422274|ref|YP_530644.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90104288|gb|ABD86325.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 244 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 61/278 (21%), Positives = 91/278 (32%), Gaps = 48/278 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG + G R + +S G ++D G Sbjct: 1 MQLRFVGCGDAFG----------------SGGRLNTCFHVS-----GEQVNFLIDCGASS 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + R + ID VL TH HADH G+ L F K+KRP+ + P L Sbjct: 40 LPALKRYGILRDDIDLVLITHFHADHFGGVPFLLLEAQFGKRKRPLVIAGPPGIELRLTR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 F+ ++ + IE N+ G ++ HG +R Sbjct: 100 LMEAMFEHSSSTKQHFELSVVAIEPNETR-----EFGAVKVSAFPVVHGDSGGPFHAYRI 154 Query: 179 G----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPK 233 +AY D + + D LI +A +H SL + INP+ Sbjct: 155 EAEGRTLAYSGDTQW-TETLVGAGHDADLLIAEAYTYDRPVKNHLSLKTLETHLPEINPR 213 Query: 234 NAILTHMHVDLDYDMVLKST---PSRVVPAFDGMQFSS 268 ILTHM D +L+ P A DG+ Sbjct: 214 RLILTHMS-----DEMLRKLDAVPH--TAASDGLIVEL 244 >gi|222480949|ref|YP_002567186.1| PhnP-like protein [Halorubrum lacusprofundi ATCC 49239] gi|222453851|gb|ACM58116.1| PhnP-like protein [Halorubrum lacusprofundi ATCC 49239] Length = 275 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 87/270 (32%), Gaps = 47/270 (17%) Query: 23 GDWGACDPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLY 81 D C + R+R S+ + + + +++VD PDF Q L V DA + Sbjct: 19 CDCDTCAAARERGVSRSRFSVHV---ANERTGESLLVDFSPDFRSQFLDNDVPLPDAGIV 75 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 TH H DH+ G+ G + + V+A + ES Y + + I Sbjct: 76 THIHFDHLDGL----GNVYRLVDGLPVHAPSETDPATDES----VAETIRSKYDYLEDRI 127 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVN-AFPAES 194 + + D +S G + +P+ H + G + ++ D + P S Sbjct: 128 GVHSRDPFDPFESCGFEVRFVPVD--HPPLLCYGVVIEDPETGAKLSLTGDTSYDVPERS 185 Query: 195 L----EKLQNLDFLIIDALKNGLHS-----------------SHFSLSESLKKIELINPK 233 + L I+ A H H + +L + ++ Sbjct: 186 RDALADADLLLADAIVPASLCDHHPIGGRHEGPDGVPRTFGSKHMTREGALALADELDAD 245 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 L H+ D + A DG Sbjct: 246 RTRLVHLAHFYPPDEAFEE-----PLAVDG 270 >gi|27376253|ref|NP_767782.1| hypothetical protein bll1142 [Bradyrhizobium japonicum USDA 110] gi|27349393|dbj|BAC46407.1| bll1142 [Bradyrhizobium japonicum USDA 110] Length = 244 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 85/277 (30%), Gaps = 50/277 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG + G R + + G ++D G Sbjct: 1 MQLRFVGCGDAFG----------------SGGRLNTCFHV-----AGREANFLIDCGASA 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFL------KQKRPIDVYAAPDCMK 116 + R ++ ID +L TH H DH G+ + L ++ RP+ + Sbjct: 40 LPALKRLEIDRNDIDLILITHFHGDHFAGL----PFVLLDAQFSRRTRPLTIAGPQGIET 95 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSL 174 L E F+ + ++ + G + P HG L Sbjct: 96 RLREVMEVLFEHSSKTRQR-----FELSVVELASGQRRDFGAVTVTPYPVVHGESGGPFL 150 Query: 175 GFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKIEL 229 +R +AY D + D I +A + +H SL + + Sbjct: 151 AYRVETEGRTLAYSADTEW-TETLIPLAHGADLFIAEAYMYEKVVKNHLSLKTLEQHLPA 209 Query: 230 INPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 I K +LTHM D+ +V + A DGM Sbjct: 210 IGAKRLVLTHMSDDMLSRLVDIEH----LAAEDGMVL 242 >gi|70950037|ref|XP_744375.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524305|emb|CAH79792.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 425 Score = 93.3 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 18/122 (14%) Query: 159 IEAIPILQQHGR-ISSLGFRFGN---VAYCTDVNAFPAESLEKLQN---LDFLIIDALKN 211 I IP QHG+ +G+ GN + Y +D N ++ ++ +D L+IDAL Sbjct: 300 IRFIPF--QHGKNYVCVGYIVGNNHKLVYISDCNYVSTYVVDYIKKFAPIDILVIDALYY 357 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-------DMVLKSTPS-RVVPAFD 262 H SHFSL ES++ LI PK M D+++ + K P A D Sbjct: 358 KSKHYSHFSLYESIQFSLLIKPKQVYFIGMSCDVEHNITNLYLQKLSKKYPDISFSLAHD 417 Query: 263 GM 264 G+ Sbjct: 418 GL 419 Score = 86.3 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 23/128 (17%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL------SIDA 78 N KN+R S+ + + +N+ V++D G F +L +++A Sbjct: 90 CYDALAENSKNKRNNISVLL-----KSNNSYVLIDVGKTFRESILSNNDKINFSEVNLEA 144 Query: 79 VLYTHPHADHIHGIDGLRG------------YFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 VL +H H D ++GID LR Y+ + K+PIDVY L F Y Sbjct: 145 VLISHSHTDAMNGIDDLRDLQEYERVSYGDVYYYRSKKPIDVYLNSVSYDRLRNGFEYLA 204 Query: 127 KALDDRTY 134 K + + Sbjct: 205 KERTENRF 212 >gi|188581202|ref|YP_001924647.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179344700|gb|ACB80112.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 247 Score = 93.3 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 89/274 (32%), Gaps = 37/274 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G R + + S G ++D G Sbjct: 1 MRLQVLGCGDAFG----------------SGGRFNTCFHVD-PSAGGDGDAFLIDCGASS 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 + + R V I +V TH H DH G+ L + RP+ V P + L Sbjct: 44 LIAIRRFGVDPNRIRSVFLTHLHGDHFGGLPWLILDGQLVSGRTRPLTVVGPPGTAERLP 103 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F V + IE ++ AG A + G + R Sbjct: 104 AAMEVLFPGSSTAECRFAVEVVEIEAGR---PVEVAGVTAAAFAMRHPSGA-PAHALRIE 159 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 + V+Y D + + + D +I + H + +++ I PK Sbjct: 160 SAGRVVSYTGDTEWV-EDIVAAGRGADLMIAEGYTVERPVKFHLDWATLKRRLPEIGPKR 218 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ILTHM ++ + P + A DG+ + Sbjct: 219 LILTHMSPEM-----IAHPPDGYIAAEDGLVVAL 247 >gi|261368554|ref|ZP_05981437.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] gi|282569438|gb|EFB74973.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] Length = 277 Score = 93.3 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 94/293 (32%), Gaps = 45/293 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG A+ G P + C +N RTR+ + + +++D Sbjct: 1 MKIRYLGTAAAEGWPALFCSCPICTKARAEGGRNLRTRTQAIL--------DGELLLDFP 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADH---IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 PD Y LR + + +L TH H DH I + ++VY Sbjct: 53 PDTYCHALRYNLELARVHTLLVTHSHMDHWFPTDLIHRHEHFGHGVTGVLEVYGNQAV-- 110 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 ++F +D PI + + +S G I A+P R L + Sbjct: 111 --KDAFD-AHILVDRFKPHPIGDVVHFHVTHGGDRFESHGWQITAVPADHD-KREECLVY 166 Query: 177 RFGNVA----YCTDVN-AFPAESLEKL--QNLDFLIIDAL--KNGLHSSHFSLSESLKKI 227 Y D E+ + + D + +DA K + H L + I Sbjct: 167 ICQKDGKTLFYGHDTGLNLSEEAWALVTARQYDLISLDATMGKKTIGGYHMGLPDVEAMI 226 Query: 228 ELI---------NPKNAILTHMHV--DLDYDMVLK-STPSRVVPAFDGMQFSS 268 + K ++ H ++ +D + ++ A+DGM+ Sbjct: 227 ARLTDAGCIDDHTVK--VINHFSHNGEMTHDELTAWGAQRGILAAYDGMEVEF 277 >gi|315303944|ref|ZP_07874400.1| ribonuclease Z [Listeria ivanovii FSL F6-596] gi|313627682|gb|EFR96359.1| ribonuclease Z [Listeria ivanovii FSL F6-596] Length = 306 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 98/327 (29%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 QVLR Q+ ++ + TH H DHI G+ GL Q + +Y P +++ Sbjct: 43 QHQVLRSQIKLSKLEFIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPPGVQEYIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S R + + I+ E + + + I A +HG + S G+R Sbjct: 103 SLR--------LSGTRLTYKIIFEEIEPGVIFEDEMFAITAD--ELEHG-MQSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G + D Sbjct: 152 KDKQGALNAAKLKADGVEPGPVFQKLKNGEIVTLPDGREIDGKNYIGNPQKGKIISIFGD 211 Query: 192 ----AESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 A +N D L+ +A G H + ++ + + K ILTH+ Sbjct: 212 TRATASEFRLAENADVLVHEATFEGDKGKMAAEYMHSTTVQAAELAKRAGVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D + A+D Sbjct: 272 SRYDREASKALLIEAKSVFENTEIAYD 298 >gi|330878749|gb|EGH12898.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 140 Score = 92.9 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%) Query: 155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDA 208 A G ++ + H + + G+ F AY TD P + E LQ LD LI+D Sbjct: 8 ALGALQVTALPLTHSK-PTFGYMFEGDGQRFAYLTDTVGLPDATCEFLQRQPLDVLILDC 66 Query: 209 L---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + +H L+ +L+ I+ + P A+LTH+ LD ++ Sbjct: 67 SMPPQPQPPRNHNDLTLALQTIDQLRPGKAVLTHIGHTLDAWLM 110 >gi|316932337|ref|YP_004107319.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] gi|315600051|gb|ADU42586.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] Length = 244 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 96/272 (35%), Gaps = 44/272 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG +LG R + +S G ++D G Sbjct: 1 MQVRFVGCGDALG----------------SGGRLNTCFHVS-----GQTVNFLIDCGATS 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + R +L +D +L TH H DH G+ L FLK+KRP+ + P L Sbjct: 40 MPALKRYGILREDLDLILITHFHGDHFGGLPFLMLDAKFLKRKRPLVIAGPPGIDIRLTR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 F+ + + +E + G + P HG +R Sbjct: 100 LMEAMFEHSSATKPSFDLQVLALEPG-----VTRQFGAVTVTPFPVVHGDSGGPFFAYRV 154 Query: 179 GN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKK-IELINP 232 +AY D + + + D I +A +H SL +L+ + INP Sbjct: 155 EAEGRILAYSGDTQW-TDQLVAAAHDADLFICEAYTYDRTVKNHISLK-ALETHLPEINP 212 Query: 233 KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 K ILTHM ++ + + + P + A DG+ Sbjct: 213 KRVILTHMGDEVLHRL--DTVPH--MAASDGL 240 >gi|325120383|emb|CBZ55937.1| Metallo-beta-lactamase family protein, related [Neospora caninum Liverpool] Length = 756 Score = 92.5 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 6/109 (5%) Query: 151 CMKSAGGVIEAIPILQQHG-RISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLD---FL 204 ++ G + HG SLGF G+ + Y +DV +FP L++L++LD L Sbjct: 611 TLRIPGVPVPIQSFPVYHGGTYVSLGFLVGDKKLVYISDVTSFPTPVLDRLRHLDDLETL 670 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 ++DA+ LH++HFS+ E+L L+ P+N L M L++ + Sbjct: 671 VVDAIGEKLHNAHFSVQEALALAVLLQPRNVFLVGMSCSLEHRKTNRRL 719 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 13/102 (12%) Query: 21 ITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR----EQ 72 +C N R S + ++++D G F L Sbjct: 243 YGVACVSCFLSWKNGRDVNHRNNVSAVLRIAG-----KSLLIDCGKTFREAALAYFPLNH 297 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 + ++DAVL TH H D + GID LR + + V A Sbjct: 298 ISALDAVLLTHDHQDAVGGIDDLRDLQRFTRPTLAVPACAST 339 >gi|209521102|ref|ZP_03269831.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. H160] gi|209498448|gb|EDZ98574.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. H160] Length = 304 Score = 92.1 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 109/316 (34%), Gaps = 66/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRRGTLKATRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDLLAQIAAHPELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLYAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI------L 165 + L F A Y + + + + G I+A+P+ Sbjct: 113 DAVWQDLRSGFP---VAQILSHYCGVEHRRIALDGAPLAVDALPGIRIDALPLSSKAPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 H G G V Y + A L ++ D L++D Sbjct: 170 SPHRDAPERGDNIGLVLTNLQSGRKVFYAPGLGAIEPHVLAAMREADLLLVDGTLWTGDE 229 Query: 209 -LKNGLHSS------HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 ++ GL H + + ++ ++ + K +L H++ ++++ P Sbjct: 230 MIRLGLSKKTGADMGHLPQNGAGGMIETLDSLGAKRKVLIHINNTNP--ILIEDGPERRM 287 Query: 256 ----RVVPAFDGMQFS 267 + A+DGM F Sbjct: 288 LGEHGIEVAYDGMSFE 303 >gi|20091849|ref|NP_617924.1| ribonuclease Z [Methanosarcina acetivorans C2A] gi|41017565|sp|Q8TLK5|RNZ_METAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|19917040|gb|AAM06404.1| metallo-beta-lactamase [Methanosarcina acetivorans C2A] Length = 305 Score = 92.1 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 105/323 (32%), Gaps = 81/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G SL P R S++ I+R E ++ D G Sbjct: 2 LRITFLGTGGSL----------------PTRNRNPSAVMINREGEL-----MLFDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMK---- 116 Q++R ++S+ ++ +H HADH GI GL F+ +K P+ +Y + Sbjct: 41 QQQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFMGRKDPLMIYGPAGTREFTEL 100 Query: 117 ---------------------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + E Y +AL+ P + +IEN + Sbjct: 101 FKALGYFNLKYEIHGMELKPGDVVEGEGYVVRALETEHSTPSLGYALIENPRPGRFNREK 160 Query: 156 GGVIEAIPIL----QQHGRISSLGFRFGN-------------VAYCTDVNAFP-AESLEK 197 + P Q G G + + Y D P LE Sbjct: 161 AVALGVPPGPLFSKLQKGNPVEAGGKVVRPEEVMGTPRPGRTIVYSGDTR--PCEAVLEA 218 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDMV 249 ++ D LI D + S H + E + + +LTH+ D + + Sbjct: 219 SRDADLLIHDGSFADEMAEWAEESMHSTAGEVAALAKEAGVRKLVLTHISSRYTDDVEPI 278 Query: 250 LKSTP---SRVVPAFDGMQFSSP 269 LK + V+ A D M+ P Sbjct: 279 LKDSKKVFENVIVAEDLMELEIP 301 >gi|85059832|ref|YP_455534.1| putative phosphonate metabolism protein PhnP [Sodalis glossinidius str. 'morsitans'] gi|84780352|dbj|BAE75129.1| putative phosphonate metabolism protein PhnP [Sodalis glossinidius str. 'morsitans'] Length = 131 Score = 92.1 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 9/95 (9%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG G VP D AC ++ RRT +S I E +++D G Sbjct: 1 MQLTFLGTGDVQQVPVFCCDCAACLRARQRSVLRRTPTSALIRCEDE-----VILLDAGQ 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 Q R I ++L TH H DH+ + LR Sbjct: 56 THLEQ--RFAPGEIKSILLTHYHMDHVQELFLLRW 88 >gi|288818522|ref|YP_003432870.1| coenzyme PQQ synthesis protein B [Hydrogenobacter thermophilus TK-6] gi|288787922|dbj|BAI69669.1| coenzyme PQQ synthesis protein B [Hydrogenobacter thermophilus TK-6] gi|308752112|gb|ADO45595.1| coenzyme PQQ biosynthesis protein B [Hydrogenobacter thermophilus TK-6] Length = 297 Score = 92.1 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 102/309 (33%), Gaps = 57/309 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 LG G+P+ + C+ + +R + +S ++VD P Sbjct: 1 MEVLFLGTAGGGGLPQWNCNCPYCNKARRGSIPKREECCVALSVDGNSW----ILVDMPP 56 Query: 63 D-----FYMQVLR-EQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +VL V I ++ TH +H+ G+ RG + +Y+ Sbjct: 57 AAGSLITRYEVLAPAHVRETPIVSLFLTHTDINHMLGMFTFRGPTTHTDAYLTLYSTEAT 116 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIE----NNDVPICMKSAGGVIEAIPIL----- 165 + L + F+ V +E N+ V + K G + +PI Sbjct: 117 ERLLRDYFK--------AHSIIKVKWHTLELNTWNDIVDVRGKRLGLQVFPLPIPGKPPT 168 Query: 166 -QQH---GRISSLGFRFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDA--------LK 210 H G +L R + Y T V E + + D +I D LK Sbjct: 169 YHWHEEEGTSVALFIRSDKGKSLLYATVVRTVTEELRKLMDESDCVIFDGTFWEEEELLK 228 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTHMH-----VDLDYDMVLKSTPSRVVP 259 H ++ ESL ++ K I TH++ D + + ++ Sbjct: 229 YDPKGKRSKEIGHITVKESLDILKSCKAKYKIYTHINNTNPINDPTSQEYMSILSAGIIV 288 Query: 260 AFDGMQFSS 268 A+DGM+ S Sbjct: 289 AYDGMELSI 297 >gi|53749411|gb|AAU90269.1| hypothetical protein [Oryza sativa Japonica Group] gi|108710050|gb|ABF97845.1| phosphonate metabolism protein, putative [Oryza sativa Japonica Group] Length = 153 Score = 92.1 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 24/149 (16%) Query: 120 ESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSL 174 F Y K D+ + ++ +IE D+ S+G +E +P+ HG L Sbjct: 5 ARFPYLVKYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSG--LEFVPLPVMHGEGYVCL 61 Query: 175 GFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSESLKK 226 GF FG +AY +D+ F ++ + LD LI++A N LH E+L Sbjct: 62 GFLFGRKARIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLHG------EALDA 113 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPS 255 ++ I+PK A+LT M +++Y + Sbjct: 114 VKRISPKRALLTGMAHEIEYYKENQKLAE 142 >gi|91975269|ref|YP_567928.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] gi|91681725|gb|ABE38027.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 244 Score = 91.7 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 88/275 (32%), Gaps = 42/275 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG + G R + +S G + ++D G Sbjct: 1 MQLRFVGCGDAFG----------------SGGRLNTCFHVS-----GESANFLIDCGATT 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 + R + +D +L TH H DH G+ L F K+KRP+ + L Sbjct: 40 LPALKRYGISRDALDLILITHFHGDHFGGLPFLLLDAQFAKRKRPLVIAGPLGIDIRLTR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 F+ P + V+ + G + P HG +R Sbjct: 100 LMEALFEH--SSATKPTFDLQVVALEP---AVPQTFGAVTVTPFPVVHGDSGGPFFAYRI 154 Query: 179 G----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKKIELINPK 233 +AY D + + D I +A +H SL + INPK Sbjct: 155 EAEGRTLAYSGDTQW-TDTLVSAAHDADVFIAEAYTYERTVKNHLSLKTLETHLPEINPK 213 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 ILTHM D+ + + T + A DG+ Sbjct: 214 RLILTHMGDDVLHRL---DTVPHMG-ASDGLIVEL 244 >gi|218193393|gb|EEC75820.1| hypothetical protein OsI_12783 [Oryza sativa Indica Group] Length = 757 Score = 91.7 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 24/152 (15%) Query: 117 HLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-I 171 ++ F Y K D+ + ++ +IE D+ S+G +E +P+ HG Sbjct: 27 NVAARFPYLVKYKLEEGDEASQVAQLDWRIIEG-DIEKPFISSG--LEFVPLPVMHGEGY 83 Query: 172 SSLGFRFGN---VAYCTDVNAFPAESLEKLQ-----NLDFLIIDALKNGLHSSHFSLSES 223 LGF FG +AY +D+ F ++ + LD LI++A N LH E+ Sbjct: 84 VCLGFLFGRKARIAYLSDILRFLPKTEHAISKSGAGQLDLLILEA--NSLHG------EA 135 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L ++ I+PK A+LT M +++Y + Sbjct: 136 LDAVKRISPKRALLTGMAHEIEYYKENQKLAE 167 >gi|253582788|ref|ZP_04860008.1| coenzyme PQQ synthesis protein B [Fusobacterium varium ATCC 27725] gi|251835364|gb|EES63905.1| coenzyme PQQ synthesis protein B [Fusobacterium varium ATCC 27725] Length = 287 Score = 91.3 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 99/298 (33%), Gaps = 56/298 (18%) Query: 9 ILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G+P++ + C + ++++ I + +++ P F Sbjct: 8 FLGTAQDGGIPQMECNCEICTDIRAGKRKEILQAAIGIENAK---TGNRYMIEATPAFSK 64 Query: 67 Q---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q + ++ +D + TH H H G+ L L K I VY + + L Sbjct: 65 QYQSFIADKNGKLDGIFLTHAHMGHYTGLMYLGREALNSKG-IKVYVSSKMAEFLRT--- 120 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRI--SSLGFRF-- 178 + + +V I+ + + I IP+ H + GF Sbjct: 121 -------NAPWSQLVKLKNIDLIEFESGKELVLDNDIRIIPVEVPHRNEFADTHGFIVKG 173 Query: 179 -GNVAYCTDVN---AFPAESLEKLQNLDFLIIDALKNG---------------LHSSHFS 219 + + D++ F + + + D+L +DA H + Sbjct: 174 KKSFFFVPDIDSWEGFENQLNDIFKQCDYLAVDATFYTKEEIGSIRGRNFKEIPHPT--- 230 Query: 220 LSESLKKIEL----INPKNAILTHMHVDLDYDMVLKSTPSRVVPA-----FDGMQFSS 268 + E++ I+ + K ILTH + + K +V A DGM+ + Sbjct: 231 VEETIDFIKSNNWNLKDKKVILTHFNHT-NLLFTNKKLKEKVEKAGIIISEDGMEITL 287 >gi|239820891|ref|YP_002948076.1| coenzyme PQQ biosynthesis protein B [Variovorax paradoxus S110] gi|239805744|gb|ACS22810.1| coenzyme PQQ biosynthesis protein B [Variovorax paradoxus S110] Length = 310 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 101/321 (31%), Gaps = 68/321 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG GA G P+ + C + RT+SS+ +S E V++ Sbjct: 1 MKVLVLGSGAGGGFPQWNCNCRLC--AGQRQGVLDACARTQSSVAVSADGESW----VLL 54 Query: 59 DTGPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ R + I AV+ DH+ G+ L++ ID+Y Sbjct: 55 NASPDIGQQIRSHPQLHPRHGLRDTPIKAVVLMDAQIDHVAGL-----LGLREGPRIDLY 109 Query: 110 AAPDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 A P + L SF YC I P +A + Sbjct: 110 ATPCVFEDLTTSFPVLGVLEHYCGTRWHMLAVAGTQTRIDFGVAGFPSLRFTAVAIPGKA 169 Query: 163 PILQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 P H R ++G + Y + E L + + D L++D Sbjct: 170 PPYSPHRREQTVGDNIALLIEDLQGGQRLFYAPGLAEVGPEELRWMHDADCLLLDGTFWT 229 Query: 213 LHSS-HF-----------SLSES--------LKKIELINPKNAILTHMHVD---LDYDMV 249 H L ++ + + + +LTH++ LD Sbjct: 230 EDEMRHAGLGTRSASDMGHLPQTGSGPRAGMVDALLATPARRKVLTHINNSNPILDAASA 289 Query: 250 LKST--PSRVVPAFDGMQFSS 268 + + A+DGM+ + Sbjct: 290 QRQLLEGHGIEVAYDGMEITL 310 >gi|226951884|ref|ZP_03822348.1| coenzyme PQQ synthesis protein B (coenzyme PQQ synthesis protein V) [Acinetobacter sp. ATCC 27244] gi|294649141|ref|ZP_06726582.1| coenzyme PQQ synthesis protein B (pyrroloquinoline quinone biosynthesis protein B) [Acinetobacter haemolyticus ATCC 19194] gi|226837424|gb|EEH69807.1| coenzyme PQQ synthesis protein B (coenzyme PQQ synthesis protein V) [Acinetobacter sp. ATCC 27244] gi|292824939|gb|EFF83701.1| coenzyme PQQ synthesis protein B (pyrroloquinoline quinone biosynthesis protein B) [Acinetobacter haemolyticus ATCC 19194] Length = 303 Score = 91.0 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 97/312 (31%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKN--RRTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS V+++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTMNAKARTQSSIAISENGMDW----VLLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I +V+ DH G+ L++ P+DV+ Sbjct: 57 SPDIRQQLFDFKAAQPARQLRDTGIRSVILMDSQLDHTTGL-----LTLREGCPMDVWCT 111 Query: 112 PDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L F Y PI + + + A P H Sbjct: 112 DMVYQDLTTGFPVFNMLKHWNGGLQYHPIDPKKAFKIDGFGCLEFIPFIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +QN D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQVMQIMQNSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSR 256 K G H +S SL + ++ +L H++ D + + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKANG 291 Query: 257 VVPAFDGMQFSS 268 V A+DGMQ Sbjct: 292 VEVAYDGMQIEL 303 >gi|328951663|ref|YP_004368998.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451987|gb|AEB12888.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] Length = 321 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 91/285 (31%), Gaps = 40/285 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN---PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++G G S P+ C +++R SL + V++DT Sbjct: 1 MRLIVVGSGGSQPTPKAGCACRVCTAARRFGGRHQRAGPSLYV-------HEGAVLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + +++ + + AV +TH H DH G+ + + RP+ Y + L Sbjct: 54 EEINARLVALDL-APQAVFWTHAHPDHAAGMRVIEFLAQARGRPVRGYVPHELYPELMRR 112 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 Y + + R + + V A E PI G G V Sbjct: 113 --YPLEHMARRGWLEVTRFAPERPLQVAGLRWMALRHAEEEPIY----SYVIEGA-AGRV 165 Query: 182 AYCTD---VNAFPAESLEKLQNLDFLIID-----ALKNGLHSSH-----FSLSESLKKIE 228 Y D P L L + AL L +H F E++ + Sbjct: 166 LYAPDHYQTLPVPEGRFA----LAVLQVPRLPQAALPAPLPPTHPAFRRFKAWEAVLEEW 221 Query: 229 LINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 + TH++ + +YD + ++ V A DGM Sbjct: 222 RGKTDRLVFTHLYEAIGLLPEEYDRLARTAGDWVGFAHDGMALEL 266 >gi|289640845|ref|ZP_06473016.1| Adenosylcobinamide-phosphate guanylyltransferase [Frankia symbiont of Datisca glomerata] gi|289509421|gb|EFD30349.1| Adenosylcobinamide-phosphate guanylyltransferase [Frankia symbiont of Datisca glomerata] Length = 544 Score = 90.2 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 44/262 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G++ G P +C+ RT++++ + + +++D GPD Sbjct: 1 MRLRLLGTGSADGWPNPWCGCASCEWAREHQVRTQTAVLV--------DDRLLIDCGPDV 52 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIH-GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R V D +L++H H DH R + RP+DV P + Sbjct: 53 PRAATRFGVRLADVRHLLFSHAHGDHTGPAALLWRTWSTVATRPLDVVGPPASLDACR-- 110 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---RISSLGFRF 178 F A D + + DV + E + HG +L + Sbjct: 111 ---PFVAPPDGD-TGALRFRLAHAGDV-----LSLDGFEIRALAANHGAAFVGPALLYDI 161 Query: 179 -----GNVAYCTDVNA-FPAESLEKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 G + Y D A P +L+ L F ++ + + G H L+ + Sbjct: 162 TAPDGGRLLYACDTAAPLPPATLDALTGRAFDVVLMEENNGDRPGFGD-HLDLATFADVL 220 Query: 228 ELINPKNAIL-------THMHV 242 + + A++ H+ Sbjct: 221 ARLRRREAVVETTRVVAVHLSH 242 >gi|302340107|ref|YP_003805313.1| hypothetical protein Spirs_3633 [Spirochaeta smaragdinae DSM 11293] gi|301637292|gb|ADK82719.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293] Length = 290 Score = 89.8 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 95/302 (31%), Gaps = 60/302 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG GA+ G P + + AC KN + RS + N +V++D Sbjct: 1 MRIKYLGTGAAEGFPGLFCECAACRKARDRRGKNLKMRSCTLL--------NDSVLIDIS 52 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK-------------QKRPI 106 PD + Q L + I A++ TH H DH+ L L+ + I Sbjct: 53 PDIFAQSLSFGIRMSKIKAIVCTHSHEDHL----DLFSLMLRCRTGSSHLPDIPPSQNHI 108 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + +F + P + ++ +++ +E P+ Sbjct: 109 HVYGSSAIIGKIEHAF----------SSQPHADRNILIFHELKAYRPYLIEGLEFTPLPA 158 Query: 167 QH-GRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNL----DFLIIDALKNGL-HSS 216 QH + R G + Y D A + ++ L + +D + L Sbjct: 159 QHIPDEECFLYCVREGKHSLLYANDTGAPTEDFFSGVERLPHPFSVVSLDCARGTLDGDG 218 Query: 217 HFSLSESLKKIELIN-------PKNAILTHMHV--DLDYDMVLKSTP-SRVVPAFDGMQF 266 H + E + L H + +D + +DG+ Sbjct: 219 HMGIKEVRSLCGRLKKMGKIVPASRIYLNHFSHMCGMIHDEFQDLIAEEGLRLTYDGLTL 278 Query: 267 SS 268 Sbjct: 279 EV 280 >gi|21226408|ref|NP_632330.1| ribonuclease Z [Methanosarcina mazei Go1] gi|41017564|sp|Q8Q032|RNZ_METMA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|20904666|gb|AAM30002.1| metal dependent hydrolases [Methanosarcina mazei Go1] Length = 305 Score = 89.4 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 101/323 (31%), Gaps = 81/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G SL PT +N S++ ++ E ++ D G Sbjct: 2 LRIIFLGTGGSL-------------PTRNRN---PSAVIVNLKGEL-----LLFDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMK---- 116 Q++R ++S+ ++ +H HADH GI GL FL +K P+ +Y + Sbjct: 41 QQQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFLGRKEPLTIYGPEGTKEFTEV 100 Query: 117 ---------------------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + E Y +AL P + +IEN + Sbjct: 101 FKVLGYCNLKYEVRGVELSPGDIVEGKNYVVRALKTEHSTPSLGYSLIENPRPGRFNREK 160 Query: 156 GGVIEAIPIL-----QQHGRISSLGFRFG------------NVAYCTDVNAFP-AESLEK 197 + +P Q+ + G V Y D P LE Sbjct: 161 AVELGVLPGPLFAKLQKGNPVEVNGKLVKPEEVVGAPRPGRTVVYSGDTR--PCEAVLEA 218 Query: 198 LQNLDFLIIDALK------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV-- 249 ++ D LI D S H + E + + +LTH+ D+ Sbjct: 219 SRDADVLIHDGSFADEMAGWAEESMHSTAGEVASLAKEAGVRQLVLTHISSRYTDDVGPI 278 Query: 250 ---LKSTPSRVVPAFDGMQFSSP 269 + V+ A D M+ P Sbjct: 279 LNDSRKVFENVIVAEDLMELEVP 301 >gi|115522748|ref|YP_779659.1| beta-lactamase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516695|gb|ABJ04679.1| beta-lactamase domain protein [Rhodopseudomonas palustris BisA53] Length = 244 Score = 89.4 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 84/274 (30%), Gaps = 40/274 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +G G + G R + +S G ++D G Sbjct: 1 MQLRFVGSGDAFG----------------SGGRLNTCFHVS-----GQQVNFLIDCGASS 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + R + ID VL TH H DH G+ L F K+KRP+ + L Sbjct: 40 LPALKRYGISRDDIDLVLITHFHGDHFGGVPFLLLEAQFAKRKRPLVIAGPHGIDLRLTR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 F+ + VI D + + P+L +R Sbjct: 100 LMEALFE--NSSLTKQHFELSVI-GLDPGVPQNFGAATVTPYPVLHGDSGGPFFAYRIEA 156 Query: 180 ---NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKKIELINPKNA 235 +AY D ++ + D I + +H SL + INPK Sbjct: 157 EGRTLAYSGDTQW-TDTLVDAGHDADLFISECYTYDRPVKNHLSLKTLETHLPEINPKRV 215 Query: 236 ILTHMHVDLDYDMVLKSTPS-RVVPAFDGMQFSS 268 +LTHM D +L+ S A DG+ Sbjct: 216 VLTHMS-----DEMLRKLDSVNHTVAQDGLIIEL 244 >gi|300710007|ref|YP_003735821.1| hypothetical protein HacjB3_03180 [Halalkalicoccus jeotgali B3] gi|299123690|gb|ADJ14029.1| hypothetical protein HacjB3_03180 [Halalkalicoccus jeotgali B3] Length = 247 Score = 89.0 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 94/284 (33%), Gaps = 56/284 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 FT LG G LG R ++ ++ S R ++D G Sbjct: 2 SEISFTFLGSGDPLG----------------SGGRLQTCFHVAAPSGR-----FLIDCGA 40 Query: 63 DFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQK------RPIDVYAAPDC 114 + RE V I+A+ TH H DHI G+ + L + P+ + P Sbjct: 41 TSMAAMKREGVDRNAIEAIFITHLHGDHIGGLP---YFVLDAQLIAERTEPLVIAGPPGL 97 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----- 169 + L + F L + + +E + K+A G ++ P H Sbjct: 98 EERLRAAMDVSFPGLSGVKQRFELQIVELEADR-----KTAIGPVDVTPTEVVHACGAPP 152 Query: 170 ---RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLK 225 R+ G +AY D E + D + ++ +H + Sbjct: 153 YALRLDIDG---KTLAYSGDTEW-TDALFEVARGADLFVCESYFYEKAVPNHLNYRTLSS 208 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPS-RVVPAFDGMQFSS 268 + ++ + ++THM D+ L P V A DG + S Sbjct: 209 HRDELDCERLVITHMGEDM-----LSRLPDLDVEYARDGKRISI 247 >gi|160941220|ref|ZP_02088557.1| hypothetical protein CLOBOL_06113 [Clostridium bolteae ATCC BAA-613] gi|158435781|gb|EDP13548.1| hypothetical protein CLOBOL_06113 [Clostridium bolteae ATCC BAA-613] Length = 274 Score = 89.0 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 94/292 (32%), Gaps = 50/292 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I G G +P C K R R SL I + +++DT Sbjct: 1 MKLKIAGSGGMFLIPNPFCKCPVCQEARTKRGRYERLGPSLYIEDIG-------MLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRPIDVYAAPDCMKH 117 D + R+ + ID + +H DH G+ + + PI A P+ + Sbjct: 54 EDIAVACERQGISRIDYLSISHKDPDHTRGMRIVEPLGYDCITGKGTPIQFIALPEVIDD 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + Y I+N I I + + G IE + + R + + Sbjct: 114 IN-----AWNGDGLYYYQNILNCISINRTNY-----AKIGSIELHLVNNKTHRGNMTFYV 163 Query: 178 FGN----VAY-CTDVNAFPAESLEKLQNLDFLIID------------ALKNGLHSSH-FS 219 + Y C DV F E + D LII +L + F+ Sbjct: 164 ISDGSKKAVYACCDVKPFVPN--ELYYDTDVLIIGLVSDDGILKDGSSLDSAPFRDDMFT 221 Query: 220 LSESLKKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 L E L+ K ++TH+ Y K V A+DGM+ Sbjct: 222 LDEMLELKRTYRIKRIVITHIDEYWGKSYAYYREFEKKL-DNVSFAYDGMEI 272 >gi|118594754|ref|ZP_01552101.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylophilales bacterium HTCC2181] gi|118440532|gb|EAV47159.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylophilales bacterium HTCC2181] Length = 304 Score = 89.0 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 107/314 (34%), Gaps = 64/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 +LG GA G P+ + C N RT+SS+ +S E V+ + Sbjct: 1 MQIRVLGSGAGGGFPQWNCNCENCAGLRANNPNLKARTQSSITVSGNGEDW----VLFNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I +++ T DH G+ LR + +P D+Y Sbjct: 57 SPDIRAQIESFPPLQPARKIRDTGITSIVITDGQIDHATGLLILR----EHDKPWDIYCT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPI------ 164 + + + F L+ V+ + VP + A + A+P+ Sbjct: 113 KAVYEDMTTGYP-IFNILEHFRG---VHWHEVSTEQVPYSIPKADNLIFTAVPLKSEAPP 168 Query: 165 --LQQHGRIS--SLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-- 212 +H + ++G++ N+ Y + LE + N D ++ID Sbjct: 169 YSPHRHNTVPGDNVGYKIEDTKTGKNLFYAPGLGVIEDHVLEYMANADAVLIDGTVWTND 228 Query: 213 ---LH------SSHF-SLSES-----LKKIELINPKNAILTHMHVDL-----DYDMVLKS 252 H +S L +S ++ + + IL H++ D + Sbjct: 229 EMSRHGINDKLASEMGHLDQSSKGGIMETLSALKKPRKILIHINNTNPILREDSEERKIL 288 Query: 253 TPSRVVPAFDGMQF 266 + ++DGM Sbjct: 289 NSHNIEVSYDGMDI 302 >gi|218512415|ref|ZP_03509255.1| hypothetical protein Retl8_01344 [Rhizobium etli 8C-3] Length = 64 Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M FTILGC +S GVPRITGDWGAC+P NPKNRRTR+S + + G TTV+VDT Sbjct: 1 MLYRRRFTILGCSSSPGVPRITGDWGACNPDNPKNRRTRASFMVQQFGPDGV-TTVVVDT 59 Query: 61 GPDF 64 F Sbjct: 60 RAGF 63 >gi|227328276|ref|ZP_03832300.1| carbon-phosphorus lyase complex accessory protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 149 Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 14/114 (12%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVD 59 D F LG G + VP + C + K RR I+ N +++D Sbjct: 9 SDGIVFHFLGTGGAQQVPAFGCECEVCQQAQRDEKKRRRACCAAITT-----KNRIILID 63 Query: 60 TG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 G + +L +L TH H DH+ G+ LR + PI V+ Sbjct: 64 AGLSELAPYLLPYPTRH---ILLTHYHMDHVQGLFPLRWGY---GEPIPVFGPQ 111 >gi|91777666|ref|YP_552874.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia xenovorans LB400] gi|91690326|gb|ABE33524.1| Pyrroloquinoline quinone biosynthesis protein B [Burkholderia xenovorans LB400] Length = 306 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 115/320 (35%), Gaps = 70/320 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRRGTIKATRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDLLAQIAANPELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLYAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPI------ 164 + L F A Y V I + P+ + + GGV I+A+P+ Sbjct: 113 NAVWQDLCSGFP---VAPILSHYCG-VEHRRIALDGAPLAIDALGGVQIDALPLSSKAPP 168 Query: 165 LQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H G G V Y + A A L ++ D L++D Sbjct: 169 YSPHRNAPERGDNIGLVITNRQTGKRVFYAPGLGAIEAHVLAAMREADLLLVDGTLWTAD 228 Query: 209 --LKNGLHSSHF----SLSES-----LKKIELINPKNA--ILTHMHVDLDYDMVLKSTPS 255 ++ L L +S ++ ++ + NA +L H++ ++++ P Sbjct: 229 EMIRLELSKKTAADMGHLQQSGPGGMIEVLDSLGAHNARKVLIHINNTNP--ILVEDGPE 286 Query: 256 -------RVVPAFDGMQFSS 268 + A+DGM F Sbjct: 287 RRILTEHGIEVAYDGMTFEI 306 >gi|304316025|ref|YP_003851170.1| hypothetical protein Tthe_0523 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777527|gb|ADL68086.1| conserved hypothetical protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 280 Score = 88.3 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 105/304 (34%), Gaps = 64/304 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 F ILG G +PR C K + R SL + + ++VDT Sbjct: 1 MKFIILGSGGCTAIPRPLCKCKICKEAREKGKPYSRFGCSLFL-------DDLKLLVDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGID-----GLRGYFLKQKR----PIDVYAAP 112 D + + +++VL++H DH G+ L + + + PIDV+A Sbjct: 54 EDIVHALNYANIQQVNSVLFSHIDPDHTLGMRVFEHMRLDWLQISEGKECSNPIDVFAMD 113 Query: 113 DCM---KHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 M + F Y + R +I+ V + I I Sbjct: 114 HVMSDVNSIGSKFGSYLDYYENIR--------NIIKRKVVSDFVYLDDIKITFIKANSAT 165 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII------------------DALK 210 + G R A C DV FP + + D +II ++L+ Sbjct: 166 VFVFEQGKRKAIYAPC-DVKPFPNN--DIFTDTDIMIIGNTVIGEILKDGFILEENNSLR 222 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGM 264 N L FS++E + K I+TH+ D DY + K +V A+DGM Sbjct: 223 NEL----FSMNEIEQLKNDYGIKKVIITHIEEDWGKSYD-DYLELQKQYKD-IVFAYDGM 276 Query: 265 QFSS 268 F Sbjct: 277 TFEV 280 >gi|260550422|ref|ZP_05824633.1| coenzyme PQQ synthesis protein B [Acinetobacter sp. RUH2624] gi|260406528|gb|EEX00010.1| coenzyme PQQ synthesis protein B [Acinetobacter sp. RUH2624] Length = 303 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 93/308 (30%), Gaps = 57/308 (18%) Query: 9 ILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C T N RT+SS+ +S ++++ PD Sbjct: 5 ILGSAAGGGFPQWNCNCPNCHGVRTGKINAKVRTQSSIAVSENGVDW----ILLNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I V+ DH G+ L++ P++V+ Sbjct: 61 RQQLFDFKTAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPMNVWCTEMVY 115 Query: 116 KHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + L F Y I + + + A P H Sbjct: 116 QDLTTGFPVFNMLKHWNGGLQYNEINPKQAFKIDGFENLEFLPLIIQSAAPPYSPHRHDP 175 Query: 173 SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------------- 209 G + Y + + ++ +QN D ++ID Sbjct: 176 HEGDNIALIIKDRKTQKQLFYAPGLGKIDDQIMQIMQNSDCVMIDGTLWTDDEMQQTGVG 235 Query: 210 -KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPA 260 K G H +S SL + +N +L H++ D + V A Sbjct: 236 KKTGREMGHLYISGEGGSLSYLNQLNTPKKVLIHINNTNPILNEDSAQFAELKAHGVEVA 295 Query: 261 FDGMQFSS 268 +DGMQ Sbjct: 296 YDGMQIEL 303 >gi|189219245|ref|YP_001939886.1| Coenzyme PQQ synthesis protein B, beta-lactamase superfamily [Methylacidiphilum infernorum V4] gi|161075747|gb|ABX56621.1| coenzyme PQQ synthesis protein B [Methylacidiphilum infernorum V4] gi|189186103|gb|ACD83288.1| Coenzyme PQQ synthesis protein B, beta-lactamase superfamily [Methylacidiphilum infernorum V4] Length = 298 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 103/314 (32%), Gaps = 70/314 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---------RRTRSSLKISRVSERGSNTT 55 +LG GA G+P+ C + RRT+SS+ + E+ Sbjct: 1 MEVLVLGSGAGGGIPQWNCLCPNCVRARLEIKERKESFIFRRTQSSIAVRETGEKW---- 56 Query: 56 VIVDTGPDFYMQVLRE----------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V+++ D Q+ RE + AV+ T DH G+ L++ + Sbjct: 57 VLLNASIDLPAQISRESELSPPGVEIRSSPFSAVILTDAQIDHASGL-----LSLREGKE 111 Query: 106 IDVYAAPDCMKHLFESFRYC-----FKALDDRTYPP-----IVNPIVIENNDVPICMKSA 155 I++ L +S+ F + +P N I + ++ P + Sbjct: 112 IELVCTQQTWDVLSDSYPLIRVLSSFLKIKKNLFPIKIGSLFFNAINLRSSAPPYVQREP 171 Query: 156 -GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL- 213 G + A+ I + G+ + YC + + + +Q+ +D Sbjct: 172 RPGDVIALSIEDESGK---------KIVYCPALPEINPDLEDFVQDSLCFFVDGTFWSEN 222 Query: 214 ----------------HSSHFSLSESLKKIELINPKNAILTHMH-----VDLDYDMVLKS 252 H + + SL+ + + I H++ +D D Sbjct: 223 ELSLWNIKDKKASQMGHVAVGGENGSLRWLSTLKIPRKIYIHINNTNPMIDPDSAQAKAV 282 Query: 253 TPSRVVPAFDGMQF 266 S V A+DGM+ Sbjct: 283 LSSGVEIAYDGMKL 296 >gi|53804509|ref|YP_113904.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylococcus capsulatus str. Bath] gi|61214818|sp|Q608P3|PQQB_METCA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|53758270|gb|AAU92561.1| coenzyme PQQ synthesis protein B [Methylococcus capsulatus str. Bath] Length = 304 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 99/312 (31%), Gaps = 68/312 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G P+ C KN RT+SS+ +S +R V+ + PD Sbjct: 5 VLGAGAGGGFPQWNCRCDNCRRFREKNINARGRTQSSIAVSADGQRW----VLFNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ I A++ DH G+ LR + RP+ VY + Sbjct: 61 RSQLEAFPASHPSKGVRDTGIHAIVLIDSQIDHTTGLLMLR----ESTRPLQVYCSEMVK 116 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI-------PILQQH 168 + L F F+ L+ V + + + G+ + P H Sbjct: 117 QDLSTGFP-LFRMLEHYCG---VEQHTVPLDGSGFTIPGIEGLKFSTHSLKSKAPPYSPH 172 Query: 169 GRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-H 217 G G + Y + ++ D L++D H Sbjct: 173 RHDPHEGDNIGVIVENLENGRKLYYAPGLGEIEPHVRAAMEAADCLLVDGTFWREDEMRH 232 Query: 218 F-----------SLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTP------- 254 L +S L+ + + +L H++ ++ + +P Sbjct: 233 AGICDKLAREMGHLPQSGPGGMLEILNTLPNARKVLIHINNTNP--ILDEDSPQYRTLSE 290 Query: 255 SRVVPAFDGMQF 266 + V A+DG++ Sbjct: 291 AGVEVAYDGLEI 302 >gi|307824589|ref|ZP_07654813.1| coenzyme PQQ biosynthesis protein B [Methylobacter tundripaludum SV96] gi|307734243|gb|EFO05096.1| coenzyme PQQ biosynthesis protein B [Methylobacter tundripaludum SV96] Length = 303 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 102/318 (32%), Gaps = 73/318 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 +LG GA G P+ + C K RT+SS+ +S ++ ++ +T Sbjct: 1 MKIRVLGSGAGGGFPQWNCNCHNCHRLRHKEMNGKARTQSSIAVSTDNKNW----LLFNT 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ +E V I A++ DH G+ L++ +P+DVY Sbjct: 57 SPDIRAQLEAFPAIQPKEGVRDTGIKAIMLIDSQIDHTTGL-----LMLREGKPLDVYCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA--------IP 163 + L F F L D VN I + + + P Sbjct: 112 EMVKQDLTTGFP-LFNMLADYC---TVNHHPIPFDGSSFTIPG-IDDLRFYTQALKSKAP 166 Query: 164 ILQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIID------ 207 H G G V Y + + +Q +D L++D Sbjct: 167 PYSPHRHDPHDGDNIGVIIEQISTGKKVFYSPGLGEIEPHVMAAMQTVDCLLVDGTFWTN 226 Query: 208 ---ALKNGLHSS-----HF------SLSESLKKIELINPKNAILTHMHVD---LDYDMVL 250 +N H H + E L + IL H++ LD D Sbjct: 227 DEMCTQNISHKKAREIGHLPQSGEGGMIEVLSGVAKA---RKILIHINNTNPILDDDSEQ 283 Query: 251 KST--PSRVVPAFDGMQF 266 + + + ++DG++ Sbjct: 284 RKILDAAGIEVSYDGLEI 301 >gi|325523139|gb|EGD01537.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia sp. TJI49] Length = 307 Score = 87.9 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 108/323 (33%), Gaps = 75/323 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S ++V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCANCRRARSGSGHVLPRTQSSIAVSDDGVDW----ILVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILSQ-LRADPDLQPARAIRDSGIAAVVLCDAQIDHVTGLLMLR----ERSTPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L L V+ I + + G AIP+ + Sbjct: 112 SAPVLDDLSTGLP-LVPLLGHYCG---VDAHPIALGEPFAVPATPGIRFTAIPVDSKAPP 167 Query: 171 I----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++ ++A Y + A + ++ D +++D Sbjct: 168 YSPRRASAAPGDNVALSIEDLASGRRAFYAPGLAAITDDVRAAMERADLVLVDGTFWTGT 227 Query: 209 --LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDLD 245 + GL + H L++ + ++ + + +LTH++ ++ Sbjct: 228 EMIDLGLSAKHAADMGHLAQCAEAGRPGMIDWLDTLPAQTRKVLTHINNTNPILDPHSVE 287 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + + + A DGMQF Sbjct: 288 HAQLRA---HGIDVAHDGMQFQV 307 >gi|261410062|ref|YP_003246303.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|329925066|ref|ZP_08280010.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|261286525|gb|ACX68496.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] gi|328940185|gb|EGG36517.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 267 Score = 87.9 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 51/230 (22%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ ID +L TH H+DHI G+ + +K Sbjct: 20 RNEDTTLLIDAGLSARRIDELLKEREMMGEEIDGILVTHEHSDHIRGLGAVA-----RKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + +S + N IV+E+++V G + P Sbjct: 75 NLPIYANEKTWEAMSKSLGKIAEE----------NRIVLESHEVK-----DFGTLRVEPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +G+ F + TD+ + + L D L+++A L+ G + Sbjct: 120 EISHDAAAPVGYCFYDGDEKLGVATDLGYVSDKVKKALDGSDVLVLEANHDIEMLRMGRY 179 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 H S + + + + + K L H+ LD++M+ Sbjct: 180 PWNTKRRILGDMGHLSNNSAGDALSELLTGDTKRTYLAHLS--LDHNMMD 227 >gi|21232368|ref|NP_638285.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767500|ref|YP_242262.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. campestris str. 8004] gi|188990611|ref|YP_001902621.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. campestris str. B100] gi|32129900|sp|Q8P6N0|PQQB_XANCP RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|81306520|sp|Q4UXI1|PQQB_XANC8 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|226704961|sp|B0RQ28|PQQB_XANCB RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|21114143|gb|AAM42209.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572832|gb|AAY48242.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas campestris pv. campestris str. 8004] gi|167732371|emb|CAP50563.1| Coenzyme PQQ synthesis protein B [Xanthomonas campestris pv. campestris] Length = 299 Score = 87.5 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 106/323 (32%), Gaps = 83/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S +R V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASQRAWQQADGAQRRTQASIAVSADGQRW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I++VL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIESVLLTSGEIDHIAGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ F A +NP ++ + + ++ P G++ Sbjct: 112 SRVLDLLAQNP--IFDA---------LNPQYVDRHPFALNTPLTLCDLQLTPFSVP-GKV 159 Query: 172 S-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 +LG + V Y A + +L + + D Sbjct: 160 PLFMESRSGGDLAGSNEETLGLTIDDGRHRVHYIPGCAAMTDDLRARLHGAELVFFDGTL 219 Query: 210 -------------KNGLHSSHFSL---SESLKKIELINPKNAILTHMH--------VDLD 245 K G H S+ +L + +L H++ + Sbjct: 220 WRDDEMVQLGVSQKTGQRMGHMSIDGTDGTLAAFAQLQVARKVLIHINTTNPVLDAHSPE 279 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + V + A DG++ S Sbjct: 280 HAAVRA---AGWDVAHDGLEISL 299 >gi|315644221|ref|ZP_07897391.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315280596|gb|EFU43885.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 267 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 51/230 (22%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ ID +L TH H+DHI G+ + +K Sbjct: 20 RNEDTTLLIDAGLSARRIDELLKEREMMGEEIDGILVTHEHSDHIRGLGAVA-----RKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + +S + N IV+E+++V G + P Sbjct: 75 NLPIYANEKTWEAMTKSLGKIAEE----------NRIVLESHEVK-----DFGTLRVEPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +G+ F + TD+ + + L D L+++A L+ G + Sbjct: 120 EISHDAAAPVGYCFYDGDEKLGVATDLGYVSDKVKKALDGSDVLVLEANHDIEMLRMGRY 179 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 H S + + + + K L H+ LD++M+ Sbjct: 180 PWNTKRRILGDMGHLSNISAGDALSELLTGDTKRTYLAHLS--LDHNMME 227 >gi|313125758|ref|YP_004036028.1| metal-dependent hydrolase, beta-lactamase superfamily i [Halogeometricum borinquense DSM 11551] gi|312292123|gb|ADQ66583.1| metal-dependent hydrolase, beta-lactamase superfamily I [Halogeometricum borinquense DSM 11551] Length = 252 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 82/258 (31%), Gaps = 58/258 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT+LG G LGVP + + R I TT+++D P+F Sbjct: 1 MRFTLLGTGDVLGVPPPFQTLADANAAARRRR---CGALIET-----ETTTLLLDVPPEF 52 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + V S+DA TH H DH+ GID L + I +Y + Y Sbjct: 53 RDGIRQADVGSVDAAFVTHWHHDHVGGIDDLA--LTARFLDIPLYLTATAQDRFAQEKPY 110 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR--ISSLGFRF---- 178 ++ R + P+ + G IE PI H R +L FR Sbjct: 111 LTDSVAIRNL----------MHGEPVTV----GDIEITPIPVAHDRPECDTLAFRLETGT 156 Query: 179 GNVAYCTD----VNAFPAESLEKLQNLDFLIIDALK-----------NGLHSSHFSLSES 223 + Y D P + N D +++A Sbjct: 157 ETMVYAPDFENWCPDMPG--GKMYTNADLAVLEATPAIAPELLSSDVPTPDP-------- 206 Query: 224 LKKIELINPKNAILTHMH 241 + +LTH++ Sbjct: 207 ---VTKAAASRTVLTHLN 221 >gi|296161450|ref|ZP_06844256.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. Ch1-1] gi|295888265|gb|EFG68077.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. Ch1-1] Length = 306 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 116/320 (36%), Gaps = 70/320 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRHGTIKATRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDLLAQIAANPELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLYAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPI------ 164 + L F A Y V I + VP+ + + GV I+A+P+ Sbjct: 113 DAVWQDLCSGFP---VAPILSHYCG-VEHRRIALDGVPLTVDALNGVQIDALPLSSKAPP 168 Query: 165 LQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H G G V Y + A A L ++ D L++D Sbjct: 169 YSPHRNAPQRGDNIGLVITNRQTGKRVFYAPGLGAIEAHVLAAMREADLLLVDGTLWTAD 228 Query: 209 --LKNGLHSSHF----SLSES-----LKKIELINPKNA--ILTHMHVDLDYDMVLKSTPS 255 ++ GL L +S ++ ++ + NA +L H++ ++++ P Sbjct: 229 EMIRLGLSKKTAADMGHLQQSGPGGMIEVLDSLGAHNARKVLIHINNTNP--VLVEDGPE 286 Query: 256 -------RVVPAFDGMQFSS 268 + A+DGM F Sbjct: 287 RRILTEHGIEVAYDGMTFEI 306 >gi|239996867|ref|ZP_04717391.1| pyrroloquinoline quinone biosynthesis protein PqqB [Alteromonas macleodii ATCC 27126] Length = 306 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 99/319 (31%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ C RT+SS+ +S + V+++ Sbjct: 1 MHVLILGAAAGGGFPQWNCHCPNCKGLREGKIKAKGRTQSSIAVSSDGKNW----VLINA 56 Query: 61 GPDFYMQVLRE----------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q+ + I A++ T DH G+ L++ P+ VY Sbjct: 57 SPDLREQINSHPQLWPDAHVSRGTRISAIVLTDSQIDHTTGL-----LTLREGLPLPVYC 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L SF F L + I + + + + G + + + Sbjct: 112 TDVVAEDLTTSFP-LFTVLKHWHGGLQQHSINTDYHQRFVPKGAEGLTFQPVVLESNAPP 170 Query: 171 ISSL----------GFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDAL----- 209 S+ G + + + Y + ++ ++ D Sbjct: 171 YSTYRDNIVPGNNIGLKITDDTTGNVLFYAPGCMQANDTVKQVMRESHCVLFDGTLWANE 230 Query: 210 ---------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD---LD-----YDMV 249 K G H ++ ++ + N + +L H++ LD Y + Sbjct: 231 EMIDHGFSNKLGTDMGHMPVNGKGGAIALLNEFNVERKVLIHINNTNRVLDEDSSAYHSL 290 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + + A+DGM+ Sbjct: 291 CEQ---GIELAYDGMEIEV 306 >gi|91774034|ref|YP_566726.1| ribonuclease Z [Methanococcoides burtonii DSM 6242] gi|91713049|gb|ABE52976.1| Ribonuclease Z [Methanococcoides burtonii DSM 6242] Length = 305 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 99/325 (30%), Gaps = 85/325 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G SL P R S++ ++R E ++ D G Sbjct: 2 LKVTFLGTGGSL----------------PTTNRNPSAIMLNREGEL-----IMFDCGEGA 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q++R ++++ ++ TH HADHI GI GL Q R P+ +Y + + Sbjct: 41 QQQMMRAKTGMMNLSSIFITHFHADHILGIPGLVQTMSFQGRTEPLTIYGPEWVEEFVKI 100 Query: 120 ------------------------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + Y AL P + ++E+ + Sbjct: 101 LSAIGYYKLKFEIKAVKLKSGTSVKRDGYSVIALKTDHNIPSIGFALVEDERPGRFDRDK 160 Query: 156 ----GGVIEAIPILQQH-GRISSLGFRFG------------NVAYCTD---VNAFPAESL 195 G + + H G + G V Y D S+ Sbjct: 161 AIALGVPVGPLFSKLHHGGSVEVDGNIISAEDVVGEPRPGRTVVYSGDTRPCLDVLEASV 220 Query: 196 EKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYD 247 D LI D+ L + H + E+ + K +LTH+ D Sbjct: 221 ----GADLLIHDSTLADDMLDWAKEAMHSTAGEAAALAKKAGVKKLVLTHISSRYSDDAT 276 Query: 248 MVLKSTP---SRVVPAFDGMQFSSP 269 ++L VV A D + P Sbjct: 277 LLLNDAKAIFEDVVIAEDLLVIEVP 301 >gi|209964092|ref|YP_002297007.1| ribonuclease Z, putative [Rhodospirillum centenum SW] gi|254808656|sp|B6IRV8|RNZ_RHOCS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|209957558|gb|ACI98194.1| ribonuclease Z, putative [Rhodospirillum centenum SW] Length = 308 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 97/318 (30%), Gaps = 92/318 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG GA+ VP RR S+L + ++R +VD G Sbjct: 2 FQLTFLGTGAT--VPSA--------------RRGLSALLVEHETDR-----FLVDCGEGT 40 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + V +D +L TH H DHI G+ L G Q + +Y + + + H+ Sbjct: 41 LRQIRQGGVGVRRLDRILLTHGHLDHILGLASLVGTLDLWDQADRLTLYGSEEAL-HIAR 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 DD P ++ I C G + H S GFRF Sbjct: 100 VLLDQVVWPDDH---PGLDVIYATLKPGRFCET---GGVAVTAFPVCHHETQSFGFRFEE 153 Query: 180 ----------------------------------------------------NVAYCTDV 187 ++A D Sbjct: 154 TEHRPLDGARLDALGVPEGRERHELAHAGAVTLADGRTVRREDALGPAERGTSLAVVGDC 213 Query: 188 NAFPAESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNAILTHMH 241 +E ++ +D L+I+A SH +++++ + + +LTH Sbjct: 214 GD-ADALVESVRGVDLLVIEATYRTADEATARSRSHLTVADACRLAQAAGVGRLVLTHQS 272 Query: 242 VDLDYDMVLKSTPSRVVP 259 D V +R P Sbjct: 273 DRYDPAEVEAEARARFEP 290 >gi|171322841|ref|ZP_02911557.1| coenzyme PQQ biosynthesis protein B [Burkholderia ambifaria MEX-5] gi|171091801|gb|EDT37312.1| coenzyme PQQ biosynthesis protein B [Burkholderia ambifaria MEX-5] Length = 307 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 107/321 (33%), Gaps = 71/321 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + G C RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCGNCRRARAGTDGIVPRTQSSIAVSGDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR +I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILAQ-LRADPDLQPARAIRDSAIVAVVLCDAQIDHVTGLLMLR----ERTSPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHG 169 + + L L V+ I ++ P + AGG A+P+ + Sbjct: 112 SAPVLDDLSTGLP-LVPLLGHYCG---VDVHPIAPSE-PFSIPGAGGIRFTAVPVASKPP 166 Query: 170 RI----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA----- 208 ++ + A Y + + +++ D +++D Sbjct: 167 PYSPRRAAAVPGDNIALLIEDAATGRQAFYAPGLADVDDDVRAAMRDADLVLVDGTFWTG 226 Query: 209 ---LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVDLDY----DM 248 + GL S H L++ I+ + P +LTH++ Sbjct: 227 TEMIDLGLSSKHAAEMGHLAQCGDAAQPGMIDRLRPLPAHTRKVLTHINNTNPILDPGSA 286 Query: 249 VLKSTPSR-VVPAFDGMQFSS 268 + A DGMQF Sbjct: 287 QRAQLREHGIEVAHDGMQFEV 307 >gi|170690055|ref|ZP_02881222.1| coenzyme PQQ biosynthesis protein B [Burkholderia graminis C4D1M] gi|170144490|gb|EDT12651.1| coenzyme PQQ biosynthesis protein B [Burkholderia graminis C4D1M] Length = 306 Score = 87.1 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 112/319 (35%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRRGTLKATRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ ++A Sbjct: 57 SPDLLAQIAANSELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLHAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI------L 165 + L F A Y + + + + G I+A+P+ Sbjct: 113 DAVWQDLTSGFP---IAPILSHYCGVEHRRIALDGAPLSVDALPGVQIDALPLTSKAPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 H G G V Y + LE ++ D L++D Sbjct: 170 SPHRNSPERGDNIGLVFTNRQTGKRVFYAPGLGEIEPHVLEAMRAADLLLVDGTLWTADE 229 Query: 209 -LKNGLHSSHF----SLSES-----LKKIELINPKNA--ILTHMHVDLDYDMVLKSTPS- 255 ++ GL L +S ++ ++ ++ K+A +L H++ ++++ P Sbjct: 230 MIRLGLSKKTAADMGHLQQSGPGGMIEVLDSLDAKSARKVLIHINNTNP--ILVEDGPER 287 Query: 256 ------RVVPAFDGMQFSS 268 + A+DGM F Sbjct: 288 RLLTEHGIEVAYDGMTFEL 306 >gi|154245746|ref|YP_001416704.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthobacter autotrophicus Py2] gi|154159831|gb|ABS67047.1| coenzyme PQQ biosynthesis protein B [Xanthobacter autotrophicus Py2] Length = 299 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 99/319 (31%), Gaps = 75/319 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 +LG A GVP+ C +P+ RT+SS+ +S V+++ Sbjct: 1 MQVIVLGSAAGGGVPQWNCRCPVCRMAWSGDPRVTPRTQSSIAVSADGSDW----VLLNA 56 Query: 61 GPDFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + E+ I AV+ T+ DHI G+ L++ +P ++ Sbjct: 57 SPDLRAQISATPALKPRMGERDSPIRAVVLTNGDVDHIAGL-----LSLRESQPFALFGT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + + L E+ F P P G +E + G++ Sbjct: 112 AETLGLLKEN--QVFD-----VVAPAFVSRTAAEFGRPFS-PVPGLTMEFFTVP---GKV 160 Query: 172 S----------------SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID---- 207 ++G + Y A E++ D L D Sbjct: 161 PLWREDASLVIGEETGSTVGVTITCADKRLVYIPGCAAVTPAVRERIVGADLLFFDGTLY 220 Query: 208 ----------ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDY-----DMV 249 K G H S+S ++ ++ + + H++ Sbjct: 221 RDDEMIEAGVGTKTGARMGHLSMSGDGGTVALLKDVPVARRVFIHINNTNPALVDGSQER 280 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + A DGM+FS Sbjct: 281 HAVEQAGWTVARDGMEFSL 299 >gi|172065176|ref|YP_001815888.1| coenzyme PQQ biosynthesis protein B [Burkholderia ambifaria MC40-6] gi|171997418|gb|ACB68335.1| coenzyme PQQ biosynthesis protein B [Burkholderia ambifaria MC40-6] Length = 307 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 71/321 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + G C RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCGNCRRARAGTDGIVPRTQSSIAVSGDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR +I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILAQ-LRADPDLQPARAIRDSAIVAVVLCDAQIDHVTGLLMLR----ERTSPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHG 169 + + L L V+ I + P + AGG A+P+ + Sbjct: 112 SAPVLDDLSTGLP-LVPLLGHYCG---VDVHPIAPGE-PFAIPGAGGIRFTAVPVDSKPP 166 Query: 170 RI----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA----- 208 ++ + A Y + + +++ D +++D Sbjct: 167 PYSPRRAAAVPGDNIALLIEDTATGRQAFYAPGLADVDDDVRAAMRDADLVLVDGTFWTG 226 Query: 209 ---LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVDLDY----DM 248 + GL S H L++ I+ + P +LTH++ Sbjct: 227 TEMIDLGLSSKHAAEMGHLAQCGDAAQPGMIDRLRPLPAHTRKVLTHINNTNPILDPGSA 286 Query: 249 VLKSTPSR-VVPAFDGMQFSS 268 + A DGMQF Sbjct: 287 QRAQLREHGIEVAHDGMQFEI 307 >gi|167588117|ref|ZP_02380505.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia ubonensis Bu] Length = 307 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 110/324 (33%), Gaps = 77/324 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCANCRRARNGAGDVVPRTQSSIAVSDDGIDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDLLSQ-LRANPDLQPARAIRDSGIAAVVLCDAQIDHVTGLVMLR----ERSTPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHG 169 + L L V+ I + P + +AGG AIP+ + Sbjct: 112 TAPVLDDLSTGLP-LVPLLGHYCG---VDVHTIALGE-PFSVPAAGGIRFTAIPVDSKAP 166 Query: 170 RI----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA----- 208 ++ +VA Y + A + +++ D +++D Sbjct: 167 PYSPRRASAAPGDNVALSIEDVASGRRAFYAPGLAAVTDDVRAAMRDADLVLVDGTFWTG 226 Query: 209 ---LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDL 244 + GL S H L++ + ++ + + +LTH++ Sbjct: 227 AEMIDLGLSSKHAADMGHLAQCAEHGQPGMIDWLDALPARTRKVLTHINNTNPILDPHSA 286 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 ++ + + A DGMQF Sbjct: 287 EHARLRA---HGIDVAHDGMQFQV 307 >gi|115360906|ref|YP_778043.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia ambifaria AMMD] gi|115286234|gb|ABI91709.1| coenzyme PQQ biosynthesis protein B [Burkholderia ambifaria AMMD] Length = 307 Score = 86.7 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 105/321 (32%), Gaps = 71/321 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + G C RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCGNCRRARAGTDGIVPRTQSSIAVSGDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR +I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILAQ-LRADPDLQPARAIRDSAIVAVVLCDAQIDHVTGLLMLR----ERTSPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHG 169 + + L L V+ I + P + AGG A+P+ + Sbjct: 112 SAPVLDDLSTGLP-LVPLLGHYCG---VDVHPIAPGE-PFAIPGAGGIRFTAVPVDSKPP 166 Query: 170 RI----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA----- 208 ++ + A Y + + +++ D +++D Sbjct: 167 PYSPRRAAAVPGDNIALLIEDTATGRQAFYAPGLADVDDDVRAAMRDADLVLVDGTFWTG 226 Query: 209 ---LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVDLDY----DM 248 + GL S H L++ I+ + P +LTH++ Sbjct: 227 TEMIDLGLSSKHAAEMGHLAQCGDAAQPGMIDRLRPLPAHTRKVLTHINNTNPILDPGSA 286 Query: 249 VLKSTPSR-VVPAFDGMQFSS 268 + A DGMQ Sbjct: 287 QRAQLREHGIEVAHDGMQIEI 307 >gi|225573216|ref|ZP_03781971.1| hypothetical protein RUMHYD_01407 [Blautia hydrogenotrophica DSM 10507] gi|225039348|gb|EEG49594.1| hypothetical protein RUMHYD_01407 [Blautia hydrogenotrophica DSM 10507] Length = 274 Score = 86.3 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 96/290 (33%), Gaps = 46/290 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 I+G G +P C+ K R S+ I + +++DT Sbjct: 1 MRLKIVGSGGMFQIPNPFCKCPICEEARTKRGKYERLGPSIYIE-------DIQMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRPIDVYAAPDCMKH 117 D + R+ + I + +H DH G+ + + I A P+ + Sbjct: 54 EDIGVACDRQGISEIKYLSISHKDPDHTRGMRIVEPLGYDCIADRGTSIQFIALPEVVDD 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS--SLG 175 + + Y I++ I I D +K I + G ++ + Sbjct: 114 IN-----AWNGDGLYYYQNILHCISITKTD---YIKIGNIEIHLVNNKTHRGNMTFYVIS 165 Query: 176 FRFGNVAY-CTDVNAFPAESLEKLQNLDFLII------------DALKNGLHSSH-FSLS 221 R Y C DV F L + D LI+ + LKN F++ Sbjct: 166 DRNKKAIYACCDVKPFVHNELYF--DADVLIVGLVSDDGILKGGNLLKNAPFKDDMFTVD 223 Query: 222 ESLKKIELINPKNAILTHMH-----VDLDYDMVLKSTPSRVVPAFDGMQF 266 E ++ K I+TH+ DY V ++ V A+DGM+ Sbjct: 224 EIMEIKHKYRIKQIIVTHIDEYWGKSYADYQKVEETL-ENVSFAYDGMEI 272 >gi|159040998|ref|YP_001540250.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis IC-167] gi|157919833|gb|ABW01260.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167] Length = 237 Score = 86.3 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 28/215 (13%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLR 96 S+ + R +++D G Y Q+ R V SIDAV+ TH H DHI G+ Sbjct: 7 PSILVEAKGVR-----LLLDAGEGSYRQLRRCTGLDVDSIDAVIVTHGHGDHILGLPSYV 61 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + V A M L KA + Y +NPI ++ + P + Sbjct: 62 LMAGSRGIRLSVIAPRYVMDDLVS----LIKATHIQQYVNALNPIPVDTPNEPSFIMEFK 117 Query: 157 GVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESL-EKLQNLDFLIIDA-- 208 G I + H + ++ + + + Y D P+ SL E + LI +A Sbjct: 118 G-IRIYAVKVNH-TVEAMAVKLIDSDGSCLTYSGDTA--PSRSLVELAKGCGVLIHEASG 173 Query: 209 ---LKNGLH-SSHFSLSESLKKIELINPKNAILTH 239 + H H ++ +++ K +LTH Sbjct: 174 NPGFEEEAHRHGHSTVRDAVNIAREAGVKQLVLTH 208 >gi|217977332|ref|YP_002361479.1| coenzyme PQQ biosynthesis protein B [Methylocella silvestris BL2] gi|217502708|gb|ACK50117.1| coenzyme PQQ biosynthesis protein B [Methylocella silvestris BL2] Length = 299 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 46/321 (14%), Positives = 102/321 (31%), Gaps = 79/321 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + + + R++SSL +S E ++++ Sbjct: 1 MRILVLGSAAGGGFPQWNCNCPVCQLAWSGDKRVKARSQSSLAVSADGEHW----LLLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q++ + L I AV T+ DH+ G+ L++++ V+ + Sbjct: 57 SPDLRQQIINQPALHPRGASRQSPISAVFVTNGDIDHLAGL-----LTLREQQSFTVFGS 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGR 170 + + + + ++N +++ + V + G ++ P G+ Sbjct: 112 GATLAQV-----------EGASVFGVLNRDLVDLHPVELDATVDTGVGLKVTPFPVP-GK 159 Query: 171 IS----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 I ++G + Y + +L D L D Sbjct: 160 IPLYLEGDNVDVGAEGESTIGLEISDGVKTFFYVPGCSDINERVFNRLAGADVLFFDGTT 219 Query: 209 --------LKNGLHSSHF--SLSESLK------KIELINPKNAILTHMHVDL-----DYD 247 L ++H ++ S + + H++ D Sbjct: 220 YTDDEMVVLGLSPKTAHRMGHVAMSGENGSVARFASGAIARKIY-VHINNTNPVLIEDSK 278 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + A+DGM+ + Sbjct: 279 ERASVVKAGWDVAYDGMEVTL 299 >gi|309791231|ref|ZP_07685763.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308226793|gb|EFO80489.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 251 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 88/270 (32%), Gaps = 51/270 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 H +LG G GVP + +N + + G +++D G Y Sbjct: 3 HIILLGTGT--GVP----------DADREN---------THMVWDGPGGPLLIDAGGSTY 41 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFES 121 ++LR + + + TH H DHI+G+ GL R P+ +Y ++ + Sbjct: 42 QRLLRAGLNPQQLQGIFLTHTHCDHINGLAGLLFSMRLAGRTDPLPIYGLVPTLQLVQA- 100 Query: 122 FRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 A Y PPI+ + ++ + + H R L + Sbjct: 101 ---ILAAFALEKYQPPIIWNELSSGQEIDLSE-----GWRIQTAMTAHSR-PCLALKIVG 151 Query: 179 ----GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPK 233 + Y D P + L Q LI +A H S ++ + K Sbjct: 152 PGQNEQLTYSADTE--PCADVAALAQGSSVLIHEATTPTPFPGHTSPRQAGEVALAAGAK 209 Query: 234 NAILTH------MHVDLDYDMVLKSTPSRV 257 IL H M D + + S S V Sbjct: 210 RLILVHYSPQWTMPEDAAHAEIRASGYSGV 239 >gi|157147972|ref|YP_001455291.1| hypothetical protein CKO_03779 [Citrobacter koseri ATCC BAA-895] gi|157085177|gb|ABV14855.1| hypothetical protein CKO_03779 [Citrobacter koseri ATCC BAA-895] Length = 126 Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL--- 209 ++ P+ H ++ + G+ VA+ +D A P ++++ L N ++ID Sbjct: 8 LQVTPLPLNHSKL-TFGYLLESAHSRVAWLSDTAALPDKTVKFLLNNQPQTIVIDCSHAP 66 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + +H ++ + E+I+ ILTH+ D ++ S P + +DGM+ Sbjct: 67 RAEAPRNHCDVNTVIALNEVIHCPRVILTHISHSFDVWLMDNSLPGGIEAGYDGMEI 123 >gi|239502595|ref|ZP_04661905.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii AB900] Length = 303 Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 101/312 (32%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ PI+V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPINVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + V+P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQVDPKQAFKIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQSSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSR 256 K G H +S SL + +N +L H++ D + + Sbjct: 232 TGVGNKTGREMGHLYISGEGGSLSYLNQLNTPKKVLIHINNTNPILNEDSAQFAELKANG 291 Query: 257 VVPAFDGMQFSS 268 V AFDGMQ Sbjct: 292 VEVAFDGMQIEL 303 >gi|330813168|ref|YP_004357407.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486263|gb|AEA80668.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] Length = 106 Score = 85.6 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Query: 166 QQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 +HG ++G++ N +AY DV P ++++K+ N+ +LIID + H+ H SL E+L Sbjct: 1 MKHGSTKTIGYKINNDIAYIPDVKTIPKKTIKKILNIKYLIIDCFRTKEHNLHVSLKETL 60 Query: 225 KKIELINPKNAILTHMHVDLD--YDMVLKSTPSRVVPAFDGMQFSS 268 I LI P+ A LTHM DLD + P +DG++F+ Sbjct: 61 NYINLIKPEKAFLTHMSKDLDYNNLKNKLKKYKNIEPCYDGIKFNI 106 >gi|270261853|ref|ZP_06190125.1| coenzyme PQQ synthesis protein B [Serratia odorifera 4Rx13] gi|270043729|gb|EFA16821.1| coenzyme PQQ synthesis protein B [Serratia odorifera 4Rx13] Length = 303 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 102/312 (32%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK--NR--RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C K N RT+SS+ IS + V+ + Sbjct: 1 MQIKVLGSAAGGGFPQWNCNCKNCQGVRNKTLNASPRTQSSIAISDDGKNW----VLCNA 56 Query: 61 GPDFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L + I A++ T DH G+ LR V+ Sbjct: 57 SPDICQQLLAAPELNNPNVLRGTGIGAIILTDSQIDHSAGLLSLREGCPHH-----VWCT 111 Query: 112 PDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ L F + P+V + P +A ++ P ++ Sbjct: 112 PEVHDDLNTGFPVFTMLSHWNGGLIHHPVVPLASFQTAVCPGIRFTAVPLLSNAPPYSRY 171 Query: 169 GRISSLG----------FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---------AL 209 G R ++ Y + L LQ D L+ID A Sbjct: 172 RNRPLPGHNVALFIEDTLRGTSLLYAPGLGEPDEALLPWLQRADCLLIDGTLWRDNELAS 231 Query: 210 KNGLHSS-----HFSLSESLKKIELIN---PKNAILTHMHVD---LDYDMVLKS--TPSR 256 H++ H +L+E L++ K IL H++ LD + T + Sbjct: 232 LGVGHNTGKDMGHLALAEEQGLAALLSSLPAKRKILIHINNTNPILDEGSAERQSLTDAG 291 Query: 257 VVPAFDGMQFSS 268 + ++DGM Sbjct: 292 IEVSWDGMNIEL 303 >gi|254468085|ref|ZP_05081491.1| coenzyme PQQ biosynthesis protein B [beta proteobacterium KB13] gi|207086895|gb|EDZ64178.1| coenzyme PQQ biosynthesis protein B [beta proteobacterium KB13] Length = 304 Score = 85.6 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 110/317 (34%), Gaps = 70/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 H +LG GA G P+ + C N RT+SS+ +S E ++ + Sbjct: 1 MHIRVLGSGAGGGFPQWNCNCENCKGLRQHNIKSSARTQSSITVSSNGEDW----ILFNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I +++ DH G+ LR + +P D+Y Sbjct: 57 SPDIRAQIESFPPLQPARKVRDTGIASIIICDGQIDHTTGLLILR----EHDKPWDIYCT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPI------ 164 + + F F L VN ++ + P + A A+P+ Sbjct: 113 KSVHEDMTTGFP-IFNILGHFRG---VNWHEVKTDLKPFEIPKADDLEFTAVPLKSEAPP 168 Query: 165 --LQQHGRIS--SLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 +H + ++G+R N+ Y + + +++ D +++D Sbjct: 169 YSPHRHNTVPGDNVGYRVLDKKTGKNLFYAPGLGVIEDHVYDFMRDADVILVDGTVWTND 228 Query: 209 --LKNGLHSS------HFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVLKSTPS- 255 + G++ H S I+ + P+ IL H++ ++ + +P Sbjct: 229 EMSRFGINDKLASEMGHLDQSSKGGIIDTLTSLEKPRK-ILIHINNTNP--ILREDSPER 285 Query: 256 ------RVVPAFDGMQF 266 + ++DGM Sbjct: 286 QVLNSHGIEVSYDGMDI 302 >gi|284162424|ref|YP_003401047.1| ribonuclease Z [Archaeoglobus profundus DSM 5631] gi|284012421|gb|ADB58374.1| ribonuclease Z [Archaeoglobus profundus DSM 5631] Length = 305 Score = 85.2 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 95/324 (29%), Gaps = 85/324 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S VP R S++ I ++ D G Sbjct: 3 LKVTFLGT--SGTVPAPN--------------RNPSAILIQF-----EGIRLLFDCGEGT 41 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGID-------------GLRGYF----------- 99 Q++ + I +V TH H DH GI LR + Sbjct: 42 QRQMMIAKTGFKIHSVFITHLHTDHFIGIFGLIETMSLNERTERLRVFVPKENVDFMKTL 101 Query: 100 ------LKQKRPIDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICM 152 PI+VY D + F F+ FK P + +IE + Sbjct: 102 FRMFGYHNLNYPIEVYGLKDGDEVDFGKFKILAFKTDHI---VPSLGYALIERDRPGKFD 158 Query: 153 KSAGGVIEAIPILQQ-----------HGRISSLGFRFG------NVAYCTDVNAFPAESL 195 ++ + P +GRI + G V Y D ++ Sbjct: 159 RAKAEALGIPPGPLYSKLVRGEAIEINGRIITPDMVVGPKRRGRKVVYTGDTRP-TERTI 217 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD-- 247 E ++ D LI DA + + H + E+ + + N + ILTH+ D Sbjct: 218 EVARDADLLIHDASFTSDLQDWAIQTKHSTAREAAEIAKRANVRQLILTHISARYSKDAT 277 Query: 248 ---MVLKSTPSRVVPAFDGMQFSS 268 K VV A D M Sbjct: 278 PLLEEAKEIFENVVVAEDFMSIEV 301 >gi|196248156|ref|ZP_03146858.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|196212940|gb|EDY07697.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 277 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 37/237 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V +DAV+ +H H DHI I L+ L K Sbjct: 58 EHDGFRLLVDCGSGALAKLQNYTTVEDLDAVILSHYHYDHIADIGPLQYARLIHKTLGAD 117 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + E + A G Sbjct: 118 LPVLPIYG----------------HTEDEEAFERLTHNGITEGIAYDPKGELAVGPFSIT 161 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R + Y D + P + + D LI + +N Sbjct: 162 FLKTVH-PVPCYAMRITAGDNTIVYTADSSYIPEF-VPFAKGADLLICECNFYAGQNAAP 219 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGMQFS 267 + H + E+ E LTH+ ++ +++ + A G+ + Sbjct: 220 AGHMTSEEAATIAEGAGVGELWLTHLPHIGRHEQLIEEAGRTFRGVIRLARTGLVWE 276 >gi|301118470|ref|XP_002906963.1| zinc phosphodiesterase, putative [Phytophthora infestans T30-4] gi|262108312|gb|EEY66364.1| zinc phosphodiesterase, putative [Phytophthora infestans T30-4] Length = 690 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 99/306 (32%), Gaps = 60/306 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVIVDTGPDF 64 +LG G++ P R S + + ++ +++VD G Sbjct: 404 KLIVLGTGSAA----------------PSKLRASSGIYLELSGTNAADVESMLVDCGEGT 447 Query: 65 YMQVLR-------EQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKR-------PIDV 108 Y Q+ R E++ + + +H HADH G+ + ++ +R + V Sbjct: 448 YGQLWRQFGDEVAERIGGLRCIWISHNHADHHCGLVRVLYEFWYFHMRRKDGNSSHSLVV 507 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI----CMKSAGGVIEAIPI 164 A + ++ + D + N P+ + + V + Sbjct: 508 VAPQSVLSYVESWLPQFLRNDSDYQLIRLATCETFNNPRHPLRCQLLAEISYAVTSITSV 567 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGL 213 H S G + Y D L + + L+ +A ++ Sbjct: 568 RVFHC-YDSYGLVLTLQGGKKLVYSGDTKPCNDLVLAGM-GAELLVHEATFDDSMEQDAK 625 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVD--------LDYDMVLKSTPSRVVPAFDGMQ 265 H ++ ++L + + + ILTH LD P+ V+ A+DG Sbjct: 626 MKKHSTVGQALDIAQRMRARQVILTHFSQRYPALPPPVLDSSERSSIDPATVLCAYDG-- 683 Query: 266 FSSPIP 271 F P+P Sbjct: 684 FVHPMP 689 >gi|52549192|gb|AAU83041.1| metallo-beta-lactamase [uncultured archaeon GZfos26D6] Length = 335 Score = 85.2 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 95/289 (32%), Gaps = 75/289 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S P R S++ ++R E ++ D G Sbjct: 30 LRITFLGTGGSTPTP----------------NRNPSAIAVNREGEL-----ILFDCGEGA 68 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE- 120 Q++R + I ++ +H HADH+ GI GL ++ P+++Y K L+ Sbjct: 69 QQQMMRAKSGMKITSIFISHFHADHVLGIPGLLQTMALQDRQEPLEIYGPKQVDKFLYHL 128 Query: 121 -SFRYC---FKALDDRTYPPIV---NPIVIENNDVPICMKSAGGVIE--AIPILQQHGRI 171 + Y F+ P V I + S G V+E P + Sbjct: 129 LALGYAGRNFEVKAIELRPGDVVRRAGYEIRVIKTVHNIPSIGYVLEEDMRPGRFNREKA 188 Query: 172 SSLGFRFG--------------------------------NVAYCTDVNAFP-AESLEKL 198 LG + G + Y D P +E Sbjct: 189 IELGIKPGPFFSKLQSGRSILLDGKEIRPEQVVGPPRPGRKIVYTGDTR--PCDSVIEAS 246 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D LI D+ + ++ H + E+ + + + + ILTH+ Sbjct: 247 ENADLLIHDSTLSEETKEYAINYMHSTALEAAEVAKKASVRKLILTHIS 295 >gi|198415293|ref|XP_002130754.1| PREDICTED: similar to ELAC2 [Ciona intestinalis] Length = 727 Score = 85.2 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 104/298 (34%), Gaps = 59/298 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +Y +LG G P R + + NT++++D Sbjct: 406 MSEYPRLVVLGSGG----------------NMPHKYRAFPAYLLRV----DPNTSILMDC 445 Query: 61 GPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRPIDV 108 G Y Q+ R + +I ++ TH H DH G + + +++ + + Sbjct: 446 GDGTYTQLYRHFGATNIKKILKTIKVIVLTHRHIDHFIGVVHLLKQIASSVPRKRDKVSI 505 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI----EAIPI 164 +A + +F + F +D + + IE ++S + + Sbjct: 506 FAP-----GMLRNFLFGFIHQNDHSLLEYLYFSAIEKYLTDDYLQSYVRRVLNVESLTFV 560 Query: 165 LQQHGRIS-----SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNG 212 HG + +G R V Y +D LE+ + D LI D + Sbjct: 561 PVVHGVRTFGLSLVVGGR--KVVYSSDTAPMVPGLLEEGRGADLLIHDCTYTQPKDFRLA 618 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDY--DMVLKSTPSR--VVPAFDGMQF 266 H+ H +L +++ E + K+ +L H V + + P +V A+D M+ Sbjct: 619 EHNMHSTLEGAIQTAETMEAKSLLLNHFGVKEPMVPPIEESTVPYNGTIVTAYDHMEI 676 >gi|90417327|ref|ZP_01225253.1| coenzyme PQQ synthesis protein B [marine gamma proteobacterium HTCC2207] gi|90330912|gb|EAS46175.1| coenzyme PQQ synthesis protein B [marine gamma proteobacterium HTCC2207] Length = 310 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 61/318 (19%), Positives = 103/318 (32%), Gaps = 70/318 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C +N RT+SS+ +S V+ +T P Sbjct: 5 VLGSAAGGGFPQWNCNCANC--AGLRNGSINAKARTQSSIAVSSDGINW----VLFNTSP 58 Query: 63 DFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + L I A++ DH G+ L++ P DVY Sbjct: 59 DIRAQLADFEPLQPARQLRDTGISAIVLMDSQIDHTTGL-----LMLREGCPHDVYCTDM 113 Query: 114 CMKHLFESFRYCFKALD----DRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPIL--- 165 ++ L F F L + PI+ + + + G A+P+L Sbjct: 114 VLEDLSSGFP-LFSMLKHWNGGLQHRPILLNKDDHTQEGSFTIPNIDGLRFHAVPLLSKA 172 Query: 166 ---QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 H +G G N+ Y + ++ +Q D L++D Sbjct: 173 PPYSPHRNNPHVGDNIGIRIEDTRSGKNLFYSPGLGEPEPHIIKLMQRADCLLVDGTFWR 232 Query: 213 LHSSHF------------SLSESLK--KIELINP---KNAILTHMHVDL-----DYDMVL 250 F L +S + IEL+ P +L H++ D + Sbjct: 233 EDEMAFAGVGTKLAAEMGHLPQSGENGMIELLRPMKKPRKVLIHINNTNPILIEDSEQRA 292 Query: 251 KSTPSRVVPAFDGMQFSS 268 + A+DGM Sbjct: 293 ILNKEGIEVAYDGMDIEL 310 >gi|268610450|ref|ZP_06144177.1| ribonuclease Z [Ruminococcus flavefaciens FD-1] Length = 304 Score = 84.8 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 102/330 (30%), Gaps = 95/330 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G +P K+R +SL + + + V++D G Sbjct: 3 EICLLGTG--GMLPL-------------KDRFL-TSLYVEQ-----NGKAVLIDCGEGTQ 41 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLFES 121 + + + ++A+L TH HADH+ G+ G L + P+D+Y C+ + Sbjct: 42 VAMGMHGLKMSRVEALLITHDHADHVTGLPGLLLSIGNCSRTEPLDIYLPESCVNAVKSL 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 C Y +++ + + + ++ ++ + +H +G+ F Sbjct: 102 MSVCGYLP----YEVVLHTLSVSEGES-FKIERIDPLLTVNTLPLKHST-KCIGYSFEFY 155 Query: 180 --------------------------------------------------NVAYCTDVNA 189 + Y TD Sbjct: 156 RKPVFAPEKAKALGVPVQMWKKLHAGEDVTLDDGTVITQEQVTGEQRAPLKITYTTDTCP 215 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHV 242 + +N D + + + + H + ++ + + N K LTH Sbjct: 216 L-DSIVPFAENADLFVCEGMYGTMDKKQSMDEKGHMLMQDACELAKKANAKRLWLTHYSP 274 Query: 243 DLD----YDMVLKSTPSRVVPAFDGMQFSS 268 Y+ LK+ V + DGM+ S Sbjct: 275 AEKEPAVYEDELKAIFPEVSVSVDGMKISL 304 >gi|268323331|emb|CBH36919.1| ribonuclease Z [uncultured archaeon] Length = 335 Score = 84.4 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 95/289 (32%), Gaps = 75/289 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S P R S++ ++R E ++ D G Sbjct: 30 LRITFLGTGGSTPTP----------------NRNPSAIAVNREGEL-----ILFDCGEGA 68 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE- 120 Q++R + I ++ +H HADH+ GI GL ++ P+++Y K L+ Sbjct: 69 QQQMMRAKSGMKITSIFISHFHADHVLGIPGLLQTMALQDRQEPLEIYGPKQVDKFLYHL 128 Query: 121 -SFRYC---FKALDDRTYPPIV---NPIVIENNDVPICMKSAGGVIE--AIPILQQHGRI 171 + Y F+ P V I + S G V+E P + Sbjct: 129 LALGYAGRNFEVKAIELRPGDVVRRAGYEIRVIKTVHNILSIGYVLEEDMRPGRFNREKA 188 Query: 172 SSLGFRFG--------------------------------NVAYCTDVNAFP-AESLEKL 198 LG + G + Y D P +E Sbjct: 189 IELGIKPGPFFSKLQSGRSILLDGKEIRPEQVVGPPRPGRKIVYTGDTR--PCDSVIEAS 246 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D LI D+ + ++ H + E+ + + + + ILTH+ Sbjct: 247 ENADLLIHDSTLSEETKEYAINYMHSTALEAAEVAKKASVRKLILTHIS 295 >gi|300710119|ref|YP_003735933.1| ribonuclease Z [Halalkalicoccus jeotgali B3] gi|299123802|gb|ADJ14141.1| ribonuclease Z [Halalkalicoccus jeotgali B3] Length = 306 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 102/326 (31%), Gaps = 80/326 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG S VP RR S + ++R E ++ D G Sbjct: 2 TLRVTFLGT--SGAVPTA--------------RRNPSGIYLNREGEE-----LLFDCGEG 40 Query: 64 FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL-- 118 Q++R SI A+ TH H DH+ G+ GL F + P+ V+ + + Sbjct: 41 TQRQMMRFSTGFSISAIFLTHVHGDHVLGLPGLLQTLDFNDRADPLVVHTPRGTRRTVED 100 Query: 119 -------FESFR-----------------YCFKALDDRTYPPIVNPIVIE---------- 144 F Y +A V +++E Sbjct: 101 LVGALDARLGFPVEVREVAPGEVVRDGEDYEIQAFRTDHRTHSVGYVLVEADRKGRFDRE 160 Query: 145 -NNDVPICMKSAGGVIEA-IPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLE 196 ++ + + A G + A P+ G + G V Y D E+++ Sbjct: 161 RAEELGVPVGPAFGRLHAGEPVELADGTVIKPEQVVGSPRPGRRVVYTGDTRP-TEETVD 219 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDM 248 ++ D LI DA + + H S E+ + K LTH+ D Sbjct: 220 ASEDADLLIHDATFGDDWAERARETGHSSAREAGELAARTGVKRLALTHISSRYAGDASR 279 Query: 249 VLKSTPSRVVPAF---DGMQFSSPIP 271 + AF DG++ P P Sbjct: 280 LANEASEEHHEAFVAEDGLEIEVPFP 305 >gi|198244580|ref|YP_002215040.1| hypothetical protein SeD_A1184 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939096|gb|ACH76429.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622794|gb|EGE29139.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 312 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLT-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|221212006|ref|ZP_03584984.1| coenzyme PQQ biosynthesis protein B [Burkholderia multivorans CGD1] gi|221168091|gb|EEE00560.1| coenzyme PQQ biosynthesis protein B [Burkholderia multivorans CGD1] Length = 307 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 108/320 (33%), Gaps = 69/320 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C RT+SS+ +S V+V+ Sbjct: 1 MKIRILGSGAGGGLPQWNCNCANCRRARAGTDGIVPRTQSSIAVSSDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AV+ DH+ G+ LR ++ P+ +YA+ Sbjct: 57 SPDILAQLRTAPELQPARAVRDSGIVAVVLCDAQIDHVTGLLMLR----ERTSPLPLYAS 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGR 170 + L + L V+ I ++ P + AGG A+P+ + Sbjct: 113 APVLDDLSTALP-LVPLLGHYCG---VDAHTIALHE-PFAIPGAGGIRFTAVPVDSKAPP 167 Query: 171 I----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++ +VA Y + +Q D +++D Sbjct: 168 YSPRRAAAVPGDNVALLIEDVASGRRAFYAPGLADVDDRVQAAMQGADLVLVDGTFWTGT 227 Query: 209 --LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVD---LDYDMVL 250 ++ GL + H L++ I+ + +LTH++ LD Sbjct: 228 EMIELGLSAKHAADMGHLAQRGDGMRPGMIDRLRALPAQTRKVLTHINNTNPILDPASAE 287 Query: 251 KS--TPSRVVPAFDGMQFSS 268 ++ + A DGM F Sbjct: 288 RAHLHGHGIEVAHDGMHFEV 307 >gi|254490530|ref|ZP_05103716.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxidans DMS010] gi|224464274|gb|EEF80537.1| metallo-beta-lactamase superfamily, putative [Methylophaga thiooxydans DMS010] Length = 295 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 96/297 (32%), Gaps = 55/297 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG- 61 D T+LG G +P I R SS I + D G Sbjct: 22 DELTVTLLGTGTP--IPSI--------------ERFGSSTLIEHKG-----KYFLFDVGR 60 Query: 62 -PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDC---M 115 + + ID + TH H+DHI G D G ++ ++VY + Sbjct: 61 GATIRLSQIGMYPSDIDNIFLTHLHSDHITGFDDFWITGGIWQRANTLNVYGPDGTKSFV 120 Query: 116 KHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-S 173 +H +F F + + + + ++ + ++ HG + + Sbjct: 121 EHTQGAFSLDAFYREKQSSL--NLKGLEVNVTEIKEGLIYDEDGLKVSAFRVDHGAVEHA 178 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI--IDALKNGLHSS----------H 217 G+R +V D + + Q LD LI + ++ L S H Sbjct: 179 YGYRIDSDRHSVLISGDT-TYSENLIANSQELDLLIHEVSVIEPKLLQSNPKLKSISKYH 237 Query: 218 FSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 SL + K +E + P+ +L H+ +L + + K + D M Sbjct: 238 TSLQQLHKLVEKVKPQKTVLNHLLLIGSDETELSHLLETKFQDKNIDVGHDLMTIHL 294 >gi|320159911|ref|YP_004173135.1| ribonuclease Z [Anaerolinea thermophila UNI-1] gi|319993764|dbj|BAJ62535.1| ribonuclease Z [Anaerolinea thermophila UNI-1] Length = 306 Score = 84.0 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 88/299 (29%), Gaps = 90/299 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG AS P +R S+ + + + ++D G Sbjct: 2 FEITFLGTSASA----------------PSVKRGLSAQLV-----KHNEYRFLIDCGEGT 40 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDVYAAPDCMKHLFE 120 Q+L+ + ++ +L TH H DHI G+ GL F++ +++Y ++ + + Sbjct: 41 QRQILQAGLGFKRLNHILITHGHLDHILGLAGLLSTFMRWETIDHLEIYGPRSALERIDD 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R P + +I + + G H SLG+ F Sbjct: 101 ----LLTRVVLRGARPPMPLTLI---PITPGVFFEGDDFRVSAFPVHHRGSESLGYLFEE 153 Query: 179 ---------------------------GNVAYCTDVNAFPA------------------- 192 G + D Sbjct: 154 RSRRPFLPEKADALGVPAGPLRRDLVEGRAVHLPDGRTITPDMVLGEERPGTRLVHVGDC 213 Query: 193 -ESLEKL---QNLDFLIIDAL-----KNGLHS-SHFSLSESLKKIELINPKNAILTHMH 241 E+ L D L+I+A + H SH + + + + K LTH+ Sbjct: 214 GETESLLGVVSGADGLVIEATYLEEEREMAHQFSHLTARMAAELAQRAGVKALYLTHLS 272 >gi|330508890|ref|YP_004385318.1| ribonuclease Z [Methanosaeta concilii GP-6] gi|328929698|gb|AEB69500.1| ribonuclease Z [Methanosaeta concilii GP-6] Length = 305 Score = 83.6 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 98/290 (33%), Gaps = 76/290 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG SL P R S++ I+R E ++ D G Sbjct: 2 LNVTFLGTAGSLPTPE----------------RNPSAILINREGE-----MLLFDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCM----- 115 Q++R ++ ++ + TH HADHI GI GL F + PI + Sbjct: 41 QRQMMRARTGMMRLNYIFLTHLHADHILGIPGLLETMAFQGRVEPITIAGPIHTARLVEC 100 Query: 116 --------------------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + + Y +A++ R P + ++ E+ + + A Sbjct: 101 FKSVCYFSRNFEVIALELSPEDVVKMKGYQVRAIETRHSVPSLGYVLEEDQRLGRFDRDA 160 Query: 156 GGVIEAIPIL----QQHGRISSLGFRF-------------GNVAYCTDVNAFPAESLEKL 198 + P QHG ++ R V Y D P S+E Sbjct: 161 AISLGVPPGPLFGRLQHGHEVAVEGRVVQPQQVMGPPRPGRKVVYTGDTR--PCRSVEDA 218 Query: 199 -QNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + D LI D ++ + + H + E+ + ++ ILTH+ Sbjct: 219 GRGADLLIHDSALASDMIEWAMETKHSTAKEAAELARRAGVRHLILTHIS 268 >gi|167552629|ref|ZP_02346381.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322787|gb|EDZ10626.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 312 Score = 83.6 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|323484256|ref|ZP_08089624.1| hypothetical protein HMPREF9474_01375 [Clostridium symbiosum WAL-14163] gi|323402408|gb|EGA94738.1| hypothetical protein HMPREF9474_01375 [Clostridium symbiosum WAL-14163] Length = 274 Score = 83.6 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 96/294 (32%), Gaps = 50/294 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I G G +P C+ K R R SL I + +++DT Sbjct: 1 MKLKIAGSGGMFQIPNPFCKCPICEEARIKRGRYERLGPSLYIE-------DIHMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKH 117 D + R+ + I+ + +H DH G+ + + P+ A P + Sbjct: 54 EDIAVACDRQGISKIEYLSISHKDPDHTRGMRIVEPLGYNCITDRGTPVQFIALPGVVDD 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + Y +++ I I D G IE + + R + + Sbjct: 114 IN-----AWNGDGLYYYENVLHCISITRTDF-----IKIGKIEIHLVNNKTHRGNMTFYV 163 Query: 178 FGN----VAY-CTDVNAFPAESLEKLQNLDFLIID------------ALKNGLHSSH-FS 219 + V Y C DV F E + D LII AL + F+ Sbjct: 164 ISDGDKKVIYACCDVKPFVFN--ELYYDADILIIGLVSDDGMLKEGRALDDAPFKDDMFT 221 Query: 220 LSESLKKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQFSS 268 L E L+ K I+TH+ Y KS + A+DGM+ + Sbjct: 222 LEELLEIKHTYRIKRIIITHIDEYWGKSYAYYREFEKSL-DNISFAYDGMEITL 274 >gi|169795965|ref|YP_001713758.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii AYE] gi|294838036|ref|ZP_06782719.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. 6013113] gi|294857810|ref|ZP_06795579.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. 6013150] gi|301513621|ref|ZP_07238858.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii AB058] gi|226704950|sp|B0V497|PQQB_ACIBY RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|169148892|emb|CAM86763.1| coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) [Acinetobacter baumannii AYE] Length = 303 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 102/312 (32%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ PI+V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPINVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + ++P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD---LDYDMVL-KSTPSR- 256 K G H +S SL + ++ +L H++ L+ D + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKAND 291 Query: 257 VVPAFDGMQFSS 268 V AFDGMQ Sbjct: 292 VEVAFDGMQIEL 303 >gi|257388166|ref|YP_003177939.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257170473|gb|ACV48232.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 256 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 91/284 (32%), Gaps = 53/284 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R +S L + + ++VD G Sbjct: 1 MRLTFLGTGSAM----------------PTGTRFQSGLLLE-----DGSDRLLVDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYAAPDCMKHLFES 121 + R V +D VL TH H DH+ +D ++ +L + + P + Sbjct: 40 LHALERTDVGYEGVDTVLLTHHHLDHVSDLDVFMKARWLAGDTDLTIAGPPGTRDLIE-- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 LD Y + I+ V AG IEA+ + +RF Sbjct: 98 -----GLLDLHGYMRGRLDLTIDEVGVDEPFTLAGFDIEAMETRH---SMQCFAYRFQAG 149 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELI 230 + Y D AF +E L+ D H + L L + E Sbjct: 150 GEEPALVYSGDSEAFTEL-IEFADRAAVLVHDCSFPDEVDVSNHPTPAQLGTVLDRAE-A 207 Query: 231 NPKNAILTHM--HVDLDYDMV----LKSTPSRVVPAFDGMQFSS 268 LTH+ H + ++ + S V A DG+ + Sbjct: 208 AVGRVYLTHLYPHTEGRHEEMLDSIAASYDGDVRFAADGLSVTI 251 >gi|294494977|ref|YP_003541470.1| RNAse Z [Methanohalophilus mahii DSM 5219] gi|292665976|gb|ADE35825.1| RNAse Z [Methanohalophilus mahii DSM 5219] Length = 312 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 91/290 (31%), Gaps = 76/290 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G +L P R SS+ ++R E ++ D G Sbjct: 10 LRVVFLGTGGAL----------------PTVNRNPSSILVNRDGEL-----LLFDCGEGT 48 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDC------ 114 Q++R ++S+ ++ +H HADH+ GI GL F + P+ +Y Sbjct: 49 QQQMMRARTGMMSLSSIFISHFHADHVLGIPGLLQTLSFHGRDTPLTIYGPVWVEQFVKL 108 Query: 115 ---MKHLFESF----------------RYCFKALDDRTYPPIVNPIVIENNDV------- 148 + + +F Y A+ P + ++EN Sbjct: 109 VSLLGYCRLNFEVKAVPLEAGDVVQREGYVVNAIASEHSVPSLAYALVENERPGKFDRRR 168 Query: 149 ---------PICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFP-AESLEK 197 P+ + G + H R G + Y D P LE Sbjct: 169 AEEMGVPVGPLYSRLQKGESVEVNGRIIHPNEVIGPSRRGRKLIYTGDTR--PCEAILEA 226 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D LI D S H + +E+ + K ILTH+ Sbjct: 227 SKNADVLIHDGTLAQEKADWARESLHSTANEAADVAKKAGVKRLILTHIS 276 >gi|326627307|gb|EGE33650.1| Metallo-beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 312 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAIHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|161522989|ref|YP_001585918.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia multivorans ATCC 17616] gi|189348182|ref|YP_001941378.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia multivorans ATCC 17616] gi|160346542|gb|ABX19626.1| coenzyme PQQ biosynthesis protein B [Burkholderia multivorans ATCC 17616] gi|189338320|dbj|BAG47388.1| pyrroloquinoline quinone biosynthesis protein B [Burkholderia multivorans ATCC 17616] Length = 307 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 109/320 (34%), Gaps = 69/320 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C RT+SS+ +S V+V+ Sbjct: 1 MKIRILGSGAGGGLPQWNCNCANCRRARAGTDGIVPRTQSSIAVSSDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AV+ DH+ G+ LR ++ P+ +YA+ Sbjct: 57 SPDILAQLRAAPELQPARAVRDSGIVAVVLCDAQIDHVTGLLMLR----ERTSPLPLYAS 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGR 170 + L + L V+ I ++ P + AGG A+P+ + Sbjct: 113 APVLDDLSTALP-IVPLLGHYCG---VDAHAIALHE-PFAIPGAGGIRFTAVPVDSKAPP 167 Query: 171 I----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++ +VA Y + +Q+ D +++D Sbjct: 168 YSPRRAAAAPGDNVALLIEDVASGRRAFYAPGLADVDDRVQAAMQDADLVLVDGTFWTGT 227 Query: 209 --LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVD---LDYDMVL 250 ++ GL + H L++ I+ + +LTH++ LD Sbjct: 228 EMIELGLSAKHAADMGHLAQRGDGMRPGMIDRLRALPAQTRKVLTHINNTNPILDPASAE 287 Query: 251 KS--TPSRVVPAFDGMQFSS 268 ++ + A DGM F Sbjct: 288 RAHLHGHGIEVAHDGMHFEV 307 >gi|213157300|ref|YP_002319345.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii AB0057] gi|301595353|ref|ZP_07240361.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii AB059] gi|226704947|sp|B7I6M5|PQQB_ACIB5 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|213056460|gb|ACJ41362.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii AB0057] Length = 303 Score = 83.6 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 102/312 (32%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ PI+V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPINVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + ++P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLLYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD---LDYDMVL-KSTPSR- 256 K G H +S SL + ++ +L H++ L+ D + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKAND 291 Query: 257 VVPAFDGMQFSS 268 V AFDGMQ Sbjct: 292 VEVAFDGMQIEL 303 >gi|184158115|ref|YP_001846454.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii ACICU] gi|294841770|ref|ZP_06786453.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. 6014059] gi|226704948|sp|B2I0I2|PQQB_ACIBC RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|183209709|gb|ACC57107.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Acinetobacter baumannii ACICU] gi|322508434|gb|ADX03888.1| pqqB [Acinetobacter baumannii 1656-2] gi|323518056|gb|ADX92437.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii TCDC-AB0715] Length = 303 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 95/315 (30%), Gaps = 63/315 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ P++V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPMNVWCT 111 Query: 112 PDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L F Y I + N + A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQIDPKQAFKINGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKST 253 K G H +S SL + ++ +L H++ + + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNENSAQFAELKA-- 289 Query: 254 PSRVVPAFDGMQFSS 268 + V AFDGMQ Sbjct: 290 -NGVEVAFDGMQIEL 303 >gi|71279293|ref|YP_267610.1| pyrroloquinoline quinone biosynthesis protein PqqB [Colwellia psychrerythraea 34H] gi|71145033|gb|AAZ25506.1| coenzyme PQQ synthesis protein B [Colwellia psychrerythraea 34H] Length = 305 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 99/317 (31%), Gaps = 65/317 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ C RT+SS+ +S + + +++ Sbjct: 1 MQILILGSAAGGGFPQWNCHCANCKGLRAGTIKATPRTQSSIAVSPDGKNWA----LINA 56 Query: 61 GPDFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + +I + T DH G+ L++ P+DVY + Sbjct: 57 SPDIRQQINQSPQLWPEQGARGTNIRGAILTDSQIDHTTGL-----ITLREGLPLDVYCS 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ F L+ + ++ I IE +P+ + Sbjct: 112 HVVYEDLTSAYP-LFNMLEH--WHGGLSFKPIGYQQSDAFSVEGVADIEFVPVTIESNAP 168 Query: 172 SSLGFRFGNVA------------------YCTDVNAFPAESLEKLQNLDFLIID------ 207 +R VA Y + E E L + ++ID Sbjct: 169 PYSKYRDKVVAGNNIGLKIVDKTSGKYLFYLPGIVESTPEVEEILADASCVLIDGTLWLD 228 Query: 208 --------ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD---LDYDMVLKS- 252 K G H ++ ++ + + IL H++ L+ + Sbjct: 229 DEMIAQGVGTKLGSQMGHMPVNGDFGTVALLNKFDIDRKILIHINNTNPILNEESAQHQF 288 Query: 253 -TPSRVVPAFDGMQFSS 268 + V A DGM+ + Sbjct: 289 VLDNGVEIAVDGMEITI 305 >gi|138894248|ref|YP_001124701.1| metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] gi|134265761|gb|ABO65956.1| Metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 244 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 37/237 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V +DAV+ +H H DHI I L+ L K Sbjct: 25 EHDGFRLLVDCGSGALAKLQNYTTVEDLDAVILSHYHYDHIADIGPLQYARLIHKTLGAD 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + E + A G Sbjct: 85 LPVLPIYG----------------HTEDEEAFERLTHNGITEGIAYDPKGELAVGPFSIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R + Y D + P + + D LI + +N Sbjct: 129 FLKTVH-PVPCYAMRITAGDNTIVYTADSSYIPEF-VPFAKGADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGMQFS 267 + H + E+ E LTH+ ++ +++ + A G+ + Sbjct: 187 AGHMTSEEAATIAEGAGVGELWLTHLPHIGRHEQLIEEAGRTFRGVIRLARTGLVWE 243 >gi|204930881|ref|ZP_03221754.1| putative metallo-beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320340|gb|EDZ05544.1| putative metallo-beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322616480|gb|EFY13389.1| hypothetical protein SEEM315_12773 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619731|gb|EFY16606.1| hypothetical protein SEEM971_17762 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622573|gb|EFY19418.1| hypothetical protein SEEM973_13195 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629724|gb|EFY26499.1| hypothetical protein SEEM974_04896 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632556|gb|EFY29302.1| hypothetical protein SEEM201_15135 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636949|gb|EFY33652.1| hypothetical protein SEEM202_01800 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641513|gb|EFY38151.1| hypothetical protein SEEM954_01803 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644815|gb|EFY41349.1| hypothetical protein SEEM054_22377 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649678|gb|EFY46109.1| hypothetical protein SEEM675_16329 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654022|gb|EFY50345.1| hypothetical protein SEEM965_12442 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658555|gb|EFY54817.1| hypothetical protein SEEM19N_16312 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663412|gb|EFY59614.1| hypothetical protein SEEM801_11602 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670146|gb|EFY66286.1| hypothetical protein SEEM507_18369 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674789|gb|EFY70880.1| hypothetical protein SEEM877_10637 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676740|gb|EFY72807.1| hypothetical protein SEEM867_07536 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682663|gb|EFY78682.1| hypothetical protein SEEM180_06577 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686343|gb|EFY82325.1| hypothetical protein SEEM600_05560 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195699|gb|EFZ80875.1| hypothetical protein SEEM581_02616 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199847|gb|EFZ84936.1| hypothetical protein SEEM501_09653 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202840|gb|EFZ87876.1| hypothetical protein SEEM460_08589 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209110|gb|EFZ94047.1| hypothetical protein SEEM020_20350 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212391|gb|EFZ97209.1| hypothetical protein SEEM6152_16550 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217930|gb|EGA02645.1| hypothetical protein SEEM0077_05834 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222217|gb|EGA06601.1| hypothetical protein SEEM0047_04534 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229732|gb|EGA13855.1| hypothetical protein SEEM0052_12877 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232957|gb|EGA17053.1| hypothetical protein SEEM3312_02829 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240692|gb|EGA24734.1| hypothetical protein SEEM5258_12439 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243006|gb|EGA27027.1| hypothetical protein SEEM1156_20279 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247526|gb|EGA31480.1| hypothetical protein SEEM9199_09814 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252698|gb|EGA36536.1| hypothetical protein SEEM8282_16463 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256725|gb|EGA40452.1| hypothetical protein SEEM8283_21777 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261675|gb|EGA45249.1| hypothetical protein SEEM8284_14215 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268064|gb|EGA51543.1| hypothetical protein SEEM8285_13531 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269914|gb|EGA53363.1| hypothetical protein SEEM8287_20964 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 312 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDISQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|11498544|ref|NP_069772.1| ribonuclease Z [Archaeoglobus fulgidus DSM 4304] gi|41017520|sp|O29323|RNZ_ARCFU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|2649658|gb|AAB90300.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 306 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 95/291 (32%), Gaps = 78/291 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S +P + R ++ + +R ++ D G Sbjct: 3 FKITFLGT--SGTIPSV--------------ERNSPAIFVQFGGQR-----MLFDCGEGT 41 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA-PDCMKHLF 119 Q++ + ++D + TH H DH G+ GL ++ R ++VY+ + ++ LF Sbjct: 42 QRQMMIAKTGFRNLDNIFITHLHTDHFIGLFGLIETMSLNERSRELNVYSPRAEVLRALF 101 Query: 120 ESFRY--------------------------CFKALDDRTYPPIVNPIVIENNDVPICMK 153 E+F Y F+ + + I+ + + Sbjct: 102 EAFGYDQLNYDIRVRELKDGEEVKFDGFKVVAFRT--EHIVKSVGYAIIENDRRGKFNRE 159 Query: 154 SAGGVIEAIPIL-----------QQHGRISS----LG--FRFGNVAYCTDVNAFPAESLE 196 A + P GR + LG R V Y D + ++E Sbjct: 160 KAEKELGIPPGPLYAKLARGESIVWKGRTITPDMVLGEKRRGRKVVYTGD-SRPTKRTVE 218 Query: 197 KLQNLDFLIIDALKNGLHS------SHFSLSESLKKIELINPKNAILTHMH 241 +N D LI DA H + E+ + N K ILTH+ Sbjct: 219 IARNADILIHDASFKEELKDWAIESGHSTAKEAAEVAREANVKKLILTHIS 269 >gi|290769886|gb|ADD61657.1| putative protein [uncultured organism] Length = 322 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 98/328 (29%), Gaps = 100/328 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G + +P +R +SL ++ T+++D G Sbjct: 28 MQLTLLGTGGTQPLP---------------DRAL-ASLAVTVQGH-----TLLLDCGEGT 66 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 + + + V IDAVL TH H DHI G+ GL L + P+ +Y P + + Sbjct: 67 QVSLRKYGVSSYRIDAVLLTHYHGDHILGLPGLLQTLASLNRTAPLTIYGPPG-QESIAA 125 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--- 177 + YP V + E K AG + P +H R+ G+R Sbjct: 126 A---IMALAGPLPYP--VAWKIAEG-----TCKEAG--LTVTPFPLKH-RVPCCGYRLHL 172 Query: 178 -----------------------------FGNVA---------------YCTDVNAFPAE 193 G A Y TD P Sbjct: 173 PRAGRFDAARAKAAGIPLEYWRVLQAGQSIGGFAPGDVLGPPRRGLTVVYATDTRPCP-A 231 Query: 194 SLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-- 244 LE + D L +D+ L H + E+ + LTH + Sbjct: 232 VLEAARGADLLCMDSTYADDTDLPKAKLYGHATCRETGALAAEAKVRRLWLTHYSAAVTD 291 Query: 245 ---DYDMVLKSTPSRVVPAFDGMQFSSP 269 + P +DG+Q Sbjct: 292 PAPGLAVARTQYPE-AAAGYDGLQLELE 318 >gi|238025537|ref|YP_002909769.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia glumae BGR1] gi|237880202|gb|ACR32534.1| Pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia glumae BGR1] Length = 303 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 99/316 (31%), Gaps = 65/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C RT+SSL IS V+ + Sbjct: 1 MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + L I A++ DH G+ L++ P+DV+ Sbjct: 57 SPDIRAQLQQFAPLQPGRALRDTGIAAIVLMDSQIDHTTGL-----LSLREGCPLDVWCT 111 Query: 112 PDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L F + PI P + + A P H Sbjct: 112 DMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFVLQSAAPPYSPH 171 Query: 169 GRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIID----------- 207 G G V Y + A ++ D L++D Sbjct: 172 RHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRR 231 Query: 208 ---ALKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR--- 256 + G H L++S L+ +E + ILTH++ ++ + +P R Sbjct: 232 RGVGTRTGREMGH--LAQSGPGGMLEVLERFPAQRKILTHINNTNP--ILDERSPERAEL 287 Query: 257 ----VVPAFDGMQFSS 268 V AFDGM+ Sbjct: 288 ARRQVEVAFDGMRIEL 303 >gi|148252379|ref|YP_001236964.1| hypothetical protein BBta_0796 [Bradyrhizobium sp. BTAi1] gi|146404552|gb|ABQ33058.1| hypothetical protein BBta_0796 [Bradyrhizobium sp. BTAi1] Length = 244 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 96/273 (35%), Gaps = 42/273 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +GCG + G R+ + ++ G +T +++D G Sbjct: 1 MQLRFVGCGDAFG----------------SGGRSNTCFHLT-----GISTNLLIDCGASS 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 + R + + +L TH H DH G+ L F K+ +P+ + L + Sbjct: 40 PPALKRLGIACNDVSLILITHFHGDHFAGLPFLLLDAQFSKRTQPLVIAGPAGIATRLTQ 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 F+ + P VIE + G I P HG LG+R Sbjct: 100 VMEALFEH--SSSTPRTFELAVIELAPE---CTTRFGDIGVTPFAVVHGGSGGPFLGYRI 154 Query: 179 GN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPK 233 +AY D + ++ D I +A + +H SL+ ++ I PK Sbjct: 155 AAEGRVIAYTADTEW-TDSLIPLGRDADLFIAEAYTFDRPVKNHLSLAALAAHLDAIRPK 213 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 +LTH+ D+ L++ P A DGM Sbjct: 214 RLVLTHLGPDM--LSRLETLPH--AAAHDGMTI 242 >gi|330821993|ref|YP_004350855.1| Pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia gladioli BSR3] gi|327373988|gb|AEA65343.1| Pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia gladioli BSR3] Length = 303 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 99/315 (31%), Gaps = 67/315 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-----PTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 H ILG A G P+ + C K RT+SS+ IS V+ + Sbjct: 1 MHIQILGSAAGGGFPQWNCNCANCAGFRDGSVEAK-ARTQSSIAISDDGVSW----VLCN 55 Query: 60 TGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q+ + I A++ DH G+ L++ P+DV+ Sbjct: 56 ASPDIRAQLQQFAPFQPGRALRDTGIAAIVLMDSQIDHTTGL-----LSLREGCPLDVWC 110 Query: 111 APDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L F + P+ P + + A P Sbjct: 111 TDMVHEDLSTGFPLFTMLSHWNGGLRWNPVEPDRAFTIAACPNLRFTPFVLQSAAPPYSP 170 Query: 168 HGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID---------- 207 H G G + Y + A ++ D L++D Sbjct: 171 HRHDPHPGDNIGLVIEDARSGGKLFYAPGLGAVDEALAARMAQADCLLVDGTLWHDDEMQ 230 Query: 208 ----ALKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-- 256 + G H L++S L+ +E + ILTH++ ++ + +P R Sbjct: 231 RRGVGTRTGRQMGH--LAQSGPGGMLEVLERFPAQRKILTHINNTNP--ILDERSPERAE 286 Query: 257 -----VVPAFDGMQF 266 V AFDGM+ Sbjct: 287 LARRQVEVAFDGMRI 301 >gi|16759988|ref|NP_455605.1| hypothetical protein STY1143 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142241|ref|NP_805583.1| hypothetical protein t1810 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|168821776|ref|ZP_02833776.1| putative metallo-beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|213052398|ref|ZP_03345276.1| hypothetical protein Salmoneentericaenterica_05384 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213580294|ref|ZP_03362120.1| hypothetical protein SentesTyph_03385 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213649783|ref|ZP_03379836.1| hypothetical protein SentesTy_22379 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|25513138|pir||AH0631 hypothetical protein STY1143 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502282|emb|CAD08235.1| hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137871|gb|AAO69432.1| hypothetical protein t1810 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|205341688|gb|EDZ28452.1| putative metallo-beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 312 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|325969724|ref|YP_004245916.1| beta-lactamase [Vulcanisaeta moutnovskia 768-28] gi|323708927|gb|ADY02414.1| beta-lactamase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 249 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 31/216 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLR---EQVLSIDAVLYTHPHADHIHGIDGL 95 SL + +N+ +++DTG Y + LR V +D +L TH H DHI G+ L Sbjct: 19 NVSLLVEI-----NNSRILIDTGEGTY-RALRTCGFDVNKVDLILITHRHGDHIMGLSTL 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + VY D + F AL Y V+ I+ + P + Sbjct: 73 ALFARSMGITLRVYGPRDV------DLQGLFNALGIPQYLSAVDFHSIDPSPEPSTVVI- 125 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKL-QNLDFLIID-- 207 G + H + +L +R + +AY D P++S+ L ++ LI + Sbjct: 126 GRDYRVTAVSADH-TVPALAYRIEDSDGSCIAYSGDTR--PSKSIVNLSRDCTLLIHEVS 182 Query: 208 ---ALKNGLH-SSHFSLSESLKKIELINPKNAILTH 239 + H H + SE+++ K + H Sbjct: 183 GNPGTEEASHLHGHSTTSEAIQVAREAGVKYLMPVH 218 >gi|205352262|ref|YP_002226063.1| hypothetical protein SG0998 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272043|emb|CAR36887.1| hypothetical protein SG0998 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 305 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAIHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|166031751|ref|ZP_02234580.1| hypothetical protein DORFOR_01452 [Dorea formicigenerans ATCC 27755] gi|166028204|gb|EDR46961.1| hypothetical protein DORFOR_01452 [Dorea formicigenerans ATCC 27755] Length = 265 Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 91/232 (39%), Gaps = 47/232 (20%) Query: 51 GSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G +T ++VDTG ++ L + ++ +L TH H DH+ G+ +K Sbjct: 19 GEHTHLLVDTGISKKRVEEGLKALDIKGEELNGILITHEHIDHVQGLG-----VFSRKYE 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA ++ + + I +++ G ++ P Sbjct: 74 VPIYATKGTIEGIKK-------------ISSIGKMPEGLFHEIQTDETFTLGELKVEPFK 120 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H G+R G+ VA TD+ + ++E L+NLD ++++A L+ G + Sbjct: 121 ISHDANEPSGYRIGDGKKSVAVATDLGKYDDYTVEHLKNLDAIVLEANHDLKMLEVGPYP 180 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + I N K+ +L H+ + +Y+ + T Sbjct: 181 YPLKRRVAGDKGHLSNELSGRLLCDILHDNLKHVVLGHLSKENNYEELAYET 232 >gi|325958402|ref|YP_004289868.1| Ribonuclease Z [Methanobacterium sp. AL-21] gi|325329834|gb|ADZ08896.1| Ribonuclease Z [Methanobacterium sp. AL-21] Length = 302 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 96/290 (33%), Gaps = 77/290 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG +++ P N R S+L + E ++ D G Sbjct: 1 MEIVFLGTSSAI----------------PTNNRNHSALALKAFGEI-----ILFDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHL-- 118 Q+ R ++ ID + TH H DHI GI GL F ++ +++Y P + L Sbjct: 40 QRQMTRARLSPMKIDRIFVTHFHGDHILGIPGLIQSMAFRGRRDTLEIYGPPGIQELLNS 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDV-----------------------PICMKSA 155 + Y F + I + V+E +D P +K Sbjct: 100 MKKLGY-FALSFNIAVHEIKDGTVLEEDDFKISAQLMKHSVENYAYCIEEKRDPKFIKEK 158 Query: 156 GGVIEAIPILQQHGRISS-LGFRFGN-----------------VAYCTDVNAFPAESLEK 197 + P +G++ S L + GN + Y D A E + Sbjct: 159 ALKLGIKPGP-AYGKLQSGLPVKIGNKIIKPEEVLGEKRRGRKLVYSGDTLAC-EEMVGF 216 Query: 198 LQNLDFLIIDALKNGLHS------SHFSLSESLKKIELINPKNAILTHMH 241 ++ D LI ++ N H H + + + K+ +LTH+ Sbjct: 217 SKDADVLIHESTFNNSHKEKAFETGHSTAEMAADIAKKAGVKSLVLTHIS 266 >gi|62179629|ref|YP_216046.1| hypothetical protein SC1059 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168233486|ref|ZP_02658544.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237168|ref|ZP_02662226.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168243902|ref|ZP_02668834.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264126|ref|ZP_02686099.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467553|ref|ZP_02701390.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445325|ref|YP_002040364.1| hypothetical protein SNSL254_A1204 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449312|ref|YP_002045109.1| hypothetical protein SeHA_C1219 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471424|ref|ZP_03077408.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736694|ref|YP_002114107.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248773|ref|YP_002145978.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|200390474|ref|ZP_03217085.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|224584385|ref|YP_002638183.1| hypothetical protein SPC_2641 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911069|ref|ZP_04654906.1| hypothetical protein SentesTe_08027 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|62127262|gb|AAX64965.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194403988|gb|ACF64210.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407616|gb|ACF67835.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457788|gb|EDX46627.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712196|gb|ACF91417.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630080|gb|EDX48732.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197212476|gb|ACH49873.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197289814|gb|EDY29175.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199602919|gb|EDZ01465.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205332418|gb|EDZ19182.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337103|gb|EDZ23867.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347378|gb|EDZ34009.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|224468912|gb|ACN46742.1| hypothetical protein SPC_2641 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322714097|gb|EFZ05668.1| Putative periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 312 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|56295604|emb|CAH04845.1| metal dependent hydrolase of beta-lactamase superfamily III (ElaC) [uncultured archaeon] Length = 312 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 93/335 (27%), Gaps = 105/335 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S+ P R S+ I R ER ++ D G Sbjct: 10 LKIIFLGTGGSIPTP----------------NRGMPSIMIQREGER-----LLFDCGEGT 48 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDC--MKHL 118 Q+++ + +D + TH HADH GI GL Q R P+++Y L Sbjct: 49 QRQMMKARSGFMDIGHMFLTHFHADHTLGIPGLLQTMSLQGRTEPLNIYGPDYVEEYCSL 108 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 Y + V P + DV +K G +EA H + SLG+ Sbjct: 109 LSRLGYL-------SLSYQVIPRRLSPGDV---IKFKGYSVEA--FRTFHS-VPSLGYAL 155 Query: 177 -------RFGN--------------------------------------------VAYCT 185 RF + Y Sbjct: 156 KEDQKPGRFNKARALELGVPEGPLFSKLHRGESVVVNGRTITSEEVVGEPRRGRTIVYTG 215 Query: 186 DVNAFPAESLEKLQNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D A A L LQ D I D + H + + K +LTH Sbjct: 216 DTVA-SASFLPHLQGADVWISESTFGDDMAGKAEETLHSTAGGVAELAARAGVKQLVLTH 274 Query: 240 MHVDLDYDMV-----LKSTPSRVVPAFDGMQFSSP 269 + D + V+ A D + P Sbjct: 275 VSSRYSTDTTPLLEDARKKFDNVLVAEDFTEIELP 309 >gi|147920763|ref|YP_685431.1| ribonuclease Z [uncultured methanogenic archaeon RC-I] gi|110620827|emb|CAJ36105.1| RNase Z [uncultured methanogenic archaeon RC-I] Length = 304 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 93/335 (27%), Gaps = 105/335 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S+ P R S+ I R ER ++ D G Sbjct: 2 LKIIFLGTGGSIPTP----------------NRGMPSIMIQREGER-----LLFDCGEGT 40 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDC--MKHL 118 Q+++ + +D + TH HADH GI GL Q R P+++Y L Sbjct: 41 QRQMMKARSGFMDIGHMFLTHFHADHTLGIPGLLQTMSLQGRTEPLNIYGPDYVEEYCSL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 Y + V P + DV +K G +EA H + SLG+ Sbjct: 101 LSRLGYL-------SLSYQVIPRRLSPGDV---IKFKGYSVEA--FRTFHS-VPSLGYAL 147 Query: 177 -------RFGN--------------------------------------------VAYCT 185 RF + Y Sbjct: 148 KEDQKPGRFNKARALELGVPEGPLFSKLHRGESVVVNGRTITSEEVVGEPRRGRTIVYTG 207 Query: 186 DVNAFPAESLEKLQNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D A A L LQ D I D + H + + K +LTH Sbjct: 208 DTVA-SASFLPHLQGADVWISESTFGDDMAGKAEETLHSTAGGVAELAARAGVKQLVLTH 266 Query: 240 MHVDLDYDMV-----LKSTPSRVVPAFDGMQFSSP 269 + D + V+ A D + P Sbjct: 267 VSSRYSTDTTPLLEDARKKFDNVLVAEDFTEIELP 301 >gi|298674167|ref|YP_003725917.1| ribonuclease Z [Methanohalobium evestigatum Z-7303] gi|298287155|gb|ADI73121.1| ribonuclease Z [Methanohalobium evestigatum Z-7303] Length = 304 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 97/329 (29%), Gaps = 93/329 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG SL P R S+ I + SE ++ D G Sbjct: 2 LKITFLGTAGSLPTP----------------YRNPPSILIKKDSEL-----LMFDCGEGA 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP--DCMKHL 118 Q++R ++S+ ++ TH HADH+ GI GL Q R P+ +Y D + Sbjct: 41 QQQMMRARTGMMSLSSIFITHFHADHVLGIPGLLQTMSFQGRTEPLYIYGPEKIDVFIQI 100 Query: 119 FESFRYC-----------------------FKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + YC KAL + ++EN + Sbjct: 101 LTALGYCQLGYEIKTVELKPGDIIEKNGYHIKALKTEHGVKSIGYSLVENKRPGKFDRDK 160 Query: 156 GGVIEAIPILQ----------------QHGRISSLGFRFGN-VAYCTD---VNAFPAESL 195 + P H R G V Y D SL Sbjct: 161 AVSLGVPPGPLFSKLQKGNPVEVDGRTVHPEEVVGEPRPGRTVVYSGDTRPCEDVFNASL 220 Query: 196 EKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 E D LI D + S H + SE+ + + +LTH+ Sbjct: 221 EA----DVLIHDGSLDDSQSEWAAESMHSTASEAAELAKKAGVIKLVLTHISS----RYT 272 Query: 250 LKSTP---------SRVVPAFDGMQFSSP 269 +P VV A D M+ + P Sbjct: 273 EDESPLLNDANEIFENVVIADDLMEINIP 301 >gi|218291250|ref|ZP_03495234.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218238852|gb|EED06063.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 268 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 52/223 (23%) Query: 50 RGSNTTVIVDTGP-------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +T +++D G Q RE + + AVL TH H DH+ G+ L + Sbjct: 18 ESGDTRILLDAGLSGRQLETRLRAQCERE-LRDLTAVLITHEHDDHVKGL-----VQLAK 71 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K +Y L R P + + G + Sbjct: 72 KSQAPLYMTEGTYAGL---------PAKARLDEPDRVVHIRAGEPFEV------GGVRIT 116 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNG 212 P H + FRF G++A TD+ E L+ D + + L+ G Sbjct: 117 PFAVSHDAEEPVAFRFDTVEGSLAVVTDLGYVSDRQRELLRGCDVYVFETNHDTEMLRAG 176 Query: 213 LHSSHF------------SLSESLKKIELIN--PKNAILTHMH 241 + H ++ + I++++ P + L H+ Sbjct: 177 PYPWHLKRRILGDKGHLSNVDAAYALIDILSDEPAHVYLAHLS 219 >gi|188581024|ref|YP_001924469.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium populi BJ001] gi|226704955|sp|B1ZIB4|PQQB_METPB RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|179344522|gb|ACB79934.1| coenzyme PQQ biosynthesis protein B [Methylobacterium populi BJ001] Length = 299 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 114/311 (36%), Gaps = 63/311 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A GVP+ C +P+ + RT+SS+ +S ER ++++ Sbjct: 1 MHVVILGSAAGGGVPQWNCRCSICSLAWAGDPRVKARTQSSIAVSPDGERW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA Sbjct: 57 SPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVI 159 P + + ++ F + R P + + VP+ ++ A I Sbjct: 112 PGILASVSDNRVFDVMAADVVKRQTIALDETFEPVPGLSVTLFSVPGKVPLWLEDASMEI 171 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKN 211 A G + G + +AY + ++ +D L+ D ++ Sbjct: 172 GAE-TETTVGTMIEAGGK--RLAYIPGCARVTEDLKARVAGVDALLFDGTVLEDDDMIRA 228 Query: 212 GLHSS------HFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS------- 255 G+ + H + + S+ + +L H++ ++++ +P Sbjct: 229 GVGTKTGWRMGHIQINGETGSIASFADVALGRRVLIHINNTNP--ILIEDSPERAGVEAR 286 Query: 256 RVVPAFDGMQF 266 A DG+ Sbjct: 287 GWTVAHDGLTL 297 >gi|323227463|gb|EGA11626.1| hypothetical protein SEEM0055_10629 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 305 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDISQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|313127680|ref|YP_004037950.1| rnase z [Halogeometricum borinquense DSM 11551] gi|312294045|gb|ADQ68505.1| RNAse Z [Halogeometricum borinquense DSM 11551] Length = 311 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 98/325 (30%), Gaps = 100/325 (30%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G ++ P R S+ ++R ER ++ D G Sbjct: 2 SMRVTFLGTGGAV----------------PTTERGPSAFLVNRDGER-----LLFDCGEG 40 Query: 64 FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q++R ++ + TH H DH+ GI GL F ++ PI ++A P +HL Sbjct: 41 TQRQMMRFGTGFTVSHLFVTHLHGDHVLGIPGLIQTWDFNDREEPIAIHAPPGSKRHLQ- 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 ++ Y P + E P + +G E H + S+GF Sbjct: 100 ------SLVNAGGYRPSFPVNIHEVK--PGNVALSGDSYEVRTFETDHRNVRSMGFALVE 151 Query: 177 -----RFG---------------------------------------------NVAYCTD 186 RF + Y D Sbjct: 152 DDRPGRFNREKAEALGVPVGPDFGRLHEGESVELEDGTVIHPEQVVGDPRPGRRLVYTGD 211 Query: 187 VNAFPAESLEKLQNLDFLIIDAL-----KNGLHSS-HFSLSESLKKIELINPKNAILTHM 240 +++ + D LI DA H + H + E+ + + LTH+ Sbjct: 212 TRPV-DATVDVVDEPDLLIHDATFAEDRAERAHGTGHSTGREAAEIANRAGARRLALTHI 270 Query: 241 H--VDLDYDMVLKSTPSRVVPAFDG 263 D + + AFDG Sbjct: 271 SSRYAGDASPIEREA----QAAFDG 291 >gi|213612631|ref|ZP_03370457.1| hypothetical protein SentesTyp_09049 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 294 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 41 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 100 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 101 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 159 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 160 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 218 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 219 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 278 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 279 PGPVIVGHDNMTISVP 294 >gi|170737518|ref|YP_001778778.1| coenzyme PQQ biosynthesis protein B [Burkholderia cenocepacia MC0-3] gi|169819706|gb|ACA94288.1| coenzyme PQQ biosynthesis protein B [Burkholderia cenocepacia MC0-3] Length = 307 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 104/322 (32%), Gaps = 73/322 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCANCRRARSGSGHVLPRTQSSIAVSDDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AV+ DH+ G+ LR ++ P+ +YA+ Sbjct: 57 SPDILSQLRAAPDLQPARAIRDSGIAAVVLCDAQIDHVTGLLMLR----ERSTPLPLYAS 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L L V I + + G AI + + Sbjct: 113 APVLDDLSTGLP-LVPLLGHYCG---VAAHTIVPGEPFAVPAARGIRFTAIAVDSKPPPY 168 Query: 172 ----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------- 208 ++ +VA Y + + + + D +++D Sbjct: 169 SPRRASAAPGDNIALSIEDVASGRRAFYAPGLASVTDDVRAAMDGADLVLVDGTFWTGTE 228 Query: 209 -LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDLDY 246 + GL H L++ + ++ + + +LTH++ +++ Sbjct: 229 MIDLGLSRKHAADMGHLAQCAEPGQPGMIDWLDSLPARTRKVLTHINNTNPILDPHSVEH 288 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + A DGMQF Sbjct: 289 AHLRA---HGIDVAHDGMQFQV 307 >gi|158523245|ref|YP_001531115.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158512071|gb|ABW69038.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 263 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 95/287 (33%), Gaps = 49/287 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 TILG G VP +T R+ ++ + + V+ D G Sbjct: 7 TGKIRVTILGSGT--CVPSLT--------------RSACAVLVEIAGAK-----VVFDCG 45 Query: 62 PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHL 118 P ++L + + + ++H H DH + + K P P M Sbjct: 46 PGTMRRLLETGTGIHDVSHLFFSHFHPDHTG---EMATFLFAGKYSPGPRRTRPMVMAGG 102 Query: 119 --FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F F FK + + +VIE D + H R S+ F Sbjct: 103 TGFARFYEAFKGVYGEWIEWADDLLVIEEFDTTGPDTRSYDGFFLTTRPVPH-RPESIAF 161 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNG-LHSSHFSLSESLKKIELI 230 R +V Y D + +N D +I + AL +G H + S + + + Sbjct: 162 RLEAGGVSVVYSGDT-DVSDSLITLAKNADLMICESALPDGWKVDGHLTPSLAGEMAQKA 220 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG--------MQFSSP 269 + +LTH++ D ++ S A+DG M+ P Sbjct: 221 GVRRLVLTHLYPMCDMVDIVSQCRS----AYDGDVQVAEDLMRIEVP 263 >gi|293608093|ref|ZP_06690396.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|130797|sp|P07779|PQQB_ACICA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Coenzyme PQQ synthesis protein V; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|38742|emb|CAA29753.1| V protein [Acinetobacter calcoaceticus] gi|292828666|gb|EFF87028.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 303 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 94/314 (29%), Gaps = 69/314 (21%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C T RT+SS+ +S V+++ PD Sbjct: 5 VLGSAAGGGFPQWNCNCPNCHGVRTGTIQAKARTQSSIAVSENGTDW----VLLNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I +V+ DH G+ L++ P++V+ Sbjct: 61 RQQLFEFKAAQPARKLRDTGIISVILMDSQLDHTTGL-----LTLREGCPMNVWCTEMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI------PILQQHG 169 + L F F L + + I + P H Sbjct: 116 QDLTNGFP-VFNMLKH--WNGGLQYHEINPKQAFKIDGFENLEFLPLIIKSAAPPYSPHR 172 Query: 170 RISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID------------ 207 G + Y + + ++ +Q+ D ++ID Sbjct: 173 NNPHDGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQSSDCVMIDGTLWTDDEMQQT 232 Query: 208 --ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKSTP 254 K G H +S SL + ++ +L H++ + + Sbjct: 233 GVGTKTGREMGHLYISGEGGSLSYLNKLSTPKKVLIHINNTNPILNENSSQFAELKA--- 289 Query: 255 SRVVPAFDGMQFSS 268 + V A+DGMQ Sbjct: 290 NGVEVAYDGMQIEL 303 >gi|166712954|ref|ZP_02244161.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 299 Score = 82.9 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 98/315 (31%), Gaps = 67/315 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER + +++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASLRAWQRADATQRRTQASIAVSADGERWA----LINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI-- 106 PDF Q+L ++ + I+AVL T DHI G+ +R + L R + Sbjct: 57 SPDFRQQILATPALWPQQGLRHSPIEAVLLTSGEVDHIAGLLSMRESQPFALHASRRVLD 116 Query: 107 -----DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 ++ + A + + P + +GG + Sbjct: 117 LLAQNPIF--DAVNPQYVSRQPFTLNAPLTVSGLQ-LTPFSVPGKVPLFMESRSGGDLAG 173 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 + +LG + V Y A +L + + D Sbjct: 174 -------SQEETLGLTIDDGQHRVHYIPGCAAMTDALRARLHGAELVFFDGTLWRDDEMV 226 Query: 210 ------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 227 QLGISQKTGKRMGHMSIDGPEGTIAAFAPLNVARKIFIHLNTTNP--VLNTQSPEFASAR 284 Query: 256 --RVVPAFDGMQFSS 268 A DG++ + Sbjct: 285 ASGWEVAHDGLEIAL 299 >gi|207856452|ref|YP_002243103.1| hypothetical protein SEN0973 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708255|emb|CAR32555.1| hypothetical protein SEN0973 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 305 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|284929593|ref|YP_003422115.1| RNAse Z [cyanobacterium UCYN-A] gi|284810037|gb|ADB95734.1| RNAse Z [cyanobacterium UCYN-A] Length = 322 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 102/327 (31%), Gaps = 82/327 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +RG + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSVALRLQQRGEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q+ + V I + TH H DHI+G+ GL ++PI++Y + +L Sbjct: 42 QHQLSKSDVKASQITKIFITHMHGDHIYGLMGLIASCNLAGNRQPIEIYGPQELDNYLRS 101 Query: 121 SFRY-----------------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-- 161 +Y F ++ + I + + K G + Sbjct: 102 CAQYSHFKLPYGIRINEISSGTFYEDNEFIISAKLLRHRIPAHGYCVIEKDRPGRFDVKK 161 Query: 162 -----IPILQQHG------RISSLGFRF-------------GNVAYCTDVNAFPAESLEK 197 IP +G I RF + YCTD F E++E Sbjct: 162 AVSLGIPPGPIYGELKQGKTIQLDDGRFIRGQDLCGKVEKGRKLIYCTDTI-FCEEAVEL 220 Query: 198 LQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH------VDLD 245 +N D LI +A + H + + + + K ILTH +L Sbjct: 221 ARNADILIHEATFAHQDSQLAFERLHSTSTMAAQVALGAKAKKLILTHFSPRYAPGNNLQ 280 Query: 246 YDMVLKSTP---SRVVPAFDGMQFSSP 269 +L + A D M +S P Sbjct: 281 LSDLLNEAKAIFPNTILAHDFMTYSIP 307 >gi|213428519|ref|ZP_03361269.1| hypothetical protein SentesTyphi_25097 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 305 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|169633580|ref|YP_001707316.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii SDF] gi|226704949|sp|B0VQD4|PQQB_ACIBS RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|169152372|emb|CAP01313.1| coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) [Acinetobacter baumannii] Length = 303 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 101/312 (32%), Gaps = 57/312 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGCPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ P++V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPMNVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + V+P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQVDPKQAFIIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSR 256 K G H +S SL + ++ +L H++ D + + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKANG 291 Query: 257 VVPAFDGMQFSS 268 V AFDGMQ Sbjct: 292 VEVAFDGMQIEL 303 >gi|320085326|emb|CBY95109.1| Ribonuclease Z RNase Z; tRNase Z; tRNA 3 endonuclease [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 300 Score = 82.5 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 47 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 106 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 107 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 165 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 166 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 224 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 225 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 284 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 285 PGPVIVGHDNMTISVP 300 >gi|328720986|ref|XP_001946795.2| PREDICTED: ribonuclease Z, mitochondrial-like [Acyrthosiphon pisum] Length = 804 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 106/295 (35%), Gaps = 60/295 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G+ C P+ +N +S + E N V++D+G Y Sbjct: 492 KITFLGTGS-------------CIPSKTRN----TSGILMYTGE---NECVLLDSGEGTY 531 Query: 66 MQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPI-----DVYAA 111 Q++R + + A+ +H HADH G+ G+ K K + VY Sbjct: 532 GQLVRHFGLTGAETVLSDLKAIYVSHLHADHHIGLIGILSVRQKMKANKLFKLNQPVYLL 591 Query: 112 PDC-----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + F + + + + + ++ IE L Sbjct: 592 APVQIMTWLNFYDRRFAELSEEFQIVSNLDLDFESSTKLRIKDLLKQTNMSDIETT--LV 649 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS---- 216 +H ++ G F V Y D P +SL KL +N + LI +A S Sbjct: 650 RHCP-NAFGVSFTHINGWKVTYSGDT--MPCDSLVKLGKNSNLLIHEATMEDQLVSEARR 706 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQF 266 H ++S+++ + +N K ILTH + Y M PS V AFD M+ Sbjct: 707 KMHSTMSQAINIGKKMNAKFTILTHFSQRYAKIPY-MPNNDLPSNVGIAFDNMEI 760 >gi|296274308|ref|YP_003656939.1| coenzyme PQQ biosynthesis protein B [Arcobacter nitrofigilis DSM 7299] gi|296098482|gb|ADG94432.1| coenzyme PQQ biosynthesis protein B [Arcobacter nitrofigilis DSM 7299] Length = 304 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 107/315 (33%), Gaps = 62/315 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G+P+ + C RRT+SS+ IS + V+ +T Sbjct: 1 MKIEVLGSSAGGGLPQFNCNCDNCKAYREGKKTVKRRTQSSITISEDGKNW----VLFNT 56 Query: 61 GPDFYMQVLREQV--------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ I A+++ DH G+ L++ P +VY Sbjct: 57 SPDILEQIHNSPFLQPQERRETKIKAIIFIDAQIDHTTGL-----LMLREGCPHEVYCTK 111 Query: 113 DCMKHLFESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + + L SF FK L I N E +P A +I P Sbjct: 112 EVNEELNTSFP-LFKMLTHWDGGGIKYNEITPNNKSFEIPVMPSYEFFALPLISNAPPYS 170 Query: 167 QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDA-------- 208 ++ G G V Y + + ++++ D L++D Sbjct: 171 KYRDKPRAGDNIGIVVRNKITGKKLFYLPGLGVVEKHIVNEMRDADILLVDGTVWTNDEM 230 Query: 209 LKNGLHSS------HFSLSESLKKIELI----NPKNAILTHMHV-----DLDYDMVLKST 253 +KNG + H LS I+++ P+ IL H++ D + D + Sbjct: 231 IKNGFSTKLGTDMGHIPLSGEEGLIKILDTLEKPRK-ILIHINNTNPILDEENDEYKELI 289 Query: 254 PSRVVPAFDGMQFSS 268 + ++DGM Sbjct: 290 SHGIEVSYDGMSIEI 304 >gi|296268926|ref|YP_003651558.1| beta-lactamase domain-containing protein [Thermobispora bispora DSM 43833] gi|296091713|gb|ADG87665.1| beta-lactamase domain protein [Thermobispora bispora DSM 43833] Length = 251 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 34/234 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G + R + +DAVL TH HADH +D + ++ P Sbjct: 25 EAEGFRLMMDFGNGALGALQRFLGLYDLDAVLLTHLHADHC--LDLCAYHVVRTYTPDGP 82 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + VY D + L ++ + + + ++ I + G E Sbjct: 83 LPGKVPVYGPRDTAQRLNAAYGMPHEPVLENSFEFIPVTTGVRR----------IGPFEV 132 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGL 213 H + + G+R +V Y D AE +E ++ D L+ +A Sbjct: 133 TAAPMNH-PVETYGYRITYGGRSVVYSGDTGE-SAELVELARDADLLLCEASFLDAPGQP 190 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG-MQF 266 H + ++ + +LTH+ + + + FDG M+ Sbjct: 191 PGLHLNGRQAAEHAARAGVGTLVLTHL---VPWYDPARILEDASRGGFDGRMEL 241 >gi|16764467|ref|NP_460082.1| periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161614692|ref|YP_001588657.1| hypothetical protein SPAB_02443 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993676|ref|ZP_02574770.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197264052|ref|ZP_03164126.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16419625|gb|AAL20041.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161364056|gb|ABX67824.1| hypothetical protein SPAB_02443 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197242307|gb|EDY24927.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205328319|gb|EDZ15083.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267992866|gb|ACY87751.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312912097|dbj|BAJ36071.1| hypothetical protein STMDT12_C11280 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223724|gb|EFX48787.1| Ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129376|gb|ADX16806.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 312 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIARESHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|319789599|ref|YP_004151232.1| metallo-beta-lactamase family protein [Thermovibrio ammonificans HB-1] gi|317114101|gb|ADU96591.1| metallo-beta-lactamase family protein [Thermovibrio ammonificans HB-1] Length = 270 Score = 82.5 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 87/238 (36%), Gaps = 33/238 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQKRP--ID 107 + VD GP ++ R+ + DAVL TH H DH ++ + + Sbjct: 39 GGYNLHVDPGPGAFVHAHRKGIEPFWTDAVLLTHRHLDHCADVNHILEAMTLGGKRKKGK 98 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + D + Y + +++ I+IE + ++ P+ Sbjct: 99 LLCPSDAVNQDPVVLEYTRQNIEE--------TILIEEKKELMLFENLKLTF---PVRHV 147 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPA--ESLEKLQNLDFLIIDALKNGLHSS--HFS 219 HG + + G F + Y TD FP E+ + D LII+ + H S Sbjct: 148 HG-VETYGVIFNWNGKHFGYLTDTKFFPELLEAYSPAK--DLLIINTTLYSPNPKIDHLS 204 Query: 220 LSESLKKIELINPKNAILTHMHVDL----DYDMV---LKSTPSRVVPAFDGMQFSSPI 270 ++ + I + P A+LTH + +++ K T + + A+D M I Sbjct: 205 AKDAKEIIAFVKPTLAVLTHFGKTMLSAKPWEVAASIEKETGVKTLAAYDNMIIDLNI 262 >gi|260555011|ref|ZP_05827232.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii ATCC 19606] gi|260411553|gb|EEX04850.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii ATCC 19606] Length = 303 Score = 82.1 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 101/315 (32%), Gaps = 63/315 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ P++V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPMNVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + ++P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQ 231 Query: 210 -----KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKST 253 K G H +S SL + ++ +L H++ + + Sbjct: 232 TGVGKKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSTQFAELKA-- 289 Query: 254 PSRVVPAFDGMQFSS 268 + V AFDGMQ Sbjct: 290 -NGVEVAFDGMQIEL 303 >gi|158313625|ref|YP_001506133.1| cobalbumin biosynthesis protein [Frankia sp. EAN1pec] gi|158109030|gb|ABW11227.1| cobalbumin biosynthesis protein [Frankia sp. EAN1pec] Length = 471 Score = 82.1 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 43/272 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G++ G P + +C R ++++ + + +++D GPD Sbjct: 1 MRLTLLGTGSADGWPNPWCECASCAWARAHEPRGQTAVLV--------DDRLLIDFGPDV 52 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIH-GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R V + VL H H DH+ R + +P+DV A P ++ Sbjct: 53 PRAASRFGVSLAGLRHVLVGHAHPDHLGPEALMWRSWSTVADQPLDVVAPPAALEVCRAF 112 Query: 122 FRYCFKALDDRTYPPIVNPIVI----------ENNDVPICMKSAGGVIEAIPILQQHGR- 170 R P + P V E + + G P+ +HG Sbjct: 113 LRRWEGTEPGEGSPLRLLPAVAGDHLELGGPGEPTEPGEPHRPGGPGYLVRPVAARHGDD 172 Query: 171 -------ISSLGFRFGNVAYCTDV-NAFPAESLEKLQN--LDFLII---DALKNGLHSSH 217 + Y D P +L L + D +++ + + G H Sbjct: 173 SIGPAVLYDVTAPDGARLLYGCDTAVPLPPATLAALADRAFDVVLLEENNGDRPGFGE-H 231 Query: 218 FSLSESLKKIELIN------P-KNAILTHMHV 242 L + + + + P + H+ Sbjct: 232 LDLPDFAELVAELRGLGAVVPSTRVLAVHLSH 263 >gi|258512876|ref|YP_003186310.1| beta-lactamase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479602|gb|ACV59921.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 268 Score = 82.1 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 71/223 (31%), Gaps = 52/223 (23%) Query: 50 RGSNTTVIVDTGP-------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +T +++D G Q RE + + AVL TH H DH+ G+ L + Sbjct: 18 ESGDTRILLDAGLSGRQLETRLRAQCERE-LRDLTAVLITHEHDDHVKGL-----VQLAK 71 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K +Y L R P + + G + Sbjct: 72 KCQASLYMTEGTYAGL---------PAKARLDEPDRVVHIRAGEPFEV------GGVRIT 116 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNG 212 P H + FRF G++A TD+ E L+ D + + L+ G Sbjct: 117 PFAVSHDAEEPVAFRFDTAEGSLAVVTDLGYVSDRQRELLRGCDVYVFETNHDTEMLRAG 176 Query: 213 LHSSHF------------SLSESLKKIELI--NPKNAILTHMH 241 + H ++ + I+++ P + L H+ Sbjct: 177 PYPWHLKRRILGDKGHLSNVDAAYALIDILSDQPSHVYLAHLS 219 >gi|32129862|sp|Q49149|PQQB_METEA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Coenzyme PQQ synthesis protein G; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|414591|gb|AAA17879.1| PQQ biosynthesis polypeptide [Methylobacterium extorquens AM1] Length = 299 Score = 82.1 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 110/310 (35%), Gaps = 61/310 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A GVP+ C + + R RT+SS+ +S ER ++++ Sbjct: 1 MHVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGERW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA Sbjct: 57 SPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVI 159 P + + ++ F + R P + + VP+ ++ A I Sbjct: 112 PGILASVSDNRVFDVMAADVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEI 171 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKN 211 A G + G + +AY + ++ D L+ D ++ Sbjct: 172 GAE-TETTVGTMIEAGGK--RLAYIPGCARVTEDLKARIAGADALLFDGTVLEDDDMIRA 228 Query: 212 GLHSS------HFSL---SESLKKIELINPKNAILTHMH------VDLDYDMVLKSTPSR 256 G+ + H + + S+ + I + H++ ++ Y+ Sbjct: 229 GVGTKTGWRMGHIQMNGETGSIASLADIEIGRRVFVHINNTNPVLIEDSYERASVEA-RG 287 Query: 257 VVPAFDGMQF 266 A DG+ Sbjct: 288 WTVAHDGLTL 297 >gi|206564201|ref|YP_002234964.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia cenocepacia J2315] gi|198040241|emb|CAR56224.1| coenzyme PQQ synthesis protein B [Burkholderia cenocepacia J2315] Length = 307 Score = 82.1 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 105/323 (32%), Gaps = 75/323 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCANCRRVRSGSGHVLPRTQSSIAVSDDGIDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILSQ-LRADPDLQPARAIRDSGIAAVVLCDAQIDHVTGLLMLR----ERSTPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L L V I + ++G AI + + Sbjct: 112 SAPVLDDLSTGLP-LVPLLGHYCG---VAAHTIAPGEPFAVPAASGIRFTAIAVDSKPPP 167 Query: 171 I----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++ +VA Y + + E + D +++D Sbjct: 168 YSPRRASAAPGDNIALSIEDVASGRRAFYAPGLASVTDEVRAAMDGADLVLVDGTFWTGT 227 Query: 209 --LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDLD 245 + GL H L++ + ++ + + +LTH++ ++ Sbjct: 228 EMIDLGLSHKHAADMGHLAQCAEHGQPGMIDWLDTLPARTRKVLTHINNTNPILDPHSVE 287 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + + + A DGMQF Sbjct: 288 HAHLRA---HGIDVAHDGMQFQV 307 >gi|323528296|ref|YP_004230448.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1001] gi|323385298|gb|ADX57388.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1001] Length = 306 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 109/319 (34%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCSNCDGVRRGTVRATRRTQSSIAVSENGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ ++A Sbjct: 57 SPDLLAQIAANPELQRARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLHAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI------L 165 + L F A Y + + + + G I+A+P+ Sbjct: 113 DAVWQDLTSGFP---IAPILSHYCGVEHRRIAPDGAPLAVDALPGVQIDALPLSSKAPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 H LG G Y + A LE ++ D L++D Sbjct: 170 SPHRNAPELGDNIGLLFTNRQTGKRAFYAPGLGAIEPHVLEAMRKADLLLVDGTLWTADE 229 Query: 209 -LKNGLHSSHF----SLSES-----LKKIELINPKNA--ILTHMHVDLDYDMVLKSTPS- 255 ++ GL L +S ++ ++ + + +L H++ ++++ P Sbjct: 230 MIRLGLSKKTSADMGHLQQSGPGGMIEVLDSLGTPDTRKVLIHINNTNP--ILVEDGPER 287 Query: 256 ------RVVPAFDGMQFSS 268 + A DGM F Sbjct: 288 RILGEHGIEVAHDGMTFEL 306 >gi|56413898|ref|YP_150973.1| hypothetical protein SPA1741 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56128155|gb|AAV77661.1| hypothetical protein SPA1741 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 312 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEEKPDPR-NLVKATDIGQGVIYKDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 297 PGPVIVGHDNMTISVP 312 >gi|261246322|emb|CBG24131.1| hypothetical protein STMMW_11191 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301157652|emb|CBW17144.1| hypothetical protein SL1344_1048 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 305 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIARESHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|289435320|ref|YP_003465192.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171564|emb|CBH28110.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 306 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 92/327 (28%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L Q+ ++ + TH H DHI G+ GL Q + +Y ++ Sbjct: 43 QHQILLSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPVGIQAYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S + + + I+ E + + + + HG + S G+R Sbjct: 103 SLK--------LSGTRLTYKIIFEEIEPGLIFEDE--MFTVTADELDHG-MLSYGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G V D E Sbjct: 152 KDKQGALDAARLKEDGVEPGPIFQRLKNGEVVTLPDGREIDGENYIGAPQKGKIISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 +N D LI +A G H + ++ + + K ILTH+ Sbjct: 212 TRETASEFALAENADILIHEATFEGDKGKMAAEYMHSTTIQAAELAKKAGVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D + A+D Sbjct: 272 SRYDREASKALLIEAKSVFENTEIAYD 298 >gi|295401110|ref|ZP_06811084.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112114|ref|YP_003990430.1| beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294976903|gb|EFG52507.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217215|gb|ADP75819.1| beta-lactamase domain protein [Geobacillus sp. Y4.1MC1] Length = 244 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 37/237 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V +DAV+ +H H DH+ I L+ L +K Sbjct: 25 EHEGFRMLVDCGSGVLAKLQNYVSVEKLDAVVVSHYHHDHVADIGPLQYARLIKKNLGAP 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY P D + + + + E G Sbjct: 85 LPALPVYGHPF----------------DQGEFARLAHEGITEAIAYDPEQPLQVGPFHIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H ++ R V Y D + P + ++ D LI + +N Sbjct: 129 FMKTVH-PVTCYAMRITAGDATVVYTADSSYLPEFA-PFAKDADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 + H + E+ N LTH+ ++ ++ + ++ A G+ + Sbjct: 187 AGHMTSEEAATIARDANAGELWLTHLPHFGEHMQLVSEAGAVFSGKIQLAKTGLVWE 243 >gi|307152999|ref|YP_003888383.1| ribonuclease Z [Cyanothece sp. PCC 7822] gi|306983227|gb|ADN15108.1| ribonuclease Z [Cyanothece sp. PCC 7822] Length = 332 Score = 81.7 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 104/344 (30%), Gaps = 106/344 (30%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M T LG S GVP R S R+ +RG + D Sbjct: 11 MSTVVEITFLGT--SSGVPT---------------RSRNVSSVALRLPQRGEV--WLFDC 51 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMK 116 G Q+LR ++ + + TH H DHI G+ GL +P+D+Y Sbjct: 52 GEGTQHQLLRSEIKTSQLRRIFITHLHGDHIFGLMGLLASCGLAGTAQPVDLYGPTGLKD 111 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 ++ +Y + +R V P V+ ++ L +H RI + G+ Sbjct: 112 YIQACSKYSYTHFGNRVQVHTVQPGVVYEDE----------EYTVSCGLLKH-RIPAYGY 160 Query: 177 RF------GNV------------------------------------------------A 182 R G Sbjct: 161 RIAEKDRPGRFNVEKAKALGIPPGRIYGQLKNGETVTLADGRIIRGQDLCGPTESGRKLV 220 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAI 236 YCTD F ++E Q D LI +A + H + + + + K I Sbjct: 221 YCTDTV-FCESAVEIAQEADVLIHEATFAHQDAQLAFERLHSTSTMAAQVALAAGVKLLI 279 Query: 237 LTHMH------VDLDYDMVLKSTP---SRVVPAFDGMQFSSPIP 271 +TH +LD + +L+ A+D FS IP Sbjct: 280 MTHFSPRYAPGNELDVNNLLEEARAIFPNTKLAYD--FFSYEIP 321 >gi|171910011|ref|ZP_02925481.1| hypothetical protein VspiD_02525 [Verrucomicrobium spinosum DSM 4136] Length = 334 Score = 81.7 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 84/269 (31%), Gaps = 79/269 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+S G+ R+ T ++VD G Sbjct: 2 LSLTVLGSGSS-------GNCAV----------LRT-----------ERTCLLVDAGLSA 33 Query: 65 Y--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 Q L + V +D +L TH H DH G++ L +K + ++ P + L Sbjct: 34 RRITQRLEQVGLSVGQLDGILLTHEHGDHTAGLE-----VLCRKHEVPLFCTPLTQETLM 88 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 SF +++ + H + +GF Sbjct: 89 SSFE-----------KARPRWRIMQTGAA-----FQFQDLRIECFPVPHDAVDPVGFLIQ 132 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------------------SSH 217 + + +DV ++L+ + L ++A +G H Sbjct: 133 DEDSRLGVLSDVGFITNLIRDRLKGVHTLFMEANYDGPLLEADTKRPWATKQRISGRHGH 192 Query: 218 FSLSESLKKIELINPK---NAILTHMHVD 243 S ++ + ++ + + + IL H+ D Sbjct: 193 LSNEQAAELVQHLAHEHLQHVILGHLSED 221 >gi|262279084|ref|ZP_06056869.1| coenzyme PQQ synthesis protein B [Acinetobacter calcoaceticus RUH2202] gi|262259435|gb|EEY78168.1| coenzyme PQQ synthesis protein B [Acinetobacter calcoaceticus RUH2202] Length = 303 Score = 81.7 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 101/311 (32%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C T N RT+SS+ +S V+++ PD Sbjct: 5 VLGSAAGGGFPQWNCNCPNCHGVRTGTINAKPRTQSSIAVSENGTDW----VLLNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I +V+ DH G+ L++ P++V+ Sbjct: 61 RQQLFEFKAAQPARKLRDTGITSVILMDSQLDHTTGL-----LTLREGCPMNVWCTEMVH 115 Query: 116 KHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQHGRIS 172 + L F K + +NP D ++ +I+ A P H Sbjct: 116 QDLTSGFPVFNMLKHWNGGLQYHEINPKQAFKIDGFENLEFIPLIIKSAAPPYSPHRNDP 175 Query: 173 SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------------- 209 G + Y + + ++ +Q+ D ++ID Sbjct: 176 HDGDNIALVIKDHKTQKQLFYAPGLGKIDDQIMQIMQSSDCVMIDGTLWTDDEMQQTGVG 235 Query: 210 -KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKSTPSRV 257 K G H +S SL + ++ +L H++ + + + V Sbjct: 236 KKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNENSSQFAELKA---NGV 292 Query: 258 VPAFDGMQFSS 268 A+DGMQ Sbjct: 293 EVAYDGMQIEL 303 >gi|107025603|ref|YP_623114.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia cenocepacia AU 1054] gi|116693215|ref|YP_838748.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia cenocepacia HI2424] gi|105894977|gb|ABF78141.1| Coenzyme PQQ biosynthesis protein B [Burkholderia cenocepacia AU 1054] gi|116651215|gb|ABK11855.1| coenzyme PQQ biosynthesis protein B [Burkholderia cenocepacia HI2424] Length = 307 Score = 81.7 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 104/322 (32%), Gaps = 73/322 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCANCRRARSGSGHVLSRTQSSIAVSDDGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AV+ DH+ G+ LR ++ P+ +YA+ Sbjct: 57 SPDILSQLRAAPDLQPARAIRDSGIAAVVLCDAQIDHVTGLLMLR----ERSTPLPLYAS 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L L V I + + G AI + + Sbjct: 113 APVLDDLSTGLP-LVPLLGHYCG---VAAHTIVPGEPFAVPAARGIRFTAIAVDSKPPPY 168 Query: 172 ----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------- 208 ++ +VA Y + + + + D +++D Sbjct: 169 SPRRASAAPGDNIALSIEDVASGRRAFYAPGLASVTDDVRAAMDGADLVLVDGTFWTGTE 228 Query: 209 -LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDLDY 246 + GL H L++ + ++ + + +LTH++ +++ Sbjct: 229 MIDLGLSGKHASDMGHLAQCAEPGQPGMIDWLDTLPARTRKVLTHINNTNPILDPHSVEH 288 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + A DGMQF Sbjct: 289 AHLRA---HGIDVAHDGMQFQV 307 >gi|254281847|ref|ZP_04956815.1| coenzyme PQQ biosynthesis protein B [gamma proteobacterium NOR51-B] gi|219678050|gb|EED34399.1| coenzyme PQQ biosynthesis protein B [gamma proteobacterium NOR51-B] Length = 314 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 103/324 (31%), Gaps = 75/324 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRS--SLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + N R R+ S+ +S ER ++ + Sbjct: 1 MRIRVLGAAAGGGFPQWNCNCANCHGVRSGTLNTRARTQSSIAVSVDGERW----ILFNA 56 Query: 61 GPDFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ + I+A++ DH G+ L++ P+ VYA Sbjct: 57 SPDIRAQLEHFPEIHPRGVRGTGIEAIVLVDSQIDHTTGL-----LMLREGCPLKVYATD 111 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAI------PIL 165 + L F FK LD ++ ++ + + ++ G + A+ P Sbjct: 112 MVQQDLSTGFP-IFKMLD--SWDGGIDYHQLAIDGSSFEVEGIDGLRLTAVALTGKAPPY 168 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 H R G G +V Y + +Q D +++D Sbjct: 169 SPHRRNPHPGDNIGLLIEDTLGGSSVFYAPGLGDVDDRLTTIMQRCDCVMVDGTFWQED- 227 Query: 216 SHFSLSESLK--------------------KIELINP---KNAILTHMH----VDLDYDM 248 +L IE + + IL H++ + ++ Sbjct: 228 -----EMALAGVGTRLASEMGHLPQSGRGGMIEKLRALPEQRKILIHINNTNPILIEDSK 282 Query: 249 VLKST-PSRVVPAFDGMQFSSPIP 271 + + AFDGM+ P Sbjct: 283 QREQLNDEGIEVAFDGMEVDLGRP 306 >gi|330001425|ref|ZP_08304006.1| PhnP domain protein [Klebsiella sp. MS 92-3] gi|328537667|gb|EGF63880.1| PhnP domain protein [Klebsiella sp. MS 92-3] Length = 125 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 10/119 (8%) Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL--- 209 + P+ H ++ + G+ +A+ +D P ++L+ L N +IID Sbjct: 7 LRVTPLPLNHSKL-TFGYLLESAHSRLAWLSDTAGLPDKTLKFLLNNRPQAMIIDCSHEP 65 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + +H L+ ++I ILTH+ D M+ P+ +DGM+ + Sbjct: 66 RAQTPRNHNDLNTVRSLNQVIGCPRVILTHISHQFDVWMMDNPLPTGFEAGYDGMEIAL 124 >gi|197362821|ref|YP_002142458.1| hypothetical protein SSPA1618 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197094298|emb|CAR59807.1| hypothetical protein SSPA1618 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 305 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 52 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 111 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 112 QVYGPPGTQAMTKASWKVFDRDITLRMEEEEKPDPR-NLVKATDIGQGVIYKDELVTISA 170 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 171 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 229 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 230 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQEAMKNY 289 Query: 254 PSRVVPAFDGMQFSSP 269 P V+ D M S P Sbjct: 290 PGPVIVGHDNMTISVP 305 >gi|307155164|ref|YP_003890548.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7822] gi|306985392|gb|ADN17273.1| beta-lactamase domain protein [Cyanothece sp. PCC 7822] Length = 296 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 82/248 (33%), Gaps = 42/248 (16%) Query: 54 TTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +I D G + + L ++ + +TH H DHI G F+ +Y Sbjct: 43 QRLIFDGGTGIRILGESLLSKLPVNGHIFFTHSHWDHIQGFPFFVPAFIP-GNHFKIYGI 101 Query: 112 PD-----CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 P + L + + P + ++ D+ I +E Sbjct: 102 PAPNGATVQQRLHDQM-----LHPNFPVPLQIMQAQLQFYDLEIGESIQLEDVEIETARL 156 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA--LKNGLHSS 216 H ++G+R + AY TD FP L+ +N D +IIDA H+ Sbjct: 157 NHPG-EAIGYRINWRGLSAAYLTDTEHFPDRLDENVLKLARNADVVIIDATYTDEEYHNP 215 Query: 217 --------HFSLSESLKKIELINPKNAILTHMHVDLDYDM-------VLKSTP-SRVVPA 260 H + E++K + N K +L H D +D S + A Sbjct: 216 KSSKVGWGHSTWQEAVKIAQAANVKQLVL--FHHDPSHDDNFLDRIGEKASLAFPHTILA 273 Query: 261 FDGMQFSS 268 +GM Sbjct: 274 REGMAIEL 281 >gi|311029469|ref|ZP_07707559.1| Metallo-beta-lactamase family protein [Bacillus sp. m3-13] Length = 247 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 83/235 (35%), Gaps = 31/235 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP 105 N +++D G Q+ +V +DAV+ +H H DH+ I L R + Sbjct: 25 EHENFKLLIDCGSGVLAQLQNYIEVTEVDAVILSHYHHDHVADIGPLQFARLISFYMGKS 84 Query: 106 I---DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y + M+ F LD + Y + + +V I + Sbjct: 85 VTQLPIYGHQEDMQG--------FSTLDHKEYTKGIAYDPSKTLEVGPFKIEFLKTIHPV 136 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SSH 217 P ++S+ G+ Y D + + + + D LI + H + H Sbjct: 137 PCYAM--KVSTD---EGSFVYTADTS-YQESFIPFTKGTDLLICEC-NLYAHQDGKAAGH 189 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGMQFSS 268 + ++ K + +LTH+ + + +++ ++ A G + S Sbjct: 190 MNSHDAAKVAQGAEVPQLLLTHLPHFGEVEQLVEEAATIYKGKIDLAHKGFSWES 244 >gi|218530114|ref|YP_002420930.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium chloromethanicum CM4] gi|254782807|sp|B7KXC8|PQQB_METC4 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|218522417|gb|ACK83002.1| coenzyme PQQ biosynthesis protein B [Methylobacterium chloromethanicum CM4] Length = 299 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 110/309 (35%), Gaps = 59/309 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A GVP+ C + + R RT+SS+ +S ER ++++ Sbjct: 1 MHVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGERW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA Sbjct: 57 SPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFSLYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVI 159 P + + ++ F + R P + + VP+ ++ A I Sbjct: 112 PGILASVSDNRVFDVMAAEVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEI 171 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKN 211 A G + G + +AY + ++ D L+ D ++ Sbjct: 172 GAE-TETTVGTMIEAGGK--RLAYIPGCAGVTEDLKARIAGADALLFDGTVLEDDDMIRA 228 Query: 212 GLHSS------HFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV---- 258 G+ + H + + S+ + + + H++ + S + V Sbjct: 229 GVGTKTGWRMGHIQMNGETGSIASLADVEIGRRVFVHINNTNPVLIEDSSERASVEARGW 288 Query: 259 -PAFDGMQF 266 A DG+ Sbjct: 289 TVAHDGLTL 297 >gi|295836841|ref|ZP_06823774.1| metal-dependent hydrolase [Streptomyces sp. SPB74] gi|295826228|gb|EFG64743.1| metal-dependent hydrolase [Streptomyces sp. SPB74] Length = 250 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 92/280 (32%), Gaps = 56/280 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S +P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSIPSTDSPC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCMK 116 ++ R + +DAV+ +H HADH ID + ++ RP+ VY + Sbjct: 40 LGELQRHIGLHDLDAVVISHLHADHC--IDMCAYFVVRYYNADPLTSRPLPVYGPEGTEE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + + ++ I G +H + + GF Sbjct: 98 RLTAGHG---DTPTLSAMAEVFDFHTLKPGSFRI------GPFTLHAEQVRH-PVEAYGF 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL----KNGLHSSHFSLSESLKKI 227 R ++ Y D P+ +L++L + D + +A K + H + E+ + Sbjct: 148 RVEHGGRSLTYSGDTG--PSPALDQLAADSDLFLCEAAFTDGKEEIPDLHLNGREAGESA 205 Query: 228 ELINPKNAILTHMHVDLDYD---MVLKSTPSR-VVPAFDG 263 + + +LTH+ D + V A G Sbjct: 206 QRAGARRLVLTHIPPWTDPQLNLTAAREVYEGPVELAHTG 245 >gi|189240495|ref|XP_968692.2| PREDICTED: similar to AGAP009743-PA [Tribolium castaneum] gi|270012571|gb|EFA09019.1| hypothetical protein TcasGA2_TC006728 [Tribolium castaneum] Length = 827 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 114/312 (36%), Gaps = 75/312 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D+ LG G+S +P N+ +S + E NT++++D G Sbjct: 508 RDFPRLLFLGTGSS--IP---------------NKTRNTSGML---LEIDENTSIVIDCG 547 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL---------------RGY 98 Q++R ++ I AV +H HADH G+ G+ + Sbjct: 548 EGTVGQIIRFYGQDKANAELAKIRAVYISHLHADHHLGLIGVLQGRQRAMQKLEKGAQPL 607 Query: 99 FLKQKRPIDVYAA--PDCMKHLFESF-----RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 FL + I + C + + E F F ++ ++ ++E + Sbjct: 608 FLLAPKQIMWWLNFYDRCFEKISEEFVLVPNGELF--FNNHELDQLLEKQLLEGLQM--- 662 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALK 210 + +++ P + G++ Y D P+E+L +L + D LI +A Sbjct: 663 RDISTCLVKHCPNAFGVSFVHQNGYKI---TYSGDT--MPSENLVQLGKTSDLLIHEATM 717 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV---LKSTPSRVVPAF 261 ++ H + S++++ + K +LTH Y + ++ V AF Sbjct: 718 EDELAAEAVIKMHSTTSQAIEIGRQMEAKYTLLTHFSQR--YAKLPRFNENFSDNVGIAF 775 Query: 262 DGMQF---SSPI 270 D M+ P+ Sbjct: 776 DNMRVKLDELPL 787 >gi|289661999|ref|ZP_06483580.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 299 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 105/317 (33%), Gaps = 71/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S R V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADDARW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFES--FR-----YCFKALDDRTYPPIVNPIVIENNDVP-----ICMKSAGGVI 159 + L ++ F Y + P ++ + + VP +GG + Sbjct: 112 SRVLDLLAQNPIFDAVSPQYVSRQPFALDTPLALSGLQLTPFSVPGKVPLFMESRSGGDL 171 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 +LG + + Y A E +LQ + + D Sbjct: 172 AG-------SNEETLGLTIDDGRHRMHYIPGCAAMTDELRARLQGAELVFFDGTLWRDDE 224 Query: 210 --------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 225 MVQLGISQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNP--VLNTQSPEFAS 282 Query: 256 ----RVVPAFDGMQFSS 268 A DG++ + Sbjct: 283 ARASGWEVAHDGLEIAL 299 >gi|116873412|ref|YP_850193.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466485|sp|A0AK82|RNZ_LISW6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116742290|emb|CAK21414.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 306 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 94/328 (28%), Gaps = 100/328 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER T + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--KTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q I +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSTITIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I N++ + + I +HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKIIFNEIEPGLIFEDKMFSVIADDLEHG-VRSFGYRIVE 151 Query: 179 ------------------------------------GNVA----YC------------TD 186 G V Y D Sbjct: 152 KDKQGALNAEKLKAEGIEAGPIFQKLKNGEVVELEDGRVVDGKNYIGEPQKGKIISIFGD 211 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHM 240 A LE N D L+ +A G H + ++ + N K ILTH+ Sbjct: 212 TKE-TASELELALNADILVHEATFEGDKGKMAGEYMHSTTLQAANLAKKANVKKLILTHI 270 Query: 241 HVDLDYDMVLKSTP------SRVVPAFD 262 D D A+D Sbjct: 271 SSRYDRDASKALLIEAKSVFENTEIAYD 298 >gi|254561183|ref|YP_003068278.1| beta-lactamase-like protein [Methylobacterium extorquens DM4] gi|254268461|emb|CAX24418.1| Beta-lactamase-like [Methylobacterium extorquens DM4] Length = 243 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 47/277 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G R + + +++D G Sbjct: 1 MRLHVLGCGDAFG----------------SGGRFNTCFHVDAPG-----GALLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 + + R V I V TH H DH G+ L + P+ V P + L Sbjct: 40 LIAIRRFGVEPNRIRTVFLTHLHGDHFGGLPWLILDGQLVSGRTEPLIVVGPPGTAERLP 99 Query: 120 ESFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGF 176 + F + +R +P +E D+ G + A +H + Sbjct: 100 AAMEVLFPGSSTAERRFP-------VEVVDMEAGRPVETGGVRATAFTMRHPSGAPAHAL 152 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELIN 231 R V+Y D + + + D +I + H + +++ I Sbjct: 153 RIEAAGKVVSYTGDTEWV-EDIVAAGRGADLMIAEGYTVERPVKFHLDWATLKRRLPEIA 211 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 PK +LTHM ++ + P + A DG+ + Sbjct: 212 PKRLMLTHMSPEM-----IAHPPDGYIAAEDGLVLTL 243 >gi|86741815|ref|YP_482215.1| adenosylcobinamide kinase [Frankia sp. CcI3] gi|86568677|gb|ABD12486.1| adenosylcobinamide kinase [Frankia sp. CcI3] Length = 507 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 91/286 (31%), Gaps = 59/286 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G++ G P D +C R ++++ I + +++D GPD Sbjct: 1 MKVTLLGTGSADGWPNPWCDCASCAWAREHEVRGQTAVLI--------DDALLIDCGPDV 52 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG---LRGYFLKQKRPIDVYAAPDCMKHLF 119 R V + +L +H H DH+ R + RP+DV P + Sbjct: 53 PRTAARLGVRLSGLRHLLISHAHPDHLG--PESLMWRSWSTAAGRPLDVVGPPAALAACR 110 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--------------------- 158 E ++ DR P+ V+ G Sbjct: 111 EFLARWERSDPDRDGSPLRLIAVVPGGTPTTPGPLRLGADDRQAAEDRGSPEDQESPSDR 170 Query: 159 -IEAIPILQQHGR--------ISSLGFRFGNVAYCTDVNA-FPAESLEKLQN--LDFLII 206 P+ QHG G + Y D A PAE+LE + D +++ Sbjct: 171 GYLVRPVAAQHGDASIGPAVLYDVTAPDGGRLLYGCDTAAPLPAETLEAVTGRAYDVVLL 230 Query: 207 ---DALKNGLHSSHFSLSESLKKIELINPKNAIL-------THMHV 242 + + G H L + + + + A++ H+ Sbjct: 231 EENNGDRPGFGE-HLDLDTFGQLVAELRRRGAVVPSTLVLAVHLSH 275 >gi|124267770|ref|YP_001021774.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylibium petroleiphilum PM1] gi|124260545|gb|ABM95539.1| coenzyme PQQ synthesis protein B [Methylibium petroleiphilum PM1] Length = 310 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 89/313 (28%), Gaps = 56/313 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 +LG GA G P+ + C +R RT+SS+ IS +R D Sbjct: 1 MKVLVLGSGAGGGCPQWNCNCAMCAAARNGSRLIRPRTQSSIAISPDGQRWVLLNASPDI 60 Query: 61 GPDFYMQ-VL--REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G +Q L + + I AV+ DH G+ L++ PI++Y P Sbjct: 61 GQQLRVQPALHPKHGLRDSPIKAVVLMDAQIDHATGL-----LSLREGPPIELYVTPCVF 115 Query: 116 KHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L YC + A + P H Sbjct: 116 EDLTTGLPILTVLDHYCGVHWHMLPVAGEQRVAEFSVDGFETLRFRAVAIPGKAPPYSPH 175 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 +G + Y + L+ +++ D L++D Sbjct: 176 RHDPKVGDNIALEVTDRMTGKRLFYAPGLADVGDVELQWMRDADCLLVDGTFWTEDEMVQ 235 Query: 219 ------------SLSES--------LKKIELINPKNAILTHMHVDL----DYDMVLKST- 253 L +S + ++ +L H++ DY Sbjct: 236 AGLGSKFASDMGHLPQSGSPQRGGMMDALDRTGAHRKLLIHINNSNPILDDYGAERAELA 295 Query: 254 PSRVVPAFDGMQF 266 + A DGM+ Sbjct: 296 RRGIEVAHDGMEI 308 >gi|254468458|ref|ZP_05081864.1| cAMP phosphodiesterase class-II [beta proteobacterium KB13] gi|207087268|gb|EDZ64551.1| cAMP phosphodiesterase class-II [beta proteobacterium KB13] Length = 256 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 54/258 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK+ + ILGC S+G G + C N +++D Sbjct: 1 MKNNFK--ILGCSGSVG----KGGYTTC---------------------FQINDDILIDA 33 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYAAPDCMKHLF 119 G Q E + I+ + TH H DHI GI L + +PI+V+ + D + ++ Sbjct: 34 GSGLLDQDFDE-LKKINKIFLTHSHLDHILGIPLLADLVGNYRDQPIEVFGSNDTIINIK 92 Query: 120 ESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 ++ F D + P + ++ + + + A + P H + G++ Sbjct: 93 KN---IFNGVIWPDFSVIPTESKPYLKFSSINTEIPKAVDQFKITPFYVNH-TVRCFGYK 148 Query: 178 FGN----VAYCTDVNAFPAESLEKL----QNLDFLIIDALKNGLHSS------HFSLSES 223 + + + D P+E+L ++ +NL +IID + HF+ +S Sbjct: 149 IESQDQAIIFSGDTG--PSENLIRMINETKNLAAVIIDVSFQDKRQNIADLSRHFT-PQS 205 Query: 224 LK-KIELINPKNAIL-TH 239 L ++ IN K AI TH Sbjct: 206 LAKAVKAINDKQAIFITH 223 >gi|58581358|ref|YP_200374.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623293|ref|YP_450665.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|75435873|sp|Q5H232|PQQB_XANOR RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|123522451|sp|Q2P4Y6|PQQB_XANOM RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|58425952|gb|AAW74989.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367233|dbj|BAE68391.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 299 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 97/315 (30%), Gaps = 67/315 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADGERW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI-- 106 PDF Q+L ++ + I AVL T DHI G+ +R + L R + Sbjct: 57 SPDFRQQILATPALWPQQGLRHSPIKAVLLTSGEIDHIAGLLSMRESQPFALHASRRVLD 116 Query: 107 -----DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 ++ + A + + P + +GG + Sbjct: 117 LLAQNPIF--DAVNPQYVSRQPFTLNAPLTVSGLQ-LTPFSVPGKVPLFMESRSGGDLAG 173 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 + +LG + V Y A +L + + D Sbjct: 174 -------SQEETLGLTIDDSQHRVHYIPGCAAMTDALRARLHGAELVFFDGTLWRDDEMV 226 Query: 210 ------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 227 QLGISQKTGQRMGHMSIDGPEGTIAAFAPLNVARKIFIHLNTTNP--VLNTQSPEFATAR 284 Query: 256 --RVVPAFDGMQFSS 268 A DG++ + Sbjct: 285 ASGWEVAHDGLEIAL 299 >gi|170746952|ref|YP_001753212.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium radiotolerans JCM 2831] gi|226704956|sp|B1LUE9|PQQB_METRJ RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|170653474|gb|ACB22529.1| coenzyme PQQ biosynthesis protein B [Methylobacterium radiotolerans JCM 2831] Length = 299 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 101/314 (32%), Gaps = 65/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G+P+ C + R R + S + ++++ PD Sbjct: 1 MRVVILGSAAGGGLPQWNCRCPICTLARSEPDRVRPRTQSSIAVSADGSDWLLINASPDI 60 Query: 65 YMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ RE + I AVL T+ DH+ G+ L++ +P +Y + Sbjct: 61 RQQLFDNPQMHPREGLRHSPIRAVLLTNGDVDHVAGL-----LTLREGQPYTLYGTRGIL 115 Query: 116 KHLFES-----------------FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + F+ L + P VP+ ++ Sbjct: 116 DSVNANRVFDVMAEGVVARQPIGMDQRFEPLPGLSVTLFPVP-----GKVPLWLEDETME 170 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LK 210 I A G + G R +AY ++ +D L+ D ++ Sbjct: 171 IGAE-TETTVGALIEAGGR--RLAYIPGCARVTDGLRARIAGVDALLFDGTVLHDDDMIR 227 Query: 211 NGLHSS------HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV---- 257 G+ + H + + + + + + H++ ++++ +P RV Sbjct: 228 AGVGTKTGWRMGHVPMRGANGSIDALAAVEIGRRVFVHINNTNP--VLVEGSPERVDVEA 285 Query: 258 ---VPAFDGMQFSS 268 A DG+ S Sbjct: 286 AGWTVAHDGLSLSL 299 >gi|299770208|ref|YP_003732234.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. DR1] gi|298700296|gb|ADI90861.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. DR1] Length = 303 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 99/311 (31%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C RT+SS+ +S V+++ PD Sbjct: 5 VLGSAAGGGFPQWNCNCPNCHGVRTGSIQAKARTQSSIAVSENGTDW----VLLNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I +V+ DH G+ L++ P++V+ Sbjct: 61 RQQLFEFKAAQPARKLRDTGITSVILMDSQLDHTTGL-----LTLREGCPMNVWCTEMVH 115 Query: 116 KHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQHGRIS 172 + L F K + +NP D ++ +I+ A P H Sbjct: 116 QDLTSGFPVFNMLKHWNGGLQYNEINPKQAFKIDGFENLEFLPLIIKSAAPPYSPHRNDP 175 Query: 173 SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID--------------A 208 G + Y + + ++ +Q+ D ++ID Sbjct: 176 HDGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQSSDCVMIDGTLWTDDEMQQTGVG 235 Query: 209 LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKSTPSRV 257 K G H +S SL + ++ +L H++ + + + V Sbjct: 236 TKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNENSSQFAELKA---NGV 292 Query: 258 VPAFDGMQFSS 268 A+DGMQ Sbjct: 293 EVAYDGMQIEL 303 >gi|311696031|gb|ADP98904.1| pyrroloquinoline quinone biosynthesis protein PqqB [marine bacterium HP15] Length = 309 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 103/313 (32%), Gaps = 69/313 (22%) Query: 9 ILGCGASLGVPRITGDWGACD--PTNPKNRRTRS--SLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + CD N R R+ S+ IS E ++ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCDGFRKGTLNARARTQSSIAISEDGEHW----ILFNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + IDA++ DH G+ L++ P+DV+ Sbjct: 61 RAQLASFDAMQPARALRDTGIDAIVLMDSQVDHTTGL-----LSLREGLPMDVWCTEQVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENND-VPICMK-SAGGVIEAIPILQQHGRI-- 171 + L F F L + +N IE ++ P + + + AIP+L Sbjct: 116 EDLSGGFP-LFTMLKH--WNGGLNWQRIEASEQTPFTIPCAPSIELTAIPLLSNAPPYSP 172 Query: 172 ----SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 G G V Y + L ++ D L++D H Sbjct: 173 RRDNPHPGDNIGLFLKDTRTGQTVLYAPGLGEPDDRILGWMRQADVLMVDGTVW--HDDE 230 Query: 218 F--------------SLSES-----LKKIELINPKNAILTHMHVDL-----DYDMVLKST 253 L++S ++ ++ + + IL H++ D + T Sbjct: 231 MIRQEVGTKTGQAMGHLAQSGPGGMIEVLDAMPAQRKILIHINNTNPILNEDSAERAELT 290 Query: 254 PSRVVPAFDGMQF 266 + ++DGM Sbjct: 291 RHGIEVSWDGMHI 303 >gi|282162849|ref|YP_003355234.1| hypothetical protein MCP_0179 [Methanocella paludicola SANAE] gi|282155163|dbj|BAI60251.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 241 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 26/231 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 V++D G + + +D + +H H DHI G+ + L + ++ Sbjct: 25 EADGRHVVLDAGNGIHKLGRYIKNKPVD-LFLSHYHFDHIEGLHTIVMLPL---ESLRIF 80 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 K L + + P+ + + ++ G ++ + P Sbjct: 81 GMEGTEKALRAIIKKPYTVPLGEGPFPVEVYELPRDRAKAPYLEDFGLLMHSDP------ 134 Query: 170 RISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK-NGLHS---SHFSLS 221 +G+RF +AYCTD + ++ D LI + + G HS H + Sbjct: 135 ---CMGYRFRLGGLTIAYCTDT-GLCDNLIRLGRDADLLITECSELPGRHSDRWPHLNPE 190 Query: 222 ESLKKIELINPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSS 268 ++L E K LTH + L ++ + + ++ A+DG++ Sbjct: 191 DALAAAEKSGAKKLALTHFNAHLYDTPGARKEIERSNNGLIAAYDGLELEL 241 >gi|262045480|ref|ZP_06018502.1| phosphonate metabolism protein PhnP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037173|gb|EEW38422.1| phosphonate metabolism protein PhnP [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 125 Score = 80.9 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 10/117 (8%) Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIIDAL---KN 211 P+ H ++ + G+ +A+ +D P ++L+ L N +IID + Sbjct: 9 VTPLPLNHSKL-TFGYLLESAHSRLAWLSDTAGLPDKTLKFLLNNRPQAMIIDCSHEPRA 67 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H L+ ++I ILTH+ D M+ P+ +DGM+ + Sbjct: 68 QTPRNHNDLNTVRSLNQVIGCPRVILTHISHQFDVWMMDNPLPTGFEAGYDGMEIAL 124 >gi|282865128|ref|ZP_06274181.1| beta-lactamase domain protein [Streptomyces sp. ACTE] gi|282560051|gb|EFB65600.1| beta-lactamase domain protein [Streptomyces sp. ACTE] Length = 250 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 55/282 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAGSAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + ++ R P+ VY + Sbjct: 40 LGELQRHVGLYDLDAIFLSHLHADHC--IDMCAYFVVRYYRFDGGRPAPVPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + D + + +++ I G H + + G Sbjct: 98 RLTTAHA---DTPSDHAMGEVFDFRTLKSGSFEI------GPFSVRTEQVSH-PVETFGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D E + D + +A K + H + E+ + Sbjct: 148 RIEHNGRTLVYSGDTGTC-EALDELAEGADLFLCEASFVHGKEDIPGLHLNGREAGEYAA 206 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG-MQFSSP 269 +LTH+ D + +DG ++ ++P Sbjct: 207 RAGAGRLVLTHIPPWTDAERNRADARD----VYDGPVELAAP 244 >gi|163851246|ref|YP_001639289.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium extorquens PA1] gi|254560945|ref|YP_003068040.1| pyrroloquinoline quinone (PQQ) biosynthesis protein B [Methylobacterium extorquens DM4] gi|226704954|sp|A9W3R2|PQQB_METEP RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|163662851|gb|ABY30218.1| coenzyme PQQ biosynthesis protein B [Methylobacterium extorquens PA1] gi|254268223|emb|CAX24158.1| Pyrroloquinoline quinone (PQQ) biosynthesis protein B [Methylobacterium extorquens DM4] Length = 299 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 110/309 (35%), Gaps = 59/309 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A GVP+ C + + R RT+SS+ +S ER ++++ Sbjct: 1 MHVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGERW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA Sbjct: 57 SPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVI 159 P + + ++ F + R P + + VP+ ++ A I Sbjct: 112 PGILASVSDNRVFDVMAAEVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEI 171 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKN 211 A G + G + +AY + ++ D L+ D ++ Sbjct: 172 GAE-TETTVGTMIEAGGK--RLAYIPGCARVTEDLKARIAGADALLFDGTVLEDDDMIRA 228 Query: 212 GLHSS------HFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV---- 258 G+ + H + + S+ + + + H++ + S + V Sbjct: 229 GVGTKTGWRMGHIQMNGETGSIASLADVEIGRRVFVHINNTNPVLIEDSSERASVEARGW 288 Query: 259 -PAFDGMQF 266 A DG+ Sbjct: 289 TVAHDGLTL 297 >gi|156741148|ref|YP_001431277.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232476|gb|ABU57259.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 257 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 74/194 (38%), Gaps = 20/194 (10%) Query: 56 VIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQ---KRPIDVYA 110 V++D G Y ++LR V + A++ TH HADH++G+ GL + LK R + +Y Sbjct: 31 VLIDAGGSTYQRLLRAGVNPRDLRAMILTHSHADHLNGLPGLL-FSLKLAGYDRRLPIYG 89 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + +A + TY P + I +E D I + A I P H R Sbjct: 90 NAPTLTAAQR----ILEAFNLETYQPDIEWIPVEAGDE-ITLDGALYHIHTAPT--VHSR 142 Query: 171 ISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 L RF + + Y D + + LI +A H S ++ + Sbjct: 143 -PCLALRFDSDNRRALVYSADTEPC-DAVRDLARGAAVLIHEATTPEPFPGHTSPYQAGE 200 Query: 226 KIELINPKNAILTH 239 +L H Sbjct: 201 VAAAAGVARLVLVH 214 >gi|325914169|ref|ZP_08176522.1| coenzyme PQQ biosynthesis protein B [Xanthomonas vesicatoria ATCC 35937] gi|325539672|gb|EGD11315.1| coenzyme PQQ biosynthesis protein B [Xanthomonas vesicatoria ATCC 35937] Length = 299 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 102/323 (31%), Gaps = 83/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASLRAWHQTDGAQRRTQASIAVSADGERW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFTLHAS 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ F A +NP + + ++ P G++ Sbjct: 112 SRVLDLLAQNP--IFDA---------INPQYVTRQPFALDTPVPLLDLQLTPFSVP-GKV 159 Query: 172 S-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 +LG + V Y A +LQ + + D Sbjct: 160 PLFMESRSDGDLAGSNEETLGLTIDDGQHRVHYVPGCAAMTDALRARLQGAELVFFDGTL 219 Query: 209 -----------LKNGLHS-SHFSL---SESLKKIELINPKNAILTHMH--------VDLD 245 + H H S+ ++ ++ I H++ Sbjct: 220 WRDDEMVTLGVSQKTGHRMGHMSIDGPDGTIAAFAPLDVARKIFIHINTTNPVLDIHSPQ 279 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 Y S A DG++ + Sbjct: 280 YASARA---SGWDVAHDGLEITL 299 >gi|294055740|ref|YP_003549398.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] gi|293615073|gb|ADE55228.1| beta-lactamase domain-containing protein [Coraliomargarita akajimensis DSM 45221] Length = 274 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 61/233 (26%) Query: 50 RGSNTTVIVDTG-PDFYM-QVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R N+ +++D G + ++L E + ++DAV TH H+DH GI RG +Q Sbjct: 20 RTENSKILIDAGFSGKRICEMLGTIDETIDTLDAVFLTHEHSDHAQGI---RGLSKRQ-- 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V+A D + VN V + + + ++ Sbjct: 75 DLPVFANRDTADAVQA------------KLTKTVNWQVFQTG-----TEFSFRDLQIRSF 117 Query: 165 LQQHGRISSLGFRF------------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 H +G+ F ++A+ TD+ P +Q +D L+++A Sbjct: 118 ALPHDAYDPVGYCFQWGTEGDLFQQPQSLAWVTDLGYVPEHVRSHIQTVDTLVLEANYDE 177 Query: 209 --------------LKNGLHSSHFSLSESLKKIELI----NPKNAILTHMHVD 243 + H S + + + + PK L H+ D Sbjct: 178 QLLDADTKRPWSTKQRIRGRHGHLSNDAAYELLRQLAPEVRPKRVFLAHLSKD 230 >gi|300863642|ref|ZP_07108581.1| Ribonuclease Z [Oscillatoria sp. PCC 6506] gi|300338350|emb|CBN53725.1| Ribonuclease Z [Oscillatoria sp. PCC 6506] Length = 329 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 86/290 (29%), Gaps = 73/290 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q LR +V + + TH H DHI G+ GL + ID+Y ++L Sbjct: 42 QHQFLRSELKVSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVKRIDLYGPSGLDEYLQA 101 Query: 121 -------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS- 172 F Y K ++ + I + +A G Q H + Sbjct: 102 CVRYSQTHFSYPMKVHKNQVGVIFEDEEYIVSCGYLKHRVTAFGYRVTEKDRQGHFDVEK 161 Query: 173 --SLGFRFG---------------------------------NVAYCTDVNAFPAESLEK 197 +LG FG YCTD E++E Sbjct: 162 AKALGIPFGPLYGELKNGKIVTLPDGRTFNGADFCGPAQKGRTFVYCTDTVYC-DEAVEL 220 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D L+ +A + H + + + + K I+TH Sbjct: 221 ARDADVLVHEATFSHQDAQMAFDRLHSTSTMAAQVALRAGVKQLIMTHFS 270 >gi|262068222|ref|ZP_06027834.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] gi|291378090|gb|EFE85608.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum ATCC 33693] Length = 259 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++++ +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEMIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ K + ++ +I+ D + ++ +P Sbjct: 75 PIYITPESYKA-------------GASKLGQIDKSLIKFIDGAFILDD---KVKVLPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GFR +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFRLESQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCSYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|319791398|ref|YP_004153038.1| coenzyme pqq biosynthesis protein b [Variovorax paradoxus EPS] gi|315593861|gb|ADU34927.1| coenzyme PQQ biosynthesis protein B [Variovorax paradoxus EPS] Length = 308 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 98/325 (30%), Gaps = 78/325 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 +LG GA G P+ + C +P RT+SS+ +S + V+ Sbjct: 1 MKILVLGSGAGGGFPQWNCNCRLCAGQRTGEVRASP---RTQSSIAVSANGDDW----VL 53 Query: 58 VDTGPDFYMQVL---------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ PD Q+ R V I AV+ DH+ G+ L++ + + Sbjct: 54 LNASPDIGAQLRASKALHPRPRHGVRHSPIQAVVLMDSQIDHVAGL-----LSLREGQRL 108 Query: 107 DVYAAPDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +Y P+ + L S YC P + G Sbjct: 109 QLYCTPESYEDLTGSLPLLKALDKYCGVTWHPMPLEPGGGARHEIAGLRLQAVPVPGKAP 168 Query: 160 EAIPILQQHGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDALK--- 210 P Q R + + A Y + + L D +++D Sbjct: 169 PYSPRRQTEARSDNAAVLIEDPATGKRVLYAPGLAQVGDAERKSLDACDCVLVDGTFWTE 228 Query: 211 ----------------------NGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LD 245 +G H LK ++ K +L H++ LD Sbjct: 229 DEMLTAGLGTKRAADMGHLPQCDGPHGPGM-----LKALDACAAKRKVLIHINNSNPILD 283 Query: 246 YDMVLKS--TPSRVVPAFDGMQFSS 268 D ++ T + AFDGM+ Sbjct: 284 EDSAERAELTRRGIEVAFDGMELEI 308 >gi|240138587|ref|YP_002963059.1| Beta-lactamase-like protein [Methylobacterium extorquens AM1] gi|240008556|gb|ACS39782.1| Beta-lactamase-like protein [Methylobacterium extorquens AM1] Length = 243 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 87/277 (31%), Gaps = 47/277 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G G + C ++D G Sbjct: 1 MRLHVLGCGDAFG---SGGRFNTC------------------FHFDAPGGAFLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 + + R V I V TH H DH G+ L + P+ V P + L Sbjct: 40 LIAIRRFGVEPNRIRTVFLTHLHGDHFGGLPWLILDGQLVSGRTEPLTVVGPPGTAERLP 99 Query: 120 ESFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGF 176 + F + +R +P +E ++ G + A +H + Sbjct: 100 AAMEVLFPGSSTAERRFP-------VEVVEMEAGRPVETGGVRATAFTMRHPSGAPAHAL 152 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELIN 231 R V+Y D + + + D +I + H + +++ I Sbjct: 153 RIEAAGKVVSYTGDTEWV-EDIVAAGRGADLMIAEGYTVERPVKFHLDWATLKQRLPEIT 211 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 PK +LTHM ++ + P + A DG+ + Sbjct: 212 PKRLMLTHMSPEM-----IAHPPDGYIAAEDGLVVTL 243 >gi|123454390|ref|XP_001314950.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121897612|gb|EAY02727.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 601 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 97/291 (33%), Gaps = 70/291 (24%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T G G T P R + + + ++ ++ D G Sbjct: 323 QSFGITFTGTG----------------STYPSKYRNVAGILLHT-----TDGYIVFDAGE 361 Query: 63 DFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA 111 F Q++R E + + A+ +H H DH+ G L R + ++ Sbjct: 362 GFVGQIMRKFGIENCKEILKKLIAIFISHNHGDHVFGCYELLQTRSLV--TDEDVPIFCP 419 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ---QH 168 HL L + ++ ++ ++ S +E IP++ H Sbjct: 420 DQLRDHLLN--------LQKVSRFGNLHFHLLSREELTFSTGST--TLEFIPVIHCKGSH 469 Query: 169 GRI--SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHSSHFSL 220 + S G+R V Y D +F E +K+ D LI D + H ++ Sbjct: 470 AVVANISGGYR---VVYSGD-KSFSEEFAKKVGKCDLLIHESTFSDDLVDEATAKRHSTM 525 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKSTP-----SRVVPAFDGMQF 266 ++++ +L N K +LTH P + AFD + F Sbjct: 526 GQAIETGKLCNAKYIVLTHFSQRYP------KLPVFEGSGHIAFAFDYLSF 570 >gi|220925940|ref|YP_002501242.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219950547|gb|ACL60939.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 243 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 84/269 (31%), Gaps = 41/269 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G R + I+ + T ++D G Sbjct: 1 MEVRVLGCGDAFG----------------SGGRFNTCFHITTPA-----TRFLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 + + R V +I V TH H DH G+ L ++ P+ + + L Sbjct: 40 LIAMRRFGVEPNAIQTVFLTHLHGDHFGGLPFLILDAQLVSRRTAPLTIVGPSTLRERLA 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F T + +IE + + G + A P+ G S R Sbjct: 100 ALMEAMF--PGSSTVERRFDLRLIELGPE-MPTEVDGVTVTAFPVRHPSGA-PSYALRLA 155 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 + Y D + +D LI +A H + K + + K+ Sbjct: 156 CEGRTLCYTGDTEWV-DALYPAGREVDLLIAEAYTAERPVRYHLDWATLRKHLPAMAAKS 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 +LTHM D+ L P A DG Sbjct: 215 VLLTHMSPDM-----LDRIPEGCTAAEDG 238 >gi|298291054|ref|YP_003692993.1| coenzyme PQQ biosynthesis protein B [Starkeya novella DSM 506] gi|296927565|gb|ADH88374.1| coenzyme PQQ biosynthesis protein B [Starkeya novella DSM 506] Length = 312 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 110/317 (34%), Gaps = 61/317 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACD---PTNPK-NRRTRSSLKISRVSERGSNTTVIV 58 + +LG A G P+ C + + RRT++S+ +S + ++ Sbjct: 6 SRFRLVVLGSAAGGGFPQWNCRCPVCSLAWAGDERVRRRTQASIAVSADGLNWA----LI 61 Query: 59 DTGPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + P+ Q+ RE ++AVL T+ DH+ G+ L++ +P + Sbjct: 62 NCAPEILSQIQAVPALHPREGSRHSPVNAVLLTNADIDHVAGL-----LSLREAQPFTLL 116 Query: 110 AAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ- 166 A P + L S F + + R + + G + + + Sbjct: 117 ATPAVHEVLRSSSAFDVLAEGVVTRRPVALGESFELVEGVTATIFPVPGKIALYLEAREE 176 Query: 167 -QHGRI-------SSLG--FRFGNVA--YCTDVNAFPAESLEKLQNLDFLIID------- 207 + G + ++G R G+V Y A ++L+ D ++ D Sbjct: 177 AETGSLATDIEGEQTIGVELRAGDVRVLYIPGCAAMTDALRDRLEGADVVLFDGTLWQDD 236 Query: 208 -------ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHV------DLDYDMVLK 251 K G H S+S S++ + +N I H++ D + + Sbjct: 237 EMIISGVGTKTGARMGHMSISGENGSIEALRQVNVGRKIYVHINNTNPVLVDGSKERITA 296 Query: 252 STPSRVVPAFDGMQFSS 268 + + A DGM+ + Sbjct: 297 N-KAGWEIAQDGMEIAL 312 >gi|294626833|ref|ZP_06705425.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598847|gb|EFF42992.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 299 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 104/325 (32%), Gaps = 87/325 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP------TNPKNRRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C T+ RRT++S+ +S ER V++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCH--TCASLRAWQQTDGAQRRTQASIAVSADGERW----VLI 54 Query: 59 DTGPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PDF Q+L + + I+AVL T DHI G+ +R + + ++ Sbjct: 55 NASPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLH 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A+ + L ++ F A VNP + + ++ P G Sbjct: 110 ASSRVLDLLAQNP--IFDA---------VNPHYVSRQPFALDTPLTLCGLQLTPFSVP-G 157 Query: 170 RIS-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 ++ +LG + + Y A +LQ+ + + D Sbjct: 158 KVPLFMESRSGGDLAGSDEETLGLTIDDGRHRMHYIPGCAAMTDALRARLQDAELVFFDG 217 Query: 209 L--------------KNGLHSSHFSL---SESLKKIELINPKNAILTHM--------HVD 243 K G H S+ ++ +N I H+ Sbjct: 218 TLWRDDEMVQLGISQKTGRRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNPVLNTFS 277 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ S A DG++ + Sbjct: 278 PEFASARA---SGWEVAHDGLEIAL 299 >gi|52079508|ref|YP_078299.1| hydrolase [Bacillus licheniformis ATCC 14580] gi|52784873|ref|YP_090702.1| YhfI [Bacillus licheniformis ATCC 14580] gi|52002719|gb|AAU22661.1| putative hydrolase. conserved hypothetical protein [Bacillus licheniformis ATCC 14580] gi|52347375|gb|AAU40009.1| YhfI [Bacillus licheniformis ATCC 14580] Length = 244 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 47/265 (17%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV-LREQVLSI 76 V I G N +S + + + +V++D G ++ L V + Sbjct: 3 VTVIGC-CGGFPAANEA-----TSGYLFQSGD----YSVLIDCGSAVLSKLQLFLPVEEL 52 Query: 77 DAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 DAV+ +H H DHI + L+ + K + +Y P + F L Sbjct: 53 DAVILSHYHHDHIADVGPLQFAKLVGSFLGKGADALPIYGHPFDEEQ--------FSKLT 104 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 +T+ + A G + H + R + V Y D Sbjct: 105 YKTHTAGLA--------YDPTQPLAIGPFTFTFLKTVH-PVDCFAMRVTDGVHSVVYTAD 155 Query: 187 VNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 ++F + + D LI + ++G + H + E+ + +LTH+ Sbjct: 156 -SSFQEAFIPFSEGADLLISECNFYADQDGRSAGHMNSLEAGRIAAEAGAGQLLLTHLPH 214 Query: 243 DLDYDMVLKS----TPSRVVPAFDG 263 ++ +++ VV A G Sbjct: 215 FGEHQKLIEEAQTVYKGAVVLAHTG 239 >gi|330808830|ref|YP_004353292.1| coenzyme PQQ synthesis protein B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376938|gb|AEA68288.1| coenzyme PQQ synthesis protein B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 94/315 (29%), Gaps = 70/315 (22%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ +S V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQAFASMQPGRALRDTGIGAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQHG 169 + L F F L + ++ IE + +P+ H Sbjct: 116 EDLSTGFP-LFNMLTH--WNGGLSWNRIELDQFFTIPACPNLRFTPLPLRSAAPPYSPHR 172 Query: 170 RISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 G G + Y + LE + D L++D Sbjct: 173 FDPHPGDNIGLIVEDLSTGGKLFYAPGLGKIDESLLEIMAGSDCLLVDGTVWDDDEMQRR 232 Query: 210 -------KNGLHSSHFSLSESLKKIELINPK--NAILTHMHVDLDYDMVLKSTPS----- 255 + H + L+ +E + PK +L H++ ++ + +P Sbjct: 233 GVGTRTGREMGHLAQNGPGGMLEVLEHL-PKQQRKVLIHINNTNP--ILDEDSPERAELV 289 Query: 256 --RVVPAFDGMQFSS 268 V A+DGM Sbjct: 290 RRNVEVAYDGMSIEL 304 >gi|154685478|ref|YP_001420639.1| YhfI [Bacillus amyloliquefaciens FZB42] gi|154351329|gb|ABS73408.1| YhfI [Bacillus amyloliquefaciens FZB42] Length = 244 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 92/269 (34%), Gaps = 47/269 (17%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSI 76 V I G N +S + + +++VD G ++ + Sbjct: 3 VTVIGC-CGGFPAANEA-----TSGYL----FQSGGYSLLVDCGSAVLSKLFAYVPAEEL 52 Query: 77 DAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 DAV+ +H H DHI I L+ + K + +Y ++ FE Y Sbjct: 53 DAVILSHYHHDHIADIGPLQFAKQVGSFLGKGTHALPIYGHDADIEQ-FERLTYK-THTK 110 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 Y P D P+ + G + H ++ R + V Y D Sbjct: 111 GVAYQP----------DRPLSL----GPFTITFLKTVH-PVTCYAMRITDGSASVVYTAD 155 Query: 187 VNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 +++ + +N D LI + ++G + H + E+ + + ILTH+ Sbjct: 156 -SSYQDAFIPFAENADLLICECNFYADQDGTSAGHMNSLEAGRIAKEAGAGELILTHLPH 214 Query: 243 DLDYDMVLKSTPS----RVVPAFDGMQFS 267 ++ + + S V A G+++ Sbjct: 215 FGEHRKLKEEAESVFGGEVTIAASGLKWE 243 >gi|331003772|ref|ZP_08327266.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412155|gb|EGG91550.1| hypothetical protein HMPREF0491_02128 [Lachnospiraceae oral taxon 107 str. F0167] Length = 264 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 48/219 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G + + L I + TH H+DHI G++ +K I Sbjct: 20 ENTHILVDAGISNKKIETRLNELGLCGRDISGIFLTHEHSDHIAGLE-----VFVRKNEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA+ +K+L + +Y Y +IE+ G ++ + Sbjct: 75 PVYASEGTLKYLKDRDKY----SKITDY-----FHIIESKR-----HIRLGDLDVLAFDI 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H G+R +A TD+ + + + L NLD L+I+A L+ G + Sbjct: 121 DHDANEPFGYRVESGDKKIAVATDLGRYTKDIVGYLSNLDALLIEANHDIRMLETGPYPY 180 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S S K I I K L H+ Sbjct: 181 ELKRRILSEKGHLSNENSGKLICEILNDRIKKIFLGHLS 219 >gi|291165206|gb|ADD81197.1| PqqB [Pantoea ananatis] gi|327393845|dbj|BAK11267.1| coenzyme PQQ synthesis protein B PqqB [Pantoea ananatis AJ13355] Length = 305 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 100/312 (32%), Gaps = 65/312 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + CD +N RT+SS+ IS E V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCPNCD--GVRNGTLQASPRTQSSIIISDNGEDW----VLCNASP 58 Query: 63 DFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L + +I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQILHTPELVKKGVLRGTAIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L F + PI + P +A ++ P + Sbjct: 114 VHDDLTTGFPVFTMLKHWNGGLQHRPIRPLTPFNVDVCPDLQFTAIPILSNAPPYSPYRD 173 Query: 171 ISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKNG 212 G + Y + A L L+ D L+ID L G Sbjct: 174 RPLPGHNVALFIENRANGQTLLYAPGLGEPDAVILPWLEQADCLLIDGTVWQDDELLTAG 233 Query: 213 LHSS------HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SR 256 + + H +L+E + + + K IL H++ ++ + +P Sbjct: 234 VGKNTGKAMGHLALAEEQGLMALLARLPAKRKILIHINNTNP--VLNEQSPQRQYLTQQG 291 Query: 257 VVPAFDGMQFSS 268 + + DGM Sbjct: 292 IEVSHDGMAIHL 303 >gi|325122190|gb|ADY81713.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter calcoaceticus PHEA-2] Length = 303 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C T RT+SS+ +S V+++ PD Sbjct: 5 VLGSAAGGGFPQWNCNCPNCHGVRTGTIQAKARTQSSIAVSENGTDW----VLLNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I +V+ DH G+ L++ P+ V+ + Sbjct: 61 RQQLFEFKAAQPARKLRDTGITSVILMDSQLDHTTGL-----LTLREGCPMKVWCTEMVL 115 Query: 116 KHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQHGRIS 172 + L F K + +NP D ++ +I+ A P H Sbjct: 116 QDLTSGFPVFNMLKHWNGGLQYNEINPKQAFKIDGFENLEFLPLIIKSAAPPYSPHRHDP 175 Query: 173 SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID--------------A 208 G + Y + + ++ +Q+ D ++ID Sbjct: 176 HDGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQSSDCVMIDGTLWTDDEMQQTGVG 235 Query: 209 LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLD--------YDMVLKSTPSRV 257 K G H +S SL + ++ +L H++ + + + V Sbjct: 236 TKTGREMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNENSSQFAELKA---NGV 292 Query: 258 VPAFDGMQFSS 268 A+DGMQ Sbjct: 293 EVAYDGMQIEL 303 >gi|67924196|ref|ZP_00517637.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] gi|67853950|gb|EAM49268.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] Length = 315 Score = 80.2 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S ++++RG + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSVALKLTQRGEV--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q+LR ++ I + TH H DH++G+ GL +PI++Y P+ +L Sbjct: 42 QHQLLRSDVKISQITRIFVTHMHGDHVYGLAGLLASCGLAGSGQPIEIYGPPELKDYLHA 101 Query: 121 SFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y FK + PI I+ E+ + +H RI + G+R Sbjct: 102 CAKYSHFKLPHHIRFHPIHPGILYEDKE-----------FSVSCGPLKH-RIPAYGYRI 148 >gi|307727421|ref|YP_003910634.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1003] gi|307587946|gb|ADN61343.1| coenzyme PQQ biosynthesis protein B [Burkholderia sp. CCGE1003] Length = 306 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 109/319 (34%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RRT+SS+ +S E ++V+ Sbjct: 1 MKIKVLGSSAGGGFPQWNCNCRNCDGVRRGTLKAKRRTQSSIAVSANGEDW----LLVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I AVL DH+ G+ LR ++ P+ ++A Sbjct: 57 SPDLLTQIAANPELQPARRARDSGIAAVLVIDAQIDHVTGLLMLR----ERDTPLPLHAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI------L 165 + L F A Y + + + + G ++A+P+ Sbjct: 113 DAVWQDLSTGFP---IAPILSHYCGVEHRRIALDGAPLAVDALPGVRVDALPLSSKAPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 H G G + Y + A L ++ D L++D Sbjct: 170 SPHRNAPERGDNIGLVFTNQQNGKRMFYAPGLGAIEEHVLAAMREADLLLVDGTLWTADE 229 Query: 209 -LKNGLHSSHF----SLSES-----LKKIELINPKNA--ILTHMHVDLDYDMVLKSTPS- 255 ++ GL L +S ++ ++ + + +L H++ ++++ +P Sbjct: 230 MIRLGLSRKTAADMGHLQQSGPGGMIEVLDSLGTTDTRKVLIHINNTNP--ILVEDSPER 287 Query: 256 ------RVVPAFDGMQFSS 268 + A DGM F Sbjct: 288 RILAEHGIEVAHDGMSFEL 306 >gi|189461404|ref|ZP_03010189.1| hypothetical protein BACCOP_02059 [Bacteroides coprocola DSM 17136] gi|189431933|gb|EDV00918.1| hypothetical protein BACCOP_02059 [Bacteroides coprocola DSM 17136] Length = 269 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 80/235 (34%), Gaps = 49/235 (20%) Query: 56 VIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + +I AVL TH HADHI + L +K I +Y+ Sbjct: 26 ILIDAGIGIRSIKKIFKDYALNLDTIRAVLITHDHADHIKAVGHLA-----KKHSIPIYS 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P+ + YC D + + N + I ++ H Sbjct: 81 TPEVHAGINR--SYCMTEKLDNAHRRFI------NKEETIQIE----DFSITCFEVPHDA 128 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF-- 218 ++G+ ++ TD+ + ++ ++LI++A L+ G + H Sbjct: 129 TDNVGYCISVGDKTFSFITDIGHITDTAAAYIERSNYLILEANYDETMLQMGPYPQHLKA 188 Query: 219 ----------SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 + + E K L H+ D ++ + T V AF Sbjct: 189 RIASPNGHMSNSEMANYLAEHFPAGLKYLWLCHLSKDNNHPELAYKT---VETAF 240 >gi|289667029|ref|ZP_06488104.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 299 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 106/317 (33%), Gaps = 71/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG A G P+ A + RRT++S+ +S R V+++ Sbjct: 1 MHIIVLGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADDARW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHLPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFES--FR-----YCFKALDDRTYPPIVNPIVIENNDVP-----ICMKSAGGVI 159 + L ++ F Y + P ++ + + VP +GG + Sbjct: 112 SRVLDLLAQNPIFDAVSPQYVSRQPFALDTPLALSGLQLTPFSVPGKVPLFMESRSGGDL 171 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 +LG + + Y A E +LQ + + D Sbjct: 172 AG-------SNEETLGLTIDDGRHRMHYIPGCAAMTDELRARLQGAELVFFDGTLWRDDE 224 Query: 210 --------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 225 MVQLGISQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNP--VLNTQSPEFAS 282 Query: 256 ----RVVPAFDGMQFSS 268 A DG++ + Sbjct: 283 ARASGWEVAHDGLEIAL 299 >gi|1093033|prf||2102316B pqqG gene Length = 223 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 37/229 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A GVP+ C + + R RT+SS+ +S ER ++++ Sbjct: 1 MHVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGERW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ RE + I AVL T+ DH+ G+ L++ +P +YA Sbjct: 57 SPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGL-----LTLREGQPFTLYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVI 159 P + + ++ F + R P + + VP+ ++ A I Sbjct: 112 PGILASVSDNRVFDVMAADVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEI 171 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 A G + G + +AY + ++ D L+ D Sbjct: 172 GAE-TETTVGTMIEAGGK--RLAYIPGCARVTEDLKARIAGADALLFDG 217 >gi|108804069|ref|YP_644006.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108765312|gb|ABG04194.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 251 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 75/248 (30%), Gaps = 40/248 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V+ ++ D G +LR + + D V TH H DH L Sbjct: 20 SCVAAEWGGELLVFDLGSGALRGMLRAGLDPLEADRVFVTHFHPDHTV---DLAALLFSV 76 Query: 103 KRPIDVYAAPDCMKH-LFESFRYCFKALDDRTYPPIVNPI------VIENNDVPICMKSA 155 + Y + L F A + I V E ++ Sbjct: 77 R-----YGSEIPRDRPLRVCGPEPFAAFWESLCRVWGEWISGDYLEVAELERGGGRLELP 131 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 GG + P+L R S+G+R G Y D + +E + L+ + Sbjct: 132 GGTLSWGPVLH---RPESVGYRLSGERGAFVYTGDTSC-GEPVVELARGAHTLLAECSFP 187 Query: 212 GLHS--SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS---------RVVPA 260 H + S + + +LTH++ +D P VV A Sbjct: 188 DETPVEGHLTPSGAAAIAREAGVRRLVLTHLYPQVD----TPELPDLVRKAGFGGEVVVA 243 Query: 261 FDGMQFSS 268 DG+ F Sbjct: 244 RDGLSFEV 251 >gi|159903944|ref|YP_001551288.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9211] gi|159889120|gb|ABX09334.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. MIT 9211] Length = 327 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 95/340 (27%), Gaps = 99/340 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 8 LQITFLGT--SSGVPT---------------RSRNVSALALRLPQRSEL--WLFDCGEGT 48 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + + TH H DHI+G+ GL ID+Y +L Sbjct: 49 QHQFLRSDLRTSQLRRIFITHMHGDHIYGLPGLLASLGLAGNSSGIDLYGPNPLSNYLNG 108 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 + + +YP ++ + D I + ++ P++ RI + + Sbjct: 109 VLK---SSSSRISYPFQIHSVEKVAEDNQIVFEDKDFIVRCKPLIH---RIPAFAYRVDQ 162 Query: 177 -----RFG---------------------------------------------NVAYCTD 186 RF ++ YCTD Sbjct: 163 KPRPGRFNLEKAKAFNIPPGPVFAKLKLGQQVRLEDGRIINGKDFCGPQKAGKSIVYCTD 222 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 F +++ + D LI ++ H + + + + +LTH+ Sbjct: 223 TI-FSKAAIQLAKGADLLIHESTFADKDTDMAFQRKHSTSRMAAQTAKEAGVGKLVLTHL 281 Query: 241 HVDL---------DYDMVLKSTPSRVVPAFDGMQFSSPIP 271 D K + A D MQ P Sbjct: 282 SPRYAPGNAFSPNDLLKEAKEIFPNTLLAKDFMQIDIEKP 321 >gi|255099804|ref|ZP_05328781.1| hypothetical protein CdifQCD-6_03298 [Clostridium difficile QCD-63q42] Length = 273 Score = 79.8 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 102/286 (35%), Gaps = 39/286 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I+G G +P C+ K R R SL I + +++DT Sbjct: 1 MKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYI-------DDIKMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR----GYFLKQKRPIDVYAAPDCMKH 117 D + R+++ + + +H DH+ GI + + + PI YA P+ ++ Sbjct: 54 EDIAVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIED 113 Query: 118 LFESFRYCFKALDDRTYPPIVNP---IVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + C K D +N + I N D+ + + I I + ++ Sbjct: 114 INRTNLDCLKYYGDVINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEKKVIYA 173 Query: 175 G-----FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSH-FSLSESLK 225 F ++ + TDV S D I++ LK+ F+L E ++ Sbjct: 174 CCNPKPFTHSDMYFDTDVLIISLVS-------DDGILNDGTKLKDTPFKDEIFTLDEIVE 226 Query: 226 KIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 K I+TH+ Y + K + A+DGM+ Sbjct: 227 IKNYYRIKKIIITHIDEMWGKSYGYYSELEKKL-DNIYFAYDGMEI 271 >gi|118468995|ref|YP_888024.1| pyrroloquinoline quinone biosynthesis protein PqqB [Mycobacterium smegmatis str. MC2 155] gi|118170282|gb|ABK71178.1| coenzyme PQQ biosynthesis protein B [Mycobacterium smegmatis str. MC2 155] Length = 300 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 109/312 (34%), Gaps = 68/312 (21%) Query: 9 ILGCGASLGVPRITGDWGACDP----TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C P R++SS+ +S ++ + + PD Sbjct: 5 VLGSAAGGGFPQWNCGCPQCRAVRTGARPCVARSQSSIAVSADRKQW----FLFNASPDI 60 Query: 65 YMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+ +V+ + AVL T DH G+ +++ R ++V+A + Sbjct: 61 QSQIEAFPDLHPDEGRVVRLQAVLLTDAELDHTLGL-----LLMREGRGLEVHATESVHE 115 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----------IPILQ 166 L Y P+ V+ +VP+ S G A P Sbjct: 116 TLTTG---TGVLRTLEAYCPVKWQPVVPGVEVPLDDGSHGLSYRAFDVPTDKSMRFPGAA 172 Query: 167 QHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIID--ALKNGLHS--- 215 HGR+ +G+R + + Y V E LE+L + L+ID ++ Sbjct: 173 THGRV--VGYRLTDAGSGRSLVYLPCVQRLTPEVLEELADCSGLLIDGTCWRDDEMPRLG 230 Query: 216 ---------SHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------R 256 H ++ + L+ + + + H++ ++L+ +P Sbjct: 231 LAGKTSREMGHVPIAGAGGSLELLASLPIDRKVYIHINNTNP--VLLEDSPERRILDRHG 288 Query: 257 VVPAFDGMQFSS 268 + A DG++ Sbjct: 289 IEVAADGLELEI 300 >gi|308173004|ref|YP_003919709.1| metal-dependent hydrolase [Bacillus amyloliquefaciens DSM 7] gi|307605868|emb|CBI42239.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens DSM 7] gi|328552650|gb|AEB23142.1| metal-dependent hydrolase [Bacillus amyloliquefaciens TA208] gi|328911058|gb|AEB62654.1| putative metal-dependent hydrolase [Bacillus amyloliquefaciens LL3] Length = 244 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 90/269 (33%), Gaps = 47/269 (17%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSI 76 V I G N +S + + +++VD G ++ + Sbjct: 3 VTVIGC-CGGFPAANEA-----TSGYL----FQSGGYSLLVDCGSAVLSKLFAYVPAEEL 52 Query: 77 DAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 DAV+ +H H DHI I L+ + K + +Y ++ FE Y Sbjct: 53 DAVILSHYHHDHIADIGPLQFAKQVGSFLGKGTDALPIYGHDADIEQ-FERLTYK-THTK 110 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 Y P + G + H ++ R + V Y D Sbjct: 111 GVAYQP--------------DRPLSAGPFTITFLKTVH-PVTCYAMRITDGTATVVYTAD 155 Query: 187 VNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 +++ + +N D LI + ++G + H + +E+ + ILTH+ Sbjct: 156 -SSYQDAFIPFAENADLLICECNFYAHQDGAPAGHMNSTEAGRIAREAGAGELILTHLPH 214 Query: 243 DLDYDMVLKSTPS----RVVPAFDGMQFS 267 ++ + + S +V A G+++ Sbjct: 215 FGEHLKLKEEAESVFGGKVTIAASGLKWE 243 >gi|219122100|ref|XP_002181391.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407377|gb|EEC47314.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 748 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 98/290 (33%), Gaps = 59/290 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 G G++ +P C + S + ++++D G Sbjct: 442 ELFFTGTGSA--IP--------C-------KHRNVSGI---CLTSPNGNSILLDVGEGTV 481 Query: 66 MQVLREQ-------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMK 116 Q+LR + I AV +HPHADH GI L +K P + + Sbjct: 482 GQLLRANSGPTSSTLAHIKAVWISHPHADHHLGILRLL---HDRKAPDPLLLMCPSPIIS 538 Query: 117 HLFESFRYC-FKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGR---- 170 L E YC + Y + N ++ EN +K A G+ + + H Sbjct: 539 FLTE---YCSMDSDLSSAYVAVNCNDLIRENAKASFLLKEALGIDSSFAVPVTHCPYSFG 595 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNG------LHSSHFSLSES 223 + G FG + Y D P+ L K D LI +A H ++ E+ Sbjct: 596 LILEGTCFGKLVYSGDCR--PSSQLAKCALGADLLIHEATFEDGMEVEAALKRHSTIGEA 653 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR------VVPAFDGMQFS 267 L + K +LTH + TP V+ AFD M+ S Sbjct: 654 LSVGMEMKAKCVVLTHFSQRYPK---VPPTPVNHEGSIPVIFAFDFMRLS 700 >gi|218530229|ref|YP_002421045.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|218522532|gb|ACK83117.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] Length = 243 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 84/274 (30%), Gaps = 41/274 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G R + + ++D G Sbjct: 1 MRLHVLGCGDAFG----------------SGGRFNTCFHVDAPG-----GAFLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 + + R V I V TH H DH G+ L + P+ V P + L Sbjct: 40 LIAIRRFGVEPNRIRTVFLTHLHGDHFGGLPWLILDGQLVSGRTEPLTVVGPPGTAERLP 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F + P+ + + +++ G A + G + R Sbjct: 100 AAMEVLF---PGSSTAERRFPVEVLEMEAGRPVETGGVRASAFTMRHPSGA-PAHALRIE 155 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 V+Y D + + D +I + H + +++ I PK Sbjct: 156 AAGKVVSYTGDTEWV-EDIVAAGSGADLMIAEGYTVERPVKFHLDWATLKRRLPEIAPKR 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTHM ++ + P + A DG+ + Sbjct: 215 LMLTHMSPEM-----IAHPPDGYIAAEDGLVLAL 243 >gi|291617407|ref|YP_003520149.1| PqqB [Pantoea ananatis LMG 20103] gi|291152437|gb|ADD77021.1| PqqB [Pantoea ananatis LMG 20103] Length = 321 Score = 79.4 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 100/312 (32%), Gaps = 65/312 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + CD +N RT+SS+ IS E V+ + P Sbjct: 21 VLGSAAGGGFPQWNCNCPNCD--GVRNGTLQASPRTQSSIIISDNGEDW----VLCNASP 74 Query: 63 DFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L + +I ++ T DH G+ LR Q V+ P+ Sbjct: 75 DISQQILHTPELVKKGVLRGTAIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 129 Query: 114 CMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L F + PI + P +A ++ P + Sbjct: 130 VHDDLTTGFPVFTMLKHWNGGLQHRPIRPLTPFNVDVCPDLQFTAIPILSNAPPYSPYRD 189 Query: 171 ISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKNG 212 G + Y + A L L+ D L+ID L G Sbjct: 190 RPLPGHNVALFIENRANGQTLLYAPGLGEPDAVILPWLEQADCLLIDGTVWQDDELLTAG 249 Query: 213 LHSS------HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SR 256 + + H +L+E + + + K IL H++ ++ + +P Sbjct: 250 VGKNTGKAMGHLALAEEQGLMALLARLPAKRKILIHINNTNP--VLNEQSPQRQYLTQQG 307 Query: 257 VVPAFDGMQFSS 268 + + DGM Sbjct: 308 IEVSHDGMAIHL 319 >gi|294667038|ref|ZP_06732265.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603195|gb|EFF46619.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 104/325 (32%), Gaps = 87/325 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP------TNPKNRRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C T+ RRT++S+ +S ER V++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCH--TCASLRAWQQTDGAQRRTQASIAVSADGERW----VLI 54 Query: 59 DTGPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PDF Q+L + + I+AVL T DHI G+ +R + + ++ Sbjct: 55 NASPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLH 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A+ + L ++ F A VNP + + ++ P G Sbjct: 110 ASSRVLDLLAQNP--IFDA---------VNPHYVSRQPFALDTPLTLCGLQLTPFSVP-G 157 Query: 170 RIS-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 ++ +LG + + Y A +LQ+ + + D Sbjct: 158 KVPLFMESRSGGDLAGSDEETLGLTIDDGRHRMHYIPGCAAMTDALRARLQDAELVFFDG 217 Query: 209 L--------------KNGLHSSHFSL---SESLKKIELINPKNAILTHM--------HVD 243 K G H S+ ++ +N I H+ Sbjct: 218 TLWRDDEMVQLGISQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNPVLNTFS 277 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ S A DG++ + Sbjct: 278 PEFASARA---SGWEVAHDGLEIAL 299 >gi|284050929|ref|ZP_06381139.1| ribonuclease Z [Arthrospira platensis str. Paraca] gi|291570269|dbj|BAI92541.1| ribonuclease Z [Arthrospira platensis NIES-39] Length = 316 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 94/328 (28%), Gaps = 84/328 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q LR +V + + TH H DHI G+ GL ID+Y P+ +L Sbjct: 42 QHQFLRSELKVSQLSRIFITHMHGDHIFGLMGLLATCGLAGNANRIDIYGPPELEDYLKS 101 Query: 121 -----------------------------------------SFRYCFKALDDRTYPPIVN 139 +F Y + D + Sbjct: 102 CTRYSQTHFSYPVKVHRVKPGIIYEDEEYIVSCGPLKHRVPAFGYRIEEKDRPGRFYVEK 161 Query: 140 PIVIENNDVPICMKSAGGVIEAIP-ILQQHGRISSLGFRFGN-VAYCTDVNAFPAESLEK 197 + PI K G I +P Q +G G YCTD ++E Sbjct: 162 AQALGIPPGPIYGKLKNGEIVTLPDGRQINGSALCGKPEIGRKFVYCTDTV-LCDGAIEL 220 Query: 198 LQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH------VDL 244 D LI +DA H + + + + K ++TH D+ Sbjct: 221 ADGADVLIHEATFSHLDA-DMAFQRLHSTSTMAAQVALAAGVKTLLMTHFSPRYAPGNDI 279 Query: 245 DYDMVLKSTP---SRVVPAFDGMQFSSP 269 + +LK A+D M + P Sbjct: 280 VLEDLLKEARAIFPNTKMAYDFMSYDIP 307 >gi|325297860|ref|YP_004257777.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317413|gb|ADY35304.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 296 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 76/238 (31%), Gaps = 49/238 (20%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++++D G + + + A+L TH HADHI + L +K I Sbjct: 50 DTYSILIDAGVGIRSIKKTFKDYNLNIQELKAILITHDHADHIKAVG-----NLAKKYNI 104 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + K + YC + + PI + G Sbjct: 105 PVYTTQEIHKGMQR--SYCMTEKLS------AEHTCLLYKETPIQL----GDFNVTCFEV 152 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H ++G+ A+ TD+ + + ++LI++A L+ G + Sbjct: 153 PHDGTDNVGYFIEADNKTFAFLTDMGHITPTAATYISRANYLILEANYDDEMLQMGPYPP 212 Query: 217 HF------------SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKSTPSRVVPA 260 H + + E P K L H+ D ++ + T V A Sbjct: 213 HLKVRIAGANGHMSNRDTAQFLAEHFPPDLKYLWLCHLSKDNNHPELAYKT---VELA 267 >gi|295399067|ref|ZP_06809049.1| ribonuclease Z [Geobacillus thermoglucosidasius C56-YS93] gi|294978533|gb|EFG54129.1| ribonuclease Z [Geobacillus thermoglucosidasius C56-YS93] Length = 348 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 102/317 (32%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 2 LELLFLGTGA--GVP-----------AKERNV---SSVALQLLEERGA--TWLFDCGEAT 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L + I+ + TH H DHI G+ GL G Q P+ VY + Sbjct: 44 QHQILHTSIRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGETPLTVYGPKGIQTFIET 103 Query: 120 ------ESFRYCFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 +Y + ++ + ++ + + S G + + +P + Sbjct: 104 SLSVSSTRLKYDLQIVEIEEGIIFEDERFLVTAKQLDHGILSYGFRVVEKDLPGTLLVDK 163 Query: 171 ISSLGFRFGNV---------------------------------AYCTDVNAFPAESLEK 197 + +LG R G + A D + S+E Sbjct: 164 LQALGIRPGPIYQQIKLGKMVQLEDGTVIDGRHFVGPPQKGRIVAILGDT-RYCEASVEL 222 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 D L+ +A S+ H + +++ + + K ILTH+ ++ K Sbjct: 223 AAEADVLVHEATFAREDSALAHDYFHSTTAQAAEVAKRARAKKLILTHISSRYQGELSEK 282 Query: 252 STPS------RVVPAFD 262 AFD Sbjct: 283 LLYEARELFPNTELAFD 299 >gi|197121970|ref|YP_002133921.1| ribonuclease Z [Anaeromyxobacter sp. K] gi|196171819|gb|ACG72792.1| Ribonuclease Z [Anaeromyxobacter sp. K] Length = 323 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 88/267 (32%), Gaps = 54/267 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T+LG G P P+ R S + R ++ D G Sbjct: 25 QEFRVTLLGTG---------------RPA-PEIDRFGPSTLVEAGGHR-----LLFDAGR 63 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR-------GYFLKQKRPIDVYAAPD 113 ++ LR + IDAV TH H+DH+ GI L + + P+ ++ Sbjct: 64 GVTQRLWQLRMPLRDIDAVFLTHLHSDHVVGIPDLWLTGWLPTPFGRRV-VPLALWGPAG 122 Query: 114 CMK---HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L ++ + +A P + DV + ++ HG Sbjct: 123 TVDMVAALRRAYAWDLRARSGHQQLP-DAGATVRARDVGQGVVYERDGVKVTAFTVDHGP 181 Query: 171 --ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI----------ID--ALKNG 212 +LG+R +V D + D L+ +D A+ Sbjct: 182 HLRPALGYRVDHAGRSVVISGDTRPC-ENLVRFAAGADVLVHEVAAARKELVDRSAVARS 240 Query: 213 LHSSHFSLSESLKKIELINPKNAILTH 239 + + H S ++ + + P+ A+ TH Sbjct: 241 ILAVHTSPEDAGRVFTRVKPRLAVFTH 267 >gi|209525382|ref|ZP_03273923.1| ribonuclease Z [Arthrospira maxima CS-328] gi|209494233|gb|EDZ94547.1| ribonuclease Z [Arthrospira maxima CS-328] Length = 316 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 95/328 (28%), Gaps = 84/328 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q LR +V + + TH H DHI G+ GL ID+Y P+ +L Sbjct: 42 QHQFLRSELKVSQLSRIFITHMHGDHIFGLMGLLATCGLAGNANRIDIYGPPELEDYLKS 101 Query: 121 -----------------------------------------SFRYCFKALDDRTYPPIVN 139 +F Y + D + Sbjct: 102 CTRYSQTHFSYPVKVHRVKPGIIYEDEEYIVRCGPLKHRVPAFGYRIEEKDRPGRFYVEK 161 Query: 140 PIVIENNDVPICMKSAGGVIEAIP-ILQQHGRISSLGFRFGN-VAYCTDVNAFPAESLEK 197 + PI K G I +P Q +G G + YCTD ++E Sbjct: 162 AQALGIPPGPIYGKLKNGEIVTLPDGRQINGSALCGKPEIGRKLVYCTDTV-LCEGAIEL 220 Query: 198 LQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH------VDL 244 D LI +DA H + + + + K ++TH D+ Sbjct: 221 STGADVLIHEATFSHLDA-DMAFQRLHSTSTMAAQVALAAGVKTLLMTHFSPRYAPGNDI 279 Query: 245 DYDMVLKSTP---SRVVPAFDGMQFSSP 269 + +LK A+D M + P Sbjct: 280 VLEDLLKEARAIFPHTKMAYDFMSYEIP 307 >gi|220920044|ref|YP_002495346.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] gi|219952874|gb|ACL63263.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 243 Score = 79.4 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 85/269 (31%), Gaps = 41/269 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G R + ++ + T ++D G Sbjct: 1 MEVRVLGCGDAFG----------------SGGRFNTCFHVTTPA-----TRFLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 + + R V +I V TH H DH G+ L ++ P+ + + L Sbjct: 40 LIAMRRFGVEPNAIQTVFLTHLHGDHFGGLPFLILDAQLVSRRTAPLTIVGPSTLRERLA 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F T + +IE + + + G + A P+ G S R Sbjct: 100 ALMEAMF--PGSSTVERRFDLRLIE-LEPEMPTEVDGVTVTAFPVRHPSGA-PSYALRLA 155 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 + Y D + +D LI +A H + K + + K+ Sbjct: 156 CEGRTLCYTGDTEWV-DALYPAGREVDLLIAEAYTAERPVRYHLDWATLRKHLPAMTAKS 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 +LTHM D+ L P A DG Sbjct: 215 VLLTHMGPDM-----LNRIPEGCTAAEDG 238 >gi|21243841|ref|NP_643423.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas axonopodis pv. citri str. 306] gi|32129903|sp|Q8PHY4|PQQB_XANAC RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|21109439|gb|AAM37959.1| pyrroloquinoline quinone biosynthesis protein G [Xanthomonas axonopodis pv. citri str. 306] Length = 299 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 106/322 (32%), Gaps = 81/322 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTSASLRAWQQTDGAQRRTQASIAVSADGERW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIVGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ F A VNP + + A ++ P G++ Sbjct: 112 SRVLDLLAQNP--IFDA---------VNPHYVSRQPFALDTPLALCGLQLTPFSVP-GKV 159 Query: 172 S-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 +LG + + Y A +LQ+ + + D Sbjct: 160 PLFMESRSGGDLAGSNEETLGLTIDDGRRRMHYIPGCAAMTDALRARLQDAELVFFDGTL 219 Query: 210 -------------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 K G H S+ ++ +N I H++ ++ + Sbjct: 220 WRDDEMVQLGISQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNP--VLNTLS 277 Query: 254 PS-------RVVPAFDGMQFSS 268 P A DG++ + Sbjct: 278 PEFASARASGWEVAHDGLEIAL 299 >gi|322368855|ref|ZP_08043422.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] gi|320551586|gb|EFW93233.1| beta-lactamase domain protein [Haladaptatus paucihalophilus DX253] Length = 244 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 90/270 (33%), Gaps = 50/270 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R ++ + + V+VD G Sbjct: 1 MRITFLGTGSAM----------------PTGSRFQTGIVVE-----DDGRRVLVDCGSGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFES 121 ++ + V ++ VL TH H DH+ + L ++V + Sbjct: 40 LHRLQQSGVGYENVSTVLLTHHHVDHVSDLMALLKARWLAGEEQLEVVGPTGTKAFIEGL 99 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 LD R + ++ +V + + + +H + L +RFG+ Sbjct: 100 LS-VHDYLDGR--------VDLQVREVVPGEEFSVADFDVEGFETRHS-MDCLAYRFGDA 149 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELINPKNA 235 + D AF D L+ D H + L E+L ++ Sbjct: 150 FTFSGDSEAF-EGLANFADGSDVLVHDCSFPDEVDVSNHPTPSQLGEALSGTDI---GRV 205 Query: 236 ILTHM--HVDLDYDMVLKSTPSRVVPAFDG 263 LTH+ H D +++ +LKS +DG Sbjct: 206 YLTHLYPHTDGNHEAMLKSIAEH----YDG 231 >gi|227494819|ref|ZP_03925135.1| beta-lactamase superfamily hydrolase [Actinomyces coleocanis DSM 15436] gi|226831271|gb|EEH63654.1| beta-lactamase superfamily hydrolase [Actinomyces coleocanis DSM 15436] Length = 265 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 91/238 (38%), Gaps = 32/238 (13%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I + V+ D GP + Q+ R IDAV+++H HADH+ + + + Sbjct: 29 IDPETGLDRVYNVVFDLGPGSFGQLWRYVDPRKIDAVIFSHLHADHMG---DVISLHVHR 85 Query: 103 KRPIDVYAAPDCM---KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + +L + R A + Y P+++E+ + G + Sbjct: 86 RWHPQGNLGQVTLGGPSNLLDRVRGIDGADESEDYAAEFAPLILEDG-----VSFNVGPL 140 Query: 160 EAIPILQQHGRISSLGFRFGN-----------VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + P H + S GFR +AY D + +E + ++ L+ +A Sbjct: 141 KITPYAAWH-TVESYGFRVEGPSEGDAAKCVTIAYTGDT-DYCERMVEMAEGVELLLSEA 198 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + + H + + + + K+ +LTH+ D ++VL+ A+DG Sbjct: 199 GFTAADEVRGIHLTGERAAQLAKTAQAKSMVLTHIQAWTDSEVVLREA----RLAWDG 252 >gi|293396115|ref|ZP_06640395.1| coenzyme PQQ biosynthesis protein B [Serratia odorifera DSM 4582] gi|291421248|gb|EFE94497.1| coenzyme PQQ biosynthesis protein B [Serratia odorifera DSM 4582] Length = 303 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 94/311 (30%), Gaps = 55/311 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + RT+SS+ IS + D Sbjct: 1 MQIKVLGSAAGGGFPQWNCNCKNCQGVRNNTIKTSARTQSSIAISDDGKNWVLCNASPDI 60 Query: 61 GPDFYMQVLREQV-----LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 I A++ T DH G+ LR Q V+ + Sbjct: 61 CHQLRASPELNNPEVLRGTGIGAIILTDSQIDHSAGLLNLREGCPHQ-----VWCTREVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L F F L + + IE + A AIP+L S Sbjct: 116 DDLSTGFP-VFPML--SHWNGGLIHRPIEPLEAFQVAVCATLRFTAIPLLSNAPPYSLYR 172 Query: 176 FR----------FGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSS- 216 R ++A Y + + L L+ D L+ID ++ ++ Sbjct: 173 HRPLPGHNVALFIEDIARGSSLLYAPGLGEPDEQLLPWLKRADCLLIDGTLWRDNELANT 232 Query: 217 -----------HFSLSESLKKIELIN---PKNAILTHMHVD---LDYDMVLKS--TPSRV 257 H +L E L+ K IL H++ LD D + T + + Sbjct: 233 GVGRNTGKDMGHLALGEDQGLAALLTTLPAKRKILIHINNTNPILDEDSAERHSLTQAGI 292 Query: 258 VPAFDGMQFSS 268 ++DGM Sbjct: 293 EVSWDGMNIEL 303 >gi|282165506|ref|YP_003357891.1| ribonuclease Z [Methanocella paludicola SANAE] gi|282157820|dbj|BAI62908.1| ribonuclease Z [Methanocella paludicola SANAE] Length = 304 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 95/323 (29%), Gaps = 79/323 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G S VP C R SL + R ER ++ D G Sbjct: 2 LKVIFLGTGGS--VPSP------C--------RGMPSLMVVREGER-----MLFDCGEGT 40 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKH--- 117 Q++ R + + ++ TH HADH GI GL Q R P+ +Y ++ Sbjct: 41 QRQMMCCRSGFMDVGSIFLTHFHADHTLGIPGLIQTMGFQGRTEPLHIYGPKFVREYCDI 100 Query: 118 ----------------------LFESFRYCFKALDDRTYPPIVNPIVIEN---NDVPICM 152 + E Y +A P + ++E+ Sbjct: 101 LNSLGYLKPAFDVVAHELRHGDVVERNGYKVEAFRTFHSVPGLGYALMEDARLGRFDRQR 160 Query: 153 KSAGGVIEAIPILQQH--------GRISSLGFRFG------NVAYCTDVNAFPAESLEKL 198 GV E + H G I G + Y D L L Sbjct: 161 ALELGVPEGPLFGRLHRGEDVEVKGSIIKSSDVVGEPRPGRRIVYTGDTAP-SQAFLPVL 219 Query: 199 QNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV--- 249 + D I +A + H S + + + ILTH+ D+ Sbjct: 220 KGADLWISEATFADEASDKAAETLHSSSGDVARLAATAGVQRLILTHISSRYSEDITPLL 279 Query: 250 --LKSTPSRVVPAFDGMQFSSPI 270 + VV A D M+ P+ Sbjct: 280 EDARKYFPGVVVAEDFMEVDVPL 302 >gi|326330806|ref|ZP_08197107.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Nocardioidaceae bacterium Broad-1] gi|325951336|gb|EGD43375.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Nocardioidaceae bacterium Broad-1] Length = 256 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 87/278 (31%), Gaps = 50/278 (17%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M TI+GC S D A S + G +++D Sbjct: 1 MTSGMRLTIIGCSGSY----PGPDSPA------------SCYLVEADDSEGRTWRIVLDM 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------KRPIDVYAAPD 113 G + R L IDAVL +H HADH +D Y L++ + PI VY Sbjct: 45 GNGALGVLQRYVDPLLIDAVLLSHLHADHC--VDMTSYYVLRKWHPTGPQPPIPVYGPKG 102 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L +++ P + E G P +H + + Sbjct: 103 TGRRLAKAYD-----------LPKRPGMREEFAFSTYTGPIHLGPFVITPTAVEH-PVDA 150 Query: 174 LGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLK 225 G R +AY D L+ D + +A H + + + Sbjct: 151 YGLRIEAHGKVIAYSGDTAE-TEALLDIATEADLFLCEAAFRDGVENPPGVHITGVHAGE 209 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + K ++TH+ D L+ S A+DG Sbjct: 210 YATKAHVKKLVITHVPPWHDSADALREARS----AYDG 243 >gi|294782631|ref|ZP_06747957.1| metal dependent hydrolase [Fusobacterium sp. 1_1_41FAA] gi|294481272|gb|EFG29047.1| metal dependent hydrolase [Fusobacterium sp. 1_1_41FAA] Length = 259 Score = 79.0 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 89/232 (38%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++++ +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEMIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + + ++ +I+ D + ++ P Sbjct: 75 PIYITPESYRA-------------GASKLGEIDKSLIKFIDGSFILDD---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLESQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCSYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + + H S +E K I+ + K L H+ D ++ ++K T Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKDSNHLSIIKET 230 >gi|327400955|ref|YP_004341794.1| Ribonuclease Z [Archaeoglobus veneficus SNP6] gi|327316463|gb|AEA47079.1| Ribonuclease Z [Archaeoglobus veneficus SNP6] Length = 303 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 97/301 (32%), Gaps = 100/301 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S +P + R S++ + S R ++ D G Sbjct: 3 LKITFLGT--SGTIPSV--------------ERNPSAVFVRHGSHR-----ILFDCGEGT 41 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA-PDCMKHLFE 120 Q++ + +DA+ TH H DH G+ GL +++ + +Y+ + LF+ Sbjct: 42 QRQMMIAKTGFKLDAIFITHLHTDHFIGLFGLLETMSLNERREKLAIYSPNARFLASLFK 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 +F Y D+ +YP IE ++ + + + H + SLG+ Sbjct: 102 AFGY-----DELSYP-------IEVVELRDGDEVKFDGFKVVAFKTDH-IVPSLGYALIE 148 Query: 177 --RFGNV-----------------------------------------------AYCTDV 187 R G Y D Sbjct: 149 KDRPGKFYREKAEALGIPPGPLYAKLVKGESVVVGGKVITPEMVVGKPRPGRKIVYTGDT 208 Query: 188 NAFP-AESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHM 240 P ++E ++ D LI DA L+ + H + E+ + + K +LTH+ Sbjct: 209 R--PCERTIEIARSADVLIHDAAFTSDLQEWAEETKHSTAREAAEVAKAAGVKKLVLTHV 266 Query: 241 H 241 Sbjct: 267 S 267 >gi|312110329|ref|YP_003988645.1| ribonuclease Z [Geobacillus sp. Y4.1MC1] gi|311215430|gb|ADP74034.1| ribonuclease Z [Geobacillus sp. Y4.1MC1] Length = 309 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 103/319 (32%), Gaps = 82/319 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 2 LELLFLGTGA--GVP-----------AKERNV---SSVALQLLEERGA--TWLFDCGEAT 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L + I+ + TH H DHI G+ GL G Q P+ VY + Sbjct: 44 QHQILHTSIRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGETPLTVYGPKGIQAFIET 103 Query: 120 ------ESFRYCFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 +Y + ++ + ++ + + S G + + +P + Sbjct: 104 SLSVSSTRLKYDLQIVEIEEGIIFEDERFLVTAKQLDHGILSYGFRVVEKDLPGTLLVDK 163 Query: 171 ISSLGFRFGNV---------------------------------AYCTDVNAFPAESLEK 197 + +LG R G + A D + S+E Sbjct: 164 LQALGIRPGPIYQQIKLGKMVQLEDGTVIDGRHFVGPPQKGRIVAILGDT-RYCEASVEL 222 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVD-------- 243 D L+ +A S+ H + +++ + + K ILTH+ Sbjct: 223 AAEADVLVHEATFAREDSALAHDYFHSTTAQAAEVAKRARAKKLILTHISSRYQGELSEK 282 Query: 244 LDYDMVLKSTPSRVVPAFD 262 L ++ + AFD Sbjct: 283 LLHE--ARELFPNTELAFD 299 >gi|323138275|ref|ZP_08073347.1| coenzyme PQQ biosynthesis protein B [Methylocystis sp. ATCC 49242] gi|322396527|gb|EFX99056.1| coenzyme PQQ biosynthesis protein B [Methylocystis sp. ATCC 49242] Length = 348 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 71/205 (34%), Gaps = 49/205 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G P+ + C RRT+SSL +S V+++ Sbjct: 40 MRIRILGSGAGGGFPQWNCNCANCRAVRDGVAGYVRRTQSSLAVSADGANW----VLLNA 95 Query: 61 GPDFYMQVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ + I AV T+ DH+ G+ L++ +P VY Sbjct: 96 SPDLREQIAAAPELSPRHDDPLRASPIKAVALTNGDVDHVAGL-----LNLREAQPFSVY 150 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA----GGVIEAIPIL 165 AA + L + P + P + D PI + A G I A P+ Sbjct: 151 AAQRVLDALKAN-------PIFSILQPALVPRIELQMDQPIALSGAGVDLGLSIRAFPVP 203 Query: 166 QQHGRISSLGFRFGNVA-YCTDVNA 189 G +A Y D NA Sbjct: 204 -------------GKIALYLEDANA 215 >gi|315651190|ref|ZP_07904220.1| ribonuclease Z [Eubacterium saburreum DSM 3986] gi|315486486|gb|EFU76838.1| ribonuclease Z [Eubacterium saburreum DSM 3986] Length = 303 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 90/285 (31%), Gaps = 64/285 (22%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYF 99 ++ + R +++D G + ++E+ ID + +TH HADHI G+ G Sbjct: 19 WLTSMMARCEGVNLLIDCGEGTQI-AIKEKGWSPKPIDVICFTHYHADHISGLP---GLL 74 Query: 100 LKQKRP--------IDVYAAPDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENN 146 L I + + F F+ L + P IE Sbjct: 75 LTMGNCEKTTPLLVIGPKGLERVVNAMRVIAPELPFEIQFRELRESEEVIDFAPYKIEAY 134 Query: 147 DVPICMKSAGGVIEA---------------IPIL----QQHGRISSLGF----------- 176 V + G I IP+ QHG I G Sbjct: 135 KVNHRVTCYGYRISIERKGKFDAERAKALDIPLKYWNKLQHGEIIIDGDKTYTPDMVMGE 194 Query: 177 --RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKI 227 R V YCTD P E + D I + + +N H +++E+ Sbjct: 195 ARRGIKVNYCTDTRPEP-VIAEYAADCDLFICEGMYGEDDKEENAKGYKHMTMTEAANLG 253 Query: 228 ELINPKNAILTH----MHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + NPK LTH M+ +Y LK + A DG Sbjct: 254 KEANPKRMWLTHYSPSMNKPDEYIEGLKKIFPAIRTARDGWSIEL 298 >gi|220925819|ref|YP_002501121.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium nodulans ORS 2060] gi|254782808|sp|B8ITW0|PQQB_METNO RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|219950426|gb|ACL60818.1| coenzyme PQQ biosynthesis protein B [Methylobacterium nodulans ORS 2060] Length = 299 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 50/228 (21%), Positives = 82/228 (35%), Gaps = 35/228 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG A GVP+ C +R RT+SSL +S ER ++V+ Sbjct: 1 MQAIILGSAAGGGVPQWNCRCPICAMAWAGDRRVLPRTQSSLAVSPDGERW----LLVNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L R + I+AVL T+ DH+ G+ L++ +P ++A Sbjct: 57 SPDIRQQLLATPALHPRHGLRHTPIEAVLLTNGDVDHVAGL-----LTLRESQPFRLHAT 111 Query: 112 PDCMKHL--FESFRYCFKALDDRTYPPIVNPIV----IENNDVPICMKSAGGVIEAIP-- 163 + ++ + F L R + + P+ K + E P Sbjct: 112 RNILESVSANRVFDVLAADLVARREVGLNETFEPVSGLAVTLFPVPGKVPLWLEEGTPEI 171 Query: 164 ---ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + G R +AY + +L +D L+ D Sbjct: 172 GAETETTVGAMIEAGGR--RLAYVPGCARVTEDLRHRLAGVDALLFDG 217 >gi|325002629|ref|ZP_08123741.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudonocardia sp. P1] Length = 297 Score = 79.0 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 91/313 (29%), Gaps = 65/313 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP----TNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ C T P RT+SS+ +S ER +V+ Sbjct: 1 MRVRILGSAAGGGFPQWNCGCPGCRAVRDGTRPATPRTQSSIAVSPDGERW----WLVNA 56 Query: 61 GPDFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ L + VL T DH G+ L++ + V+A Sbjct: 57 SPDVRTQLADTPALHPTGDRASPLQGVLLTDAEIDHTLGL-----VLLREGSGVHVHATA 111 Query: 113 DCMKHLF---------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + L E F + +V DVP G Sbjct: 112 ASERTLRAGTGLLDTLEKFCPVHWTPVVPGTGHDLGGLVYRAFDVPTAKHDRFGT----- 166 Query: 164 ILQQHGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIID---------- 207 G +G+RF + A Y V L +L D L+ID Sbjct: 167 --GGDGAGRVVGYRFTDTASGRSAVYLPGVQQLTPAVLGELAGADVLLIDGTTWHDDEMI 224 Query: 208 ----ALKNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPS 255 A K H + SL + + + H++ D D + + Sbjct: 225 RLGLASKTAHDMGHLHVGGPGGSLDVLSRLGLPRVVYVHVNNTNPILLDDSDERAEVEKA 284 Query: 256 RVVPAFDGMQFSS 268 DG+ Sbjct: 285 GFTVGTDGLDLEV 297 >gi|222082153|ref|YP_002541518.1| pyrroloquinoline quinone biosynthesis protein PqqB [Agrobacterium radiobacter K84] gi|221726832|gb|ACM29921.1| coenzyme PQQ biosynthesis protein B [Agrobacterium radiobacter K84] Length = 302 Score = 78.6 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 106/317 (33%), Gaps = 73/317 (23%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTN-----PKNRRTRSSLKISRVSERGSNTTVIV 58 F +LG A G+P+ C P+ T+SSL +S ++V Sbjct: 2 TVRFLVLGAAAGGGLPQWNCGCPNCAAARQGTLAPQ---TQSSLAVSVDGRNW----LVV 54 Query: 59 DTGPDFYMQV----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ LR+ I +V+ T+ DH+ G+ L++K+P + Sbjct: 55 NASPDIRQQLYDRHALWPKDLRD--SPIKSVVLTNGDVDHVAGL-----LTLREKQPFQL 107 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----IPI 164 A ++ L E+ FK LD P V IE + + A +P+ Sbjct: 108 LATKALLETLEENP--IFKVLD----PAHVKQKPIELETPFFPLNGLETRLFAVAGKVPL 161 Query: 165 LQQHGRISSLG----------FRFG--NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 + G LG FR G + Y A ++++ D L D Sbjct: 162 YLEKGE-PELGLETEQTVGMEFRVGARRIFYIPGCGAISPALVDRIAGADLLFFDGTVFT 220 Query: 210 -----------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMV---LKS 252 K G H + SL+ + ++ +I H++ Sbjct: 221 DDEMIRTGTGQKTGRRMGHMPISGPDGSLEALSRLSIGRSIYIHINNTNPIWRAGPERAE 280 Query: 253 T-PSRVVPAFDGMQFSS 268 +DGM+ + Sbjct: 281 LERHGFAVGYDGMEITL 297 >gi|153007006|ref|YP_001381331.1| ribonuclease Z [Anaeromyxobacter sp. Fw109-5] gi|152030579|gb|ABS28347.1| ribonuclease Z [Anaeromyxobacter sp. Fw109-5] Length = 314 Score = 78.6 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 95/325 (29%), Gaps = 80/325 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ P I R + L + R E +VD G Sbjct: 2 LRLTFLGTSAAQ--PTI--------------HRNLTGLAVRRDREL-----FLVDCGEGT 40 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHG-IDGLRGYFLKQK-RPIDVYAAPDCMKHL--- 118 Q++R +DA+ +TH HADH G I LR ++ + +DVY + L Sbjct: 41 QRQMIRFGTGFDVDAIFFTHFHADHYLGAIGFLRTLSMQGRTTAMDVYGPRPAKRLLDVM 100 Query: 119 ------FESFRY----------------CFKALDDRTYPPIVNPIVIENNDV----PICM 152 +F + P V ++E+ P Sbjct: 101 LFTGTERLAFDVRIHEVAPGADVRRDGCLMRPFATVHRTPSVGWALVEDERPGRFHPERA 160 Query: 153 KSAGGVIEAIPILQQHGRISSLGF--------------RFGNVAYCTDVNAFPAESLEKL 198 + G + Q G +LG R V D A ++ Sbjct: 161 AALGVPKGPLYGALQRGEAVTLGDGRVVQPEQVVEPRRRGRTVVVTGDTRPC-AGTIAAA 219 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY------ 246 + D L+ D + H + E+ + +LTH+ D Sbjct: 220 RGADLLVHDCTFGDAEQARARETMHSTAREAAGVAREAGVRELVLTHLSTRYDRDWQPLV 279 Query: 247 DMVLKSTPSRVVPAFDGMQFSSPIP 271 D + A DGM P+P Sbjct: 280 DEARAEWAGSLSVASDGMTIEVPLP 304 >gi|237802430|ref|ZP_04590891.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025287|gb|EGI05343.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. oryzae str. 1_6] Length = 303 Score = 78.6 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 100/319 (31%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + ++ IE + + P+ Sbjct: 110 CTEMVHEDLSTGFP-LFEMLKH--WNGGLDWNRIELHGSFVIPACPNLHFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIID------ 207 H G G + Y + +K+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALADKMRDADCLLVDGTMWDD 226 Query: 208 --------ALKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHV-----DLDYDMV 249 + G H L++S L+ +E + +L H++ D D Sbjct: 227 DEMQRRGVGTRTGREMGH--LAQSGPGGMLEVLEGFPQQRKVLIHINNTNPILDEDSPQR 284 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + V A+DGM Sbjct: 285 AELVRRNVEVAYDGMSIEL 303 >gi|224025003|ref|ZP_03643369.1| hypothetical protein BACCOPRO_01735 [Bacteroides coprophilus DSM 18228] gi|224018239|gb|EEF76237.1| hypothetical protein BACCOPRO_01735 [Bacteroides coprophilus DSM 18228] Length = 268 Score = 78.6 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 74/233 (31%), Gaps = 50/233 (21%) Query: 52 SNTTVIVDTGPDFY-------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++D G + L + I AV TH HADHI + L G K Sbjct: 22 DTDVILIDAGIGIRTIKKVFKERGLDMGL--IRAVFITHDHADHIKAVGHLAG-----KH 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y+ P+ + + YC D + + + Sbjct: 75 NIPIYSTPEVHQGINR--SYCMTEKLDEA----------HTHFIRKGETMQLKDFQITCF 122 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H ++G+ A+ TD+ + + ++L+++A L+ G + Sbjct: 123 EVPHDGTDNVGYCISIDGKTFAFLTDIGHITETAAHYIGMANYLVLEANYDETMLRMGPY 182 Query: 215 SS-----------HFSLSESLKKIELINP---KNAILTHMHVDLDYDMVLKST 253 + H S E I P + L H+ D ++ + T Sbjct: 183 PAHLKERIAGPNGHMSNREMADYIANHKPEGLRYLWLCHLSKDNNHPELAYKT 235 >gi|307566290|ref|ZP_07628732.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] gi|307344984|gb|EFN90379.1| metallo-beta-lactamase domain protein [Prevotella amnii CRIS 21A-A] Length = 267 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 76/235 (32%), Gaps = 46/235 (19%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Q + I ++ TH HADH+ + + + I Sbjct: 21 ETDCLMIDCGVGMRLLKKYFQNYNLPIKMIKHIILTHDHADHVKAVGSIS-----KDLNI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + ++ + +D + I IE G P Sbjct: 76 PVYATELVHQGIRKNLA-VHRKIDSKLVVEIEKQERIE-----------IGEFSVTPFSV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID---------ALKNGL 213 H +G+ + TD E L+ + ++L+++ A Sbjct: 124 PHDSTDCVGYCIEHEGISFVLVTDCGQVTEEILKYISKANYLVLESNHEPEKLIAGSYPA 183 Query: 214 H--------SSHFSLSE---SLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 H + H S + +L + K+ L H+ + ++ + + T + Sbjct: 184 HLKKRILGATGHLSNEDCGKALVEGATSKLKHVWLCHLSDENNHPELARKTIENI 238 >gi|212638820|ref|YP_002315340.1| ribonuclease Z [Anoxybacillus flavithermus WK1] gi|254808603|sp|B7GHJ4|RNZ_ANOFW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|212560300|gb|ACJ33355.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 312 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 89/300 (29%), Gaps = 92/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ GVP R S++ + + ERG+ T + D G Sbjct: 1 MELLFLGTGS--GVPSKG--------------RNVSAVALQLLEERGA--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL G Q VY + Sbjct: 43 QHQILHTSIRPRRIERIFITHLHGDHIFGLPGLLGSRSFQGGETPLFVYGPAGIRSFVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + L Y IE + + ++ A L HG + S GFR Sbjct: 103 ALAVSGTRLKYELY--------IEEFTEGVIFEDEQFIVTAK--LLDHG-LPSYGFRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G V D Sbjct: 152 KDLPGTLLVDELRALGVKPGPIYQQIKRGEVVTLDDGTVIDGRKFVAPPKKGRMIAIMGD 211 Query: 192 ----AESLEKLQNLDFLIIDA--LKNGLHSS----HFSLSESLKKIELINPKNAILTHMH 241 S+E + +D L+ +A N H + H + ++ + + K ILTH+ Sbjct: 212 TRYCEASVELAEGVDVLVHEATFSANEAHLARDYYHSTTVQAAEVAKRARAKQLILTHIS 271 >gi|57233573|ref|YP_182322.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] gi|57224021|gb|AAW39078.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] Length = 257 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 88/255 (34%), Gaps = 54/255 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIVDTGP 62 T LG G + R S +I ++D GP Sbjct: 9 SITFLGTGGA---------------------RFMVSRQILASGGIWLNLDGKRFLIDPGP 47 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPIDVYAAPDCM 115 +QV R + ++ A+L +H H DH ++ + +G F K + A D + Sbjct: 48 GSIVQVCRLGLNPENLSAILLSHRHLDHSGDVNVMIEAMTQGGFNKNGHFL---APEDAL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + Y P +N + + + + I+ + + + G Sbjct: 105 DNEPVIYSYL---------RPFLNDLTVLEEEHEYNLDG----IKVFTTRRHQHPVETYG 151 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIEL 229 F F + Y +D F + + D LII+ + H S++++ K I Sbjct: 152 FIFESCGKRIGYVSDTRYF-EDMPQIYAGCDVLIINVVLRESIERIYHLSIADAAKLISG 210 Query: 230 INPKNAILTHMHVDL 244 PK AILTH + L Sbjct: 211 AKPKTAILTHFGLQL 225 >gi|331666013|ref|ZP_08366907.1| putative periplasmic protein [Escherichia coli TA143] gi|331057064|gb|EGI29058.1| putative periplasmic protein [Escherichia coli TA143] Length = 312 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 42/257 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 N T ++D G +Q+++ + ID +L TH H+DHI + Q + I Sbjct: 56 GNKTWLIDAGYGASLQLVKNNIPLRQIDNILLTHLHSDHILDYPSVLMNAWASGLQDKNI 115 Query: 107 DVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ P + F + P ++ DV + + Sbjct: 116 HVFGPPGTRAMTAASWQVFDRDITLRMEEEGKPDPR-KLVTAQDVGEGVVYKDDTVTVTA 174 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHS 215 + H + +RF + + D + FP + + D L+ +A+ + Sbjct: 175 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSYFPPLATFS--EGADILVHEAVHEPSVA 232 Query: 216 S------------------HFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKSTPSR 256 H ++ + K K IL+H+ + + + + Sbjct: 233 KLADSIGNGKTLAKAIASHHTTIEDVGKIANEAKVKKLILSHLVPITVPDETWKQEAQKN 292 Query: 257 ----VVPAFDGMQFSSP 269 +V + M + P Sbjct: 293 YSGPIVVGHENMTITIP 309 >gi|227872841|ref|ZP_03991152.1| ribonuclease Z [Oribacterium sinus F0268] gi|227841311|gb|EEJ51630.1| ribonuclease Z [Oribacterium sinus F0268] Length = 303 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 103/313 (32%), Gaps = 78/313 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P +R +SL + + +++++D G Sbjct: 2 LELCLLGTGGMMPLP----------------KRWLTSLMLRC-----NGSSLLIDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAA---PDCMK 116 + +RE+ SID + +TH HADHI G+ G L ++ +P+ + + Sbjct: 41 QI-AMREKGWSPYSIDTICFTHYHADHISGLPGMLLSMGNAERTKPVTMIGPKGLARVVN 99 Query: 117 HLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA---------- 161 L F + + + +E V + G I Sbjct: 100 GLRSIAPELPFAIEYIEIQEEEQRFSCESFQVEAFKVQHSIPCFGYKITIPRSGKFSVER 159 Query: 162 -----IPI----LQQHGR-ISSLGFRFG------------NVAYCTDVNAFPAESLEKLQ 199 IP+ QHG + G F +V YCTD P EK + Sbjct: 160 AREAGIPVSCWNRLQHGEAVEHEGSLFTPDMVMGEARRGISVVYCTDTRPIP-RIAEKAK 218 Query: 200 NLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 ++D I D L N H ++ E+ P+ LTH Y K Sbjct: 219 DVDLFICEGMYGEEDKLSNAKKHKHMTMEEAAILGREARPREMWLTHYSPSEVYPEQYKD 278 Query: 253 TPSRVVP---AFD 262 S + P A D Sbjct: 279 KFSHIFPVKFARD 291 >gi|88796989|ref|ZP_01112579.1| putative hydrolase [Reinekea sp. MED297] gi|88779858|gb|EAR11043.1| putative hydrolase [Reinekea sp. MED297] Length = 258 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 83/242 (34%), Gaps = 34/242 (14%) Query: 52 SNTTVIVDTGPDF-------YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR--GYFLK 101 + I+D GP Y Q + +V ++D + TH H+DH G+ + + + Sbjct: 10 GDRAYIIDCGPGLVRRAQQAYEQGINALKVSNLDRLFLTHLHSDHTIGLPDIIFTPWVMG 69 Query: 102 QKRPIDVYAAPDCM---KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +++P+ VY H+ +++ A P + E + Sbjct: 70 REKPLQVYGPKGTQHLVDHVNKAYSADIHARTCGLEPINLTGGRAEATEFSEGRCYEDDR 129 Query: 159 IEAIPILQQHGR-ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 ++ HG+ GF+F + D + P + Q D L+ + Sbjct: 130 VQVDAFGVNHGKGWEPFGFKFTTPDRTIVVSGDTSPCPE-VYDLWQGCDVLVHEVYSQKG 188 Query: 210 --KNGL-----HSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 + HS+ H S + + + P ++TH+ L + V F Sbjct: 189 FDRREPDWQKYHSAMHTSGLQLGEIAAQVQPGKLVMTHL---LLWGATENDLMDEVRQHF 245 Query: 262 DG 263 DG Sbjct: 246 DG 247 >gi|16801150|ref|NP_471418.1| hypothetical protein lin2084 [Listeria innocua Clip11262] gi|41017573|sp|Q92A38|RNZ_LISIN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|16414585|emb|CAC97314.1| lin2084 [Listeria innocua Clip11262] Length = 306 Score = 78.6 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 101/317 (31%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----PDCMK 116 QVLR + ++ + TH H DHI G+ GL Q + +Y Sbjct: 43 QHQVLRSHIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPAGIAEYVET 102 Query: 117 HLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVI------------- 159 L S ++ P V ++ +D+ ++S G I Sbjct: 103 SLRLSGTRLTYKINFEEIEPGVIFEDEMFLVTADDLDHGVRSFGYRIVEKDKQGALNAEK 162 Query: 160 ------EAIPILQ--QHGRISSL--GFRFGNVAYC------------TDVNAFPAESLEK 197 EA P+ Q ++G I +L G Y D LE Sbjct: 163 LKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTKE-TVSELEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 N D L+ +A G + H + ++ + N K ILTH+ D D + Sbjct: 222 AMNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKAANVKKLILTHISSRYDRDASKE 281 Query: 252 STP------SRVVPAFD 262 A+D Sbjct: 282 LLIEAKTVFENTEIAYD 298 >gi|119490850|ref|ZP_01623133.1| ribonuclease Z [Lyngbya sp. PCC 8106] gi|119453668|gb|EAW34827.1| ribonuclease Z [Lyngbya sp. PCC 8106] Length = 315 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 100/329 (30%), Gaps = 84/329 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+S+R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLSQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q LR ++ I + TH H DH+ G+ GL + ID+Y P ++L Sbjct: 42 QHQFLRSDLKISQISRIFVTHMHGDHVFGLTGLLASCGLAGNVKRIDLYGPPGLQEYLQA 101 Query: 121 --SF-----RYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE------------ 160 F Y F + ++ + + + G I Sbjct: 102 SLRFSQTHISYPFTVHPVQPGVVYEDDEYIVSCQPLKHRVTAFGYRITEKDKPGRFNVDK 161 Query: 161 ---------AIPILQQHGRISSLG---------FRFGNVA-----YCTDVNAFPAESLEK 197 I + G + +L F +A YCTD F ++E Sbjct: 162 AKALGIPPGPIYAKLKQGGVVTLADGRKINGSQFCGEPIAGRKFVYCTDTV-FCDSAVEL 220 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL------- 244 ++ D L+ +A + H + + + + + K I+TH Sbjct: 221 AKDADVLVHEATFAHQDAELAFQRLHSTSTMAAQVALMAGVKKLIMTHFSPRYAPGNAIL 280 Query: 245 --DYDMVLKSTPSRVVPAFDGMQFSSPIP 271 D K+ A+D FS IP Sbjct: 281 LDDLLTEAKAIFPNTDLAYD--FFSYEIP 307 >gi|331671470|ref|ZP_08372268.1| putative periplasmic protein [Escherichia coli TA280] gi|331071315|gb|EGI42672.1| putative periplasmic protein [Escherichia coli TA280] Length = 331 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 42/257 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 N T ++D G +Q+++ + ID +L TH H+DHI + Q + I Sbjct: 75 GNKTWLIDAGYGASLQLVKNNIPLRQIDNILLTHLHSDHILDYPSVLMNAWASGLQDKNI 134 Query: 107 DVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ P + F + P ++ DV + + Sbjct: 135 HVFGPPGTRAMTAASWQVFDRDITLRMEEEGKPDPR-KLVTAQDVGEGVVYKDDTVTVTA 193 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHS 215 + H + +RF + + D + FP + + D L+ +A+ + Sbjct: 194 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSYFPPLATFS--EGADILVHEAVHEPSVA 251 Query: 216 S------------------HFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKSTPSR 256 H ++ + K K IL+H+ + + + + Sbjct: 252 KLADSIGNGKTLAKAIASHHTTIEDVGKIANEAKVKKLILSHLVPITVPDETWKQEAQKN 311 Query: 257 ----VVPAFDGMQFSSP 269 +V + M + P Sbjct: 312 YSGPIVVGHENMTITIP 328 >gi|313618091|gb|EFR90200.1| ribonuclease Z [Listeria innocua FSL S4-378] Length = 306 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 91/327 (27%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 QVLR + ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQVLRSHIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIEPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQNGKIISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ + N K ILTH+ Sbjct: 212 TKETISELELAMNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKAANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTIFENTEIAYD 298 >gi|33240879|ref|NP_875821.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41017540|sp|Q7VAN0|RNZ_PROMA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|33238408|gb|AAQ00474.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 320 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 90/302 (29%), Gaps = 92/302 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSALALRLPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFE 120 Q LR + + + TH H DHI+G+ GL + D+Y L Sbjct: 42 QHQFLRSDLRTSQLKKIFITHMHGDHIYGLPGLMASLGLAGNSLGLDLYGP----SALKG 97 Query: 121 SFRYCFKALDDR-TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--- 176 K+ R +YP ++ + +E+ + I + ++ P++ R+ + + Sbjct: 98 FLDGILKSSSSRISYPMKIHGLELESAENKIIFEDNDFLVTCTPLIH---RVPAFAYRVD 154 Query: 177 ------RFG---------------------------------------------NVAYCT 185 RF + YCT Sbjct: 155 EKAKPGRFDVEKAKALRIPPGPIYSQLQKGQIVKLKDGRIFNGNDFCGPQRKGASFVYCT 214 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTH 239 D F +L+ D LI +A + H + + + + N +LTH Sbjct: 215 DT-MFAQTALKLANGADLLIHEATFSHEDSDLAYQRQHSTSTMAAQIASEANVGQLVLTH 273 Query: 240 MH 241 + Sbjct: 274 LS 275 >gi|77461379|ref|YP_350886.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas fluorescens Pf0-1] gi|123603049|sp|Q3K5Q9|PQQB_PSEPF RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|77385382|gb|ABA76895.1| coenzyme PQQ synthesis protein B [Pseudomonas fluorescens Pf0-1] Length = 303 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 96/313 (30%), Gaps = 71/313 (22%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ IS V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCVNCAGFRDGSLNAQARTQSSIAISDDGVNW----VLCNASPDI 60 Query: 65 YMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQSFAPMQPGRALRD--TGISAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDM 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQ 167 + L F F L + ++ IE + +P+ Sbjct: 114 VHEDLSTGFP-LFTMLKH--WNGGLDWNRIELDQSFTVAACPSLRFTPLPLRSAAPPYSP 170 Query: 168 HGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 H G G + Y + A LE + D +++D Sbjct: 171 HRFDPHPGDNIGLIVEDLGTGGKLFYAPGLGKVDAPLLEIMAGSDCVLVDGTMWDDDEMQ 230 Query: 210 ---------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----- 255 + H + L+ +E + + +L H++ ++ + +P Sbjct: 231 RRGVGTRTGREMGHLAQNGPGGMLEVLEQLPEQRKVLIHINNTNP--ILDEDSPERAELV 288 Query: 256 --RVVPAFDGMQF 266 V A+DGM Sbjct: 289 RRNVEVAYDGMSI 301 >gi|296109876|ref|YP_003616825.1| ribonuclease Z [Methanocaldococcus infernus ME] gi|295434690|gb|ADG13861.1| ribonuclease Z [Methanocaldococcus infernus ME] Length = 309 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 102/305 (33%), Gaps = 87/305 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P RR + + + ++D G + Sbjct: 2 LEITFLGTGAAI----------------PSKRRNHMGIALKFNGDI-----YLLDCGENI 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMK--H 117 Q L + I A+ TH H DHI GI G+ + + ++ +++Y + Sbjct: 41 QRQFLYTNLSPMKIKAIFITHLHGDHILGIPGIIQSLSFMGRTQK-LEIYGPKGIKEIVE 99 Query: 118 LFESFRY--------------------------CFKALDDRTYPPIVNPIVIENNDVPIC 151 + ++F Y CF A + Y P I E + Sbjct: 100 MAKNFGYNCIEYEVEVKEIKKNKEVKILEEKDFCFYAYPTKHYIPSYAYIFKEIKKPRLD 159 Query: 152 MKSA---GGVI--------EAIPILQQHGRISSLGF---------RFGNVAYCTDVNAFP 191 + A G + E IP+ HG F R VAY D Sbjct: 160 INKAKELGIKVGPDLKKLKEGIPVKNIHGETI---FPEQVLLPPKRGICVAYSGDTLPIE 216 Query: 192 AESLEKLQNLD--FLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVD 243 +L L+NLD LI +A + S H ++ ++ + +L + ILTH+ Sbjct: 217 DFAL-FLKNLDCSLLIHEATFDSSEKSLAEETYHSTVEDAYRIFKLSQAEKLILTHISAR 275 Query: 244 LDYDM 248 D + Sbjct: 276 YDKEE 280 >gi|224823901|ref|ZP_03697010.1| coenzyme PQQ biosynthesis protein B [Lutiella nitroferrum 2002] gi|224604356|gb|EEG10530.1| coenzyme PQQ biosynthesis protein B [Lutiella nitroferrum 2002] Length = 309 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 101/317 (31%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR---SSLKISRVSERGSNTTVIVDTG 61 ILG A G+P+ C +R T SS+ +S V+++ Sbjct: 2 LRVIILGAAAGGGLPQWNCACDVCQAARLGHRATPQTQSSIAVSADGAHW----VLINAS 57 Query: 62 PDFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q + + AVL T+ DHI G+ L++ + VYA+ Sbjct: 58 PDIRQQFAATPALQPQSFPRSSPLSAVLLTNADVDHIAGL-----LSLRESQAFPVYASG 112 Query: 113 DCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENND--------VPICMKSAGGVIEAI 162 + L + F + R + P + + + P + + Sbjct: 113 RVQRVLEANAVFNVLDRQQVARRTLTLDQPQPVLDANGADTGVRVEPFTIPGKVALWLED 172 Query: 163 PILQQHGRIS---------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 P G + ++G R + Y A P + +L+ D L+ D Sbjct: 173 PHAANFGSVPEDTIGLALSAVGSR-SRLFYLPGCAALPDDIKARLRPEDSLLFDGTTFTE 231 Query: 214 ---------HSS-----HFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 H + H +S ++ + + + H++ ++L +P Sbjct: 232 DEMITCGVGHKTASRMGHLPMSGEGGAIALWQDVPLARKLFIHINNTNP--VLLADSPER 289 Query: 256 ------RVVPAFDGMQF 266 A DGM+F Sbjct: 290 AAIVAAGWQLARDGMEF 306 >gi|239826190|ref|YP_002948814.1| beta-lactamase [Geobacillus sp. WCH70] gi|239806483|gb|ACS23548.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 244 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 37/237 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGY-----FLKQK 103 ++VD G ++ V ++AV+ +H H DH+ I L+ L + Sbjct: 25 EHDEFRLLVDCGSGVLSKLQNYVSVEKLNAVIVSHYHHDHVADIGPLQYARLIKKNLGVQ 84 Query: 104 RPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y P D + + + + E G Sbjct: 85 LPVLPIYGHPF----------------DQGEFARLAHEGITEAVAYDPERSLQVGPFHIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H ++ R V Y D + P + +N D LI + +N Sbjct: 129 FMKTVH-PVTCYAMRITAGDATVVYTADSSYLPEFA-PFAENADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 + H + E+ N LTH+ ++ ++ + +V A G+ + Sbjct: 187 AGHMTSEEAAMIARDANVTELWLTHLPHFGEHTQLVSEANAVFSGKVQLAKTGLVWE 243 >gi|170743832|ref|YP_001772487.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacterium sp. 4-46] gi|226704957|sp|B0UE10|PQQB_METS4 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|168198106|gb|ACA20053.1| coenzyme PQQ biosynthesis protein B [Methylobacterium sp. 4-46] Length = 299 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 101/315 (32%), Gaps = 67/315 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT---NPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 ILG A GVP+ C + + + RT+SSL +S E ++V+ Sbjct: 1 MQAIILGSAAGGGVPQWNCRCPHCTMAWAGDARVKPRTQSSLAVSPDGETW----LLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI-- 106 PD Q+ L I AVL T+ DH+ G+ LR + L R I Sbjct: 57 SPDIRQQLFATPALHPARGLRHSPIAAVLLTNGDVDHVAGLLTLRESQPFRLHATRNILD 116 Query: 107 --------DVYAAPDCMKH---LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 DV A + L ESF P + + VP+ ++ Sbjct: 117 SVSANRVFDVLAPEHVARREVALDESFA---------PVPGLAVTLFAVPGKVPLWLEEG 167 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 I G + G + +AY + +L +D L+ D Sbjct: 168 TPEI-GQETETTVGALIEAGGK--RLAYVPGCARVTDDLRRRLSGVDVLLFDGTVYLDDD 224 Query: 209 -LKNGLHSS------HFSLS---ESLKKIELINPKNAILTHMHVDLDY-----DMVLKST 253 ++ G+ + H ++ ++ + + I H++ + Sbjct: 225 MIRAGVGTKTGWRMGHVPMTGEGGAIAALAEVPIGRRIFVHINNTNPVLVEESEARRAVE 284 Query: 254 PSRVVPAFDGMQFSS 268 A DG+ + Sbjct: 285 AEGWTVAHDGLTLTL 299 >gi|322835539|ref|YP_004215565.1| coenzyme PQQ biosynthesis protein B [Rahnella sp. Y9602] gi|321170740|gb|ADW76438.1| coenzyme PQQ biosynthesis protein B [Rahnella sp. Y9602] Length = 303 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 103/319 (32%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ + C +N RT+SS+ +S V+ Sbjct: 1 MQIIVLGSAAGGGFPQWNCNCSNCQ--GVRNGTMKTSPRTQSSIAVSDNGTDW----VLC 54 Query: 59 DTGPDFYMQ------VLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q +++ VL I +++ T DH G+ LR Q V+ Sbjct: 55 NASPDICHQIAATPELIKHDVLRGTAIGSIILTDSQIDHCTGLLNLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ + L F F L + + I AIP+L Sbjct: 110 CTPEVHEDLTTGFP-IFTML--SHWNGGLQHHAIGPEKRFSVAVCPNLKFTAIPLLSNAP 166 Query: 170 RISSLGFRFG-----NVA-YCTDVN-----------AFPAES-LEKLQNLDFLIIDA--L 209 S +R N+A + D P + L+ L D L+ID Sbjct: 167 PYSK--YRGKPLPGHNIALFIEDTKTGTSLLYAPGLGEPDDELLKWLHKADCLLIDGTLW 224 Query: 210 KNGLHSS------------HFSLSES---LKKIELINPKNAILTHMHVDLDY-----DMV 249 ++ ++ H +L+E + + + + IL H++ Sbjct: 225 QDNELATTGVGRNTGKDMGHLALAEEQGLIALLSSLPAERKILIHINNTNPILNEASAER 284 Query: 250 LKSTPSRVVPAFDGMQFSS 268 T + ++DGM+ Sbjct: 285 QALTQQNIEVSWDGMRIEL 303 >gi|290960042|ref|YP_003491224.1| hypothetical protein SCAB_56571 [Streptomyces scabiei 87.22] gi|260649568|emb|CBG72683.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 250 Score = 78.6 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 76/251 (30%), Gaps = 50/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R PI VY + Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCDPIPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ G H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPG------TFEIGPFTVHTERVAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D E + D + +A K + H + E+ + Sbjct: 148 RIEHGGRVLTYSGDT-GVTDTLDELARGADLFLCEAAFTHGKENIPDLHLNGREAGETAA 206 Query: 229 LINPKNAILTH 239 + +LTH Sbjct: 207 RAGARRLVLTH 217 >gi|327480686|gb|AEA83996.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas stutzeri DSM 4166] Length = 303 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 99/309 (32%), Gaps = 59/309 (19%) Query: 9 ILGCGASLGVPRITGDWGAC--DPTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C N RT+SS+ IS ++ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCAGLRAGTLNAKARTQSSIAISDNGVDW----ILCNASPDI 60 Query: 65 YMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ +I A++ DH G+ L++ P +V+ Sbjct: 61 RAQLESFPTLQPARAPRDTAIGAIVLLDSQIDHTTGL-----LTLREGCPHEVWCTEMVY 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAI---PILQQHGRI 171 + L F F L+ NPI + N +P C I P H Sbjct: 116 QDLTTGFP-LFNMLEHWNGGLKWNPITLRGNFSIPCCPNLHITPIPLRSSAPPYSPHRND 174 Query: 172 SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA---------LKN- 211 G G + Y + E L ++ D L++D ++ Sbjct: 175 PHPGDNIGLLIEDRNTGGTLFYAPGLGQISEELLATMRRADCLLVDGTLWRDDEMLVREV 234 Query: 212 -GLHSSHF-SLSES-----LKKIELINPKNAILTHMHVD---LDYDMVLKST--PSRVVP 259 S L +S ++ ++ + IL H++ LD D V + + Sbjct: 235 GTKLGSEMGHLQQSGPGGMIEVLDGMPAVRKILIHINNTNPILDEDSVEREILGEHGIEV 294 Query: 260 AFDGMQFSS 268 A+DGM Sbjct: 295 AYDGMNIEL 303 >gi|222099215|ref|YP_002533783.1| Beta-lactamase domain protein [Thermotoga neapolitana DSM 4359] gi|221571605|gb|ACM22417.1| Beta-lactamase domain protein [Thermotoga neapolitana DSM 4359] Length = 254 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 85/230 (36%), Gaps = 44/230 (19%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +S+ + + NT ++VD + + +R L +DA+ TH H DH++G+ Sbjct: 17 RDNTSIFL-----KSGNTFILVDCPGNVWGRLLKMRLNPLELDAIFITHGHVDHVYGLPS 71 Query: 95 LRGYFL--KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L +KRP+ +Y D + + + +++ I N+ + Sbjct: 72 LLEMMRLNGRKRPLSIYVGEDFLVLVEK----------------LLDLFEIANHPDSFKI 115 Query: 153 KSAGG----------VIEAIPILQQHG-RISSLGFRFGN--VAYCTDVNAFPAESLEKLQ 199 G + H R +L FR N + Y +D A+ E Sbjct: 116 DLFGLDYKSSLFRVKDLMIETFPVNHTVRNLALKFRNDNVSIVYSSDT-AYHEPLAEFAS 174 Query: 200 NLDFLIIDA-----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 N D LI +A L + H + S++ + E K L H+ + Sbjct: 175 NCDVLIHEATMSTKLGDAFREGHSTPSDAARIAEKARVKQLFLVHVGFSV 224 >gi|154151692|ref|YP_001405310.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|154000244|gb|ABS56667.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 262 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 60/261 (22%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHAD 87 R ++ S GSN ++++D G +R + A+L TH H D Sbjct: 1 MRCTILASGSKGNCTYVAGSNGSLLIDAGLSAKETFVRMTKTGCDPDRVAAILVTHEHGD 60 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+D L +K VY + F + + P ++ Sbjct: 61 HIRGLD-----VLARKLSCPVYGTQGTLAE--------FLSHRRTSDRP------LQIQA 101 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDF 203 + G +P H GF + YCTD + L+ L++ D Sbjct: 102 CQYDTAFSAGEFRVLPFATSHDAAEPCGFVLQENGSKIGYCTDTGIVTSHMLDLLRHCDG 161 Query: 204 LIIDA------LKNGLHS-----------SHFSLSESLKKIELIN--PKNAILTHMHVDL 244 +++++ L NG + H S + + ++ + +L+H+ Sbjct: 162 VVLESNHCPEMLANGPYPESLKRRIRSNRGHLSNPAAARVLQTLGKDVTQVVLSHLS--- 218 Query: 245 DYDMVLKSTPSRVVP-AFDGM 264 + +TP R A DGM Sbjct: 219 ----EINNTPERARASARDGM 235 >gi|28210613|ref|NP_781557.1| putative hydrolase [Clostridium tetani E88] gi|28203051|gb|AAO35494.1| putative hydrolase [Clostridium tetani E88] Length = 294 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 87/268 (32%), Gaps = 51/268 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + +LG G P +P RS ++ V + + IVD Sbjct: 3 MNNETKLILLGTGT----PN----------ADPD----RSGASVAVVV---GDNSYIVDF 41 Query: 61 GPDFYMQVLREQVLSIDAVL--------YTHPHADHIHGIDGLR--GYFLKQKRPIDVYA 110 GP Q + + A+L TH H+DH G L + L+++ P+ V+ Sbjct: 42 GPGVVRQAAKAYKKGVHALLAKNLKTAFLTHLHSDHTTGYPDLIFTPWVLEREEPLKVFG 101 Query: 111 APDCM---KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +H+ +++ P N ++ ++ + + + Sbjct: 102 PKGLKSMTEHILAAYKMDIDERVYGLEPANKNGWKVDVTEIESGVIFEDEKVTVEAFPVK 161 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-----------NG 212 HG + ++F + D +E + D L+ + Sbjct: 162 HGAFEAYAYKFHTPDKTIVISGDTAPV-DIMVEIAKGCDILVHEVYHFEGFKSRTEEWRK 220 Query: 213 LHSS-HFSLSESLKKIELINPKNAILTH 239 HSS H S E + + PK +L H Sbjct: 221 YHSSVHTSSYELGEIAQKAKPKLVVLYH 248 >gi|126661173|ref|ZP_01732250.1| ribonuclease Z [Cyanothece sp. CCY0110] gi|126617546|gb|EAZ88338.1| ribonuclease Z [Cyanothece sp. CCY0110] Length = 318 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEV--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q+LR ++ I + TH H DHI+G+ GL +PI++Y P+ +L Sbjct: 42 QHQLLRSDVKISQITRIFVTHMHGDHIYGLTGLLASCGLAGSGQPIEIYGPPELKDYLKA 101 Query: 121 SFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y FK + PI I+ E+ + +H RI + G+R Sbjct: 102 CAKYSHFKLPHHIRFHPIHPGILYEDKE-----------FSVSCGQLKH-RIPAYGYRI 148 >gi|229592975|ref|YP_002875094.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas fluorescens SBW25] gi|259534350|sp|C3K348|PQQB_PSEFS RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|229364841|emb|CAY52884.1| coenzyme PQQ synthesis protein B [Pseudomonas fluorescens SBW25] Length = 303 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 94/315 (29%), Gaps = 71/315 (22%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ IS V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIAISDDGVNW----VLCNASPDI 60 Query: 65 YMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQGFAPMQPGRALRD--TGISAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDM 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQ 167 + L F F L + + IE + +P+ Sbjct: 114 VHEDLSTGFP-LFTMLTH--WNGGLAWNRIELDASFTIPACPNLRFTPLPLRSAAPPYSP 170 Query: 168 HGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 H G G + Y + A LE + D L++D Sbjct: 171 HRFDPHPGDNIGLIVEDLRTGGKLFYAPGLGKVDAPLLEIMAGSDCLLVDGTMWDDDEMQ 230 Query: 210 ---------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----- 255 + H + L +E + + +L H++ ++ + +P Sbjct: 231 RRGVGTRTGREMGHLAQNGPGGMLDVLEQLPEQRKVLIHINNTNP--ILDEDSPERAELV 288 Query: 256 --RVVPAFDGMQFSS 268 V A+DGM Sbjct: 289 RRNVEVAYDGMSIEL 303 >gi|161503804|ref|YP_001570916.1| hypothetical protein SARI_01891 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865151|gb|ABX21774.1| hypothetical protein SARI_01891 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 312 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 84/256 (32%), Gaps = 40/256 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPVRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHII 118 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 119 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-KLVKATDIGQGVIYRDELVTISA 177 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 178 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 236 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKST 253 H ++ + K + K +L+H+ D+ +K+ Sbjct: 237 LADSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVTDDVWQQEAMKNY 296 Query: 254 PSRVVPAFDGMQFSSP 269 V+ D M + P Sbjct: 297 QGPVIVGHDNMTINVP 312 >gi|187927950|ref|YP_001898437.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12J] gi|187724840|gb|ACD26005.1| beta-lactamase domain protein [Ralstonia pickettii 12J] Length = 327 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 97/319 (30%), Gaps = 75/319 (23%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + H LG G P K+R S+L I + T +VD G Sbjct: 30 RTGTHLITLGT---RGGPIP-----------AKDRAQSSNLLIV------NGTYYLVDAG 69 Query: 62 PDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKH 117 + I V TH H DH G+ L ++ PIDVY P Sbjct: 70 DGVLRRVTQAGANFRQIGKVFITHGHDDHTAGLGALMSVAWDFQRHDPIDVYGPPGTAAL 129 Query: 118 LFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQ--------- 166 + + +Y + R P+ V +DV + I+ + Sbjct: 130 VKGAIQYFTVNAEIRWAEGRRTPLGDVFVGHDVAPGLIYQDQNIKVTAVENTHFHIPEGS 189 Query: 167 -QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID-------------- 207 HG+ S +RF + + D E ++ D L+ + Sbjct: 190 PYHGKYKSYAYRFQTPDRVIVFTGDT-GPSDAVTELARDADTLVSEVGSSEDVKQVFIKN 248 Query: 208 ------------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-DYDMVLKSTP 254 AL H + K + K +LTH+ + ++D + P Sbjct: 249 GTWQGMTPEQQAALMRHEVEEHLTPDAVGKMAARAHVKTVVLTHLLPTVNEHDDYQRYVP 308 Query: 255 S-------RVVPAFDGMQF 266 +VV A D M+F Sbjct: 309 EVKKFFSGQVVVAKDLMEF 327 >gi|330830709|ref|YP_004393661.1| ribonuclease Z [Aeromonas veronii B565] gi|328805845|gb|AEB51044.1| Ribonuclease Z, putative [Aeromonas veronii B565] Length = 340 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 94/268 (35%), Gaps = 52/268 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D + ++LG G VP+I+ R S + N ++ D G Sbjct: 43 DIFRVSLLGTGTP--VPQIS--------------RGGYSTLVEA-----GNQKLVFDFGR 81 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDC 114 + ++ L + ++A TH H+DH +G+ L + ++ P+++Y Sbjct: 82 NSATRLWQLHIPIGRVNAFFLTHFHSDHTNGLADLWLTGWLQPAYGQRHAPMELYGPKST 141 Query: 115 MK---HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L +++ P ++ + I +++V + ++ HG Sbjct: 142 DALASGLQQAYATDIATRVKDEGTP-LDGVEINSHEVTAGVVYNHDGVKVTAFDNDHGVN 200 Query: 172 --SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLHS----- 215 S G+R +V D + E +++ + D L+ A + + Sbjct: 201 IKPSFGYRIDYHGHSVVLSGDT-RYSPEVVKQAKGADLLVHCVSMTSAEQMKANPGYKAI 259 Query: 216 -SHF-SLSESLKKIELINPKNAILTHMH 241 H S ++ + + P + +H+ Sbjct: 260 AGHLASPEQAAQVMNEAKPALTVFSHIG 287 >gi|86156829|ref|YP_463614.1| ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-C] gi|85773340|gb|ABC80177.1| RNAse Z [Anaeromyxobacter dehalogenans 2CP-C] Length = 305 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 96/325 (29%), Gaps = 80/325 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ P I R ++ + R +VD G Sbjct: 2 LRLTFLGTSAAQ--PTI---------------RRN----LTGHAVRRERELFLVDCGEGT 40 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHG-IDGLRGYFL-KQKRPIDVYAAPDCMKHLF-- 119 Q+++ + A+ +TH HADH G I LR + + P+D+Y + L Sbjct: 41 QRQLIQFGAGFDVAAIFFTHFHADHYLGAIGFLRTLSMQNRAEPLDLYGPRPAKRLLETM 100 Query: 120 -----ESFRYCFKALDDRTY----------PPIVNPIVIENNDVPICMKSAGGVIEAI-- 162 E F Y + + R P + + + G Sbjct: 101 LFTGAERFSYEVRIHEVRAGEAVRRDGCAMVPFPTEHRTPSLGWALREDARPGRFHPEKA 160 Query: 163 -PILQQHGRISSLGFRFGNVAYCTDVNAF-PAE----------------------SLEKL 198 + G + R G D A P E ++E Sbjct: 161 AALGVPKGPLFGALQR-GEAVTLPDGRAVRPEEVVEPPRRGRALVITGDTRPCAATVEAA 219 Query: 199 QNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD--YDMVL 250 + D L+ D ++ + H + + + +LTH+ D ++ ++ Sbjct: 220 RGADVLVHDCTFGDGEVERAEETLHSTARGAAQVAREAGVGRLVLTHLSTRYDRAWEPLV 279 Query: 251 KSTPSRVV----PAFDGMQFSSPIP 271 + A DGM P+P Sbjct: 280 QQAREAWQGPLDVAHDGMVLEIPLP 304 >gi|198274590|ref|ZP_03207122.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] gi|198272037|gb|EDY96306.1| hypothetical protein BACPLE_00742 [Bacteroides plebeius DSM 17135] Length = 268 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 79/241 (32%), Gaps = 53/241 (21%) Query: 52 SNTTVIVDTGPDFY-------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T ++VD G ++L + I AVL TH HADHI + L +K Sbjct: 22 DSTAILVDAGIGIRTIKKVFKERML--NLEEIQAVLVTHDHADHIKAVGHL-----GEKH 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VY P+ + + YC + G Sbjct: 75 GIPVYTTPEIHEGMKH--SYCMTE----------RLKPERTRFIQKEETFNVGDFTITCF 122 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H ++G+ ++ TD+ + +Q D+LI++A L+ G + Sbjct: 123 EVPHDGTDNVGYCITAGDKTFSFLTDIGHITPTAARFIQQADYLILEANYDDSMLQMGPY 182 Query: 215 S-----------SHFSLSESLKKIELINP---KNAILTHMHVDLDYDMVLKSTPSRVVPA 260 H S E + P K+ L H+ D ++ + T V A Sbjct: 183 PQHLKERIAGPNGHMSNHEMADYLSHHFPQHLKHLWLCHLSKDNNHPELAFKT---VELA 239 Query: 261 F 261 F Sbjct: 240 F 240 >gi|255305690|ref|ZP_05349862.1| hypothetical protein CdifA_03803 [Clostridium difficile ATCC 43255] Length = 273 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 97/287 (33%), Gaps = 41/287 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I+G G +P C+ K R R SL I + +++DT Sbjct: 1 MKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYI-------DDIKMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR----GYFLKQKRPIDVYAAPDCMKH 117 D + R+++ + + +H DH+ GI + + + PI YA P+ ++ Sbjct: 54 EDIAVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIED 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + C K Y ++N I I +I P + + Sbjct: 114 INRTNLDCLKY-----YGNVINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEK 168 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLII-----DA-------LKNGLHSSH-FSLSESL 224 V Y N P + + D LII D LK+ F+L E + Sbjct: 169 --KVIYAC-CNPKPFTHSDMYFDADVLIISLVSDDGILNDGTKLKDTPFKDEIFTLDEIV 225 Query: 225 KKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 + K I+TH+ Y + K + A+DGM+ Sbjct: 226 EIKNYYRIKKIIITHIDEIWGKSYGYYSELEKKL-DNIYFAYDGMEI 271 >gi|297170850|gb|ADI21869.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured verrucomicrobium HF0130_25O04] Length = 267 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 80/225 (35%), Gaps = 67/225 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M+ +F ILG +S +++ R S +T+++D Sbjct: 1 MQVEIYFKILGSSSSG----------------------NAAVL------RTSESTILIDA 32 Query: 61 GPDFYMQ--VLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 G +L+E+ + +DAV TH H DH GI GL Y + VYA D + Sbjct: 33 GLSCKKLHFLLKEEGIEIEELDAVFLTHEHNDHSAGIRGLSKYC-----NLPVYANQDTV 87 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + PP N + E P + + P H +G Sbjct: 88 QAVQAKLP----------RPP--NWKIFETG-APFSFR----SFKVHPFSVPHDAYDPVG 130 Query: 176 FRFG------------NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 F F ++A+ TD+ P E+++ L+++A Sbjct: 131 FYFEWGKEDDLFEKPSSLAWVTDLGYVPTLVRERIRQARILVVEA 175 >gi|317121199|ref|YP_004101202.1| beta-lactamase domain-containing protein [Thermaerobacter marianensis DSM 12885] gi|315591179|gb|ADU50475.1| beta-lactamase domain-containing protein [Thermaerobacter marianensis DSM 12885] Length = 247 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 80/228 (35%), Gaps = 35/228 (15%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHG-------IDGLRGYFLK 101 G V++D GP ++ R V + AV Y+H H DH +D R + Sbjct: 25 EGPQGPVLLDCGPGVLARLRQRVDVPQLAAVFYSHYHPDHCSDHFVLRYVLDIARYLGCQ 84 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + P+ +Y L Y + P ++ + + AG +E Sbjct: 85 RPEPLPLYGPAR-PADLAGRMPY----------KDVFTPHFLDPGE---SVAIAGFDVEV 130 Query: 162 ----IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL----KNG 212 PI S+ G R V Y D A L +L + D L+I+A + Sbjct: 131 RATDHPIPCLASSWSAGGRR---VVYSGDTGPGAAAELVQLARGADLLLIEASLLARRGD 187 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 H + ++ + + +LTH+ + D VL V PA Sbjct: 188 RAPGHLTARQAAEIAREAGVRQLLLTHLLPEYDPQEVLAEAQE-VFPA 234 >gi|220916746|ref|YP_002492050.1| Ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1] gi|219954600|gb|ACL64984.1| Ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1] Length = 322 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 90/266 (33%), Gaps = 52/266 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G P P+ R S + R ++ D G Sbjct: 24 QEIRVTLLGTG---------------RPA-PEIDRFGPSTLVEAGGHR-----LLFDAGR 62 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR--GY----FLKQKRPIDVYAAPDC 114 ++ LR + +DAV TH H+DH+ G+ L G+ F ++ P+ ++ Sbjct: 63 GVTQRLWQLRIPLRDVDAVFLTHLHSDHVVGLPDLWLTGWLPTPFGRRAAPLSLWGPAGT 122 Query: 115 MK---HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR- 170 + L ++ + +A P I DV + ++ L HG Sbjct: 123 VDMVAALRRAYAWDLRARSGHQQLP-EAGTTIRARDVKQGVVYERDGVKVTAFLVDHGPH 181 Query: 171 -ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID------------ALKNGL 213 +LG+R +VA D + D L+ + A+ + Sbjct: 182 LRPALGYRVDHAGRSVAISGDTRPC-ENLVRFAAGTDVLVHEVAAARKELVERSAVVRSI 240 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H S ++ + + P+ A+ TH Sbjct: 241 LEVHTSPEDAGRVFTRVKPRLAVFTH 266 >gi|209879523|ref|XP_002141202.1| hypothetical protein [Cryptosporidium muris RN66] gi|209556808|gb|EEA06853.1| hypothetical protein, conserved [Cryptosporidium muris RN66] Length = 368 Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 102/346 (29%), Gaps = 99/346 (28%) Query: 6 HFTILGCGASLGVPRITGD--------------WGAC------------DPTN-PKNRRT 38 LG G G P + C KN R Sbjct: 4 SLLFLGTGTKEGTPNLGHTIKNIEYEHLNKGEYCSVCSKCIETLIRSNETSAEYNKNIRN 63 Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S +S S + S T++ + + Q + + +D +L H + I GID + Sbjct: 64 SYSALLSIKSNKSSEVTILFEISAEIRKSIIQCASKFLKKVDIILTMHSTEESIGGIDEV 123 Query: 96 RGYF-------------LKQKRPIDVYAAPDCMKHLFESFRYC----------FKALDDR 132 R K+PI +Y + +L + Y FK Sbjct: 124 REIQNFEHFIDENGNVSYYPKKPIPLYLSISAFINLSNWYNYMILYSLKIKPPFKTKVGT 183 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAI------------PILQQHGRISSLGFRFG- 179 + +P + A +E P+ ++ I+ F Sbjct: 184 MNISVFDPHNPGVTTTFKSINEANKYVEIHRYTNFEDNLDFSPVPFKYDSINITALYFKG 243 Query: 180 -----NVAY--------------CTDVNAFPAESLEKLQNL---DFLIIDALKNGLHSSH 217 N+ Y + + P ++ + L NL L++ L+ SH Sbjct: 244 NNNELNMGYVIQDEVSKNPILCILPNFSIIPQKTFQYLINLPCIQILVVPLLQ-----SH 298 Query: 218 ------FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 +++ E +K I+ +N LT + +D+ ++ +V Sbjct: 299 IKSEGAYNIPELIKFCLKISCRNVYLTSITCGIDHTLLGDYIRDQV 344 >gi|227120430|gb|ACP19311.1| PqqB [Rahnella aquatilis] Length = 303 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 103/319 (32%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ + C +N RT+SS+ +S V+ Sbjct: 1 MQIIVLGSAAGGGFPQWNCNCRNCQ--GVRNGTMKTSPRTQSSIAVSDNGTDW----VLC 54 Query: 59 DTGPDFYMQ------VLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q +++ VL I +++ T DH G+ LR Q V+ Sbjct: 55 NASPDICHQIAATPELIKHDVLRGTAIGSIILTDSQIDHCTGLLNLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ + L F F L + + I AIP+L Sbjct: 110 CTPEVHEDLTTGFP-IFTML--SHWNGGLQHHAIGPEKRFSVAVCPNLKFTAIPLLSNAP 166 Query: 170 RISSLGFRFG-----NVA-YCTDVN-----------AFPAES-LEKLQNLDFLIIDA--L 209 S +R N+A + D P + L+ L D L+ID Sbjct: 167 PYSK--YRGKPLPGHNIALFIEDTKTGTSLLYAPGLGEPDDELLKWLHKADCLLIDGTLW 224 Query: 210 KNGLHSS------------HFSLSES---LKKIELINPKNAILTHMHVDLDY-----DMV 249 ++ ++ H +L+E + + + + IL H++ Sbjct: 225 QDNELATTGVGRNTGKDMGHLALAEEQGLIALLSSLPAERKILIHINNTNPILNEASAER 284 Query: 250 LKSTPSRVVPAFDGMQFSS 268 T + ++DGM+ Sbjct: 285 QALTQQNIEVSWDGMRIEL 303 >gi|299136971|ref|ZP_07030154.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acidobacterium sp. MP5ACTX8] gi|298601486|gb|EFI57641.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acidobacterium sp. MP5ACTX8] Length = 301 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 101/314 (32%), Gaps = 65/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +F +LG A G+P+ CD + +++ + +++ PD Sbjct: 2 LNFKLLGTAAGGGIPQWNCACKLCDLCRKSPEIVQPRMQLQASFSADAENWFLINASPDL 61 Query: 65 YMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 MQ+ L ++ I ++ T D + G+ LR + P+ +YA Sbjct: 62 RMQIEAHPELQPSSRLGKRNTPIRGIILTSADLDQVLGVLLLREFQ-----PLTLYATAL 116 Query: 114 CMKHLF-ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG--- 169 + L SF F+ L P + + I P + GG I PI Q G Sbjct: 117 VRQVLEANSF---FRMLQ--RVPDQLTWVEIS----PQKSFTLGGGITCTPIPFQGGLPY 167 Query: 170 ----------RISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA---LKNG 212 ++LG +AY V E + D +++D Sbjct: 168 YARETHKEQPGQTTLGLLIESGGQRLAYTPSVPEVTDELRALYDSCDAILVDGTFWSDEE 227 Query: 213 LHSSHFSLSES--------------LKKIELINPKNAILTHMHVD---LDYDMVLKST-- 253 L S+H + L+ + + + + H++ LD Sbjct: 228 LSSTHAGTPLARSIGHVPMSGDDGTLRLLAGTSARQKVYVHINNTNPVLDPRSAEYKLVV 287 Query: 254 PSRVVPAFDGMQFS 267 + DG Q++ Sbjct: 288 DAGWQIGHDGWQWN 301 >gi|253583416|ref|ZP_04860614.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium varium ATCC 27725] gi|251833988|gb|EES62551.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium varium ATCC 27725] Length = 258 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 79/265 (29%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--- 65 ILG G+S +S+ I +++D G Sbjct: 5 ILGSGSSG-----------------------NSIFIE-----NDGIKLLIDAGFSCKKIE 36 Query: 66 --MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 ++ + + IDA+L TH H DHI G + +K I +Y P+ Sbjct: 37 EKLKCIDRDINEIDALLITHEHTDHIQG-----AGIISRKYDIPIYITPESYAA------ 85 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 + I + + I+ P H ++G+R Sbjct: 86 ------GENKLGKIADKNLKLITKDFFLKDG----IKVRPFDVMHDAERTIGYRLETECG 135 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----------------LKNGLHSSHFSLS 221 +A TD+ E + +D ++I+ + + H S + Sbjct: 136 KRMAISTDIGYVSNTVREYFKEVDIMVIECNYDYNMLMKCSYPWDLKARVKSRNGHLSNN 195 Query: 222 ESLKKIELI---NPKNAILTHMHVD 243 ++ + I+ + + L H+ D Sbjct: 196 DAARFIKDMYTERLRKVYLAHISKD 220 >gi|331004389|ref|ZP_08327862.1| ribonuclease Z [Lachnospiraceae oral taxon 107 str. F0167] gi|330411119|gb|EGG90538.1| ribonuclease Z [Lachnospiraceae oral taxon 107 str. F0167] Length = 303 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 98/323 (30%), Gaps = 85/323 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P R +S+ R +++D G Sbjct: 2 LDICLLGTGGMMPLP----------------YRWLTSMM-----ARCEGVNLLIDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPD 113 ++E+ ID + +TH HADHI G+ G L I Sbjct: 41 -QVAIKEKGWSPKPIDVICFTHFHADHISGLP---GLLLTMGNCEKTTPLLVIGPKGLER 96 Query: 114 CMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA------- 161 + + F F L + P IE V + G I Sbjct: 97 VVNAMRVIAPELPFEIQFHELKENEEVINFAPYKIEAYRVNHRVTCYGYRISIDRKGKFD 156 Query: 162 --------IPIL----QQHGRISSLG---F----------RFGNVAYCTDVNAFPAESLE 196 IP+ QHG + G + R V YCTD P E Sbjct: 157 AERAKALDIPLKYWNKLQHGETITDGEKVYTPNMVMGEARRGIKVNYCTDTRPVP-IIAE 215 Query: 197 KLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTH----MHVDLD 245 ++ D I + + +N H +++E+ + NPK LTH M+ + Sbjct: 216 YAKDCDLFICEGMYGEDEKEENAKGYKHMTMTEAANLGKEANPKRMWLTHYSPSMNKPDE 275 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 Y LK + A DG Sbjct: 276 YIENLKKIFPAIRTARDGWSIEL 298 >gi|289624769|ref|ZP_06457723.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650655|ref|ZP_06481998.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. aesculi str. 2250] gi|330871201|gb|EGH05910.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 303 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 98/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKIDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|309812104|ref|ZP_07705862.1| metallo-beta-lactamase domain protein [Dermacoccus sp. Ellin185] gi|308433791|gb|EFP57665.1| metallo-beta-lactamase domain protein [Dermacoccus sp. Ellin185] Length = 255 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 47/253 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P + +S + G T+V++D G Sbjct: 1 MKLTIIGCSGSYPGPE-----------------SPASCYLVEAEADGRRTSVLLDFGNGS 43 Query: 65 YMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 + R + V IDAV+ +H H DH +D Y ++ P + V+A + Sbjct: 44 LGALQRYREVDEIDAVVISHLHPDHC--LDLCSYYVVRNYDPLGRFDAKLPVHAPAGARE 101 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L Y +D + D+ G + P L H + + G Sbjct: 102 RLTR--AYAVDKPEDLG-------TAFDFVDLVDRQTFEIGPLRITPHLVNH-PVEAYGL 151 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFL-----IIDALKNGLHSSHFSLSESLKKI 227 R +AY D +A PA +E ++ D + +D + + H S S + + Sbjct: 152 RVEADGAVLAYTGDTDACPAL-VELERDADLVLTDSAFVDGRDDEMCGVHLSGSRAAQTA 210 Query: 228 ELINPKNAILTHM 240 + K +LTH+ Sbjct: 211 KDAGAKRLMLTHI 223 >gi|330968167|gb|EGH68427.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. actinidiae str. M302091] Length = 303 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 95/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPGRALRDTGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 + L F F+ L + +N IE + P+ Sbjct: 112 DMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAPPY 168 Query: 166 QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 H G G + Y + EK+++ D L++D Sbjct: 169 SPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPECAE 286 Query: 256 ----RVVPAFDGMQFSS 268 V AFDGM Sbjct: 287 LVRRNVEVAFDGMSIEL 303 >gi|170079393|ref|YP_001736031.1| ribonuclease Z [Synechococcus sp. PCC 7002] gi|254808678|sp|B1XN66|RNZ_SYNP2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|169887062|gb|ACB00776.1| tRNA 3' endonuclease RNase Z [Synechococcus sp. PCC 7002] Length = 317 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 93/301 (30%), Gaps = 95/301 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RARNVSGVALRLPQRAE--AWLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q+LR + I + TH H DHI G+ GL P+++Y P ++L Sbjct: 42 QHQLLRSDLRSSQISRIFITHMHGDHIFGLMGLIASMGLAGTGHPLEIYGPPGLEEYLRA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 +Y + + DR +V P ++ + + +H R+++ G+R Sbjct: 102 CEKYSYMRIGDRLRVHLVKPGLV----------FEDKEFQVTCLPLKH-RVTAFGYRVTE 150 Query: 179 ----------------------------GNVA------------------------YCTD 186 G V YCTD Sbjct: 151 KDRPGRFNLAKAQKLGIPPGPIYGDLKKGKVVTLDDGRKINGSDLCGQPEIGRKMVYCTD 210 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 F ++E Q+ D LI +A + H + + + + L K I+TH Sbjct: 211 TV-FCETAVELAQDADVLIHEATFAHKDAEMAFDRLHSTSTMAAQVALLAQVKQLIMTHF 269 Query: 241 H 241 Sbjct: 270 S 270 >gi|282891396|ref|ZP_06299895.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498681|gb|EFB41001.1| hypothetical protein pah_c161o002 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 265 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 32/177 (18%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G ++ L ++ IDA+ TH H DHI G+ R K I Sbjct: 21 PHTKILIDAGISGKRIKEELAQLNVELTDIDAIFITHEHTDHIQGL---RVLAYKLG--I 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A + K + E F C K G +E P Sbjct: 76 PVFANHETAKGIVECFHDCPK-----------------FKIFTTGESFLFGDLEVHPFSI 118 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 QH I +GF + +CTD+ + +LQN D+L ++A + H S Sbjct: 119 QHDTIDPVGFTIKTDQLKLGFCTDLGFVTSLVRHQLQNCDYLYVEA-NHQPSMVHAS 174 >gi|172038978|ref|YP_001805479.1| ribonuclease Z [Cyanothece sp. ATCC 51142] gi|254808625|sp|B1WQW1|RNZ_CYAA5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|171700432|gb|ACB53413.1| putative Ribonuclease Z [Cyanothece sp. ATCC 51142] Length = 312 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEV--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q+LR ++ I + TH H DHI+G+ GL +PI++Y P+ +L Sbjct: 42 QHQLLRSDVKISQITRIFVTHMHGDHIYGLTGLLASCGLAGSGQPIEIYGPPELKDYLKA 101 Query: 121 SFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y FK + PI I+ E+ + + L +H RI + G+R Sbjct: 102 CAKYSHFKLPHHIRFHPIHPGILYEDAEFSVSCN-----------LLKH-RIPAYGYRI 148 >gi|308186791|ref|YP_003930922.1| Coenzyme PQQ synthesis protein B [Pantoea vagans C9-1] gi|308057301|gb|ADO09473.1| Coenzyme PQQ synthesis protein B [Pantoea vagans C9-1] Length = 305 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 62/311 (19%), Positives = 100/311 (32%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C RT+SS+ +S E V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCHGVRNGTIQAQARTQSSIILSDNGEDW----VLCNASPDI 60 Query: 65 YMQVL------REQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+L R+ VL I ++ T DH G+ LR Q V+ P+ Sbjct: 61 GQQILHTPELTRKGVLRGTAIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L F F L + PI + +A +I P + Sbjct: 116 ADLSTGFP-IFPMLTHWNGGLQHRPIAPLTPFSVDVCTDLQFTAIPIISNAPPYSPYRDR 174 Query: 172 SSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--------- 212 G + Y + A L LQ D L+ID Sbjct: 175 PLPGHNVALFIENRANGQTLLYAPGLGEPDAVILPWLQKADCLLIDGTVWQDDELLTTGV 234 Query: 213 LHSS-----HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SRV 257 H++ H +L+E + + + K IL H++ ++ + +P + Sbjct: 235 GHNTGKAMGHLALAEEQGLMALLASLPAKRKILIHINNTNP--ILNEQSPQRQFLTEQGI 292 Query: 258 VPAFDGMQFSS 268 ++DGM Sbjct: 293 EVSWDGMAIHL 303 >gi|260682389|ref|YP_003213674.1| hypothetical protein CD196_0636 [Clostridium difficile CD196] gi|260685988|ref|YP_003217121.1| hypothetical protein CDR20291_0618 [Clostridium difficile R20291] gi|260208552|emb|CBA61219.1| conserved hypothetical protein [Clostridium difficile CD196] gi|260212004|emb|CBE02542.1| conserved hypothetical protein [Clostridium difficile R20291] Length = 291 Score = 77.9 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 95/288 (32%), Gaps = 41/288 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDT 60 I+G G +P C+ K R R SL I + +++DT Sbjct: 18 TLKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYI-------DDIKMLIDT 70 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR----GYFLKQKRPIDVYAAPDCMK 116 D + R+++ + + +H DH+ GI + + + PI YA P+ ++ Sbjct: 71 PEDITVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIE 130 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + C K D ++N I I +I P + Sbjct: 131 DINRTNLDCLKYYGD-----VINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENE 185 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLII----------DALKNGLHSSH---FSLSES 223 + V Y N P + + D LII D K F+L E Sbjct: 186 K--KVIYAC-CNPKPFTHSDMYFDADVLIISLVSDDGILNDGTKLEDTPFKDEIFTLDEI 242 Query: 224 LKKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 ++ K I+TH+ Y + K + A+DGM+ Sbjct: 243 VEIKNYYRIKKIIITHIDEMWGKSYGYYSELEKKL-DNIYFAYDGMEI 289 >gi|300113208|ref|YP_003759783.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus watsonii C-113] gi|299539145|gb|ADJ27462.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus watsonii C-113] Length = 309 Score = 77.9 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 100/320 (31%), Gaps = 75/320 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G P+ + C+ RT+SS+ S V+ +T PD Sbjct: 5 VLGSGAGGGFPQWNCNCHNCNRLRKGKFKGQARTQSSIAASTNGTDW----VLFNTSPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I ++ DH G+ LR + RP+DVY Sbjct: 61 LGQLQHFPAIQPGRALRDTGIRGIVLLDSQIDHTTGLLMLR----EHHRPLDVYCTESVH 116 Query: 116 KHLFESFRYCFKALDDRT---YPPIVNPIVIENNDVPICMKSAGGVIEAIPI-------- 164 + L FK LD + PI P + AG + +P+ Sbjct: 117 QDLTTGNP-LFKVLDHYCTVNWHPIRLPQGDAPGEDFQVEGIAGLRLTPVPLRSEAPPYS 175 Query: 165 --LQQHGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + ++G R + A Y + L ++ D L+ID Sbjct: 176 PHRHNYHVGDTIGLRLEDPATQKNLFYAPGLGQIEDHVLSLMEKADCLLIDGTFWTEDE- 234 Query: 217 HFSLSESLKKIELI---------NPK------------NAILTHMHVDLDYDMVLKSTPS 255 + ++ + P IL H++ ++ + +P Sbjct: 235 ---MEQAGITQKRATEMGHLPQSGPGGMMSVLAPLTNLRKILIHINNTNP--ILDEKSPE 289 Query: 256 -------RVVPAFDGMQFSS 268 + AFDGM+ + Sbjct: 290 RTQLEAAGIQVAFDGMEITL 309 >gi|283768806|ref|ZP_06341717.1| putative ribonuclease Z [Bulleidia extructa W1219] gi|283104592|gb|EFC05965.1| putative ribonuclease Z [Bulleidia extructa W1219] Length = 303 Score = 77.9 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 92/294 (31%), Gaps = 84/294 (28%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGID 93 +R +SL I ++D G + + + + ID ++ TH HADH G+ Sbjct: 17 KRWLTSLYIKLRG-----KATLIDCGEGTQIALQEQGLSLKQIDTIILTHYHADHTAGLP 71 Query: 94 GLR--GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 GL + PI +Y + + L R P VN I I+ + V Sbjct: 72 GLLLTMAKNNRLEPIRIYGPKGLKEVIQG------VTLLARFIPFEVNCIEIDGHSV--- 122 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFG-------------------------------- 179 + ++ H + LG+RF Sbjct: 123 --FSLEELQVQAFPLIHS-VECLGYRFDLKRKPKFLVEKAKALNLPVQYWSKLQKGETVL 179 Query: 180 -------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGL 213 ++ Y TD + + LQ D LI + ++N Sbjct: 180 FEGKEILPSAVLGNERKGISLVYATDTRPTSSLVRQALQ-ADLLIAEGMYGDVEKIENAQ 238 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPAFDG 263 + H + E+ + K+ LTH + Y+ +LK V + DG Sbjct: 239 MNKHMMMQEACDIAQKCGVKDLWLTHYSPSMPFPSIYEKMLKEIYPNVKISQDG 292 >gi|299821603|ref|ZP_07053491.1| ribonuclease Z [Listeria grayi DSM 20601] gi|299817268|gb|EFI84504.1| ribonuclease Z [Listeria grayi DSM 20601] Length = 343 Score = 77.9 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 96/304 (31%), Gaps = 82/304 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K LG GA G+P R +S+ +S + ER + + D G Sbjct: 37 KIIMELIFLGTGA--GLPS--------------KSRNVTSIALSLLDER--KSIWLFDCG 78 Query: 62 PDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAP---- 112 Q+L+ ++ ++ + TH H DHI G+ GL R + K ++PI +Y Sbjct: 79 EATQHQILKSTIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGK-EKPITIYGPKGIQE 137 Query: 113 -------------------------------------DCMKHLFESFRYCFKALDDRTYP 135 D + H S+ Y D Sbjct: 138 YVESALRLSGTHLSYTIAFEEIEPGLLFDDDTFSVSCDLLDHGIASYGYRIVQKDKPGAL 197 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVNA 189 I PI G + + GR G +A D Sbjct: 198 YAEKLQEIGVPPGPIFQAIKKGE----SVELEDGRTIDGSDYIGPSQAGKIIAIYGDTRQ 253 Query: 190 FPAESLEKLQNLDFLIIDA-----LKNGLH-SSHFSLSESLKKIELINPKNAILTHMHVD 243 P SLE +N D ++ +A L+ H H + ++ + + K I+TH+ Sbjct: 254 IP-ASLELGENADVIVHEATFEAGLEKLAHEYMHSTTHQAAELAKKTGAKRLIITHISAR 312 Query: 244 LDYD 247 D + Sbjct: 313 YDKE 316 >gi|46908204|ref|YP_014593.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b F2365] gi|47093300|ref|ZP_00231070.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|226224575|ref|YP_002758682.1| hypothetical protein Lm4b_01989 [Listeria monocytogenes Clip81459] gi|254825533|ref|ZP_05230534.1| ribonuclease Z [Listeria monocytogenes FSL J1-194] gi|254931857|ref|ZP_05265216.1| ribonuclease Z [Listeria monocytogenes HPB2262] gi|56749436|sp|Q71Y44|RNZ_LISMF RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494137|sp|C1KWS1|RNZ_LISMC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|46881474|gb|AAT04770.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018320|gb|EAL09083.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225877037|emb|CAS05746.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583409|gb|EFF95441.1| ribonuclease Z [Listeria monocytogenes HPB2262] gi|293594775|gb|EFG02536.1| ribonuclease Z [Listeria monocytogenes FSL J1-194] gi|328466318|gb|EGF37475.1| ribonuclease Z [Listeria monocytogenes 1816] Length = 306 Score = 77.9 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 104/317 (32%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA----PDCMK 116 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 117 HLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVI------------- 159 L S ++ P + ++ +D+ ++S G I Sbjct: 103 SLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSFGYRIVEKDKQGALNAEK 162 Query: 160 ------EAIPILQ--QHGRISSL--GFRFGNVAYC------------TDVNAFPAESLEK 197 EA P+ Q ++G I +L G Y D A LE Sbjct: 163 LKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTKE-TANELEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 N D L+ +A G + H + ++ + N K ILTH+ D D + Sbjct: 222 ALNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKTANVKKLILTHISSRYDRDASKE 281 Query: 252 STP------SRVVPAFD 262 A+D Sbjct: 282 LLIEAKTIFENTEIAYD 298 >gi|325068395|ref|ZP_08127068.1| hypothetical protein AoriK_11255 [Actinomyces oris K20] Length = 265 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT----TVIVDT 60 TI+GC S+ P+ SS + ++++D Sbjct: 1 MRLTIIGCSGSMSGPQ--------SSA--------SSYLVQADGVDADGAVRTYSIVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCM 115 GP Q+LR +DA+ +H HADH+ + G+ Y P+ + + Sbjct: 45 GPGSMGQLLRHLDPAELDAIAISHCHADHMVDLVGMHVYRRWLPTGALGPVACLGPSELL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRISSL 174 + L PP + +S + G + P H + + Sbjct: 105 ERLQ----------GVDGVPPSERYATEFGFVTAVPGRSYSVGPLVISPFEALH-PVEAY 153 Query: 175 GFRFG-----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFS 219 G+R ++A+ D + Q +D L+ +A ++ + H + Sbjct: 154 GYRIEGPSEEDPSRQVSLAFTGDT-DICQTMSDMAQGVDLLLAEAAFVEGRDTVGGMHMT 212 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 213 GRRAGELAAQAGAGHLVLTHI 233 >gi|254852872|ref|ZP_05242220.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|300763718|ref|ZP_07073715.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|258606206|gb|EEW18814.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|300515454|gb|EFK42504.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] Length = 306 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 105/317 (33%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA----PDCMK 116 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 117 HLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVI------------- 159 L S ++ P + ++ +D+ ++S G I Sbjct: 103 SLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSFGYRIVEKDKQGALNAEK 162 Query: 160 ------EAIPILQ--QHGRISSL--GFRFGNVAYC------------TDVNAFPAESLEK 197 EA P+ Q ++G I +L G Y D A LE Sbjct: 163 LKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTKE-TANELEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 N D L+ +A G + H + ++ K + N K ILTH+ D D + Sbjct: 222 ALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHISSRYDRDASKE 281 Query: 252 STP------SRVVPAFD 262 A+D Sbjct: 282 LLIEAKTIFENTEIAYD 298 >gi|326773724|ref|ZP_08233007.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces viscosus C505] gi|326636954|gb|EGE37857.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces viscosus C505] Length = 265 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT----TVIVDT 60 TI+GC S+ P+ SS + ++++D Sbjct: 1 MRLTIIGCSGSMSGPQ--------SSA--------SSYLVQAEGVDADGAVRTYSIVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCM 115 GP Q+LR +DA+ +H HADH+ + G+ Y P+ + + Sbjct: 45 GPGSMGQLLRHLDPAELDAIAISHCHADHMVDLVGMHVYRRWLPTGALGPVACLGPSELL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRISSL 174 + L PP + +S + G + P H + + Sbjct: 105 ERLQ----------GVDGVPPSERYATEFGFVTAVPGRSYSVGPLVISPFEALH-PVEAY 153 Query: 175 GFRFG-----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFS 219 G+R ++A+ D + Q +D L+ +A ++ + H + Sbjct: 154 GYRIEGPSEEDPSRRVSLAFTGDT-DICQTMSDMAQGVDLLLAEAAFVEGRDTVGGMHMT 212 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 213 GRRAGELAAQAGAGHLVLTHI 233 >gi|301382358|ref|ZP_07230776.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. tomato Max13] gi|302062932|ref|ZP_07254473.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. tomato K40] gi|302130689|ref|ZP_07256679.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 303 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 95/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRAMRDTGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 + L F F+ L + +N IE + P+ Sbjct: 112 DMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAPPY 168 Query: 166 QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 H G G + Y + EK+++ D L++D Sbjct: 169 SPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPERAE 286 Query: 256 ----RVVPAFDGMQFSS 268 V AFDGM Sbjct: 287 LVRRNVEVAFDGMSIEL 303 >gi|221195136|ref|ZP_03568192.1| beta-lactamase domain protein [Atopobium rimae ATCC 49626] gi|221185039|gb|EEE17430.1| beta-lactamase domain protein [Atopobium rimae ATCC 49626] Length = 276 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 56/226 (24%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKR 104 G T+++VD G + R + L ID AV TH H+DH+ G+ + Sbjct: 22 EGPQTSILVDCGLSRRELLRRSKELDIDTDCIAAVFITHEHSDHVGGLR-----VFAKHF 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++A L ++D +E + + ++ G I Sbjct: 77 DGPIFATSGTAHILSGR-----SSMDG-----------VEFSLISTDVQKCVGEISVQAF 120 Query: 165 LQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H +GFRF ++ YCTD ++L +L L +++ Sbjct: 121 STSHDVAEPVGFRFSLLGEKNLEIDSIGYCTDTGILTDDALTELAGARILALESNHDEHM 180 Query: 209 LKNGLHS-----------SHFSLSESL-KKIELINP-KNAILTHMH 241 L G + H S ++ ELI P + MH Sbjct: 181 LATGPYPQVLKERVGGPYGHLSNEQAASALAELIRPNTRTV-VGMH 225 >gi|182680224|ref|YP_001834370.1| coenzyme PQQ biosynthesis protein B [Beijerinckia indica subsp. indica ATCC 9039] gi|182636107|gb|ACB96881.1| coenzyme PQQ biosynthesis protein B [Beijerinckia indica subsp. indica ATCC 9039] Length = 299 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 102/321 (31%), Gaps = 83/321 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ C ++ RT+SSL +S R ++++ Sbjct: 1 MRVLVLGSAAGGGFPQWNCRCPVCRLAWAGDKRVTPRTQSSLAVSADGVRW----LLLNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L +E I V T+ DH+ G+ L++++ ++ Sbjct: 57 SPDLRQQILANTAVQPQEGNRHSPIAGVFLTNGDIDHLAGL-----LTLREQQAFTIFGT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK-SAGGVIEAIPILQQHGR 170 + + + ++N ++ + + + G + G+ Sbjct: 112 GATLAEIAA-----------GSVFGVLNKDLVSTQKIALDVPCDTGLGLTVTAFAVP-GK 159 Query: 171 IS----------------SLGFRFGNVA----YCTDVNAFPAESLEKLQNLDFLIID--- 207 + +LG + A Y A + + +++ D L D Sbjct: 160 VPLYLEGEKVQIGELSESTLGLEITDGAKRFFYIPGCAAVTDQVIARIKGADLLFFDGTT 219 Query: 208 ---------------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 A + G H + SL+++ I H++ +++ Sbjct: 220 FTDREMVDLGLSQKTAWRMG-HVAMSGEEGSLRRLADCGIGRKIYIHINNTNP--VLIDD 276 Query: 253 TPS-------RVVPAFDGMQF 266 +P A+DGM+ Sbjct: 277 SPERASVEKAGWQVAYDGMEV 297 >gi|218892056|ref|YP_002440923.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas aeruginosa LESB58] gi|226704958|sp|B7VAB9|PQQB_PSEA8 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|218772282|emb|CAW28064.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa LESB58] Length = 304 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 102/321 (31%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDEGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFPML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 H G G Y + LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGTLFYAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD---LDYDMV 249 K G H L++S L+ + + +L H++ LD Sbjct: 226 RDDEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTASA 283 Query: 250 LKST--PSRVVPAFDGMQFSS 268 ++ S + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|317124456|ref|YP_004098568.1| metal-dependent hydrolase, beta-lactamase superfamily III [Intrasporangium calvum DSM 43043] gi|315588544|gb|ADU47841.1| metal-dependent hydrolase, beta-lactamase superfamily III [Intrasporangium calvum DSM 43043] Length = 255 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 90/275 (32%), Gaps = 47/275 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P D +S + R G ++++D G Sbjct: 1 MDLTIVGCSGSFAGP---------DS--------PASSYLVRSEHEGRTWSIVLDLGNGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIH---GIDGLRGYFLKQKRP--IDVYAAPDCMKHL 118 + R L++DAVL +H H DH G+ + Y + Y HL Sbjct: 44 LGHLQRHVDPLTVDAVLVSHLHVDHCIDLCGLYVMLKYVPGGSGREGLPAYGPEGTGDHL 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ + P + + + + + G P+ +H I + GFR Sbjct: 104 VRAYG----NEEIEDVPGVFDFRTFTDREPVVV-----GPFTITPVRVEH-PIEAYGFRV 153 Query: 179 GN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELI 230 + Y D + A + + D ++ DA ++ + H S S + + Sbjct: 154 EADGRVLVYTGDTDLCDALT-PLMTGADLVLADAAFVDGRDEVRGIHLSGSRAAEAAVRA 212 Query: 231 -NPKNAILTHMHVDLD----YDMVLKSTPSRVVPA 260 + +LTH+ D P V A Sbjct: 213 GGVQRLMLTHLPAWNDPEQCRAQAAAVWPGEVELA 247 >gi|312127818|ref|YP_003992692.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777837|gb|ADQ07323.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 240 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 84/224 (37%), Gaps = 35/224 (15%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G ++L I ++ +H HADH + LR YF + + ID+Y + Sbjct: 30 NILLECGSGVLTRLLNFISFDEISFIICSHLHADHTSDLGVLRYYFASRGKEIDLYIPSE 89 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + ++ + Y IENN M++ G + + QH S Sbjct: 90 PKEE--------YELIRKGVYR----VRDIENN-----MEAKIGNLTIKFLEGQH-PYKS 131 Query: 174 LGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSSHFSLS 221 R + D F E +E +N D L+++A H S Sbjct: 132 FAVRIEEDGKIFGFSGDT-GFKEELIEFFRNADLLLLNAAYTDKEVEKIEPEKRFHLSPK 190 Query: 222 ESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFD 262 ++ + + N K +LTH+ + ++ + K VV A D Sbjct: 191 QAAEITKKANAKLLVLTHLKPECNEKEHLLSAKEVFENVVLAAD 234 >gi|302206778|gb|ADL11120.1| Metal-dependent hydrolase [Corynebacterium pseudotuberculosis C231] gi|302331331|gb|ADL21525.1| Metal-dependent hydrolase [Corynebacterium pseudotuberculosis 1002] gi|308277023|gb|ADO26922.1| Metal-dependent hydrolase [Corynebacterium pseudotuberculosis I19] Length = 265 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 88/286 (30%), Gaps = 49/286 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILG SLG P N + + + + ++++D GP Sbjct: 9 KNMKLTILGSSGSLGAP--------------DNAAS------GYLIQMDNAPSILMDMGP 48 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKH 117 Q+ R Q S V+++H HADH L + K + D Sbjct: 49 GVLAQLERAQNPSDAHVVFSHLHADHCVDFPSLLVWRRYHPTAAAKGRNLCFGPTDTPVR 108 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L +DD + + G + P H I S R Sbjct: 109 LGRLSADSVDNIDDMS-------DTFAFTPWQNAKEELVGAVSITPYSVVH-PIESFALR 160 Query: 178 FGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKK 226 + VAY D +++ +E ++ D + +A + H S E+ + Sbjct: 161 VEHKRSGKVVAYSGD-SSYTENLIECARDADVFLCEATWGETSEGKVPNMHMSGEEAGRI 219 Query: 227 IELINPKNAILTHM----HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + K IL H+ + + V ++ GM+ Sbjct: 220 ARIAGAKRLILVHIPPWGNAKAALEKARSEFDGPVDISYQGMEIHI 265 >gi|73749401|ref|YP_308640.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] gi|289433359|ref|YP_003463232.1| metallo-beta-lactamase family protein [Dehalococcoides sp. GT] gi|73661117|emb|CAI83724.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1] gi|288947079|gb|ADC74776.1| metallo-beta-lactamase family protein [Dehalococcoides sp. GT] Length = 257 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 84/255 (32%), Gaps = 54/255 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIVDTGP 62 T LG G + R S +I ++D GP Sbjct: 9 SLTFLGTGGA---------------------RFMVSRQILASGGIWLNLDGKRFLIDPGP 47 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPIDVYAAPDCM 115 +QV R + + A+L +H H DH ++ + +G F K + A D Sbjct: 48 GSIVQVCRLGLDPEKLSAILLSHRHLDHSGDVNVMIEAMTQGGFKKHGHFL---APKDAF 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + Y P +N + + + I+ + + + G Sbjct: 105 DNEPVIYSYL---------KPFLNDLTMLEEGREYNLDG----IKVFTTRRHQHPVETYG 151 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIEL 229 F F + Y +D F E + D LII+ + H S+ ++ K I Sbjct: 152 FIFESSSHRIGYVSDTRYF-EEMPQVYAGCDVLIINVVLKEAIERIYHLSIPDAAKLITA 210 Query: 230 INPKNAILTHMHVDL 244 PK AILTH + L Sbjct: 211 AKPKTAILTHFGLQL 225 >gi|15597182|ref|NP_250676.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas aeruginosa PAO1] gi|32129919|sp|Q9I2C3|PQQB_PSEAE RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|9947987|gb|AAG05374.1|AE004625_4 pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa PAO1] Length = 304 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 102/321 (31%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFPML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 H G G Y + LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGALFYAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD---LDYDMV 249 K G H L++S L+ + + +L H++ LD Sbjct: 226 RDDEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTASA 283 Query: 250 LKST--PSRVVPAFDGMQFSS 268 ++ S + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|297199999|ref|ZP_06917396.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|197710471|gb|EDY54505.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 250 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 82/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R PI VY Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCDPIPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + I G H + + G Sbjct: 98 RLTTAYA---DTPTASSMSEVFDFHTVKPSTFDI------GPFTVHTERVAH-PVEAYGI 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D PA + E ++ D + +A K + H + E+ + Sbjct: 148 RVEHGGKSLTYSGDTGLSPALT-ELARDTDLFLCEAAFTHGKENIPDLHLNGREAGETAT 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLVLTHI 218 >gi|150398775|ref|YP_001322542.1| ribonuclease Z [Methanococcus vannielii SB] gi|166991486|sp|A6UN58|RNZ_METVS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150011478|gb|ABR53930.1| ribonuclease Z [Methanococcus vannielii SB] Length = 315 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 99/306 (32%), Gaps = 89/306 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R+ S+ + E + D G + Sbjct: 1 MKLTFLGTGAAV----------------PTKYRSHPSVALKFDGEI-----FLFDCGENT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q++ V I+ + +H H DHI GI GL F +K+P+++Y P+ + + Sbjct: 40 QRQIIFTDVSPMKINNIFISHLHGDHILGIPGLLQSIAFQGRKKPLNIYGPPETKEMIKN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENND--VPICMKSAGGVIEAIPILQQHG--------- 169 + + ++D YP ++ IE+ + + S G E +H Sbjct: 100 MLKIGYHSID---YPINIHEASIESPEMIIASSNNSNGNNYEVYTFPVKHSVPSISYLFK 156 Query: 170 ----------RISSLGFRFGN---------------------------------VAYCTD 186 + +LG G + Y D Sbjct: 157 QIKKPQMDIKKAETLGIEIGPDLKKLKDGFSIQLKNGKVITPKDVTIPPKKGYCIGYSGD 216 Query: 187 VNAFPA-ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH 239 K + LI +A KN + + H ++ ++L +E + I TH Sbjct: 217 TIPIDEFGKFLKYHGCNVLIHEATFDSSMQKNAVDTMHSTILDALDILEKSGARTLIATH 276 Query: 240 MHVDLD 245 + D Sbjct: 277 ISARYD 282 >gi|78043784|ref|YP_359182.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995899|gb|ABB14798.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 242 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 76/245 (31%), Gaps = 44/245 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC + P G SS + T+++D G Sbjct: 1 MRLTVLGC-WAP-FPAPGGAT--------------SSYLLET-----EKATILIDAGSGA 39 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +L+ +DAV+ +H H DH + LR + + + + Sbjct: 40 VANLLKWGQPEKLDAVVLSHWHEDHTADLPILRYLVRSLF-----FTGKRT-EKVKLFYP 93 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--- 180 + D Y I I+ + + G + H + S GF+F N Sbjct: 94 ESPERPDMSKYQEFFELIPIKEGEFLDIKELKGWAVT-----NSHQAL-SYGFKFTNGVK 147 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-----HFSLSESLKKIELINPKN 234 Y D P + E +D L+ + SS H + E + KN Sbjct: 148 TFGYTGDTGYLPKHA-EFFYGVDLLLAECTGFKKDSSYTQNNHLTTEECALLAKNAKAKN 206 Query: 235 AILTH 239 +TH Sbjct: 207 LAVTH 211 >gi|71733653|ref|YP_276807.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. phaseolicola 1448A] gi|123634846|sp|Q48CT6|PQQB_PSE14 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|71554206|gb|AAZ33417.1| coenzyme PQQ biosynthesis protein B [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326444|gb|EFW82497.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. glycinea str. B076] gi|320331584|gb|EFW87522.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. glycinea str. race 4] gi|330872307|gb|EGH06456.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. glycinea str. race 4] Length = 303 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 96/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + + IE + P+ Sbjct: 110 CTEMVHEDLSTGFP-LFEMLKH--WNGGLTWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|330956952|gb|EGH57212.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. maculicola str. ES4326] Length = 303 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 94/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRAADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV-----DLDYDMVLK 251 + H + L+ +E + +L H++ D D + Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPDQRKVLIHINNTNPILDEDSSERAE 286 Query: 252 STPSRVVPAFDGMQFSS 268 V A+DGM Sbjct: 287 LVRRNVEVAYDGMSIEL 303 >gi|107101414|ref|ZP_01365332.1| hypothetical protein PaerPA_01002454 [Pseudomonas aeruginosa PACS2] gi|116049937|ref|YP_791253.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas aeruginosa UCBPP-PA14] gi|254235070|ref|ZP_04928393.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa C3719] gi|254240423|ref|ZP_04933745.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa 2192] gi|122259051|sp|Q02LD3|PQQB_PSEAB RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|115585158|gb|ABJ11173.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa UCBPP-PA14] gi|126167001|gb|EAZ52512.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa C3719] gi|126193801|gb|EAZ57864.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa 2192] Length = 304 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 102/321 (31%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFPML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 H G G Y + LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGTLFYAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD---LDYDMV 249 K G H L++S L+ + + +L H++ LD Sbjct: 226 RDDEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTASA 283 Query: 250 LKST--PSRVVPAFDGMQFSS 268 ++ S + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|237736710|ref|ZP_04567191.1| Zn-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] gi|229420572|gb|EEO35619.1| Zn-dependent hydrolase [Fusobacterium mortiferum ATCC 9817] Length = 259 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 50/224 (22%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N +++D G + +++ + I+ +L TH H DHI G + +K Sbjct: 18 ESENGKILIDAGFSCKKIEERLSIIQRDISDINGILITHEHIDHIQG-----AGIISRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y P+ FKA + + + +N+ I + P Sbjct: 73 NVPIYITPES-----------FKAGESKLGKIAAENLRFIDNEKFIIND----SLLVKPF 117 Query: 165 LQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----------- 208 H ++G+R + A TD+ E + +D ++I++ Sbjct: 118 DVMHDACRTVGYRIESQNGKVAAISTDIGYVNNIVRENFKEVDIMVIESNYDYNMLMNCN 177 Query: 209 ------LKNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E+ K I+ + K L H+ D Sbjct: 178 YPWDLKARVKSRNGHLSNNEAAKFIKEMYNEKLKKVYLAHISKD 221 >gi|307595529|ref|YP_003901846.1| beta-lactamase domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550730|gb|ADN50795.1| beta-lactamase domain-containing protein [Vulcanisaeta distributa DSM 14429] Length = 250 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 82/244 (33%), Gaps = 45/244 (18%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL 69 LG G + P + SL + N+ +++D G Y + L Sbjct: 6 LGTGGWVSNPLLG----------------NVSLLVEV-----GNSRILIDAGEGAY-RAL 43 Query: 70 R---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 R V +D VL TH H DH+ G+ L + + + VY D L F Sbjct: 44 RMCGFDVNDLDLVLITHRHGDHVMGLSTLALFARSKGVMLKVYGPRDV--DLQR----LF 97 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----V 181 AL Y + I+ + P+ + +L H + +L +R + Sbjct: 98 DALGIPQYLSAIEFHPIDPSPEPLTVLIT-HDYRITAVLADH-TVQTLAYRIDATDGSCI 155 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNA 235 Y +D + + LI +A + H H + SES++ K Sbjct: 156 TYSSDTRP-TKNIVNLAKGCTLLIHEASGNPGTEEASHLHGHSTTSESIQIAREAGVKYL 214 Query: 236 ILTH 239 + H Sbjct: 215 MPIH 218 >gi|266624223|ref|ZP_06117158.1| VicX protein [Clostridium hathewayi DSM 13479] gi|288863945|gb|EFC96243.1| VicX protein [Clostridium hathewayi DSM 13479] Length = 265 Score = 77.5 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-PDFY-MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ ++VD G + Q L E + +D ++ TH H+DH G+ L +K + Sbjct: 20 DHSHILVDAGISNKRIEQGLNEIGLKGSELDGIVITHEHSDHTKGLG-----VLARKYGV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + + +Y + + +P + + G +E P Sbjct: 75 PLYGTKETLDEVSKQ-KYLGEYPRELYHPISPD------------VDFFIGDLEVKPFSI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H + + +R +VA TD+ + ++ LQ LD L++ + L+ G + Sbjct: 122 DHDAANPVAYRIQHDHKSVAVATDMGHYDQYIIDHLQGLDALLLESNHDVNMLQAGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N K +L H+ + +Y+ + T Sbjct: 182 YLKRRILGDHGHLSNENAGRLLCCILHDNLKRILLGHLSKENNYEELAYET 232 >gi|284049123|ref|YP_003399462.1| hypothetical protein Acfer_1793 [Acidaminococcus fermentans DSM 20731] gi|283953344|gb|ADB48147.1| conserved hypothetical protein [Acidaminococcus fermentans DSM 20731] Length = 261 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 50/220 (22%) Query: 50 RGSNTTVIVDTGPDFYM--QVL-REQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T +++D G Q L R + + V TH H DHI G+D F + Sbjct: 23 RAGQTAILIDAGISCRRIVQGLKRCGLEPEDLSGVFLTHEHRDHIAGLD----VFARHYD 78 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V+A+ L R P VI G + P Sbjct: 79 SVPVFASEKTWAQL-----------PVRRQLPRPQVRVI-------PRSCTMGNLRIEPF 120 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ Y TD + + ++++A L+NG + Sbjct: 121 RIPHDAADPVGYAIFNGDEKCTYLTDCGVITRTVEQAAEGASVMVLEANHDETMLRNGPY 180 Query: 215 S-----------SHFSLSESLKKIELIN--PKNAILTHMH 241 H S + + + + P IL H+ Sbjct: 181 PVALQNRILGREGHLSNRTAGQFLASLAEPPTEVILAHLS 220 >gi|213967721|ref|ZP_03395868.1| coenzyme PQQ synthesis protein B [Pseudomonas syringae pv. tomato T1] gi|213927497|gb|EEB61045.1| coenzyme PQQ synthesis protein B [Pseudomonas syringae pv. tomato T1] Length = 303 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 95/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRAMRDTGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 + L F F+ L + +N IE + P+ Sbjct: 112 DMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAPPY 168 Query: 166 QQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 H G G + Y + EK+++ D L++D Sbjct: 169 SPHRFDPHPGDNIGLLIEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPERAE 286 Query: 256 ----RVVPAFDGMQFSS 268 V AFDGM Sbjct: 287 LVRRNVEVAFDGMSIEL 303 >gi|116329497|ref|YP_799217.1| beta-lactamase superfamily hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329907|ref|YP_799625.1| beta-lactamase superfamily hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122241|gb|ABJ80284.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123596|gb|ABJ74867.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 312 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 87/242 (35%), Gaps = 31/242 (12%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAV--LYTH 83 D +P RT + S I+D G +L E + D++ L TH Sbjct: 50 DSLDPSLSRTVGGNTTCVFIQAQSGERYIIDCGSGMRQLGNDLLAEGLKPGDSIHILITH 109 Query: 84 PHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H DHI G + + I Y+ P+ + L + + Sbjct: 110 THWDHIQGWMFFKPAYFP-GIDIHFYSTIPNLQERLERQQNEEHFPVPLSGMMSQKTFHL 168 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDV-NAFPA-ESLE 196 +E N + G I+ P L +H + GFRF + +CTDV P E Sbjct: 169 LERNK-----NTNIGSIKVTPFLLRHPG-NCTGFRFEEQGKSFLFCTDVEVQEPDLEEFF 222 Query: 197 KLQNL----DFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 +L+ D LIIDA + + H S ++ E++ K +LTH + D+ Sbjct: 223 ELKKSFGETDMLIIDAQYSSEEAEKKVGWGHTSGKVAICCGEILGAKRLVLTH--HEPDH 280 Query: 247 DM 248 Sbjct: 281 RD 282 >gi|163851421|ref|YP_001639464.1| beta-lactamase domain-containing protein [Methylobacterium extorquens PA1] gi|163663026|gb|ABY30393.1| beta-lactamase domain protein [Methylobacterium extorquens PA1] Length = 243 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 81/275 (29%), Gaps = 43/275 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + G G + C ++D G Sbjct: 1 MRLHVLGCGDAFG---SGGRFNTC------------------FHFDAPGGAFLIDCGASA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 + + R V I V TH H DH G+ L + + V P + L Sbjct: 40 LIAIRRFGVEPNRIRTVFLTHLHGDHFGGLPWLILDGQLVSGRTESLTVVGPPGTAERLP 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRF 178 + F V + +E G + A +H + R Sbjct: 100 AAMEVLFPGSSTAERRFRVEVVEMEAGR-----PVETGGVRATAFTMRHPSGAPAHALRI 154 Query: 179 GN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-HFSLSESLKKIELINPK 233 V+Y D + + + D +I + H + +++ I PK Sbjct: 155 EAAGKVVSYTGDTEWV-EDIVAAGRGADLMIAEGYTVERRVKFHLDWATLKRRLPEIAPK 213 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTHM ++ + P + A DG+ + Sbjct: 214 RLMLTHMSPEM-----IAHPPDGYIAAEDGLVLTL 243 >gi|237740267|ref|ZP_04570748.1| metal dependent hydrolase [Fusobacterium sp. 2_1_31] gi|229422284|gb|EEO37331.1| metal dependent hydrolase [Fusobacterium sp. 2_1_31] Length = 259 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 88/232 (37%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++++ +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEMIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + K + ++ +I+ D + ++ P Sbjct: 75 PIYITSESYKA-------------GVSKLGEIDKSLIKFIDGSFILDD---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLESQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCSYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + + H S +E K I+ + K L H+ D ++ ++K T Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKDSNHLSIIKET 230 >gi|117618007|ref|YP_855738.1| ribonuclease Z, putative [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559414|gb|ABK36362.1| ribonuclease Z, putative [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 346 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 94/268 (35%), Gaps = 52/268 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D + ++LG G VP+I+ R S + N ++ D G Sbjct: 47 DIFRVSLLGTGTP--VPQIS--------------RGGYSTLVEA-----GNQKLVFDFGR 85 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDC 114 + ++ L + ++A TH H+DH +G+ L + ++ P+++Y Sbjct: 86 NSATRLWQLHIPIGRVNAFFLTHFHSDHTNGLADLWLTGWLQPAYGQRHAPMELYGPRGT 145 Query: 115 ---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L +++ P ++ + I +++V + ++ HG Sbjct: 146 DALAHGLQQAYATDIATRVKDEGTP-LDGVKINSHEVTAGVVYDQDGVKVTAFDNDHGVN 204 Query: 172 --SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLHS----- 215 S G+R +V D + + +++ + D L+ A + + Sbjct: 205 IKPSFGYRIDYHGHSVVLSGDT-RYSPQVVKEAKGADLLVHCVSMTSAARMKANPGYRAI 263 Query: 216 -SHF-SLSESLKKIELINPKNAILTHMH 241 H S ++ + + P + +H+ Sbjct: 264 AGHLASPEQAARVLNEAKPALTVFSHIG 291 >gi|288925045|ref|ZP_06418981.1| metallo-beta-lactamase superfamily protein [Prevotella buccae D17] gi|288338235|gb|EFC76585.1| metallo-beta-lactamase superfamily protein [Prevotella buccae D17] Length = 267 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 48/236 (20%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRP 105 +++D G +++ S+ +L TH HADH+ + + R + Sbjct: 21 DTDALLIDVGVGLRTLKKHFHDYGKRLDSVHHILITHDHADHVKSVGSVCRDF------R 74 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + V+ + + + YC + + + ++ P + G P Sbjct: 75 LPVFTTRKVHEGIERN--YCVRQKINPAFVHVIE------KATPFTL----GEFHVTPFG 122 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++G++ + TDV E L+ ++ ++L+I+A L G + Sbjct: 123 VPHDSADNVGYKIECEGVVFSLMTDVGHLTDEMLQVIEESNYLVIEANHDKEMLAQGRYP 182 Query: 216 -----------SHFSLSE-SLKKIELINP--KNAILTHMHVDLDYDMVLKSTPSRV 257 H S +E ++ E P ++ L H+ D ++ + + T +V Sbjct: 183 QYLKQRIAGPIGHLSNAECAMALAEHATPNLRHVWLCHLSADNNHPELARKTVDQV 238 >gi|192361468|ref|YP_001983287.1| metallo-beta-lactamase superfamily domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687633|gb|ACE85311.1| metallo-beta-lactamase superfamily domain protein [Cellvibrio japonicus Ueda107] Length = 256 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 50/208 (24%) Query: 50 RGSNTTVIVDTGPDFY---MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 V++D G ++ R ++ ++DA+L TH HADHI G+ L ++ Sbjct: 22 NWGQGHVLIDCGFSVREAEQRLARFELSPGNLDAILVTHEHADHIKGV-----AALARRY 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY P R+ + + +IE+ G + P+ Sbjct: 77 QLPVYMTPGTYHS--------------RSLGELPDLRLIES-----YTPFNIGNLWVQPV 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL- 213 H F F + TD+ + Q+LD ++++A L G Sbjct: 118 AVPHDAREPTQFVFEYAGRRLGILTDLGSITPHVEACYQDLDAMVLEANHDPVMLAYGPY 177 Query: 214 ----------HSSHFSLSESLKKIELIN 231 H H S ++ ++ +N Sbjct: 178 PHSLKQRVGGHWGHLSNQQAAGFLQRLN 205 >gi|149375811|ref|ZP_01893579.1| pyrroloquinoline quinone biosynthesis protein PqqB [Marinobacter algicola DG893] gi|149359936|gb|EDM48392.1| pyrroloquinoline quinone biosynthesis protein PqqB [Marinobacter algicola DG893] Length = 309 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 106/320 (33%), Gaps = 65/320 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ + CD + RT+SS+ +S ++ + Sbjct: 1 MQIRILGSAAGGGFPQWNCNCANCDGFRKGTLNASARTQSSIAVSEDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+AVL DH G+ L++ P+DV+ Sbjct: 57 SPDIRAQLAGFDAMQPARALRDTGINAVLLCDSQVDHTTGL-----LMLREGLPLDVWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F+ L P + + + + + AIP+L Sbjct: 112 AQVHEDLSSGFP-LFRMLTHWNGGPQWHEVPCTDQQSFSIPCAPSLRLTAIPLLSNAPPY 170 Query: 172 ------SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 G G V Y + + L+ ++ D L++D H Sbjct: 171 SPRRNNPHPGDNIGLFIEDTRSGETVMYAPGLGQPDEQILQWMRKADTLLVDGTVW--HD 228 Query: 216 SHF--------------SLSES-----LKKIELINPKNAILTHMHVD---LDYDMVLKS- 252 L++S ++ ++ + + +L H++ LD D ++ Sbjct: 229 DEMLRCEVGTRTGQEMGHLAQSGPGGMIEVLDTMPARRKVLIHINNTNPILDEDSPERAV 288 Query: 253 -TPSRVVPAFDGMQFSSPIP 271 T + +FDGM +P Sbjct: 289 LTRHGIEVSFDGMHLDMGVP 308 >gi|331091049|ref|ZP_08339891.1| hypothetical protein HMPREF9477_00534 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405271|gb|EGG84807.1| hypothetical protein HMPREF9477_00534 [Lachnospiraceae bacterium 2_1_46FAA] Length = 266 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 35/178 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-------DAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T +I+D G + E + I D +L TH H+DHI G+ +K Sbjct: 20 DHTHIIIDAGISKKK--IEEGLGKIGISGEELDGILVTHEHSDHIQGLG-----VFSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + Y + + + + + G + P Sbjct: 73 KVPIYATAGTICGIEN-------------YKSLGKMPEGLFHSIKADEEFSLGELTIKPF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H I G+R VA TD+ + +EKL++++ L+++A H H Sbjct: 120 AISHDAIEPTGYRIEKNQKSVAVATDLGNYDKYIVEKLKDVNALVLEA----NHDVHM 173 >gi|195028642|ref|XP_001987185.1| GH20113 [Drosophila grimshawi] gi|193903185|gb|EDW02052.1| GH20113 [Drosophila grimshawi] Length = 765 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 100/307 (32%), Gaps = 84/307 (27%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I +E +++D G + Sbjct: 455 RIIFLGTGS-------------CIPNKTRNV---SSILIQTAAE----AFMLLDCGEGTH 494 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHG------------------------ID 93 Q++R + + + AV +H HADH G I+ Sbjct: 495 GQIVRLYGRERAEQIMRQLHAVYISHLHADHHIGLIGLLHERQRLMPAAPLLLLAPRQIE 554 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 ++ +Q PI A + E + L D + I V C Sbjct: 555 PWLQFYNRQIEPI---ADAYTLVGNGEMLD---QPLADERVQQQLGIASIATCLVRHCPH 608 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG 212 + G + + QH + Y D P L +L +N LI +A Sbjct: 609 AYGISLT---LHAQHEGEPV------KLTYSGDT--MPCADLVQLGRNSTVLIHEATMED 657 Query: 213 ------LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAF 261 +H ++S+++++ + K+ ILTH Y PS V AF Sbjct: 658 DLEEEARIKTHSTVSQAIQQGRDMQAKHTILTHFSQR--YAK-CPRLPSSEDMQHVAIAF 714 Query: 262 DGMQFSS 268 D MQ + Sbjct: 715 DNMQVTV 721 >gi|152986784|ref|YP_001348668.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas aeruginosa PA7] gi|166989871|sp|A6V6I3|PQQB_PSEA7 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|150961942|gb|ABR83967.1| coenzyme PQQ biosynthesis protein B [Pseudomonas aeruginosa PA7] Length = 304 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 104/321 (32%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD +Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRVQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F+ L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFRML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 H G G Y + LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGTLFYAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD---LDYDMV 249 K G H L++S L+ + + +L H++ LD Sbjct: 226 RDDEMLACEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTASA 283 Query: 250 LKST--PSRVVPAFDGMQFSS 268 ++ S + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|257483073|ref|ZP_05637114.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011692|gb|EGH91748.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 303 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 98/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L R + + IE + P+ Sbjct: 110 CTEMVHEDLSTGFP-LFEML--RHWNGGLTWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|254974306|ref|ZP_05270778.1| hypothetical protein CdifQC_03288 [Clostridium difficile QCD-66c26] gi|255313430|ref|ZP_05355013.1| hypothetical protein CdifQCD-7_03741 [Clostridium difficile QCD-76w55] gi|255516118|ref|ZP_05383794.1| hypothetical protein CdifQCD-_03335 [Clostridium difficile QCD-97b34] gi|255649214|ref|ZP_05396116.1| hypothetical protein CdifQCD_03385 [Clostridium difficile QCD-37x79] gi|306519318|ref|ZP_07405665.1| hypothetical protein CdifQ_03715 [Clostridium difficile QCD-32g58] Length = 273 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 95/287 (33%), Gaps = 41/287 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I+G G +P C+ K R R SL I + +++DT Sbjct: 1 MKLKIVGSGGMSIIPSSFCKCKICEEARQKGGRYERLGPSLYI-------DDIKMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR----GYFLKQKRPIDVYAAPDCMKH 117 D + R+++ + + +H DH+ GI + + + PI YA P+ ++ Sbjct: 54 EDITVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIED 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + C K D ++N I I +I P + + Sbjct: 114 INRTNLDCLKYYGD-----VINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEK 168 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLII----------DALKNGLHSSH---FSLSESL 224 V Y N P + + D LII D K F+L E + Sbjct: 169 --KVIYAC-CNPKPFTHSDMYFDADVLIISLVSDDGILNDGTKLEDTPFKDEIFTLDEIV 225 Query: 225 KKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 + K I+TH+ Y + K + A+DGM+ Sbjct: 226 EIKNYYRIKKIIITHIDEMWGKSYGYYSELEKKL-DNIYFAYDGMEI 271 >gi|109897202|ref|YP_660457.1| beta-lactamase-like [Pseudoalteromonas atlantica T6c] gi|109699483|gb|ABG39403.1| beta-lactamase-like protein [Pseudoalteromonas atlantica T6c] Length = 328 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 87/262 (33%), Gaps = 55/262 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRG--YFLKQKRPID 107 + T IVD G Q+ + + + +DAV +H H DH G+ L + + + Sbjct: 57 NGHTYIVDAGDGTVGQLTKAGLKTTDVDAVFISHLHFDHTGGLPALLSLRWQVNAGNELT 116 Query: 108 VYAAP---DCMKHLFESFRY----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 VY P + + +F +Y + P V+E D K + Sbjct: 117 VYGPPGIKETVDGIFAFMKYGAAGHYGVPGQIPEPANRKVNVVELTDGD---KVSLEDFT 173 Query: 161 AIPILQQHG----------RISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI 205 + H + +L F+F V Y D P++++E L +N D LI Sbjct: 174 LTAVRNTHFSWPEGSDEWKKYQALSFKFELEDYTVVYTGDTG--PSKAVELLAKNADMLI 231 Query: 206 ---IDA-----LKNGLHS----------------SHFSLSESLKKIELINPKNAILTHMH 241 +D L H H + E + N K ++THM Sbjct: 232 SEMMDVEHTVNLVKRAHPHMPAQASKHLSQHLSTHHLTSGEVGQLAANANVKKVVITHMA 291 Query: 242 VDLDYDMVLKSTPSRVVPAFDG 263 L K + + + G Sbjct: 292 PGLTAPAEYKKYSNEIAAFYQG 313 >gi|90422399|ref|YP_530769.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris BisB18] gi|90104413|gb|ABD86450.1| Coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris BisB18] Length = 311 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A GVP+ C + RRT++S+ IS E +++ Sbjct: 2 LRVVVLGAAAGGGVPQWNCGCPVCQAARGDDPTLRRTQASVAISADGEHW----FLINAS 57 Query: 62 PDFYMQVL----------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q++ R + I V+ T+ D + G+ +R + P +YA Sbjct: 58 PDLRQQLIQTPQLHPQHGRLRHSPIAGVILTNGEVDAVAGLLSMR-----EGSPFTLYAH 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQ 166 + L + F L +R+ D P + G IE +P Sbjct: 113 RRVLAILKAN--SIFNVLSERSVK-----RREIAIDQPFELTLPDGTPAGIEVLPFAV 163 >gi|149276938|ref|ZP_01883081.1| hypothetical protein PBAL39_16199 [Pedobacter sp. BAL39] gi|149232607|gb|EDM37983.1| hypothetical protein PBAL39_16199 [Pedobacter sp. BAL39] Length = 249 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 80/234 (34%), Gaps = 21/234 (8%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFL 100 + R T +++D G + R Q+ ID +L +H H DH GI L Sbjct: 27 TCFHLRSGETNILIDCGATTLHGLRRLQIDPDQIDIILISHLHGDHYAGIPFLLMDAAVR 86 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K++R + + + + + D P +E + I+ Sbjct: 87 KRQRKLKIITPNTGKARIKALLQLLYPGSDKTEQLP------VEYIEYKSYEILQLDGIQ 140 Query: 161 AIPILQQHGRIS-SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLH 214 H + + S G R ++Y D + + D I + N Sbjct: 141 VQAYPVVHSKAALSHGLRITIGHQVLSYSGDTSW-TDNLIPLSDGADLFICECNFYNTST 199 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H + + + KI +N +LTH+ ++ ++ P A DGM S Sbjct: 200 PTHMNYLDLVSKISQLNFNKILLTHLSEEMLANLDRVDIP----VAKDGMTVSF 249 >gi|187735154|ref|YP_001877266.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425206|gb|ACD04485.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 259 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 71/222 (31%), Gaps = 53/222 (23%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T ++VD G ++ V +DA+L TH HADH+ G+ +K Sbjct: 19 RAGETVLLVDAGFSAARLRDKMKSAGVEPDELDAILLTHEHADHMKGVH-----QFTRKH 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + E P E G I P Sbjct: 74 AVRVYATRHTAMCVQEK-------------APEAPWAYFEKGQ-----SFRIGDIVITPF 115 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID---------ALKN 211 H + +GF+F ++ + +D P E L +D L+++ A Sbjct: 116 PTYHDAVDPVGFKFETERSSLGFISDTGQAPGCIAEYLAMVDSLVVESNYDPDMLAATPR 175 Query: 212 GLHS---------SHFSLSESLKKIELINP---KNAILTHMH 241 H S ++ + I KN +L H+ Sbjct: 176 RPWPLKQRIASAHGHLSNGQACDLLRRIAHGALKNVVLAHLS 217 >gi|114226|sp|P28607|ARS_ALTCA RecName: Full=Arylsulfatase; Short=AS; AltName: Full=Aryl-sulfate sulphohydrolase; Flags: Precursor gi|38694|emb|CAA46628.1| arylsulfatase [Pseudoalteromonas carrageenovora] Length = 328 Score = 77.1 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 82/241 (34%), Gaps = 49/241 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPID 107 + T +VD G Q+ + + ++DAV +H H DH G+ + + + + Sbjct: 57 NGNTYVVDAGDGTAGQLAKVGLDIKNVDAVFLSHLHFDHTGGLPAILSLRWQTSARNELV 116 Query: 108 VYAAPDCMKHLFESFRYC-FKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P + + F Y + L P P I+ +V + Sbjct: 117 VYGPPGTQQTVDGIFEYMTYGTLGHYGVPGQVPAPANTNIKVVEVEDGTQLKLPDFTVDV 176 Query: 164 ILQQHG----------RISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI--- 205 I H + +L F+F V Y D P+ ++EKL +D L+ Sbjct: 177 IRNSHYSWPKGSEEWKKFQALSFKFSLQDYTVVYTGDTG--PSSAVEKLSSGVDLLVSEM 234 Query: 206 --ID-------------------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 ID + L H S + + + N + ++THM L Sbjct: 235 MDIDHTVNMIKETNPQMPKGKFIGIHKHLSKHHLSPKQVGELAKAANVGSLVITHMAPGL 294 Query: 245 D 245 D Sbjct: 295 D 295 >gi|197120849|ref|YP_002132800.1| ribonuclease Z [Anaeromyxobacter sp. K] gi|196170698|gb|ACG71671.1| ribonuclease Z [Anaeromyxobacter sp. K] Length = 318 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 97/326 (29%), Gaps = 82/326 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ P I R ++ + R +VD G Sbjct: 15 LRLTFLGTSAAQ--PTI---------------RRN----LTGHAVRRERELFLVDCGEGT 53 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHG-IDGLRGYFL-KQKRPIDVYAAPDCMKHLF-- 119 Q+++ + A+ +TH HADH G I LR + + P+D+Y + L Sbjct: 54 QRQLIQFGAGFDVAAIFFTHFHADHYLGAIGFLRTLSMQNRTEPLDLYGPRPAKRLLETM 113 Query: 120 -----ESFRYCFKALDDRTY-------------------------------PPIVNPIVI 143 E F Y + + R P +P Sbjct: 114 LFTGAERFSYEVRIHEVRAGEAVRRDGCAMVPFPTEHRTPSLGWALREDARPGRFHPDKA 173 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEK 197 E +P G + P+ GR + R ++ D A ++E Sbjct: 174 EALGIPKG-PLFGALQRGEPVTLPDGRTVRPEEVVEAARRGRSLVITGDTRPC-AATVEA 231 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY----- 246 + D L+ D + + H + + + +LTH+ D Sbjct: 232 ARGADVLVHDCTFGDGEAERAEETLHSTARGAARVAHDAGVGRLVLTHLSTRYDRAWEPL 291 Query: 247 -DMVLKSTPSRVVPAFDGMQFSSPIP 271 + + + A DGM P+P Sbjct: 292 VEQAREVWQGPLDVAHDGMVLEVPLP 317 >gi|163783583|ref|ZP_02178573.1| hypothetical protein HG1285_14934 [Hydrogenivirga sp. 128-5-R1-1] gi|159881203|gb|EDP74717.1| hypothetical protein HG1285_14934 [Hydrogenivirga sp. 128-5-R1-1] Length = 252 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 85/248 (34%), Gaps = 34/248 (13%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDG 94 R I R V VD GP ++ + + ID ++ +H H DH ++ Sbjct: 23 RRSGGFLIDFSGVR-----VQVDPGPGAFVYLKEHGIDYRDIDLIVLSHIHLDHTADVNT 77 Query: 95 LRGYFL--KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++R + ++A ++ DDR P + + + Sbjct: 78 LIEACTDGGKQRNLALFAPKSAVEG------------DDRVVLPYLINRLGNVGVIKEGE 125 Query: 153 KSAGGVIEAIPI-LQQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKL-QNLDFLIIDAL 209 + + ++ + H + G F + V Y + + E LE+ + II+ Sbjct: 126 ELSYRGVKVKAVMRHSHHGAETYGLSFNDSVVYLS-CAKYTEEMLERYPKKPKVFIINTT 184 Query: 210 --KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD-------YDMVLKSTPSRVVPA 260 + H S+ E + I ++TH +++ + + VV A Sbjct: 185 FYRRRAGIEHLSVEEVKELIAACEADTTVITHFSMEMHERGPDRVARELSEELGLNVVAA 244 Query: 261 FDGMQFSS 268 DGM S Sbjct: 245 HDGMVISF 252 >gi|254249960|ref|ZP_04943280.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124876461|gb|EAY66451.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 382 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 103/322 (31%), Gaps = 73/322 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S V+V+ Sbjct: 76 MKIKILGSGAGGGLPQWNCNCANCRRARSGSGHVLPRTQSSIAVSDDGVDW----VLVNA 131 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AV+ DH+ G+ LR ++ P+ +YA+ Sbjct: 132 SPDILSQLRAAPDLQPARAIRDSGIAAVVLCDAQIDHVTGLLMLR----ERSTPLPLYAS 187 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L L V I + + G AI + + Sbjct: 188 APVLDDLSTGLP-LVPLLGHYCG---VAAHTIVPGEPFAVPAARGIRFTAIAVDSKPPPY 243 Query: 172 ----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------- 208 ++ +VA Y + + + + + +++D Sbjct: 244 SPRRASAAPGDNIALSIEDVASGRRAFYAPGLASVTDDVRAAMDGAELVLMDGTFWTGTE 303 Query: 209 -LKNGLHSSHF----SLSES--------LKKIELINPK-NAILTHMH--------VDLDY 246 + GL H L++ + ++ + +LTH++ +++ Sbjct: 304 MIDLGLSRKHAADMGHLAQCAEPGQPGMIDWLDTLPAHTRKVLTHINNTNPILDPHSVEH 363 Query: 247 DMVLKSTPSRVVPAFDGMQFSS 268 + + A DGMQF Sbjct: 364 AHLRA---HGIDVAHDGMQFQV 382 >gi|323494778|ref|ZP_08099877.1| pyrroloquinoline quinone biosynthesis protein PqqB [Vibrio brasiliensis LMG 20546] gi|323310971|gb|EGA64136.1| pyrroloquinoline quinone biosynthesis protein PqqB [Vibrio brasiliensis LMG 20546] Length = 305 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 103/323 (31%), Gaps = 77/323 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIV 58 ILG A G P+ C +N RT+SS+ +S V++ Sbjct: 1 MKILILGSAAGGGFPQWNCHCENC--AGVRNGTIKAQPRTQSSIAVSADGNNW----VLI 54 Query: 59 DTGPDFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ + + +I A + + DH+ G+ L++ P+ VY Sbjct: 55 NASPDIRQQINQSPQLWPQDQARGTNIRAAILSDSQIDHVTGL-----LTLREGLPLPVY 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQH 168 + L + F L R + + I ++ ++ G +E P+ + Sbjct: 110 CTDVVHEDLTTALP-LFNVL--RHWHGGLEFHAIGTDHQQGFSIEGISG-LEFFPVHLES 165 Query: 169 G------------RISSLGFRFGNVA---YCTDVNAFPAES---LEKLQNLDFLIIDAL- 209 +++G + + Y + L D ++D Sbjct: 166 NAPPYSPYRDDVVPGNNIGLKIVDTTSGNYLFYAPGIVESTPLVESMLAFADCALVDGTL 225 Query: 210 -------------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLD-------- 245 K G H + + S+ + + K +L H++ Sbjct: 226 WLDDEMIAKGFSKKLGSEMGHMPVNGENGSVALLSKFDIKRKVLIHINNTNPILNEESDA 285 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + V+ + V A DGM+ + Sbjct: 286 HHYVVS---NGVEIATDGMEITL 305 >gi|320534622|ref|ZP_08035067.1| hypothetical protein HMPREF9057_02971 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133142|gb|EFW25645.1| hypothetical protein HMPREF9057_02971 [Actinomyces sp. oral taxon 171 str. F0337] Length = 265 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 53/261 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT----TVIVDT 60 TI+GC S+ P+ SS + ++++D Sbjct: 1 MRLTIIGCSGSMSGPQ--------SSA--------SSYLVQADGVDADRAPRTYSIVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCM 115 GP Q+LR +DA+ +H HADH+ + G+ Y P+ + + Sbjct: 45 GPGSMGQLLRHLDPAELDAIAISHCHADHMVDLVGMHVYRRWLPTGALGPVACLGPSELL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRISSL 174 + L PP + +S + G + P H + + Sbjct: 105 ERLQ----------GVDGVPPSERYATEFGFVTAVPGRSYSVGPLVISPFEALH-PVEAY 153 Query: 175 GFRFG-----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFS 219 G+R ++A+ D + Q +D L+ +A ++ + H + Sbjct: 154 GYRIEGPSEEDPSRQVSLAFTGDT-DICQTMSDMAQGVDLLLAEAAFVEGRDTVGGMHMT 212 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 213 GRRAGELAAQAGAGHLVLTHI 233 >gi|167948757|ref|ZP_02535831.1| carbon-phosphorus lyase complex accessory protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 154 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 28/158 (17%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++D G R S+ +L TH H DHI G+ LR + I + A PD + Sbjct: 6 LLDAGLTDL--AERFPPGSLSQILLTHYHMDHILGLFDLR---WGVNQRIPL-AGPDDPE 59 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 K+ + + +P I++ +E + + G I+ + H S G+ Sbjct: 60 ----------KSRELKRHPGILDISHLEAFE-----ELELGAIQVTSLPLNHS-CPSFGY 103 Query: 177 RFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDA 208 F + +AY TD P ++ L Q ++ID Sbjct: 104 CFDDGRNSLAYLTDTLGLPEQTEAWLMRQRPSLIVIDC 141 >gi|325570355|ref|ZP_08146170.1| ribonuclease Z [Enterococcus casseliflavus ATCC 12755] gi|325156683|gb|EGC68859.1| ribonuclease Z [Enterococcus casseliflavus ATCC 12755] Length = 324 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 91/303 (30%), Gaps = 91/303 (30%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K LG GA GVP R +S + + ER N + D G Sbjct: 4 KKLMELEFLGTGA--GVPA--------------KHRNVTSTALRLLDER--NAVWLFDCG 45 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKH 117 MQ+L + I+ + TH H DHI+G+ GL Q P+++Y + Sbjct: 46 EGTQMQILHSTIRPRKIEKIFITHLHGDHIYGLPGLISSRSFQGGDTPLEIYGPKGIKAY 105 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + R + +YP E + I K E + HG I S G+R Sbjct: 106 IQTVLR---ISQTKVSYP----LHFFEIEEEGILFKDQ--QFEVSCLRLDHG-IDSFGYR 155 Query: 178 F------------------------------GNVAYCTDVNAFP---------------- 191 G V D Sbjct: 156 IVEASHQGELQVQALLELGLKPGPVFGRLKKGEVVTLDDGRQINGADFLGQAKKGRIVTI 215 Query: 192 -------AESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILT 238 ++ ++ D L+ ++ N + H + ++ + + + K +LT Sbjct: 216 LGDTRKCQNAVHLAKDADVLVHESTFNKEEAKLARAYFHSTTRQAAEVAQEAHAKRLLLT 275 Query: 239 HMH 241 H+ Sbjct: 276 HIS 278 >gi|154247253|ref|YP_001418211.1| beta-lactamase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154161338|gb|ABS68554.1| beta-lactamase domain protein [Xanthobacter autotrophicus Py2] Length = 247 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 81/250 (32%), Gaps = 23/250 (9%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPH 85 C R S ++ + + + +D G + R + S ID V +H H Sbjct: 8 CGDAFGSGGRGNSCFLVASQAVKAT-----LDFGASALVNFNRFNMGSADIDTVFISHLH 62 Query: 86 ADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 DH GI L + ++RP+ + P L + F + + I Sbjct: 63 GDHFGGIPFLLLDGQFVHLRERPLSIVGPPGTRARLTAAMEVLFPGMGE-----IDWRFA 117 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN----VAYCTDVNAFPAESLEK 197 +V + G + H S R + +A+ D L Sbjct: 118 WSVTEVEPGSTTRHGPLTLTTAEVVHPSGAPSTALRLEDGTHTLAFSGDTQW-TDALLPI 176 Query: 198 LQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 + D I ++ G H + + + + +LTHM D + + P+ Sbjct: 177 ARGADLFICESFAFEGEPYGHLAYRTIAHRRADLGARRILLTHMS-DAMWARRGEVDPTH 235 Query: 257 VVPAFDGMQF 266 + A DG++ Sbjct: 236 FIVAEDGLEL 245 >gi|254491680|ref|ZP_05104859.1| coenzyme PQQ biosynthesis protein B [Methylophaga thiooxidans DMS010] gi|224463158|gb|EEF79428.1| coenzyme PQQ biosynthesis protein B [Methylophaga thiooxydans DMS010] Length = 304 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 107/312 (34%), Gaps = 64/312 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G P+ + C + RT+SS+ +S + V+ +T PD Sbjct: 5 VLGSGAGGGFPQWNCNCVNCKGVREGTVKASPRTQSSIAVSADGKDW----VLFNTSPDI 60 Query: 65 YMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ +I A++ T DH G+ LR + +P +VY Sbjct: 61 KKQLDDFPALQPAREVRDTAITAIVITDAQIDHATGMLTLR----EHNKPWEVYTTKAVY 116 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPI--------LQ 166 + L F F L +N I + + +A G + A+P+ Sbjct: 117 EDLTTGFP-VFNILGHFRG---INHHEIATDQSSFTIPTADGLIFTAVPLKSEAPPYSPH 172 Query: 167 QHGRIS--SLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA--------LK 210 +H + ++G + + Y + LE + N D +++D Sbjct: 173 RHNTVPGDNIGIKIEDTRTGRNLFYAPGLGVAEPHVLEYMSNADAVLVDGTVWTDDEMSN 232 Query: 211 NGLHSSHF----SLSES-----LKKIELINPKNAILTHMHVD---LDYDMVLKST--PSR 256 G+ L +S + + + IL H++ L+ + + + Sbjct: 233 EGISDKRAQEMGHLDQSSEGGIMSILNAMQKPRKILIHINNTNPILNEESAQRQILNKAG 292 Query: 257 VVPAFDGMQFSS 268 + A+DGM Sbjct: 293 IELAYDGMDIEL 304 >gi|41614919|ref|NP_963417.1| hypothetical protein NEQ122 [Nanoarchaeum equitans Kin4-M] gi|40068643|gb|AAR38978.1| NEQ122 [Nanoarchaeum equitans Kin4-M] Length = 253 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 89/237 (37%), Gaps = 29/237 (12%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRP 105 T + VD G ++ + + +L +H H DH + ++ + K+ Sbjct: 28 DNGKTYIHVDPGEGALVRAKMYNIDIRKVRYILVSHVHLDHANDVNAVIDAITLGGIKKR 87 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + A+ + K + YP + + + + + ++ I Sbjct: 88 GILLASESVL-----------KETPEFGYPIVRRNYLNYLDHYEVLREYEDENLKVKSIR 136 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFS 219 +H +LG + + Y D FP + + +N+D LI + L +S H S Sbjct: 137 TKHTDPYTLGMKIEVNDKTIGYTADTRYFPELA-KFFENVDVLIANTLYPFGFTSNKHLS 195 Query: 220 LSESLKKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSSP 269 L ++++ +L PK ILTH + +++ K T R + A DG+ + Sbjct: 196 LDDAIRLAKLAKPKMLILTHFGKRIIKEGPAKMAEIIEKRTNVRTIAARDGLIVNLE 252 >gi|70732959|ref|YP_262732.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas fluorescens Pf-5] gi|1709749|sp|P55172|PQQB_PSEFL RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|929805|emb|CAA60733.1| pyrroloquinoline quinone B biosynthesis [Pseudomonas fluorescens] gi|68347258|gb|AAY94864.1| coenzyme pqq synthesis protein b [Pseudomonas fluorescens Pf-5] Length = 303 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 98/313 (31%), Gaps = 67/313 (21%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ IS V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIAISDDGVNW----VLCNASPDI 60 Query: 65 YMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQSFAPMQPGRALRD--TGIGAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDM 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQ 167 + L F FK L + ++ IE + +P+ Sbjct: 114 VHEDLSTGFP-LFKML--SHWNGGLSWNRIELDQSFSIPACPNLRFTPLPLRSAAPPYSP 170 Query: 168 HGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 H G G + Y + A LE + D L++D Sbjct: 171 HRFDPHPGDNIGLIVEDLRSGGKLFYAPGLGKVDAPLLEIMAASDVLLVDGTLWEDDEMQ 230 Query: 210 ---------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKS--TPS 255 + H + L+ +E + + +L H++ LD D ++ Sbjct: 231 RRGVGTRTGREMGHLAQNGPGGMLEVLEQLPRQRKVLIHINNTNPILDEDSAERAELVRR 290 Query: 256 RVVPAFDGMQFSS 268 +V A+DGM Sbjct: 291 KVEVAYDGMSIEL 303 >gi|300859075|ref|YP_003784058.1| hypothetical protein cpfrc_01658 [Corynebacterium pseudotuberculosis FRC41] gi|300686529|gb|ADK29451.1| hypothetical protein cpfrc_01658 [Corynebacterium pseudotuberculosis FRC41] Length = 255 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 88/284 (30%), Gaps = 49/284 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG SLG P N + + + + ++++D GP Sbjct: 1 MKLTILGSSGSLGAP--------------DNAAS------GYLIQMDNAPSILMDMGPGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHLF 119 Q+ R Q S V+++H HADH L + K + D L Sbjct: 41 LAQLERAQNPSDAHVVFSHLHADHCVDFPSLLVWRRYHPTAAAKGRNLCFGPTDTPVRLG 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +DD + + G + P H I S R Sbjct: 101 RLSADSVDNIDDMS-------DTFAFTPWQNAKEELVGAVSITPYSVVH-PIESFALRVE 152 Query: 180 N------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIE 228 + VAY D +++ +E ++ D + +A + H S E+ + Sbjct: 153 HKRSGKVVAYSGD-SSYTENLIECARDADVFLCEATWGETSEGKVPNMHMSGEEAGRIAR 211 Query: 229 LINPKNAILTHM----HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + K IL H+ + + V ++ GM+ Sbjct: 212 IAGAKRLILVHIPPWGNAKAALEKARSEFDGPVDISYQGMEIHI 255 >gi|226322347|ref|ZP_03797865.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] gi|225209269|gb|EEG91623.1| hypothetical protein COPCOM_00108 [Coprococcus comes ATCC 27758] Length = 249 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VDTG + L+E + +D +L TH HADHI G+ +K I Sbjct: 4 DRTHLLVDTGISKKRIEEGLKELEIKGKELDGILITHEHADHIQGLG-----VFSRKYEI 58 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P ++ + + Y + +++ + + G I+ P Sbjct: 59 PIYGTPGTIRGIRD-------------YKNLGKMPEGLYHEIQVDKEFKLGDIDVHPFAI 105 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H G+RF +A TD+ + ++E L++L+ +++++ L+ G + Sbjct: 106 SHDANEPSGYRFEQDGKKIAVATDLGKYDEYTVENLKDLNAVLLESNHDIHMLEVGPYPY 165 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + I N ++ +L H+ + +Y+ + T Sbjct: 166 YLKQRVLGDRGHLSNELSGRLLCDILHNNLRSVLLGHLSKENNYEELAYET 216 >gi|195999624|ref|XP_002109680.1| hypothetical protein TRIADDRAFT_53943 [Trichoplax adhaerens] gi|190587804|gb|EDV27846.1| hypothetical protein TRIADDRAFT_53943 [Trichoplax adhaerens] Length = 380 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 104/289 (35%), Gaps = 49/289 (16%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P+ R SS+ + N+ +++D G + Sbjct: 92 EIVFLGTGS-------------CYPSK---YRNVSSILLRL----NKNSCMLMDCGEGTF 131 Query: 66 MQVLRE-------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP------ 112 Q+ R + + + +H HADH GI + + + D Y +P Sbjct: 132 GQLYRHYGSELSDILRQLKFIFISHMHADHHQGIVEVLLEHKRATQSTDGYYSPLYVIGP 191 Query: 113 -DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR- 170 K L E Y F+++ R E +K+ G+I+ + H + Sbjct: 192 WAINKFLNEYNSY-FESVQWRFMSA--TEFFKEVCVFSDVVKTELGIIKLKTVYADHCKG 248 Query: 171 --ISSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLS 221 +L R G +AY D ++ +E ++ D LI +A + H + S Sbjct: 249 AFCIALTHREGWKLAYSGDTQP-SSKFVEIGKDADVLIHEATFEDDLVDEARSRKHSTTS 307 Query: 222 ESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQFSSP 269 E+++ +N K ILTH ++ R A+D M +S Sbjct: 308 EAIEIGVKMNAKFTILTHFSQRYPKIPAFSENYSDRTGIAYDHMTVNSE 356 >gi|70729592|ref|YP_259331.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas fluorescens Pf-5] gi|68343891|gb|AAY91497.1| coenzyme PQQ synthesis protein B [Pseudomonas fluorescens Pf-5] Length = 304 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 96/316 (30%), Gaps = 64/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 H ILG A G P+ + C +N RRT+SS+ +S ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCHNC--AGVRNGTLRARRRTQSSIALSDQGSEW----ILC 54 Query: 59 DTGPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ V ++ V+ DH G+ LR Q V+ Sbjct: 55 NASPDIRQQLESFPVLQPARQLRDTALAGVILLDSQIDHCTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV--PICMKSAGGVIEAI---PI 164 + L F F L PI ++ + P C A I P Sbjct: 110 CTEMVHQDLCSGFP-LFNMLSHWNGGLQWQPIHLDGREFSLPACPDIALRAIALRSSAPP 168 Query: 165 LQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIID------- 207 H G G ++ Y + L ++ D L++D Sbjct: 169 YSPHRGNPHPGDNIGLFIEDRRSGASLFYAPGLGQVDEALLGWMERADCLLVDGTLWRDD 228 Query: 208 ----ALKNGLHSSHF-SLSES-----LKKIELINPKNAILTHMHV-----DLDYDMVLKS 252 S L++S L+ +E +L H++ D D D + Sbjct: 229 EMRVCGVGDKLGSEMGHLAQSGPGGMLEVLERFPRARKVLIHINNTNPILDEDSDERAEM 288 Query: 253 TPSRVVPAFDGMQFSS 268 T + A DGM Sbjct: 289 TRRGIEVAHDGMDIHL 304 >gi|154421287|ref|XP_001583657.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121917900|gb|EAY22671.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 577 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 85/252 (33%), Gaps = 39/252 (15%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSID-------AVLYTHPHAD 87 R SS+ + ++ +I+D G F Q+ R + + AV TH H D Sbjct: 331 HRVASSIIVHT-----NDGNIILDCGEGFLEQLRRKYGLEQANQMIADTLAVYTTHFHWD 385 Query: 88 HIHGIDGLRGYFLK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 H GI L K R I V+ +++L D Y N I N Sbjct: 386 HCGGIQSLLAERRKFTNRRIPVFCDDFFIEYLK------CDEQTDGDY----NVDFILRN 435 Query: 147 DVPICMKSAGGVIEAIPILQQHGRI---SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDF 203 + I +H L + VAY D + + E + + D Sbjct: 436 ENTFNYN----KFVLRTIPTEHCENSMGCCLDYDGLRVAYPGD-HHILDKFGETVGHCDI 490 Query: 204 LIIDAL---KNGLHS---SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 LI +A + H H S+ + K + K ++TH+ + +P + Sbjct: 491 LIHEATKGDREDSHEEAWGHSSVWSAEKIGNNLGAKLNVITHISKRFQEKEITAPSP-NM 549 Query: 258 VPAFDGMQFSSP 269 V AFD M Sbjct: 550 VFAFDFMTVRLE 561 >gi|39935016|ref|NP_947292.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris CGA009] gi|61215049|sp|Q6N8F6|PQQB_RHOPA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|39648867|emb|CAE27388.1| pyrroloquinoline quinone biosynthesis protein B [Rhodopseudomonas palustris CGA009] Length = 308 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 29/177 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C +P+ RT++SL IS + +++ P Sbjct: 2 LRVIVLGAAAGGGVPQWNCGCPVCRAALDDPRLARTQASLAISADNAHW----FLINASP 57 Query: 63 DFYMQ------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 D Q LR I V+ T+ D + G+ +R + P +YA Sbjct: 58 DLRQQIVATPQLHPRAGALRH--SPIAGVILTNGEVDAVAGLLSMR-----EGSPFSIYA 110 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L + F L++ P PI + P+ A ++ Sbjct: 111 HDKVLAILRAN--SIFNVLNESIVP--RRPIATDQPFEPLLPDGALSGLQITAFEVP 163 >gi|303237430|ref|ZP_07323996.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] gi|302482380|gb|EFL45409.1| metallo-beta-lactamase domain protein [Prevotella disiens FB035-09AN] Length = 267 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 46/230 (20%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +D G Q+ I+ ++ TH HADH+ + L + I Sbjct: 21 DTDCIAIDCGLGIRTVKKHFHSYGLQLSMINNIIITHDHADHVKSVGSLSTDY-----DI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + + +C K + P + + + I G + Sbjct: 76 PVYATKMVHEGINRN--WCVK----KKVAPSMVRFIEKGETKQI------GEFKVTAFAV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ N TD E + + ++L+I+A L G + Sbjct: 124 PHDSCDCVGYSIECEGVNFTIVTDCGHITDEIKKFISQANYLVIEANHEPEKLAAGPYPK 183 Query: 217 -----------HFSLSE-SLKKIELINP--KNAILTHMHVDLDYDMVLKS 252 H S E + +E P K+ L H+ + ++ + + Sbjct: 184 YLKARIASQIGHLSNGECAQAIVENAMPHLKHVWLCHLSDENNHPELARK 233 >gi|260911539|ref|ZP_05918125.1| metallo-beta-lactamase superfamily protein [Prevotella sp. oral taxon 472 str. F0295] gi|260634329|gb|EEX52433.1| metallo-beta-lactamase superfamily protein [Prevotella sp. oral taxon 472 str. F0295] Length = 267 Score = 76.7 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 88/229 (38%), Gaps = 50/229 (21%) Query: 56 VIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G L++ I VL TH HADH+ + L + + + Sbjct: 25 LLIDAGVGIRT--LKKHFREYGLSLAQIQNVLITHDHADHVKSVGSLS-----RDYGLPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA + ++ YC + V+P ++ + + + G P H Sbjct: 78 YATHRVHVGIEKN--YCVRCK--------VSPERLKLVEKGVTFRL--GSFTITPFNVPH 125 Query: 169 GRISSLGF--RFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF 218 + ++G+ R+G++ +C TDV E + ++L+I+A L +G + H Sbjct: 126 DSLDNVGYEVRYGDIVFCLLTDVGEVTDEMKPFINAANYLVIEANHDVEMLSDGPYPRHL 185 Query: 219 ------------SLS--ESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 ++ E+L + ++ L H+ + ++ + K T Sbjct: 186 KERILGKTGHLSNMECAETLAQNASEKLRHVWLCHLSEENNHPELAKKT 234 >gi|298489169|ref|ZP_07007189.1| Coenzyme PQQ synthesis protein B [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156306|gb|EFH97406.1| Coenzyme PQQ synthesis protein B [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330985832|gb|EGH83935.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. lachrymans str. M301315] Length = 303 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 98/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|156100013|ref|XP_001615734.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804608|gb|EDL46007.1| hypothetical protein, conserved [Plasmodium vivax] Length = 911 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 88/264 (33%), Gaps = 62/264 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S+ P S I V E N +++D G Sbjct: 626 SFYFLGTGCSM--PSTF---------------RNVSGIILNVEE---NFRIVLDFGEGSL 665 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVY 109 Q+ + + SI V +H HADH G+ Y+L R + + Sbjct: 666 YQLYWMSQSWLHFSKTIKSIKVVFISHAHADHHMGL-----YYLLHMRRLLFPHLDDPLI 720 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P +K F F P+ EN +V + + P H Sbjct: 721 LIPSTLKSWMNLFSELFFDK------PVNVLYNEENLEVKEKVGDDDSFVFLRPFKVAHV 774 Query: 170 RISSLGFR-----FGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA------LKNGLHSSH 217 + S G + G+V Y D P +++ +N D LI +A L +H H Sbjct: 775 K-ESYGIKIERENIGSVVYSADTR--PCDNVRMFSKNCDILIHEATFDDELLNEAIHKKH 831 Query: 218 FSLSESLKKIELINPKNAILTHMH 241 + E+++ + K ILTH Sbjct: 832 STTHEAMQISLEVQCKTLILTHFS 855 >gi|126698271|ref|YP_001087168.1| hypothetical protein CD0692 [Clostridium difficile 630] gi|115249708|emb|CAJ67525.1| putative metallo-hydrolase/oxidoreductase [Clostridium difficile] Length = 273 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 95/287 (33%), Gaps = 41/287 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT-R--SSLKISRVSERGSNTTVIVDTG 61 I+G G +P C+ K R R SL I + +++DT Sbjct: 1 MKLKIIGSGGMAIIPSSFCKCKICEEARQKGGRYERLGPSLYI-------DDIKMLIDTP 53 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR----GYFLKQKRPIDVYAAPDCMKH 117 D + R+++ + + +H DH+ GI + + + PI YA P+ ++ Sbjct: 54 EDIAVACNRQKISEVKHISISHHDPDHVKGIRIVEKIGCDFITGENNPIGFYALPEVIED 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + C K D ++N I I +I P + + Sbjct: 114 INRTNLDCLKYYGD-----VINCISINETSHVKINNFDIDLINNNPDRNITFYVIKENEK 168 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLII----------DALKNGLHSSH---FSLSESL 224 V Y N P + + D LII D K F+L E + Sbjct: 169 --KVIYAC-CNPKPFTHSDMYFDADVLIISLVSDDGILNDGTKLEDTPFKDEIFTLDEIV 225 Query: 225 KKIELINPKNAILTHMHVDLD-----YDMVLKSTPSRVVPAFDGMQF 266 + K I+TH+ Y + K + A+DGM+ Sbjct: 226 EIKNYYRIKKIIVTHIDEMWGKSYGYYSELEKKL-DNIYFAYDGMEI 271 >gi|28867741|ref|NP_790360.1| coenzyme PQQ synthesis protein B [Pseudomonas syringae pv. tomato str. DC3000] gi|32129883|sp|Q88A81|PQQB_PSESM RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|28850976|gb|AAO54055.1| coenzyme PQQ synthesis protein B [Pseudomonas syringae pv. tomato str. DC3000] gi|331015067|gb|EGH95123.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 303 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 96/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLDVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|111224522|ref|YP_715316.1| bifunctional cobalamin biosynthesis protein cobU [Frankia alni ACN14a] gi|111152054|emb|CAJ63778.1| Bifunctional cobalamin biosynthesis protein cobU [Includes: Cobinamide kinase; Cobinamide phosphate guanylyltransferase] [Frankia alni ACN14a] Length = 483 Score = 76.7 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 15/121 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G++ G P D +C R ++++ + + +++D GPD Sbjct: 1 MRVTLLGTGSADGWPNPWCDCASCAWARQNEVRGQTAVLV--------DDALLIDCGPDV 52 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG---LRGYFLKQKRPIDVYAAPDCMKHLF 119 R V + +L +H H DH+ R + RP+DV P + Sbjct: 53 PRTAARLGVRLSGLRHLLISHAHPDHLG--PESLMWRSWSSAAGRPLDVVGPPAALAVCR 110 Query: 120 E 120 Sbjct: 111 A 111 >gi|330874822|gb|EGH08971.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 303 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 96/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRTLRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLDVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|257467944|ref|ZP_05632040.1| metal dependent hydrolase [Fusobacterium ulcerans ATCC 49185] gi|317062230|ref|ZP_07926715.1| metal dependent hydrolase [Fusobacterium ulcerans ATCC 49185] gi|313687906|gb|EFS24741.1| metal dependent hydrolase [Fusobacterium ulcerans ATCC 49185] Length = 258 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 79/265 (29%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--- 65 ILG G+S +S+ + ++VD G Sbjct: 5 ILGSGSSG-----------------------NSIFVE-----NDGIKLLVDAGFSCKKIE 36 Query: 66 --MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 ++ + + IDA+L TH H DHI G + +K I +Y P+ Sbjct: 37 EKLKCIDRNINEIDALLITHEHTDHIQG-----AGIISRKYDIPIYITPESYAA------ 85 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 T ++ ++ +K I+ P H ++G+R Sbjct: 86 -------GETKLGKISDKNLKLITKDFFLKDG---IKVRPFDVMHDAERTIGYRLETECG 135 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----------------LKNGLHSSHFSLS 221 +A TD+ E + +D ++I+ + + H S + Sbjct: 136 KRMAISTDIGYVSNTVREYFKEVDIMVIECNYDYNMLMKCSYPWDLKARVKGRNGHLSNN 195 Query: 222 ESLKKIELI---NPKNAILTHMHVD 243 ++ K I+ + + L H+ D Sbjct: 196 DAAKFIKDMYTERLRKVYLAHISKD 220 >gi|303287486|ref|XP_003063032.1| beta-lactamase superfamily hydrolase [Micromonas pusilla CCMP1545] gi|226455668|gb|EEH52971.1| beta-lactamase superfamily hydrolase [Micromonas pusilla CCMP1545] Length = 866 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 95/333 (28%), Gaps = 86/333 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G P R S + R+ G V++D G Y Sbjct: 523 EILFLGTG----------------SAEPSKYRGASGVLC-RLPPSGGGGYVLLDAGEGAY 565 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 + R V + AV +H HADH+ G+ G+ K P+ V C + Sbjct: 566 GAMTRYLGAHGAQSAVSKLKAVWVSHHHADHMLGLPGVLAARPKNAPPLPVVGPRSCAEW 625 Query: 118 LFE------------SFRY----------CFKALDDRTYPPIVNPIVIENNDVPI----- 150 L F + F+ R PP P + N P Sbjct: 626 LRASPSAPAGAVRAWRFVHSRSLFGGGGGPFRMPAPRFPPPPPPPPRLGGNGFPPPPPPP 685 Query: 151 ----CMKSAGGVIEAIPILQQHGRISSLGFRFGN---------VAYCTDVNAFPAESLEK 197 + G+ I +H ++ VAY D Sbjct: 686 PPASSFAAELGLARFEAIPVEHCPEAAACVLATRTTADGSAWSVAYSGDCRP-SKRFAAA 744 Query: 198 LQNLDFLI-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 + +D +I DAL++ H + +E+L K+ +LTH +K Sbjct: 745 ARGVDVMIHEATFEDALRSHAVKKRHSTSAEALAIARASGAKHVVLTHFSQRYPRAAAVK 804 Query: 252 --------------STPSRVVPAFDGMQFSSPI 270 VV AFDGM+ Sbjct: 805 AADGGGDAADGDDDDAGDDVVTAFDGMRLRWDA 837 >gi|126666045|ref|ZP_01737025.1| pyrroloquinoline quinone biosynthesis protein PqqB [Marinobacter sp. ELB17] gi|126629367|gb|EAZ99984.1| pyrroloquinoline quinone biosynthesis protein PqqB [Marinobacter sp. ELB17] Length = 311 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 101/319 (31%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + CD + RT+SS+ +S ER V+ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCANCDGLRKGTVNAHARTQSSIAVSEDGERW----VLFNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I AVL DH G+ L++ P+D++ Sbjct: 57 SPDIRAQLASFPAMQPARALRDTGIAAVLLIDSQVDHTTGL-----LTLREGLPLDIWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND----VPICMKSAGGVIEAIPILQQ 167 + L F F L+ + + I D + + + AIP+L Sbjct: 112 AQVHEDLSSGFP-LFPMLEH--WNGGLRWQEIALGDGAAEAFVIPCAPNLKLTAIPLLSN 168 Query: 168 HGRI------SSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDALKN 211 G G Y + L+ ++ D L++D Sbjct: 169 APPYSPRRDQPHPGDNIGVFIEDTRTGAAVLYAPGLGKPDEHILQWMRQADVLMVDGTVW 228 Query: 212 GLHSSHF--------------SLSES-----LKKIELINPKNAILTHMHVDL-----DYD 247 H L++S ++ ++ + + IL H++ D Sbjct: 229 --HDDEMIRQQVGTKTGQDMGHLAQSGPGGMMEVLDTMMARRKILIHINNTNPILNEDSA 286 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + + A+DGM Sbjct: 287 ERAQLAQHGIEVAWDGMYI 305 >gi|329936578|ref|ZP_08286314.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptomyces griseoaurantiacus M045] gi|329304093|gb|EGG47975.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptomyces griseoaurantiacus M045] Length = 250 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 80/252 (31%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R P+ VY + Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCAPLPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + G +H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPGTFEV------GPFTVHTERVRH-PVEAYGI 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D E ++ D + +A K + H + E+ + Sbjct: 148 RVEHGGRSLTYSGDT-GVSEALDELARDTDLFLCEAAFTHGKENIPDLHLNGREAGESAA 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLLLTHI 218 >gi|313111202|ref|ZP_07797024.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa 39016] gi|310883526|gb|EFQ42120.1| pyrroloquinoline quinone biosynthesis protein B [Pseudomonas aeruginosa 39016] Length = 304 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 99/321 (30%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFPML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 H G G Y + LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGTLFYAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLD-YDMVLK 251 K G H L++S L+ + + +L H++ D V Sbjct: 226 RDDEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTVSA 283 Query: 252 STPS----RVVPAFDGMQFSS 268 + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|56963812|ref|YP_175543.1| ribonuclease Z [Bacillus clausii KSM-K16] gi|76363375|sp|Q5WGC3|RNZ_BACSK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|56910055|dbj|BAD64582.1| ribonuclease Z [Bacillus clausii KSM-K16] Length = 312 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 95/317 (29%), Gaps = 79/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP ++ S R ER + T + D G Sbjct: 1 MELHFLGTGA--GVPA---------------KKRNVSALAIRFLER-NGTVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----PDCMK 116 Q L + +++A+ TH H DHI G+ GL Q P+D+Y ++ Sbjct: 43 QHQFLHSPLSLAAVEAIFITHLHGDHILGLPGLLSSRSFQGAETPLDIYGPKGLEAFVIQ 102 Query: 117 HL-----FESFRYCFKALDDRT---------------YPPIVNPIVIENNDVPICMKSAG 156 L F F L + +P I+ D P + + Sbjct: 103 ALETTKTKLRFPIRFHVLAEGRIRDEEKLSVDALALDHPVESYAFRIKEQDKPGTLDAEA 162 Query: 157 GVIEAIP-------------ILQQHGRISSLG-------FRFGNVAYCTDVNAFPAESLE 196 +P + GRI G R V D Sbjct: 163 LKAMGVPPGPLYAQLKKGETVKLADGRI-VNGSAFLDESIRGRTVVIAGDTAPV-KAMEA 220 Query: 197 KLQNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNAILTHMH-----VDLD 245 D L+ +A K+ H H +++++ + ILTH+ + + Sbjct: 221 FASGADVLVHEATFASNKKDDAHLYGHSTIADACALAKRAAVGQLILTHVSSRYARNENE 280 Query: 246 YDMVLKSTPSRVVPAFD 262 Y + V+ A D Sbjct: 281 YRDEAAALLPNVIIAED 297 >gi|304395873|ref|ZP_07377755.1| coenzyme PQQ biosynthesis protein B [Pantoea sp. aB] gi|304356242|gb|EFM20607.1| coenzyme PQQ biosynthesis protein B [Pantoea sp. aB] Length = 305 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 98/311 (31%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C RT+SS+ +S E V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCHGVRNGTIQAQARTQSSIILSDNGEDW----VLCNASPDI 60 Query: 65 YMQVL------REQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+L R+ VL I ++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQILHTPELTRQGVLRGTAIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKAL----DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L F F L + PI + A +I P Sbjct: 116 ADLSTGFP-IFPMLTHWNGGLQHRPIAPLTPFSVDVCTDLQFKAIPIISNAPPYSPFRDR 174 Query: 172 SSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--------- 212 G + Y + A L LQ D L+ID Sbjct: 175 PLAGHNVALFIENRANGQTLLYAPGLGEPDAVILPWLQKADCLLIDGTVWQDDELLATGV 234 Query: 213 LHSS-----HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SRV 257 H++ H +L+E + + + + IL H++ ++ + +P + Sbjct: 235 GHNTGKAMGHLALAEEQGLMALLASLPARRKILIHINNTNP--ILNEQSPQRQFLTEQGI 292 Query: 258 VPAFDGMQFSS 268 ++DGM Sbjct: 293 EVSWDGMAIHL 303 >gi|147670010|ref|YP_001214828.1| beta-lactamase domain-containing protein [Dehalococcoides sp. BAV1] gi|146270958|gb|ABQ17950.1| beta-lactamase domain protein [Dehalococcoides sp. BAV1] Length = 257 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 84/255 (32%), Gaps = 54/255 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIVDTGP 62 T LG G + R S +I ++D GP Sbjct: 9 SLTFLGTGGA---------------------RFMVSRQILASGGIWLNLDGKRFLIDPGP 47 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPIDVYAAPDCM 115 +QV R + + A+L +H H DH ++ + +G F K + A D Sbjct: 48 GSIVQVCRLGLDPEKLSAILLSHRHLDHSGDVNVMIEAMTQGGFKKHGHFL---APKDAF 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + Y P +N + + + I+ + + + G Sbjct: 105 DNEPVIYSYL---------KPFLNDLTMLEEGREYNLDG----IKVFTTRRHQHPVETYG 151 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIEL 229 F F + Y +D F E + D LII+ + H S+ ++ K I Sbjct: 152 FIFESSSHRIGYVSDTRYF-EEMPQVYAGCDVLIINVVLKEAIERIYHLSIPDAAKLITG 210 Query: 230 INPKNAILTHMHVDL 244 PK AILTH + L Sbjct: 211 AKPKTAILTHFGLQL 225 >gi|325294764|ref|YP_004281278.1| metallo-beta-lactamase family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065212|gb|ADY73219.1| metallo-beta-lactamase family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 271 Score = 76.3 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 90/287 (31%), Gaps = 60/287 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIVDTGP 62 LG G S R + + T + VD GP Sbjct: 14 KLVFLGTGGS---------------------RYVAFGFQRQAGGLWFNFEGTNIHVDPGP 52 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 ++ ++ + ++ V+ +H H DH ++ + + + Sbjct: 53 GAFIHSYKKGLEPNWVNFVILSHRHLDHCADVNHI--------------LEAMTLGGKRK 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-----IPILQQHGRISSLG 175 P ++ + I + I P+ HG + + G Sbjct: 99 RGILLCPEDAIEIDPVVLQYTRRNIEETVIIREGMNFEISHNLKVTFPVRNTHG-VETYG 157 Query: 176 FRF---GNVAYCTDVNAFPAESLEKLQNL-DFLIIDALKNGLHS--SHFSLSESLKKIEL 229 F N+ Y +D F + EK ++ D LI++ + SH S + K I Sbjct: 158 MIFYWKKNIGYISDTAYF-EKIEEKYKDASDLLILNVTLKEPNPRISHLSAICAEKIIGE 216 Query: 230 INPKNAILTHMHVDLD-------YDMVLKSTPSRVVPAFDGMQFSSP 269 I P+ AILTH + + K T +V+ A+D M F Sbjct: 217 IKPEVAILTHFGRTMLNAKPWEIAAEISKRTGVKVIAAYDNMVFDLE 263 >gi|194291442|ref|YP_002007349.1| pyrroloquinoline quinone biosynthesis protein pqqb [Cupriavidus taiwanensis LMG 19424] gi|226704951|sp|B3R8D4|PQQB_CUPTR RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|193225346|emb|CAQ71290.1| Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) [Cupriavidus taiwanensis LMG 19424] Length = 305 Score = 76.3 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 114/317 (35%), Gaps = 74/317 (23%) Query: 9 ILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A G P+ + CD P RT+SS+ + ++V+ Sbjct: 6 VLGSAAGGGFPQWNCNCRNCDGVRRGTVRATP---RTQSSIAVCGDGPE----AILVNAS 58 Query: 62 PDFYMQVLR---------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ + + +I AVL DH+ G+ LR + +R + +YA Sbjct: 59 PDILQQLRQTPALQPARAARDTAIAAVLLMDAQIDHVTGLLMLR----EHRRALPLYATA 114 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPI------- 164 ++ L +F ++ + + + + + GV + A+P+ Sbjct: 115 SVLEDLAGAFP----LTRILSHYCGLQCHALPCDGMAFSVPPLDGVALTAVPLQSKAPPY 170 Query: 165 -LQQHGRIS--SLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA------- 208 ++H ++G R + Y + +L+ D +++D Sbjct: 171 SPRRHAPQPGDNIGLRIEDRHSGRSAFYAPGLGQVDDHVFAQLRRADVVLVDGTFWRDDE 230 Query: 209 -------LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 ++ H +LS ++ ++ + + IL H++ ++ + +P Sbjct: 231 MQALGFSTRSAADMGHLALSGPGGMIEVLDRLPARRKILIHINNTNP--VLAEDSPERAE 288 Query: 256 ----RVVPAFDGMQFSS 268 + A+DGM+ + Sbjct: 289 LARHGIELAYDGMEIAL 305 >gi|296389604|ref|ZP_06879079.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas aeruginosa PAb1] Length = 304 Score = 76.3 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 98/319 (30%), Gaps = 70/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDD-----RTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + + L E F F L R P ++ P +A + + P Sbjct: 109 WCTQMVHQDLSEGFP-LFPMLSHWNGGLRHRPIALDGAPFAIPACPRLRFTAIPLRSSAP 167 Query: 164 ILQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G Y + LE ++ D L++D Sbjct: 168 PYSPHRGDPHPGDNIGLFVEDLDSAGTLFYAPGLGEVDEALLEWMRRADCLLVDGTLWRD 227 Query: 210 ----------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLD-YDMVLKST 253 K G H L++S L+ + + +L H++ D V Sbjct: 228 DEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTVSAER 285 Query: 254 PS----RVVPAFDGMQFSS 268 + A+DGM Sbjct: 286 AELDASGIEVAWDGMHIQL 304 >gi|302186012|ref|ZP_07262685.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. syringae 642] Length = 303 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 96/317 (30%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQDFAPMQPGRALRDTGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 + L F F+ L + ++ IE + P+ Sbjct: 112 DMVHEDLSTGFP-LFEMLKH--WNGGLSWNRIELQGSFVIPACPNLRFTPFPLRSAAPPY 168 Query: 166 QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 H G G + Y + EK+++ D L++D Sbjct: 169 SPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPERAE 286 Query: 256 ----RVVPAFDGMQFSS 268 V AFDGM Sbjct: 287 LVRRNVEVAFDGMSIEL 303 >gi|298242824|ref|ZP_06966631.1| ribonuclease Z [Ktedonobacter racemifer DSM 44963] gi|297555878|gb|EFH89742.1| ribonuclease Z [Ktedonobacter racemifer DSM 44963] Length = 303 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 88/314 (28%), Gaps = 88/314 (28%) Query: 23 GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVL 80 G C NR + + R + + D G + L + A+ Sbjct: 5 CLLGTCGMMPLPNRWLSC-MLV-----RSGSHLTLFDCGEGTQIPWKTLGWGFRQLGAIC 58 Query: 81 YTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 ++H HADH+ G+ G+ R P+D+Y Y + Sbjct: 59 FSHMHADHVAGLPGVLFMVAHAGRTEPLDIYGPAGT--------SYVV---EGLRRIAAE 107 Query: 139 NPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGFRFG------------------ 179 P I ++ G ++A HG I L +R Sbjct: 108 LPFPIHIHEFKGGEHFQLPGNLQASCAPASHG-IPCLAYRVELQRQPAFQVEQARALDIP 166 Query: 180 ---------------------------------NVAYCTDVNAFPAESLEKL-QNLDFLI 205 +AY TD P +L +L ++D L+ Sbjct: 167 VQFWKRLQTGETVSYNERTFTPQDVLGAARRGIALAYITDTR--PQSALSELAHDVDLLV 224 Query: 206 -------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 +D L ++H SES +LTH ++ + V Sbjct: 225 CESMYDTLDDLPLARSNAHMVASESAGIARDAGAHQLVLTHFSPKVNDTTRAEKLARSVF 284 Query: 259 P----AFDGMQFSS 268 P A DGM + Sbjct: 285 PNTRAARDGMVLTL 298 >gi|224498572|ref|ZP_03666921.1| hypothetical protein LmonF1_02299 [Listeria monocytogenes Finland 1988] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 94/327 (28%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIDPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKVISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ K + N K ILTH+ Sbjct: 212 TRETSSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTIFENTEIAYD 298 >gi|254827137|ref|ZP_05231824.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258599520|gb|EEW12845.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 94/327 (28%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIDPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ K + N K ILTH+ Sbjct: 212 TRETSSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTIFENTEIAYD 298 >gi|16804016|ref|NP_465501.1| hypothetical protein lmo1977 [Listeria monocytogenes EGD-e] gi|224501222|ref|ZP_03669529.1| hypothetical protein LmonFR_01655 [Listeria monocytogenes FSL R2-561] gi|41017570|sp|Q8Y5S8|RNZ_LISMO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|16411430|emb|CAD00055.1| lmo1977 [Listeria monocytogenes EGD-e] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 64/317 (20%), Positives = 105/317 (33%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLF- 119 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 120 ------ESFRYCFKALDDRTYPPIVN-PIVIENNDVPICMKSAGGVI------------- 159 Y + + ++ +D+ ++S G I Sbjct: 103 SLRLSGTRLTYKINFEEIEPGVIFEDKMFIVTADDLDHGVRSFGYRIVEKDKQGALNAEK 162 Query: 160 ------EAIPILQ--QHGRISSL--GFRFGNVAYC------------TDVNAFPAESLEK 197 EA P+ Q ++G I +L G Y D + LE Sbjct: 163 LKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTRE-TSSELEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 N D L+ +A G + H + ++ K + N K ILTH+ D D + Sbjct: 222 ALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHISSRYDRDASKE 281 Query: 252 STP------SRVVPAFD 262 A+D Sbjct: 282 LLIEAKTIFENTEIAYD 298 >gi|47096621|ref|ZP_00234209.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254899325|ref|ZP_05259249.1| hypothetical protein LmonJ_05914 [Listeria monocytogenes J0161] gi|254912536|ref|ZP_05262548.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] gi|254936863|ref|ZP_05268560.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|284802422|ref|YP_003414287.1| hypothetical protein LM5578_2178 [Listeria monocytogenes 08-5578] gi|284995564|ref|YP_003417332.1| hypothetical protein LM5923_2129 [Listeria monocytogenes 08-5923] gi|47015006|gb|EAL05951.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258609458|gb|EEW22066.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|284057984|gb|ADB68925.1| hypothetical protein LM5578_2178 [Listeria monocytogenes 08-5578] gi|284061031|gb|ADB71970.1| hypothetical protein LM5923_2129 [Listeria monocytogenes 08-5923] gi|293590521|gb|EFF98855.1| metallo-beta-lactamase family protein [Listeria monocytogenes J2818] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 94/327 (28%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIDPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ K + N K ILTH+ Sbjct: 212 TRETSSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTIFENTEIAYD 298 >gi|217963877|ref|YP_002349555.1| ribonuclease Z [Listeria monocytogenes HCC23] gi|254808646|sp|B8DBV5|RNZ_LISMH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|217333147|gb|ACK38941.1| ribonuclease Z [Listeria monocytogenes HCC23] gi|307571553|emb|CAR84732.1| ribonuclease Z [Listeria monocytogenes L99] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 98/320 (30%), Gaps = 84/320 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----PDCMK 116 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y Sbjct: 43 QHQIMRSQIKLSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGESDLTIYGPVGITEYVET 102 Query: 117 HLF---ESFRY--CFKALDDRTYPPIV---NPIVIENNDVPICMKSAGGVI--EAIPILQ 166 L Y F ++ P ++ I +++ ++S G I + P Sbjct: 103 SLRLSGTRLTYKIIFNEIE----PGLIFEDKMFSITVDELDHGLRSFGYRIVEKDKPGAL 158 Query: 167 QHGRISSLG---------FRFGNVAYCTDVNAF-----------------------PAES 194 ++ G + G D + A Sbjct: 159 NADKLIEDGVEPGPIFQKIKKGETVTLADGSVINGKDYIDEPQKGKIISIFGDTKATASE 218 Query: 195 LEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 LE N D L+ +A G H + ++ + N K ILTH+ D D Sbjct: 219 LELALNADVLVHEATFEGDKEKLAGEYMHSTTLQAASLAKKANVKKLILTHISSRYDRDA 278 Query: 249 VLKSTP------SRVVPAFD 262 + A+D Sbjct: 279 SKELLIEAQSVFENTEIAYD 298 >gi|312137056|ref|YP_004004393.1| beta-lactamase superfamily hydrolase [Methanothermus fervidus DSM 2088] gi|311224775|gb|ADP77631.1| beta-lactamase superfamily hydrolase [Methanothermus fervidus DSM 2088] Length = 261 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 91/232 (39%), Gaps = 28/232 (12%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPID 107 N +D GP +++D VL +H H DH ++ + K +R Sbjct: 24 DNKNFHIDPGPGAFIRTYQFGLNPINLDVVLVSHAHTDHYSDVEVMIEAMTKGMTRRRGT 83 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + + ++ + F + + + +V+E D + G ++ Q Sbjct: 84 IVGSRSVIEGYND-----FGPCISKYHLTKSDVVVMEPGD-----TTKIGNVKIKATPTQ 133 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN--GLHSSHFSLS 221 HG + +GF+F ++Y +D F + + + D LI + ++ H Sbjct: 134 HGDPTGIGFQFKTKDIVISYTSDTAYF-EDLGKYHKGADILIANVIRPNGERIRGHMCTD 192 Query: 222 ESLKKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQF 266 + K + ++ PK I+TH + + + + K T RV+PA DGM+ Sbjct: 193 DLKKLLNIVRPKLTIMTHFGMKMINNNPAKEARDLCKETSLRVIPASDGMKI 244 >gi|313623068|gb|EFR93349.1| ribonuclease Z [Listeria innocua FSL J1-023] Length = 306 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 91/327 (27%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 QVLR + ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQVLRSHIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIEPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIVSIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ + N K ILTH+ Sbjct: 212 TRETVSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAATLAKAANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTVFENTEIAYD 298 >gi|288927601|ref|ZP_06421448.1| VicX protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330435|gb|EFC69019.1| VicX protein [Prevotella sp. oral taxon 317 str. F0108] Length = 267 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 50/229 (21%) Query: 56 VIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G L++ I VL TH HADH+ + L + + + Sbjct: 25 LLIDAGVGIRT--LKKHFREYGLSLAHIQNVLITHDHADHVKSVGSLS-----RDYGLPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA + ++ YC + V+P ++ + + + G P H Sbjct: 78 YATHRVHVGIEKN--YCVRCK--------VSPERLKLVEKGVAFRL--GSFTVTPFNVPH 125 Query: 169 GRISSLGF--RFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF 218 + ++G+ +FG++ +C TDV E + ++L+I+A L G + H Sbjct: 126 DSLDNVGYQVQFGDITFCLLTDVGEVTDEMKPFINAANYLVIEANHDVEMLSGGPYPQHL 185 Query: 219 --------------SLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 +E+L + ++ L H+ + ++ + K T Sbjct: 186 KERILGKTGHLSNVDCAEALAQNASEKLRHVWLCHLSEENNHPELAKKT 234 >gi|317048012|ref|YP_004115660.1| coenzyme PQQ biosynthesis protein B [Pantoea sp. At-9b] gi|316949629|gb|ADU69104.1| coenzyme PQQ biosynthesis protein B [Pantoea sp. At-9b] Length = 308 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 99/313 (31%), Gaps = 67/313 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C RT+SS+ +S E V+ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCSGLRNGTIQAQARTQSSIIVSDNGEDW----VLCNASPDI 60 Query: 65 YMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + +I +++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQIAHTPELNKKGVLRGTAIGSIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L F F L + + + + AIPIL S Sbjct: 116 ADLTSGFP-IFTMLQH--WNGGLQHHALTPLEPFRVDVCRDLEFTAIPILSNAPPYSPFR 172 Query: 176 FR----------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKN 211 R + Y + A + LQ D L+ID L Sbjct: 173 DRPLPGHNVALFITNRANGQTLLYAPGLGEPDAVIMPWLQKADCLLIDGTVWQDDELLTT 232 Query: 212 GLHSS------HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------S 255 G+ + H +L+E + + + K IL H++ ++ + +P Sbjct: 233 GVGKNTGKAMGHLALAEEQGLMALLASLPAKRKILIHINNTNP--ILNEQSPQRQFLTQQ 290 Query: 256 RVVPAFDGMQFSS 268 + ++DGM Sbjct: 291 GIEVSWDGMAIHL 303 >gi|288922566|ref|ZP_06416746.1| cobalbumin biosynthesis protein [Frankia sp. EUN1f] gi|288346084|gb|EFC80433.1| cobalbumin biosynthesis protein [Frankia sp. EUN1f] Length = 490 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 92/285 (32%), Gaps = 43/285 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G++ G P + +C R +S++ + + +++D GPD Sbjct: 1 MRLTLLGTGSADGWPNPWCECASCAWARTHQPRGQSAVLV--------DDRLLIDFGPDV 52 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIH-GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R V + +L H H DH+ R + +P+DV A P ++ Sbjct: 53 PRAAARFGVSLAGLRHLLVGHAHPDHLGPEALMWRSWSTVADQPLDVLAPPAALEVCRAF 112 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS-LGFRFG- 179 R P+ I + V + + P+ +HG F Sbjct: 113 IRRWEGREAGADGSPLRLLPAIADEPVELGRGDEPRYL-VRPVAARHGDADIGPAVLFDV 171 Query: 180 ------NVAYCTDVNA-FPAESLEKLQN--LDFLII---DALKNGLHSSHFSLS---ESL 224 + Y D A P ++L L D +++ + + G H L + Sbjct: 172 TTPDGSRLLYGCDTAAPLPPQTLTALAGRAFDVVLLEENNGDRPGFGE-HLDLPSFARLV 230 Query: 225 KKIELINP----KNAILTHMHVDLD---------YDMVLKSTPSR 256 ++ + + H+ +D+ ++ P Sbjct: 231 AELRELGAVVESTRVLAVHLSHRNPPGDELARRLHDIGAEAPPDG 275 >gi|182413381|ref|YP_001818447.1| beta-lactamase domain-containing protein [Opitutus terrae PB90-1] gi|177840595|gb|ACB74847.1| beta-lactamase domain protein [Opitutus terrae PB90-1] Length = 267 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 84/275 (30%), Gaps = 88/275 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F+ILG G+S ++L ++ V+VD G Sbjct: 3 MRFSILGSGSSG----------------------NAALLVT------EGARVLVDAGFSA 34 Query: 65 Y-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 + + E + IDAV TH H DH GI+GL+ + I ++A + + Sbjct: 35 RRLGTLLAAVGESLDRIDAVFLTHEHGDHSGGIEGLKKFPH-----IQIFANAGTARAVQ 89 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y + E + +E H +GFRF Sbjct: 90 AGLSY------------RPTWHLFETGA-----RFLFRDLEVTTFSVPHDAQEPVGFRFT 132 Query: 180 ------------NVAYCTDVNAFPAESLEKLQNL-----------DFLIIDALKNGL--- 213 ++ + TD+ P E+L++ + L D + Sbjct: 133 SGHDGDLFSPRRSLTFLTDLGHAPLNVREQLRDCCVVVIEANHCPELLKADTRRPWPTKQ 192 Query: 214 ----HSSHFSLSESLKKIELI-NP--KNAILTHMH 241 H S + + I P ++ LTH+ Sbjct: 193 RISGRHGHLSNEAVRELLTEIACPQWRHVYLTHLS 227 >gi|73661944|ref|YP_300725.1| putative metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494459|dbj|BAE17780.1| putative metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 277 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 92/303 (30%), Gaps = 64/303 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG + G P + + RT ++ I + +++DT D Sbjct: 1 MKIEFLGT--AGGFPSLYKSH---SQHSQAIHRTGPAIYI-------HDLQLLIDTSEDI 48 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 + Q+ R ++ I +Y+H H DH GI + + Sbjct: 49 FYQLRRSEIYDIKYGIYSHWHPDHTMGIRIWETLNFDFINKVPQSKKSKIILTEQHVND- 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F+ F D Y + I E +K IE I + + + GF Sbjct: 108 ----FKKYFGHWDHLNYLGDLGVIEKEIIPNNGQIKIGETTIEWIQLAED----IAFGFY 159 Query: 178 FGNVAYCTDVNA---FPAES-----LEKLQNLDFLII--------DALKNGLHSSHF--- 218 T P E +EKL+N+D I+ + +H + Sbjct: 160 I-----TTSTLRILIIPDEIKGYHPIEKLKNVDVAILPFGSNEVNPVTEERIHENGMLAA 214 Query: 219 ----SLSESLKKIELINPKNAILTHM--------HVDLDYDMVLKSTPSRVVPAFDGMQF 266 + ES+ IN + TH+ + LK A+DG+Q Sbjct: 215 LGEITFQESVTIAREINATHTYFTHIEATENLNETHIEQLEQQLKEEGLLTTIAYDGLQI 274 Query: 267 SSP 269 + Sbjct: 275 TIE 277 >gi|213965850|ref|ZP_03394041.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Corynebacterium amycolatum SK46] gi|213951428|gb|EEB62819.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Corynebacterium amycolatum SK46] Length = 260 Score = 75.9 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 58/286 (20%), Positives = 98/286 (34%), Gaps = 52/286 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS-RVSERGSNTTVIVDTGPD 63 +LGC S+G P S S + E + T ++D GP Sbjct: 1 MRLKVLGCTGSMGGP---------------------SAPASGYLIELDNGRTFVIDLGPG 39 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK------H 117 ++ + + +L TH H DH I GL ++ P A Sbjct: 40 VLAELQKISDPAACDLLLTHVHPDHTADIPGL--LVWRRFHPT---APASSRNLLVGPGD 94 Query: 118 LFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKS--AGGVIEAIPILQQHGRISS 173 + + +AL + + V+ N P+ + A G P H + + Sbjct: 95 IHDRIGTMCQALGSEEDANLEDTFDQVVSNPGEPLLVGGGEADGGAVVTPYNMVH-PVPA 153 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESL 224 +G+R +AY D E +E ++ D I +A + H + E+ Sbjct: 154 VGYRIEADGLTIAYTGDTAW-TDELVELARDADIFICEATWCSNEEGTPPDMHLTGYEAG 212 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQF 266 K L K +LTH+ D + L++ S V A+ GM+ Sbjct: 213 KAATLAGVKKLVLTHIPPYADGEEALRAAKSTFAGDVELAYLGMEL 258 >gi|110808134|ref|YP_691654.1| hypothetical protein SFV_4376 [Shigella flexneri 5 str. 8401] gi|110617682|gb|ABF06349.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 276 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 37/223 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 N T ++D G +Q+++ + ID +L TH H+DHI + Q + I Sbjct: 29 GNKTWLIDAGYGASLQLVKNNILLRQIDNILLTHLHSDHILDYPSVLMNAWASGLQDKTI 88 Query: 107 DVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ P + F + P ++ DV + + Sbjct: 89 HVFGPPGTRAMTAASWQVFDRDITLRMEEEGKPDPR-KLVTAQDVGEGVVYKDDTVTVTA 147 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHS 215 + H + +RF + + D + FP + + D L+ +A+ + Sbjct: 148 LKVPHSPFPGGEAFAYRFDTQGKRIVFSGDTSYFPPLATFS--EGADILVHEAVHEPSVA 205 Query: 216 S------------------HFSLSESLKKIELINPKNAILTHM 240 H ++ + K K IL+H+ Sbjct: 206 KLADSIGNGKTLAKAIASHHTTIEDVGKIANEAKVKKLILSHL 248 >gi|225548255|ref|ZP_03769540.1| hypothetical protein RUMHYD_00235 [Blautia hydrogenotrophica DSM 10507] gi|225040595|gb|EEG50841.1| hypothetical protein RUMHYD_00235 [Blautia hydrogenotrophica DSM 10507] Length = 265 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 51/230 (22%) Query: 55 TVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 V+VD G + V +D +L TH H+DH+ G+ + +K + Sbjct: 23 HVLVDVGISKKRIEEGLRS--IDMDVRDMDGILITHEHSDHMKGLG-----VMSRKYHLP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA ++ + E P I+ ++ + + P Sbjct: 76 IYATRGTIEAIQEM--------ASVGRMPEGLFHEIQEDE-----EFQIKDLTVRPFHIS 122 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H +G+R +V TD+ + ++ LQ LD L+++A L+ G + Sbjct: 123 HDAAQPVGYRLNCKEQSVGIATDMGTYDDYTVRNLQKLDALLLEANHDVRMLQVGSYPYY 182 Query: 216 ---------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + K L H+ + +Y+ + T Sbjct: 183 LKRRILGNQGHLSNENAGQLLCRLLHDRLKAVFLGHLSKENNYEQLAYET 232 >gi|318057180|ref|ZP_07975903.1| hypothetical protein SSA3_04530 [Streptomyces sp. SA3_actG] gi|318078068|ref|ZP_07985400.1| hypothetical protein SSA3_15428 [Streptomyces sp. SA3_actF] Length = 250 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 87/279 (31%), Gaps = 54/279 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S +P + SS + R +++D G Sbjct: 1 MKLTVVGC--SGSIPSVDSPC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCMK 116 ++ R + +DAV+ +H HADH ID + ++ P+ VY + Sbjct: 40 LGELQRHIGLNELDAVVLSHLHADHC--IDMCAYFVVRYYNADPLTTGPLPVYGPEGTEE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + + ++ I G +H + + GF Sbjct: 98 RLTAGHG---DTPTRSAMAEVFDFHTLKPGSFRI------GPFTLHAEQVRH-PVEAYGF 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D A + + D + +A K + H + ++ + + Sbjct: 148 RVEHEGRSLTYSGDT-GPAAALDQLAADSDLFLCEAAFTDGKEEIPDLHLNGRDAGESAQ 206 Query: 229 LINPKNAILTHMHVDLDYD---MVLKSTPSR-VVPAFDG 263 + +LTH+ D + V A G Sbjct: 207 RAGARRLVLTHIPPWTDPQLNLTAAREVYEGPVELAHTG 245 >gi|313607871|gb|EFR84034.1| ribonuclease Z [Listeria monocytogenes FSL F2-208] Length = 306 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 95/327 (29%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER N + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NKIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGESDLTIYGPVGITEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S R + + I+ + + + I HG + S G+R Sbjct: 103 SLR--------LSGTRLTYKIIFNEIEPGLIFEDKMFSITVD--ELDHG-LRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAF-------------------- 190 G D + Sbjct: 152 KDKPGALNADKLIDDGVEPGPIFQKIKKGETVTLADGSVINGKDYIDEPQKGKIISIFGD 211 Query: 191 ---PAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 A LE N D L+ +A G H + ++ + N K ILTH+ Sbjct: 212 TKATASELELALNADVLVHEATFEGDKEKLAGEYMHSTTLQAASLAKKANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAQSVFENTEIAYD 298 >gi|294056544|ref|YP_003550202.1| metallo-beta-lactamase family protein [Coraliomargarita akajimensis DSM 45221] gi|293615877|gb|ADE56032.1| metallo-beta-lactamase family protein [Coraliomargarita akajimensis DSM 45221] Length = 316 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 78/268 (29%), Gaps = 49/268 (18%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGI 92 R+ +S + ++ V D G Q+ + +H H DHI G Sbjct: 60 YRSNTSC-VEIHTDSDEI--VFCDAGTGIRDYAHQLSDLSTPRCYHIFISHLHWDHIQGF 116 Query: 93 DGLRGYFLKQKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 ++ I ++ P+ + + P IE + P Sbjct: 117 PFFTPAYIA-GNRIIIHGFHPETEEAIRMQM-----NAPCFPVPFEAMQASIEFDIQPEG 170 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAES------LEKLQNL 201 I I Q H S G+RF + Y +D P + +E +N Sbjct: 171 ACFDVAGIHVRSIKQVHPG-DSWGYRFEKDGKSIVYSSDSEHGPESTAPDYPFIEFFRNA 229 Query: 202 DFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST- 253 D LI D + H + +++ K I+ H + Y T Sbjct: 230 DALIFDGQYTLEQVKNEKRNWGHSDHTTAIELAARAEVKRLII--FHHEPAYADAEIETI 287 Query: 254 ---------------PSRVVPAFDGMQF 266 P R+ A+DG+ Sbjct: 288 HSTAIQQISQNHYQFPKRIDLAYDGLYI 315 >gi|138897040|ref|YP_001127493.1| hypothetical protein GTNG_3411 [Geobacillus thermodenitrificans NG80-2] gi|196249861|ref|ZP_03148557.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] gi|134268553|gb|ABO68748.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] gi|196210737|gb|EDY05500.1| beta-lactamase domain protein [Geobacillus sp. G11MC16] Length = 264 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 54/250 (21%) Query: 38 TRSSLKISRVSE-----RGSNTTVIVDTGPD--FYMQVLRE---QVLSIDAVLYTHPHAD 87 R S+ S + + ++VD G Q+ E +DA+L TH H+D Sbjct: 3 MRFSVLASGSTGNAFYIETDSQRLLVDAGLSGKQLEQLFAEIGRHPKQLDALLVTHEHSD 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ L +K + VYA + + + I + + Sbjct: 63 HIKGLG-----VLARKYRLPVYANEKTWRAMEQ---------------AIGDIPTEQKFV 102 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 P+ G ++ H + + F +A TD + ++N D Sbjct: 103 FPLGTVKTFGDVDVESFGVSHDAAEPMFYVFHYGEKKLALLTDTGYVSERMKKTIENADV 162 Query: 204 LIIDA------LKNGLHS-----------SHFSLSES-LKKIELIN--PKNAILTHMHVD 243 ++++ L+ G + H S E+ L ++I K L H+ D Sbjct: 163 FVLESNHDVGMLRMGRYPWNVKRRILSDVGHISNEEAGLVLADVIGERTKQIYLAHLSQD 222 Query: 244 LDYDMVLKST 253 + + + T Sbjct: 223 NNMKELARMT 232 >gi|116492969|ref|YP_804704.1| beta-lactamase superfamily hydrolase [Pediococcus pentosaceus ATCC 25745] gi|116103119|gb|ABJ68262.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Pediococcus pentosaceus ATCC 25745] Length = 245 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 80/215 (37%), Gaps = 26/215 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPI- 106 + N +++D G +++ R L +DAVL TH H DH + L+ + L K + Sbjct: 25 QSGNYNLLLDAGSGTLLELQRHLNPLDLDAVLLTHYHHDHTADLGVLQYQWQLNSKNKVE 84 Query: 107 --DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP- 163 +Y L +F + I+ + K + A Sbjct: 85 ILPIYG--HTEDPL--NFG-ALTWPNASQGVGYNENEEIDLGPFTVSFKKTIHPVPAFAT 139 Query: 164 --ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS---HF 218 + ++ G+I + +D F E ++ N D L+ D H+ H Sbjct: 140 RIVERETGKI---------FTFTSDTRYF-DELVKFATNSDLLVTDTNFLSNHTGIKWHL 189 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 S E+ + N K +++H+ +D D +LK T Sbjct: 190 STKETAELFNKSNAKQLMISHLSPQIDIDEMLKET 224 >gi|159036038|ref|YP_001535291.1| beta-lactamase domain-containing protein [Salinispora arenicola CNS-205] gi|157914873|gb|ABV96300.1| beta-lactamase domain protein [Salinispora arenicola CNS-205] Length = 256 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 84/257 (32%), Gaps = 48/257 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + FT+LGC P + S G V VD G Sbjct: 4 ENLQFTVLGCATPY--PSVDNPC-------------------SGYLVSGGGARVWVDAGS 42 Query: 63 DFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPDCM 115 Q+ R ++ +DA+ +H HADH D L Y+ ++ PI +Y P Sbjct: 43 GTLAQLQRHVRLDELDAIWVSHLHADHSA--DLLTAYYGALYADIQLAAPIPLYGPPGIA 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + T PI + +E + A G + HG I + Sbjct: 101 DRL------AHFLTNTATRSPIESAFAVEELHD--GHRVAVGALTLTSHAVAHG-IPAFA 151 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HFSLSESLKKI 227 R ++AY D P + + D L+ +A S H + ++ Sbjct: 152 LRVDVGGRSLAYSGDTAPCPGLT-SLARGCDVLLCEAESAQAPSKGERVHHTPEDAGDTA 210 Query: 228 ELINPKNAILTHMHVDL 244 + + I+TH+ L Sbjct: 211 RVAEARRLIVTHIGRFL 227 >gi|294497397|ref|YP_003561097.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294347334|gb|ADE67663.1| Metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] Length = 243 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 79/226 (34%), Gaps = 26/226 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + ++VD G Q+ + + IDA++ +H H DH+ + + Sbjct: 20 SSYLVEH-----DGFQLLVDCGSGALAQLQKYAKPEEIDAMILSHYHHDHVA---DVGVF 71 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 R I + + Y D ++ + + + + + K G Sbjct: 72 QYA--RLIQTHLGNAVKELSIYGHTY-----DQESFNKLTHKGITKGVEYDPSQKLEIGP 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----K 210 + +H + R V Y D + E + + D LI + + Sbjct: 125 FTIEFMKTKH-PVVCYAMRISAGNQTVVYTADSSYL-EEFVSFSEEADLLICECNFYANQ 182 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 +G + H + +E+ + K+ +LTH+ ++ +++ + Sbjct: 183 DGRGAGHMTSTEAGTLASKASVKHLMLTHLPHYGEHQQLVEEAAAH 228 >gi|253559426|gb|ACT32390.1| coenzyme PQQ biosynthesis protein PqqB [Pseudomonas fluorescens] Length = 303 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 94/313 (30%), Gaps = 67/313 (21%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ +S V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQAFAPMQPGRALRDTGIGAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQHG 169 + L F F L + ++ IE + +P+ H Sbjct: 116 EDLSTGFA-LFNMLTH--WNGGLSWNRIELDQRFTIAACPNLRFTPLPLRSAAPPYSPHR 172 Query: 170 RISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 G G + Y + LE + D L++D Sbjct: 173 FDPHPGDNIGLIVEDLRTGGKLFYAPGLGKVDESLLEIMAGSDCLLVDGTMWDDDEMQRR 232 Query: 210 -------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR------ 256 + H + L+ +E + + +L H++ ++ + +P R Sbjct: 233 GVGTRTGREMGHLAQNGPGGMLEVLERLPEQRKVLIHINNTNP--ILDEDSPERAELVRR 290 Query: 257 -VVPAFDGMQFSS 268 + ++DGM Sbjct: 291 KIEVSYDGMSIEL 303 >gi|218248358|ref|YP_002373729.1| ribonuclease Z [Cyanothece sp. PCC 8801] gi|257060317|ref|YP_003138205.1| ribonuclease Z [Cyanothece sp. PCC 8802] gi|254808628|sp|B7K1N1|RNZ_CYAP8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218168836|gb|ACK67573.1| ribonuclease Z [Cyanothece sp. PCC 8801] gi|256590483|gb|ACV01370.1| ribonuclease Z [Cyanothece sp. PCC 8802] Length = 314 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 99/337 (29%), Gaps = 102/337 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEV--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR ++ I + TH H DHI+G+ GL I++Y PD + +L Sbjct: 42 QHQLLRSDVKISQITRIFITHMHGDHIYGLMGLLASCGLAGNAQDIEIYGPPDLIDYLKA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 +Y L R V P ++ ++ L +H RI + G+R Sbjct: 102 CAKYSQVKLSHRVRVYGVRPGILYEDE----------EFTVSCGLLKH-RIPAFGYRIAE 150 Query: 179 ----------------------------GNVAYCTDVNAFPAESL--------------- 195 G V D + L Sbjct: 151 KNRPGRFDVEKATALGIPPGPIYGQLKRGEVVTLPDGRRINGKDLCGETETGRKVIYCTD 210 Query: 196 --------EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E Q+ D LI +A + H + + + + + K I+TH Sbjct: 211 TVFCDGAVELAQDGDVLIHEATFAHQDAQLAFDRLHSTSTMAAQVALIAGVKQLIMTHFS 270 Query: 242 VD------LDYDMVLKSTP---SRVVPAFDGMQFSSP 269 L D +L + + A D M + P Sbjct: 271 PRYAPGNVLQLDDLLAEAKAIFANTILARDFMTYEVP 307 >gi|302551726|ref|ZP_07304068.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302469344|gb|EFL32437.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 250 Score = 75.9 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 77/251 (30%), Gaps = 50/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + + P+ VY Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCNPLPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + I G H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPSTFDI------GPFTVHTERVAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D E + D + +A K + H + E+ + Sbjct: 148 RVEHGGKVLTYSGDT-GVSPALDELARGADLFLCEAAFTHGKENIPDLHLNGREAGETAA 206 Query: 229 LINPKNAILTH 239 + +LTH Sbjct: 207 RTGARRLVLTH 217 >gi|322499065|emb|CBZ34137.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 490 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 27/146 (18%) Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN------------- 180 P+ + I A + +HG+ S+ + FG Sbjct: 287 RPLRMHLPITATAATAGGTDAASDLPFYSFPVEHGKGYVSMAWVFGRGTAFKSRQTQQQG 346 Query: 181 --------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHFSLSESLKKI 227 V Y +DV+ PA S+ LQ+L D L++D L +SH+ E++ + Sbjct: 347 QQQEEGSCVVYISDVSHIPATSMAFLQDLVKIDVLVLDLLAEHGAPSASHYCADEAIPLV 406 Query: 228 ELINPKNAILTHMHVDLDYDMVLKST 253 + P+ M L++ ++ Sbjct: 407 VALAPRRTYFVGMFCSLEHHRANEAL 432 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 13/94 (13%) Query: 55 TVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------- 102 +++D G F ++R + ++D +L TH HAD + G+D LR Sbjct: 140 HILIDCGKTFRDAYFKVMIRCNIRTVDTLLLTHGHADAVAGLDDLRDLQTMHMVSTGDWV 199 Query: 103 -KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + Y +P +K L +S Y + + Sbjct: 200 IDSFVPTYLSPSTLKTLEKSVDYIIRNSVKSGHA 233 Score = 41.7 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 8/46 (17%) Query: 7 FTILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKIS 45 T++G G S GVP I + DP+ P N R SL I+ Sbjct: 27 LTVVGSGVSTGVPVIGHLGLGCACEHAVADPSGP-NCRNNISLLIT 71 >gi|307354533|ref|YP_003895584.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157766|gb|ADN37146.1| beta-lactamase domain-containing protein [Methanoplanus petrolearius DSM 11571] Length = 257 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G + +++D G + ++ I +L TH H+DH+ G+D + +K Sbjct: 18 EGDSGAILIDAGLSTKEILKRLDEAGGKKELIQGILLTHEHSDHMKGVD-----VIARKL 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VYA + + F+ P + P D P + ++ Sbjct: 73 DIPVYATHGTL--------WQFEEKRKSDKPVELKPCR---KDEPFTVDG----LKITAF 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H GF +AYCTD + L L+ +++I+++ L+NG + Sbjct: 118 STHHDACDPCGFLIDESGSRIAYCTDTGMISEKILGNLKKSEYVILESNHCPVMLQNGPY 177 Query: 215 S 215 Sbjct: 178 P 178 >gi|302386266|ref|YP_003822088.1| ribonuclease Z [Clostridium saccharolyticum WM1] gi|302196894|gb|ADL04465.1| ribonuclease Z [Clostridium saccharolyticum WM1] Length = 265 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-PDFY-MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G + Q L E + + ++ TH H+DH G+ L +K + Sbjct: 20 DTTHILVDAGISNKRIQQGLNEIGLKGSELTGIVITHEHSDHTKGLG-----VLARKYGV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + + +Y + + + V + G +E P Sbjct: 75 PIYGTRETLDEISKQ-KYLGEYPREL------------FHAVSPDVDFCVGDLEVKPFSI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H + + +R +VA TD+ + +E LQ LD L++ + L+ G + Sbjct: 122 DHDASNPVAYRIQHGHKSVAVATDMGHYDQYIIEHLQGLDALLLESNHDVNMLQAGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N K +L H+ + +Y+ + T Sbjct: 182 YLKRRILGDHGHLSNENAGRLLCCILHENLKKILLGHLSKENNYEELAYET 232 >gi|24212841|ref|NP_710322.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira interrogans serovar Lai str. 56601] gi|45656037|ref|YP_000123.1| hypothetical protein LIC10127 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193498|gb|AAN47340.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira interrogans serovar Lai str. 56601] gi|45599270|gb|AAS68760.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 312 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 88/226 (38%), Gaps = 43/226 (19%) Query: 49 ERGSNTTVIVDTGPDFYM---QVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQK 103 + S I+D G +L E + D +L TH H DHI G + + Sbjct: 70 QAQSGERYIIDCGSGIRQLGNDLLAEGLKPGDTVHILITHTHWDHIQGWMFFKPAYFP-G 128 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV-------NPIVIENNDVPICMKSAG 156 I Y+ + +L E F + ++ +P + ++E N+ Sbjct: 129 VNIHFYS---TIPNLQERFE---RQQNEEHFPVTLSSMMSNKTFHLLEKNE-----SIKI 177 Query: 157 GVIEAIPILQQHGRISSLGFRFG----NVAYCTDV-NAFPA-ESLEKLQ----NLDFLII 206 G ++ P L +H + GFRF + +CTDV P E +L+ D LII Sbjct: 178 GSVKVTPFLLRHPG-NCTGFRFEEQDKSFLFCTDVEVQEPDLEEFFELKKTFGKTDMLII 236 Query: 207 DA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 DA + + H S +++ E++ K +LTH + D+ Sbjct: 237 DAQYSSEEAEKKVGWGHTSGRVAVRCGEILEVKRLVLTH--HEPDH 280 >gi|327310103|ref|YP_004337000.1| beta-lactamase domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326946582|gb|AEA11688.1| beta-lactamase domain protein [Thermoproteus uzoniensis 768-20] Length = 237 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 23/199 (11%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ +++D G Y ++ + + + ++ TH H DHI G L ++ I V AA Sbjct: 26 TDRRILLDAGEGTYAKLAQCGLPLPEVLILTHAHGDHILGAPTLLLMARQRGTRIKVVAA 85 Query: 112 PDCMKHLFE-----SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 M L + + + + ++ PP D I + +A +EA+ + Sbjct: 86 ASVMSSLVKILEAVNMPHLRQYMEPVEVPPGGEAR---EGDTRIALAAARHSVEAVHVRV 142 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSS--HFSL 220 +HG VAY D E +E + D LI + + + H + Sbjct: 143 EHGGRC--------VAYSGDTAP-SDELVELARGCDLLIHEVSGNPGQEEPAHAVGHSTT 193 Query: 221 SESLKKIELINPKNAILTH 239 S++++ K + H Sbjct: 194 SDAVEIARRAGVKALLPVH 212 >gi|302521561|ref|ZP_07273903.1| beta-lactamase domain-containing protein [Streptomyces sp. SPB78] gi|302430456|gb|EFL02272.1| beta-lactamase domain-containing protein [Streptomyces sp. SPB78] Length = 250 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S +P + SS + R +++D G Sbjct: 1 MKLTVVGC--SGSIPSVDSPC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCMK 116 ++ R + +DAV+ +H HADH ID + ++ P+ VY + Sbjct: 40 LGELQRHIGLNELDAVVLSHLHADHC--IDMCAYFVVRYYNADPLTTGPLPVYGPEGTEE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + + ++ I G +H + + GF Sbjct: 98 RLTAGHG---DTPTRSAMAEVFDFHTLKPGSFRI------GPFTLHAEQVRH-PVEAYGF 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D A + + D + +A K + H + ++ + + Sbjct: 148 RVEHEGRSLTYSGDT-GPAAALDQLAADSDLFLCEAAFTDGKEEIPDLHLNGRDAGESAQ 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLVLTHI 218 >gi|300088422|ref|YP_003758944.1| beta-lactamase domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528155|gb|ADJ26623.1| beta-lactamase domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 275 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 86/241 (35%), Gaps = 44/241 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHG----IDGLRGYFLKQK 103 R S +++D GP +QV + + ++DAV+ +H H DH I+ + + Sbjct: 36 RLSGKNLLLDPGPGCIVQVNKRGLAPETLDAVILSHRHLDHSGDTNVMIEAMTDGGFRGH 95 Query: 104 R----PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P D + + F + G Sbjct: 96 GEFFAPADAFGPEPVIFSYLRRF-----------------LSRVTVLAEGGRYDLDGLKF 138 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 E P+ +H + + G F + +AY TD F S D LII+ + Sbjct: 139 E-TPLRHRH-PVDTFGLVFHSDGRSLAYITDSRYFDELSRAY--RADLLIINVVLTEPRP 194 Query: 216 S--HFSLSESLKKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQF 266 + H +L ++ I + PK AILTH +++ + + T V+ A DGM Sbjct: 195 TIDHLTLKDAENIIADVRPKAAILTHFGMNVWRARPAEAAAQMTERTGIPVIAAQDGMTL 254 Query: 267 S 267 + Sbjct: 255 N 255 >gi|289674336|ref|ZP_06495226.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. syringae FF5] gi|330898851|gb|EGH30270.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. japonica str. M301072PT] gi|330979894|gb|EGH78194.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 303 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 97/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRTLRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + + IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLTWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|239931002|ref|ZP_04687955.1| hypothetical protein SghaA1_22471 [Streptomyces ghanaensis ATCC 14672] gi|291439375|ref|ZP_06578765.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291342270|gb|EFE69226.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 250 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDLGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R P+ VY Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCEPLPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + G H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPS------TFEIGPFTVHTERVAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D E ++ D + +A K + H + E+ + Sbjct: 148 RIEHGGRTLTYSGDT-GVSPALDELARDADLFLCEAAFTHGKENIPDLHLNGREAGETAA 206 Query: 229 LINPKNAILTHM 240 + ILTH+ Sbjct: 207 RARVRRLILTHI 218 >gi|145591332|ref|YP_001153334.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283100|gb|ABP50682.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 249 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 102/250 (40%), Gaps = 34/250 (13%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDG 94 RR R++ + + V+VD G + ++ V +D V TH H DH G+ Sbjct: 17 RRWRAANLVEA-----NGYLVVVDCGVGCHYRLSDRGVLGEVDYVFITHSHMDHFLGLPE 71 Query: 95 --LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + + ++K+PI ++A + + + + + I+ + + + Sbjct: 72 ALFQAHIEERKKPITIFAPSRVEDTIRAAAPHVLTNMRY--------AVNIKRIEPGVLL 123 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPA-ESLEKL-QNLDFLIID 207 + G +EA P H + GFR +V + D P SLE+L + +D LI + Sbjct: 124 EVPGLRVEAAP-ACHHTAEEAYGFRIRADVDVFFTGDTA--PGCTSLERLGEGVDVLIHE 180 Query: 208 ALKNGLHS------SHFSLSESLKKIELINPKNAILTHMHVDLD---YDMVLKSTPSRVV 258 A N + +H + ++L + E++ +N +L H+ + Y V ++ V Sbjct: 181 ATCNEDYREICAKYAHATTFQALAEAEVMMAENLVLNHIDERFNPTVYRDVRRAGRPAV- 239 Query: 259 PAFDGMQFSS 268 A D M Sbjct: 240 VAEDNMILKF 249 >gi|261403021|ref|YP_003247245.1| ribonuclease Z [Methanocaldococcus vulcanius M7] gi|261370014|gb|ACX72763.1| ribonuclease Z [Methanocaldococcus vulcanius M7] Length = 318 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 103/321 (32%), Gaps = 97/321 (30%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ VP KNR I ++ + + + D G + Sbjct: 3 SMKITFLGTGAA--VP-------------SKNRN-----HI-GIAFKFNGEVFLFDCGEN 41 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ I+ + TH H DHI GI GL F +++ + ++ + Sbjct: 42 IQRQMLFTEISPMKINHIFITHLHGDHILGIPGLLQSLGFFGREKELKIFGPEGTKDIIK 101 Query: 120 ES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + F Y + + Y E + + E I +H + S + Sbjct: 102 NALEFGYNYINYPIKVY---------EIKEKNPAIVLKEDDYEIITYPTKH-TVPSYAYI 151 Query: 178 F-------------------------------------GNVAYCTDV------------- 187 F G++ Y DV Sbjct: 152 FREIKKPRLDVKKALKLGVKVGPDLKKLKEGEAVKTENGSIVYPKDVLLPPKKGFCLAYS 211 Query: 188 -NAFPAESL-EKLQN--LDFLIIDAL-----KNGLHSS-HFSLSESLKKIELINPKNAIL 237 + P E + L++ D LI +A ++ + H ++ E++ L + K IL Sbjct: 212 GDTLPLEDFGQFLRDIKCDVLIHEATFDDQCRDTARENMHTTIGEAVNIARLAHVKVLIL 271 Query: 238 THMHVDLDYDMVLKSTPSRVV 258 TH+ D + K+ V Sbjct: 272 THISARYDKEEFFKTYLENVE 292 >gi|270308876|ref|YP_003330934.1| beta-lactamase domain protein [Dehalococcoides sp. VS] gi|270154768|gb|ACZ62606.1| beta-lactamase domain protein [Dehalococcoides sp. VS] Length = 257 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 88/255 (34%), Gaps = 54/255 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIVDTGP 62 T LG G + R S +I ++D GP Sbjct: 9 SLTFLGTGGA---------------------RFMVSRQILASGGIWLNLDGKRFLIDPGP 47 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPIDVYAAPDCM 115 +QV R + ++ A+L +H H DH ++ + +G F K + A D + Sbjct: 48 GSIVQVCRLGLNPENLSAILLSHRHLDHSGDVNVMIEAMTQGGFNKNGHFL---APKDAL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + Y P +N + + + + I+ + + + G Sbjct: 105 DNEPVIYSYL---------RPFLNNLTVLEEEHEYNLDG----IKVFTTRRHQHPVETYG 151 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIEL 229 F F + + +D F E + D LII+ + H S++++ + I Sbjct: 152 FIFESSNHRIGFVSDTRYF-EEIPQIYAGCDVLIINVVLRESIERIYHLSIADAARLITG 210 Query: 230 INPKNAILTHMHVDL 244 PK AILTH + L Sbjct: 211 AKPKTAILTHFGLQL 225 >gi|281603683|gb|ADA76667.1| hypothetical protein SFxv_4769 [Shigella flexneri 2002017] Length = 276 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 37/223 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 N T ++D G +Q+++ + ID +L TH H+DHI + Q + I Sbjct: 29 GNKTWLIDAGYGASLQLVKNNIPLRQIDNILLTHLHSDHILDYPSVLMNAWASGLQDKTI 88 Query: 107 DVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ P + F + P ++ DV + + Sbjct: 89 HVFGPPGTRAMTAASWQVFDRDITLRMEEEGKPDPR-KLVTAQDVGEGVVYKDDTVTVTA 147 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHS 215 + H + +RF + + D + FP + + D L+ +A+ + Sbjct: 148 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSYFPPLATFS--EGADILVHEAVHEPSVA 205 Query: 216 S------------------HFSLSESLKKIELINPKNAILTHM 240 H ++ + K K IL+H+ Sbjct: 206 KLADSIGNGKTLAKAIASHHTTIEDVGKIANEAKVKKLILSHL 248 >gi|325927560|ref|ZP_08188795.1| coenzyme PQQ biosynthesis protein B [Xanthomonas perforans 91-118] gi|325542065|gb|EGD13572.1| coenzyme PQQ biosynthesis protein B [Xanthomonas perforans 91-118] Length = 299 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 104/317 (32%), Gaps = 71/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTPASLRAWQQTDGAQRRTQASIAVSADGERW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFES--FR-----YCFKALDDRTYPPI-----VNPIVIENNDVPICMKSAGGVI 159 + L ++ F Y + P + + P + +GG + Sbjct: 112 NRVLGLLAQNPIFDAVNPQYVSRQPFALDTPLVLCGLQLTPFSVPGKVPLFMESRSGGDL 171 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 +LG + + Y A +LQ+ + + D Sbjct: 172 AG-------SDEETLGLTIDDGRHRMHYIPGCAAMTDALRARLQSAELVFFDGTLWRDDE 224 Query: 210 --------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 225 MVQLGVSQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNP--VLNTLSPEFAS 282 Query: 256 ----RVVPAFDGMQFSS 268 A DG++ + Sbjct: 283 ARASGWEVAHDGLEIAL 299 >gi|157869423|ref|XP_001683263.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224147|emb|CAJ04527.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 463 Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 40/175 (22%) Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN------------- 180 P+ + I A + +HG+ S+ + FG Sbjct: 288 RPLRMHLPITATAATAGGTDAASDLPFYSFPVEHGKGYISMAWVFGRGTAFKSRQTQQQQ 347 Query: 181 ----VAYCTDVNAFPAESLEKLQNL---DFLIIDALKN--GLHSSHFSLSESLKKIELIN 231 V Y +DV+ PA S+ LQ+L D L +D L + H+ + + + + Sbjct: 348 QGSCVVYISDVSHIPATSMAFLQDLVKIDVLFVDCLSPSGRVSPVHYCEDDMMALVVALK 407 Query: 232 PKNAILTHMHVDLDY----DMVLKSTPSR-------------VVPAFDGMQFSSP 269 P++ MH L++ + + S V ++DGMQ P Sbjct: 408 PRHVFGVGMHCALEHFKWMAELQNALDSHVAAGRLQAGEVQCVELSYDGMQVLLP 462 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 13/94 (13%) Query: 55 TVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------- 102 +++D G F ++R + ++D +L TH HAD + G+D LR Sbjct: 141 HILIDCGKTFRDAYFKVMIRCSIRTVDTLLLTHGHADAVAGLDDLRDLQTMHMVSTGDWV 200 Query: 103 -KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + Y +P +K L +S Y + + Sbjct: 201 IDSFVPTYLSPSTLKTLEKSVDYIIRNSVKSGHA 234 Score = 41.3 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 8/51 (15%) Query: 7 FTILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKISRVSER 50 T++G G S GVP I + DP+ P N R SL I+ Sbjct: 27 LTVVGSGVSTGVPVIGHLGRGCACEHAVADPSGP-NCRNNISLLITLPRRD 76 >gi|223997882|ref|XP_002288614.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975722|gb|EED94050.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 841 Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 102/296 (34%), Gaps = 59/296 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 G G++ VP C R + + + + ++++D G Sbjct: 514 ELLFTGTGSA--VP--------CK------HRNVTGMYLRM----NNGNSLLLDVGEGTV 553 Query: 66 MQVL----------------REQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPI 106 Q+L +V I AV +HPHADH GI L R PI Sbjct: 554 GQLLHLWKCYFTGDNVVDEYNSRVKGIKAVWISHPHADHHLGILRLLSERNVVCGSDDPI 613 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEAIPI 164 + A P+ L E R+Y + + I + + + + S G+ + + Sbjct: 614 VLMAPPNMFAFLSE--YQSVVPDIGRSYIAVDCRDMIYGKEHPMGKKLFSDLGITNCMSV 671 Query: 165 LQQHGR----ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGL 213 H + G FG V+Y D P+ ++ D LI +A + Sbjct: 672 PVAHCPHSFAVVIDGTSFGRVSYSGDCR--PSSRFAQVGYGSDLLIHEATFEDGMEEEAF 729 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR---VVPAFDGMQF 266 H ++ E++ + + LTH LK+TP+ + AFD M+ Sbjct: 730 LKRHSTVGEAIDIGQQMKASTICLTHFSQRYPRIPPLKTTPTDDLPIAFAFDYMRL 785 >gi|254831421|ref|ZP_05236076.1| hypothetical protein Lmon1_08708 [Listeria monocytogenes 10403S] Length = 306 Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 93/327 (28%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIDPGVIFEDEMFLVTADDLDHG-VRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAE----------------- 193 G + D + Sbjct: 152 KDKQGALNAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGD 211 Query: 194 ------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 LE N D L+ +A G + H + ++ K + N K ILTH+ Sbjct: 212 TRETSSELELALNADILVHEATFEGDKAKMAGEYMHSTTLQAAKLAKTANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAKTIFENTEIAYD 298 >gi|227825035|ref|ZP_03989867.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905534|gb|EEH91452.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 262 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 60/239 (25%) Query: 52 SNTTVIVDTGPDFYM--QVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G Q L+E+ + + TH H DHI G++ F + + Sbjct: 24 GPTAILIDAGISCRRIVQGLKERNLSPRDLGGIFLTHEHKDHIAGLE----VFARTYGEV 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++A+ L F+ +R ++ + G + P Sbjct: 80 PIFASEKTWTRL------PFRRTMNRDQMRVLPRSCV------------VGGLRIQPFSI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H I +G+ Y TD + + + LI++A ++ G + + Sbjct: 122 PHDAIDPVGYEIFYNERKCTYLTDCGFVTKTCEQAVDGAEALILEANHDEDMVRGGPYPA 181 Query: 217 -----------HFSLSESLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 H S + +E ++ P+ L H+ + ++P A+D Sbjct: 182 PLKARILGQEGHLSNRAAADLLEKVDVPPEVVFLAHLS-------EMNNSP---RLAYD 230 >gi|226492290|ref|NP_001146553.1| hypothetical protein LOC100280149 [Zea mays] gi|219887793|gb|ACL54271.1| unknown [Zea mays] Length = 141 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 19/104 (18%) Query: 2 KDYYHFTILGCGASLGVPRITG-------DWGACD------PTNPKNRRTRSSLKISRVS 48 LG G S +P G C P N R +SL I Sbjct: 38 SSSSSLIFLGTGCSGSLPDTRCLLKPSTPPCGVCSMGVSLPPERNPNYRLNTSLLIDYCH 97 Query: 49 ERGSNTTVIVDTGPDFYMQVLRE----QVLSIDA-VLYTHPHAD 87 + ++ +++D G F QVLR +V S+++ VL T H D Sbjct: 98 DE-THKYILIDIGKTFREQVLRWFVHHKVPSVNSRVLCTADHPD 140 >gi|290892130|ref|ZP_06555126.1| ribonuclease Z [Listeria monocytogenes FSL J2-071] gi|290558253|gb|EFD91771.1| ribonuclease Z [Listeria monocytogenes FSL J2-071] Length = 306 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 95/327 (29%), Gaps = 98/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER + + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGESDLTIYGPVGITEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S R + + I+ + + + I HG + S G+R Sbjct: 103 SLR--------LSGTRLTYKIIFNEIEPGLIFEDKMFSITVD--ELDHG-LRSFGYRIVE 151 Query: 179 ----------------------------GNVAYCTDVNAF-------------------- 190 G D + Sbjct: 152 KDKPGALNADKLIDDGVEPGPIFQKIKKGETVTLADGSVINGKDYIDEPQKGKIISIFGD 211 Query: 191 ---PAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 A LE N D L+ +A G H + ++ + N K ILTH+ Sbjct: 212 TKATASELELALNADVLVHEATFEGDKEKLAGEYMHSTTLQAASLAKKANVKKLILTHIS 271 Query: 242 VDLDYDMVLKSTP------SRVVPAFD 262 D D + A+D Sbjct: 272 SRYDRDASKELLIEAQSVFENTEIAYD 298 >gi|325661249|ref|ZP_08149876.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|331084995|ref|ZP_08334082.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472756|gb|EGC75967.1| hypothetical protein HMPREF0490_00609 [Lachnospiraceae bacterium 4_1_37FAA] gi|330408695|gb|EGG88160.1| hypothetical protein HMPREF0987_00385 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 265 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++DTG + L + +D +L TH H+DHI G+ +K I Sbjct: 20 DHTHLLIDTGISKKRIEEGLKNLEIKGEELDGILLTHEHSDHIQGLG-----VFSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA P ++ + E Y + +++ + K G + Sbjct: 75 PVYATPGTIRGVRE-------------YKKLGEIPDGLFHEIDVDQKFTLGDLSVEAFAI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H G+R +VA TD+ + ++ KLQNLD ++++A H H Sbjct: 122 SHDANEPSGYRIEQGGQSVAVATDLGIYDEYTVSKLQNLDAVLLEA----NHDIHM 173 >gi|323698361|ref|ZP_08110273.1| beta-lactamase-like protein [Desulfovibrio sp. ND132] gi|323458293|gb|EGB14158.1| beta-lactamase-like protein [Desulfovibrio desulfuricans ND132] Length = 293 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 91/286 (31%), Gaps = 69/286 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV-D 59 M+ + G VP P+ R + + R + +++ D Sbjct: 1 MRVRFR------GTRGSVPVPG----------PRTVRY--GGNTTCIEVRADDGNLLILD 42 Query: 60 TGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM- 115 G +++++ + D V TH H DHI G+ F+ + ++ D + Sbjct: 43 AGTGIRELGRELVQDGPAACD-VFITHTHWDHISGLPFFLPLFVP-GSRVTLHGPADPLN 100 Query: 116 -----KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L Y F + + + + G E P+L H Sbjct: 101 MTGIEAALARQMEYPFFPVRTAELAADIGYRTLAEGE-----TVDLGFAEVTPLLMNHPS 155 Query: 171 ISSLGFR----------------FGNV---------AYCTDVNAFPAESLEKLQNLDFLI 205 + G+ FGN+ AY V L++L+ +D L+ Sbjct: 156 -PNFGYLVRCDGRTLFFTGDHEPFGNIYAPGDEDYEAYEALVAERNHIVLDQLRGVDLLV 214 Query: 206 IDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 IDA + H S+ +L+ A+LTH D+D Sbjct: 215 IDAQYTPEEYERKRGWGHGSMDTALELARRAGVGRAVLTH--HDVD 258 >gi|260887568|ref|ZP_05898831.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|330837941|ref|YP_004412521.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|260862743|gb|EEX77243.1| VicX protein [Selenomonas sputigena ATCC 35185] gi|329745705|gb|AEB99061.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 292 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 50/229 (21%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + L S+D V TH H+DHI G+ L ++ + Sbjct: 58 DGTRLLIDAGISARRITRSLADLGVDAASLDGVFITHEHSDHIKGLP-----TLLKQYHL 112 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++A P ++ + ES V E+ P+ G + Sbjct: 113 PLFAPPATLRAIRES------------------LAVPEDTFTPLTGNVMLGAVSVKSFST 154 Query: 167 QHGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSH 217 H +S +G+ A TD+ + + ++ D LI++A L+ G + H Sbjct: 155 LHDAVSPVGYAVCGSEKCALATDLGFLTNDVMTAIEGADALILEANHDRELLQRGSYPWH 214 Query: 218 F------------SLSESLKKIE-LINPKNAILTHMHVDLDYDMVLKST 253 + + + + P+ L HM + + +++ T Sbjct: 215 LKQRILSNRGHLSNSAAAWALVRLKKRPRAVFLAHMSQENNRPELVEET 263 >gi|30065587|ref|NP_839758.1| hypothetical protein S4646 [Shigella flexneri 2a str. 2457T] gi|56480594|ref|NP_710085.2| hypothetical protein SF4376 [Shigella flexneri 2a str. 301] gi|30043851|gb|AAP19570.1| hypothetical protein S4646 [Shigella flexneri 2a str. 2457T] gi|56384145|gb|AAN45792.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|313646302|gb|EFS10764.1| metallo-beta-lactamase superfamily protein [Shigella flexneri 2a str. 2457T] Length = 255 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 37/223 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 N T ++D G +Q+++ + ID +L TH H+DHI + Q + I Sbjct: 8 GNKTWLIDAGYGASLQLVKNNIPLRQIDNILLTHLHSDHILDYPSVLMNAWASGLQDKTI 67 Query: 107 DVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ P + F + P ++ DV + + Sbjct: 68 HVFGPPGTRAMTAASWQVFDRDITLRMEEEGKPDPR-KLVTAQDVGEGVVYKDDTVTVTA 126 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHS 215 + H + +RF + + D + FP + + D L+ +A+ + Sbjct: 127 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSYFPPLATFS--EGADILVHEAVHEPSVA 184 Query: 216 S------------------HFSLSESLKKIELINPKNAILTHM 240 H ++ + K K IL+H+ Sbjct: 185 KLADSIGNGKTLAKAIASHHTTIEDVGKIANEAKVKKLILSHL 227 >gi|146282430|ref|YP_001172583.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas stutzeri A1501] gi|166989875|sp|A4VL90|PQQB_PSEU5 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|145570635|gb|ABP79741.1| coenzyme PQQ synthesis protein B [Pseudomonas stutzeri A1501] Length = 303 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 99/309 (32%), Gaps = 59/309 (19%) Query: 9 ILGCGASLGVPRITGDWGAC--DPTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C N RT+SS+ IS ++ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCAGLRAGTLNAKARTQSSIAISDNGVDW----ILCNASPDI 60 Query: 65 YMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ +I A++ DH G+ L++ P +V+ Sbjct: 61 RAQLESFPALQPARAPRDTAIGAIVLLDSQIDHTTGL-----LTLREGCPHEVWCTEMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAI---PILQQHGRI 171 + L F F L+ NPI + N +P C I P H Sbjct: 116 QDLTTGFP-LFNMLEHWNGGLKWNPIALSGNFSIPCCPNLHITPIPLRSSAPPYSPHRND 174 Query: 172 SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA---------LKN- 211 G G + Y + E L ++ D L++D ++ Sbjct: 175 PHPGDNIGLLIEDRNTGGTLFYAPGLGQVSEELLATMRRADCLLVDGTLWRDDEMLVREV 234 Query: 212 -GLHSSHF-SLSES-----LKKIELINPKNAILTHMHVD---LDYDMVLKST--PSRVVP 259 S L +S ++ ++ + IL H++ LD D V + + Sbjct: 235 GTKLGSEMGHLQQSGPGGMIEVLDGMPAVRKILIHINNTNPILDEDSVEREILGEHGIEV 294 Query: 260 AFDGMQFSS 268 A+DGM Sbjct: 295 AYDGMNIEL 303 >gi|295702771|ref|YP_003595846.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] gi|294800430|gb|ADF37496.1| Metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] Length = 243 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 26/222 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + ++VD G Q+ + + IDA++ +H H DH+ + + Sbjct: 20 SSYLVEH-----DGFQLLVDCGSGALAQLQKYAKPEEIDAMILSHYHHDHVA---DVGVF 71 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 R I + + Y D ++ + + + + + K G Sbjct: 72 QYA--RLIQTHLGNAVQELSIYGHTY-----DQESFNKLTHKGITKGVEYDPSQKLEVGP 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----K 210 + +H + R V Y D + E + + D LI + + Sbjct: 125 FTIEFMKTKH-PVVCYAMRISAGNQTVVYTADSSYL-EEFVSFSEEADLLICECNFYANQ 182 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +G + H + +E+ + K+ +LTH+ ++ +++ Sbjct: 183 DGRGAGHMTSTEAGTLASKASVKHLMLTHLPHYGEHQQLVEE 224 >gi|307353806|ref|YP_003894857.1| ribonuclease Z [Methanoplanus petrolearius DSM 11571] gi|307157039|gb|ADN36419.1| ribonuclease Z [Methanoplanus petrolearius DSM 11571] Length = 308 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 100/323 (30%), Gaps = 90/323 (27%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG +L P KN + + I R S+ T++ D G Q+ Sbjct: 5 FLGTSGALPTP-------------NKN---PACIMIRRGSD-----TLLFDCGEGAQQQM 43 Query: 69 LREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE----- 120 +R + ++DAV TH HADH G+ GL F+ +K P+ VY + + Sbjct: 44 MRAKTGFTVDAVFITHWHADHYLGLPGLVQTMSFMGRKEPLYVYGPRWVSEFVRSVISIS 103 Query: 121 ----SFRYCFKALDDRTYPPI----------------VNPIVIENNDV------------ 148 F L+ ++ P + I+ E+ Sbjct: 104 RNNLGFEMIPVELNHGSFVPFSGYTIRAFSTDHGMPSLGYILCEDERPGRFDREKAISLG 163 Query: 149 --------------PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P+ ++ G I +P G V Y D E Sbjct: 164 ISPGPLFGRLQRGSPVEVEKDGRTITILPSDVM--GEPRPG---RKVVYTGDTRPKSGEW 218 Query: 195 LEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH----VDL 244 ++ ++ D LI DA + H + ++ + I+ K+ L H+ Sbjct: 219 MDWARDCDLLIHDATFDDSEQERAMEVCHSTAGDAGRIASEISAKSLALVHISSRYVHMA 278 Query: 245 DYDMVLKSTPSRVVPAFDGMQFS 267 + + A D + + Sbjct: 279 SHIEDAGKYYEGNIFAPDDLTMT 301 >gi|238063130|ref|ZP_04607839.1| beta-lactamase [Micromonospora sp. ATCC 39149] gi|237884941|gb|EEP73769.1| beta-lactamase [Micromonospora sp. ATCC 39149] Length = 248 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 47/249 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S P A + R ++VD G Sbjct: 1 MRLTVLGCAGS--FPGPDSPCSA--------------YLVEAEGFR-----LLVDFGSGA 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKH 117 + R + + DA++ TH H DH+ +D +++ P + VYA Sbjct: 40 LSTLQRYAGLHAPDAIILTHLHCDHM--LDAASYVVVRRYAPDGPYPALPVYAPSGAPDR 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGF 176 L ++ ++D + P + + +E + +H GR+ Sbjct: 98 LALAYGQEDSTVEDVYQFYGLQPGTFPIGPFTVTVDRMNHPVETYGVRLEHDGRV----- 152 Query: 177 RFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALK----NGLHSSHFSLSESLKKIELIN 231 + Y +D P E+L +L Q+ D + +A H + E+ + Sbjct: 153 ----LCYSSDTA--PCEALLRLAQDADVFLCEASYLDGVENPPDLHLTGREAGEAATKAG 206 Query: 232 PKNAILTHM 240 +LTH+ Sbjct: 207 VGRLLLTHL 215 >gi|312796679|ref|YP_004029601.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Burkholderia rhizoxinica HKI 454] gi|312168454|emb|CBW75457.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Burkholderia rhizoxinica HKI 454] Length = 258 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 62/253 (24%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL + + + T V++D G + + L + ++ A++ TH HADHI Sbjct: 14 SLLVE-AQDGTTTTRVLLDCGFSARELERRLARLDVTLDALHAIVITHEHADHIG----- 67 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ I +Y + + + + +E + Sbjct: 68 SALAVARRASIPLYMSWGTAQAV-----------------GADDARGVEWRVLWGGEPVG 110 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G +E +P H L F FG+ V TDV ++ L D L+++ Sbjct: 111 IGDLEWLPYTVPHDAREPLQFVFGDGQHRVGVLTDVGTSTPHIIQMLDGCDGLVLECNHD 170 Query: 209 ------LKNGLH--------SSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLK 251 + H + E+ L I+ + + H+ Sbjct: 171 VRMLAQSRYPPSLKARVGGTHGHLNNDEAAAILAAIDRSKLRCIVAAHLSQ-------QN 223 Query: 252 STPSRVVPAFDGM 264 + P A D + Sbjct: 224 NLPE---LARDAL 233 >gi|83643721|ref|YP_432156.1| beta-lactamase superfamily hydrolase [Hahella chejuensis KCTC 2396] gi|83631764|gb|ABC27731.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Hahella chejuensis KCTC 2396] Length = 251 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 25/213 (11%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR 96 +S + + ++++D G ++ + ID VL TH HADH G+ L Sbjct: 17 CNTSFLLQSA-----DGSILIDCGYQVPPRLWAGDLHQNIDLVLLTHHHADHSFGVVPLL 71 Query: 97 GYFL--KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICM 152 +L K+ RP+ ++ + K+L + YP + IE + Sbjct: 72 VRYLEEKRTRPLKIWGPAGTETFI--------KSLLEHGYPGVSKYFKYTIEFAEFDTLD 123 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + H I +L +R + + D E++E +Q +D + + Sbjct: 124 SKQYGDVSIRCAPTVHS-IPNLLYRLDFNGRSFSISGDGK-LTPEAVELIQGVDLHLQEV 181 Query: 209 LKNGLH-SSHFSLSESLKKIELINPKNAILTHM 240 + + SH+S SE L+ + + +THM Sbjct: 182 YELNDNIPSHYSFSEVLQFAQSGGAASVGVTHM 214 >gi|262037909|ref|ZP_06011334.1| metal dependent hydrolase [Leptotrichia goodfellowii F0264] gi|261748052|gb|EEY35466.1| metal dependent hydrolase [Leptotrichia goodfellowii F0264] Length = 266 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 67/223 (30%), Gaps = 54/223 (24%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++D G + + + ID + TH H+DHI G+ L +K I Sbjct: 29 GKRKFLIDAGFSGKKTIEKLNNIERRIEDIDGIFVTHEHSDHIQGLG-----VLSRKFDI 83 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA--GGVIEAIPI 164 VY + E IE ++ + Sbjct: 84 PVYLHEITYGMIKEKVG------------------KIEKKNINFINEEKITIDDCVINSF 125 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLH 214 H LGF F +AY +DV E +N D +++ + L G + Sbjct: 126 EVMHDAEKCLGFTFEHEDKKLAYASDVGCTNNIIKENFKNSDVIVVESNYDYNMLMTGPY 185 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S +E+ K I + K L H+ D Sbjct: 186 HWELKNRVKGRNGHLSNAEASKLISQVMSDKLKKIYLMHISKD 228 >gi|261367345|ref|ZP_05980228.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282570105|gb|EFB75640.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 245 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 31/167 (18%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G + L + +L TH H+DH+ G+D +K P+ Sbjct: 3 DRSYLLVDMGKSCRTTLAALRKLDLAISDCAGILVTHEHSDHVAGLD-----TFLKKYPV 57 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA D ++ L T PP V I ++ G Sbjct: 58 PVYARADTLEVLESR----------GTLPPAVEGIAVDGGQ-----TMDVGHFRVTAFPT 102 Query: 167 QHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + G+R +A TD+ + L D + ++A Sbjct: 103 SH-DVPCCGYRIITPDQHRMAIATDLGVLTPVVEDNLMGCDLVALEA 148 >gi|188577402|ref|YP_001914331.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521854|gb|ACD59799.1| coenzyme PQQ biosynthesis protein B [Xanthomonas oryzae pv. oryzae PXO99A] Length = 294 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 107/312 (34%), Gaps = 71/312 (22%) Query: 10 LGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +G A G P+ A + RRT++S+ +S ER + +V+ PDF Sbjct: 1 MGSAAGGGHPQWNCHTPASLRAWQQADGAQRRTQASIAVSADGERWA----LVNASPDFR 56 Query: 66 MQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+L ++ + I+AVL T DHI G+ +R + +P ++A+P + Sbjct: 57 QQILATPALWPQQGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQPFALHASPRVLD 111 Query: 117 HLFES--FR-----YCFKALDDRTYPPIVNPIVIENNDVP-----ICMKSAGGVIEAIPI 164 L ++ F Y + P V+ + + VP +GG + Sbjct: 112 LLAQNPIFDAVNPQYVSRQPFTLNAPLTVSGLQLTPFSVPGKVPLFMESRSGGDLAG--- 168 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----------- 209 + +LG + V Y A +L + + D Sbjct: 169 ----SQEETLGLTIDDGQHRVHYIPGCAAMTDALRARLHGAELVFFDGTLWRDDEMVQLG 224 Query: 210 ---KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------R 256 K G H S+ ++ +N I H++ ++ +P Sbjct: 225 ISQKTGQRMGHMSIDGPEGTIAAFAPLNVARKIFIHLNTTNP--VLNTQSPEFASARASG 282 Query: 257 VVPAFDGMQFSS 268 A DG++ + Sbjct: 283 WEVAHDGLEIAL 294 >gi|145592874|ref|YP_001157171.1| beta-lactamase domain-containing protein [Salinispora tropica CNB-440] gi|145302211|gb|ABP52793.1| beta-lactamase domain protein [Salinispora tropica CNB-440] Length = 262 Score = 75.2 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 84/258 (32%), Gaps = 48/258 (18%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + FT+LGC P + S G V VD G Sbjct: 3 SEDLQFTVLGCATPY--PSVDNPC-------------------SGYLVTGGGARVWVDAG 41 Query: 62 PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPDC 114 Q+ R ++ +DA+ +H HADH D L Y+ ++ PI +Y P Sbjct: 42 SGTLAQLQRHVRLDELDAIWISHLHADHSA--DLLTAYYGALYADIQLAAPIPLYGPPGI 99 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L + T PI + +E ++ G + HG I + Sbjct: 100 ADRL------AHFLTNTATRSPIESAFAVEELHDGHRVE--VGALTLTSQAVAHG-IPAF 150 Query: 175 GFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HFSLSESLKK 226 R N + Y D P + + D L+ +A S+ H + ++ Sbjct: 151 ALRVDNAGRSLVYSGDTAPCPGLT-SLARGCDVLLCEAESAQAPSAGEQVHHTPEDAGDT 209 Query: 227 IELINPKNAILTHMHVDL 244 L + I+TH+ L Sbjct: 210 ARLAEARRLIVTHIGRFL 227 >gi|313203413|ref|YP_004042070.1| metallO-beta-lactamase superfamily hydrolase [Paludibacter propionicigenes WB4] gi|312442729|gb|ADQ79085.1| metallo-beta-lactamase superfamily hydrolase [Paludibacter propionicigenes WB4] Length = 267 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 74/237 (31%), Gaps = 61/237 (25%) Query: 56 VIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G +R+ + ++ V TH HADHI + + +K + + Sbjct: 27 LLIDAGLGVRS--IRKNLRNMGLDFENIWGVFVTHDHADHIKAVGP-----IGEKHRVPI 79 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + + YC + I IE G + H Sbjct: 80 YTTRKVHEGIQR--SYCVTEKLYSSRKYIEKNETIE-----------VGEFKVTAFPVSH 126 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS-- 216 ++G+ + TD+ E E L D+++++A L G + + Sbjct: 127 DATDNVGYTVEYKEKRFTFATDLGFVSEEVAEHLSKSDYMVLEANYDEQMLMQGSYPAYL 186 Query: 217 ---------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 H S ++ + K+ L H+ + + P A+ Sbjct: 187 KNRIIAKTGHLSNDQAGLFLSEAYNERIKHIFLCHLSRE-------NNLPE---LAY 233 >gi|73541468|ref|YP_295988.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ralstonia eutropha JMP134] gi|72118881|gb|AAZ61144.1| Coenzyme PQQ biosynthesis protein B [Ralstonia eutropha JMP134] Length = 305 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 112/317 (35%), Gaps = 74/317 (23%) Query: 9 ILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A G P+ + CD P RT+SS+ +S +++V+ Sbjct: 6 VLGSAAGGGFPQWNCNCHNCDGVRRGTVHATP---RTQSSIALSGDGPD----SILVNAS 58 Query: 62 PDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ + +I AVL DH+ G+ LR + ++ + ++A Sbjct: 59 PDILQQLRQTPALQPARSPRDTAIAAVLLMDAQIDHVTGLLMLR----EHRQALPLFATA 114 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHGRI 171 + L +F + L + + + P + GV + A+P+ + Sbjct: 115 AVLDDLSNAFP-LTRLLSHYCG---LQTHTLPCDGTPFSVPPLDGVMLTAVPLQSKAPPY 170 Query: 172 ------SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGL 213 LG G Y + + +L++ D +++D + Sbjct: 171 SPGRHAPRLGDNIGLRIEDRHSGRRAFYAPGLGSVDDHVFAELRSADVVLVDGTFWREDE 230 Query: 214 HSS------------HFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-- 256 S H LS ++ ++ ++ IL H++ ++++ +P Sbjct: 231 MRSLGFSTKAAADMGHLPLSGPGGMIEILDRLSASRKILIHINNTNP--VLVEDSPEHAV 288 Query: 257 -----VVPAFDGMQFSS 268 + A+DGM+ + Sbjct: 289 LARHGIELAYDGMEITL 305 >gi|283797774|ref|ZP_06346927.1| VicX protein [Clostridium sp. M62/1] gi|291074452|gb|EFE11816.1| VicX protein [Clostridium sp. M62/1] gi|295092013|emb|CBK78120.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Clostridium cf. saccharolyticum K10] Length = 265 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G Q L E + +D VL TH H+DH+ G+ L +K + Sbjct: 20 DHTHLLVDAGISNRRIEQGLNEIGIKGSELDGVLITHEHSDHVKGLG-----VLARKYGV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY+ + ++ + YP + V+ + D I G ++ P Sbjct: 75 PVYSTRETLEEIKGM-------KSLGDYPEELLRPVVHDVDFRI------GDLDIKPFKI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + +R +VA TD+ + +++ LQ LD +++++ L+ G + Sbjct: 122 SHDAANPVAYRVQEGRKSVAVATDMGNYSQYTIDHLQGLDAILLESNHDIKMLEAGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N K+ L H+ + +Y+ + T Sbjct: 182 YLKKRILGDYGHLSNDNAGRLLSCILHDNLKHIFLGHLSKENNYEELAYET 232 >gi|260464380|ref|ZP_05812571.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259029850|gb|EEW31135.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 284 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 101/305 (33%), Gaps = 67/305 (21%) Query: 6 HFTILGCGASLGVP--RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG S G P R G W SS + T++VD G Sbjct: 4 RLVLLG---SKGGPALRPGGPWP-------------SSSLLEI-----GGRTIVVDCGLG 42 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF 119 ++ + ++D + TH H+DH+ + L + P+ V+ P H + Sbjct: 43 VTHGLVDAGISLKALDLIFITHLHSDHVLELGPLIHTAWTAGLASPVSVFGPPGT-GHYW 101 Query: 120 ESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-S 173 F + + D P I + + I ++ +G ++ + H ++ Sbjct: 102 HRFCQAMEFDIEIRIADEGRPDIRDLVSINEFGEGQVLRQSG--LKVTALRVDHPPVTDC 159 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LKN 211 RF +V + D FP + + + D L+ +A L+ Sbjct: 160 FALRFDHDGKSVVFSADTAFFPPLA-DFAEGADILVHEAMLEEGIERLVARTGNGARLRE 218 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD--------MVLKSTPSRVVPAFDG 263 L +SH E+ + K +L H+ D + V K+ + A DG Sbjct: 219 HLLASHSFAEEAGRIASDAGVKRLVLNHLIPADDAEIGDADWVAAVRKTWAGDLTIARDG 278 Query: 264 MQFSS 268 + Sbjct: 279 LVVEL 283 >gi|134291938|ref|YP_001115707.1| pyrroloquinoline quinone biosynthesis protein PqqB [Burkholderia vietnamiensis G4] gi|134135127|gb|ABO59452.1| coenzyme PQQ biosynthesis protein B [Burkholderia vietnamiensis G4] Length = 307 Score = 75.2 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 106/322 (32%), Gaps = 73/322 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G+P+ + C + RT+SS+ +S V+V+ Sbjct: 1 MKIKILGSGAGGGLPQWNCNCSNCRRARTGSSGIVPRTQSSIAVSGNGVDW----VLVNA 56 Query: 61 GPDFYMQVLREQVL----------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q LR +I AV+ DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILTQ-LRADPDLQPARQIRDSAIAAVMLCDAQIDHVTGLLMLR----ERTSPLPLYA 111 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + ++ L L V+ I + + G A+P+ + Sbjct: 112 SAPVLEDLSTGLP-LVPLLGHYCG---VDVNPIALREPFAIAGAPGLRFTALPVDSKPPP 167 Query: 171 I----------SSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++ + A Y + +++ + +++D Sbjct: 168 YSPHRAASVPGDNIALLIQDTATGRQAFYAPGLADVDDGVRAAMRDAELVLVDGTFWTGT 227 Query: 209 --LKNGLHSSHF----SLSESLK-----KIELINP----KNAILTHMHVDLDYDMVLKST 253 + GL S H L++ IE + +LTH++ ++ + Sbjct: 228 EMIDLGLSSKHAADMGHLAQRGDAAHPGMIERLGVLPASTRKVLTHINNTNP--ILDPGS 285 Query: 254 PS-------RVVPAFDGMQFSS 268 P + A DGMQF Sbjct: 286 PERAQLREHGIEVAHDGMQFEV 307 >gi|85710093|ref|ZP_01041158.1| Arylsulfatase [Erythrobacter sp. NAP1] gi|85688803|gb|EAQ28807.1| Arylsulfatase [Erythrobacter sp. NAP1] Length = 336 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 86/257 (33%), Gaps = 40/257 (15%) Query: 12 CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVL 69 GA+L V + + +S + E +++D G Sbjct: 51 TGAALQV--LGSGGPIAEAARAG-----TSYLLWIDGEP----RLLIDAGAGSFLRFAEA 99 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAA------PDCMKHLFE- 120 + S+DA+L TH HADH + G+ G F + +P+ V P + L Sbjct: 100 GASIASLDAILLTHLHADHAGDLAGVLNSGGFEGRTQPLAVIGPDAAPRFPGTGEFLERL 159 Query: 121 ------SFRYCFKALDDRTYPPIVNPIVIENND--VPICMKSAGGVIEAIPILQQHGRIS 172 +F Y LD P++ I + + G HG + Sbjct: 160 LSKESGAFAYNGGYLDGTENKPLLEAQDITTAEGTAEATVLDVSGEYSVTAYPVHHGPVP 219 Query: 173 SLGFRFG----NVAYCTDVNAFPAESLEKLQNLD--FL----IIDALKNGLHSSHFSLSE 222 +LG+ + D +A LE L+ L +I+ + H + +E Sbjct: 220 ALGYAVEIGGASFVITGDQSALSQTFLEGLRGSQPTILFAHHVINGEQGQPRGLHRTPAE 279 Query: 223 SLKKIELINPKNAILTH 239 + +NP +LTH Sbjct: 280 IGQLAGALNPSRLLLTH 296 >gi|220932858|ref|YP_002509766.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219994168|gb|ACL70771.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 263 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 74/222 (33%), Gaps = 51/222 (22%) Query: 51 GSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD G R + +IDA+L TH H DHI G+ L ++ Sbjct: 21 DGKVNILVDAGLSGKEIARRLKKVGVDPGNIDAILVTHEHKDHIKGVG-----ILSRRYD 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I V+A K P + I N + + G + IP Sbjct: 76 IPVFANELTWKAAE----------------PCLGEIKSNNCKI-FDGDFSIGNLGVIPFS 118 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +GF F + TD+ P E+ L+ D LII+A L G + Sbjct: 119 SSHDAEDPVGFVFKCRNLKLGLATDMGIMPDEAKAYLKGSDLLIIEANHDLDMLMTGSYP 178 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + N +L H+ D Sbjct: 179 WFLKKRIRSAQGHLSNDDTAAILPELIEDNFPRILLAHLSQD 220 >gi|257065749|ref|YP_003152005.1| beta-lactamase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256797629|gb|ACV28284.1| beta-lactamase domain protein [Anaerococcus prevotii DSM 20548] Length = 263 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 49/218 (22%) Query: 53 NTTVIVDTGPDFY--MQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D G +L E+ +D + TH H DHI G L ++ I Sbjct: 22 GSRILIDAGFSGRKIENLLAQIGEKAKDLDGIFLTHEHNDHIQG-----AGVLSRRFDIP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA K F R + I+ + I +PI Sbjct: 77 IYANEGTWK--------AFAKKAKR-----LKEENIKIFKTNQFINFKSMDI--LPISIH 121 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS-- 215 H + +G+ ++ +D + +++ D ++ALK G + Sbjct: 122 HDAMEPVGYVIYLGNKKISLISDTGIIDEKIAYEIKGSDIYYMEANHDLEALKLGPYPHN 181 Query: 216 ---------SHFSLSE-SLKKIELI--NPKNAILTHMH 241 H S + + + + + L+H+ Sbjct: 182 LKLRVMGKMGHLSNDQSAEALADALVGKNETVFLSHLS 219 >gi|330970878|gb|EGH70944.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. aceris str. M302273PT] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 97/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + ++ IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLSWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEPRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|269121243|ref|YP_003309420.1| beta-lactamase [Sebaldella termitidis ATCC 33386] gi|268615121|gb|ACZ09489.1| beta-lactamase domain protein [Sebaldella termitidis ATCC 33386] Length = 256 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 58/237 (24%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N ++D G + + + + I+ +L TH H+DHI G+ L +K + Sbjct: 20 GNKRFLIDAGFSGKKTIEKLESINKNISDINGILITHEHSDHIQGLG-----VLSRKHDL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIPIL 165 +Y + + E IE+ ++ G Sbjct: 75 PIYISRQSYYSIKEKIG------------------KIEDKNLNFIEQDLIFGECFVKSFD 116 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H LGF F + Y +D+ E +N D ++ ++ L NG + Sbjct: 117 VMHDAERCLGFSFEYNSKKLTYASDIGFADKVVKENFKNSDVIVLESNYDLNMLMNGPYH 176 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMH-----VDLDYDMVLKST 253 H S E+ K I + K L H+ +L Y+ V + Sbjct: 177 WNLKNRVKSKNGHLSNGEAAKLIMEVATSRLKKVYLLHISGDNNTPELAYNTVKELL 233 >gi|220915549|ref|YP_002490853.1| ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1] gi|219953403|gb|ACL63787.1| ribonuclease Z [Anaeromyxobacter dehalogenans 2CP-1] Length = 318 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 96/326 (29%), Gaps = 82/326 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ P I R ++ + R +VD G Sbjct: 15 LRLTFLGTSAAQ--PTI---------------RRN----LTGHAVRRERELFLVDCGEGT 53 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHG-IDGLRGYFL-KQKRPIDVYAAPDCMKHLF-- 119 Q+++ + A+ +TH HADH G I LR + + P+D+Y + L Sbjct: 54 QRQLIQFGAGFDVAAIFFTHFHADHYLGAIGFLRTLSMQNRAEPLDLYGPRPAKRLLETM 113 Query: 120 -----ESFRYCFKALDDRTY-------------------------------PPIVNPIVI 143 E F Y + + R P +P Sbjct: 114 LFTGAERFSYEVRIHEVRAGEAVRRDGCAMVPFPTEHRTPSLGWALREDARPGRFHPDKA 173 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEK 197 E +P G + P+ GR + R + D A ++E Sbjct: 174 EALGIPKG-PLFGALQRGEPVTLPDGRTVRPEEVVEPARRGRALVITGDTRPC-AATVEA 231 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY----- 246 + D L+ D + + H + + + +LTH+ D Sbjct: 232 ARGADVLVHDCTFGDGEAERAEETLHSTARGAAQVAHDAGVVRLVLTHLSTRYDRAWEPL 291 Query: 247 -DMVLKSTPSRVVPAFDGMQFSSPIP 271 + + + A DGM P+P Sbjct: 292 VEQAREVWQGPLDVAHDGMVLEVPLP 317 >gi|313885575|ref|ZP_07819325.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619305|gb|EFR30744.1| metallo-beta-lactamase domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 283 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++VD G + Q + + +DA+L TH H DHIHG+ L +K Sbjct: 39 ESATTHLMVDAGLSGKRIEGLFQQIDRSLAQVDAILVTHEHKDHIHGVG-----VLSRKY 93 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + A ++ Y IEN ++ G I+ + Sbjct: 94 NLPIYANRKTWSVMANMIGKI--APENIKY--------IENEEM-----ITIGDIDVLTY 138 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH 214 H I + F TD + L+N D +LI I+ L+ G + Sbjct: 139 NVSHDAIQPQFYAFQRSKKQFVMLTDTGYVSQRLRDLLKNADAYLIESNHEIEMLRYGPY 198 Query: 215 S-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 H S + +L I+LI K+ L H+ D Sbjct: 199 PWSLKQRILSDKGHLSNEDGALAMIDLIGEKTKDIYLGHLSRD 241 >gi|66047895|ref|YP_237736.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. syringae B728a] gi|75500311|sp|Q4ZMC4|PQQB_PSEU2 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|63258602|gb|AAY39698.1| coenzyme PQQ synthesis protein B [Pseudomonas syringae pv. syringae B728a] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 97/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + ++ IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLSWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEPRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELARRNVEVAFDGMSIEL 303 >gi|146306994|ref|YP_001187459.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas mendocina ymp] gi|166989873|sp|A4XTR1|PQQB_PSEMY RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|145575195|gb|ABP84727.1| coenzyme PQQ biosynthesis protein B [Pseudomonas mendocina ymp] Length = 304 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 96/314 (30%), Gaps = 64/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ + C RT+SS+ IS E+ ++ + Sbjct: 1 MQIQILGSAAGGGFPQWNCNCRNCRGVRAGTLRAQPRTQSSIAISDEGEQW----ILCNA 56 Query: 61 GPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ +I ++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQIEAFPALQPARKLRDTAIAGIVLLDSQIDHCTGLLTLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI------PI 164 + L F F L + + +IE + P + + G I AI P Sbjct: 112 EMVHQDLTTGFP-LFNML--SHWNGGLQHRLIELDAKPFSIPACPGLRINAIALRSSAPP 168 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL----- 209 H G G Y + + L ++ D L++D Sbjct: 169 YSPHRGNPHPGDNIGLFIEDLRTGGTLFYAPGLGQVDEQLLGWMRRADCLLVDGTLWRDD 228 Query: 210 ---------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHV-----DLDYDMVLKS 252 K G H S ++ ++ + IL H++ DLD + Sbjct: 229 EMRVCEVGDKLGSEMGHLCQSGPGGMIELLDGLPTARKILIHINNTNPILDLDSPERAEL 288 Query: 253 TPSRVVPAFDGMQF 266 + AFDGM Sbjct: 289 DAHGIEVAFDGMSI 302 >gi|22298458|ref|NP_681705.1| ribonuclease Z [Thermosynechococcus elongatus BP-1] gi|41017555|sp|Q8DKE4|RNZ_THEEB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|22294638|dbj|BAC08467.1| ycf56 [Thermosynechococcus elongatus BP-1] Length = 407 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 61/180 (33%), Gaps = 38/180 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 T LG S GVP RTR SS+ + + + D G Sbjct: 1 MEITFLGT--SSGVP----------------TRTRNVSSVALRLPQRK---EIWLFDCGE 39 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 Q+LR + I + TH H DHI G+ GL IDVY P +++ Sbjct: 40 ATQHQLLRSDLRTSQIRRIFITHMHGDHIFGLMGLLASCGLAGTVSQIDVYGPPTLDRYI 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 R+ P + +E +V + G L H R+ + G+R Sbjct: 100 ASCLRW-----SVMRLPYKLQVHTVEPGEV-----FSDGEFTVTCRLLHH-RVPAFGYRV 148 >gi|330812178|ref|YP_004356640.1| coenzyme PQQ synthesis protein B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380286|gb|AEA71636.1| coenzyme PQQ synthesis protein B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 93/313 (29%), Gaps = 67/313 (21%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C D + RT+SS+ +S V+ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCANCAGFRDGSLRAQARTQSSIALSDDGVNW----VLCNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I A++ DH G+ LR Q V+ Sbjct: 61 RAQLQAFAPMQPGRALRDTGIGAIILMDSQIDHTTGLLSLREGCPHQ-----VWCTDMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQHG 169 + L F F L + ++ IE + +P+ H Sbjct: 116 EDLSTGFP-LFNMLTH--WNGGLSWNRIELDQSFTIAACPNLRFTPLPLRSAAPPYSPHR 172 Query: 170 RISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 G G + Y + LE + D L++D Sbjct: 173 FDPHPGDNIGLIVEDLRTGGKLFYAPGLGKVDESLLEIMAGSDCLLVDGTMWDDDEMQRR 232 Query: 210 -------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR------ 256 + H + L+ +E + +L H++ ++ + +P R Sbjct: 233 GVGTRTGREMGHLAQNGPGGMLEVLEQVPGPRKVLIHINNTNP--ILDEDSPERAELVRR 290 Query: 257 -VVPAFDGMQFSS 268 + ++DGM Sbjct: 291 KIEVSYDGMSIEL 303 >gi|260609519|gb|ACX47132.1| coenzyme PQQ synthesis protein [Pseudomonas putida] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 92/315 (29%), Gaps = 63/315 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S ++ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYD--MVLKST 253 + H + +L+ ++ + +L H++ LD + + Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVL 288 Query: 254 PSRVVPAFDGMQFSS 268 V AFDGM Sbjct: 289 RRGVEVAFDGMSIEL 303 >gi|313895738|ref|ZP_07829294.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975864|gb|EFR41323.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 251 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 82/249 (32%), Gaps = 63/249 (25%) Query: 41 SLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S+ + T ++VD G + R V SIDAVL TH H DH+ G+ Sbjct: 14 SVYVEL-----DGTRLLVDAGISAARIKKGLARHGVDLQSIDAVLVTHEHIDHVRGLK-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + + A ++++ D V+ + Sbjct: 67 ---TLSKQYRLPILATQGTLENI------------DGGEAFADEMHVVTG-------DFS 104 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIIDA--- 208 G + H GFR +YC TD+ ++ D L+++A Sbjct: 105 IGGVRIQSFATSHDAADPCGFRIEG-SYCFTLATDLGVVTDSVQAAIEGADVLVLEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELIN--PKNAILTHMHVD-----LDYD 247 L+ G + H + +E+ + + P+ L H+ + L +D Sbjct: 164 PEMLRRGSYPWTIKRRILSDRGHLANNEAAWALMRMKKRPRKVYLAHLSEENNRPALAHD 223 Query: 248 MVLKSTPSR 256 V + Sbjct: 224 TVQEILSGH 232 >gi|296333463|ref|ZP_06875916.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675031|ref|YP_003866703.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii str. W23] gi|296149661|gb|EFG90557.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413275|gb|ADM38394.1| ribonuclease Z [Bacillus subtilis subsp. spizizenii str. W23] Length = 307 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 96/334 (28%), Gaps = 98/334 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P R +S+ + + ER + + D G Sbjct: 1 MELLFLGTGA--GIPA--------------KTRNVTSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DH++G+ GL G Q + VY + Sbjct: 43 QHQILHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKLFIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S TYP ++ ++ + + HG + + G+R Sbjct: 103 SLA---VTKTHLTYPLVIK-------EIEEGIVFEDDQFIVTAVSVIHG-VEAFGYRVQE 151 Query: 179 ---------------------------------------------------GNVAYCTDV 187 G + Sbjct: 152 KDVPGSLKADVLKEMKIPPGPVYQRIKKGETVTLEDGRIINGNDFLEPPKKGRAVVLSGD 211 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 + E ++ D L+ +A H + ++ + K ILTH+ Sbjct: 212 TRVSDKLKELARDCDVLVHEATFAKGDRKLAYDYFHSTTEQAAVTAKEAGVKKLILTHIS 271 Query: 242 --VDLDYDMVLKSTPSRVVP----AFDGMQFSSP 269 D + L+ + V P A+D ++ S P Sbjct: 272 ARYQGDASLELQKEAADVFPNSVAAYDFLEVSVP 305 >gi|313496744|gb|ADR58110.1| PqqB [Pseudomonas putida BIRD-1] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 89/318 (27%), Gaps = 69/318 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S ++ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHV-----DLDYDMVL 250 + G H + E L + +L H++ D D Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNPILDEDSPERA 285 Query: 251 KSTPSRVVPAFDGMQFSS 268 + V AFDGM Sbjct: 286 EVLRRGVEVAFDGMSIEL 303 >gi|288935354|ref|YP_003439413.1| coenzyme PQQ biosynthesis protein B [Klebsiella variicola At-22] gi|290509405|ref|ZP_06548776.1| coenzyme PQQ biosynthesis protein B [Klebsiella sp. 1_1_55] gi|288890063|gb|ADC58381.1| coenzyme PQQ biosynthesis protein B [Klebsiella variicola At-22] gi|289778799|gb|EFD86796.1| coenzyme PQQ biosynthesis protein B [Klebsiella sp. 1_1_55] Length = 308 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 98/313 (31%), Gaps = 67/313 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C + RT+SS+ +S + V+ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCQGLRNGTIQASARTQSSIIVSDNGKEW----VLCNASPDI 60 Query: 65 YMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + SI ++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQIAHTPELNKPGVLRGTSIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L F F L R + + I A+PI S Sbjct: 116 EDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSPYR 172 Query: 176 FR---FGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 R NVA Y + L LQ D L+ID Sbjct: 173 DRPLPGHNVALFIENRRNGQTLFYAPGLGEPDEALLPWLQKADCLLIDGTVWQDDELQAA 232 Query: 210 ----KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP-------S 255 G H +LS+ + + + K IL H++ ++ + +P Sbjct: 233 GVGRNTGRDMGHLALSDEHGMMALLASLPAKRKILIHINNTNP--ILNEQSPQRQALTQQ 290 Query: 256 RVVPAFDGMQFSS 268 + ++DGM + Sbjct: 291 GIEVSWDGMAITL 303 >gi|329947437|ref|ZP_08294641.1| hypothetical protein HMPREF9056_02551 [Actinomyces sp. oral taxon 170 str. F0386] gi|328525187|gb|EGF52238.1| hypothetical protein HMPREF9056_02551 [Actinomyces sp. oral taxon 170 str. F0386] Length = 265 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 53/261 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT----TVIVDT 60 TI+GC S+ P+ SS + ++++D Sbjct: 1 MRLTIIGCSGSMSGPQ--------SSA--------SSYLVQADGVDADGALRTYSIVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCM 115 GP Q+LR +DA+ +H HADH+ + G+ Y P+ + + Sbjct: 45 GPGSMGQLLRHLDPAELDAIAISHCHADHMVDLVGMHVYRRWLPTGALGPVACLGPSELL 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRISSL 174 + L PP + +S + G + P H + + Sbjct: 105 ERLQ----------GVDGVPPSERYATEFGFVTAVPGRSYSVGPMVIAPFEALH-PVEAY 153 Query: 175 GFRFG-----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFS 219 G+R ++A+ D ++ + Q +D L+ +A ++ + H + Sbjct: 154 GYRIEGPSEADPSLRVSLAFTGDTDSC-QGMSDMAQGVDLLLAEAAFVEGRDTVGGMHMT 212 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 213 GRRAGELAAQAGAGHLVLTHI 233 >gi|289644630|ref|ZP_06476696.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] gi|289505558|gb|EFD26591.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] Length = 248 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 56/275 (20%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGC G G PR SS + +++D G Sbjct: 1 MKLTILGCSGTYPG-PRSAC----------------SSYLVE-----SDGFRLVLDAGNG 38 Query: 64 FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMK 116 ++ R + +DA+L +H H DH +D + + ++ P + VY + + Sbjct: 39 SMSELQRHCDLRDVDALLVSHLHGDHC--LDLVVNSYARRYHPEGMPPKLPVYGPINTQE 96 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L F+ + + I + I + + G H + + G Sbjct: 97 RLCS----AFERWPEDSLADIYDFRTISPGRLDV------GPFRIDLERVAH-PVEAFGM 145 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIE 228 R ++ Y D +A E ++ ++ D + ++ + + H S E+ + Sbjct: 146 RVTAEGRSLTYSGDTSAC-DELVQLARDTDLFLCESAFLDVPDNPPGVHLSGREAGEHAT 204 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 +LTH+ D + + AFDG Sbjct: 205 KAGVGRLVLTHLVPWGDAERSREEAAG----AFDG 235 >gi|225012429|ref|ZP_03702865.1| coenzyme PQQ synthesis protein B [Flavobacteria bacterium MS024-2A] gi|225003406|gb|EEG41380.1| coenzyme PQQ synthesis protein B [Flavobacteria bacterium MS024-2A] Length = 316 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 94/261 (36%), Gaps = 41/261 (15%) Query: 7 FTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G P + + C+ K +R ++L I +N++++ + PD Sbjct: 41 LTVLGTVQDGGSPHLACEKSCCNTLSHEQKEKRNVTALAILIPK---TNSSLLFEATPDI 97 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q S+ + TH H H G+ L L K I VY P L + Sbjct: 98 ISQWKELNKTSVS-IFLTHAHMGHYSGLMQLGREALGAKN-IPVYVMPKMSAFLSK---- 151 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRI--SSLGFRFG-- 179 + + +V+ IE + + + I P+L H ++G+R Sbjct: 152 ------NGPWSQLVSLKNIELIPLDKNKVATPSPEITVTPLLVPHRDEFSETVGYRIQGP 205 Query: 180 --NVAYCTDVNAFPAES---LEKLQNLDFLIIDAL---------KNGLHSSHFSLSESLK 225 V + D++ + +E L+ +D+ IDA + H + E++ Sbjct: 206 NKKVLFIPDIDKWSKWEFSLIELLEKVDYAFIDATFFDAKEINYRPISEIPHPLVKETIA 265 Query: 226 KI----ELINPKNAILTHMHV 242 + + + K HM+ Sbjct: 266 YLSSASKELKNK-VYFIHMNH 285 >gi|15615564|ref|NP_243868.1| hypothetical protein BH3002 [Bacillus halodurans C-125] gi|10175624|dbj|BAB06721.1| BH3002 [Bacillus halodurans C-125] Length = 244 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 39/221 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPI 106 T +++D G V + +D ++ +H H DH+ G+ + I Sbjct: 25 EQGETKLLLDCGSGVLSHVQAYCPLEELDGIVLSHYHQDHMADIGVFHYARLLQAGQGRI 84 Query: 107 ----DVYA---APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +Y P+ L +Y +V + + + G Sbjct: 85 KKQATIYGHRDDPETFSSL--------------SYKHVVRSETYDGLNPKV-----IGPF 125 Query: 160 EAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--- 212 + +H + R ++ Y D + F + + D LI + G Sbjct: 126 QFSFFKTKH-PVPCYAMRIEVEGQSLVYTADTSYFAELA-NFAEGCDLLIAECSAYGGTD 183 Query: 213 -LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + + E N + +LTH+ ++ ++ Sbjct: 184 LSDYGHMNSFDVGILAERTNARQLLLTHLPHHGQHEQLVAE 224 >gi|59891642|gb|AAX10039.1| beta-lactamase superfamily I metal-dependent hydrolase [Pseudomonas fluorescens] Length = 303 Score = 74.8 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 98/315 (31%), Gaps = 75/315 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG A G P+ + C ++ RT+SS+ IS V+ + P Sbjct: 5 ILGSAAGGGFPQWNCNCANC--AGFRDGSLRAEARTQSSIAISDDGVNW----VLCNASP 58 Query: 63 DFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 D Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 59 DIRAQLQSFAPMQPGRALRD--TGISAIILMDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 + L F F L + +N IE + +P+ Sbjct: 112 DMVHEDLTTGFP-LFTMLTH--WNGGLNWNRIELDQSFTVPACPNLRFTPLPLRSAAPPY 168 Query: 166 QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 H G G + Y + A L+ + + D L++D Sbjct: 169 SPHRFDPHPGDNIGLIVEDLSTGGKLFYAPGLGKVDAPLLKIMASSDCLLVDGTMWDDDE 228 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-- 256 + H + L+ +E + + +L H++ ++ + +P R Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLEQLPKQRKVLIHINNTNP--ILDEDSPERAE 286 Query: 257 -----VVPAFDGMQF 266 V A+DGM Sbjct: 287 LARREVEVAYDGMSI 301 >gi|116694997|ref|YP_840573.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ralstonia eutropha H16] gi|123133193|sp|Q0K2D1|PQQB_RALEH RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|113529496|emb|CAJ95843.1| Coenzyme PQQ synthesis protein B [Ralstonia eutropha H16] Length = 305 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 106/319 (33%), Gaps = 72/319 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ + CD P RT+SS+ ++ ++V Sbjct: 3 SIRVLGSAAGGGFPQWNCNCHNCDGVRRGTVRATP---RTQSSIALTGDGPD----AILV 55 Query: 59 DTGPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ + +I AV+ DH+ G+ LR + + + +Y Sbjct: 56 NASPDILQQLRQAPALQPARAPRDTAIAAVVLMDAQIDHVTGLLMLR----EHREALPLY 111 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + L +F Y + + + G + AIP+ + Sbjct: 112 ATAAVLDDLGAAFP---LTRILSHYCGLRTHALPCDGTAFSVPPLDGLTLTAIPLESKAP 168 Query: 170 RI----------SSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 ++G R + Y + +L + D +++D Sbjct: 169 PYSPNRHAPRAGDNIGLRIEDRRSGRSAFYAPGLGRIDDHVFAELHSADIVLVDGTFWRD 228 Query: 210 ----------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 K+ H +LS ++ +E + IL H++ ++++ +P Sbjct: 229 DEMQAPGFSGKSAADMGHLALSGPGGMIEVLERLPASRKILIHINNTNP--VLVEDSPER 286 Query: 256 ------RVVPAFDGMQFSS 268 + A+DGM+ + Sbjct: 287 AELARHGIEVAYDGMEIAL 305 >gi|297538384|ref|YP_003674153.1| coenzyme PQQ biosynthesis protein B [Methylotenera sp. 301] gi|297257731|gb|ADI29576.1| coenzyme PQQ biosynthesis protein B [Methylotenera sp. 301] Length = 304 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 109/317 (34%), Gaps = 70/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG GA G P+ + C + RT+SS+ +S ++ + Sbjct: 1 MHIHVLGSGAGGGFPQWNCNCENCKGVRAGTIKASTRTQSSIAVSADGINW----ILFNA 56 Query: 61 GPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ +I A++ T DH+ G+ LR + +P ++Y Sbjct: 57 SPDIKKQLDDFPAFQPARLVRDTAISAIVITDAQIDHVTGLLTLR----EHNKPWEIYCT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGR 170 L F + Y +N I + + + AG A+P+L Sbjct: 113 DAVKDDLTTGFP----VFNILGYFRGINHHEIATDQSIFTIPTAAGIEFTAVPLLSNAPP 168 Query: 171 I------SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 G G ++ Y + LE ++N D +++D Sbjct: 169 YSPRRDKPLPGDNIGMHIKDTRTGKSLFYAPGLGVAEPHVLEYMRNADCILVDGTVWTDD 228 Query: 209 --LKNGLHSSHF----SLSES--------LKKIELINPKNAILTHMHVD---LDYDMVLK 251 K G+ + L +S L +E P+ IL H++ L+ D + Sbjct: 229 EMSKEGISNKRASEMGHLDQSSDGGIMSILNAMEK--PRK-ILIHINNTNPILNEDSSQR 285 Query: 252 ST--PSRVVPAFDGMQF 266 +T + + A+DGM Sbjct: 286 ATLNKAGIEVAYDGMDI 302 >gi|320529012|ref|ZP_08030104.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] gi|320138642|gb|EFW30532.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] Length = 251 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 83/248 (33%), Gaps = 56/248 (22%) Query: 41 SLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S+ + T ++VD G + R V SIDAVL TH H DH+ G+ Sbjct: 14 SVYVEL-----DGTRLLVDAGISAARIKKGLDRHGVDLQSIDAVLVTHEHIDHVRGLK-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + + A ++++ D + ++ + Sbjct: 67 ---TLSKQYRLPILATHGTLENI------------DGGAAFADDMHIVTG-------DFS 104 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + P H GFR TD+ ++ D L+++A Sbjct: 105 IGEVRVQPFATSHDAADPCGFRIEGSSCFTLATDLGVVTDGVQAAIEGADVLVLEANHDP 164 Query: 209 --LKNGLHS-----------SHFSLSESLKKIELIN--PKNAILTHMHVDLDYDMVLKST 253 L+ G + H + +E+ + + P+ L H+ + ++ + T Sbjct: 165 EMLRRGSYPWTIKRRILSDRGHLANNEAAWALMRMKKRPRKVYLAHLSEENNHPALAHDT 224 Query: 254 PSRVVPAF 261 V+ A Sbjct: 225 VQEVLSAH 232 >gi|312134969|ref|YP_004002307.1| beta-lactamase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775020|gb|ADQ04507.1| beta-lactamase domain protein [Caldicellulosiruptor owensensis OL] Length = 240 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 27/218 (12%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G ++L I ++ +H HADH + LR Y + + ID+Y + Sbjct: 30 NILIECGSGVLTRLLNFISFDDISFIICSHLHADHTSDLGVLRYYLASRGKEIDLYIPSE 89 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + Y I N + IE ++ I ++ + RI Sbjct: 90 PKEE------YNLIRKGVYRVKEIENNMEIEIGNLSIKFLEGQHPYKSFAV-----RIEE 138 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSSHFSLSESLK 225 G FG + D F E +E ++ D L+++A H S ++ + Sbjct: 139 DGKIFG---FSGDT-GFKEELIEFFKDADLLLLNAAYTDKEVEKIEPEKRFHLSPKQAAE 194 Query: 226 KIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPA 260 + N K +LTH+ + ++ M K +V Sbjct: 195 IAKKANAKLLVLTHIKPECNEKEHLMSAKDVFENIVLG 232 >gi|49084502|gb|AAT51205.1| PA1986 [synthetic construct] Length = 305 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 101/321 (31%), Gaps = 74/321 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 H ILG A G P+ + C P RT+SS+ +S ER ++ Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRDGSVAAQP---RTQSSIALSDDGERW----IL 53 Query: 58 VDTGPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ R + +I A++ DH G+ LR +V Sbjct: 54 CNASPDIRAQIAAFPALQPARRPRDTAIGAIVLLDSQIDHTTGLLSLREGCPH-----EV 108 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQ- 166 + + L E F F L + + I + P + + AIP+ Sbjct: 109 WCTQMVHQDLSEGFP-LFPML--SHWNGGLRHRPIALDGEPFAIPACPRLRFTAIPLRSS 165 Query: 167 -----QHGRISSLGFRFGNVAYCTDVNA----------FPAESLEKLQNLDFLIIDAL-- 209 H G G D LE ++ D L++D Sbjct: 166 APPYSPHRGDPHPGDNIGLFVEDLDSAGALFNAPGLGEVDEALLEWMRRADCLLVDGTLW 225 Query: 210 ------------KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVD---LDYDMV 249 K G H L++S L+ + + +L H++ LD Sbjct: 226 RDDEMLVCEVGDKLGRQMGH--LAQSGPGGMLEVLAKVPAARKVLIHINNTNPILDTASA 283 Query: 250 LKST--PSRVVPAFDGMQFSS 268 ++ S + A+DGM Sbjct: 284 ERAELDASGIEVAWDGMHIQL 304 >gi|257867919|ref|ZP_05647572.1| AtsA/ElaC family protein [Enterococcus casseliflavus EC30] gi|257874248|ref|ZP_05653901.1| AtsA/ElaC family protein [Enterococcus casseliflavus EC10] gi|257802002|gb|EEV30905.1| AtsA/ElaC family protein [Enterococcus casseliflavus EC30] gi|257808412|gb|EEV37234.1| AtsA/ElaC family protein [Enterococcus casseliflavus EC10] Length = 246 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 30/236 (12%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHA 86 C P N + I +++D G +Q+ + L +DAV+ TH H Sbjct: 8 CLGAYPYNGEGTTGYLIE-----SEGFHLLLDAGSTTLVQLEKILDPLDLDAVILTHYHH 62 Query: 87 DHIHGIDGLRGYFLKQ-------KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 DHI + L+ + Q ++ + +Y + H F++L ++ Sbjct: 63 DHIADLGVLQ--YYWQLYPGNEERQVLPIYGHGEDTVH--------FESLTMPGVTQGID 112 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 + E+ ++ + I + S G + D + + + Q Sbjct: 113 YLQTESLELGPFTITFMKTIHPVTCYAMRFVEKSTG---KVFVFTGD-SGYLESFVPFAQ 168 Query: 200 NLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 D + D N H +HF+ E+ + K +LTH+ D + + + Sbjct: 169 GADLFLADTYLFAGNERHKAHFTSKEAGEIAHAAQVKKLMLTHLPQHGDLEQLREE 224 >gi|307298430|ref|ZP_07578233.1| Metal-dependent hydrolase of the beta-lactamase superfamily I-like protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915595|gb|EFN45979.1| Metal-dependent hydrolase of the beta-lactamase superfamily I-like protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 278 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 100/305 (32%), Gaps = 68/305 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC---DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG A G P + D C P N R S++ + N +++D G Sbjct: 1 MRVLFLGTAAYEGHPNVFCDCDNCRKVREAGPDNFRLTSAVLV--------NDDLLIDFG 52 Query: 62 PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---------PIDVYA 110 P+ + + ++ +L TH H+DH++ L + + R P+ V A Sbjct: 53 PNIMAGAQKTGSTLFNVRTLLITHSHSDHLY----LPNFGYRMDRYNASYERLSPMSVLA 108 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +S + +P ++ IPI H Sbjct: 109 NSTVLSLISDSVYF--------------DPDKTILLMAEAYKETVLNDYSVIPIPAVHKV 154 Query: 171 ---ISSLGFRFGN----VAYCTDVNAFPAESLEKLQN-----LDFLIIDA----LKNGLH 214 +L F Y TD SL+ +++ LD + ID+ +K Sbjct: 155 KEGEQALLFLIKKKGKSFFYATDTGPLDEFSLKLIKSFLDSPLDLVAIDSTLGFMKEVTF 214 Query: 215 SSHFSLSESLKKIELINPKNAIL-----THMHVDLDY------DMVLKSTPSRVVPAFDG 263 H + + + +E + KN I+ + H Y ++ + A+DG Sbjct: 215 PYHQTAEQVVSTVETMR-KNGIMDDTTKIYAHHFSHYPNPTQGELERFYVRFGIAVAYDG 273 Query: 264 MQFSS 268 + Sbjct: 274 LSLEI 278 >gi|257866158|ref|ZP_05645811.1| ribonuclease Z [Enterococcus casseliflavus EC30] gi|257872488|ref|ZP_05652141.1| ribonuclease Z [Enterococcus casseliflavus EC10] gi|257800092|gb|EEV29144.1| ribonuclease Z [Enterococcus casseliflavus EC30] gi|257806652|gb|EEV35474.1| ribonuclease Z [Enterococcus casseliflavus EC10] Length = 318 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MELEFLGTGA--GVPA--------------KHRNVTSIALRLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 MQ+L + I+ + TH H DHI+G+ GL Q PI++Y ++ Sbjct: 43 QMQILHSTIRPRKIEKIFITHLHGDHIYGLPGLISSRSFQGGDTPIEIYGPKGIKAYVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 R + +YP E + I K E + HG I S G+R Sbjct: 103 VLR---ISQTKVSYP----LHFFEIEEEGILFKDQ--QFEVSCLRLDHG-IDSFGYRI 150 >gi|150016498|ref|YP_001308752.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902963|gb|ABR33796.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 235 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 72/213 (33%), Gaps = 54/213 (25%) Query: 56 VIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G +F Q L + + L TH H DH I + ID+Y + Sbjct: 23 LLLECGINFKEIKQGLDFDLSKVKGCLITHEHKDHSKAIKDVLA------AGIDIYMSKG 76 Query: 114 CMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + E + Y F L + + G IP +H Sbjct: 77 TAAGINLEDERYSYRFNYLRHK-------------------IPKHIGGFTIIPFSVEHDV 117 Query: 171 ISSLGF-----RFGNVAYCTDVNAFPAESLEKLQNLD-FLI-----------IDALKNGL 213 LGF + G + + TD +N++ LI + A + Sbjct: 118 NEPLGFLIYHPKIGKIVFATDTYYL----KPVFKNVNHILIECNYSEDILPQLPAWRART 173 Query: 214 HSSHFSLS---ESLKKIELINPKNAILTHMHVD 243 SH SL E+LK EL N K+ L H+ D Sbjct: 174 IKSHMSLETLKETLKSWELGNTKDITLIHISND 206 >gi|221059135|ref|XP_002260213.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|193810286|emb|CAQ41480.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 950 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 85/263 (32%), Gaps = 60/263 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S+ P S I V E N +++D G Sbjct: 665 SFYFLGTGCSM--PSTF---------------RNVSGIILNVEE---NFRIVLDFGEGSL 704 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVY 109 Q+ + SI V +H HADH G+ Y+L R + + Sbjct: 705 YQLYWMSQSWLHFSNTIKSIKVVFISHAHADHHMGL-----YYLLHMRRLLFPHLDDPLI 759 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P +K F F P+ EN +V + + P +H Sbjct: 760 LIPSTLKSWMNLFNELFFDK------PVNVLYNEENLEVKEKVGDDDSFVFLRPFKVKHV 813 Query: 170 R----ISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDA------LKNGLHSSHF 218 + I G G+V Y D P +N D LI +A L ++ +H Sbjct: 814 KESYGIKIEGKNIGSVVYSADTR--PCDNVKTFSKNCDILIHEATFDDELLDEAIYKNHS 871 Query: 219 SLSESLKKIELINPKNAILTHMH 241 + E+++ + K ILTH Sbjct: 872 TTHEAMQISLEVECKTLILTHFS 894 >gi|218438169|ref|YP_002376498.1| ribonuclease Z [Cyanothece sp. PCC 7424] gi|254808627|sp|B7K762|RNZ_CYAP7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218170897|gb|ACK69630.1| ribonuclease Z [Cyanothece sp. PCC 7424] Length = 318 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 60/178 (33%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RARNVSSVALRLPQRAEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + + + TH H DHI G+ GL P+D+Y P ++ Sbjct: 42 QHQLLRSDIKTSQLRRIFITHLHGDHIFGLMGLLASCGLAGNAQPVDLYGPPGLKDYIQA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y +R V P ++ ++ L +H RI + G+R Sbjct: 102 CSKYSHTHFGNRVQVYTVEPGLVYEDE----------EFTVTCDLLKH-RIPAFGYRI 148 >gi|16079441|ref|NP_390265.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. 168] gi|221310303|ref|ZP_03592150.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. 168] gi|221314627|ref|ZP_03596432.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319550|ref|ZP_03600844.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. JH642] gi|221323826|ref|ZP_03605120.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. SMY] gi|321311863|ref|YP_004204150.1| ribonuclease Z [Bacillus subtilis BSn5] gi|1731073|sp|P54548|RNZ_BACSU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|1303962|dbj|BAA12617.1| YqjK [Bacillus subtilis] gi|2634819|emb|CAB14316.1| ribonuclease Z [Bacillus subtilis subsp. subtilis str. 168] gi|291484821|dbj|BAI85896.1| ribonuclease Z [Bacillus subtilis subsp. natto BEST195] gi|320018137|gb|ADV93123.1| ribonuclease Z [Bacillus subtilis BSn5] Length = 307 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 100/329 (30%), Gaps = 88/329 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P +N +S+ + + ER + + D G Sbjct: 1 MELLFLGTGA--GIP-----------AKARNV---TSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA--------- 111 Q+L + I+ + TH H DH++G+ GL G Q + VY Sbjct: 43 QHQILHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIET 102 Query: 112 --PDCMKHLF------------------------------ESFRYCFKALDDRTYPPIVN 139 HL E+F Y + D Sbjct: 103 SLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADV 162 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-------FRFGNVAYCTDVNAFPA 192 + P+ K G + + GRI G + +V + D Sbjct: 163 LKEMNIPPGPVYQKIKKGET----VTLEDGRI-INGNDFLEPPKKGRSVVFSGDT-RVSD 216 Query: 193 ESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH--VDL 244 + E ++ D L+ +A H + ++ + K ILTH+ Sbjct: 217 KLKELARDCDVLVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQG 276 Query: 245 DYDMVLKSTPSRVVP----AFDGMQFSSP 269 D + L+ V P A+D ++ + P Sbjct: 277 DASLELQKEAVDVFPNSVAAYDFLEVNVP 305 >gi|192290549|ref|YP_001991154.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris TIE-1] gi|226704960|sp|B3QBS9|PQQB_RHOPT RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|192284298|gb|ACF00679.1| coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris TIE-1] Length = 308 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 25/175 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C +P+ RT++SL IS + +++ P Sbjct: 2 LRVIVLGAAAGGGVPQWNCGCPVCRAAFDDPRLARTQASLAISADNAHW----FLINASP 57 Query: 63 DFYMQVL-------REQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D Q++ R L I V+ T+ D + G+ +R + P +YA Sbjct: 58 DLRQQIIATPQLHPRAGALRHSPIAGVILTNGEVDAVAGLLSMR-----EGAPFSIYAHD 112 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L + F L++ P+ + P+ +E Sbjct: 113 KVLAILRAN--SIFNVLNESIVA--RRPVATDQPFEPLLPDGTPSGLEITAFEVP 163 >gi|291279522|ref|YP_003496357.1| hypothetical protein DEFDS_1132 [Deferribacter desulfuricans SSM1] gi|290754224|dbj|BAI80601.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 244 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 94/274 (34%), Gaps = 43/274 (15%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G+ + R +S + + +++D G Sbjct: 3 KLTVLGSGSVVQ----------------YEGRGSASYLLEI-----DDKKIVLDCGFYLL 41 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLFESF 122 ++ ++ V ID + +H H DH G+ + K KR VY+ P + Sbjct: 42 ERLEQKGVMADEIDYIFVSHKHPDHFMGLIHFL-FARKNKR---VYSDKPVTIFGFKGLK 97 Query: 123 RYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLGFR 177 Y FK + + P + +IE+ + G+ +H L F Sbjct: 98 EYIESFKNILGKWIEPDIEIHIIEDEERDF------GIFSYKLFKTKHTDESVGIVLNFN 151 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKNA 235 + Y +D F E +E + N D LI + LK H E L+ N Sbjct: 152 DKKLVYTSDTEYF-EELIEIVNNADLLIAECGKLKGEDFEGHMFYDEVLEIAVNSNISTL 210 Query: 236 ILTHMHVDLDYDMVLKSTPS-RVVPAFDGMQFSS 268 + +H + + D + + ++ A D M + Sbjct: 211 LFSHFYPETDKFYIDAKDYNFKIFKARDLMTLNI 244 >gi|281422702|ref|ZP_06253701.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] gi|281403181|gb|EFB33861.1| metallo-beta-lactamase family protein [Prevotella copri DSM 18205] Length = 295 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 46/235 (19%) Query: 52 SNTTVIVDTGPDFY---MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++++D G + + VL TH HADH+ + L + + Sbjct: 49 DTDSILIDVGVGIRILKKHFHNYGLRFEDVHHVLITHDHADHVKSVGSLSTDYH-----L 103 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + YC + + + ++ VI G + P Sbjct: 104 PVYTTRKVHQGIERN--YCVRKKIEPNHARVIEKNVI----------FTLGEFKITPFGV 151 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H ++G+ N TDV E + + ++L+++A L+ G + Sbjct: 152 PHDSTDNVGYFVECGGVNFCLITDVGHITEEMHDFIGRANYLVLEANHSVEMLQQGHYPQ 211 Query: 216 ----------SHFSLSESLK-KIELINPK--NAILTHMHVDLDYDMVLKSTPSRV 257 H S + + P+ + L H+ + ++ + + T ++ Sbjct: 212 YLKDRILGDNGHLSNDDCGEALANYATPELHHVWLCHLSEENNHPELARKTVEQI 266 >gi|212223398|ref|YP_002306634.1| ribonuclease Z [Thermococcus onnurineus NA1] gi|254808680|sp|B6YT50|RNZ_THEON RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|212008355|gb|ACJ15737.1| ribonuclease Z [Thermococcus onnurineus NA1] Length = 311 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 87/309 (28%), Gaps = 95/309 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G G+ P +N + ++ R ++ D G Sbjct: 2 LEVIFLGTG---GI----------MPNRERN--------VPAIALRYKGEIILFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ ++ + TH H DH G+ L +++P+ +Y Sbjct: 41 MRQMSTAKLSPMKVEKIFITHFHGDHYLGLAALIQTMNLWNREKPLHIYGPKYT------ 94 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 FR+ L+ + P + V E +V + G E +HG I +LG+ F Sbjct: 95 -FRFIQNFLNSGFFRPGFDIHVHEIGEVRLKF----GDYEIWSFKVEHG-IPALGYVFKE 148 Query: 180 ----------------------------------------------------NVAYCTDV 187 V Y D Sbjct: 149 KDKRGKFLPEKLAEYGLSEGPILGKLEKQGQIEWNGRIIRLEDVTGPRRKGVKVVYTGDT 208 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGL----HSSHFSLSESLKKIELINPKNAILTHMHVD 243 + +N D LI +A S H ++ E+ + + K L H Sbjct: 209 EPC-ERTRLFAENADLLIHEATYLRPEDRGDSYHTTVGEACEIAKKAKVKLLALFHRAFR 267 Query: 244 LDYDMVLKS 252 YD + Sbjct: 268 YTYDEYMAK 276 >gi|330954900|gb|EGH55160.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae Cit 7] Length = 303 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 96/319 (30%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGINW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQGFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + + IE + P+ Sbjct: 110 CTDMVHEDLSTGFP-LFEMLKH--WNGGLTWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 H G G + Y + EK+ + D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDDALAEKMHDADCLLVDGTMWDD 226 Query: 210 -------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS- 255 + H + L+ +E + +L H++ ++ + +P Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEGFPEQRKVLIHINNTNP--ILDEDSPER 284 Query: 256 ------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 285 AELVRRNVEVAFDGMSIEL 303 >gi|229149396|ref|ZP_04277632.1| Beta-lactamase domain protein [Bacillus cereus m1550] gi|228634038|gb|EEK90631.1| Beta-lactamase domain protein [Bacillus cereus m1550] Length = 244 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R G V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDGAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|296241882|ref|YP_003649369.1| RNAse Z [Thermosphaera aggregans DSM 11486] gi|296094466|gb|ADG90417.1| RNAse Z [Thermosphaera aggregans DSM 11486] Length = 250 Score = 74.4 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 56/281 (19%), Positives = 93/281 (33%), Gaps = 52/281 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG GA+ +P NR + + ++D G Sbjct: 2 NIRIYLLGTGAA--IPI--------------NRGLPCIAL------KADSNIYLLDVGEG 39 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLF 119 ++L+ + + V TH H DH G+ GL +K ++V A + + Sbjct: 40 CQSRMLKTGLSPLKVKTVFITHLHGDHYLGLFGLLQTMHLSNRKEALNVMAPKELFALIE 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + +D +N I I+ I K I IP H I + GF Sbjct: 100 KYMELRLMNIDF-----QLNFIDIDEGREYIDEK-----ITVIPYPVAH-TIPAHGFLVK 148 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLHS-SHFSLSESLKKIEL 229 ++Y D A ++E +N D LI A+K H H + ++ Sbjct: 149 AGRQVISYTGDT-GPSANTIEYSRNADILIHEATFTSAMKEEAHEQGHSTSGDAAMIASR 207 Query: 230 INPKNAILTHMHV----DLDYDMVLKSTPSRVVPAFDGMQF 266 K +LTH+ D + + V+ A D M Sbjct: 208 AGVKLLVLTHISARYSDDNELYIDASRFHKNVIVARDYMTL 248 >gi|269218710|ref|ZP_06162564.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces sp. oral taxon 848 str. F0332] gi|269211821|gb|EEZ78161.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces sp. oral taxon 848 str. F0332] Length = 264 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 89/272 (32%), Gaps = 52/272 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV-----IVD 59 T++GC S+ R + +S + + + + ++D Sbjct: 1 MRLTVIGCSGSMS-----------------GRFSAASAYLLQADGEDEDGRLRTYSAVLD 43 Query: 60 TGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PIDVYAAPDC 114 GP Q+L +DA++ +H H DH I G++ Y I VY+ D Sbjct: 44 FGPGAMGQLLNYLDPADLDAMVLSHLHTDHCADIIGMQVYRRWLPGGPLARIPVYSPGDG 103 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + D+ TY I DV G ++ H + + Sbjct: 104 QYRTRQ----LGGDPDEETYEGEFEFKQIGPGDV-----VEIGPMKLEAFAADH-TVPCV 153 Query: 175 GFRFGN----------VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSL 220 G R + Y D +E + +D L+ + ++ + H + Sbjct: 154 GLRVSGPSDLGPGKATLGYTGDT-DLCDTEVEMARGVDLLLSECAFEDGRDSVRGVHMTG 212 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 S + + + +LTH+ D + V +S Sbjct: 213 SRAGELAQRAGAARLLLTHLQPWTDPEAVRRS 244 >gi|154337579|ref|XP_001565022.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062061|emb|CAM45156.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 215 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 27/138 (19%) Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN------------------ 180 P P + +HG+ S+ + FG Sbjct: 17 PFEPRGPASPAAGSVGSSDLPFYSFPVEHGKGYISMAWVFGRGTAFKSQQTQQQGQHQPE 76 Query: 181 ---VAYCTDVNAFPAESLEKLQNL---DFLIIDALKNG--LHSSHFSLSESLKKIELINP 232 V Y +DV+ PA S+ LQ+L D L++D L +SH+ E++ + + P Sbjct: 77 GSCVVYISDVSNVPATSMAFLQDLVKIDVLVLDLLAEHGAPSASHYCADEAIPLVVALAP 136 Query: 233 KNAILTHMHVDLDYDMVL 250 + M L++ Sbjct: 137 RRTYFVGMFCSLEHHRTN 154 >gi|119513642|ref|ZP_01632649.1| ribonuclease Z [Nodularia spumigena CCY9414] gi|119461707|gb|EAW42737.1| ribonuclease Z [Nodularia spumigena CCY9414] Length = 319 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 89/301 (29%), Gaps = 95/301 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R ++D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEL--WLLDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + + + TH H DHI G+ GL +D+Y P +++ Sbjct: 42 QHQLLRSDLKMSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVQRVDLYGPPGLNEYIQA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 + RY +V P +I +D + H RI++ G+ Sbjct: 102 ATRYSHTHFSYPVKVHVVQPGIIYEDDEFT-----------VSCSLLHHRITAFGYRIAE 150 Query: 177 -----RFG---------------------------------------------NVAYCTD 186 RF +AYCTD Sbjct: 151 KDRPGRFDIEKAQALQIPSGPIYGKLKRGETVTLPDGRVINGNQLCGPTEIGRKIAYCTD 210 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + ++E Q+ D LI +A H + + + + + I+TH Sbjct: 211 TI-YSEGAVELAQDADVLIHEATFAHQDADLAFQRLHSTTTMAAQTALVAGAHKLIMTHF 269 Query: 241 H 241 Sbjct: 270 S 270 >gi|312136968|ref|YP_004004305.1| rnase z [Methanothermus fervidus DSM 2088] gi|311224687|gb|ADP77543.1| RNAse Z [Methanothermus fervidus DSM 2088] Length = 328 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 94/295 (31%), Gaps = 86/295 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG ++ VP R +S+ I +G + D G Sbjct: 2 MEVVFLGTSSA--VPS--------------KYRNHASIAI-----KGFGEIFLFDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ +V + + +H H DHI GI GL F +K+P+ +Y P +K + E Sbjct: 41 QRQMAIAKVSPMKVKRIFISHLHGDHILGIPGLIQSMGFRNRKKPLTIYGPPG-IKEVKE 99 Query: 121 SFRYC--FKALDDRTYPPIVNPIV------------------------IENNDVPICMKS 154 + F D I N + IE P ++ Sbjct: 100 AMMKLGEFSIDFDINVKEIKNEGIVFENEKYKIECIKTKHTTENYSYSIEEKKRPRFLRE 159 Query: 155 AGGVIEAIP---ILQQHGRISS-LGFRFG-------------NVAYCTDVNAFP-AESLE 196 + P + H I +G R V Y D P + +E Sbjct: 160 KAIKLGVKPGPAFSKLHRGIPVKVGDRIVKPEEVLGKPRKGIKVVYSGDT--VPHEKMIE 217 Query: 197 KLQNLDFLIID----------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D LI D AL+ G H + ++ K + N K +LTH+ Sbjct: 218 FAKDADLLIHDSTFEAGKENKALETG----HSTAKDAAKIAKEANVKYLVLTHLS 268 >gi|257878181|ref|ZP_05657834.1| ribonuclease Z [Enterococcus faecium 1,230,933] gi|257881036|ref|ZP_05660689.1| ribonuclease Z [Enterococcus faecium 1,231,502] gi|257884697|ref|ZP_05664350.1| ribonuclease Z [Enterococcus faecium 1,231,501] gi|257889621|ref|ZP_05669274.1| ribonuclease Z [Enterococcus faecium 1,231,410] gi|257892438|ref|ZP_05672091.1| ribonuclease Z [Enterococcus faecium 1,231,408] gi|260559227|ref|ZP_05831413.1| ribonuclease Z [Enterococcus faecium C68] gi|261207760|ref|ZP_05922445.1| ribonuclease Z [Enterococcus faecium TC 6] gi|289565835|ref|ZP_06446277.1| ribonuclease Z [Enterococcus faecium D344SRF] gi|293553444|ref|ZP_06674072.1| ribonuclease Z [Enterococcus faecium E1039] gi|293560345|ref|ZP_06676840.1| ribonuclease Z [Enterococcus faecium E1162] gi|293569803|ref|ZP_06680890.1| ribonuclease Z [Enterococcus faecium E1071] gi|294614050|ref|ZP_06693979.1| ribonuclease Z [Enterococcus faecium E1636] gi|294617214|ref|ZP_06696864.1| ribonuclease Z [Enterococcus faecium E1679] gi|294620548|ref|ZP_06699849.1| ribonuclease Z [Enterococcus faecium U0317] gi|314939158|ref|ZP_07846415.1| ribonuclease Z [Enterococcus faecium TX0133a04] gi|314943927|ref|ZP_07850644.1| ribonuclease Z [Enterococcus faecium TX0133C] gi|314948037|ref|ZP_07851440.1| ribonuclease Z [Enterococcus faecium TX0082] gi|314953288|ref|ZP_07856219.1| ribonuclease Z [Enterococcus faecium TX0133A] gi|314993367|ref|ZP_07858734.1| ribonuclease Z [Enterococcus faecium TX0133B] gi|314994953|ref|ZP_07860074.1| ribonuclease Z [Enterococcus faecium TX0133a01] gi|257812409|gb|EEV41167.1| ribonuclease Z [Enterococcus faecium 1,230,933] gi|257816694|gb|EEV44022.1| ribonuclease Z [Enterococcus faecium 1,231,502] gi|257820535|gb|EEV47683.1| ribonuclease Z [Enterococcus faecium 1,231,501] gi|257825981|gb|EEV52607.1| ribonuclease Z [Enterococcus faecium 1,231,410] gi|257828817|gb|EEV55424.1| ribonuclease Z [Enterococcus faecium 1,231,408] gi|260074984|gb|EEW63300.1| ribonuclease Z [Enterococcus faecium C68] gi|260078143|gb|EEW65849.1| ribonuclease Z [Enterococcus faecium TC 6] gi|289162378|gb|EFD10236.1| ribonuclease Z [Enterococcus faecium D344SRF] gi|291587551|gb|EFF19428.1| ribonuclease Z [Enterococcus faecium E1071] gi|291593096|gb|EFF24676.1| ribonuclease Z [Enterococcus faecium E1636] gi|291596527|gb|EFF27770.1| ribonuclease Z [Enterococcus faecium E1679] gi|291599785|gb|EFF30789.1| ribonuclease Z [Enterococcus faecium U0317] gi|291602321|gb|EFF32545.1| ribonuclease Z [Enterococcus faecium E1039] gi|291605690|gb|EFF35129.1| ribonuclease Z [Enterococcus faecium E1162] gi|313590810|gb|EFR69655.1| ribonuclease Z [Enterococcus faecium TX0133a01] gi|313592151|gb|EFR70996.1| ribonuclease Z [Enterococcus faecium TX0133B] gi|313594670|gb|EFR73515.1| ribonuclease Z [Enterococcus faecium TX0133A] gi|313597431|gb|EFR76276.1| ribonuclease Z [Enterococcus faecium TX0133C] gi|313641538|gb|EFS06118.1| ribonuclease Z [Enterococcus faecium TX0133a04] gi|313645517|gb|EFS10097.1| ribonuclease Z [Enterococcus faecium TX0082] Length = 313 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 93/291 (31%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MELQFLGTGA--GVPA--------------KHRNVTSIALKLLDER--NEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 MQ+LR + I + TH H DHI G+ GL Q P+++Y +++ Sbjct: 43 QMQILRTTIRPRKIGKIFITHLHGDHIFGLPGLISSRSFQGGDTPLEIYGPKGIEEYIKV 102 Query: 120 ------ESFRYCFKALDDRTYPPIVN-----------PIVIENNDVPICMKSAGGVIEA- 161 Y K ++ PI I++ + G ++ Sbjct: 103 SLGISQTRLSYPLKFIELNETAPIFTDQQFSVYTKKLNHGIDSFGYRVVEHDHKGELQVD 162 Query: 162 ------IPILQQHGRI------------SSLG------FRFGNVA-YCTDVNAFPAESLE 196 IP +G++ + G + G + D S+ Sbjct: 163 RLKELGIPAGPLYGKLKQGETIQLEDGRTINGKDFVGPDKKGRIVTILGDTRK-THNSVV 221 Query: 197 KLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D L+ D + + H + ++ + + K +LTH+ Sbjct: 222 LAENSDILVHESTFNKDEARMAHNYFHSTTHQAAEVAKEAQAKRLLLTHIS 272 >gi|225850517|ref|YP_002730751.1| metallo-beta-lactamase family protein [Persephonella marina EX-H1] gi|225645586|gb|ACO03772.1| metallo-beta-lactamase family protein [Persephonella marina EX-H1] Length = 255 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 98/282 (34%), Gaps = 50/282 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G V + R L ++ +++D GP Sbjct: 5 SITFLGTGGGRVV-VF------------RQIRYSGGLWVNI-----EGINILIDPGPGSL 46 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPD--CMKHLFE 120 +++ ID + +H H DH I+ + +KRP+ + APD Sbjct: 47 IRIFEFGFDPRDIDIIAVSHRHLDHCSDINAVIESATDSKKRPLKLLVAPDDVTGGDDPV 106 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 +Y ++ IE+ + ++ I+A P+ H + G +F Sbjct: 107 LLKYIKDGIER-----------IEHTEEGKEIEFGNLKIKA-PVKHIHEGAKTFGLQFST 154 Query: 179 --GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGL--HSSHFSLSESLKKIELINPK 233 Y F + L +N D ++ + SH S+ + K I+ + PK Sbjct: 155 GNKTFVYVP-CGKFYDKMLTGYPENADLMVFNTTFPRPVDGYSHLSIVDVEKMIKRLKPK 213 Query: 234 NAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 A+LTH + + + K+T VV A DGM+ Sbjct: 214 KAVLTHFSIPMLKADPIKLAKKINKTTDIPVVAAKDGMRIQF 255 >gi|257887532|ref|ZP_05667185.1| ribonuclease Z [Enterococcus faecium 1,141,733] gi|257823586|gb|EEV50518.1| ribonuclease Z [Enterococcus faecium 1,141,733] Length = 313 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 92/292 (31%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MELQFLGTGA--GVPA--------------KHRNVTSIALKLLDER--NEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 MQ+LR + I + TH H DHI G+ GL Q P+++Y +++ Sbjct: 43 QMQILRTTIRPRKIGKIFITHLHGDHIFGLPGLISSRSFQGGDTPLEIYGPKGIEEYIKV 102 Query: 120 ------ESFRY------------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 Y F Y +N I++ + G ++ Sbjct: 103 SLGISQTRLSYPLKFIELNETDPIFTDQQFSVYAKKLN-HGIDSFGYRVVEHDHKGELQV 161 Query: 162 -------IPILQQHGRI------------SSLGFRF------GNVA-YCTDVNAFPAESL 195 IP +G++ + G F G + D S+ Sbjct: 162 DRLKELGIPAGPLYGKLKQGETIQLKDGRTINGKDFVGPNKKGRIVTILGDTRK-THNSV 220 Query: 196 EKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D L+ D + + H + ++ + + K +LTH+ Sbjct: 221 VLAENSDILVHESTFNKDEARMAHNYFHSTTHQAAEVAKEAQAKRLLLTHIS 272 >gi|300855840|ref|YP_003780824.1| ribonuclease Z [Clostridium ljungdahlii DSM 13528] gi|300435955|gb|ADK15722.1| ribonuclease Z [Clostridium ljungdahlii DSM 13528] Length = 303 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 87/306 (28%), Gaps = 100/306 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG S+ VP R +S+ S + +++D G Sbjct: 2 LDLCLLGCGGSMPVP----------------DRYLTSMIASY-----NGKKLLIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + L ++ +ID +L+TH HADHI G+ GL R + + ++ Sbjct: 41 QVSLKILGCKIKNIDVILFTHFHADHIAGLPGLLLTIANSGRNMPITIIGPIGLRKVIEG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + P +N + + + G + HG + + Sbjct: 101 LM---------VIAPVLPYSINLLELCGKESYFE---KIGDFNIDVLPVDHG-MPCFAYS 147 Query: 178 FG---------------------------------------------------NVAYCTD 186 G V+YCTD Sbjct: 148 IGVDRNRKFDRDKALKNQVPLILWNRLQKGEKIEYGEKIYTPEMVLGDKRSGLKVSYCTD 207 Query: 187 VNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + E + ++ D I + + + H SE+ + LTH Sbjct: 208 -SRPTHELAQFVEKSDVFICEGMYGEDENISKAIQYKHMLFSEAAALAKRAEVGELWLTH 266 Query: 240 MHVDLD 245 + Sbjct: 267 FSPSMP 272 >gi|210612534|ref|ZP_03289352.1| hypothetical protein CLONEX_01554 [Clostridium nexile DSM 1787] gi|210151539|gb|EEA82546.1| hypothetical protein CLONEX_01554 [Clostridium nexile DSM 1787] Length = 265 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++DTG + + + +L TH H+DHI G+ +K I Sbjct: 20 DKTHLLIDTGISKKRIEEGLHEIGIKGEELGGILITHEHSDHIQGLG-----VFSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA ++ + Y I +V + + G ++ P Sbjct: 75 PIYATRGTIEGIKA-------------YKGIGKMPEGLLKEVTVDQMFSIGNLDIRPFAI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H GFR ++A TD+ + A ++E L+ LD ++++A H H Sbjct: 122 SHDANEPSGFRIEHDGKSLAVATDLGIYDAYTVENLKGLDAILLEA----NHDVHM 173 >gi|316977254|gb|EFV60381.1| zinc phosphodiesterase ELAC protein 2 [Trichinella spiralis] Length = 1028 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 97/296 (32%), Gaps = 62/296 (20%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG ++ V + S + + + V+ D G Y Q Sbjct: 425 TFLGTSSASPV-----------------KTRNVSALLIHL---DDGSAVLCDCGESTYSQ 464 Query: 68 V-LREQ-------VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI---DVYA-APD 113 LR + S+ + +H H DH G+ R + Q + V+ AP Sbjct: 465 AYLRYGADGIGPLLRSVKLIFISHMHGDHFFGLPTFLRRRFRAYQDCQLEYEPVFLVAPQ 524 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV------PICMKSAGGVIEAIPILQQ 167 + H+ F F + I+ + + + +E +P+ Sbjct: 525 NLLHILTMFE-SFSGSVKQLCKTILTHRLHPLTEQSQKHLQEAMLSLNVKRLEFVPVAHP 583 Query: 168 ---HGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSS 216 HG + + GN V Y D PA + Q D LI +A + + Sbjct: 584 MGAHGLVLTT---VGNKTVVYSGDTRPCPAL-VSAGQGADLLIHEATMEDDLAQEAVDKK 639 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMV----LKSTPSRVVPAFDGMQFSS 268 H ++SE++ + +LTH Y+ + + + AFD M+ S Sbjct: 640 HSTISEAIAVGRAMGAGFTLLTHFS--GRYNKLPLVDERHCSESIGLAFDFMRVSL 693 >gi|56752093|ref|YP_172794.1| ribonuclease Z [Synechococcus elongatus PCC 6301] gi|81300820|ref|YP_401028.1| ribonuclease Z [Synechococcus elongatus PCC 7942] gi|56687052|dbj|BAD80274.1| hypothetical protein YCF56 [Synechococcus elongatus PCC 6301] gi|81169701|gb|ABB58041.1| RNAse Z [Synechococcus elongatus PCC 7942] Length = 393 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 85/291 (29%), Gaps = 75/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RSRNVSAVALRLPQRAEV--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR ++ + + TH H DH+ G+ GL P ID+Y +L Sbjct: 42 QHQFLRSELRISQLRRIFVTHMHGDHVFGLMGLLASVGLAGNPERIDLYGPKPLRDYLQA 101 Query: 121 -----------------------------------------SFRYCFKALDDRTYPPIVN 139 +F Y + D + Sbjct: 102 CAQHSRTHINYPLQIATVQPGVIYEDAEIVVSCAPLHHRVPAFGYRIQERDRPGRFDVEK 161 Query: 140 PIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLG--FRFGNVAYCTDVNAFPAESLE 196 + PI + G + Q GR G R ++ YCTD F ++ Sbjct: 162 ARSLGIPPGPIYKQLKDGETVTLEDGRQIDGRQLC-GPTERGRSMVYCTDTI-FCESAIA 219 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 Q+ D LI ++ + H + + + + + + ILTH Sbjct: 220 LAQDADVLIHESTFSDRDREMAEQRLHATATMAAEVAKQAGVRQLILTHFS 270 >gi|268317462|ref|YP_003291181.1| beta-lactamase domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334996|gb|ACY48793.1| beta-lactamase domain protein [Rhodothermus marinus DSM 4252] Length = 248 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 37/218 (16%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA++ P RT + L + + +++D G D ++ Sbjct: 6 LLGTGAAVSDP----------------HRTTTMLAV-----ADEASLIVIDCGGDVVQRL 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHG--IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 L + + A++ TH H DH G + R + L ++ PI +Y + Sbjct: 45 LATGLDPVKLTALILTHEHPDHTSGFPLFMERIWLLGRREPIPIYGIHPAIDQARR---- 100 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 CF + T+ + E P + H + ++G RF + Sbjct: 101 CFDTYNTSTWQGLPERDWHEVPYEPGALVLENDRWRVRAWPVVH-PVPTVGLRFEHLPTG 159 Query: 181 --VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 +AY D +E +N D L+ +A G + Sbjct: 160 RVIAYSCDT-EPTDAVVELGRNADILVHEATGEGPGHT 196 >gi|227551356|ref|ZP_03981405.1| ribonuclease Z [Enterococcus faecium TX1330] gi|257896027|ref|ZP_05675680.1| ribonuclease Z [Enterococcus faecium Com12] gi|257898655|ref|ZP_05678308.1| ribonuclease Z [Enterococcus faecium Com15] gi|293378801|ref|ZP_06624958.1| ribonuclease Z [Enterococcus faecium PC4.1] gi|293570538|ref|ZP_06681593.1| ribonuclease Z [Enterococcus faecium E980] gi|227179475|gb|EEI60447.1| ribonuclease Z [Enterococcus faecium TX1330] gi|257832592|gb|EEV59013.1| ribonuclease Z [Enterococcus faecium Com12] gi|257836567|gb|EEV61641.1| ribonuclease Z [Enterococcus faecium Com15] gi|291609484|gb|EFF38751.1| ribonuclease Z [Enterococcus faecium E980] gi|292642594|gb|EFF60747.1| ribonuclease Z [Enterococcus faecium PC4.1] Length = 313 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 92/292 (31%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MELQFLGTGA--GVPA--------------KHRNVTSIALKLLDER--NEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 MQ+LR + I + TH H DHI G+ GL Q P+++Y +++ Sbjct: 43 QMQILRTTIRPRKIGKIFITHLHGDHIFGLPGLISSRSFQGGDTPLEIYGPKGIEEYIKV 102 Query: 120 ------ESFRY------------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 Y F Y +N I++ + G ++ Sbjct: 103 SLGISQTRLSYPLKFIELNETDPIFTDQQFSVYAKKLN-HGIDSFGYRVVEHDHKGELQV 161 Query: 162 -------IPILQQHGRI------------SSLGFRF------GNVA-YCTDVNAFPAESL 195 IP +G++ + G F G + D S+ Sbjct: 162 DRLKELGIPAGPLYGKLKQGETIQLEDGRTINGKDFVGPNKKGRIVTILGDTRK-THNSV 220 Query: 196 EKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D L+ D + + H + ++ + + K +LTH+ Sbjct: 221 VLAENSDILVHESTFNKDEARMAHNYFHSTTHQAAEVAKEAQAKRLLLTHIS 272 >gi|170726602|ref|YP_001760628.1| pyrroloquinoline quinone biosynthesis protein PqqB [Shewanella woodyi ATCC 51908] gi|169811949|gb|ACA86533.1| coenzyme PQQ biosynthesis protein B [Shewanella woodyi ATCC 51908] Length = 305 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 25/175 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ C+ RT+SS+ +S E V+++ Sbjct: 1 MQILILGSAAGGGFPQWNCHCDNCEGVRSGRIKAQARTQSSIAVSPDGENW----VLINA 56 Query: 61 GPDFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ ++ I A + + DH G+ L++ P+ VY Sbjct: 57 SPDIRQQINQSPQLWPDEGQRGTKIRAAVLSDSQIDHTTGL-----LTLREGLPLPVYCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK-SAGGVIEAIPIL 165 + L ++ F L + + + + + P ++ +G V +P+ Sbjct: 112 DVVHEDLSGAYP-LFNLL-SHWHGGLTHRAIGTDPQTPFTVEQVSGLVFYPVPLE 164 >gi|295402152|ref|ZP_06812111.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112728|ref|YP_003991044.1| beta-lactamase [Geobacillus sp. Y4.1MC1] gi|294975835|gb|EFG51454.1| beta-lactamase domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217829|gb|ADP76433.1| beta-lactamase domain protein [Geobacillus sp. Y4.1MC1] Length = 264 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 49/231 (21%) Query: 52 SNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G Q+ + + + A+L TH H+DHI G+ + +K + Sbjct: 22 EQHRLLVDAGLSGKQLEQLFAQIDRDLRELTAILVTHEHSDHIKGLG-----VIARKYQL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA K + I + + P+ + G +E Sbjct: 77 PIYANEKTWKAMEGL---------------IGDIPTEQKFIFPLGTVRSFGDLEVESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + F F +A TD ++N D I ++ L+ G + Sbjct: 122 SHDAAEPMFFVFHHEGKKLALITDTGYVSDRMKGIIKNADVFIFESNHDVEMLRMGRYPW 181 Query: 216 ----------SHFSLSES-LKKIELIN--PKNAILTHMHVDLDYDMVLKST 253 H S E+ L ++I K L H+ D + + + T Sbjct: 182 NVKRRILSDVGHVSNEEAGLALADVIGDRTKRIYLAHLSQDNNIKELARMT 232 >gi|195442272|ref|XP_002068882.1| GK18015 [Drosophila willistoni] gi|194164967|gb|EDW79868.1| GK18015 [Drosophila willistoni] Length = 745 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 98/309 (31%), Gaps = 86/309 (27%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + +++D G Y Sbjct: 435 RLIFLGTGS-------------CIPNKTRNV---SSILI----QTSVKGFILLDCGEGTY 474 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHG-------------------------I 92 Q++R E + + A+ +H HADH G I Sbjct: 475 GQIIRFFGQPKAQEVLEQLQAIYVSHLHADHHMGLIGLLRERKQLFPESPPLILLAPRQI 534 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + ++ Q I A L + + L D P + I V C Sbjct: 535 EPWLQFYHSQIEDI---ADSYT---LVANGDLLQQPLSDERLEP-LGITSISTCLVRHCP 587 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKN 211 + G + + +H V Y D P + +E ++ LI +A Sbjct: 588 NAFGISLT---LEAKHENEPI------KVTYSGDT--MPCLDLIELGRDSTILIHEATME 636 Query: 212 G------LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPA 260 +H ++S+++++ + K+ ILTH Y PS V A Sbjct: 637 DDLEEEARIKTHSTISQAIQQGRDMQAKHTILTHFSQR--YAK-CPRLPSVDDMKHVAIA 693 Query: 261 FDGMQFSSP 269 FD MQ + Sbjct: 694 FDNMQVTLE 702 >gi|323701934|ref|ZP_08113603.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] gi|323533020|gb|EGB22890.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] Length = 248 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 88/249 (35%), Gaps = 37/249 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR- 96 R S S + +++++TG ++L+ + +DAV+ +H H DH+ I LR Sbjct: 14 RCSGACSGYLLQEDGRSLLIETGNGVISRMLQHIDIQDLDAVIISHLHPDHVMDIYCLRH 73 Query: 97 ---GYFL--KQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + ++ + +Y + + E F F + VI+ Sbjct: 74 AIEAANREGRMEKLVPLYLPTGPAEEFNRIKE-FTKAF------------HIHVIDELPE 120 Query: 149 PICMKSAGGVIEAIPILQ--QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII 206 P + G ++ +P +S G + + Y D P ++ N D + Sbjct: 121 PKEVVIDGFKVKFVPGKHNLPAYSMSIEGSK--RLVYSGDTAYNPEL-VKLANNADLFLC 177 Query: 207 DALKNGLHS-----SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----V 257 +A + +H + ++ + + K ++TH + + + + V Sbjct: 178 EASGLEKDAAYLKENHLTARQAGELAKTAGVKRFMITHFYPEYVLTELQQQAAEGFGGPV 237 Query: 258 VPAFDGMQF 266 A +G Sbjct: 238 ELAREGYTL 246 >gi|255513710|gb|EET89975.1| ribonuclease Z [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 300 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 99/320 (30%), Gaps = 81/320 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG S K+R SS+ +SR T + D G Sbjct: 2 FRITILGSSGS---------------APTKDRSL-SSIAVSR-----EGTIYLFDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYF-----LKQKRPIDVY-------A 110 Q+LR + + A+ TH H DH+ GI G K+ P+ ++ A Sbjct: 41 QRQMLRYGLNISRVKAIFITHMHGDHVIGI---AGLVRTLSLYKRSEPLSIFVPRGYESA 97 Query: 111 APDCMKHLFESFRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH- 168 A +K Y K + I + + + + G L Sbjct: 98 AESLLKFDSAIMTYEIKVIGIKSGVVYRDEGIEVRAFKLVHSIPTYGYSFVEEGKLHFVK 157 Query: 169 GRISSLGFRFGNVA------------------------------YCTDVNAFPAESLEKL 198 + SLG + + Y +D A ++ Sbjct: 158 SKAESLGIKGKKFSEIQKKGKIKIDGKLIKLSEITYPEKEKKFTYASDTRP-AASTVIAA 216 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +N + L+ +A + H + +E+ + + K +LTH+ ++S Sbjct: 217 RNAELLVHEATYCADLERLARERKHSTAAEAAQVAKNAKVKKLVLTHISARYRNASQIRS 276 Query: 253 TPS----RVVPAFDGMQFSS 268 + V A DG ++ Sbjct: 277 EAAKVFRNVEVAEDGKEYEI 296 >gi|29831709|ref|NP_826343.1| hypothetical protein SAV_5166 [Streptomyces avermitilis MA-4680] gi|29608825|dbj|BAC72878.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 250 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R PI VY + Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCAPIPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + I G +H + + Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPSTFDI------GPFTVHTEKVRH-PVEAYAI 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D E ++ D + +A K + H + E+ + Sbjct: 148 RIEHGGRSLTYSGDT-GVTGALDELARDTDLFLCEAAFTHGKESIPDLHLNGREAGETAT 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLVLTHI 218 >gi|56422005|ref|YP_149323.1| hypothetical protein GK3470 [Geobacillus kaustophilus HTA426] gi|56381847|dbj|BAD77755.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 264 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 43/228 (18%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD G + + ++ R +DA+L TH H+DHI G+ L +K Sbjct: 22 DRQRLLVDAGLSGKQLEELFAEIGRHP-KQLDALLVTHEHSDHIKGLG-----VLARKYR 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA + + ++ + + P+ DV + Sbjct: 76 LPVYANEKTWRAMEQTVGDI--PPEQKFVFPLGAVRTF--GDVDVESFGVSHDAAEPMFY 131 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS---- 215 H + +A TD + ++N D + + L+ G + Sbjct: 132 VFH-------YEGKKLALLTDTGYVSERIKKTIENADVFVFESNHDVGMLRMGRYPWSVK 184 Query: 216 -------SHFSLSES-LKKIELIN--PKNAILTHMHVDLDYDMVLKST 253 H S E+ L ++I K L H+ D + + + T Sbjct: 185 RRILSDVGHISNEEAGLALADVIGDRTKQIYLAHLSQDNNMKELARMT 232 >gi|82702268|ref|YP_411834.1| Beta-lactamase-like [Nitrosospira multiformis ATCC 25196] gi|82410333|gb|ABB74442.1| Beta-lactamase-like protein [Nitrosospira multiformis ATCC 25196] Length = 257 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 31/168 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 NT +++D G V+R + +IDAV+ TH H+DHI G + + K Sbjct: 20 EAGNTRLLLDCGFTLRETVIRLARLGLEPDTIDAVVVTHEHSDHICG---VARFARKFG- 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+ ++ ++F + +IE + + G IE P Sbjct: 76 -IPVWLTHGTLRSAGKAFG------------KLPGVNIIEG-----YQRFSIGAIEVEPY 117 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H F FGN + TD L D L+++ Sbjct: 118 PVPHDAEEPAQFVFGNGSLRLGVLTDTGCSTPHIEAVLNECDALVLEC 165 >gi|320355007|ref|YP_004196346.1| beta-lactamase domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320123509|gb|ADW19055.1| beta-lactamase domain-containing protein [Desulfobulbus propionicus DSM 2032] Length = 257 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 60/243 (24%) Query: 50 RGSNTTVIVD---TGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D +G + + + + ++ A++ TH H DH+ GI + ++ Sbjct: 18 EAGTTRLLIDNGFSGKELIARLHSIDVRPETLTAIVVTHEHDDHVKGIG-----VVSRRF 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + + V E ++ + P Sbjct: 73 NLPVYANAATHRAAEQRVG-----------------QVRERHEFGTGESFTINDLHIHPF 115 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +GF + + YCTD L+N L+++A L+ G + Sbjct: 116 AVSHDTADPVGFVVSDGRSALGYCTDTGTITRLIRHHLRNCRALVLEANHDLQMLQQGPY 175 Query: 215 S-----------SHFSLSESLKKI-----ELINPKNAILTHMH-----VDLDYDMVLKST 253 H + ++SL+ E + +L H+ +L + Sbjct: 176 PFPLKQRVLSIQGHLANNDSLEFAGCLINERLRA--LVLAHLSEINNDPNLVRAEARRRL 233 Query: 254 PSR 256 P+ Sbjct: 234 PTG 236 >gi|166368148|ref|YP_001660421.1| ribonuclease Z [Microcystis aeruginosa NIES-843] gi|189043786|sp|B0JGG3|RNZ_MICAN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166090521|dbj|BAG05229.1| ribonuclease Z [Microcystis aeruginosa NIES-843] Length = 318 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEI--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+LR + I + TH H DHI G+ GL + ID+Y P +L Sbjct: 42 QHQLLRSDLKSSQIRRIFITHMHGDHIFGLMGLLASIGLAGSAQDIDIYGPPGLGDYLRA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y + L +R ++P ++ ++ L +H RI + G+R Sbjct: 102 CAKYSYTNLANRVRVHAISPGILYEDE----------EFTVSCQLLKH-RIPAHGYRI 148 >gi|226308845|ref|YP_002768805.1| adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Rhodococcus erythropolis PR4] gi|226187962|dbj|BAH36066.1| putative adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Rhodococcus erythropolis PR4] Length = 440 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 32/204 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG GA+ G P +C + R ++ + + +++D GP+ Sbjct: 1 MELVMLGTGAADGWPNPFCTCPSCLAALSRETIRGHTAALV--------DNRILLDCGPE 52 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 R + ++ +L TH H DH+ + L + + P+ V PD + + Sbjct: 53 VPRAASRFGRTLAHVEHILLTHSHPDHLGPMALLFRSWASRTEPLQVLGPPDALALCRD- 111 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + +P+ + + G + H + +L + + Sbjct: 112 ------------WVGPDDPVTFTPLETGQSIML--GTYRVRALEAAH-EVPTLLYDITDA 156 Query: 182 A-----YCTDVNAFPAESLEKLQN 200 + + TD P +++ L + Sbjct: 157 SGTRIFWATDTGPLPESTVDALAD 180 >gi|315650937|ref|ZP_07903977.1| metallo-beta-lactamase superfamily protein [Eubacterium saburreum DSM 3986] gi|315486783|gb|EFU77125.1| metallo-beta-lactamase superfamily protein [Eubacterium saburreum DSM 3986] Length = 264 Score = 74.0 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 48/219 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G + + L I + TH H+DHI G++ +K I Sbjct: 20 EKTHILVDAGISNKKIETRLNELGLCGSDISGIFLTHEHSDHIAGLE-----VFVRKNKI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A+ +++L + +Y Y + +E+ + G + Sbjct: 75 PVFASRGTLRYLEDRDKY---------YSIVDYFHTVESKK-----NISLGDLNIKAFDI 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H G+R +A TD+ + + + L +LD L+I+A L+ G + Sbjct: 121 DHDANEPFGYRVECGNKKIAVATDLGRYTMDIVNNLSDLDALLIEANHDIRMLETGPYPY 180 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S S K I I K L H+ Sbjct: 181 ELKRRILSNKGHLSNENSGKLICEILNDKIKKIFLGHLS 219 >gi|145593655|ref|YP_001157952.1| beta-lactamase domain-containing protein [Salinispora tropica CNB-440] gi|145302992|gb|ABP53574.1| beta-lactamase domain protein [Salinispora tropica CNB-440] Length = 248 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 83/253 (32%), Gaps = 55/253 (21%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGC G G P +P S + + ++VD G Sbjct: 1 MRLTVLGCAGTFPG------------PDSP------CSAYL----VEAAGFRLLVDFGSG 38 Query: 64 FYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAPDCMK 116 + R + + DAVL TH H DH +D +++ P+ VYA + Sbjct: 39 SLSTLQRYAGLHAPDAVLLTHLHGDHF--LDAAIYVVVRRYAPEGPYPPLPVYAPEGASE 96 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + D T + + PI G + H I + G Sbjct: 97 RLA-----ALGGVQDGTLEDVYQFSTLTPGTFPI------GPLTVTVDRVNH-PIETYGV 144 Query: 177 RFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG----LHSSHFSLSESLKKI 227 R + + Y +D P ++L KL Q D + +A H + E+ + Sbjct: 145 RLEHNGRLLCYSSDTA--PCDALLKLAQGADVFLCEASYLDGVDNPPDLHLTGGEAGEVA 202 Query: 228 ELINPKNAILTHM 240 +LTH+ Sbjct: 203 TKAGVGRLLLTHL 215 >gi|26987121|ref|NP_742546.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas putida KT2440] gi|32129888|sp|Q88QV5|PQQB_PSEPK RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|24981751|gb|AAN66010.1|AE016230_1 coenzyme PQQ synthesis protein B [Pseudomonas putida KT2440] Length = 303 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 90/318 (28%), Gaps = 69/318 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S ++ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVD---LDYD--MVL 250 + G H + E L + +L H++ LD + Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNPILDENSPERA 285 Query: 251 KSTPSRVVPAFDGMQFSS 268 + V AFDGM Sbjct: 286 EVLRRGVEVAFDGMSIEL 303 >gi|261420879|ref|YP_003254561.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|297531664|ref|YP_003672939.1| beta-lactamase [Geobacillus sp. C56-T3] gi|319768550|ref|YP_004134051.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261377336|gb|ACX80079.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|297254916|gb|ADI28362.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] gi|317113416|gb|ADU95908.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 264 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 81/247 (32%), Gaps = 48/247 (19%) Query: 38 TRSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHA 86 R S+ S + ++VD G + + ++ R +DA+L TH H+ Sbjct: 3 MRFSVLASGSTGNAFYIETDRQRLLVDAGLSGKQLEELFAEIGRHP-KQLDALLVTHEHS 61 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DHI G+ L +K + VYA + + ++ + + P+ Sbjct: 62 DHIKGLG-----VLARKYRLPVYANEKTWRAMEQAVGDI--PPEQKFVFPLGAVRTF--G 112 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI- 205 DV + H + +A TD + ++N D + Sbjct: 113 DVDVESFGVSHDAAEPMFYVFH-------YEGKKLALLTDTGYVSERIKKTIENADVFVF 165 Query: 206 -----IDALKNGLHS-----------SHFSLSES-LKKIELIN--PKNAILTHMHVDLDY 246 + L+ G + H S E+ L ++I K L H+ D + Sbjct: 166 ESNHDVGMLRMGRYPWSVKRRILSDVGHISNEEAGLALADVIGDRTKQIYLAHLSQDNNM 225 Query: 247 DMVLKST 253 + + T Sbjct: 226 KELARMT 232 >gi|257876812|ref|ZP_05656465.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] gi|257810978|gb|EEV39798.1| conserved hypothetical protein [Enterococcus casseliflavus EC20] Length = 246 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 84/242 (34%), Gaps = 42/242 (17%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHA 86 C P N + I +++D G +Q+ + L +DAV+ TH H Sbjct: 8 CLGAYPYNGEGTTGYLIE-----SEGFHLLLDAGSTTLVQLEKILDPLDLDAVILTHYHH 62 Query: 87 DHIHGIDGLRGYFLKQ-------KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 DHI + L+ + Q ++ + +Y + H F++L ++ Sbjct: 63 DHIADLGVLQ--YYWQLYPGSEERQVLPIYGHGEDKVH--------FESLTMPGVTQGID 112 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAE 193 + E+ ++ G + H ++ RF + D + + Sbjct: 113 YLQTESLEL--------GPFTITFMKTIH-PVTCYAMRFVEKNTGKVFVFTGD-SGYLES 162 Query: 194 SLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + Q D + D N H +HF+ E+ + K +LTH+ D + + Sbjct: 163 FVPFAQGADLFLADTYLFAGNERHKAHFTSKEAGEIAHAAQVKKLMLTHLPQHGDLEQLR 222 Query: 251 KS 252 + Sbjct: 223 EE 224 >gi|222529118|ref|YP_002573000.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455965|gb|ACM60227.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 240 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 35/235 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R ++++ G ++L I ++ +H HADH + LR Y + + ID+ Sbjct: 25 RTKEANILLECGSGVLTRLLNFISFDEISFIICSHLHADHTSDLGVLRYYLASRGKEIDL 84 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + K D + IENN M++ G + + QH Sbjct: 85 YIPSE------------PKEEYDLIRKGVYRVKEIENN-----MEAKIGNLTIKFLEGQH 127 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSS 216 S + + D F E +E ++ D L+++A Sbjct: 128 -PYKSFAVKIEVDDKVFGFSGDT-GFKEELIEFFKDADILLLNAAYTDKEVEKIEPEKRF 185 Query: 217 HFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H S ++ + + N K +LTH+ + ++ + K VV A D Sbjct: 186 HLSPKQAAEIAKRANAKLLVLTHLKPECSEKEHLLSAKEVFENVVLATDNDTIEF 240 >gi|194014605|ref|ZP_03053222.1| YhfI [Bacillus pumilus ATCC 7061] gi|194013631|gb|EDW23196.1| YhfI [Bacillus pumilus ATCC 7061] Length = 249 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 80/240 (33%), Gaps = 43/240 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG---YFLKQKR- 104 ++VD G ++ + + +DAVL +H H DHI I L+ + Sbjct: 27 ESDGFRLLVDCGSGVLSKLQQYIDIEELDAVLLSHYHHDHIADIGPLQYAKLVGYHLGKS 86 Query: 105 --PIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P+ +Y + L + + Y P G Sbjct: 87 SGPLPIYGHTGNQEAFGRLADD-----VHTKAKAYQP--------------EEGIQIGPF 127 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID----ALKN 211 + + H R V Y D +++ + ++ D LI + A ++ Sbjct: 128 QIDFLKTVH-PAECYAMRIQAGDAVVVYTAD-SSYQEAFIPFSKDADLLIAESNFYAGQD 185 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 G + H + +E K + N I+TH+ + ++ + + A G++++ Sbjct: 186 GSSAGHMNSTEVGKLAKEANVGELIITHLPHFGRHKDLVNEAQALYTGNIQLAHSGLRWN 245 >gi|21221355|ref|NP_627134.1| hypothetical protein SCO2908 [Streptomyces coelicolor A3(2)] gi|256787465|ref|ZP_05525896.1| hypothetical protein SlivT_23501 [Streptomyces lividans TK24] gi|289771362|ref|ZP_06530740.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|5531357|emb|CAB50989.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|289701561|gb|EFD68990.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 250 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 81/250 (32%), Gaps = 46/250 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R P+ VY Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHDGGRCAPLPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L ++ A V P E + + +EA + +HG Sbjct: 98 RLTTAYADTPSASSMSEVFDFHTVKPSTFEVGPFTVHTERVAHPVEAYAVRVEHGG---- 153 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELI 230 ++ Y D A P E ++ D + +A K + H + E+ + Sbjct: 154 ----RSLTYSGDTGATPVLD-ELARDTDLFLCEAAFTHGKENIPDLHLNGREAGQSAARA 208 Query: 231 NPKNAILTHM 240 + +LTH+ Sbjct: 209 GARRLVLTHI 218 >gi|255521968|ref|ZP_05389205.1| hypothetical protein LmonocFSL_12232 [Listeria monocytogenes FSL J1-175] Length = 251 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 63/182 (34%), Gaps = 33/182 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK LG GA GVP R +S+ +S ++ER NT + D Sbjct: 1 MKQIMELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDC 42 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMK 116 G Q++R Q+ ++ + TH H DHI G+ GL Q + +Y + Sbjct: 43 GEATQHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAE 102 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 ++ S I ++ + + HG + S G+ Sbjct: 103 YVETSL----------RLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHG-VRSFGY 151 Query: 177 RF 178 R Sbjct: 152 RI 153 >gi|307329931|ref|ZP_07609084.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|306884422|gb|EFN15455.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 250 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 83/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +DAVL +H H DH ID + + R I VY D + Sbjct: 40 LGELQRHCGLYDLDAVLLSHLHPDHF--IDMCGYFVARYYRHDGGRAEAIPVYGPEDTER 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L +++ D+++ + + + I G H + + GF Sbjct: 98 RLVQAYDDL---PDEKSMREVFDFRTLTPGSFDI------GPFTIRAERVCH-PVEAFGF 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D ++ + D + +A K + H + ++ + Sbjct: 148 RIEYGGRSLVYSGDTGPC-EALVDLARGGDLFLCEAAFTHGKEDIPELHLNGRQAGEHAL 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGVGSMVLTHI 218 >gi|288802423|ref|ZP_06407862.1| metallo-beta-lactamase superfamily protein [Prevotella melaninogenica D18] gi|288334951|gb|EFC73387.1| metallo-beta-lactamase superfamily protein [Prevotella melaninogenica D18] Length = 267 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + VL TH HADH+ + + G + Sbjct: 20 DTDCLMIDCGVGIRSLKKHFHNYGLQLNMVHNVLITHDHADHVKSVGSISG-----DLQL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + + ++ +C + D+ Y V + G + P Sbjct: 75 PVYTTEDVHRGISQN--WCVRRKVDQQYVKFVQ----------KGEEITIGEFKVTPFGV 122 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ TD E + + ++L+I+A L G + Sbjct: 123 PHDSTDCVGYSVEYEGIRFTLITDCGHITDEIAQFISISNYLVIEANHEPEKLAAGPYPR 182 Query: 217 HF---------SLSE---SLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H LS + +E +P ++ L H+ + ++ + K T Sbjct: 183 HLKERISGPNGHLSNEACAKALVENASPALRHVWLCHLSDENNHPELAKKT 233 >gi|50085584|ref|YP_047094.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter sp. ADP1] gi|61214994|sp|Q6F9J2|PQQB_ACIAD RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|49531560|emb|CAG69272.1| coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) [Acinetobacter sp. ADP1] Length = 304 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 102/312 (32%), Gaps = 64/312 (20%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G P+ + C T RT+SS+ IS + ++ + PD Sbjct: 5 ILGSAAGGGFPQWNCNCENCLGLKQGTIQAKARTQSSIAISDNGKDW----ILCNASPDI 60 Query: 65 YMQVLRE----------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 Q+ + SI +++ T DH G+ LR Q V+A P+ Sbjct: 61 AQQIAHNPELQAPSSIRRGTSIGSIILTDSQIDHTTGLLNLREGCPHQ-----VWATPEV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L F F L + + I+ +PIL S Sbjct: 116 HEDLSTGFP-IFNMLKH--WNGGLVHHPIDIQTSFQVAVCEAIRFTPVPILSNAPPYSPY 172 Query: 175 GFR---FGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 R N+A Y + L +Q D L++D Sbjct: 173 RHRPLPGHNIALWIEDTRTGHSLFYAPGLGQMDDSILSYMQRADCLLVDGTLWKDQELAL 232 Query: 210 -----KNGLHSSHFSLSESLKKIELIN--PK-NAILTHMHVD---LDYDMVLKST--PSR 256 G H +L E I L++ PK +L H++ L+ D V ++T Sbjct: 233 LGVGKNTGQDMGHLALQEERGLIHLLSQFPKQRKVLIHINNTNPILNEDSVERATLKQLE 292 Query: 257 VVPAFDGMQFSS 268 + ++DGM Sbjct: 293 IEVSYDGMLIEV 304 >gi|302872047|ref|YP_003840683.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574906|gb|ADL42697.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 240 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 27/218 (12%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G ++L I ++ +H HADH + LR Y + + ID+Y + Sbjct: 30 NILIECGSGVLTRLLNFISFDDISFIICSHLHADHTSDLGVLRYYLASRGKEIDLYIPSE 89 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + Y I N + IE ++ I ++ + RI Sbjct: 90 PKEE------YNLIRKGVYRVKEIENNMEIEIGNLSIKFLEGQHPYKSFAV-----RIEE 138 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSSHFSLSESLK 225 G FG + D F E +E + D L+++A H S ++ + Sbjct: 139 NGKVFG---FSGDT-GFKEELIEFFKEADLLLLNAAYTDKEVEKIEPEKRFHLSPKQAAE 194 Query: 226 KIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPA 260 + N K +LTH+ + ++ M K +V Sbjct: 195 IAKKANAKLLVLTHLKPECNEKEHLMSAKEVFENIVLG 232 >gi|197303214|ref|ZP_03168256.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] gi|197297754|gb|EDY32312.1| hypothetical protein RUMLAC_01938 [Ruminococcus lactaris ATCC 29176] Length = 265 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VDTG + L + ++ +L TH H+DHI G+ +K I Sbjct: 20 DNTHLLVDTGISKKRIEEGLKTLDLKGNDLNGILITHEHSDHIQGLG-----VFSRKYQI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA ++ + + + Y PI + D P + G I+ P Sbjct: 75 PIYATKGTLEGIKSYSG--LGKMPEGLYHPI-------HTDEPFTL----GDIDIHPFEI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H G+R +VA TD+ + + +++ LQNLD ++++A H H Sbjct: 122 SHDANEPAGYRLECGAKSVAVATDLGKYDSYTVKNLQNLDAVLLEA----NHDIHM 173 >gi|195120882|ref|XP_002004950.1| GI20207 [Drosophila mojavensis] gi|193910018|gb|EDW08885.1| GI20207 [Drosophila mojavensis] Length = 760 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 99/312 (31%), Gaps = 85/312 (27%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K Y LG G+ C P +N SS+ I +E ++ D G Sbjct: 456 KSYPRIIFLGTGS-------------CIPNKTRNV---SSILIQTAAE----AFMLFDCG 495 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHG---------------------- 91 + Q++R E +L + AV +H HADH G Sbjct: 496 EGTHGQIVRLFGRERAREVMLQLQAVYVSHLHADHHIGLIALLRERQRLEPTSPLLLLAP 555 Query: 92 --IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 I+ ++ +Q PI A + + + I V Sbjct: 556 RQIEPWLNFYNRQIEPI---ADAYTL----MGNGELLEQPLAGERVEQLGIASIATCLVR 608 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA 208 C + G + + QH + Y D P L +L +N LI +A Sbjct: 609 HCPHAFGISLT---LQAQHEGEPI------KLTYSGDT--MPCADLVELGRNSTVLIHEA 657 Query: 209 LKNG------LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RV 257 +H ++S+++++ + K+ ILTH Y PS V Sbjct: 658 TMEDDLEEEARIKTHSTISQAIQQGRDMQAKHTILTHFSQR--YAK-CPRLPSTEDMQHV 714 Query: 258 VPAFDGMQFSSP 269 AFD MQ + Sbjct: 715 AIAFDNMQVAVE 726 >gi|170723981|ref|YP_001751669.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas putida W619] gi|226704959|sp|B1JDZ7|PQQB_PSEPW RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|169761984|gb|ACA75300.1| coenzyme PQQ biosynthesis protein B [Pseudomonas putida W619] Length = 303 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 91/320 (28%), Gaps = 73/320 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C + RT+SS+ +S ++ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCANCKGYRDGSLRATARTQSSIALSDDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + +IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNLIELEGSFVIPACPNLRFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLLVEDIRTGGKLFYAPGLGQVDDKLLAMMHGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 + G H + E L + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNP--ILDEDSPE 283 Query: 256 -------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 284 RAEVQRRGVEVAFDGMSIEL 303 >gi|312877271|ref|ZP_07737239.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795985|gb|EFR12346.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 240 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 35/235 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R ++++ G ++L I ++ +H HADH + LR Y + + ID+ Sbjct: 25 RTKEANILLECGSGVLTRLLNFISFDEISFIICSHLHADHYSDLGVLRYYLASRGKEIDL 84 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + K D + IENN M++ G + + QH Sbjct: 85 YIPSE------------PKEEYDLIRKGVYRVKEIENN-----METRIGNLTIKFLEGQH 127 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSS 216 S R + D F E +E ++ D +++++ Sbjct: 128 -PYKSFAVRIEEDGKVFGFSGDT-GFKEELIEFFKDADVILLNSAYTDKEVEKIEPEKRF 185 Query: 217 HFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H S ++ + + N K +LTH+ + ++ M K VV A D Sbjct: 186 HMSPKQAAEIAKKANAKLLVLTHLKPECNEKEHLMSAKEVFENVVLATDNETIEF 240 >gi|302534686|ref|ZP_07287028.1| beta-lactamase domain-containing protein [Streptomyces sp. C] gi|302443581|gb|EFL15397.1| beta-lactamase domain-containing protein [Streptomyces sp. C] Length = 250 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 81/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPAADSAC--------------SSYLVEADGFR-----LLLDMGNGS 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 + R + +DA+ +H HADH ID + + R I VY + Sbjct: 40 LGALQRHCGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHEGGRCGTIPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ D+R+ + + +++ I G H + S G Sbjct: 98 RLTTAYE---DVPDERSMSEVFDFRTLKSAVFEI------GPFTVRTEKVCH-PVESYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + +AY D P + + D + +A K + H + E+ + Sbjct: 148 RVEHGGRVLAYSGDTGVCPELGM-LAEGADLFLCEASFTHGKEDIPDLHLNGREAGEYAR 206 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 207 DGRVGRLVLTHI 218 >gi|297170680|gb|ADI21704.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured Verrucomicrobiales bacterium HF0130_14P10] Length = 259 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 77/232 (33%), Gaps = 61/232 (26%) Query: 50 RGSNTTVIVDTGPDFYMQ---VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + T++VD G + E + +DAV TH HADH GI GL +K Sbjct: 20 RTEDATILVDAGLSAKKLTGLLADEGLDTGELDAVFLTHEHADHSAGIRGLS-----KKA 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++A D + N + E + + P Sbjct: 75 SLPIFANQDTANAVQA------------QLARRPNWQIFETGHT-FNFRG----LRVQPF 117 Query: 165 LQQHGRISSLGFRF-----------GNVAYCTDVNAFPAESLEKLQNLDFLII------- 206 H +GF F ++A+ TD+ P EK+ L+I Sbjct: 118 SVPHDAYDPVGFYFEWGGEDLFNPLESLAWVTDLGYAPELVKEKIAQASILVIEANHCPR 177 Query: 207 ----DALKN--------GLHSSHFSLSESLKKIELI-NP--KNAILTHMHVD 243 DA + G H H S +L+ ++ I P K L H+ D Sbjct: 178 MLERDAKRPWSLKQRILGRHG-HLSNGATLELLKSIEKPRWKKIFLMHLSKD 228 >gi|262403964|ref|ZP_06080519.1| coenzyme PQQ synthesis protein B [Vibrio sp. RC586] gi|262348996|gb|EEY98134.1| coenzyme PQQ synthesis protein B [Vibrio sp. RC586] Length = 323 Score = 73.6 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 98/338 (28%), Gaps = 89/338 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 ILG GA G P+ C P RT+SS+ +S + VI++ Sbjct: 1 MQVIILGSGAGGGFPQWNCQCSQCAAMRYGDFPSTPRTQSSIAVSDDGKHW----VIINA 56 Query: 61 GPDFYMQV---------------------------------LREQVLSIDAVLYTHPHAD 87 PD Q+ LR+ I AV+ T D Sbjct: 57 SPDIRQQINQTPAFYSPVENTPKENTPADKSEPTFFSALSTLRQ--TRIRAVILTDAQID 114 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY--CFKALDDRTY----------- 134 H G+ L++ P+ +Y L E F F+ + Sbjct: 115 HTTGL-----LTLREGLPLPLYCTEAVKMSLTEEFPLLPIFEHWNGGYQCHTISNEWRID 169 Query: 135 -PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE 193 P + I I + + H G G + Y + A +E Sbjct: 170 ALPTLRFIPIPIRSNAPPYSRFRHQPRPMETIALHIIDEKTG---GQLLYAPGMEAANSE 226 Query: 194 SLEKLQNLDFLIID---------------ALKNGLHSSHFSLSESLKKIELINP---KNA 235 + +D +ID L+ G H L+ + + P Sbjct: 227 IERVMHKVDCALIDGTLWDDDEMIHLGLGTLR-GRDMGHLHLNGHAGTMAWLKPFTKPRK 285 Query: 236 ILTHMHVD---LDYDMVLKST--PSRVVPAFDGMQFSS 268 IL H++ L+ ++ + + FDGM + Sbjct: 286 ILVHINNTNPILNQHSAERALLEQAGIEVGFDGMTLNL 323 >gi|310644833|ref|YP_003949592.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309249784|gb|ADO59351.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 268 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 80/233 (34%), Gaps = 49/233 (21%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ +D +L TH H+DH+ G+ + +K Sbjct: 20 RNEDTTLLIDAGLSAKRIDELLKERDLSGEELDGILVTHEHSDHVKGLGAMA-----RKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA F + N ++E + Sbjct: 75 NLPIYANEKTW----------FAISNAVGQIADDNRRILETGATR-----EFESLRVESF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ F ++ TD+ + + + + D L+++A L+ G + Sbjct: 120 GISHDAAEPVGYSFYDGAEKLSVATDLGYVSDKVKQAISDADVLVLEANHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + K L H+ D + + K T Sbjct: 180 PWNIKRRILSDIGHLSNEMAGAILSELLTGRTKRTYLAHLSRDHNMMELAKMT 232 >gi|78048801|ref|YP_364976.1| pyrroloquinoline quinone biosynthesis protein PqqB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123584446|sp|Q3BQI7|PQQB_XANC5 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|78037231|emb|CAJ24976.1| coenzyme PQQ synthesis protein B [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 299 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 104/317 (32%), Gaps = 71/317 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT----NPKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ A + RRT++S+ +S ER V+++ Sbjct: 1 MRIIVLGSAAGGGHPQWNCHTLASLRAWQQTDGAQRRTQASIAVSADGERW----VLINA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PDF Q+L + + I+AVL T DHI G+ +R + + ++A+ Sbjct: 57 SPDFRQQILATPALWPQHGLRHSPIEAVLLTSGEIDHIAGLLSMR-----ESQRFSLHAS 111 Query: 112 PDCMKHLFES--FR-----YCFKALDDRTYPPI-----VNPIVIENNDVPICMKSAGGVI 159 + L ++ F Y + P + + P + +GG + Sbjct: 112 SRVLGLLAQNPIFDAVNPQYVSRQPFALDTPLVLCGLQLTPFSVPGKVPLFMESRSGGDL 171 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 +LG + + Y A +LQ+ + + D Sbjct: 172 AG-------SDEETLGLTIDDGRRRMHYIPGCAAMTDALRARLQSAELVFFDGTLWRDDE 224 Query: 210 --------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 K G H S+ ++ +N I H++ ++ +P Sbjct: 225 MVQLGVSQKTGQRMGHMSIDGPDGTIAAFAPLNVARKIFIHLNTTNP--VLDTLSPEFAS 282 Query: 256 ----RVVPAFDGMQFSS 268 A DG++ + Sbjct: 283 ARASGWEVAHDGLEIAL 299 >gi|319784231|ref|YP_004143707.1| hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170119|gb|ADV13657.1| putative hydrolase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 98/303 (32%), Gaps = 67/303 (22%) Query: 6 HFTILGCGASLGVP--RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG S G P R G W SS + +++VD G Sbjct: 9 RLVLLG---SKGGPALRPGGPWP-------------SSSLLQI-----GGRSIVVDCGLG 47 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF 119 ++ + S+D + TH H+DH+ + L + P+ V+ P H + Sbjct: 48 VTRGLVDAGISLKSLDLIFITHLHSDHVLELGPLIHTAWTAGLATPVGVFGPPGT-GHYW 106 Query: 120 ESFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-S 173 F + + D P I + + I + A G + + +H ++ Sbjct: 107 RRFCQAMEFDIEIRIVDEGRPDIRDLVSI--GEFGEGQVVAQGGLTVSALRVEHPPVTDC 164 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LKN 211 RF +V + D FP + + + D L+ +A L+ Sbjct: 165 FALRFEHGGKSVVFSGDTAFFPPLA-DFARGADILVHEAMVEEGIERLVARTGNGARLRE 223 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLD--------YDMVLKSTPSRVVPAFDG 263 L +SH E+ K +L H+ D V K+ + A DG Sbjct: 224 HLLASHSFAEEAGSIASDAGVKRLVLNHLIPADDSLIGEADWTAAVRKTWNGDLTIARDG 283 Query: 264 MQF 266 + Sbjct: 284 LVV 286 >gi|300718347|ref|YP_003743150.1| Pyrroloquinoline quinone biosynthesis protein B [Erwinia billingiae Eb661] gi|299064183|emb|CAX61303.1| Pyrroloquinoline quinone biosynthesis protein B [Erwinia billingiae Eb661] Length = 303 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 98/317 (30%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + RT+SS+ +S V+ + Sbjct: 1 MQINVLGSAAGGGFPQWNCNCSNCQGVRNGTLKTSARTQSSIALS----DDGINFVLCNA 56 Query: 61 GPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ +I +++ T DH G+ LR Q V+ Sbjct: 57 SPDIAHQLAATPALSKKEVLRGTAIGSIILTDSQIDHTAGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P+ L F F L + + I + AIP+L Sbjct: 112 PEVHDDLTTGFP-VFTMLTH--WNGGLIHHGITPGEAFSVAVCPALTFTAIPLLSNAPPY 168 Query: 172 SSLGFRFG-----NVA-YCTDVN-----------AFPAESLE-KLQNLDFLIIDAL---- 209 S+ +R N+A + D P L L D L+ID Sbjct: 169 SA--YRGKPLPGHNIALFIEDTRTGKTLMYAPGLGEPDSELLGWLHKADCLLIDGTLWQD 226 Query: 210 ----------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVD---LDYDMVLKS- 252 G H +L+E + + + + IL H++ LD + + Sbjct: 227 NELANTGVGRNTGKDMGHLALAEEQGLIALLASLPAERKILIHINNTNPILDEESAERQM 286 Query: 253 -TPSRVVPAFDGMQFSS 268 T + ++DGM Sbjct: 287 LTSLGIEVSWDGMVIEV 303 >gi|312113025|ref|YP_004010621.1| beta-lactamase-like protein [Rhodomicrobium vannielii ATCC 17100] gi|311218154|gb|ADP69522.1| beta-lactamase-like protein [Rhodomicrobium vannielii ATCC 17100] Length = 247 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 100/285 (35%), Gaps = 59/285 (20%) Query: 5 YHFTILGCGA---SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 T++GCG S G R S + + +++D G Sbjct: 1 MELTVIGCGDAFASGG-------------------RINSCYLLDTA-----HGRLMIDCG 36 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMK 116 ++ R + S DA+L +H H DH G+ L R + + +P+++ P Sbjct: 37 ATAPHELARAGIRASSADAILISHCHGDHFGGLPSLVLERMFIDRTDKPMEILGPP---- 92 Query: 117 HLFESFRYCFKALDDRTYPPIVNP-----IVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + F ++L + YP I+ I+ + ++ G +IEA + G Sbjct: 93 GIESRF----ESLMENVYPGILGVKKPFEILFRDLHPGFAIEWRGLMIEAFEVDHFSGS- 147 Query: 172 SSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLHSSHFSLSESLKK 226 SL + ++ D + F + + D +++ H L+ Sbjct: 148 PSLALSVSDGDKQFSFSGD-SGFCGGVIAAGRGADLYLVECSTYSTKVEMHLDY---LRL 203 Query: 227 IEL---INPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 I K +LTHM ++ + T + A DG++ + Sbjct: 204 SAKFPSIGAKRYLLTHMGDEMLASLDRIDTRVCIA-AVDGLKVTI 247 >gi|293567562|ref|ZP_06678906.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291589663|gb|EFF21467.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] Length = 246 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 23/213 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G D +++ L +DAV+ +H H DHI + L+ Y+ + Sbjct: 25 QSDGFNLLIDAGSDTLIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR--- 81 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ + ++ D + + V + + + G + H Sbjct: 82 --NPETLLSIYG------HTKDSIHFEELTLENVSKGHPYFEAEELKIGPFLITFMETIH 133 Query: 169 GRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFS 219 + R + D + + + ++ D + D N H +HF+ Sbjct: 134 -PVVCYAMRIVEETTGKVFVFTGD-SGYLESFADFAKDADLFLADTYLFEGNEHHHAHFT 191 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 E+ + + N K +LTH+ D + + Sbjct: 192 SKEAGELAKSANVKKLVLTHLPQFGDLEQLKNE 224 >gi|218247065|ref|YP_002372436.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801] gi|257060134|ref|YP_003138022.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] gi|218167543|gb|ACK66280.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801] gi|256590300|gb|ACV01187.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] Length = 285 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 90/261 (34%), Gaps = 46/261 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + +I D G +L E ++ + +TH H DHI G F+ Sbjct: 34 SCVEMQVGKERLIFDGGTGLRVLGESMLSESPVTAH-LFFTHSHWDHIQGFPFFSPAFVP 92 Query: 102 QKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + + D +P P+ I D+ AG ++ Sbjct: 93 NNTFY-IYGLPAPNGATIQQRLH------DQMLHPNFPVPLQIMQGDLQFYNLEAGEIVN 145 Query: 161 AIPILQQHGRI----SSLGFR--FG--NVAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 + + GR+ +LG+R FG + Y TD FP L+ + D LIIDA Sbjct: 146 IGEVTVETGRLNHPGEALGYRVSFGGRSAVYVTDTEHFPDRLDENVLKLARQADVLIIDA 205 Query: 209 L-----KNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMV 249 SS H + E +K + + K +L H D + Sbjct: 206 TYTDEEYYNPESSKVGWGHSTWQEGVKIAQAADVKQLVL--FHHDPSHNDTYLDQIKQEA 263 Query: 250 LKSTPSRVVPAFDGMQFSSPI 270 + P + A +G+ PI Sbjct: 264 IAVFP-NTLLAREGLMIKVPI 283 >gi|315640894|ref|ZP_07895990.1| ribonuclease Z [Enterococcus italicus DSM 15952] gi|315483312|gb|EFU73812.1| ribonuclease Z [Enterococcus italicus DSM 15952] Length = 307 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 92/290 (31%), Gaps = 72/290 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MEIEFLGTGA--GVPA--------------KHRNVTSIALKLLDER--NKIWLFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 MQ+LR + I+ + TH H DHI G+ GL Q +D+Y + + Sbjct: 43 QMQILRTTIKPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGNESLDIYGPKGVEEFVRT 102 Query: 120 ----------------------------------------ESFRYCFKALDDRTYPPIVN 139 +SF Y D + Sbjct: 103 SLRISRSRLGYKLNFYEVTDGIVFEDHQFTVFAKKLDHGIDSFGYRVVEKDHVGELQVDK 162 Query: 140 PIVIENNDVPICMKSAGGVIEAIP-ILQQHGRISSLGFRFGNVA-YCTDVNAFPAESLEK 197 + + + PI + G +P G+ R G + D + +S+E Sbjct: 163 LVAMSVSPGPIFGQLKRGERVTLPDGRVLDGKDFLGQARKGRIVTILGDT-RYCQQSIEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 ++ D L+ ++ N +S H + ++ + + + LTH+ Sbjct: 222 AKDADVLVHESTFNKHEASMAKDYFHSTTHQAAEVAKKAGVQKLALTHIS 271 >gi|229163080|ref|ZP_04291036.1| Ribonuclease Z [Bacillus cereus R309803] gi|228620486|gb|EEK77356.1| Ribonuclease Z [Bacillus cereus R309803] Length = 307 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 91/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L + I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSIRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEIEEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + + I Q+ I+ LG + YC Sbjct: 163 KLLELGVKPGPIFKRLKDGEVVELENGTMLNGKDFIGPPQKGKIITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAHDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|148545659|ref|YP_001265761.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas putida F1] gi|166989874|sp|A5VXG7|PQQB_PSEP1 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|148509717|gb|ABQ76577.1| coenzyme PQQ biosynthesis protein B [Pseudomonas putida F1] gi|298682247|gb|ADI95311.1| PqqB [Pseudomonas putida] Length = 303 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 90/318 (28%), Gaps = 69/318 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S ++ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHV-----DLDYDMVL 250 + G H + E L + +L H++ D D Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNPILDEDSPERA 285 Query: 251 KSTPSRVVPAFDGMQFSS 268 + V AFDGM + Sbjct: 286 EVLRRGVEVAFDGMSIAL 303 >gi|227500612|ref|ZP_03930661.1| possible beta-lactamase [Anaerococcus tetradius ATCC 35098] gi|227217199|gb|EEI82543.1| possible beta-lactamase [Anaerococcus tetradius ATCC 35098] Length = 263 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 73/242 (30%), Gaps = 53/242 (21%) Query: 53 NTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Q + E +D + TH H DHI G L ++ I Sbjct: 22 GCRILIDAGFSGKKIENLLGQ-IGENPKDLDGIFITHEHNDHIQG-----AGVLSRRFDI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA K L + + + I+ + I +P+ Sbjct: 76 PIYANQGTWKGLTQKIK-------------KLKEENIKVFKTNEFINFKSMDI--LPVAI 120 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS- 215 H + + + + +D + +++ D ++ ALK G + Sbjct: 121 HHDAMEPVAYVIYIGNKKLTILSDTGIVDEKIAYEIKGSDIYYMEANHDLQALKMGPYPH 180 Query: 216 ----------SHFSLSESLKKIELINPKN---AILTHMHVDLDYDMVLKSTPSRV--VPA 260 H S ++ + + L+H+ + + + T Sbjct: 181 NLKLRVMGNMGHLSNDQAAEALADALVGKNETVFLSHLSETNNTPELSRLTVDNYLRSLG 240 Query: 261 FD 262 +D Sbjct: 241 YD 242 >gi|291522323|emb|CBK80616.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Coprococcus catus GD/7] Length = 264 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 47/228 (20%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G Q L+ + IDA+L TH H DHI GI +K + Sbjct: 20 DDTHILIDAGISKKRIEQGLKSFGTEGTDIDALLVTHEHMDHIQGIG-----VWSRKYHV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y ++ ++ + +D+ + VI + + P Sbjct: 75 PIYGTRGTLEEIWRTKS--LGKVDESLF------HVIRPGE-----TFQINDMTIHPFSI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + ++ + TD+ F +++L++ D L ++A L+ G + Sbjct: 122 PHDARDPVSYQIETADARIGTVTDLGYFDEAIIDELKDCDLLYVEANYDLHMLEVGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 H S + + + + IL H+ + ++ + Sbjct: 182 QLKRRIAGNYGHLCNEMSGQLVGRLLNERLQQVILGHLSKENNFPELA 229 >gi|302346530|ref|YP_003814828.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] gi|302150482|gb|ADK96743.1| metallo-beta-lactamase domain protein [Prevotella melaninogenica ATCC 25845] Length = 268 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + VL TH HADH+ + + G + Sbjct: 21 DTDCLMIDCGVGIRSLKKHFHNYGLQLNMVHNVLITHDHADHVKSVGSISG-----DLQL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + + ++ +C + D+ Y V + G + P Sbjct: 76 PVYTTKDVHRGISQN--WCVRRKVDQQYVKFVQ----------KGEEITIGEFKVTPFGV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ TD E + + ++L+I+A L G + Sbjct: 124 PHDSTDCVGYSVEYEGIRFTLITDCGHITDEIAQFISISNYLVIEANHEPEKLAAGPYPR 183 Query: 217 HF---------SLSE---SLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H LS + +E +P ++ L H+ + ++ + K T Sbjct: 184 HLKERISGPNGHLSNEACAKALVENASPALRHVWLCHLSDENNHPELAKKT 234 >gi|158338639|ref|YP_001519816.1| ribonuclease Z [Acaryochloris marina MBIC11017] gi|189043778|sp|B0CE23|RNZ_ACAM1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|158308880|gb|ABW30497.1| ribonuclease Z [Acaryochloris marina MBIC11017] Length = 314 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEI--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR ++ + + TH H DHI G+ GL ID+Y ++L Sbjct: 42 QHQLLRSELKSSQLRRIFITHMHGDHIFGLMGLLASCGLAGNTERIDIYGPAGLEEYLQA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 RY + +YP + ++ +V + P+ R+ + G+R Sbjct: 102 CRRY---SQTHFSYP--IQVHTVQPGEV---FSDQDYSVVCAPLKH---RVPAFGYRIQ 149 >gi|218899304|ref|YP_002447715.1| ribonuclease Z [Bacillus cereus G9842] gi|228902652|ref|ZP_04066803.1| Ribonuclease Z [Bacillus thuringiensis IBL 4222] gi|228941303|ref|ZP_04103856.1| Ribonuclease Z [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967182|ref|ZP_04128218.1| Ribonuclease Z [Bacillus thuringiensis serovar sotto str. T04001] gi|228974235|ref|ZP_04134805.1| Ribonuclease Z [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980826|ref|ZP_04141131.1| Ribonuclease Z [Bacillus thuringiensis Bt407] gi|254808608|sp|B7IWQ5|RNZ_BACC2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218543591|gb|ACK95985.1| ribonuclease Z [Bacillus cereus G9842] gi|228778995|gb|EEM27257.1| Ribonuclease Z [Bacillus thuringiensis Bt407] gi|228785575|gb|EEM33584.1| Ribonuclease Z [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792551|gb|EEM40117.1| Ribonuclease Z [Bacillus thuringiensis serovar sotto str. T04001] gi|228818462|gb|EEM64534.1| Ribonuclease Z [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228857093|gb|EEN01602.1| Ribonuclease Z [Bacillus thuringiensis IBL 4222] gi|326941921|gb|AEA17817.1| ribonuclease Z [Bacillus thuringiensis serovar chinensis CT-43] Length = 307 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAHDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|319646703|ref|ZP_08000932.1| hypothetical protein HMPREF1012_01969 [Bacillus sp. BT1B_CT2] gi|317391291|gb|EFV72089.1| hypothetical protein HMPREF1012_01969 [Bacillus sp. BT1B_CT2] Length = 245 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 87/266 (32%), Gaps = 48/266 (18%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV-LREQVLSI 76 V I G N +S + + + +V++D G ++ L V + Sbjct: 3 VTVIGC-CGGFPAANEA-----TSGYLFQSGD----YSVLIDCGSAVLSKLQLFLPVEEL 52 Query: 77 DAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 DAV+ +H H DHI + L+ + K + +Y P + F L Sbjct: 53 DAVILSHYHHDHIADVGPLQFAKLVGSFLGKGADALPIYGHPFDEEQ--------FSKLT 104 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD 186 +T+ + A G + H + R + V Y D Sbjct: 105 YKTHTAGLA--------YDPTQPLAIGPFTFTFLKTVH-PVDCFAMRVTDGVHSVVYTAD 155 Query: 187 VNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINP-KNAILTHMH 241 ++F + + D LI + ++G + H + E + +LTH+ Sbjct: 156 -SSFQEAFIPFSEGADLLISECNFYADQDGRSAGHMNSLEVGRIAAEAGATGQLLLTHLP 214 Query: 242 VDLDYDMVLKS----TPSRVVPAFDG 263 ++ +++ VV A G Sbjct: 215 HFGEHQKLIEEAQTVYKGAVVLAHTG 240 >gi|167768076|ref|ZP_02440129.1| hypothetical protein CLOSS21_02621 [Clostridium sp. SS2/1] gi|317499367|ref|ZP_07957635.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167710405|gb|EDS20984.1| hypothetical protein CLOSS21_02621 [Clostridium sp. SS2/1] gi|316893336|gb|EFV15550.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 260 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 48/231 (20%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T V+VD G + + L V D +L TH H DHI G+ + ++ + Sbjct: 21 KTNVLVDCGVSAKRIENSLSELDLTVPEFDGILITHEHTDHIKGLG-----VIARRYGLP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++A + + F Y V+ + + + + G ++ Sbjct: 76 IFATGKTIDAI---FDY--------KNLGKVDKSLFHSIEADKPFE--IGDMKVNASHIW 122 Query: 168 HGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + F + TD+ + +EK+ + D L ++A L+ G + Sbjct: 123 HDAADPVCYSFYSEEGAKASIATDLGDYDEYLVEKIYDSDILFVEANHDVNMLQVGRYPY 182 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + IE + K L H+ + +Y+ + T Sbjct: 183 YLKRRILGREGHLSNERCAELIEEVATQKTKKVYLGHLSKENNYEKLAYET 233 >gi|302560433|ref|ZP_07312775.1| metallo-beta-lactamase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302478051|gb|EFL41144.1| metallo-beta-lactamase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 250 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R PI VY Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCGYFVARYYRHDGGRCEPIPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ + G H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPS------TFEIGPFLVHTERVAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D + ++ D + +A K + H + E+ + Sbjct: 148 RIEHGGKTLTYSGDT-GVTPALDDLARDADLFLCEAAFTHGKEDIPDLHLNGREAGETAA 206 Query: 229 LINPKNAILTHM 240 + ILTH+ Sbjct: 207 RAGVRRLILTHI 218 >gi|48478345|ref|YP_024051.1| ribonuclease Z [Picrophilus torridus DSM 9790] gi|56749432|sp|Q6KZJ4|RNZ_PICTO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|48430993|gb|AAT43858.1| metallo-beta-lactamase [Picrophilus torridus DSM 9790] Length = 309 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 91/292 (31%), Gaps = 78/292 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + T LG G S VP+ R ++ + N + D Sbjct: 1 MASTFKITFLGTGGS--VPKPG--------------RGLPAIAVQV-----DNIVNLFDC 39 Query: 61 GPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G Q ++ V ++ + +H H DH G+ GL F R ++++ P + Sbjct: 40 GEGTQKQFMKSGVSFMNVKNIFISHFHGDHFFGLPGLLSTFSFNGRIDDLNIFGPPGTID 99 Query: 117 HLF--------------------ESFRYCFKALD-----------DRTYPPIVNPIVIEN 145 + E+ +Y F D +Y ++ N Sbjct: 100 EIKKVLSLIDFKITYNIKIAEMEENKKYDFDLFDVYAIKNDHTKYGYSYKLKEKDLIKIN 159 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------NVAYCTDVNAFPAE 193 + + +E +L+ +G +G R+ ++ Y D F Sbjct: 160 REKADSIGFPKNKLE---LLRNNGEYYYMGKRYSIWDVADGIKPGRSIVYSGDTRPFND- 215 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 L+ N D LI D+ + + H + ++ + N K L H Sbjct: 216 MLKFASNCDVLIHDSTMDASIENLANEYGHSTARQAAEIALKANVKRLFLFH 267 >gi|312897898|ref|ZP_07757312.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] gi|310620993|gb|EFQ04539.1| metallo-beta-lactamase domain protein [Megasphaera micronuciformis F0359] Length = 306 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 81/253 (32%), Gaps = 60/253 (23%) Query: 38 TRSSLKISRVSERG-------SNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPH 85 RSS+ + G +T +++D G + L + IDA+ TH H Sbjct: 41 CRSSVTVLASGSGGNATLVCCGSTKILIDAGISYRRITNALSARGYSPADIDALFLTHEH 100 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 DH+ G+ LK + VY + + L ++ Sbjct: 101 TDHVQGL----PILLKN-TDMPVYTTEETWRALGKT------------------ATSAPG 137 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNL 201 VP+ + G I +P H +G+ + Y TD+ + Sbjct: 138 RFVPLTKRVGVGDIYVVPFEIPHDAARPVGYAVYDGQTKITYATDLGYVTPSVRGAASHA 197 Query: 202 DFLIIDA------LKNGLHS-----------SHFSLSESLKKIELINPKNAILTHMHVDL 244 D L+++A ++ G + H S + + + K M V L Sbjct: 198 DILVLEANHDEDMVRQGPYPYRLQQRILGSYGHLSNDAAADLLTQLPQKKM----MKVLL 253 Query: 245 DYDMVLKSTPSRV 257 + + P++V Sbjct: 254 AHRSDKNNEPAKV 266 >gi|294868284|ref|XP_002765461.1| Ribonuclease Z, putative [Perkinsus marinus ATCC 50983] gi|239865504|gb|EEQ98178.1| Ribonuclease Z, putative [Perkinsus marinus ATCC 50983] Length = 356 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 95/317 (29%), Gaps = 98/317 (30%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG--------- 51 M + LG S GVP+ +R SSL I+ + R Sbjct: 1 MSFFDQVVFLGT--SSGVPQPG-------------KRNVSSLAITLRTGRSVRIDANTVP 45 Query: 52 -----SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G Q++ ++ ID +L TH H DH +GI GL +R Sbjct: 46 RGILLPPFKILVDCGEATQHQLMLSKIKLTKIDDILITHLHGDHCYGIFGLLHSCCMGER 105 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 PI VY + F AL +N + ++ + G + Sbjct: 106 TEPITVYGPQGIKTMIETVF-----ALSGGWNGYDLNIVELDPTQHT-EFTISSGDVRIH 159 Query: 163 PILQQHGRISSLGFRF-----------------------------GNVAYCTDVNAF--- 190 +H R+ +LG+ F G +D Sbjct: 160 AAPLKH-RVPTLGYIFTEPDKPGALNASLAAQMGARGPQFRDLKEGRDVTLSDGTLIRAA 218 Query: 191 --------------------PAESLEKLQNLDFLI-----IDALKNGLHS-SHFSLSESL 224 +E+L LQ D LI DA++ H + + + Sbjct: 219 EVVGETAKGRTIAVLQDTCDSSEALPYLQGPDLLIHECTYHDAMREKAVDFGHSTAAMAG 278 Query: 225 KKIELINPKNAILTHMH 241 + L K LTH Sbjct: 279 QFARLCGAKVLALTHFS 295 >gi|228909974|ref|ZP_04073795.1| Ribonuclease Z [Bacillus thuringiensis IBL 200] gi|228849809|gb|EEM94642.1| Ribonuclease Z [Bacillus thuringiensis IBL 200] Length = 307 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFCVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAADEQQAHDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|114567949|ref|YP_755103.1| hypothetical protein Swol_2443 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338884|gb|ABI69732.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 285 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 52/231 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G +Q + + +DAVL TH H DHI G+D +K + Sbjct: 20 GESKILVDAGISCRRIENGLQAIGTRAGELDAVLLTHEHTDHIKGLD-----VFIRKYQL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A P + ++ + + + + + G + P Sbjct: 75 PVFARPATWSKIDCRKKFPGECIKE------------------LEGTFSLGKVLIEPFAI 116 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H I +GF F TD+ E + L D ++++ LKNG + Sbjct: 117 SHDAIDPVGFCFYYGKRKAVIATDLGMVSREVEKALSFSDIAVLESNHDPQMLKNGPYPP 176 Query: 217 -----------HF-SLSES--LKKIELINPKNAILTHMHVDLDYDMVLKST 253 H + + L + NP +L H+ ++ M+ + T Sbjct: 177 YLKKRIEGREGHLSNFDTARLLSTVPRHNPMQVLLAHISQQNNHPMLAQQT 227 >gi|206577171|ref|YP_002238375.1| coenzyme PQQ biosynthesis protein B [Klebsiella pneumoniae 342] gi|226704953|sp|B5XX61|PQQB_KLEP3 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|206566229|gb|ACI08005.1| coenzyme PQQ biosynthesis protein B [Klebsiella pneumoniae 342] Length = 308 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 95/314 (30%), Gaps = 69/314 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C + RT+SS+ +S + V+ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCQGLRNGTIQASARTQSSIIVSDNGKEW----VLCNASPDI 60 Query: 65 YMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + SI ++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQIAHTPELNKPGVLRGTSIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L F F L R + + I A+PI S Sbjct: 116 EDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSPYR 172 Query: 176 FR---FGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 R NVA Y + L LQ D L+ID Sbjct: 173 DRPLPGHNVALFIEYRRNGQTLFYAPGLGEPDEALLPWLQKADCLLIDGTVWQDDELQAA 232 Query: 210 ----KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPS------- 255 G H +LS+ + + + K IL H++ +L Sbjct: 233 GVGRNTGRDMGHLALSDEHGMMALLASLPAKRKILIHINNTNP---ILNELSPQRQALKQ 289 Query: 256 -RVVPAFDGMQFSS 268 + ++DGM + Sbjct: 290 QGIEVSWDGMAITL 303 >gi|152974651|ref|YP_001374168.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023403|gb|ABS21173.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 244 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 78/238 (32%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAVL +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYIAPSDIDAVLLSHYHHDHVADIGVLQYARLITNATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y ++ F +L + + E G Sbjct: 85 LPQLPIYGHGFDVQG--------FASLTHEPHTKGIVYHPEE--------TLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCYAMRIAAGDKVVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKS---TPSRVVPAFDGMQFSS 268 H + E+ + N K +LTH+ H+ D+V ++ + A G ++S Sbjct: 187 AGHMNSIEAANIAKHANVKKLVLTHLPHIGNPADLVEEAKQIFSGSIALAHSGYTWNS 244 >gi|170078992|ref|YP_001735630.1| beta-lactamase superfamily hydrolase [Synechococcus sp. PCC 7002] gi|169886661|gb|ACB00375.1| Metal-dependent hydrolases of the beta-lactamase superfamily I protein [Synechococcus sp. PCC 7002] Length = 303 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 74/224 (33%), Gaps = 27/224 (12%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V N +I D G ++ E + ++H H DHI G F Sbjct: 36 SCVEMCAGNQRLIFDGGTGLRLLGEALVAESAPIAAHLFFSHSHWDHIQGFPFFTPAFQP 95 Query: 102 QKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 Q ++Y D + + + P V + + + + G + Sbjct: 96 Q-NRFNIYGVTADDEIPIQKRLHDQMLHPN-FPVPLQVMRAELNFVALALGETVSLGEVR 153 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDAL--- 209 H ++G+R VAY TD + + L Q D LI+DA Sbjct: 154 VTNGPLNHPG-GAVGYRVDWQGLGVAYITDTEHYGDRLDDQVLRLAQGADVLIMDATYTD 212 Query: 210 ---KNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDY 246 + HS H + E++K + N K IL H D + Sbjct: 213 EEYHDPRHSKVSWGHSTWQEAVKVAQAANVKQLIL--FHHDPSH 254 >gi|188592273|ref|YP_001796871.1| coenzyme pyrroloquinoline quinone (pqq) synthesis protein b [Cupriavidus taiwanensis LMG 19424] gi|170938647|emb|CAP63634.1| coenzyme Pyrroloquinoline quinone (PQQ) synthesis protein B [Cupriavidus taiwanensis LMG 19424] Length = 309 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 101/319 (31%), Gaps = 71/319 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTG 61 +LG A G+P+ C N +T+SS+ +S R V+V+ Sbjct: 2 LRVIVLGAAAGGGLPQWNCACTTCRAAREGNLVVPQTQSSIAVSADGVRW----VVVNAS 57 Query: 62 PDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVY 109 PD Q Q L + +VL T+ DHI G+ LR + L Y Sbjct: 58 PDIRQQFAATQALQPVKGPRSSPLSSVLLTNADVDHIAGLLSLRESQAFTL--------Y 109 Query: 110 AAPDCMKHLF--ESFRYCFKALDDRT------YPPIVNPI--VIENNDVPICMKSAGGVI 159 A ++ L F + +R P+V+ P + + Sbjct: 110 ATGRVLRVLEGNAVFNVLARNHVERRALRLDEVQPVVDARGGDTSVRIEPFAIPGKIALW 169 Query: 160 EAIPILQQHGRIS--SLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 P G + ++G G + Y + P +L D L+ D Sbjct: 170 LENPEAFGLGGVPEDTIGLAIGAAGSSNRLFYLPSCSGLPDTIKARLSTRDSLLFDGTTF 229 Query: 212 GL---------HSS-----HFSLSESLKKIEL---INPKNAILTHMHVDLDYDMVLKSTP 254 H + H +S + + ++ + + H++ ++L +P Sbjct: 230 TEDEMISSGTGHKTASRMGHLPMSGAKGAVAQWEGVSLRRKVFIHINNTNP--VLLPDSP 287 Query: 255 S-------RVVPAFDGMQF 266 A DGM+F Sbjct: 288 ERAFIQKSGWEIAHDGMEF 306 >gi|167949360|ref|ZP_02536434.1| Beta-lactamase-like protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 257 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 76/240 (31%), Gaps = 57/240 (23%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 V++D G +Q L + SIDA++ TH H DH+ G+ L ++ Sbjct: 18 DSGGVRVLLDCGFPATEVERRLQRLGVEAGSIDAIIVTHEHGDHLRGVGPLA-----RRH 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+ + I+++ C + G + P Sbjct: 73 EIPVWMTEGTRSLAQARCG------------ELPEVHAIDSH----CSRFCIGDLSIEPF 116 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLH 214 H F F + TD E++ D L++ + L NG + Sbjct: 117 PIPHDAREPCQFVFQKGGLRLGVVTDAGCITPHIEERIAACDALVLEFNHDTEMLANGPY 176 Query: 215 SS-----------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 + H + +S + + ++ +L H+ +TP +V A Sbjct: 177 PASLQARVGGNLGHLNNEQSAALLRKLDCGRIRHLLLAHLS-------EKNNTPEQVTAA 229 >gi|328953236|ref|YP_004370570.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453560|gb|AEB09389.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 253 Score = 73.2 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 83/283 (29%), Gaps = 49/283 (17%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 I+G G GVP R R + + + V+ D G Sbjct: 2 RVEIVIIGSGT--GVP----------------YRRRGA---PAAAVKIRGCLVLFDLGAG 40 Query: 64 FYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF-- 119 +L ID + +H H DH+ L + + YA +H F Sbjct: 41 TLRSMLNYDLNFNDIDILCLSHHHPDHVG---DLIPFLFATR-----YALGYTRQHPFWV 92 Query: 120 ------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 +F + + P + + + + H +S Sbjct: 93 LAADGFMNFYGRLQNAFGQWLEPPPGLMQVREFSCDREDEFTLADLRIRTAPVNH-IATS 151 Query: 174 LGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL 229 L +R V Y D + + Q D LI++A H + E+ + Sbjct: 152 LAYRLEAGGKAVVYSGDTDW-SDSLINLAQGADVLILEAANPFKVPGHLTPVEAGRLAAQ 210 Query: 230 INPKNAILTHMHV---DLDYDMVLKSTPSR-VVPAFDGMQFSS 268 +LTH + ++D T + +V A DG+ Sbjct: 211 TGVPRLVLTHFYPPCDEMDVVAACAQTYAGEIVRAEDGLCLRV 253 >gi|239827626|ref|YP_002950250.1| ribonuclease Z [Geobacillus sp. WCH70] gi|259494136|sp|C5D428|RNZ_GEOSW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|239807919|gb|ACS24984.1| ribonuclease Z [Geobacillus sp. WCH70] Length = 308 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 95/290 (32%), Gaps = 72/290 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 1 MELLFLGTGA--GVP-----------AKERNV---SSIALQLLEERGA--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHL-- 118 Q+L + I+ + TH H DHI G+ GL G Q +Y + Sbjct: 43 QHQILHTSIRPRRIENIFITHLHGDHIFGLPGLLGSRSFQGGDTPLTIYGPKGIQAFIEI 102 Query: 119 -----FESFRYCFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 + +Y + ++ + ++ + + S G + + +P + Sbjct: 103 SLSVSYTRLKYDLQVVEIEEGTIFEDERFLVIAKQLDHGIPSYGFRVVEKDLPGTLLVDK 162 Query: 171 ISSLGFRFGNVAYCT------------------DVNAFP---------------AESLEK 197 + LG R G + Y D P S+E Sbjct: 163 LKVLGIRPGPI-YQQIKLGKTVQLDNGTVIDGRDFVGPPQKGRIVTILGDTRYCEASVEL 221 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 + D L+ +A S+ H + ++ + +L K ILTH+ Sbjct: 222 AKEADVLVHEATFAAEDSALAHDYFHSTAVQAAEVAKLAGVKRLILTHIS 271 >gi|325570711|ref|ZP_08146437.1| metallo-beta-lactamase [Enterococcus casseliflavus ATCC 12755] gi|325156557|gb|EGC68737.1| metallo-beta-lactamase [Enterococcus casseliflavus ATCC 12755] Length = 246 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 79/247 (31%), Gaps = 52/247 (21%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHA 86 C P N + + +++D G +Q+ + L +DAV+ TH H Sbjct: 8 CLGAYPYNGEGTTGYLVE-----SDGFHLLLDAGSTTLVQLEKILDPLDLDAVILTHYHH 62 Query: 87 DHIHGIDGLRGYFLKQ-------KRPIDVYAAPD--------CMKHLFESFRYCFKALDD 131 DHI + L+ + Q ++ + +Y + M + + F Y Sbjct: 63 DHIADLGVLQ--YYWQLYPENEERQVLPIYGHGEDRVHFESLTMPGVTQGFDY------- 113 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEA---IPILQQHGRISSLGFRFGNVAYCTDVN 188 + +E I + + + G++ G+ Y Sbjct: 114 ------LQSESLELGPFTITFMKTIHPVTCYAMRFVEKSTGKVFVF---TGDSGYL---- 160 Query: 189 AFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + + D + D N H +HF+ E+ + K +LTH+ D Sbjct: 161 ---ESFVPFAEGADLFLADTYLFAGNERHKAHFTSKEAGEIAHAAQVKKLMLTHLPQHGD 217 Query: 246 YDMVLKS 252 + + + Sbjct: 218 LEQLREE 224 >gi|218233583|ref|YP_002365853.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218161540|gb|ACK61532.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 244 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|20094469|ref|NP_614316.1| beta-lactamase superfamily hydrolase [Methanopyrus kandleri AV19] gi|41017566|sp|Q8TWK0|RNZ_METKA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|19887565|gb|AAM02246.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methanopyrus kandleri AV19] Length = 279 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 99/315 (31%), Gaps = 93/315 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M LG G + VP + R+ L + T +++D Sbjct: 1 MDRELVMRFLGTGGA--VP----------SKD----RSHPGLLVEFSG-----TKLLIDC 39 Query: 61 GPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKH 117 G + + + + +DAVL TH H DH+ G+ L L R + VY Sbjct: 40 GEGTQRRAMEQGVTIHDVDAVLLTHHHVDHVAGLLPLATTVDLLHGRRLKVYGP------ 93 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + I + VIE +V + G + + +HG + ++ +R Sbjct: 94 ----------TAGSESALDISDLEVIEYREVNPGDEVEIGDLRVLVYESEHG-VPTVDYR 142 Query: 178 FG--NVAYCTDVNAF----PAESLEKL-------------------------------QN 200 + D P++ E L + Sbjct: 143 IETPKIPGKADPKYIRRVPPSKRREVLLRGERPYSLTKPGKISVYVKGDGRPADPENVRG 202 Query: 201 LDFLI--------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 L+ +A++ LHS+H E+ + +LTH+ +D + + + Sbjct: 203 CQVLVHEACFEDHEEAVRY-LHSTHL---EAAEVAREAGVDLLVLTHLSTKVDPERMREE 258 Query: 253 TPS---RVVPAFDGM 264 VV A DG+ Sbjct: 259 AREVFPVVVVARDGL 273 >gi|229084191|ref|ZP_04216477.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] gi|228699119|gb|EEL51818.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] Length = 244 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 33/208 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAVL +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVLLSHYHHDHVADIGVLQYARLITSMTKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y ++ F +L Y + E G Sbjct: 85 LPQLPIYGHGFDVQG--------FASLTHEPYTKGIVYNPEE--------TMQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCYAMRITAGDKVVVYSADSSYIPEF-VPFTKDADLFICECNMYVHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHV 242 H + +E + N K +LTH+ Sbjct: 187 AGHMNSTEVADIAKKANVKELLLTHLPH 214 >gi|255659999|ref|ZP_05405408.1| VicX protein [Mitsuokella multacida DSM 20544] gi|260847752|gb|EEX67759.1| VicX protein [Mitsuokella multacida DSM 20544] Length = 251 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 74/223 (33%), Gaps = 44/223 (19%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + E + S+D VL TH H DHI G+ L ++ + Sbjct: 20 DGVRLLLDAGISATRIKKGLAAEGIDAASLDGVLITHEHRDHIAGLVTLSKWY-----EL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++ ++H+ + P IE G + P Sbjct: 75 PIFTRRATIEHMSCR-----------SSIPAERFHAIEG-------AFCIGDLTIDPFSI 116 Query: 167 QHGRISSLGFRFGNVAYC---TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 H +G+R + C TD+ A E + D L+++A + H + Sbjct: 117 PHDAADPVGYRITGSSRCTLATDLGFVTASVQEAIDGADVLVLEANHDPEVLKHGDYPWA 176 Query: 224 LKKIELINPKNAILTHMHVDLDYDMV-----LKSTPSRVVPAF 261 L K IL++ + D +K P+ V A Sbjct: 177 L--------KRRILSNRGHLANADAAWALVRMKKRPAHVFLAH 211 >gi|16331469|ref|NP_442197.1| ribonuclease Z [Synechocystis sp. PCC 6803] gi|2500943|sp|Q55132|RNZ_SYNY3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|1001126|dbj|BAA10267.1| slr0050 [Synechocystis sp. PCC 6803] Length = 326 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 98/328 (29%), Gaps = 83/328 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RNRNVSSIALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 Q LR ++ + + TH H DHI G+ GL + I++Y +L Sbjct: 42 QHQFLRSEVKISQLTRIFITHLHGDHIFGLMGLLASSGLAGSGQGIEIYGPEGLGDYLEA 101 Query: 121 --SF-----------------RYCFKALDDRTYPPIVNPIV------IENNDVPICM--- 152 F ++ D + + ++ + +E P Sbjct: 102 CCRFSSTHLGKRLKVHTVRENGLIYEDKDFQVHCGLLKHRIPAYGYRVEEKQRPGRFNVE 161 Query: 153 --KSAGGVIEAIPILQQHGRISSL--GFRF------------GNVAYCTDVNAFPAESLE 196 ++ G I + G+ +L G R YCTD F E++ Sbjct: 162 QAEALGIPFGPIYGQLKQGKTVTLEDGRRIRGQDLCEPPEPGRKFVYCTDTV-FCEEAIA 220 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH------VDL 244 Q D L+ +A + H + + + + L N K I+TH L Sbjct: 221 LAQEADLLVHEATFAHQDAQLAFDRLHSTSTMAAQVALLANVKQLIMTHFSPRYAPGNPL 280 Query: 245 DYDMVLKSTP---SRVVPAFDGMQFSSP 269 + +L A D + P Sbjct: 281 QLENLLAEAQAIFPNTRLARDFLTVEIP 308 >gi|307568135|pdb|3JXP|A Chain A, Crystal Structure Of The Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida Length = 321 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 92/313 (29%), Gaps = 63/313 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S ++ + Sbjct: 3 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNA 58 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 59 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 113 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 114 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPY 170 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 S F G + Y + + L + D L++D Sbjct: 171 SPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDE 230 Query: 210 -----------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYD--MVLKST 253 + H + +L+ ++ + +L H++ LD + + Sbjct: 231 MQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVL 290 Query: 254 PSRVVPAFDGMQF 266 V AFDGM Sbjct: 291 RRGVEVAFDGMSI 303 >gi|218896139|ref|YP_002444550.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228964145|ref|ZP_04125268.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|218544692|gb|ACK97086.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228795495|gb|EEM42979.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar sotto str. T04001] Length = 244 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R G V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDGAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSNLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|160938044|ref|ZP_02085401.1| hypothetical protein CLOBOL_02937 [Clostridium bolteae ATCC BAA-613] gi|158439038|gb|EDP16793.1| hypothetical protein CLOBOL_02937 [Clostridium bolteae ATCC BAA-613] Length = 265 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G + +Q ++ ++ +L TH H+DHI G+ L +K I Sbjct: 20 DSTHLLVDAGISNKRIQQGLNEIGLTGNDVNGILITHEHSDHIKGLG-----VLSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + + D P+ + G + P Sbjct: 75 PIYGTRETLDEIAAAGS--LGKFDKGLLTPVCP-----------DLDFMVGDLTVKPFKI 121 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + +R N VA TD+ F ++ LQ LD L++++ L+ G + Sbjct: 122 DHDAANPVAYRVQNGEKSVAVATDMGHFDQYIIDHLQGLDALLLESNHDVRMLETGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + K +L H+ + +Y+ + T Sbjct: 182 YLKRRILGDHGHLSNENAGRLLNCVLHDRLKKILLGHLSKENNYEELAYET 232 >gi|257875792|ref|ZP_05655445.1| ribonuclease Z [Enterococcus casseliflavus EC20] gi|257809958|gb|EEV38778.1| ribonuclease Z [Enterococcus casseliflavus EC20] Length = 318 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +SL + + ER N + D G Sbjct: 1 MELEFLGTGA--GVPA--------------KHRNVTSLALRLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 MQ+L + I+ + TH H DHI+G+ GL Q P+++Y ++ Sbjct: 43 QMQILHSTIRPRKIEKIFITHLHGDHIYGLPGLISSRSFQGGDTPLEIYGPKGIKAYVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 R + +YP E + I K E + HG I S G+R Sbjct: 103 VLR---ISQTKVSYP----LHFFEIEEEGILFKDQ--QFEVSCLRLDHG-IDSFGYRI 150 >gi|300864779|ref|ZP_07109629.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] gi|300337183|emb|CBN54777.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] Length = 303 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 40/254 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLS---IDA-VLYTHPHADHIHGIDGLRGYFL 100 S + R +I D G +L EQ+ ++A + +TH H DHI G F+ Sbjct: 54 SCLEMRVGGKRLIFDGGTGLR--MLGEQLQQEMPVEAYMFFTHYHWDHIQGFPLFAPAFI 111 Query: 101 KQKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +Y + P + + F + P + ++ I Sbjct: 112 P-GNCFHIYGSIPPDSESMKRHFIERVLHPN-SPVPLQGIQADLRFYELKRHETMMLDDI 169 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP----AESLEKLQNLDFLIIDAL-- 209 E H +++G+R +V YC+D FP E + D LI DA+ Sbjct: 170 EIRTGSLNHPN-TAMGYRITWRGKSVVYCSDTEHFPDRLDENVYELALDADVLIYDAMYT 228 Query: 210 KNGLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVLKS 252 H+ H + E++K + K ++ H D + + V Sbjct: 229 DEEYHNPKSPKVGWGHSTWQEAVKMAQAAGVKRVVI--FHHDPAHSDDVLDKIGEEVQHV 286 Query: 253 TPSRVVPAFDGMQF 266 P V+ A +G+ Sbjct: 287 FPKAVM-AREGLIL 299 >gi|256027348|ref|ZP_05441182.1| metal dependent hydrolase [Fusobacterium sp. D11] gi|289765316|ref|ZP_06524694.1| Zn-dependent hydrolase [Fusobacterium sp. D11] gi|289716871|gb|EFD80883.1| Zn-dependent hydrolase [Fusobacterium sp. D11] Length = 260 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ +I D + ++ P Sbjct: 75 PIYITPESYRA-------------GAVKLGEIDKSLINFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H + ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCQYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|260588622|ref|ZP_05854535.1| VicX protein [Blautia hansenii DSM 20583] gi|331082026|ref|ZP_08331154.1| hypothetical protein HMPREF0992_00078 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541097|gb|EEX21666.1| VicX protein [Blautia hansenii DSM 20583] gi|330405621|gb|EGG85151.1| hypothetical protein HMPREF0992_00078 [Lachnospiraceae bacterium 6_1_63FAA] Length = 265 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 53/234 (22%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQK 103 T ++VD G + E + SI+ +L TH H+DHI G+ + +K Sbjct: 20 DTTGLLVDVGISGKR---IEEGLRSINHTTGDCNGILVTHEHSDHIKGLG-----VISRK 71 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +Y M+ + + K + +P IE N + G +E P Sbjct: 72 YKIPIYCTRGTMEAM-QGMSSLGKMPEGLFHP-------IEANK-----RFQIGDLEIQP 118 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H +G+R +V TD+ + ++ L LD L+++A L+ G Sbjct: 119 FAISHDAAEPVGYRVNQGEKSVGIATDLGYYDEYIVQNLSGLDVLLLEANHDVNMLQVGS 178 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + H S + + + + K L H+ + +Y+ + T Sbjct: 179 YPYYLKQRILGKRGHLSNETAGRLLCRLLHDQMKAVFLGHLSRENNYEALAYET 232 >gi|296501794|ref|YP_003663494.1| metal-dependent hydrolase [Bacillus thuringiensis BMB171] gi|296322846|gb|ADH05774.1| metal-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 244 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ T + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTETKQIFSGHITLAHSGYVWNS 244 >gi|30022222|ref|NP_833853.1| ribonuclease Z [Bacillus cereus ATCC 14579] gi|228922891|ref|ZP_04086189.1| Ribonuclease Z [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228960410|ref|ZP_04122062.1| Ribonuclease Z [Bacillus thuringiensis serovar pakistani str. T13001] gi|229111615|ref|ZP_04241166.1| Ribonuclease Z [Bacillus cereus Rock1-15] gi|229129421|ref|ZP_04258392.1| Ribonuclease Z [Bacillus cereus BDRD-Cer4] gi|229146717|ref|ZP_04275083.1| Ribonuclease Z [Bacillus cereus BDRD-ST24] gi|229152342|ref|ZP_04280535.1| Ribonuclease Z [Bacillus cereus m1550] gi|296504633|ref|YP_003666333.1| ribonuclease Z [Bacillus thuringiensis BMB171] gi|41017542|sp|Q818V3|RNZ_BACCR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29897779|gb|AAP11054.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|228631304|gb|EEK87940.1| Ribonuclease Z [Bacillus cereus m1550] gi|228636737|gb|EEK93201.1| Ribonuclease Z [Bacillus cereus BDRD-ST24] gi|228654026|gb|EEL09893.1| Ribonuclease Z [Bacillus cereus BDRD-Cer4] gi|228671997|gb|EEL27290.1| Ribonuclease Z [Bacillus cereus Rock1-15] gi|228799271|gb|EEM46236.1| Ribonuclease Z [Bacillus thuringiensis serovar pakistani str. T13001] gi|228836946|gb|EEM82289.1| Ribonuclease Z [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325685|gb|ADH08613.1| ribonuclease Z [Bacillus thuringiensis BMB171] Length = 307 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|302865660|ref|YP_003834297.1| beta-lactamase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315502224|ref|YP_004081111.1| beta-lactamase domain protein [Micromonospora sp. L5] gi|302568519|gb|ADL44721.1| beta-lactamase domain protein [Micromonospora aurantiaca ATCC 27029] gi|315408843|gb|ADU06960.1| beta-lactamase domain protein [Micromonospora sp. L5] Length = 248 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 45/248 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S P + S + +++D G Sbjct: 1 MRLTVLGCAGSFPGPE-----------------SPCSAYL----MEAEGFRLLIDFGVGS 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAPDCMKH 117 + R + + DA+L TH H DH+ D + +++ P+ +YA Sbjct: 40 LSTLQRYVGLHAPDAILLTHLHCDHM--FDAVSYVVVRRYAPDGPYPPLPMYAPSGAPDR 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L ++ +++D + P + + +E + +HG Sbjct: 98 LATAYGQEEGSVEDVYQFYGLQPGTFPIGPFTVTVDRMNHPVETYGVRLEHGGRV----- 152 Query: 178 FGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALK----NGLHSSHFSLSESLKKIELINP 232 Y D P E+L +L Q+ D + +A H + E+ + Sbjct: 153 ---FCYSADTA--PCEALLRLAQDADVFLCEASYMDGVENPPDLHLTGREAGEAATKAGV 207 Query: 233 KNAILTHM 240 +LTH+ Sbjct: 208 GRLLLTHL 215 >gi|227823520|ref|YP_002827493.1| putative hydrolase [Sinorhizobium fredii NGR234] gi|227342522|gb|ACP26740.1| putative hydrolase [Sinorhizobium fredii NGR234] Length = 289 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 91/306 (29%), Gaps = 69/306 (22%) Query: 6 HFTILGCGASLGVP--RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG S G P R G W +S + T++VD G Sbjct: 4 RLVLLG---SKGGPAIRPGGPWP-------------TSSLLEIAG-----RTIVVDCGLG 42 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKH-- 117 + V S+D + TH H+DH+ + L + P+ V+ + Sbjct: 43 VTRGLTDAGVSLKSLDLIFVTHLHSDHVLELGPLIHTAWTAGLAHPVCVFGPAGTRAYWQ 102 Query: 118 -LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLG 175 +S + P + ++E + + + + H ++ Sbjct: 103 GFLQSMAFDVDIRIVDEGRPDLR-RLVEVIEFSDGQVVSENGLTVSALRVDHPPVTDCFA 161 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LKNGL 213 RF G + + +D FP + + D L+ +A LK L Sbjct: 162 LRFDHAAGTIVFSSDTAYFPPLA-DFASGADILVHEAMLAAGVDRLVARTGNGARLKEHL 220 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM-----------VLKSTPSRVVPAFD 262 +SH ++ +L H + D KS P + A D Sbjct: 221 LASHTFAEQAGTIAAAAGVGRLVL---HHLIPADDPEVSQADWIAAARKSWPGALTIASD 277 Query: 263 GMQFSS 268 G+ Sbjct: 278 GLVVEF 283 >gi|222444969|ref|ZP_03607484.1| hypothetical protein METSMIALI_00585 [Methanobrevibacter smithii DSM 2375] gi|222434534|gb|EEE41699.1| hypothetical protein METSMIALI_00585 [Methanobrevibacter smithii DSM 2375] Length = 306 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 91/284 (32%), Gaps = 51/284 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T LG G G + A RR +I + + VD GP Sbjct: 1 MKITFLGTG--------GGRFSA-----ISQRRMTGGFRIDNL----NGKNYHVDPGPGA 43 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-----VYAAPDCMKH 117 ++D V +H H DH + R + V + Sbjct: 44 LVRTYQFGFDPRNLDGVFVSHAHTDHYN---DAEILIEAMTRGMTKEYGVVLGNKSVLDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 K + ++ P +EN + G ++ HG +GF+ Sbjct: 101 YERWGPGISKYHQSHSKKYVLEPNQVENIN--------GCSVKGT--KTVHGDPEGVGFQ 150 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELIN 231 ++Y +D F + + + D LI L+ G H ++ ++ + Sbjct: 151 IDYRGFKISYTSDTGYF-EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVK 209 Query: 232 PKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 PK AI+TH + + + + K T + + AFDGM F Sbjct: 210 PKLAIMTHFGLKMLSIDPIDEAKRITKETGVKTLAAFDGMSFEV 253 >gi|148654755|ref|YP_001274960.1| beta-lactamase domain-containing protein [Roseiflexus sp. RS-1] gi|148566865|gb|ABQ89010.1| beta-lactamase domain protein [Roseiflexus sp. RS-1] Length = 254 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 20/205 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + + + + V++D G Y ++LR V + A++ TH HADH++G+ GL + LK Sbjct: 20 THMVWKAPDGAVLIDAGGSTYQRLLRAGVNPHDLRALILTHSHADHVNGLPGLL-FSLKL 78 Query: 103 ---KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 R + +Y + +A D Y P V+ IE D + +A + Sbjct: 79 SGYNRRLVIYGNAPTLAAAQR----IVEAFDLGEYQPDVDWTPIEAGDEIVFDDAAYRIR 134 Query: 160 EAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 A + H R L RF + + Y D + LI +A Sbjct: 135 TAATV---HSR-PCLALRFDSEDGRALVYSADTEPC-DAVRNLARGASVLIHEATTPEPF 189 Query: 215 SSHFSLSESLKKIELINPKNAILTH 239 H S ++ + +L H Sbjct: 190 PGHTSPYQAGEVAAAAGVARLVLVH 214 >gi|15679819|ref|NP_276937.1| hypothetical protein MTH1831 [Methanothermobacter thermautotrophicus str. Delta H] gi|41017519|sp|O27859|RNZ_METTH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|2622965|gb|AAB86297.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 307 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 101/325 (31%), Gaps = 89/325 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG ++ VP KN R +S+ + E + D G Sbjct: 2 MEVTFLGTSSA--VP-------------SKN-RNHTSIALRIPGEI-----FLFDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAP---DCMKH 117 Q+ + + + TH H DHI GI G+ F ++ P+D+Y P + + Sbjct: 41 QRQMALAGISPMKVTRIFITHLHGDHILGIPGMIQSMGFRGREEPLDIYGPPGIHELHEC 100 Query: 118 LFES--------------------------------------FRYCFKALDDRTYPPIVN 139 + + YCF +++ P + Sbjct: 101 IMKMGYFTLDFDINVHEVRGGTVVEEDDYRVTSAPASHSVFNLAYCF---EEKKRPRFLR 157 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRI---SSLGF--RFGNVAYCTDVNAFPAES 194 I P + G + IP+ I LG + V Y D P ES Sbjct: 158 EKAIALGLKPGP--AFGKLHRGIPVRVGDRIIMPEEVLGSPRKGVKVCYSGDTR--PCES 213 Query: 195 LEKL-QNLDFLI-IDALKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + KL + + LI L+ G H + E+ + K ILTH+ Sbjct: 214 VIKLAEGAELLIHESTLEAGSEDKAAESGHSTAREAAEVARSAGVKRLILTHLSTRYKRT 273 Query: 248 MVLKSTPSRVVP----AFDGMQFSS 268 V+ +V P A D M Sbjct: 274 EVILEAARQVFPVTDVADDLMTVEV 298 >gi|148643533|ref|YP_001274046.1| beta-lactamase superfamily hydrolase [Methanobrevibacter smithii ATCC 35061] gi|148552550|gb|ABQ87678.1| metal-dependent hydrolase, beta-lactamase superfamily [Methanobrevibacter smithii ATCC 35061] Length = 306 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 92/284 (32%), Gaps = 51/284 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T LG G G + A RR +I + + VD GP Sbjct: 1 MKITFLGTG--------GGRFSA-----ISQRRMTGGFRIDNL----NGKNYHVDPGPGA 43 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-----VYAAPDCMKH 117 ++D V +H H DH + R + V + Sbjct: 44 LVRTYQFGFDPRNLDGVFVSHAHTDHYN---DAEILIEAMTRGMTKEYGVVLGNKSVLDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + K + ++ P +EN + G ++ HG +GF+ Sbjct: 101 YEKWGPGISKYHQSHSKKYVLEPNQVENIN--------GCSVKGT--KTVHGDPEGVGFQ 150 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELIN 231 ++Y +D F + + + D LI L+ G H ++ ++ + Sbjct: 151 IDYRGFKISYTSDTGYF-EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVK 209 Query: 232 PKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 PK AI+TH + + + + K T + + AFDGM F Sbjct: 210 PKLAIMTHFGLKMLSIDPIDEAKRITKETGVKTLAAFDGMSFEV 253 >gi|320010552|gb|ADW05402.1| beta-lactamase domain protein [Streptomyces flavogriseus ATCC 33331] Length = 250 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 38/240 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + R +++D G ++ R + +DA+ +H HADH ID + Sbjct: 20 SSYLVEADGFR-----LLLDMGNGALGELQRHVGLYDLDAIFLSHLHADHC--IDMCAYF 72 Query: 99 FLK-----QKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 ++ RP + VY + L + D + + +++ I Sbjct: 73 VVRYYRFDGGRPAAVPVYGPEGTEQRLTTAHA---DTPSDHAMSEVFDFHTLKSGSFEI- 128 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 G +H + + G R + + Y D E + D + + Sbjct: 129 -----GPFSVRTEKLRH-PVDTFGIRVEHSGRTLTYSGDTGTC-EALAELAEGSDLFLCE 181 Query: 208 AL----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 A K + H + E+ + +LTH+ + ++ +DG Sbjct: 182 ASFVHGKEDIPDLHLNGREAGEYAARAGAGRLVLTHI---PPWTDADRNLADAREV-YDG 237 >gi|75908619|ref|YP_322915.1| ribonuclease Z [Anabaena variabilis ATCC 29413] gi|75702344|gb|ABA22020.1| RNAse Z [Anabaena variabilis ATCC 29413] Length = 345 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 102/337 (30%), Gaps = 104/337 (30%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG S GVP R S R+ +R + D G Sbjct: 25 QITFLGT--SSGVPT---------------RARNVSSVALRLPQRAEL--WLFDCGEGTQ 65 Query: 66 MQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFES 121 Q+LR +V + + TH H DHI G+ GL +D+Y +++ + Sbjct: 66 HQILRSDLKVSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVQRVDIYGPSGLNEYIQSA 125 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----- 176 RY + +YP I+ + V + L H RI++ G+ Sbjct: 126 SRY---SHTHFSYP-------IKIHTVRPGVIYEDDEFTVTCGLLHH-RITAFGYRVAEK 174 Query: 177 ----RFG---------------------------------------------NVAYCTDV 187 RF +AYCTD Sbjct: 175 DRAGRFDIEKAKELQIPPGRVYGQLKRGETVTLEDGRVINGAELCGPTEIGRKMAYCTDT 234 Query: 188 NAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++E Q+ D LI +A + H + + + + + ++TH Sbjct: 235 IYC-DGAVELAQDADVLIHEATFAHQDSEMAFQRLHSTTTMAAQTALAAGVRRLLMTHFS 293 Query: 242 ------VDLDYDMVLKSTP---SRVVPAFDGMQFSSP 269 ++ +L+ R A+D M + P Sbjct: 294 PRYAPGNTIELKDLLQEARAIFPRTDMAYDFMTYEVP 330 >gi|229047834|ref|ZP_04193414.1| Ribonuclease Z [Bacillus cereus AH676] gi|228723626|gb|EEL74991.1| Ribonuclease Z [Bacillus cereus AH676] Length = 307 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSISTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|154483096|ref|ZP_02025544.1| hypothetical protein EUBVEN_00797 [Eubacterium ventriosum ATCC 27560] gi|149735904|gb|EDM51790.1| hypothetical protein EUBVEN_00797 [Eubacterium ventriosum ATCC 27560] Length = 302 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 92/316 (29%), Gaps = 79/316 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P RR ++L + +++D G Sbjct: 6 LLGTGGMMPLP----------------RRWLTALMCRY-----NGKNILIDCGEGT-QVA 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP---DCMKHLFE 120 ++E+ ID + TH HADHI G+ GL ++ P+ + + L Sbjct: 44 IKEKGWTFKPIDVICITHYHADHISGLPGLLLTMGNAERTEPLTMIGPRGLTKVVNALRT 103 Query: 121 S-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 F F L + I+ V + G IE Sbjct: 104 IAPELPFDINFIELTEGEQTLEFEDFRIKAFRVKHNIVCYGYSIEIDRGGKFNPEAAKKL 163 Query: 162 -IPIL-----QQHGRISSLGFRFG------------NVAYCTDVNAFPAESLEKLQNLDF 203 IPI Q+ + G F V Y TD P E + D Sbjct: 164 NIPIRSWGKLQKGETVEVDGVTFTPDMVVGAPRKGLKVTYTTDTRPVP-VIAEAAKGADL 222 Query: 204 LIIDALKNGLH-------SSHFSLSESLKKIELINPKNAILTHMHVD----LDYDMVLKS 252 I + + H + E+ K + PK LTH L+Y + Sbjct: 223 FICEGMYGEPDKDAKAREHKHMTFKEAAKIAKEAQPKEMWLTHFSPSLVRPLEYMDTVTD 282 Query: 253 TPSRVVPAFDGMQFSS 268 DGM + Sbjct: 283 IFENAKAGKDGMSVNL 298 >gi|167758304|ref|ZP_02430431.1| hypothetical protein CLOSCI_00642 [Clostridium scindens ATCC 35704] gi|167664201|gb|EDS08331.1| hypothetical protein CLOSCI_00642 [Clostridium scindens ATCC 35704] Length = 265 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 47/232 (20%) Query: 51 GSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +T ++VDTG + + ++ +L TH H DHI G+ +K Sbjct: 19 DDDTHLLVDTGISKKRIEQGLHTLGIKGEELNGILITHEHVDHIQGLG-----VFSRKYG 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +YA ++ + C +L +DVP+ + G + P Sbjct: 74 IPIYATRGTIEGIR-----CCTSLGKMP--------EGLLHDVPVDETFSLGGMSIRPFA 120 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H G+R N VA TD+ + ++ L++L+ ++++A L+ G + Sbjct: 121 ISHDAKEPSGYRIENETKSVAVATDLGKYDEYTVAHLKDLNAVVLEANHDIHMLEVGPYP 180 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + I N + +L H+ + +Y+ + T Sbjct: 181 YPLKRRVAGDKGHLSNELSGRLLCDILHDNLQYVVLGHLSKENNYEELAYET 232 >gi|120537051|ref|YP_957108.1| beta-lactamase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326886|gb|ABM21193.1| beta-lactamase domain protein [Marinobacter aquaeolei VT8] Length = 283 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 74/216 (34%), Gaps = 29/216 (13%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G + + SS +IS + + +++D GPD Y V Sbjct: 7 FLGTGGAH-------------SEDL----GSSSARISLPNSQ----NMLIDFGPDTYFSV 45 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ DA+ TH H DH+ G++ L K++R I +Y + L + F Sbjct: 46 NTRKL-QFDAIFITHAHLDHVGGLERLFFSVAFKKQRLIKLYVPVSLVTRLHQIFGMAGS 104 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-GNVAYCTD 186 + + + + +G P+ H + G G Y D Sbjct: 105 QVAEGG---KNFWDCFQLIPITDYFYFSGYRFNVFPVR-HHFPGEAFGLALPGCFVYTGD 160 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 P + + + + DA + +H +L + Sbjct: 161 TRPIPEQLVAHAGRGELIFHDAT-TSSNPAHSALDD 195 >gi|291550066|emb|CBL26328.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus torques L2-14] Length = 265 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ +++DTG + L + +D +L TH H+DHI G+ +K I Sbjct: 20 DNSHLLIDTGISKKRIEEGLNKLEIKGDELDGILITHEHSDHIKGLG-----VFSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA P + + ES + + +++PI ++ G ++ P Sbjct: 75 PIYATPGTIAGIKES------SSLGKMPEGLLHPIKTDH-------PFRLGELDVHPFAI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H G+R +VA TD+ + +++ L+NLD ++++A H H Sbjct: 122 SHDANEPSGYRIEQGGKSVAVATDLGKYDDYTVKNLKNLDAILLEA----NHDIHM 173 >gi|239626378|ref|ZP_04669409.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516524|gb|EEQ56390.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 265 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 86/231 (37%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G + +Q ++ + +L TH H+DHI G+ L +K I Sbjct: 20 DDTHILVDAGISNKRIQQGLNEIGLTGNDMSGILITHEHSDHIKGLG-----VLSRKYHI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + ++ P+ + + G + P Sbjct: 75 PVYGTRETLDEI------ACSSSLGEFDRELLTPVCPD-------VDFMLGDLHVKPFSI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + +R +VA TD+ F ++ LQ LD L++++ L+ G + Sbjct: 122 DHDAANPVAYRVRCGSKSVAVATDMGHFDQYIIDNLQGLDALLLESNHDVRMLETGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + K L H+ + +Y+ + T Sbjct: 182 YLKRRILGDHGHLSNENAGRLLNCVLHDKLKKIFLGHLSKENNYEELAYET 232 >gi|282899217|ref|ZP_06307191.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505] gi|281195900|gb|EFA70823.1| Beta-lactamase-like protein [Cylindrospermopsis raciborskii CS-505] Length = 318 Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 62/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR ++ + + TH H DHI G+ GL +D+Y ++L Sbjct: 42 QHQILRSDLKISQLSRIFITHLHGDHIFGLMGLLASCGLAGNVERVDIYGPAGLNEYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + RY + +YP I+ + V + + H RI++ G+R Sbjct: 102 ASRY---SHTHFSYP-------IKVHTVQPGVIYEDEEFTVTCGMLHH-RITAFGYRV 148 >gi|75759370|ref|ZP_00739466.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904014|ref|ZP_04068120.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 4222] gi|74493137|gb|EAO56257.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228855610|gb|EEN00164.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 4222] Length = 244 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R G V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDGAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSNLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|218232078|ref|YP_002368944.1| ribonuclease Z [Bacillus cereus B4264] gi|254808610|sp|B7HB12|RNZ_BACC4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218160035|gb|ACK60027.1| ribonuclease Z [Bacillus cereus B4264] Length = 307 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLKVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|37523688|ref|NP_927065.1| hypothetical protein gvip548 [Gloeobacter violaceus PCC 7421] gi|41017535|sp|Q7NDW3|RNZ_GLOVI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|35214693|dbj|BAC92060.1| ycf56 [Gloeobacter violaceus PCC 7421] Length = 317 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 94/317 (29%), Gaps = 83/317 (26%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG S G P T +N +S+ + + D G Sbjct: 3 LTFLGT--SSGTP-----------TRSRNV---TSIALQLPQRSSL---WLFDCGEGTQH 43 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFES 121 QVLR + ++ V +TH H DH+ G+ GL R P+ +Y P +++ + Sbjct: 44 QVLRTPLRLSQLEKVFFTHLHGDHLFGLVGLLASRALGSAGTTPVKLYGPPGLQEYVRAT 103 Query: 122 FRY--------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI--EAIPILQQHGRI 171 RY + + N + + + G + P R Sbjct: 104 LRYSDTHINYPIHFQTVEPGLVLSEEGFTVLANALKHRISAFGYSVIEHDQPGRFDAERA 163 Query: 172 SSLGFRFG---------------------------------NVAYCTDVNAFPAESLEKL 198 + LG FG + YC+D P ++E Sbjct: 164 AQLGIPFGPLYGQLKAGRTVALPDGRTVDGRTLVGPERKGRKLTYCSDTIYTP-SAIELA 222 Query: 199 QNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 D LI +A L H + + + + + ILTH Y+ L + Sbjct: 223 LGADVLIHEATYCEADLNLAERGLHSTAAMAARVAREAKVRQLILTHFSPR--YEAGLAA 280 Query: 253 TP-------SRVVPAFD 262 V A D Sbjct: 281 LRTEAEAIFPNVRMAED 297 >gi|284166129|ref|YP_003404408.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015784|gb|ADB61735.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 244 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 92/270 (34%), Gaps = 51/270 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R ++ + + T++VD G Sbjct: 1 MRVTFLGSGSAM----------------PTGERFQTGILVQE-----DGRTLLVDCGSGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFES 121 ++ + V ++ VL TH H DH+ + L ++V K L + Sbjct: 40 LHRLQQSGVGYENVSTVLLTHHHLDHVADLLPLMKARWLAGEDHLEVVGPQGT-KSLLDD 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + + D+ ++ V E + + +H + L +RFG+ Sbjct: 99 LLDVHEYMQDK-----LDLRVREVVAGEFSVAG----FDVSAYETRHS-LPCLAYRFGDL 148 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIELINPKNA 235 Y D AF + L D H + +L E+L E+ Sbjct: 149 FTYSGDSEAFAGLA-NFADGSAILAHDCSFPDDVDVSNHPTPKTLGEALAGTEI---GRV 204 Query: 236 ILTHM--HVDLDYDMVLKSTPSRVVPAFDG 263 LTH+ H D +D +L+S + +DG Sbjct: 205 YLTHLYPHTDGRHDEMLESIGAH----YDG 230 >gi|159028812|emb|CAO89983.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 318 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MEITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEI--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+LR + I + TH H DHI G+ GL + ID+Y P +L Sbjct: 42 QHQLLRSDLKSSQIRRIFITHMHGDHIFGLIGLLASIGLAGSAQDIDIYGPPGLGDYLRA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y + L +R ++P ++ ++ L +H RI + G+R Sbjct: 102 CAKYSYTNLANRVRVHPISPGILYEDE----------EFTVSCQLLKH-RIPAHGYRI 148 >gi|308174175|ref|YP_003920880.1| ribonuclease Z [Bacillus amyloliquefaciens DSM 7] gi|307607039|emb|CBI43410.1| ribonuclease Z [Bacillus amyloliquefaciens DSM 7] gi|328554118|gb|AEB24610.1| ribonuclease Z [Bacillus amyloliquefaciens TA208] gi|328912510|gb|AEB64106.1| ribonuclease Z [Bacillus amyloliquefaciens LL3] Length = 308 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 95/337 (28%), Gaps = 103/337 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA + P R +S+ + + ER + + D G Sbjct: 1 MELIFLGTGAGM----------------PAKTRNVTSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DH++G+ GL G Q + +Y + Sbjct: 43 QHQILHTTIKPRKIEKIFITHLHGDHVYGLPGLLGSRSFQGGEEELAIYGPKGIKAFIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S + TYP + IE V HG + + G+R Sbjct: 103 SLK---VTATHLTYP--LAIHEIEEGTV-----FEDDQFIVTAASVIHG-VEAFGYRIQE 151 Query: 179 ----------------------------GNVAYCTDVNAFPAESL--------------- 195 G D E Sbjct: 152 KDIPGALQAGRLKEMNIPPGPVYQKIKKGETVTLDDGRIINGEDFLEPPKKGRIVAFSGD 211 Query: 196 --------EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E +N D L+ +A K + H + ++ + + K ILTH+ Sbjct: 212 TRVSERVTELARNADVLVHEATFAKEDAKLAHNYYHATTEQAAQTAKKAGAKQLILTHIS 271 Query: 242 V---------DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 L+++ K+ AFD M+ + Sbjct: 272 ARYQGEAPIERLEHE--AKAVFENSKVAFDFMEVAVE 306 >gi|312622630|ref|YP_004024243.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203097|gb|ADQ46424.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 240 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 84/235 (35%), Gaps = 35/235 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R T ++++ G ++L I ++ +H HADH + LR Y + + ID+ Sbjct: 25 RTKETNILLECGSGVLTRLLNFISFDEISFIICSHLHADHTSDLGVLRYYLASRGKEIDL 84 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + K D + IENN M++ G + + QH Sbjct: 85 YIPSE------------PKEEYDLIRKGVYRVKEIENN-----MEAKIGNLTIKFLEGQH 127 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK--------NGLHSS 216 S R + D F + +E ++ D L+++A Sbjct: 128 S-YKSFAVRIEVDDKVFGFSGDT-GFKEDLIEFFKDADVLLLNAAYTDKEVEKIEPEKRF 185 Query: 217 HFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H S ++ + + N K +LTH+ + ++ + K VV A D + Sbjct: 186 HLSPKQAAEIAKRANTKLLVLTHLKPECNEKEHLLSAKEIFDNVVLATDMDKIEF 240 >gi|116511522|ref|YP_808738.1| beta-lactamase superfamily hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|116107176|gb|ABJ72316.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactococcus lactis subsp. cremoris SK11] Length = 250 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 76/226 (33%), Gaps = 36/226 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL--- 100 S + + S +++D G ++ E Q +DAV+ +H H DHI + LR Y Sbjct: 21 SYLLQSESGFNMLLDCGSRAVTELEHELQPTQLDAVILSHYHEDHIADLGALRQYRQLYP 80 Query: 101 -----KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +Y + Y F L+ E + + + Sbjct: 81 LGQDGWDGMMLPIYGHGE--------NEYEFSKLNLDKVS--------EGHLYDVENGTK 124 Query: 156 GGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H ++ R + Y D F + E + D L+ D Sbjct: 125 VGPFDITFLKTVHPVVN-YAMRIVERRTGQVLVYTGDTGYFDELT-EFAKEADLLLADVY 182 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +H S E+ + + K ILTH+ D D++L Sbjct: 183 FFKDKAKMPNHLSSIEAGQIAKEAKVKKLILTHLPQFGDLDILLTE 228 >gi|86739584|ref|YP_479984.1| beta-lactamase-like protein [Frankia sp. CcI3] gi|86566446|gb|ABD10255.1| beta-lactamase-like [Frankia sp. CcI3] Length = 270 Score = 72.5 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 91/283 (32%), Gaps = 56/283 (19%) Query: 4 YYHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILGC G G +S S + E +++D G Sbjct: 21 TVKLTILGCSGTYPG---------------------PTSACSSYLVESDDGFRLVLDAGN 59 Query: 63 DFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCM 115 ++ R + IDAVL +H H DH +D + + ++ P + VY + Sbjct: 60 GSMGELQRHCDLREIDAVLLSHLHGDHC--LDLVANSYARRYHPEGMPPKLPVYGPINTQ 117 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L F+ D + I + I + G H + + G Sbjct: 118 ERLCG----AFEKWPDDSLADIYDFRTIGAG------RLHIGPFRIDLTRVAH-PVEAYG 166 Query: 176 FRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKI 227 R + Y D A + + D + +A ++ H + E+ + Sbjct: 167 IRLTADDRVLTYSGDTGAC-DRLVRLATDSDLFLCEASFLDEEDNPPDLHLTGREAGEHA 225 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG-MQFSSP 269 +LTH+ V + + V +DG + +SP Sbjct: 226 RRAGVGQLVLTHL-VPWGNAARSEEEAAGV---YDGPLTLASP 264 >gi|217322877|ref|YP_002325638.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii AB307-0294] gi|213986416|gb|ACJ56715.1| coenzyme PQQ biosynthesis protein B [Acinetobacter baumannii AB307-0294] Length = 256 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 35/230 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C T N RT+SS+ IS ++++ Sbjct: 1 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I V+ DH G+ L++ PI+V+ Sbjct: 57 SPDIRQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPINVWCT 111 Query: 112 PDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQH 168 + L F K + ++P D ++ +I+ A P H Sbjct: 112 EMVYQDLTTGFPVFNMLKHWNGGLQYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPH 171 Query: 169 GRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + Y + + ++ +Q+ D ++ID Sbjct: 172 RHDPHEGDNIALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDG 221 >gi|34762341|ref|ZP_00143344.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887995|gb|EAA25059.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 260 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRA-------------GAVKLGEIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H + ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|327400611|ref|YP_004341450.1| beta-lactamase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316119|gb|AEA46735.1| beta-lactamase domain protein [Archaeoglobus veneficus SNP6] Length = 231 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 88/250 (35%), Gaps = 62/250 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD--TGP 62 T LG G ++ ++ +S + + + +++D G Sbjct: 1 MKVTFLGTGTAV-----------------DTQKAQSCVLVE------DSARILIDIGCGA 37 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPIDVYAAPDC---M 115 + + +V IDAVL TH H DH L +L+ +++Y P + Sbjct: 38 FRRLGDVGVRVEEIDAVLITHNHLDHNA---DLLPLLKARWLENAGKLEIYGPPGTKAFV 94 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L E+F Y + E N+ + G +E IP H +S Sbjct: 95 ESLLEAFPYL------------RQKLSFEVNEES-SFEVCGMKVETIPTF--HSIVSRAY 139 Query: 176 FRFGNVAYCTDVNAFPAE-SLEKLQNLDFLI----IDALKNGLHSSHFSLSESLKKIELI 230 G + D AFP S+E D LI + + ++ H++ ++ E L Sbjct: 140 VIDGALVVSGDTRAFPELFSIE----CDALIHELSLPSGQSDFHTTPENMKECLD---KA 192 Query: 231 NPKNAILTHM 240 + THM Sbjct: 193 KAERIFYTHM 202 >gi|316934875|ref|YP_004109857.1| coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris DX-1] gi|315602589|gb|ADU45124.1| coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris DX-1] Length = 308 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 21/128 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C +P+ RRT++S+ +S E +++ P Sbjct: 2 LRVIVLGAAAGGGVPQWNCGCAVCRAAFADPELRRTQASVAVSSDGEHW----FLINASP 57 Query: 63 DFYMQVL-------REQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D Q++ R L I V+ T+ D + G+ +R + P +YA Sbjct: 58 DLRQQIIATPQLHPRAGALRHSPIAGVILTNGEVDAVAGLLSMR-----EGWPFTIYAHA 112 Query: 113 DCMKHLFE 120 + L Sbjct: 113 KVLAILKA 120 >gi|282896117|ref|ZP_06304143.1| Beta-lactamase-like protein [Raphidiopsis brookii D9] gi|281199035|gb|EFA73910.1| Beta-lactamase-like protein [Raphidiopsis brookii D9] Length = 310 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 62/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR ++ + + TH H DHI G+ GL +D+Y ++L Sbjct: 42 QHQILRSDLKISQLSRIFITHLHGDHIFGLMGLLASCGLAGNVERVDIYGPAGLNEYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + RY + +YP I+ + V + + H RI++ G+R Sbjct: 102 ASRY---SHTHFSYP-------IKVHTVQPGVIYEDEEFTVTCGMLHH-RITAFGYRV 148 >gi|77166078|ref|YP_344603.1| pyrroloquinoline quinone biosynthesis protein PqqB [Nitrosococcus oceani ATCC 19707] gi|254436295|ref|ZP_05049802.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus oceani AFC27] gi|123593501|sp|Q3J7X3|PQQB_NITOC RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|76884392|gb|ABA59073.1| Coenzyme PQQ biosynthesis protein B [Nitrosococcus oceani ATCC 19707] gi|207089406|gb|EDZ66678.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus oceani AFC27] Length = 309 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 101/321 (31%), Gaps = 81/321 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G P+ + C+ N RT+SS+ S V+ + PD Sbjct: 5 VLGSGAGGGFPQWNCNCHNCNRLRKGNFKGQARTQSSIAASTNGTDW----VLFNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I ++ DH G+ LR + RP+DVY Sbjct: 61 LGQLQHFPAIQPGRALRDTGIRGIVLLDSQIDHTTGLLMLR----EHHRPLDVYCTESVH 116 Query: 116 KHLFESFRYCFKALDDRT---YPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------Q 166 + L FK L+ + P+ P + G + +P+ Sbjct: 117 QDLTTGNP-LFKVLEHYCTVNWHPLQLPQGDAPGEGFQVEGIEGLRLTPVPLRSEAPPYS 175 Query: 167 QHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 H +G G ++ Y + L ++ D L+ID Sbjct: 176 PHRHNYHVGDTIGLWLEDPATQKSLFYAPGLGQIEDHVLSLMEKADCLLIDGT------- 228 Query: 217 HFSLSESLKKIELINPKNA--------------------------ILTHMHVD---LDYD 247 F + +++ + K A IL H++ LD + Sbjct: 229 -FWTEDEMERAGITQ-KRATEMGHLPQSGQGGMISVLAPLTSPWKILIHINNTNPILDEE 286 Query: 248 MVLKST--PSRVVPAFDGMQF 266 + ++ + + AFDGM Sbjct: 287 SLERAQLEAAGIEVAFDGMDI 307 >gi|89100445|ref|ZP_01173308.1| YhfI [Bacillus sp. NRRL B-14911] gi|89084874|gb|EAR64012.1| YhfI [Bacillus sp. NRRL B-14911] Length = 244 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 33/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + ++VD G ++ + Q +DAV+ +H H DHI I L+ G+ K+ Sbjct: 25 EHNGFRLLVDCGSGVLSKMQQIIQPEELDAVIISHYHPDHIADIGVLQHARLIQGFLGKK 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VYA F L + + E + + G Sbjct: 85 MDTLPVYA--------HRENPQEFSKLSYKD--------ITEGKEYKPDEELNLGPFTIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLH 214 + H RF + Y D + + E L+ + +NG + Sbjct: 129 FLKTDH-PAPCYAMRFEAEGNAIVYTADTS-YKEELAAFASGASLLVSECNFYGNQNGKN 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + ++ + E + +LTH+ + + + Sbjct: 187 AGHMNSYDAGRLAEKAGAEQLVLTHLPHYGELSKLAEE 224 >gi|225848125|ref|YP_002728288.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643649|gb|ACN98699.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 228 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 42/241 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDV 108 +I+D GP +++ + ++ V+ +H H DH+ + + K +D+ Sbjct: 6 GGKNIIIDPGPGSLIRMFERGLEPRDLNVVVLSHRHLDHVADVASVVESATDANKNKLDL 65 Query: 109 YAAPD---------CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 AP +K+ + F+ Y + I I Sbjct: 66 LLAPYDALDGEDPVVLKYTKKGFKRIEIISMKNQY--QLEEITIRP-------------- 109 Query: 160 EAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHSS 216 IP + Q + SL FR+ + Y F + L QN D ++ + + + Sbjct: 110 -LIPHIHQGATVYSLEFRYKDKIFIYVP-CGKFYEDMLYAYPQNPDLMVFNTTFVKPNLN 167 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLD-------YDMVLKSTPSRVVPAFDGMQFS 267 H S E K I+ + PK +LTH +++ + + + T V+ A DGM+ Sbjct: 168 YYHLSAEEVEKIIDKVRPKKVVLTHFSINMLKANPKKVAEGIKERTKVEVMAAHDGMKVE 227 Query: 268 S 268 Sbjct: 228 F 228 >gi|330951963|gb|EGH52223.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae Cit 7] Length = 54 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTG 61 T+LG G + VP AC + RR S I +R ++D+G Sbjct: 1 MRLTLLGTGDARQVPVYGCQCVACAAARADHDLRRLPCSALIECADQRW-----LIDSG 54 >gi|294785517|ref|ZP_06750805.1| metal dependent hydrolase [Fusobacterium sp. 3_1_27] gi|294487231|gb|EFG34593.1| metal dependent hydrolase [Fusobacterium sp. 3_1_27] Length = 260 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEEIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRA-------------GAVKLGEIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H + ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|262201909|ref|YP_003273117.1| beta-lactamase [Gordonia bronchialis DSM 43247] gi|262085256|gb|ACY21224.1| beta-lactamase domain protein [Gordonia bronchialis DSM 43247] Length = 253 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 85/264 (32%), Gaps = 47/264 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S+G P S +S E+ V++D GP Sbjct: 1 MRLTVLGCSGSVGGPGAAC----------------SGYLLSVPGEQP----VLIDCGPGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKHLFE 120 ++ R + AV+ +H HADH + + + +Y P + Sbjct: 41 LGELQRVTDPNNVAVVLSHLHADHCMDLPAMLVWRRYAPQSAVGRAPLYGPPGTAMRI-- 98 Query: 121 SFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +P ++ I + ++ M G + H S+ G R Sbjct: 99 -------GAGSSEFPGQIDDITDTFDVHEWHDGMSVTLGGMTLDAFEVDHPP-STFGLRV 150 Query: 179 -----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH---SSHFSLS--ESLKKIE 228 +A+ D A E ++ + D + +A H LS E+ + Sbjct: 151 TGPAGETLAFSGDT-AMCDELIDLAADADLFLCEASWTHAPSERPPHLHLSGIEAGEAAT 209 Query: 229 LINPKNAILTHMHVDLDYDMVLKS 252 N K LTH+ D D ++ Sbjct: 210 KANVKALALTHIAPWSDVDAIVAE 233 >gi|89092881|ref|ZP_01165833.1| coenzyme PQQ synthesis protein B [Oceanospirillum sp. MED92] gi|89082906|gb|EAR62126.1| coenzyme PQQ synthesis protein B [Oceanospirillum sp. MED92] Length = 306 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 103/316 (32%), Gaps = 70/316 (22%) Query: 9 ILGCGASLGVPRITGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C N RT+SS+ +S E ++ +T PD Sbjct: 5 VLGSAAGGGFPQWNCNCKNCTGVRAGTINAKPRTQSSITVSADGENW----ILFNTSPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I A++Y DH G+ L++ P +++ Sbjct: 61 REQLANFAPMQPNRSIRDTGISAIVYMDSQIDHTTGL-----LMLREGCPHNIWCTEMVE 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK-------SAGGVIEAIPILQQH 168 + L F F L +N I I ND + +A ++ + P H Sbjct: 116 QDLTSGFP-VFNMLKHWNGGNHINRIPIGENDNTFVVPQVPELKLTAIPLLSSAPPYSPH 174 Query: 169 GRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G G + Y + ++ D L++D Sbjct: 175 RDDPHPGDNIGIQIEDTRSGKKLFYAPGLGQIEPHLRPYMEAADVLLVDGTIWQEDELII 234 Query: 210 -----KNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR--- 256 K G+ H L +S ++ ++ + IL H++ ++ + +P Sbjct: 235 TGVGDKLGVAMGH--LPQSGKGGMIEYLDTLEGPRKILIHINNTNP--ILDEDSPEHAEV 290 Query: 257 ----VVPAFDGMQFSS 268 + ++DGM Sbjct: 291 LAHDIEISYDGMSIEL 306 >gi|291527053|emb|CBK92639.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale M104/1] Length = 267 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 85/232 (36%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G + + D +L TH H DHI G+ + ++ Sbjct: 21 DDCHVLIDAGISGKK--IENGLNEFDMTATDMQGILVTHEHIDHIAGLG-----VMARRY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + + + +DD + P V + G IE P+ Sbjct: 74 HIPIYATKATIGAIKCTKS--VGNIDDELFHP-----------VEAGVDFTIGDIEFEPL 120 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +RF N +A TD+ + + KLQNLD L+++A L+ G + Sbjct: 121 HISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTGAY 180 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKS 252 H S S + + + + IL H+ + +Y+ + Sbjct: 181 PYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYE 232 >gi|227488223|ref|ZP_03918539.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091793|gb|EEI27105.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] Length = 255 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 91/286 (31%), Gaps = 53/286 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S+G P SS + + G +++D G Sbjct: 1 MKLTILGCTGSVG-----------SAVGP------SS---GYLLQDGERPAIVMDIGSGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 ++ R + VL++H H+DH L ++ P ++ P+ + Sbjct: 41 MAELERRINPADAHVLFSHLHSDHCADFPSL--LVWRRFHPTHKAEGRHLLFGPPETPER 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + +DD I + V G +E P H I + R Sbjct: 99 MGRLISDDPEGIDD-----ITDTFAFGPWHVGTKEIVEGFTVE--PFHAIH-PIDAYALR 150 Query: 178 FGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKK 226 + +AY D +A + +E ++ D I +A H S E+ Sbjct: 151 LTHRHSGTVLAYSGDSSA-TDDLVECARDADLFICEATWGASSAGKPADMHMSGGEAGDI 209 Query: 227 IELINPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGMQFSS 268 K ++TH+ D + P V+ A G+ Sbjct: 210 ARRAGAKRLLITHIPPWGDREGAVSAAKAEFPGEVLVARPGLSLEL 255 >gi|196230122|ref|ZP_03128985.1| coenzyme PQQ biosynthesis protein B [Chthoniobacter flavus Ellin428] gi|196225719|gb|EDY20226.1| coenzyme PQQ biosynthesis protein B [Chthoniobacter flavus Ellin428] Length = 302 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 97/312 (31%), Gaps = 60/312 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G+P+ C RT+SS+ +S +V+ P Sbjct: 3 IRVRLLGTAAGGGLPQWNCACDNCLAARAGKIPTRTQSSVALSADGRNW----FLVNASP 58 Query: 63 DFYMQVLR----------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D +Q+ + I VL T+ DH+ G+ L++ P+ V A Sbjct: 59 DLRVQMEATPALHPRETSARNSPIAGVLLTNADLDHVLGL-----ILLREGEPLSVLATD 113 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-- 170 + L F+ L + I V E+ + + I G Sbjct: 114 AVRETLTG--PLGFETLLG-GFCGIRWEKVTEDFSTLRLRDGSSSGLAVRTIFLPGGPPR 170 Query: 171 --ISSLGFRFGNVAY------------CTDVNAFPAESLEKLQNLD-------FLIIDAL 209 +S +VAY DV E L+ + F + D L Sbjct: 171 FDKTSTAQSGHSVAYQIRDERGARLLLAPDVAEITPELQGALEESEAVIFDGTFWVADEL 230 Query: 210 KNGLHSS-------HFSLSE-SLKKIELINPKNAILTHMHVD-----LDYDMVLKSTPSR 256 + + H + + SL + + + TH++ +D + Sbjct: 231 RRINPEARTAQQMGHLPIRDGSLDVLRKSPARWKVFTHLNNTNPILAMDSPERTAVLSAG 290 Query: 257 VVPAFDGMQFSS 268 V+ DG++F Sbjct: 291 VLIGEDGLEFEL 302 >gi|195151115|ref|XP_002016493.1| GL11605 [Drosophila persimilis] gi|194110340|gb|EDW32383.1| GL11605 [Drosophila persimilis] Length = 587 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 101/288 (35%), Gaps = 70/288 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+ C P +N SS+ I +E +++D G Sbjct: 307 SSYPRIIFLGTGS-------------CIPNKTRNV---SSILIQTAAE----AFMLLDCG 346 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Y Q++R E + + AV +H HADH G+ GL L+++R + A P Sbjct: 347 EGTYGQIVRLYGSARAVEVLRQLQAVYVSHLHADHHIGLIGL----LRERRQLAPKATPL 402 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + + DR + C S G + + H Sbjct: 403 LLLAPRQIEPWLEFTPPDR------------EIEDAHCTNSFGVSLT---LKAHHDGEPV 447 Query: 174 LGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKK 226 + Y D P + +E +N LI +A +H ++S+++++ Sbjct: 448 ------KITYSGDT--MPCLDLIELGRNSTVLIHEATMEDDLEEEARIKTHSTISQAIQQ 499 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSSP 269 + K+ ILTH Y PS +V AFD MQ + Sbjct: 500 GRNMGAKHTILTHFSQR--YAK-CPRLPSVEDMQQVAIAFDNMQVTLE 544 >gi|257869799|ref|ZP_05649452.1| conserved hypothetical protein [Enterococcus gallinarum EG2] gi|257803963|gb|EEV32785.1| conserved hypothetical protein [Enterococcus gallinarum EG2] Length = 245 Score = 72.5 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGY---FLKQKRP 105 +++D G +Q+ + L++DAV+ +H H DHI + L+ Y F KQ Sbjct: 25 ESEGYHLLLDAGSTTLIQLEKILDPLALDAVILSHYHHDHIADLGVLQYYWQLFPKQAER 84 Query: 106 --IDVYA--------APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +Y M + E Y + +E + Sbjct: 85 NVLPIYGHGEDSIHFNELTMAGVTEGHDY-------------LQTKQLELGPFSVTFM-- 129 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 I + +S G F + D + + ++ ++ D + D N Sbjct: 130 -KTIHPVTCYAMRFVENSTGKIF---VFTGD-SGYLESFVDFAKDADLFLADTYLFAGNE 184 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ ES + K +LTH+ D + + + Sbjct: 185 RHKAHFTSQESGEIAAAAKVKKLVLTHLPQHGDLEQLKEE 224 >gi|291459042|ref|ZP_06598432.1| ribonuclease Z [Oribacterium sp. oral taxon 078 str. F0262] gi|291418296|gb|EFE92015.1| ribonuclease Z [Oribacterium sp. oral taxon 078 str. F0262] Length = 319 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 103/328 (31%), Gaps = 101/328 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P NR +SL + +++++D G Sbjct: 2 LDLCLLGTGGMMPLP---------------NRWL-TSLMLRCSG-----SSLLLDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLF 119 + +RE+ ID +L+TH HADHI G+ G L ++K+ + + K L Sbjct: 41 QI-AMREKGWSPNPIDLILFTHYHADHISGLPGMLLSMGNAERKKELHIIGP----KGLR 95 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + +P +++ + E +P + + + HG IS G+R Sbjct: 96 RVVDGLRVIAPELPFPILLHELTEERPRLPEELTAP---FQVQAFRVNHG-ISCYGYRIS 151 Query: 180 ---------------------------------------------------NVAYCTDVN 188 +V YCTD Sbjct: 152 IPRLGKFDAERARAEGIPLCYWNRLQHGEEIRDRDRIYRPEMVMGKERRGISVVYCTDTR 211 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTH-- 239 P E ++ D I + + + H ++ E+ P+ TH Sbjct: 212 PVP-IIAEMAKDADLFICEGMYGTEDKTDNARRYKHMTMREAAMLAAEAGPRELWFTHYS 270 Query: 240 ---MHVDLDYDMVLKSTPSRVVPAFDGM 264 + + D + K P+ A DG Sbjct: 271 PSELRPEQYRDEIRKIFPA--KFARDGW 296 >gi|167628483|ref|YP_001678982.1| ribonuclease z, putative [Heliobacterium modesticaldum Ice1] gi|167591223|gb|ABZ82971.1| ribonuclease z, putative [Heliobacterium modesticaldum Ice1] Length = 260 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 92/285 (32%), Gaps = 49/285 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T G G L P R + + +VD G Sbjct: 2 FRITFFGTGNGLSYP----------------NRENTFFLVQV------GKAYLVDCGGAP 39 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 + ++++ + D A+L TH H DH +G+ L + +K+ + +Y + + + Sbjct: 40 WPKLVKAGLRPDDLGAILITHGHPDHTYGLPALIQSLWLAGRKKLLPIYFPAG-ARGIVQ 98 Query: 121 SFRYCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F+ +P +E + G + HG I ++G F Sbjct: 99 GLLDLFELTTKPNMFPIAFREQPLEERETEALQD---GSLTVSTFPAIHG-IPTMGVSFL 154 Query: 180 N------------VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKK 226 + V Y D P L+ LI + + H SL + + Sbjct: 155 DESKEGLEKSPIKVVYSADTAYNPLLETVALEAT-CLIHECNGADKAAGKHSSLHDVARL 213 Query: 227 IELINPKNAILTHMHVDLDYDMVLKST---PSRVVPAFDGMQFSS 268 ++ NPK + H+ Y+ ++ R + A DGM Sbjct: 214 MKKTNPKQVAIVHLTEGEGYERLMAQYGLAQPRFMIAEDGMSIRV 258 >gi|229488695|ref|ZP_04382561.1| cobalbumin biosynthesis protein [Rhodococcus erythropolis SK121] gi|229324199|gb|EEN89954.1| cobalbumin biosynthesis protein [Rhodococcus erythropolis SK121] Length = 440 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 51/273 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA+ G P +C SS I + + +++D GP+ Sbjct: 1 MELVMLGTGAADGWPNPFCTCPSCLAAL-------SSETIRGHTAALVDNRILLDCGPEV 53 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 R + ++ +L TH H DH+ + L + + P+ V PD + + Sbjct: 54 PRAASRFGCTLAHVEHILLTHSHPDHLGPMALLFRSWASRTEPLQVLGPPDALALCRD-- 111 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + +P+ + + G + H +++L + + + Sbjct: 112 -----------WVGPDDPVTFTPLETGQSIML--GTYRVRTLEAAH-EVTTLLYDITDAS 157 Query: 183 -----YCTDVNAFPAESLEKLQNLDFLIIDALKNGL---HSS-----HFSLSESLKKIEL 229 + TD P +++ L + F DA+ H + H L + + Sbjct: 158 GTRIFWATDTGPLPESTVDALADARF---DAVFLEETFGHKTDHGTGHHDLPSFAETVSR 214 Query: 230 IN-----PKNA--ILTHMHVDLDYDMVLKSTPS 255 + + H+ ++ V Sbjct: 215 LRNCDAITDRTDVVAVHLGH---HNPVENELSE 244 >gi|212695921|ref|ZP_03304049.1| hypothetical protein ANHYDRO_00454 [Anaerococcus hydrogenalis DSM 7454] gi|212677044|gb|EEB36651.1| hypothetical protein ANHYDRO_00454 [Anaerococcus hydrogenalis DSM 7454] Length = 274 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 77/246 (31%), Gaps = 56/246 (22%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ + + +++D G + Q + E+ +DA+ TH H DH+ G Sbjct: 26 SVFVEHKGSK-----ILIDCGFSGRKIENLLSQ-IDEKPSDLDAIFLTHEHMDHVKG--- 76 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + ++ I +YA ++ + I+ + Sbjct: 77 --AGVISRRYDIPIYANKGTWLSFIKN-------------AGKLKEENIKIFRSNSFLNF 121 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI----- 205 + PI H +GF + TD L +++ D Sbjct: 122 --NSFDIFPISIHHDANEPVGFILYLDNKKITVLTDTGIIDDRILNEIKGSDVYYFEANH 179 Query: 206 -IDALKNGLHS-----------SHFSLSESLK-KIELINPK--NAILTHMHVDLDYDMVL 250 +DALK G ++ H S +S K + + K L H+ + + + Sbjct: 180 DLDALKRGPYTYPMKVRIMGKMGHLSNDQSAKILADALQGKNEKIFLAHLSETNNSEELC 239 Query: 251 KSTPSR 256 K T Sbjct: 240 KITVDN 245 >gi|254173713|ref|ZP_04880385.1| ribonuclease Z [Thermococcus sp. AM4] gi|214032405|gb|EEB73235.1| ribonuclease Z [Thermococcus sp. AM4] Length = 314 Score = 72.5 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 37/178 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G G+ PT +N + ++ R + ++ D G Sbjct: 2 LQVIFLGTG---GI----------MPTRERN--------VPAIALRYNGEVILFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ ++ + TH H DH G+ GL +++P+ +Y + + + Sbjct: 41 IRQMNTAKLSPMKVEKIFITHFHGDHYLGLGGLIQTMNLWNREKPLHIYGPKYTFEFV-Q 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +F ++ + P+ + V E + + K E +HG I +LG+ F Sbjct: 100 NF------INSGFFRPVFDIHVHELGETRLKFKGY----EIWSFKVEHG-IPALGYVF 146 >gi|254725527|ref|ZP_05187309.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] Length = 244 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 75/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H R++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-RVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|229028873|ref|ZP_04184974.1| Beta-lactamase domain protein [Bacillus cereus AH1271] gi|228732444|gb|EEL83325.1| Beta-lactamase domain protein [Bacillus cereus AH1271] Length = 244 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EQDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|92112973|ref|YP_572901.1| pyrroloquinoline quinone biosynthesis protein PqqB [Chromohalobacter salexigens DSM 3043] gi|91796063|gb|ABE58202.1| Coenzyme PQQ biosynthesis protein B [Chromohalobacter salexigens DSM 3043] Length = 299 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 106/305 (34%), Gaps = 57/305 (18%) Query: 9 ILGCGASLGVPRITGDWGACD---PTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G+P+ C +P+ RT+SSL +S + +++ P+ Sbjct: 5 VLGAAAGGGLPQWNCRCDVCRLAWAGDPRVTPRTQSSLAVSADGRSWA----LINCAPEV 60 Query: 65 YMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ R+ I ++L T+ DH+ G+ L++ P ++A P+ Sbjct: 61 LTQIRGTPALFPRQGKRDTPIASILLTNGDVDHVGGL-----LSLRESSPYRLHATPEIH 115 Query: 116 KHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L +S F +R + + + G A+ + + I S Sbjct: 116 AALRDSPVFNVLAPDHVERVEVALEETLTLAEGLEARIFAVPGKA--ALYLEGEDPDIGS 173 Query: 174 LG-------FRFG--NVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKNGL-HS 215 G FR G Y A +L+ D L+ D ++ G+ H Sbjct: 174 EGEATVGVEFRVGARRAYYIPGCAAMNERLAARLEGADLLLFDGTLWRDDEMIRAGVGHK 233 Query: 216 S-----HFSLS---ESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFD 262 + H S+S S+ + +N + H++ D ++ A D Sbjct: 234 TGSRMGHMSMSGETGSMAALSSLNIGRRVFVHINNTNPVLIDDSPERREARRHGWEIAHD 293 Query: 263 GMQFS 267 GM+ Sbjct: 294 GMELE 298 >gi|169628574|ref|YP_001702223.1| hypothetical protein MAB_1483 [Mycobacterium abscessus ATCC 19977] gi|169240541|emb|CAM61569.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 253 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 85/275 (30%), Gaps = 51/275 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S + + +++D G Sbjct: 1 MRVTVLGCSGS----VTGPDSPA-------------SGYLLTAPDAPP---LVIDFGGGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV------YAAPDCMKHL 118 + R +VL +H HADH + GL + ++ P Y D + + Sbjct: 41 LGSLQRFADPGSVSVLLSHLHADHCLDLPGL--FVWRRYHPNPPKGKAIMYGPADTLVRV 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + +DD T + + G + P H S G R Sbjct: 99 GAASAEIGGEVDDFT-------DIFDVFPWADGEPVQFGSLTVTPTRVAHPP-ESYGLRI 150 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALK-----NGLHSSHFSLSESLKKIE 228 + +AY D ++ + D + +A + H S +E+ + Sbjct: 151 EDSSGTVLAYSGDT-GICDAVVDLARGADVFLCEASWTHMPGHRPPDLHLSGTEAGQIAT 209 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 K +LTH+ + V+ S AFDG Sbjct: 210 RAGVKELLLTHIPPWTSREDVIAEAKS----AFDG 240 >gi|152970362|ref|YP_001335471.1| pyrroloquinoline quinone biosynthesis protein PqqB [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|262044462|ref|ZP_06017521.1| coenzyme PQQ synthesis protein B [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166989870|sp|A6T9H0|PQQB_KLEP7 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|150955211|gb|ABR77241.1| Pyrroloquinolinquinone Synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|259038192|gb|EEW39404.1| coenzyme PQQ synthesis protein B [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 308 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 98/315 (31%), Gaps = 71/315 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C ++ RT+SS+ +S + V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCANCQ--GLRDGTIQAAPRTQSSIIVSDNGKEW----VLCNASP 58 Query: 63 DFYMQVL------REQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + V I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQIAHTPELNKAGVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F F L R + + I A+PI S Sbjct: 114 VHEDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSP 170 Query: 174 LGFR---FGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 R NVA Y + L LQ D L+ID Sbjct: 171 YRDRPLPGHNVALFIENRRNGQTLFYAPGLGEPDEALLPWLQKADCLLIDGTVWQDDELQ 230 Query: 210 ------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP------ 254 G H +L + + + + K IL H++ ++ + +P Sbjct: 231 AAGVGRNTGRDMGHLALGDEHGMMALLASLPAKRKILIHINNTNP--ILNEQSPQRQALT 288 Query: 255 -SRVVPAFDGMQFSS 268 + ++DGM + Sbjct: 289 QQGIEVSWDGMAITL 303 >gi|71907329|ref|YP_284916.1| pyrroloquinoline quinone biosynthesis protein PqqB [Dechloromonas aromatica RCB] gi|71846950|gb|AAZ46446.1| Coenzyme PQQ biosynthesis protein B [Dechloromonas aromatica RCB] Length = 305 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 102/320 (31%), Gaps = 71/320 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 +LG GA G P+ C P RT+SS+ +S + V+ Sbjct: 1 MKIRVLGAGAGGGFPQWNCACRNCQGVRDGSISALP---RTQSSIAVSPDGKDW----VL 53 Query: 58 VDTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 V+ PD Q+ S I +++ DH G+ LR + ++ + Sbjct: 54 VNASPDILQQLRAFPAASPGPALRGSPIKSIVLADAQIDHTTGLYMLREHNVRW----PI 109 Query: 109 YAAPDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +AA + L YC +D R P P E + A Sbjct: 110 WAAAPVHEDLTRGNPILALLDHYC--GVDWRNLPFDGRPFAPEGSAQLKWFALPLSS--A 165 Query: 162 IPILQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 P H + G G V Y + + +++ D +++D Sbjct: 166 APPYSPHRNAPAAGDNIGLTVIDPNSGGRVFYAPGLAEISSSVQAQMEAADCVLVDGTFW 225 Query: 209 -----------LKNGLHSSHFSLSESLKKIELIN--PKNA--ILTHMHVD---LDYDMVL 250 K H + S S IE + P IL H++ LD + Sbjct: 226 TDDEMIQLGISSKRSSDIGHLAQSGSGGMIEHLGRLPARTRRILIHINNTNPILDENSRE 285 Query: 251 KST--PSRVVPAFDGMQFSS 268 ++ + + AFDGM+ + Sbjct: 286 RAILDAAGIEVAFDGMEINL 305 >gi|260494442|ref|ZP_05814572.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_33] gi|260197604|gb|EEW95121.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_33] Length = 260 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ K ++ +I D + ++ P Sbjct: 75 PIYITPESYKV-------------GAIKLGEIDKSLINFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H + ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAVRTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCQYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|229143795|ref|ZP_04272215.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST24] gi|228639670|gb|EEK96080.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST24] Length = 244 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 75/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGTFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|323705909|ref|ZP_08117480.1| hypothetical protein ThexyDRAFT_1772 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534707|gb|EGB24487.1| hypothetical protein ThexyDRAFT_1772 [Thermoanaerobacterium xylanolyticum LX-11] Length = 303 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 95/328 (28%), Gaps = 101/328 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 + +LG G + VP R SSL + +++VD G Sbjct: 2 FDVCLLGTGGMMPVP----------------GRNLSSLILRY-----GGVSILVDCGEGT 40 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 +Q L L+ID + +TH HADHI G+ G+ + ++K +++ + L Sbjct: 41 QVPLQKLGWGFLNIDTIFFTHYHADHIMGLPGIIYQMINQERKNKLNLMGPEG-IDVLKN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 F + P IE ++ G I ++ QH + + F Sbjct: 100 LLNVLFVEI----------PFEIEYTELKDGYSLNVGEITVKNVVVQHTSL-CFAYSFEV 148 Query: 180 ---------------------------------------------------NVAYCTDVN 188 V+Y TD Sbjct: 149 KRLPKFDAKKARELNIPLEYWHRLQHGESIIKDGSVIFTPQMVLGEDRKGLKVSYSTDTR 208 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMH 241 + ++ +N D I + + H + E+ + N K LTH Sbjct: 209 P-TKDLIKIAENSDLFIGEGMYGDPLDEEKAIKKYHSTFLETALVAKEANVKELWLTHFS 267 Query: 242 VDL----DYDMVLKSTPSRVVPAFDGMQ 265 L Y K V +D M Sbjct: 268 PSLKNPDKYLKYAKDVFENSVVGYDMMT 295 >gi|312142733|ref|YP_003994179.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] gi|311903384|gb|ADQ13825.1| beta-lactamase domain protein [Halanaerobium sp. 'sapolanicus'] Length = 277 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 55/167 (32%), Gaps = 31/167 (18%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +V++D G + M L SIDA+L TH H DHI G+ L ++ Sbjct: 20 RAGKFSVLIDAGLSGKELERRMNSLGIDPTSIDALLITHEHNDHIKGVG-----VLSRRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I ++A + K N G + IP Sbjct: 75 NIPIFANQGTWSGAEKKLGKIKK-----------------ENRRVFKGDFMIGDLGFIPY 117 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 H +G+ + TD AE+ KL+ D I++ Sbjct: 118 QVSHDAEDPVGYICRAADKKIVLATDTGVLAAETAAKLKGADLFILE 164 >gi|148242938|ref|YP_001228095.1| ribonuclease Z [Synechococcus sp. RCC307] gi|147851248|emb|CAK28742.1| Ribonuclease Z [Synechococcus sp. RCC307] Length = 333 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 86/301 (28%), Gaps = 90/301 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 15 LQVTFLGT--SSGVPS---------------RSRNVSAVALRLPQRADL--WLFDCGEAT 55 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR +V + + TH H DH+ G+ GL +D+Y + Sbjct: 56 QHQFLRSELRVSQLRRIFITHMHGDHVFGLPGLLASLGMAGTCDGVDLYGPEPLEAFVLS 115 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 + ++ + YP + +E+ G +H R+ + G+R Sbjct: 116 ALQH---SATRIGYP--LRFHPVESAANSGEPLLIDGEFSVCCAPLKH-RVPAFGYRVQQ 169 Query: 180 -------NVA----------------------------------------------YCTD 186 ++A YCTD Sbjct: 170 SERPGRFDIAKAKAMRLPPGPEFARLKAGETVTFADGRRIDGRELCGPRQPGCSVVYCTD 229 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHM 240 F ++ Q D LI +A + ++ H + + + + + LTH+ Sbjct: 230 TV-FSERAVALAQGADLLIHEATFSHRDAAMAYQRQHSTSTMAAQTAAEAGVQQLALTHL 288 Query: 241 H 241 Sbjct: 289 S 289 >gi|16329358|ref|NP_440086.1| hypothetical protein sll1036 [Synechocystis sp. PCC 6803] gi|1651839|dbj|BAA16766.1| sll1036 [Synechocystis sp. PCC 6803] Length = 292 Score = 72.1 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 78/227 (34%), Gaps = 44/227 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAV----LYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G +L + + S ++V +TH H DHI G +F RP + Sbjct: 36 GRERLIFDAGTGIK--MLGDSLSSQESVSADIFFTHSHWDHIQGF----PFFTPAFRPGN 89 Query: 108 ---VYA----APDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 VY ++ L E + P ++ D+ + G I Sbjct: 90 FFRVYGVPTPDGTTIEQRLHEQM-----LHPNFPVPLQTMQGIVAFYDLEVGEDVVIGNI 144 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAE----SLEKLQNLDFLIIDALKN 211 E H ++G+R VA+ TD FP L QN D LIIDA Sbjct: 145 ELQTRPLNHPG-EAMGYRVTWQGITVAFITDTEHFPDRLDDNVLALAQNADVLIIDATYT 203 Query: 212 ----------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + H + E++K + + IL H D +D Sbjct: 204 DEEYYDRQMSKVGWGHSTWQEAVKVAQAARVRQLIL--FHHDPGHDD 248 >gi|261350457|ref|ZP_05975874.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288861240|gb|EFC93538.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 306 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 91/284 (32%), Gaps = 51/284 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T LG G G + A RR +I + + VD GP Sbjct: 1 MKITFLGTG--------GGRFSA-----ISQRRMTGGFRIDNL----NGKNYHVDPGPGA 43 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-----VYAAPDCMKH 117 ++D V +H H DH + R + V + Sbjct: 44 LVRTYQFGFDPRNLDGVFVSHAHTDHYN---DAEILIEAMTRGMTKEYGVVLGNKSVLDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 K + ++ P +EN + G ++ HG +GF+ Sbjct: 101 YERWGPGISKYHQSHSKKYVLEPNQVENIN--------GCSVKGT--KTVHGDPEGVGFQ 150 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELIN 231 ++Y +D F + + + D LI L+ G H ++ ++ + Sbjct: 151 IDYRGFKISYTSDTGYF-EDLHKYHEGADILIASVLRPGNKSIRGHLCSRNFIELLKEVK 209 Query: 232 PKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 PK AI+TH + + + + K + + + AFDGM F Sbjct: 210 PKLAIMTHFGLKMLSIDPIDEAKRITKESGVKTLAAFDGMSFEV 253 >gi|157691749|ref|YP_001486211.1| metal-dependent hydrolase [Bacillus pumilus SAFR-032] gi|157680507|gb|ABV61651.1| possible metal-dependent hydrolase [Bacillus pumilus SAFR-032] Length = 247 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 79/237 (33%), Gaps = 37/237 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG---YFLKQKR- 104 ++VD G ++ + + +DAVL +H H DHI I L+ + Sbjct: 25 ESDGFRLLVDCGSGVLSKLQQYIDIEELDAVLLSHYHHDHIADIGPLQYAKLVGYHLGKS 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y + + I + + + G + Sbjct: 85 SGPLPIYG----------------HTGNQEAFGRIADDVHTKAKAYQPKEGIQIGPFQIN 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID----ALKNGLH 214 + H R V Y D +++ + ++ D LI + A ++G Sbjct: 129 FLKTVH-PAECYAMRIQAKDAVVVYTAD-SSYQEAFVPFSKDADLLIAESNFYAGQDGSS 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 + H + +E K N I+TH+ + ++ + + A G++++ Sbjct: 187 AGHMNSTEVGKLAMEANVGELIITHLPHFGRHKDLVNEAQALYTGNIQLAHSGLRWN 243 >gi|146302971|ref|YP_001190287.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701221|gb|ABP94363.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348] Length = 228 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 94/273 (34%), Gaps = 54/273 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA +RR ++ + + G +++D G Sbjct: 1 MKITFLGTGAGS---------------TAGSRRFKAGILVE-----GKEGKIVLDFGSGI 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLFES 121 M++ +V+ DAV TH H DH GI +Q + V++ P + L Sbjct: 41 NMRLEDMRVVP-DAVFITHLHIDHFSGIFDH--LVRRQIDRVPELKVFSPPGFSEVLR-- 95 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + ++ + G +E + H +I ++ + + Sbjct: 96 ----VYQKTNNISAQVMEDHLPS---------GKIGDLEVYSLEACH-KIYAVSYIITDG 141 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLI--IDALKNGLHSSHFSLSESLKKIELINPKNA 235 V Y D L ++ +D +I L+N H S+ E++ NP Sbjct: 142 KRRVLYSGDTLEPCDTVLREISGVDLVIHEASCLENCKEWGHTSVKEAINLFR--NP--- 196 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTH+ L+ V S + + A DG+ Sbjct: 197 VLTHVPAQLE-GEVENSVKGKALLAKDGLSLDV 228 >gi|307182195|gb|EFN69529.1| Ribonuclease Z, mitochondrial [Camponotus floridanus] Length = 769 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 74/305 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+Y +LG G+S+ P R S + + N ++++D G Sbjct: 460 KEYPKIIMLGTGSSI----------------PSKVRNTSGILLRM----DQNHSMLLDCG 499 Query: 62 PDFYMQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---DVYA 110 + Q+ + + + +I AV +HPHADH G+ FLK+++ I +Y Sbjct: 500 EGTFGQIAKIYGKYKMDKIIKTIKAVYISHPHADHHIGL----IGFLKERKKITQDPLYL 555 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVN-PIVIENNDVPICMKSA--------GGVIEA 161 ++ + + PI++ +I NN+ + + + Sbjct: 556 FAPTYIAMWLRLYHM-------RFEPILHQMTLIPNNEFFMDVHEPTEHKYKSMYKTLNV 608 Query: 162 IPILQQHGRISSLGFRF-------GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGL 213 + + + + F + Y D P E+L KL Q+ D LI +A Sbjct: 609 QAVKTTYVKHCAHSFGISVTLNNGKKIVYSGDT--MPCENLVKLGQDCDLLIHEATMEDD 666 Query: 214 HSS------HFSLSESLKKIELINPKNAILTHMHVD------LDYDMVLKSTPSRVVPAF 261 + H + S++++ E + K +LTH L D + V A+ Sbjct: 667 LAKEAKMKLHSTTSQAIRAGEQMRSKFTLLTHFSQRYSVIPPLPNDDNGSKL-NNVGIAY 725 Query: 262 DGMQF 266 D M Sbjct: 726 DNMHI 730 >gi|254415615|ref|ZP_05029374.1| ribonuclease Z [Microcoleus chthonoplastes PCC 7420] gi|196177565|gb|EDX72570.1| ribonuclease Z [Microcoleus chthonoplastes PCC 7420] Length = 319 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVTLRLPQRAEF--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR ++ + + TH H DHI G+ GL +D+Y P ++L Sbjct: 42 QHQLLRSELKTSQLRRIFITHLHGDHIFGLMGLLASCGLAGNVDRVDIYGPPGLNEYLKA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +Y T V+P +I ++ + A +H R+++ G+R Sbjct: 102 CGKYSHTRFSFPTQVHTVSPGIIYEDEEYTVICGA----------LKH-RVTAFGYRI 148 >gi|296328872|ref|ZP_06871383.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153993|gb|EFG94800.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 260 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRAGAAKLG-------------QIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNRKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|256845178|ref|ZP_05550636.1| metal dependent hydrolase [Fusobacterium sp. 3_1_36A2] gi|256718737|gb|EEU32292.1| metal dependent hydrolase [Fusobacterium sp. 3_1_36A2] Length = 260 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRAGAAKLG-------------QIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNRKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|330010614|ref|ZP_08306840.1| coenzyme PQQ biosynthesis protein B [Klebsiella sp. MS 92-3] gi|328534439|gb|EGF61034.1| coenzyme PQQ biosynthesis protein B [Klebsiella sp. MS 92-3] Length = 308 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 100/316 (31%), Gaps = 73/316 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C ++ RT+SS+ +S + V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCANCQ--GLRDGTIQAAPRTQSSIIVSDNGKEW----VLCNASP 58 Query: 63 DFYMQVL------REQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + V I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQIANTPELNKAGVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F F L R + + I A+PI S Sbjct: 114 VHEDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSP 170 Query: 174 LGFR---FGNVA-------------YCTDVNAFPAES-LEKLQNLDFLIIDAL------- 209 R NVA Y P E+ L LQ D L+ID Sbjct: 171 YRDRPLPGHNVALFIENRRNGQTLFYAP-GLGEPDETLLPWLQKADCLLIDGTVWQDDEL 229 Query: 210 -------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP----- 254 G H +L + + + + K IL H++ ++ + +P Sbjct: 230 QAAGVGRNTGRDMGHLALGDEHGMMALLASLPAKRKILIHINNTNP--ILNEQSPQRQAL 287 Query: 255 --SRVVPAFDGMQFSS 268 + ++DGM + Sbjct: 288 TQQGIEVSWDGMAITL 303 >gi|108759389|ref|YP_628931.1| ribonuclease Z [Myxococcus xanthus DK 1622] gi|122981353|sp|Q1DEJ2|RNZ_MYXXD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|108463269|gb|ABF88454.1| ribonuclease Z [Myxococcus xanthus DK 1622] Length = 307 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 109/346 (31%), Gaps = 124/346 (35%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ PT +N +S ++ + + ++ D G Sbjct: 4 LRLTFLGTSAAQ-------------PTLHRN--------LSGLAVKAHSDLLLFDCGEGS 42 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQK-----RPIDVYAAPDCMKHL 118 Q++R ++DAV +TH HADH GI G+ PI +Y P + L Sbjct: 43 QRQMVRYGTGFTVDAVFFTHFHADHYLGI---IGFLRTLGMTGRSEPIHLYGPPSAKRLL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 ++ ++ ++P V +++ DV + G + A+ + RI++LG+ Sbjct: 100 HQA---VHLGVESMSFP--VEIHELKDGDV---VPRKGYAVHAVGVDH---RINALGYAL 148 Query: 177 -------RFG---------------------------------------------NVAYC 184 RF + Sbjct: 149 VEDDRPGRFNLDVARSLGVPEGPSFGKLQRGEPVTLEDGRTVKPEDVLGAPRPGRRLVIS 208 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE--------------SLKKIELI 230 D PA ++ ++ D L+ H S FS E + + Sbjct: 209 GDTRPCPAL-VKAAKDADLLV--------HESTFSDDEQERAVETRHSTAREAARVAREA 259 Query: 231 NPKNAILTHMH--VDLDYDMVLKSTPSR----VVPAFDGMQFSSPI 270 + +LTH+ D D +L V AFDG P+ Sbjct: 260 GARRLVLTHLSSRHDTDPSKLLTQAREEYQGPVEVAFDGFTVELPL 305 >gi|130799|sp|P27504|PQQB_KLEPN RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|43906|emb|CAA41580.1| pqqB [Klebsiella pneumoniae] Length = 308 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 100/316 (31%), Gaps = 73/316 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C ++ RT+SS+ +S + V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCANCQ--GLRDGTIQAAPRTQSSIIVSDNGKEW----VLCNASP 58 Query: 63 DFYMQVL------REQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + V I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQIAHTPELNKAGVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F F L R + + I A+PI S Sbjct: 114 VHEDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSP 170 Query: 174 LGFR---FGNVA-------------YCTDVNAFPAES-LEKLQNLDFLIIDAL------- 209 R NVA Y P E+ L LQ D L+ID Sbjct: 171 YRDRPLPGHNVALFIENRRNGQTLFYAP-GLGEPDETLLPWLQKADCLLIDGTVWQDDEL 229 Query: 210 -------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP----- 254 G H +L + + + + K IL H++ ++ K +P Sbjct: 230 QAAGVGRNTGRDMGHLALGDEHGMMALLASLPAKRKILIHINNTNP--ILNKQSPQRQAL 287 Query: 255 --SRVVPAFDGMQFSS 268 + ++DGM + Sbjct: 288 TQQGIEVSWDGMAITL 303 >gi|311744099|ref|ZP_07717905.1| bifunctional cobalamin biosynthesis protein CobU [Aeromicrobium marinum DSM 15272] gi|311313229|gb|EFQ83140.1| bifunctional cobalamin biosynthesis protein CobU [Aeromicrobium marinum DSM 15272] Length = 266 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 90/281 (32%), Gaps = 33/281 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G++ G P AC R S + S + TV++D GP Sbjct: 1 MEVVLLGTGSADGWPNAFCRCDACTTA-------RVSGIVRGQSSAMVDGTVLLDLGPGV 53 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRPIDVYAAPDCMKHLFES 121 +R + + VL TH HADH+ + P+DV + + Sbjct: 54 GDAAVRLGRSLAGLRHVLVTHAHADHLA--PEQLLFRSWVADAPLDVVGPAAVVDACRD- 110 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + P+V ++ + + A + + S G R + Sbjct: 111 ---WVAPDAAVRFRPVVAGDELDLGGHAVRVLPAAHRVFLDGDAVLYDVTSPSGHR---L 164 Query: 182 AYCTDVNAFPAESLEKLQNL--DFLII-----DALKNGLHSSHF-SLSESLKKIELIN-- 231 + D P + +++ D +++ DA G H S +E++ + Sbjct: 165 LWGCDTGPLPPDWFDRVAGARFDVVLLEETFGDAHHLGAGHLHLGSFAETVAALRECGAV 224 Query: 232 --PKNAILTHM-HVDLDYDMVLKSTPS-RVVPAFDGMQFSS 268 + H+ H + +++ P DG + Sbjct: 225 HDATEVVAVHLSHHNPPESELVRRLAGCGARPGRDGDVITL 265 >gi|301345074|ref|ZP_07225815.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acinetobacter baumannii AB056] Length = 288 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 94/295 (31%), Gaps = 57/295 (19%) Query: 22 TGDWGACD--PTNPKNR--RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-- 75 + C T N RT+SS+ IS ++++ PD Q+ + Sbjct: 3 NCNCPNCHGVRTGTINAKVRTQSSIAISENGVDW----ILLNASPDIRQQLFDFKAAQPA 58 Query: 76 -------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR--YCF 126 I V+ DH G+ L++ PI+V+ + L F Sbjct: 59 RKLRDTGITNVILMDSQLDHTTGL-----LTLREGCPINVWCTEMVYQDLTTGFPVFNML 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQHGRISSLGFRF------- 178 K + ++P D ++ +I+ A P H G Sbjct: 114 KHWNGGLLYHQIDPKQAFKIDGFENLEFLPLIIQSAAPPYSPHRHDPHEGDNIALIIKDH 173 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------------KNGLHSSHFSLS 221 + Y + + ++ +Q+ D ++ID K G H +S Sbjct: 174 KTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQTGVGKKTGREMGHLYIS 233 Query: 222 ---ESLKKIELINPKNAILTHMHVD---LDYDMVL-KSTPSR-VVPAFDGMQFSS 268 SL + ++ +L H++ L+ D + V AFDGMQ Sbjct: 234 GEGGSLSYLNQLSTPKKVLIHINNTNPILNEDSAQFAELKANDVEVAFDGMQIEL 288 >gi|302789764|ref|XP_002976650.1| hypothetical protein SELMODRAFT_416540 [Selaginella moellendorffii] gi|300155688|gb|EFJ22319.1| hypothetical protein SELMODRAFT_416540 [Selaginella moellendorffii] Length = 731 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 98/295 (33%), Gaps = 57/295 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D + G G P R S + + +++D G Sbjct: 402 SDDFEVQFFGTG----------------SAEPSKYRGSSGVLLRLRGS----AAMLLDAG 441 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAP 112 Q+ R E V SI+ + +H HADH+ G + ++ +P+ V + Sbjct: 442 EGVLGQIFRSYGEAKALEAVNSIECLWLSHKHADHVLGAVAIVCSQARERTKPLLVIGST 501 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE------AIPILQ 166 +K L E A +P + V+ + + G V+E + Sbjct: 502 AVVKWLTE----VCNAHAQSGFP--LPAFVVMHFEEFEGSHHLGRVLETLQLKSIASVPV 555 Query: 167 QHGR----ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLHSS- 216 H + G ++ Y D ++ LI D L++ Sbjct: 556 NHCYEAYGLVLHGQTGWHLVYSGDTRP-SDRLIQAGAGCTLLIHEATFEDCLESHARKKR 614 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK---STPSRVVPAFDGMQFSS 268 H ++SE+L+ + + ILTH Y V++ ++ AFDGM +S Sbjct: 615 HCTVSEALQVGSRMQAEQVILTHFSQR--YPKVVEIDVTSYPNACVAFDGMVVTS 667 >gi|125624634|ref|YP_001033117.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|124493442|emb|CAL98416.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|300071425|gb|ADJ60825.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris NZ9000] Length = 250 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 76/226 (33%), Gaps = 36/226 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL--- 100 S + + S +++D G ++ E Q +DAV+ +H H DHI + LR Y Sbjct: 21 SYLLQSESGFNMLLDCGSRAVTELEHELQPTQLDAVILSHYHEDHIADLGALRQYRQLYP 80 Query: 101 -----KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +Y + Y F L+ E + + + Sbjct: 81 LGQDGWDGMMLPIYGHGE--------NEYEFSKLNLDKVS--------EGHLYDVENGTK 124 Query: 156 GGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H ++ R + Y D F + E + D L+ D Sbjct: 125 VGPFDITFLKTVHPVVN-YAMRIVERRTGQVLVYTGDTGYFDELT-EFAKEADILLADVY 182 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +H S E+ + + K ILTH+ D D++L Sbjct: 183 FFKDKAKMPNHLSSIEAGQIAKEAKVKKLILTHLPQFGDLDILLTE 228 >gi|326803491|ref|YP_004321309.1| ribonuclease Z [Aerococcus urinae ACS-120-V-Col10a] gi|326650406|gb|AEA00589.1| ribonuclease Z [Aerococcus urinae ACS-120-V-Col10a] Length = 307 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 88/299 (29%), Gaps = 88/299 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA GVP R S + + ER + D G Sbjct: 1 MELTFLGTGA--GVPS--------------KARNVSCTLLKLLDERNEM--WMFDCGEGS 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q L+ + + + +H H DH++G+ G R + + P+ +Y K++ Sbjct: 43 QQQFLKTTLKPRKVTKIFISHVHGDHMYGLPGFLSSRSFQGGENVPLTIYGPKGVKKYVQ 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA------------------------ 155 S L Y ++ I D +K A Sbjct: 103 TSLGISKTRLTYPIYYQELDQSGIAFKDQQFTVKYATLDHIVPSYGFRVEEADSAGELLI 162 Query: 156 -------------------GGVIEAIPILQQHGRISSLG--------FRFGNVAYCTDVN 188 G I+ + HG+ LG +G+ YC Sbjct: 163 DKAREAGVPNGPLLGKLKAGLTIQLEDGRELHGK-DFLGPDKQGKIVSIYGDTRYC---- 217 Query: 189 AFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ QN D L+ +A K H + S++ + K LTH+ Sbjct: 218 ---QAGIDLAQNADVLVHEATFEAGEEKMAHDYYHSTASQAAMVAKKAGAKQLYLTHIS 273 >gi|328541983|ref|YP_004302092.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Polymorphum gilvum SL003B-26A1] gi|326411733|gb|ADZ68796.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Polymorphum gilvum SL003B-26A1] Length = 311 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 98/327 (29%), Gaps = 79/327 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + + RT+SS+ S + Sbjct: 1 MKIRVLGSAAGGGFPQWNCNAPLSRAVREQRPGFLARTQSSVAASADGTSWAIFN----A 56 Query: 61 GPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 PD Q+ LR I AV+ T+ DHI G+ L++ P Sbjct: 57 SPDIRQQIAATPDLNPRPDGPLRH--SPIKAVVLTNADVDHIAGL-----LSLREGTPFV 109 Query: 108 VYAAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +YA+ + L + F A+ +R P+ +E D P+ G +E P+ Sbjct: 110 IYASERVLATLAANSVFNVLTPAVVERRVLPLDGVTDLEGPDGPL-----GLSVETFPVP 164 Query: 166 QQH------------------GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDF 203 + G L R G + Y A P +L Sbjct: 165 GKVALFLEDEGAADGRFGSAPGDTIGLALRSGGAPQTIFYIPGCAAVPDALKARLAGAAC 224 Query: 204 LIID--------------ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDY 246 L+ D K G H ++S SL + I+ I H++ Sbjct: 225 LLFDGTVYTDTEMPDAGVGSKTGTRMGHMAISGPAGSLAALAGIDVGRKIYVHINNTNPI 284 Query: 247 -----DMVLKSTPSRVVPAFDGMQFSS 268 T S +DGM+ Sbjct: 285 LMPGSAAERAVTASGWEIGYDGMELEL 311 >gi|325265071|ref|ZP_08131798.1| VicX protein [Clostridium sp. D5] gi|324029761|gb|EGB91049.1| VicX protein [Clostridium sp. D5] Length = 265 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VDTG D ++ L + +D +L TH H+DHI G+ +K + Sbjct: 20 DHTHLLVDTGISKKKIDAGLKELEIKGEELDGILITHEHSDHIQGLG-----VFSRKYEV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA P ++ + Y P+ + + G I P Sbjct: 75 PIYATPGTIEGIEN-------------YAPLGKMPEGLLHPIHTDESFMLGDIMIDPFRI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H G+R VA TD+ + ++EKL++LD ++++A H H Sbjct: 122 SHDAREPSGYRMNCGGKAVAVATDLGIYDDYTVEKLKDLDAVLLEA----NHDIHM 173 >gi|303242716|ref|ZP_07329187.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] gi|302589727|gb|EFL59504.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] Length = 244 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 81/224 (36%), Gaps = 29/224 (12%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR-GYFLKQKR----- 104 + +++D G + + ++ +DA++ TH H+DH+ + LR +K R Sbjct: 27 GDKKILIDCGNGVLSNLQKFIRIEELDAIILTHLHSDHMSDMMVLRYAVQIKMNRGFGNK 86 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 PIDVYA E F L PI +V+ + + K ++ + Sbjct: 87 PIDVYAPA----QPQEEFSRI-NILGIFNLNPITPELVLNFGKMRLEFKEMVHPVKCYAL 141 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSS--HFS 219 G Y D + +E + D +++DA K+ + H + Sbjct: 142 SITSGD--------KRFVYSGDTSW-NESIIEFSKEADLIMLDAGLLSKDKQSDNVPHLT 192 Query: 220 LSESLKKIELINPKNAILTHMHVDLD---YDMVLKSTPSRVVPA 260 E + N +LTH + D + K + S V A Sbjct: 193 ARECGIVAQKANAGKLLLTHFWPEDDVTNHIAEAKESFSNVEIA 236 >gi|297157386|gb|ADI07098.1| beta-lactamase domain-containing protein [Streptomyces bingchenggensis BCW-1] Length = 255 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 85/259 (32%), Gaps = 48/259 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M T+LGC P + S +T + VD Sbjct: 1 MSAELRLTVLGCATPY--PSVDNPC-------------------SGYLVTSGDTHIWVDA 39 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPD 113 G + R ++ +DA+ +H HADH D L Y+ ++ PI +Y P Sbjct: 40 GTGTLSPLQRHVRLDELDAIWISHLHADHSA--DLLTAYYGALFADIQLAAPIPLYGPP- 96 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + + +R+ P+ + I+ ++ G + HG I + Sbjct: 97 ---GIADRLAHFLTNTAERS--PVESAFAIDELHDGHQVR--IGALTLTSRAVAHG-IPA 148 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HFSLSESLK 225 R ++ Y D P+ + + D L+ +A SS H + ++ Sbjct: 149 FALRAEADGRSLVYSGDTAPCPSLT-SLAEGCDVLLCEAESAERPSSGEQVHHTPEDTGD 207 Query: 226 KIELINPKNAILTHMHVDL 244 I+TH+ L Sbjct: 208 TARAAGAGRLIVTHVGRFL 226 >gi|257076895|ref|ZP_05571256.1| ribonuclease Z [Ferroplasma acidarmanus fer1] Length = 312 Score = 72.1 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 91/289 (31%), Gaps = 72/289 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M T LG G S+ PK R+ ++ I + D Sbjct: 3 MASNIRITFLGTGGSM----------------PKPGRSLPAVAIQVDDILN-----LFDC 41 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMK 116 G Q ++ V S+ + +H HADH G+ GL F+ + I+++ + Sbjct: 42 GEGTQKQFMKSGVSFMSLSNIFISHFHADHFLGLPGLLNSLSFMGRTEDINIFGPVGAVN 101 Query: 117 HLFE-------SFRY---CFKALDDRTY---------------PPIVNPIVIENNDVPIC 151 + Y ++ + +Y P ++ + E + I Sbjct: 102 FIRNAITLGYGRISYNINVYEVIPGTSYNLGKFTIRTLANNHTVPSISYSLEEKDLTKID 161 Query: 152 ---MKSAGGVIEAIPILQQHGRISSLG--FRFGNVA----------YCTDVNAFPAESLE 196 + G + + L+++G++ G + +VA Y D P E Sbjct: 162 RKKVDEIGFPVYRLEELRKNGKVELNGKEYLLNDVAMGIKKGRKVVYTGDTRPVPE-MPE 220 Query: 197 KLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTH 239 +N D LI D + H S ++ + K L H Sbjct: 221 FAKNADVLIHDTTMDSSMEPMVNEYGHSSARQAAEIALKGGVKKLFLFH 269 >gi|188535007|ref|YP_001908804.1| pyrroloquinoline quinone biosynthesis protein PqqB [Erwinia tasmaniensis Et1/99] gi|226704952|sp|B2VDC9|PQQB_ERWT9 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|188030049|emb|CAO97935.1| Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) [Erwinia tasmaniensis Et1/99] Length = 303 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 91/315 (28%), Gaps = 63/315 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ C RT+SS+ +S V+ + Sbjct: 1 MKIKVLGSAAGGGFPQWNCYCRNCQGVRDGSIAATARTQSSIAVSDNGRDW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I +++ T DH G+ LR Q V+ Sbjct: 57 SPDICHQIAANPELHQPGVLRGSAIGSIILTDSQIDHCTGLLNLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P+ L F F L + + I+ AIPIL Sbjct: 112 PEVHADLTSGFP-IFTMLQH--WNGGLVHHAIQPARSFSVAVCPSLRFTAIPILSNAPPY 168 Query: 172 SSLGFR----------FGNVA------YCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 S R + A Y + A LE + D L+ID Sbjct: 169 SPFRGRPLPGHNIALMIEDTASGSRLLYAPGLGEPDAPLLELMSQADCLLIDGTLWQDNE 228 Query: 210 --------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHV-----DLDYDMVLKST 253 G H +L E + + + IL H++ D D L T Sbjct: 229 LANTGVGRNTGRDMGHLALGEERGLMTLLGELPAARKILIHINNTNPILDGSSDERLALT 288 Query: 254 PSRVVPAFDGMQFSS 268 + ++DGM Sbjct: 289 ARGIEVSYDGMSIEL 303 >gi|290559586|gb|EFD92914.1| Ribonuclease Z [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 304 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 93/303 (30%), Gaps = 73/303 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG P +R S+ +S T +++D G Sbjct: 4 LTFLGT----------------SSAFPTAKRNHPSVYLSI-----EGTRMLLDCGEGTQR 42 Query: 67 QVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFESF- 122 Q+ + + SID + TH H DH G+ G+ K + + ++ + + Sbjct: 43 QIRKAGLSPSIDYIFITHWHGDHSLGVGGMIQSLNMMKSNKLLYIFGPSGTKESVENIIK 102 Query: 123 RYCFKALDDRTYPPI---VNPIVIENNDVPICMKSAGGVIEAIPILQ-QHGRISSLGFRF 178 Y F + PI ++I N + + ++ + +H + L + Sbjct: 103 SYKFYNNVNVKKVPINAVKERLLINNEKYSVSAINVKHSVKCLAYKVSEHDSRNILVDKL 162 Query: 179 GNV--------------------------------------AYCTDVNAFPAESLEKLQN 200 + AY TD+ F L ++ Sbjct: 163 SKMNIKPGEFLKDLKNGKDVLYNGKKLKYKDFTYIKKGKSIAYVTDL-RFENTILPFVKG 221 Query: 201 LDFLIID-ALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 +D LII+ S H +++E++K + KN H D +++ Sbjct: 222 VDTLIIESTFAADFKRSYDFFHLNINEAMKIAKDSGAKNVYFVHTSQRYDNTDLMQKDAQ 281 Query: 256 RVV 258 V Sbjct: 282 NVF 284 >gi|315231971|ref|YP_004072407.1| ribonuclease Z [Thermococcus barophilus MP] gi|315184999|gb|ADT85184.1| ribonuclease Z [Thermococcus barophilus MP] Length = 307 Score = 72.1 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 37/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G G+ P R S+ + E ++ D G Sbjct: 2 LEVIFLGTG---GI-------------MPNKERNVPSIALRYEGEI-----ILWDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ I+ + TH H DH G+ L +++P+ +Y + + Sbjct: 41 LRQLNTAKLSPMRIEKIFITHFHGDHYLGLMSLIQTMTLWNREKPLHIYGPKYTFEFIQN 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L + P V E + + G E +HG I +LG+ F Sbjct: 101 -------YLKSGFFAPSFEIHVHELGEARLKF----GDYEIWSFKVEHG-IPALGYVFK 147 >gi|229042931|ref|ZP_04190664.1| Beta-lactamase domain protein [Bacillus cereus AH676] gi|228726396|gb|EEL77620.1| Beta-lactamase domain protein [Bacillus cereus AH676] Length = 244 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|45358469|ref|NP_988026.1| ribonuclease Z [Methanococcus maripaludis S2] gi|56749433|sp|Q6LYT2|RNZ_METMP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|44921227|emb|CAF30462.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 308 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 108/335 (32%), Gaps = 99/335 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R S+ + E + D G + Sbjct: 1 MKITFLGTGAAI----------------PTKYRAHPSISLKFDGEI-----FLFDCGENT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q++ V I+ + TH H DH+ G+ GL F +K+P+++Y + +K + Sbjct: 40 QRQIIFTDVSPMKINNIFITHLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEH 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------- 169 + ++D YP +N I + + + + + P++ Sbjct: 100 ILGVGYHSID---YP--INVHEISSKTPERIIFTNNYEVFSYPVVHSVPALAYVFKQVKK 154 Query: 170 ------RISSLGFRFGN--------------------------------VAYCTDVNAFP 191 ++ LG G V Y D P Sbjct: 155 PRMDLEKVKKLGIEIGPDLKRLKDGFNVELNGEIITLNDVTLPPKKGICVGYSGDT--IP 212 Query: 192 AESL-EKLQNLDF--LIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + E L+ L LI +A +N + H + +++L +L +LTH+ Sbjct: 213 LKEFAEFLKELKCNTLIHEATFDKTMERNAKETLHSTATDALNIAKLSGVSTVLLTHISA 272 Query: 243 DLDYD--------MVLKSTPS-RVVPAFDGMQFSS 268 D P V+ A D M++S Sbjct: 273 RYDNLNAFENEIVEFKAENPEIHVLIAEDLMEYSL 307 >gi|229195399|ref|ZP_04322168.1| Beta-lactamase domain protein [Bacillus cereus m1293] gi|228588098|gb|EEK46147.1| Beta-lactamase domain protein [Bacillus cereus m1293] Length = 244 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDESGFQSLTHKPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|228919919|ref|ZP_04083274.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228938322|ref|ZP_04100935.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971200|ref|ZP_04131831.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977809|ref|ZP_04138193.1| Beta-lactamase domain protein [Bacillus thuringiensis Bt407] gi|229177618|ref|ZP_04304995.1| Beta-lactamase domain protein [Bacillus cereus 172560W] gi|228605808|gb|EEK63252.1| Beta-lactamase domain protein [Bacillus cereus 172560W] gi|228781919|gb|EEM30113.1| Beta-lactamase domain protein [Bacillus thuringiensis Bt407] gi|228788527|gb|EEM36475.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821359|gb|EEM67371.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228839735|gb|EEM85021.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|326938830|gb|AEA14726.1| metal-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 244 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|147920277|ref|YP_685953.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110621349|emb|CAJ36627.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 247 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 81/249 (32%), Gaps = 39/249 (15%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSID---------AVLYTHPHADHIHGIDGLR 96 +E G+ V++D + + + +D + +H H DHI G+ + Sbjct: 12 YDNETGNTVCVLIDAPEGYILLDAGNGIHKLDRYMTEDKPAYLFLSHFHLDHIGGLHTIV 71 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + ++ K L + R + D P ++ ++P + + Sbjct: 72 RLNFPRG--LQIFGQEGTRKILGDVLRQPYSVPIDGM------PFKVDIRELPEDLAAVP 123 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 + + P++ GFRF + YCTD +E ++ D LI + Sbjct: 124 FLEDFRPLVH---VSPCTGFRFRLGGKVITYCTDT-GLCDNLIELGRDADILITECSALS 179 Query: 210 -KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK---------STPSRVVP 259 + H + +++ + K +L H + L Y V Sbjct: 180 GQQRSSWPHLAPEDAVVVSKKSGAKRVVLVHFNASL-YPTAESRRQVQAFVGREADNVTI 238 Query: 260 AFDGMQFSS 268 + D M Sbjct: 239 SHDDMIIEL 247 >gi|257125889|ref|YP_003164003.1| beta-lactamase [Leptotrichia buccalis C-1013-b] gi|257049828|gb|ACV39012.1| beta-lactamase domain protein [Leptotrichia buccalis C-1013-b] Length = 257 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 70/221 (31%), Gaps = 50/221 (22%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N ++D G + + +++ I + TH H+DHI G+ + +K I Sbjct: 20 GNKKFLIDAGFSGKKIVEKLNNIGKRIEDIKGIFVTHEHSDHIQGLG-----VISRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y D N I N+ + I Sbjct: 75 PIYLHEVTYN----------VIKDKIGKIDKKNLNFIRNDKIKIE------NCVINNFEV 118 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H LG+ F ++Y +DV E L+N D +++ + L G + Sbjct: 119 MHDAKKCLGYTFEYEGKKLSYASDVGCVNNIIKENLKNSDVIVLESNYDYNMLMEGPYHW 178 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S +E+ K I + K L H+ D Sbjct: 179 ELKNRVKGRNGHLSNAEASKLIAQVLNEKLKKIYLMHISKD 219 >gi|15669696|ref|NP_248509.1| hypothetical protein MJ_1502 [Methanocaldococcus jannaschii DSM 2661] gi|1592137|gb|AAB99515.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 324 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 93/319 (29%), Gaps = 97/319 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA+ VP KNR I + G + D G + Sbjct: 11 MKLIFLGTGAA--VP-------------SKNRN-----HIGIAFKFGGEV-FLFDCGENI 49 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L +V I+ + TH H DHI GI GL F +++ + ++ + + Sbjct: 50 QRQMLFTEVSPMKINHIFITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIEN 109 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S + Y + PI + E I +HG I S + F Sbjct: 110 SLK------LGTHYIEFPIKVYEIYTKEPITIYKEENY-EIIAYPTEHG-IPSYAYIFKE 161 Query: 181 V-----------------------------------------------------AYCTDV 187 + AY D Sbjct: 162 IKKPRLDIEKAKKLGVKIGPDLKKLKNGEAVKNIYGEIIKPEYVLLPPKKGFCLAYSGDT 221 Query: 188 NAFPAESL-EKLQ--NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILT 238 P E + L+ D LI +A + H ++ +++ +L N K ILT Sbjct: 222 --LPLEDFGKYLKELGCDVLIHEATFDDSAKDAAKENMHSTIGDAVNIAKLANVKALILT 279 Query: 239 HMHVDLDYDMVLKSTPSRV 257 H+ D + V Sbjct: 280 HISARYDKEEYFNLYKMNV 298 >gi|291001019|ref|XP_002683076.1| predicted protein [Naegleria gruberi] gi|284096705|gb|EFC50332.1| predicted protein [Naegleria gruberi] Length = 386 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 96/310 (30%), Gaps = 71/310 (22%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG G+S VP R + + ++ ++ D G Sbjct: 74 QEFEIIFLGTGSS--VPS--------------KYRNVTGILLNLF----DKGAILFDCGE 113 Query: 63 DFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGL---------RGYFLKQKRP 105 Q+ R + ++ + +H HADH G+ L + + Sbjct: 114 GTLSQLYRACGKERAETILKNLKCIWISHLHADHHLGLAYLLEKRSKLTSEDVVIVGQGR 173 Query: 106 IDVYAAPDCMKHLFESFRYCF---KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I + + F + F + L+ Y P I+++ P+ +KS I Sbjct: 174 IKEALSEYLVCSSDTKFNFDFIPMQTLEPERYCP--EKILLDRVINPLGLKS------FI 225 Query: 163 PILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKN 211 + H + G V + D ++ LI +A +K+ Sbjct: 226 NVPVDHTCAEAYGIVITHQNGWKVVFSGDTRPCSRLIKAG-KDCTVLIHEATFEASMIKD 284 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVD------LDYDMVLKSTPSRVVPAFDGMQ 265 + H E++ E +N ILTH +D + V A D M+ Sbjct: 285 AISKKHTCSFEAIAVGEQMNAYRTILTHFSQRYCKFPIVDSQKTDYAL-RNVAVAHDLMR 343 Query: 266 FS----SPIP 271 + PIP Sbjct: 344 LNAKKLIPIP 353 >gi|257462674|ref|ZP_05627083.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|317060322|ref|ZP_07924807.1| Zn-dependent hydrolase [Fusobacterium sp. D12] gi|313685998|gb|EFS22833.1| Zn-dependent hydrolase [Fusobacterium sp. D12] Length = 259 Score = 71.7 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 77/228 (33%), Gaps = 51/228 (22%) Query: 56 VIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + + ++ A+L TH H DHI G L +K I +Y Sbjct: 24 ILIDAGFSCKKIEERLASIGKAAENVKALLITHEHTDHISG-----AGVLARKYDIPIYI 78 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 +P+ ++ + + I + I H Sbjct: 79 SPESLEACKQKLG-------------KIAENQIHCIQKDFFLNE---NIYVKAFDVMHDA 122 Query: 171 ISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS---- 215 + +LGF +A TD+ E Q++D I+ + L NG + Sbjct: 123 VRTLGFHIETASQKKIAISTDIGYITNLVREAFQDVDAAILESNYDYNMLMNGPYPWDLK 182 Query: 216 -------SHFSLSESLKKIELINPK---NAILTHMHVDLDYDMVLKST 253 H S +++ K I + K L H+ D ++ ++ T Sbjct: 183 ARVKGINGHLSNNDAAKFIREMYTKKLQKIFLAHVSKDSNHPNIIHET 230 >gi|225022017|ref|ZP_03711209.1| hypothetical protein CORMATOL_02049 [Corynebacterium matruchotii ATCC 33806] gi|224945214|gb|EEG26423.1| hypothetical protein CORMATOL_02049 [Corynebacterium matruchotii ATCC 33806] Length = 307 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 91/324 (28%), Gaps = 85/324 (26%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTR-SSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G+ G P RTR ++ I +R + D G Sbjct: 3 LTFLGTGS--GTP----------------TRTRNTAATIYARPDRSEF--WLFDCGEATQ 42 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL--- 118 Q+LR + + V TH H DH G+ G F P+ +Y P + + Sbjct: 43 HQMLRHGINMNKVSRVFITHMHGDHTFGLPGFISSRAFRTPGDPLTIYGPPGIAEFVSVT 102 Query: 119 ------FESFRYCFKALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEA--IPILQQH 168 + LD P+ + + + + ++S I P Q Sbjct: 103 LNTSASHIRYPLKVVELDHAGEVPLGQDDTVTVRYTTLDHGVQSYAYRITEADQPGELQV 162 Query: 169 GRISSLGFRFG---------------------------------NVAYCTDVNAFPAESL 195 ++ G + G ++ D P + Sbjct: 163 DKLIDHGVQPGPCYGQLKRGEDITLDNGTVLRSADFVGPPQSGPDIVLFGDTRFVPGHA- 221 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + D ++ +A + H + +++ + K +LTH D D Sbjct: 222 DFAAGADLMVHEATYGPEYPDKAQKYFHSTTTQAAELARQAGVKKLVLTHFSARYDTDEK 281 Query: 250 LKSTP-------SRVVPAFDGMQF 266 L V A DG Sbjct: 282 LAELLAGAQAIFPHTVLAADGATI 305 >gi|153853269|ref|ZP_01994678.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] gi|149754055|gb|EDM63986.1| hypothetical protein DORLON_00663 [Dorea longicatena DSM 13814] Length = 265 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 87/232 (37%), Gaps = 47/232 (20%) Query: 51 GSNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 T ++VDTG + L + ++ +L TH H DHI G+ +K Sbjct: 19 DDQTHLLVDTGISKKRIEEGLSKLEIKGDELEGILITHEHVDHIQGLG-----VFSRKYE 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +YA P ++ + K + +++ I + G + P Sbjct: 74 IPIYATPGTIEGIRNCKS-LGKLPEGLL------------HEIEIEHPFSLGTLNIDPFA 120 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H G+R N VA TD+ + ++E L +L+ ++++A L+ G + Sbjct: 121 ISHDANEPSGYRIENGKKSVAVATDLGVYDDYTVEHLSDLNAVVLEANHDIHMLEVGPYP 180 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S K + I + + +L H+ + +Y+ + T Sbjct: 181 YPLKRRVMGDKGHLSNELSGKLLCDILHDDLQYVVLGHLSKENNYEELAYET 232 >gi|138895904|ref|YP_001126357.1| ribonuclease Z [Geobacillus thermodenitrificans NG80-2] gi|134267417|gb|ABO67612.1| Metal-dependent hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 308 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 101/325 (31%), Gaps = 78/325 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 2 SLELLFLGTGA--GVP-----------AKERNV---SSIALQLLEERGA--TWLFDCGEA 43 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA----PDCM 115 Q+L + I+ + TH H DH+ G+ GL G F + P+ V+ Sbjct: 44 TQHQILHTAIRPRRIEHIFITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRQFVE 103 Query: 116 KHLF---ESFRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVI--EAIPILQQHG 169 L RY + D + + M S G + + +P Sbjct: 104 TALTVSGTRLRYELNIAEIDEGVIFDDERFSVTAKRLDHGMPSYGFRVAEKDLPGPLLVD 163 Query: 170 RISSLGFRFGNV---------------------------------AYCTDVNAFPAESLE 196 R+ +LG R G + A D F ++E Sbjct: 164 RLKALGVRPGPIYQQIKQGKTVVLEDGTVLDGREFVGPPQKGRIVAVLGDT-RFCEAAIE 222 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 D +I +A + H + +++ + + K ILTH+ + L Sbjct: 223 LAHEADVVIHEATFAAAEQRLARDYFHSTTTDAAEVAKRAGAKRLILTHISSRYQGEAAL 282 Query: 251 KSTPS------RVVPAFDGMQFSSP 269 K A D FS P Sbjct: 283 KLLEEARRVFPNTELAADFASFSIP 307 >gi|83311435|ref|YP_421699.1| beta-lactamase superfamily hydrolase [Magnetospirillum magneticum AMB-1] gi|82946276|dbj|BAE51140.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Magnetospirillum magneticum AMB-1] Length = 274 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 79/242 (32%), Gaps = 36/242 (14%) Query: 56 VIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 V+ D G +++ + + +TH H DHI+G + R +D++ Sbjct: 40 VVFDAGTGIRSLGREIIGHGLAHAH-LFFTHTHWDHINGFPFFAPAYNPAFR-LDIHGPK 97 Query: 113 D--CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + + + IV + + S + +H Sbjct: 98 QDGSPRGIQHVLMGQMETPNFPVPLAAMRGIVSYEDFEVGSIFSPYDGVTLRTAPLRHPN 157 Query: 171 ISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA------LKNGLHSS 216 + G+R VAY TD P L ++ D +I D + Sbjct: 158 -GACGYRLETGGVVVAYITDTEHVPGTPDENVLFLMRGADLVIYDCTYTDDQFPTKIGWG 216 Query: 217 HFSLSESLKKIELINPKN-AILTHMHVDLDY---------DMVLKSTPSRVVPAFDGMQF 266 H + E ++ K AI H D ++ ++S + VV A DGM+ Sbjct: 217 HSTWQEGIRLARAAGAKRLAIF---HHDPEHTDDIMAGIEAEAVRSW-TGVVVARDGMEI 272 Query: 267 SS 268 + Sbjct: 273 TL 274 >gi|308071604|ref|YP_003873209.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] gi|305860883|gb|ADM72671.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Paenibacillus polymyxa E681] Length = 268 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 51/230 (22%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +TT+++D G ++L+E+ +D +L TH H+DH+ G+ + +K Sbjct: 20 RNEDTTLLIDAGLSAKRIDELLKERDLSGEELDGILVTHEHSDHVKGLGAMA-----RKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA F + N ++E + Sbjct: 75 NLPIYANEKTW----------FAISNAVGQIADDNRRILETGATR-----EFESLRVESF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ F ++ TD+ + + + + D L++++ L+ G + Sbjct: 120 GISHDAAEPVGYSFYDGAEKLSVATDLGYVSDKVKQAISDADVLVLESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 H S + + + K L H+ D++M+ Sbjct: 180 PWNIKRRILSDIGHLSNEMAGAILSELLTGRTKRTYLAHLSR--DHNMME 227 >gi|224476616|ref|YP_002634222.1| putative ribonuclease Z [Staphylococcus carnosus subsp. carnosus TM300] gi|254808665|sp|B9DNT1|RNZ_STACT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|222421223|emb|CAL28037.1| putative ribonuclease Z [Staphylococcus carnosus subsp. carnosus TM300] Length = 306 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 98/312 (31%), Gaps = 81/312 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G GA+L PT +N I+ + SN+ + D G Sbjct: 1 MEITFFGTGAAL-------------PTKERNT-----QAIALNLDPYSNSIWLFDAGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + I+ + TH H DHI+G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKINHIFITHMHGDHIYGLPGLLTSRSFQGGENKPLTIVGPRGIKNYVE 102 Query: 112 ------------PDCMKHLFESFRYCFKALDDRTY-----PPIVNPIVIENNDVPICMKS 154 P + + Y + Y P + + Sbjct: 103 TTLQASLSRLNYPVTFIEIDDQLHYHHEGFTVSAYNLNHGVPSFGYRIEAPTTSGKIDVA 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAY-CTDVNA--------------FP-AESLEKL 198 + I P + +S F F + Y +D P L+ Sbjct: 163 SLREIGMEPGPKYQEVKNSDSFIFNDKVYQSSDFKGEEKVGPKIAIFGDTMPCENELKLA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH-------VD 243 N D L+ +A L + H SH + + L +E N K A+L H+ +D Sbjct: 223 DNADLLVHEATYIDGDRSLADSHHHSHIN--DVLHLLEATNSKQALLNHISNRYNLSDID 280 Query: 244 LDYDMVLKSTPS 255 + Y + P+ Sbjct: 281 VIYAELQNQYPN 292 >gi|72382759|ref|YP_292114.1| RNAse Z [Prochlorococcus marinus str. NATL2A] gi|123620865|sp|Q46JB7|RNZ_PROMT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|72002609|gb|AAZ58411.1| RNAse Z [Prochlorococcus marinus str. NATL2A] Length = 314 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 78/309 (25%), Gaps = 106/309 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP + S + + +R + D G Sbjct: 1 MQVTFLGT--SSGVPTLN---------------RNVSAMVLKPPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q +R + I + TH H DHI+G+ GL I++Y + Sbjct: 42 QHQFIRSNLKLSQIKKIFITHMHGDHIYGLPGLLASIGLAGSSSGIELYGPAPLKNFIDS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + +EN + +E +H RI S +R Sbjct: 102 CL-----YNSSSRLAYSLKFHRVENAANNKEILFEDSELEVKTAPLKH-RIPSFAYRVNQ 155 Query: 179 ----GNV--------------AY----------------------------------CTD 186 G Y CTD Sbjct: 156 KTRPGRFDIEKAKSKGIPPGPVYADLQRGEEVRLEDGRIFSGKEFCGPPRPGVSMVYCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 + ++E + D LI H S H + + + + N Sbjct: 216 TV-YTESAIEISRKADLLI--------HESTYSYKETEMAYERGHSTATMAAQIAAKANV 266 Query: 233 KNAILTHMH 241 ILTH+ Sbjct: 267 DQLILTHLS 275 >gi|330503849|ref|YP_004380718.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas mendocina NK-01] gi|328918135|gb|AEB58966.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas mendocina NK-01] Length = 304 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 100/314 (31%), Gaps = 64/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 H ILG A G P+ + C RT+SS+ IS E+ ++ + Sbjct: 1 MHIQILGSAAGGGFPQWNCNCRNCRGVRAGTLRAQPRTQSSIAISDDGEQW----ILCNA 56 Query: 61 GPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ +I ++ DH G+ L++ P +V+ Sbjct: 57 SPDIRAQIEAFPALQPARKLRDTAIAGIVLLDSQIDHCTGL-----LTLREGCPHEVWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI------PI 164 + L F F L + + +IE + P + + I AI P Sbjct: 112 EMVHQDLTTGFP-LFNML--SHWNGGLQHRLIELDAKPFSIPACPALSITAIALRSSAPP 168 Query: 165 LQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----- 209 H G G ++ Y + + L ++ D L++D Sbjct: 169 YSPHRGNPHPGDNIGLFIEDRRSGRSLFYAPGLGQVDEQLLSWMRRADCLLVDGTLWRDD 228 Query: 210 ---------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHV-----DLDYDMVLKS 252 K G H S ++ ++ + IL H++ DLD + Sbjct: 229 EMRVCEVGDKLGSEMGHLCQSGPGGMIEVLDGLPSARKILIHINNTNPILDLDSPERTEL 288 Query: 253 TPSRVVPAFDGMQF 266 + AFDGM Sbjct: 289 DAHGIEVAFDGMSI 302 >gi|322491804|emb|CBZ27077.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 468 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 44/179 (24%) Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN------------- 180 P+ + I A + +HG+ S+ + FG Sbjct: 289 RPLRMHLPITATAATAGGTDAASDLPFYSFPVEHGKGYISMAWVFGRGTAFKSQQAPQQG 348 Query: 181 --------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKN--GLHSSHFSLSESLKKI 227 V Y +DV+ PA S+ LQ+L D L +D L + H+ + + Sbjct: 349 PQQREGSCVVYISDVSHIPATSMAFLQDLVKIDVLFVDCLSPSGRVSPVHYCEDGMMALV 408 Query: 228 ELINPKNAILTHMHVDLDYD----MVLKSTPSR-------------VVPAFDGMQFSSP 269 + P++ MH L++ + K+ S V ++DGMQ P Sbjct: 409 VALKPRHVFGVGMHCALEHSKWTGELQKALDSHVAAGRLRAGEVQCVELSYDGMQVLLP 467 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 13/94 (13%) Query: 55 TVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF---------LK 101 ++VD G F ++R + ++D +L TH HAD + G+D LR Sbjct: 142 HILVDCGKTFRDAYFKVMIRCNIRTVDTLLLTHGHADAVAGLDDLRDLQAMHMVSTGDWV 201 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + Y +P +K L +S Y + + Sbjct: 202 VDSFVPTYLSPSTLKTLEKSVDYIVRNSVKSGHA 235 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 8/51 (15%) Query: 7 FTILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKISRVSER 50 T++G G S GVP I + DP+ P N R SL I+ Sbjct: 27 LTVVGSGVSTGVPVIGHLGLGCACEHAVADPSGP-NCRNNISLLITLPRRD 76 >gi|311067510|ref|YP_003972433.1| putative metal-dependent hydrolase [Bacillus atrophaeus 1942] gi|310868027|gb|ADP31502.1| putative metal-dependent hydrolase [Bacillus atrophaeus 1942] Length = 244 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 37/236 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + + +++VD G ++ +D V+ +H H DHI I L+ + K Sbjct: 25 QSGDYSLLVDCGSAVLSKLFAYVPAEELDTVILSHYHHDHIADIGPLQFAKQVGSFLGKG 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K + +Y ++ F+ Y Y P D P+ G Sbjct: 85 KEALPIYGHDADIEQ-FQRLTYK-SHTKGMAYHP----------DQPLT----AGPFTIT 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R + V Y D +++ + ++ D LI + ++G Sbjct: 129 FLKTVH-PVVCYAMRITDGIHTVVYTAD-SSYQDSFIPFAKDADLLISECNFYADQDGKS 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQF 266 + H + E+ + E K +LTH+ ++ + + V A G+ + Sbjct: 187 AGHMNSLEAGRIAERAGAKELLLTHLPHFGVHERLRDEAKTVFHGNVDIAKSGLVW 242 >gi|305681289|ref|ZP_07404096.1| ribonuclease Z [Corynebacterium matruchotii ATCC 14266] gi|305659494|gb|EFM48994.1| ribonuclease Z [Corynebacterium matruchotii ATCC 14266] Length = 307 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 91/324 (28%), Gaps = 85/324 (26%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTR-SSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G+ G P RTR ++ I +R + D G Sbjct: 3 LTFLGTGS--GTP----------------TRTRNTAATIYARPDRSEF--WLFDCGEATQ 42 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL--- 118 Q+LR + + V TH H DH G+ G F P+ +Y P + + Sbjct: 43 HQMLRHGINMNKVSRVFITHMHGDHTFGLPGFISSRAFRTPGDPLTIYGPPGIAEFVSVT 102 Query: 119 ------FESFRYCFKALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEA--IPILQQH 168 + LD P+ + + + + ++S I P Q Sbjct: 103 LNTSASHIRYPLEVVELDHAGEVPLGRDDTVTVRYTTLDHGVQSYAYRITEADQPGELQV 162 Query: 169 GRISSLGFRFG---------------------------------NVAYCTDVNAFPAESL 195 ++ G + G ++ D P + Sbjct: 163 DKLIDHGVQPGPCYGQLKRGEDITLDNGTVLRSADFVGPPQSGPDIVLFGDTRFVPGHA- 221 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + D ++ +A + H + +++ + K +LTH D D Sbjct: 222 DFAAGADLMVHEATYGPEYPDKAQKYFHSTTTQAAELARQAGVKKLVLTHFSARYDTDEK 281 Query: 250 LKSTP-------SRVVPAFDGMQF 266 L V A DG Sbjct: 282 LAELLAGAQAIFPHTVLAADGATI 305 >gi|206976596|ref|ZP_03237502.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217958669|ref|YP_002337217.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|229137877|ref|ZP_04266476.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST26] gi|206745279|gb|EDZ56680.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217064618|gb|ACJ78868.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|228645534|gb|EEL01767.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST26] Length = 244 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDESGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|119715552|ref|YP_922517.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614] gi|119536213|gb|ABL80830.1| beta-lactamase domain protein [Nocardioides sp. JS614] Length = 256 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 86/275 (31%), Gaps = 52/275 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P P S + V++D G Sbjct: 1 MRVTIVGCSGSYPGPE--------SPA--------SCYLLEAEDGSDRTWRVLLDLGNGS 44 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKH 117 + R L+IDAVL +H HADH +D Y L++ P I V+ Sbjct: 45 LGALHRFADPLAIDAVLLSHLHADHC--LDLCGYYVLRKYHPLGPQPRIPVWGPEGTADR 102 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + ++ P + E G P+ H + + G R Sbjct: 103 MARAYD-----------LPSDPGMHHEFEFHEWHGAEQIGPFRVEPVAVNH-PVPAYGLR 150 Query: 178 FG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG----LHSSHFSLSESLKKIE 228 +AY D P +L+ L + D + +A H + ++ + Sbjct: 151 VTADGMTLAYTGDTG--PCAALDDLAHDADLFLAEASFRSGDDNPPDLHLTGADGGEVAA 208 Query: 229 LINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + +LTH+ D + V ++DG Sbjct: 209 RAGVRRLVLTHVPPWHDPQDAVAEA----VASYDG 239 >gi|313115614|ref|ZP_07801072.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310622063|gb|EFQ05560.1| metallo-beta-lactamase domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 262 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 69/225 (30%), Gaps = 54/225 (24%) Query: 50 RGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +IVD G L V D +L TH H+DH+ G+ +K Sbjct: 19 RCGQRYLIVDMGKGVRTTSAALKALGLAVSDCDGILVTHEHSDHVKGLS-----TFLKKN 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY A + L + P +E + + G Sbjct: 74 TLPVYGAAATLDFL----------DSNGIVPASCELHELEGREEDV------GAFGVQSF 117 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + +G+R + TD+ E L D + +++ L++G Sbjct: 118 PTSH-DVPCVGYRIHTPDGKTMTIATDLGVLTPPVHEALSGCDLVALESNYDLHMLRSGP 176 Query: 214 HS-----------SHFSLSES----LKKIELINPKNAILTHMHVD 243 + H S E L+ I+ K L H+ + Sbjct: 177 YPYYLRARIESTRGHLSNDECSAKLLELIQE-GCKKFALCHLSQE 220 >gi|170041665|ref|XP_001848575.1| ribonuclease Z, mitochondrial [Culex quinquefasciatus] gi|167865235|gb|EDS28618.1| ribonuclease Z, mitochondrial [Culex quinquefasciatus] Length = 784 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 102/303 (33%), Gaps = 72/303 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S +P N+ S + R S +++++D G Sbjct: 463 RIVFLGTGSS--IP---------------NKTRNVSAILVRTSPD---SSILLDCGEGTA 502 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q+ R + SI AV +H HADH G+ GL L+ +R + PD K Sbjct: 503 GQIERLYGVEAAVQVFRSIKAVYISHLHADHHLGLFGL----LQTRRKL---LGPDSEKV 555 Query: 118 LFESFRYCFK---------ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 L + F + Y + N +IE + G E +H Sbjct: 556 LLLAPEQIFYWMRLYDCRFEPLHKEYELVKNAQLIEEPLRDERIHDLGLT-EIATCRVRH 614 Query: 169 GRISSLGFRFG------------NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS 215 S G + Y D P + L +L ++ LI +A Sbjct: 615 CP-HSFGVALRMHSSKKDDTEPIKITYSGDT--MPCQDLVELGRDSTVLIHEATMEDELE 671 Query: 216 S------HFSLSESLKKIELINPKNAILTHMHVDLDYDM---VLKSTPSRVVPAFDGMQF 266 + H +LS+++ + +N + +LTH Y + S + AFD M Sbjct: 672 AEARVKMHSTLSQAISQGRKMNARFTLLTHFSQR--YAKIPRIESELDSNLGIAFDNMDV 729 Query: 267 SSP 269 + Sbjct: 730 TIE 732 >gi|324325214|gb|ADY20474.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 244 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDESGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGTPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|292670801|ref|ZP_06604227.1| metallo-beta-lactamase superfamily protein [Selenomonas noxia ATCC 43541] gi|292647422|gb|EFF65394.1| metallo-beta-lactamase superfamily protein [Selenomonas noxia ATCC 43541] Length = 260 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 78/244 (31%), Gaps = 62/244 (25%) Query: 35 NRRTRSSLKISRVSERGSNTTV---------IVDTGPD---FYMQVLREQV--LSIDAVL 80 N R SL++S ++ ++ ++D G ++ + S+DAVL Sbjct: 3 NMRGGCSLQVSILASGSKGNSIYVELNGAHLLIDAGISAACITERLKEHGIEPQSLDAVL 62 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH+ G+ L ++ + + A + + Sbjct: 63 VTHEHIDHVRGLK-----TLAKQYHLPIIATRGTLAGI-------------------DGG 98 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLE 196 +N I G + P H GFR YC TD+ Sbjct: 99 AAFADNMQSITDDFTIGDVTVRPFAISHDAAEPCGFRIEG-GYCCTIATDLGVVTETVQH 157 Query: 197 KLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELIN--PKNAIL 237 ++ D L+++A L+ G + H + ++ + + P+ L Sbjct: 158 AMEGADVLVLEANHDADMLRQGSYPWPLKRRILSNRGHLANGDAAWALTRMKKYPRKVYL 217 Query: 238 THMH 241 H+ Sbjct: 218 AHLS 221 >gi|154150195|ref|YP_001403813.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998747|gb|ABS55170.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 247 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 25/184 (13%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 + +H H DH G+ L + K+ I V D L E Y LD + Sbjct: 54 LFLSHFHLDHTEGLHTLVKFRFKKGLSICGGVGTTADLAGLLRE--PYTV-PLDRVPFAV 110 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPA 192 V + +++P + +P++ + G+RF V YCTD Sbjct: 111 TVKELKEGVHELPF-------KVTCLPLVHP---VPCTGYRFEIDNKVVTYCTDT-GLCD 159 Query: 193 ESLEKLQNLDFLIIDA-LKNG---LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 ++ ++ D LI + LK G H + ++++ K LTH ++ Y Sbjct: 160 NAVSLARDADLLITECGLKPGEKSPLWPHMNPEDAIEVARRAGAKRLALTHFGAEV-YKT 218 Query: 249 VLKS 252 + + Sbjct: 219 LEER 222 >gi|124026481|ref|YP_001015596.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. NATL1A] gi|166991495|sp|A2C4C2|RNZ_PROM1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123961549|gb|ABM76332.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. NATL1A] Length = 314 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 78/309 (25%), Gaps = 106/309 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP + S + + +R + D G Sbjct: 1 MQVTFLGT--SSGVPTLN---------------RNVSAMVLKPPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q +R + I + TH H DHI+G+ GL I++Y + Sbjct: 42 QHQFIRSNLKLSQIKKIFITHMHGDHIYGLPGLLASIGLAGSSSGIELYGPAPLKNFIDS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + +EN + +E +H RI S +R Sbjct: 102 CL-----YNSSSRLAYSLKFHRVENAANNKEILFEDSELEVKTAPLKH-RIPSFAYRVNQ 155 Query: 179 ----GNV--------------AY----------------------------------CTD 186 G Y CTD Sbjct: 156 KTRPGRFDIEKAKLKGIPPGPVYADLQRGEEVRLEDGRIFSGKEFCGPPRPGVSMVYCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 + ++E + D LI H S H + + + + N Sbjct: 216 TV-YTESAIEISRKADLLI--------HESTYSYKETEMAYERGHSTATMAAQIAAKANV 266 Query: 233 KNAILTHMH 241 ILTH+ Sbjct: 267 DQLILTHLS 275 >gi|255281094|ref|ZP_05345649.1| VicX protein [Bryantella formatexigens DSM 14469] gi|255268542|gb|EET61747.1| VicX protein [Bryantella formatexigens DSM 14469] Length = 265 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T+++VD G + + ID +L TH H+DHI GI +K + Sbjct: 20 EQTSLLVDIGISARQAENGLHTIDRTLPDIDGILITHEHSDHIRGIG-----VAARKAGM 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y ++ + +D+ Y ++ G +E +P Sbjct: 75 PIYGTRGTLEAVKRCSS--LGKIDESLYR-----------EIRPDEVFQIGDMEILPFST 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + +R + A TD+ + +E LQ LD ++++A L+ G + Sbjct: 122 SHDAAEPVAYRVNSGGKSAAVVTDLGVYNDYIVEHLQGLDAVLLEANHDVRMLQAGAYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N KN L H+ + +Y+ + T Sbjct: 182 YLKQRILSSHGHLSNENAGRLLCRILHDNLKNVFLGHLSQENNYEALAYET 232 >gi|157125937|ref|XP_001654456.1| zinc phosphodiesterase [Aedes aegypti] gi|108873466|gb|EAT37691.1| zinc phosphodiesterase [Aedes aegypti] Length = 783 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 63/298 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S +P N+ S + G +++++D G Sbjct: 461 RVVFLGTGSS--IP---------------NKTRNVSAILVHT---GPGSSILLDCGEGAA 500 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL----RGYFLKQKRPIDVYAAPD 113 Q++R +I A+ +H HADH G+ GL R I + A Sbjct: 501 GQIIRLYGHEQAKNVFRTIKAIYISHLHADHHLGLFGLLQTKRKLLGSDNEKILLIAPEQ 560 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L C + Y I N +++ + G E + +H S Sbjct: 561 ISYWL--RLYDCRFEPVHKDYVLIKNAELVDEPLRDERINDLGLT-EVVTCRVRHCP-HS 616 Query: 174 LGFRFG-------------NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNGLHSS--- 216 G + Y D P ++ ++ LI +A + Sbjct: 617 FGVSLSMNSCQKGEPGEPVKITYSGDT--MPCQNLIDLGRDSTILIHEATMEDELEAEAR 674 Query: 217 ---HFSLSESLKKIELINPKNAILTHMHVDLDYDM---VLKSTPSRVVPAFDGMQFSS 268 H +LS+++++ + +N K +LTH Y + + + AFD M+ + Sbjct: 675 VKMHSTLSQAIEQGKKMNAKYTLLTHFSQR--YAKIPRIESELETNLGIAFDNMEVTL 730 >gi|104779675|ref|YP_606173.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas entomophila L48] gi|166989872|sp|Q1IG46|PQQB_PSEE4 RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|95108662|emb|CAK13356.1| coenzyme PQQ synthesis protein B (Coenzyme PQQ synthesis protein V) [Pseudomonas entomophila L48] Length = 303 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 94/320 (29%), Gaps = 73/320 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D T + RT+SS+ +S E ++ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCKGYRDGTLRASARTQSSIALSDDGEHW----ILCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLVWNRIELEGSFVIEACPNLRFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L+ + D L++D Sbjct: 169 SPHRFDPHPGDNLGLLVEDTRTGGKLFYAPGLGQVDDKLLQMMGGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 + G H + E L + +L H++ ++ + +P Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNP--ILDEDSPE 283 Query: 256 -------RVVPAFDGMQFSS 268 V AFDGM Sbjct: 284 RAEVVRRGVEVAFDGMSLKL 303 >gi|294011338|ref|YP_003544798.1| ribonuclease Z [Sphingobium japonicum UT26S] gi|292674668|dbj|BAI96186.1| ribonuclease Z [Sphingobium japonicum UT26S] Length = 355 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 93/268 (34%), Gaps = 54/268 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG G G P+I + R+ S+ + + T+ ++D G Sbjct: 35 TGRTELIVLGSG---GGPQI------------RKDRSEPSVLLIV-----NGTSYLIDCG 74 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ------KRPIDVYAAPD 113 +++ + + + TH HADH+ G+ + + P+++Y P Sbjct: 75 SGTLRRMVEAGIDSTHVKTIFITHHHADHVVGLADIMADSIFSSSSALPGLPLNIYGPPR 134 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV-----IEAIPILQQH 168 + + + Y +V I++ + + G V I+ I H Sbjct: 135 TAQLVDAAVNYIMVPYTVFARGKLVKDESIQHRFMARDIDRPGLVYEDQNIKVIAAENSH 194 Query: 169 GRI---------SSLGFRF----GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH 214 ++ S +R G + + D P+E++ KL D L+ + + + Sbjct: 195 FQMMPDAARRAEKSYAYRIETPQGVILFTGDTG--PSEAVSKLADGADLLVSEVINDKPM 252 Query: 215 SSHFSLSESLKKIELINPKN--AILTHM 240 E L I +P+ ++ HM Sbjct: 253 VERM---ERLAAIGNWSPERKAMVIAHM 277 >gi|229071647|ref|ZP_04204865.1| Ribonuclease Z [Bacillus cereus F65185] gi|228711583|gb|EEL63540.1| Ribonuclease Z [Bacillus cereus F65185] Length = 307 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 94/301 (31%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPIC--------MKSAGGVI----EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI ++ G I E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMSVKPGPIFKRLKDGEAVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|77920308|ref|YP_358123.1| beta-lactamase superfamily hydrolase [Pelobacter carbinolicus DSM 2380] gi|77546391|gb|ABA89953.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Pelobacter carbinolicus DSM 2380] Length = 239 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 87/290 (30%), Gaps = 76/290 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G +S+ N R R SL R +++D G D+ Sbjct: 1 MQLTFHGTLSSI--------------ANGNTRHARQSLLEIAYGGR----RLLIDCGRDW 42 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + ID A+L TH H DH G+ P VYAA + + + Sbjct: 43 LG-----GLPIIDPVALLLTHAHDDHSGGL--------ACGAPCPVYAAASTWEKIAD-- 87 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGN- 180 F P P + I QH R ++G+R Sbjct: 88 ---FPLHQKVCVP----------LQQPFYIAG----IRIEAFALQHSPRAPAVGYRIQAG 130 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHS--SHFSLSESLKKIE 228 V YC DV P + LQ + I D L+ H LS L+ Sbjct: 131 RSVVFYCPDVARIP-SQRQALQGVQLYIGDGAAYRQSLLRVEDGRLCGHAPLSAQLQWCA 189 Query: 229 LINPKNAILTHMHVDL--DYDMVLKSTPSRVV-------PAFDGMQFSSP 269 + TH ++ + + + + +R A DGM P Sbjct: 190 EAKIPRMLATHCGAEIIANENQITRQLQTRAHRLGIQAGIAHDGMLLKLP 239 >gi|315608084|ref|ZP_07883077.1| metallo-beta-lactamase YycJ [Prevotella buccae ATCC 33574] gi|315250553|gb|EFU30549.1| metallo-beta-lactamase YycJ [Prevotella buccae ATCC 33574] Length = 218 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 43/207 (20%) Query: 76 IDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + +L TH HADH+ + + R + + V+ + + + YC + + + Sbjct: 1 MHHILITHDHADHVKSVGSVCRDF------RLPVFTTRKVHEGIERN--YCVRQKINPAF 52 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAF 190 ++ G P H ++G++ + TDV Sbjct: 53 VHVIEKAT----------SFTLGEFHVTPFGVPHDSADNVGYKIECEGVVFSLMTDVGHL 102 Query: 191 PAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSE-SLKKIELINP 232 E L+ ++ ++L+I+A L G + H S +E ++ E P Sbjct: 103 TDEMLQVIEESNYLVIEANHDKEMLAQGRYPQYLKQRIAGPIGHLSNAECAMALAEHATP 162 Query: 233 --KNAILTHMHVDLDYDMVLKSTPSRV 257 ++ L H+ D ++ + + T +V Sbjct: 163 NLRHVWLCHLSADNNHPELARKTVDQV 189 >gi|154502705|ref|ZP_02039765.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] gi|153796588|gb|EDN79008.1| hypothetical protein RUMGNA_00518 [Ruminococcus gnavus ATCC 29149] Length = 265 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT +++DTG D ++ L + +D +L TH H+DHI G+ +K I Sbjct: 20 DNTHLLIDTGISKKRIDAGLKELEIKGEELDGILITHEHSDHIQGLG-----VFSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA P + + +++ + VI +++ G I P Sbjct: 75 PIYATPGTIAGI-QAYSRLGAMPEGL-------YHVIHSDE-----SFMLGDIRVNPFAI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H G+R +VA TD+ + A ++ LQNLD ++++A L+ G + Sbjct: 122 SHDANEPTGYRLECRDKSVAVATDLGIYDAYTVSHLQNLDAVLLEANHDLHMLEVGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + I N K+ +L H+ + +Y+ + T Sbjct: 182 PLKRRVMGDKGHLSNELSGRLLCDILHDNLKHIVLGHLSKENNYESLAYET 232 >gi|289191998|ref|YP_003457939.1| ribonuclease Z [Methanocaldococcus sp. FS406-22] gi|288938448|gb|ADC69203.1| ribonuclease Z [Methanocaldococcus sp. FS406-22] Length = 320 Score = 71.7 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 94/319 (29%), Gaps = 97/319 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA+ VP KNR I + G + D G + Sbjct: 4 MKLIFLGTGAA--VP-------------SKNRN-----HIGIAFKFGGEV-FLFDCGENI 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L +V I+ + TH H DHI GI GL F +++ + ++ + + Sbjct: 43 QRQMLFTEVSPMKINHIFITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEVIEN 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S + Y + PI + + E I +HG I S + F Sbjct: 103 SLK------LGAHYIEFPIKVYEIYAKEPITVYNEENY-EIIAYPTEHG-IPSYAYIFKE 154 Query: 181 V-----------------------------------------------------AYCTDV 187 + AY D Sbjct: 155 IKKPRLDIEKAKKLGVKIGPDLKKLKNGEAVKNIYGEIVKPEDVLLPPKKGFCLAYSGDT 214 Query: 188 NAFPAESL-EKLQ--NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILT 238 P E + L+ D LI +A + H ++ +++ +L + K ILT Sbjct: 215 --IPLEDFGKYLKELGCDVLIHEATFDDFSKDIAKENMHSTIGDAVNIAKLADVKILILT 272 Query: 239 HMHVDLDYDMVLKSTPSRV 257 H+ D + V Sbjct: 273 HISARYDKEEYFNLYKMNV 291 >gi|253681233|ref|ZP_04862031.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] gi|253562471|gb|EES91922.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] Length = 262 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 88/244 (36%), Gaps = 60/244 (24%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N+++++D G + +Q + + ID + TH H DHI G+ L ++ Sbjct: 18 SSGNSSILIDAGLPGKHIEKALQSINKNPNEIDGIFVTHEHIDHIKGVG-----VLSRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---A 161 I +YA K +F++ I+ ++ I K G I+ Sbjct: 73 DIPIYANELTWKSMFKNIG------------------KIKEENIKIIYKKQGITIKDMDI 114 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKN 211 H I +G+ V TD+ F E E +N D +++++ LK Sbjct: 115 FNYSISHDAIDPVGYSIYSGEKKVCIATDLGYFSEEVKENTKNADVVLLESNHDVEMLKF 174 Query: 212 GLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKS 252 G + H S + K + + N KN IL H+ DL Y+ V+ Sbjct: 175 GPYPYSLKKRILSNLGHLSNDDCGKAVVSMTQNNCKNIILGHLSKTNNYPDLAYETVVSV 234 Query: 253 TPSR 256 Sbjct: 235 LRDN 238 >gi|53713580|ref|YP_099572.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis YCH46] gi|60681860|ref|YP_212004.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis NCTC 9343] gi|52216445|dbj|BAD49038.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis YCH46] gi|60493294|emb|CAH08078.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis NCTC 9343] Length = 267 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G ++ + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKSLKDINVTMDSIRAVFITHDHADHIKAVGHL-----GEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + +S+ K Y P+++E+ H Sbjct: 81 TARVHAGINKSYCMTEKLHGSVRYLEKEEPMLLED-------------FRIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---- 216 ++G+ ++ TD+ + + +LII+A L+ G + + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAARYICKAHYLIIEANYDEEMLRMGPYPTYLKE 187 Query: 217 -------HF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H ++ + E I + L H+ D ++ + T Sbjct: 188 RISSKTGHMSNIDTANFLAENIMEHLRYIWLCHLSKDNNHPELAYKT 234 >gi|228906825|ref|ZP_04070694.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 200] gi|228852829|gb|EEM97614.1| Beta-lactamase domain protein [Bacillus thuringiensis IBL 200] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|254167734|ref|ZP_04874584.1| ribonuclease Z [Aciduliprofundum boonei T469] gi|289597097|ref|YP_003483793.1| ribonuclease Z [Aciduliprofundum boonei T469] gi|197623262|gb|EDY35827.1| ribonuclease Z [Aciduliprofundum boonei T469] gi|289534884|gb|ADD09231.1| ribonuclease Z [Aciduliprofundum boonei T469] Length = 308 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 72/291 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P+ +N + + + + ++ D Sbjct: 1 MASTIRIVFFGTGGSW-------------PSPERN--------VMSIGVQIDSEVLLFDC 39 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-RGYFLK-QKRPIDVYAAPDCMK 116 G Q++ + I + TH H DH G+ GL + L +K P+++Y + Sbjct: 40 GEGTQRQMMHTNMSFMKIKRIFITHYHGDHFLGLAGLIQTMTLNERKEPLEIYGPERTID 99 Query: 117 HLFE---------SF----------------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L + SF Y K + + P + + E + I Sbjct: 100 ILTKFLNIGYYSPSFKIVLYELKGNESLDFGDYVVKVMKTKHPVPSLAYAIKEKDMPRID 159 Query: 152 MKSA---GGVIEAIPILQQHGRIS-----------SLGFRFGN-VAYCTDVNAFPAESLE 196 A G + + L+++G+I S G R G + Y D E + Sbjct: 160 RNRAKALGLNSKILEKLRKNGKIEYEGKEITIDEVSNGVRVGRKIVYSGDTAPM-EEMIS 218 Query: 197 KLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 N + LI +A H S ++ K + N +L H+ Sbjct: 219 FAANANVLIHEATVESSLEEQANQYGHSSARQAAKIAKKANVDALLLVHIS 269 >gi|159026349|emb|CAO86438.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 289 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 82/258 (31%), Gaps = 44/258 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V + +I D G + Q L + + ++H H DHI G F++ Sbjct: 32 SCVEMQVGRERLIFDGGTGLRILGQSLMTESPVKAHLFFSHSHWDHIQGFPFFIPAFIR- 90 Query: 103 KRPIDVYAAP----DCMKH-LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +Y P +K L + + P + +E D+ + Sbjct: 91 GNTFKIYGIPSPNGATIKQTLHDQM-----LHPNFPVPLQIMRADLEFYDLEMGETLYCA 145 Query: 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDAL 209 H ++G+R + AY TD FP L Q D +IIDA Sbjct: 146 DFSVETRPLNHPG-EAVGYRVNWQGLSAAYITDTEHFPDRFDDNVLALAQQADVMIIDAT 204 Query: 210 KNGLHSS----------HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVL 250 + H + +++K + K +L H D + + V Sbjct: 205 YTDEEYNDPQYSKVGWGHSTWQQAVKIAQASQVKQLVL--FHHDPAHNDDFLDRIGEQVR 262 Query: 251 KSTPSRVVPAFDGMQFSS 268 K P + A +G+ Sbjct: 263 KIFPETI-LAREGLSIEL 279 >gi|238894845|ref|YP_002919579.1| pyrroloquinoline quinone biosynthesis protein PqqB [Klebsiella pneumoniae NTUH-K2044] gi|238547161|dbj|BAH63512.1| pyrroloquinoline quinone synthesis protein B [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 308 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 100/316 (31%), Gaps = 73/316 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C ++ RT+SS+ +S + V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCANCQ--GLRDGTIQAAPRTQSSIIVSDNGKEW----VLCNASP 58 Query: 63 DFYMQVL------REQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + V I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQIAHTPELNKAGVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F F L R + + I A+PI S Sbjct: 114 VHEDLSTGFP-VFTML--RHWNGGLVHHPIAPQQPFTVDACPDLQFTAVPIASNAPPYSP 170 Query: 174 LGFR---FGNVA-------------YCTDVNAFPAES-LEKLQNLDFLIIDAL------- 209 R NVA Y P E+ L LQ D L+ID Sbjct: 171 YRDRPLPGHNVALFIENRRNGQTLFYAP-GLGEPDETLLPWLQKADCLLIDGTVWQDDEL 229 Query: 210 -------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP----- 254 G H +L + + + + K IL H++ ++ + +P Sbjct: 230 QAAGVGRNTGRDMGHLALGDEHGMMALLASLPAKRKILIHINNTNP--ILNEQSPQRQAL 287 Query: 255 --SRVVPAFDGMQFSS 268 + ++DGM + Sbjct: 288 TQQGIEVSWDGMAITL 303 >gi|119489871|ref|ZP_01622626.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] gi|119454299|gb|EAW35450.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] Length = 295 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 88/262 (33%), Gaps = 45/262 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S + R +I D G + Q L Q+ + +TH H DHI G F+ Sbjct: 35 SCIEMRVGTERLIFDGGTGLRVLGQSLMSQIPVTAHLFFTHAHWDHIQGFPFFTPAFVP- 93 Query: 103 KRPIDVYAA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 K +Y A + L + + P V++ D+ I G Sbjct: 94 KNTFHIYGAVAPNGSTVQQRLNDQM-----LHPNFPVPLQTMGAVMKFFDINIGQTLEIG 148 Query: 158 V-IEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA----ESLEKLQNLDFLIIDA 208 I+ L H ++G+R AY +D FP L +N D LI DA Sbjct: 149 DGIKVETALLNHPG-EAVGYRVNWNGYAAAYVSDTEHFPEGLDDNVLFLARNADVLIYDA 207 Query: 209 LKN-GLHSS---------HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMV 249 + S H + E++K + N K ++ H D + + V Sbjct: 208 TYTDEEYYSEKTSKVGWGHSTWQEAVKVAKAANVKRLVI--FHHDPLHNDDFLDQVGEQV 265 Query: 250 LKSTPSRVVPAFDGMQFSSPIP 271 + P + A +G+ P Sbjct: 266 AQRFP-NSLMAREGLSIQLISP 286 >gi|15894862|ref|NP_348211.1| ribonuclease Z [Clostridium acetobutylicum ATCC 824] gi|15024538|gb|AAK79551.1|AE007668_5 Metal-dependent hydrolase of the beta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] Length = 313 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 89/301 (29%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG SL PT+ +N +SL IS + +++D G Sbjct: 6 LDICLLGCGGSL-------------PTSDRNL---TSLLISY-----NGRKILIDCGEGT 44 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM---KHLF 119 + + + ID + +TH HADH+ G+ GL + ID P + + L Sbjct: 45 QVSMKEIAWGFKDIDVICFTHYHADHVMGLTGLL-LTIANSGRID----PLTIIGPEGLR 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--- 176 E + Y + + + +D + +E + H I L + Sbjct: 100 EVVKGLTVVAPFFPYEIELIELDSKCSDNFLDKVFKIEDVEIFALPVDHS-IECLSYSVR 158 Query: 177 -----RFG-------------------------------------------NVAYCTDVN 188 +F + YCTD Sbjct: 159 VNRKRKFDVNKAKANEVPLKIWNELQRGKEITYENKLYVPDMVLGESRKGIKITYCTDTR 218 Query: 189 AFPAESLEKL-QNLDFLIIDALKNGL-------HSSHFSLSESLKKIELINPKNAILTHM 240 P +SL K D + + + H SE+ + K LTH Sbjct: 219 --PVDSLHKFAYKSDLFVCEGMYGEEEKKEKAVDKKHMIFSEAAGIAKAAEVKELWLTHF 276 Query: 241 H 241 Sbjct: 277 S 277 >gi|228913771|ref|ZP_04077396.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228932482|ref|ZP_04095363.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827172|gb|EEM72925.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228845710|gb|EEM90736.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|229086713|ref|ZP_04218880.1| Ribonuclease Z [Bacillus cereus Rock3-44] gi|228696587|gb|EEL49405.1| Ribonuclease Z [Bacillus cereus Rock3-44] Length = 307 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 64/178 (35%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R SS+ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSSIALQLLEERGE--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + YP ++E + I + +E HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGIVFEDNQFSVETK--RLSHG-IECFGYRI 150 >gi|153955029|ref|YP_001395794.1| ribonuclease Z [Clostridium kluyveri DSM 555] gi|219855470|ref|YP_002472592.1| hypothetical protein CKR_2127 [Clostridium kluyveri NBRC 12016] gi|189043782|sp|A5MZX7|RNZ_CLOK5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808624|sp|B9E3V3|RNZ_CLOK1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|146347887|gb|EDK34423.1| Rnz [Clostridium kluyveri DSM 555] gi|219569194|dbj|BAH07178.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 303 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 96/288 (33%), Gaps = 74/288 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG S+ +P +R +++ +S +++D G + + Sbjct: 6 LLGCGGSMPIP---------------DRNL-TAMIVSYQG-----RKLLIDCGEGTQVSL 44 Query: 69 --LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDC------MKHL 118 L ++ +ID +L+TH HADHI G+ GL R PI + +K + Sbjct: 45 KILGWKIRNIDVILFTHFHADHIAGLPGLLLTIANSGRLEPITIIGPYGLIKIVMGLKVI 104 Query: 119 FESFRY---CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 Y + Y + I V + I+ Sbjct: 105 APVLPYSIELVELHGKEKYFQKIGYFNINILSVDHGIPCFAYSIDVQRNRKFDREKALKN 164 Query: 162 -IPIL---------------QQHGRISSLGF--RFGNVAYCTDVNAFPAESLEKLQNLDF 203 +P++ + + LG+ R ++YCTD + E +E ++ D Sbjct: 165 KVPLIFWSKLQKGEEIKQRDKLYTPDMVLGYGRRGLKISYCTD-SRPSRELVEFVKKSDV 223 Query: 204 LIIDAL---KNGLHS----SHFSLSESLKKIELINPKNAILTHMHVDL 244 I + + H H SE+ + + LTH L Sbjct: 224 FICEGMYGDDEKKHKAISYKHMIFSEAAVIAKEAEVEELWLTHFSPSL 271 >gi|27377496|ref|NP_769025.1| hypothetical protein bll2385 [Bradyrhizobium japonicum USDA 110] gi|27350640|dbj|BAC47650.1| bll2385 [Bradyrhizobium japonicum USDA 110] Length = 282 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 80/269 (29%), Gaps = 57/269 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G P RR ++ I E ++ D G Sbjct: 1 MEVILLGTGG----------------PRPDPRRMATTTLIRLGEE-----NILFDAGRGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLFE 120 +Q+ + V +I+ V TH H DHI + L + +K + +Y PD + + Sbjct: 40 MVQLSKAGVPLGAINTVFLTHHHFDHIGDLYDVMLNSWMHGRKDALRIYGPPDTERLVNT 99 Query: 121 SFRYCFK---ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-------- 169 + DR P + D+ G + L HG Sbjct: 100 LVTQVYDKDITWRDRGEPTFGGWKPVIATDIIPGPVLDTGRWKISAELVSHGDGLDMPPA 159 Query: 170 ---RISSLGFRFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGL--HSSHF- 218 R LG+RF +A D P LE+L + D L+ ++ H Sbjct: 160 FLARWMCLGYRFEAEGKVIAISGDT--VPCPGLERLAEGADLLVQCCFLATPEINNEHLR 217 Query: 219 --------SLSESLKKIELINPKNAILTH 239 K K LTH Sbjct: 218 RLAKFTIACGDTVGKVAAKAGVKKLALTH 246 >gi|293373083|ref|ZP_06619451.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] gi|292631969|gb|EFF50579.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CMC 3f] Length = 267 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 51/229 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKSLKDYNILMDSIRAVFITHDHADHIKAVG-----NLGEKMNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + P+ ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKQEPMTLE----DFHIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + +LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAAHYISKAHYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S S++ + + E + + L H+ D ++ + T Sbjct: 188 RIASKTGHMSNSDTAEFLAENITEHL--RYIWLCHLSKDNNHPELAYKT 234 >gi|41017576|sp|Q97IQ6|RNZ_CLOAB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|325509000|gb|ADZ20636.1| ribonuclease Z [Clostridium acetobutylicum EA 2018] Length = 309 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 89/301 (29%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG SL PT+ +N +SL IS + +++D G Sbjct: 2 LDICLLGCGGSL-------------PTSDRNL---TSLLISY-----NGRKILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM---KHLF 119 + + + ID + +TH HADH+ G+ GL + ID P + + L Sbjct: 41 QVSMKEIAWGFKDIDVICFTHYHADHVMGLTGLL-LTIANSGRID----PLTIIGPEGLR 95 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--- 176 E + Y + + + +D + +E + H I L + Sbjct: 96 EVVKGLTVVAPFFPYEIELIELDSKCSDNFLDKVFKIEDVEIFALPVDHS-IECLSYSVR 154 Query: 177 -----RFG-------------------------------------------NVAYCTDVN 188 +F + YCTD Sbjct: 155 VNRKRKFDVNKAKANEVPLKIWNELQRGKEITYENKLYVPDMVLGESRKGIKITYCTDTR 214 Query: 189 AFPAESLEKL-QNLDFLIIDALKNGL-------HSSHFSLSESLKKIELINPKNAILTHM 240 P +SL K D + + + H SE+ + K LTH Sbjct: 215 --PVDSLHKFAYKSDLFVCEGMYGEEEKKEKAVDKKHMIFSEAAGIAKAAEVKELWLTHF 272 Query: 241 H 241 Sbjct: 273 S 273 >gi|312173719|emb|CBX81973.1| Coenzyme PQQ synthesis protein B [Erwinia amylovora ATCC BAA-2158] Length = 303 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 95/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C +N RT+SS+ +S V+ Sbjct: 1 MKIKVLGSAAGGGFPQWNCYCPNCQ--GVRNGSIRATARTQSSIAVSDNGSDW----VLC 54 Query: 59 DTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ L I +++ T DH G+ L++ P V+ Sbjct: 55 NASPDICHQIAANPELHRQGKLRGSGIGSIILTDSQIDHCTGL-----LNLREGCPHHVW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ L F F L + + I+ AIPIL Sbjct: 110 CTPEVHADLTSGFP-IFTMLQH--WNGGLVHHAIQLAQPFSVAVCPALRFTAIPILSNAP 166 Query: 170 RISSLGFR----------FGNVA------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 S R N A Y + A+ L+ + D L++D Sbjct: 167 PYSPYRGRPLPGHNIALMIENTASGSKLLYAPGLGEPDAQLLDLMSQADCLLVDGTLWQD 226 Query: 210 ----------KNGLHSSHFSLSE---SLKKIELINPKNAILTHMHVD---LDY--DMVLK 251 G H +L E + + + IL H++ LD L Sbjct: 227 NELANTGVGRNTGRDMGHLALDEDRGLMALLGDLPAPRKILIHINNTNPILDESSAERLA 286 Query: 252 STPSRVVPAFDGMQFSS 268 + + ++DGM Sbjct: 287 LSARGIEVSYDGMSIEL 303 >gi|300865566|ref|ZP_07110345.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] gi|300336438|emb|CBN55495.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] Length = 301 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 84/256 (32%), Gaps = 36/256 (14%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQ 102 V R +I D G + Q L Q+ + +TH H DHI G + Sbjct: 35 CVEMRVGTHRLIFDGGTGLRVLGQSLLSQMPVEAYMFFTHSHWDHIQGFPFFVPAFVKCN 94 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I A + + + P + ++ ND+ I G I+ Sbjct: 95 SFRIHG-AIAPNGATIQQRLNDQMLHPN-FPVPLQIMGADLKFNDIEIGQPVEIGDIKVE 152 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDALK---- 210 L H ++G+R AY TD FP L +N D LI DA Sbjct: 153 NALLNHPG-EAVGYRVNWQGYAAAYVTDTEHFPDRLDENVLFLARNADVLIYDATYTDEE 211 Query: 211 ------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVLKSTPS 255 + H + E++K + N K ++ H D + + V + P Sbjct: 212 YYSEKSPKVGWGHSTWQEAVKVAKAANVKKLVI--FHHDPLHNDDFLDRIGEQVAQKFPD 269 Query: 256 RVVPAFDGMQFSSPIP 271 ++ A +G+ P Sbjct: 270 SLM-AREGLSIQLVPP 284 >gi|222094815|ref|YP_002528875.1| hypothetical protein BCQ_1153 [Bacillus cereus Q1] gi|221238873|gb|ACM11583.1| conserved hypothetical protein [Bacillus cereus Q1] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFQSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTIH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|121610951|ref|YP_998758.1| pyrroloquinoline quinone biosynthesis protein PqqB [Verminephrobacter eiseniae EF01-2] gi|121555591|gb|ABM59740.1| coenzyme PQQ biosynthesis protein B [Verminephrobacter eiseniae EF01-2] Length = 304 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 104/313 (33%), Gaps = 63/313 (20%) Query: 7 FTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + CD + RT+SS+ +S ++V+ P Sbjct: 4 LRVLGSAAGGGFPQWNCNCFNCDGLRRGVIAASARTQSSIALSEDGVHW----LLVNASP 59 Query: 63 DFYMQ---------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q + I AVL DH G+ LR + + + VYA P Sbjct: 60 DILAQIRATPALQPARAARDTGIVAVLLVDAQIDHAAGLLMLR----EHRSALPVYATPA 115 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAI------PILQ 166 ++ L E F ++ + + + P C+ G + AI P Sbjct: 116 VLQDLAEGFP----LTRILSHYCRLQAHPLALDASPFCVPPLTGLRLHAIALDSKPPPYS 171 Query: 167 QH----GRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIID---------- 207 H R ++G R V Y + +L D +++D Sbjct: 172 PHRAAPQRGDNIGLRIVSASGKRVFYAPGLGHMTPHVQAELAQADVILVDGSFWSDDEMQ 231 Query: 208 --ALKNGLHSSHFSLSES-----LKKIELINPKNAILTHMH----VDLDYDMVLKSTPSR 256 L L++S + ++ + IL H++ + +D + + Sbjct: 232 RLGLSPQSARDMGHLAQSGPQGMIAALDQVPAARKILIHINNTNPILVDDAPERRELAAH 291 Query: 257 -VVPAFDGMQFSS 268 + A DGM+ + Sbjct: 292 GIEVAHDGMEIAL 304 >gi|52144224|ref|YP_082604.1| metal-dependant hydrolase [Bacillus cereus E33L] gi|51977693|gb|AAU19243.1| conserved hypothetical protein; metal-dependant hydrolase [Bacillus cereus E33L] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|71028816|ref|XP_764051.1| hypothetical protein [Theileria parva strain Muguga] gi|68351005|gb|EAN31768.1| hypothetical protein TP04_0416 [Theileria parva] Length = 500 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 63/257 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G S VP + R S +++D G Sbjct: 263 KLTFLGTGCS--VPSVY---------------------------RNSFVAILLDCGEGTV 293 Query: 66 MQVLR---------EQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDC 114 +Q+L +++ SI V +H HADH G+ L + P + A Sbjct: 294 LQMLLISNSFDDFIDKISSIRLVFISHSHADHHLGLYHLISLRNKFNSQGPKPLIIASHN 353 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 +++ + F D +V+ V ++ + H S Sbjct: 354 IRYWLKEFENICHLDYD--------FMVLTEESVQFTVER---TLRLSFFKVDH-IEDSY 401 Query: 175 GFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESL 224 G R ++ Y D ++ +N++FLI +A ++ H ++S+++ Sbjct: 402 GIRIDYEFWSLVYSGDTKPC-DNLIKHCENVNFLIHEATFTDEYAENAMKTLHSTVSQAI 460 Query: 225 KKIELINPKNAILTHMH 241 + N + LTH Sbjct: 461 EVAAQCNVETLFLTHFS 477 >gi|329911255|ref|ZP_08275463.1| Coenzyme PQQ synthesis protein B [Oxalobacteraceae bacterium IMCC9480] gi|327545976|gb|EGF31064.1| Coenzyme PQQ synthesis protein B [Oxalobacteraceae bacterium IMCC9480] Length = 304 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 91/317 (28%), Gaps = 66/317 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ + C + RT+SS+ +S V+++ Sbjct: 1 MKIRILGSAAGGGFPQWNCNCFNCSGVRDGSIRATARTQSSITVSDNGTDW----VLINA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AVL DH+ G+ LR ++ P+ +YA Sbjct: 57 SPDILRQLSLAPALQPARAIRDSGICAVLLMDAQIDHVTGLLMLR----ERSSPLPLYAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ----- 166 L L V I + P + I P+ Sbjct: 113 EQVFADLSTGLP-IASVLGHYCG---VERHTITPDGQPFVID-PLTQIRFTPLTLSSKAP 167 Query: 167 ---QHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIID------ 207 H G G V Y + + + D L++D Sbjct: 168 PYSPHRNDPHPGDNIGLMITSQSSGKRVFYAPGLGEMTPAITSAMASADVLLVDGTFWTE 227 Query: 208 ------ALKNGLHSSHFSLSES-----LKKIELINPKNAILTHMHVDL-----DYDMVLK 251 L S+ L +S + ++ + IL H++ D Sbjct: 228 DEMITLGLSKKPASAMGHLPQSGPGGMIAILDTMPASRKILIHINNSNPILREDSAERAV 287 Query: 252 STPSRVVPAFDGMQFSS 268 T + A DGM+ Sbjct: 288 LTQHGIELAIDGMEIQL 304 >gi|268610791|ref|ZP_06144518.1| metallo-beta-lactamase family protein [Ruminococcus flavefaciens FD-1] gi|268611697|ref|ZP_06145424.1| metallo-beta-lactamase family protein [Ruminococcus flavefaciens FD-1] Length = 261 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 83/238 (34%), Gaps = 58/238 (24%) Query: 52 SNTTVIVDTGPDF-YMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G F + E + ++ AV TH H+DH+ G+ + K + Sbjct: 21 EKGGILIDCGVSFKRLSAALEINNIPLSAVQAVFITHEHSDHVAGL---KMLTKKTG--M 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY ++ L + + P+++ I + AG + Sbjct: 76 PVYGQKRTLQRLCD-------SDKISPDSPVIDM-------TGIAINCAGSEVRC--FNT 119 Query: 167 QHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H I S G+R A CTD+ E E L ++++A L+ G + Sbjct: 120 PHDTIQSCGYRIHTDDDKLCAVCTDLGHITPEVDEALTGCRLVLLEANYDDYMLRTGPYP 179 Query: 216 -----------SHFSLS----ESLKKIELINPKNAILTHMHV-----DLDYDMVLKST 253 H S ++ K +E + IL H+ D+ Y+ V K+ Sbjct: 180 LYLKERILSVNGHLSNDDSGIQAAKLVER-GTTHIILGHLSQDNNRPDIAYNTVQKAL 236 >gi|196044377|ref|ZP_03111613.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196025016|gb|EDX63687.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLITEAKQIFSGHITLAHSGYVWNS 244 >gi|229131992|ref|ZP_04260855.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST196] gi|228651392|gb|EEL07364.1| Beta-lactamase domain protein [Bacillus cereus BDRD-ST196] Length = 242 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 23 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSVTKGQ 82 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y + D+ + + + + G Sbjct: 83 LPELPIYG----------------HSFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 126 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 127 FLKTVH-PVTCFAMRITAGSDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 184 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 185 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 242 >gi|330948178|gb|EGH48438.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 85 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 190 FPAESLEKLQN--LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 P ++ E L+ L+ L++D + +H L+ +L+ IE + P A+LTH+ L Sbjct: 1 LPDDTREYLRRAPLNLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTL 60 Query: 245 DYDMVLK--STPSRVVPAFDGMQF 266 D ++ P VV D M Sbjct: 61 DAWLMEHSGQLPGNVVVGRDEMSV 84 >gi|17232644|ref|NP_489192.1| ribonuclease Z [Nostoc sp. PCC 7120] gi|41017571|sp|Q8YLZ0|RNZ_ANASP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|17134290|dbj|BAB76851.1| alr5152 [Nostoc sp. PCC 7120] Length = 322 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 61/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RARNVSSVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR +V + + TH H DHI G+ GL +D+Y ++ Sbjct: 42 QHQILRSDLKVSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVQRVDIYGPSGLNDYIQS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + RY + +YP I+ + V + L H RI++ G+R Sbjct: 102 ASRY---SHTHFSYP-------IKVHTVRPGVIYENDEFTVTCGLLHH-RITAFGYRV 148 >gi|196248795|ref|ZP_03147495.1| ribonuclease Z [Geobacillus sp. G11MC16] gi|196211671|gb|EDY06430.1| ribonuclease Z [Geobacillus sp. G11MC16] Length = 306 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 101/324 (31%), Gaps = 78/324 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 1 MELLFLGTGA--GVP-----------AKERNV---SSIALQLLEERGA--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA----PDCMK 116 Q+L + I+ + TH H DH+ G+ GL G F + P+ V+ Sbjct: 43 QHQILHTAIRPRRIEHIFITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRQFVET 102 Query: 117 HLF---ESFRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 L RY + D + + M S G + + +P R Sbjct: 103 ALTVSGTRLRYELNIAEIDEGVIFDDERFSVTAKRLDHGMPSYGFRVAEKDLPGPLLVDR 162 Query: 171 ISSLGFRFGNV---------------------------------AYCTDVNAFPAESLEK 197 + +LG R G + A D F ++E Sbjct: 163 LKALGVRPGPIYQQIKQGKTVVLEDGTVLDGREFVGPPQKGRIVAVLGDT-RFCEAAIEL 221 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 D +I +A + H + +++ + + K ILTH+ + LK Sbjct: 222 AHEADVVIHEATFAAAEQRLARDYFHSTTTDAAEVAKRAGAKRLILTHISSRYQGEAALK 281 Query: 252 STPS------RVVPAFDGMQFSSP 269 A D FS P Sbjct: 282 LLEEARRVFPNTELAADFASFSIP 305 >gi|167031424|ref|YP_001666655.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas putida GB-1] gi|189037406|sp|B0KJ69|PQQB_PSEPG RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|166857912|gb|ABY96319.1| coenzyme PQQ biosynthesis protein B [Pseudomonas putida GB-1] Length = 303 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 90/318 (28%), Gaps = 69/318 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S V+ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLRATARTQSSIALSDDGVHW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIEACPNLKFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + + D L++D Sbjct: 169 SPHRFDPHPGDNLGLLVEDTRTGGKLFYAPGLGQVDGKLLAMMHDADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHV-----DLDYDMVL 250 + G H + E L + +L H++ D D Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFSR---QRKVLIHINNTNPILDEDSPERA 285 Query: 251 KSTPSRVVPAFDGMQFSS 268 + V AFDGM Sbjct: 286 EVLRRGVEVAFDGMSIEL 303 >gi|239828684|ref|YP_002951308.1| beta-lactamase [Geobacillus sp. WCH70] gi|239808977|gb|ACS26042.1| beta-lactamase domain protein [Geobacillus sp. WCH70] Length = 264 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 49/231 (21%) Query: 52 SNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G Q+ + + + A+L TH H+DHI G+ + +K + Sbjct: 22 GQQRLLVDAGLSGKQLEQLFEQIDRDLRDLTAILVTHEHSDHIKGLG-----VIARKYKL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA K + I + + P+ + G ++ Sbjct: 77 PIYANEKTWKAMEGL---------------IGDIPTEQKFIFPLGKVRSFGDLDVESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD ++N D I ++ L+ G + Sbjct: 122 SHDAAEPMFYVFYHEGKKLALITDTGYVSDRMKGTIKNADVFIFESNHDVEMLRMGKYPW 181 Query: 216 ----------SHFSLSES-LKKIELIN--PKNAILTHMHVDLDYDMVLKST 253 H S E+ L ++I K L H+ D + + + T Sbjct: 182 NVKRRILSDVGHVSNEEAGLALADVIGDRTKRIYLAHLSQDNNIKELARMT 232 >gi|302871255|ref|YP_003839891.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574114|gb|ADL41905.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 265 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 92/264 (34%), Gaps = 66/264 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM--QVLREQV---LSIDAVLYTHPHADHI--HGID 93 S+ IS +TT+IVD G F Q L E++ IDA+L +H H+DH+ GI Sbjct: 18 SILISY-----KDTTIIVDAGVSFKKLVQAL-EKIGFNKKIDAILLSHDHSDHVKCAGI- 70 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 +K + + + + F D +Y ++ Sbjct: 71 ------YFRKLNVPIITNHKTWESIKR-----FLGKVDESYVKLIET----------GTS 109 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 + G I H +GF F V+ CTDV + D +++++ Sbjct: 110 FSVGSIGVDTFSIPHDASDPMGFCFYVKNKKVSICTDVGHVNDSVATMIDFSDIILLESN 169 Query: 209 -----LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMV 249 L G + H S ++ + I +N K L H+ + ++ V Sbjct: 170 HDVEMLMFGPYPYHLKQRIKSDKGHLSNEQAAQMILKLNLERTKRIYLGHLSEENNHPDV 229 Query: 250 LKST------PSRVVPAFD-GMQF 266 T V +FD G++ Sbjct: 230 ALMTVKSILKEKGVFDSFDFGLEV 253 >gi|75908338|ref|YP_322634.1| beta-lactamase-like protein [Anabaena variabilis ATCC 29413] gi|75702063|gb|ABA21739.1| Beta-lactamase-like protein [Anabaena variabilis ATCC 29413] Length = 298 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 85/253 (33%), Gaps = 44/253 (17%) Query: 52 SNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +I D TG Q L Q+ + +TH H DH+ G F+K +Y Sbjct: 41 AGKRLIFDGGTGLHVLGQSLLRQMPIEAYLFFTHSHWDHMQGFPFFVPGFVK-GNNFHIY 99 Query: 110 AA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 A + L + + P + + +DV + I Sbjct: 100 GAIAPDGSTVEQRLNDQM-----LHPNFPVPLQIMQANLHFHDVQPGLPIHINDITVETA 154 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAE----SLEKLQNLDFLIIDA--LKNGLH 214 H ++G+R G Y TD FP + L+ +N D LI D+ H Sbjct: 155 ALNHPG-EAVGYRINWRGGAAVYITDTEHFPDKLDENVLKLAKNADILIYDSTYTDEEYH 213 Query: 215 SS--------HFSLSESLKKIELINPKNAILTHMHVDLDYD---------MVLKSTPSRV 257 S+ H + E++K + N K ++ H D +D S Sbjct: 214 SAKSPRIGWGHSTWQEAVKIAKAANVKTLVI--FHHDPAHDDDFLDQIGAQAFAQF-SGA 270 Query: 258 VPAFDGMQFSSPI 270 + A +GM P+ Sbjct: 271 IMAREGMVLQVPV 283 >gi|57641049|ref|YP_183527.1| ribonuclease Z [Thermococcus kodakarensis KOD1] gi|73917868|sp|Q5JE70|RNZ_PYRKO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|57159373|dbj|BAD85303.1| ribonuclease Z [Thermococcus kodakarensis KOD1] Length = 314 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 37/175 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G G+ PT +N + ++ R ++ D G Q+ Sbjct: 6 FLGTG---GI----------MPTRERN--------VPAIALRYKGEIILFDAGEGTIRQM 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 ++ +D + TH H DH GI L +++P+ +Y + + Sbjct: 45 NTAKLSPMKVDKIFITHFHGDHYLGIPALIQTMNLWDRQKPLHIYGPKYTFQFVQN---- 100 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L+ + P + V E + + G E +HG I +LG+ F Sbjct: 101 ---LLNSGFFRPGFDIHVHELGETRLKF----GDYEIWSFKVEHG-IPALGYVFK 147 >gi|218261560|ref|ZP_03476326.1| hypothetical protein PRABACTJOHN_01993 [Parabacteroides johnsonii DSM 18315] gi|218223953|gb|EEC96603.1| hypothetical protein PRABACTJOHN_01993 [Parabacteroides johnsonii DSM 18315] Length = 267 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 82/227 (36%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFYM--QVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G +VL+++ I AVL TH HADHI L +K I VY Sbjct: 26 VLIDAGIGIRTIKKVLKDKAIDFSKIIAVLITHDHADHI-----KTVGCLGEKHCIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +S + ++++ +V + +VP ++ H Sbjct: 81 TEAVHRGINKS-----RYVEEK----LVGSRKVIEKEVPFMIR----DFRITAFEVPHDS 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---- 216 ++G+ TDV + + + LII+A LK G + + Sbjct: 128 TDNVGYYIEYGDHKFTLATDVGHITETVCKYMSMANHLIIEANYDEEMLKFGTYPAFLKE 187 Query: 217 -------HFSLSESLKKIE---LINPKNAILTHMHVDLDYDMVLKST 253 H S E+ + + K+ L H+ D ++ + T Sbjct: 188 RVASSTGHLSNREAAEFLATHYDPKLKDIWLCHLSRDNNHPELAYKT 234 >gi|72162765|ref|YP_290422.1| hypothetical protein Tfu_2366 [Thermobifida fusca YX] gi|71916497|gb|AAZ56399.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 268 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 37/210 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G + R + +IDAV +H HADH +D + + P Sbjct: 41 EADGFRLLLDLGNGALSTLQRHVDMYTIDAVYLSHLHADHC--LDLCPYWVARTYHPDGP 98 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG----GV 158 I VY + +++ ++P S G G Sbjct: 99 RPRIPVYGPTGVADRMAQAYG--------------LDPHPGMRETFDFRELSPGTFRIGP 144 Query: 159 IEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----K 210 A H I + G R + + Y D A +E ++ D + +A + Sbjct: 145 FTATVDHVNH-PIEAFGIRLEHNGAVLTYSGDTGACSEL-VELARDADLFLCEASFHDHR 202 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHM 240 H + SE+ ++ N + +LTH+ Sbjct: 203 EHPKDMHLTGSEAGEQATRANARRLLLTHL 232 >gi|257453015|ref|ZP_05618314.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|257467425|ref|ZP_05631736.1| metal dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|315918549|ref|ZP_07914789.1| Zn-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|317059555|ref|ZP_07924040.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313685231|gb|EFS22066.1| Zn-dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313692424|gb|EFS29259.1| Zn-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 259 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 78/244 (31%), Gaps = 61/244 (25%) Query: 56 VIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + + +I A+L TH H DHI G L +K + +Y Sbjct: 24 ILIDAGFSCKKIEERLASIGKSAENIKALLITHEHTDHISG-----AGILARKYNLPIYI 78 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 +P+ ++ + + I + I P H Sbjct: 79 SPESLEVCRQKLG-------------KIAEDQIHCIQKDFFLNE---NIYVKPFDVMHDA 122 Query: 171 ISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII----------DAL------ 209 + +LGF +A TD+ E Q++D I+ + Sbjct: 123 VRTLGFHIETASQKKLAISTDIGYITNLVREAFQDVDVAILESNYDYNMLMNCSYPWDLK 182 Query: 210 -KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 + + H S +++ K I + + L H+ D ++ ++ D M+ Sbjct: 183 ARVKGRNGHLSNNDAAKFIREMYTNKLQKIFLAHVSKDSNH--------PNII--HDTME 232 Query: 266 FSSP 269 Sbjct: 233 LEFE 236 >gi|146086719|ref|XP_001465624.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069723|emb|CAM68049.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 466 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 13/94 (13%) Query: 55 TVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------- 102 +++D G F ++R + ++D +L TH HAD + G+D LR Sbjct: 140 HILIDCGKTFRDAYFKVMIRCNIRTVDTLLLTHGHADAVAGLDDLRDLQTMHMVSTGDWV 199 Query: 103 -KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + Y +P +K L +S Y + + Sbjct: 200 IDSFVPTYLSPSTLKTLEKSVDYIIRNSVKSGHA 233 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 44/179 (24%) Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-ISSLGFRFGN------------- 180 P+ + I A + +HG+ S+ + FG Sbjct: 287 RPLRMHLPITATAATAGGTDAASDLPFYSFPVEHGKGYVSMAWVFGRGTAFKSRQTQQQG 346 Query: 181 --------VAYCTDVNAFPAESLEKLQNL---DFLIIDALKN--GLHSSHFSLSESLKKI 227 V Y +DV+ PA S+ LQ+L D L +D L + H+ + + Sbjct: 347 QQQEEGSCVVYISDVSHIPATSMAFLQDLVKIDVLFVDCLSPSGRVSPVHYCEDGMMDLV 406 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSR-----------------VVPAFDGMQFSSP 269 + P++ MH L++ + V ++DGMQ P Sbjct: 407 VALKPRHVFGVGMHCALEHFKWMAELQKALGSQVAAGHLRAGEVQCVELSYDGMQVLLP 465 Score = 40.5 bits (94), Expect = 0.26, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Query: 7 FTILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKIS 45 T++G G S+GVP I + DP+ P N R SL I+ Sbjct: 27 LTVVGSGVSIGVPVIGHLGLGCACEHAVADPSGP-NCRNNISLLIT 71 >gi|237741842|ref|ZP_04572323.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13] gi|229429490|gb|EEO39702.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13] Length = 260 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRAGAAKLG-------------EIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|254303289|ref|ZP_04970647.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323481|gb|EDK88731.1| beta-lactamase superfamily metal-dependent hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 260 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRA-------------GAVKLGEIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCSYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|30019240|ref|NP_830871.1| metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|229126495|ref|ZP_04255509.1| Beta-lactamase domain protein [Bacillus cereus BDRD-Cer4] gi|29894783|gb|AAP08072.1| Metal-dependent hydrolase [Bacillus cereus ATCC 14579] gi|228656884|gb|EEL12708.1| Beta-lactamase domain protein [Bacillus cereus BDRD-Cer4] Length = 244 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|19704235|ref|NP_603797.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714463|gb|AAL95096.1| Metal dependent hydrolase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 260 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRA-------------GAVKLGEIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNRKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCAYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTDKLKKVFLAHVSKD 220 >gi|321472773|gb|EFX83742.1| hypothetical protein DAPPUDRAFT_301666 [Daphnia pulex] Length = 738 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 108/297 (36%), Gaps = 65/297 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G+ C P +N S + + +R +++D G Y Sbjct: 419 RVTFLGTGS-------------CIPNKTRNT---SGILVELEKDR----FILMDCGEGTY 458 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--------DVY 109 Q++R + ++ V +H HADH G+ G ++ I V+ Sbjct: 459 GQIVRFFGHEKAAHVLSNLVGVYISHLHADHHIGL---IGLLQGRQHAIERTRSDAGPVW 515 Query: 110 A-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-AIPILQQ 167 AP + +++ + F+ + R Y + + + + + P G ++ + + Sbjct: 516 LIAPHQINFWLKTYHHSFERI--RQYYKLFSCVNLFEKEKPDPALLTGLNLKSIVTTYVR 573 Query: 168 HGR-------ISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------L 213 H ++ GF+ + Y D P ++ ++ D LI +A Sbjct: 574 HCPSAFGVSLTTADGFK---LTYSGDT--MPCLGLIDIGRDSDLLIHEATMEDGMEEEAK 628 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKSTPSRVVPAFDGMQFS 267 +H ++S++++ + K +LTH + + + + AFD M S Sbjct: 629 MKTHSTISQAIEVGRSMGAKFTLLTHFSQRYSKIPIFNEKAFSSNTIGVAFDNMTIS 685 >gi|312793305|ref|YP_004026228.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180445|gb|ADQ40615.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 240 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 35/235 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R ++++ G ++L I ++ +H HADH + LR Y + + ID+ Sbjct: 25 RTKEANILLECGSGVLTRLLNFISFDEISFIICSHLHADHYSDLGVLRYYLASRGKEIDL 84 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + K D + IENN M++ G + + QH Sbjct: 85 FIPSE------------PKEEYDLIRKGVYRVKEIENN-----METRIGNLTIKFLEGQH 127 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN--------GLHSS 216 S R + D F E +E ++ D +++++ Sbjct: 128 -PYKSFAVRIEEDGKVFGFSGDT-GFKEELIEFFKDADVILLNSAYTDKEVEKIAPEKRF 185 Query: 217 HFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 H S ++ + + N K +LTH+ + ++ M K VV A D Sbjct: 186 HMSPKQAAEIAKKANAKLLVLTHLKPECNEKEHLMSAKEVFENVVLATDNETIEF 240 >gi|257888450|ref|ZP_05668103.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257824504|gb|EEV51436.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] Length = 247 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 23/213 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G +++ L +DAV+ +H H DHI + L+ Y+ + Sbjct: 26 QSDGFNLLIDAGSATLIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR--- 82 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ + ++ D + + V + + + G + H Sbjct: 83 --DPETLLSIYG------HTKDSVHFEELTMANVSKGHPYFEAEELKIGPFLITFMETIH 134 Query: 169 GRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFS 219 + R + D + + + + D + DA N H +HF+ Sbjct: 135 -PVVCYAMRIVEEATGKVFVFTGD-SGYLESFADFAKEADLFLADAYLFEGNEHHHAHFT 192 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 E+ + + N K +LTH+ D + + Sbjct: 193 SKEAGELAKSANVKKLVLTHLPQFGDLEQLKNE 225 >gi|325845763|ref|ZP_08169027.1| metallo-beta-lactamase domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481901|gb|EGC84932.1| metallo-beta-lactamase domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 263 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 54/245 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLR---EQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + +++D G +L E +DA+ TH H DH+ G Sbjct: 15 SVFVEHKGSK-----ILIDCGFSGRKIENLLSQIGENPSDLDAIFLTHEHMDHVKG---- 65 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ I +YA ++ + I+ + Sbjct: 66 -AGVISRRYDIPIYANKGTWLSFIKN-------------AGKLKEENIKIFRSNSFLNF- 110 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------ 205 + PI H +GF + TD L +++ D Sbjct: 111 -NSFDIFPISIHHDANEPVGFILYLDNKKITVLTDTGIIDDRILNEIKGSDVYYFEANHD 169 Query: 206 IDALKNGLHS-----------SHFSLSESLK-KIELINPK--NAILTHMHVDLDYDMVLK 251 +DALK G ++ H S +S K + + K L H+ + + + K Sbjct: 170 LDALKRGPYTYPMKVRIMGKMGHLSNDQSAKILADALQGKNEKIFLAHLSETNNSEELCK 229 Query: 252 STPSR 256 T Sbjct: 230 ITVDN 234 >gi|41019477|sp|Q58897|RNZ_METJA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 317 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 93/319 (29%), Gaps = 97/319 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA+ VP KNR I + G + D G + Sbjct: 4 MKLIFLGTGAA--VP-------------SKNRN-----HIGIAFKFGGEV-FLFDCGENI 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L +V I+ + TH H DHI GI GL F +++ + ++ + + Sbjct: 43 QRQMLFTEVSPMKINHIFITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIEN 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S + Y + PI + E I +HG I S + F Sbjct: 103 SLK------LGTHYIEFPIKVYEIYTKEPITIYKEENY-EIIAYPTEHG-IPSYAYIFKE 154 Query: 181 V-----------------------------------------------------AYCTDV 187 + AY D Sbjct: 155 IKKPRLDIEKAKKLGVKIGPDLKKLKNGEAVKNIYGEIIKPEYVLLPPKKGFCLAYSGDT 214 Query: 188 NAFPAESL-EKLQ--NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILT 238 P E + L+ D LI +A + H ++ +++ +L N K ILT Sbjct: 215 --LPLEDFGKYLKELGCDVLIHEATFDDSAKDAAKENMHSTIGDAVNIAKLANVKALILT 272 Query: 239 HMHVDLDYDMVLKSTPSRV 257 H+ D + V Sbjct: 273 HISARYDKEEYFNLYKMNV 291 >gi|297160093|gb|ADI09805.1| hypothetical protein SBI_06685 [Streptomyces bingchenggensis BCW-1] Length = 250 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEA-----DGYRLLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +D+V +H H DH ID + + R I VY + Sbjct: 40 LGELQRHCGLYDLDSVFLSHLHPDHC--IDMCAYFVARYYRHDGGRAEAIPVYGPEGTER 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ D+++ + + + + G H + + GF Sbjct: 98 RLVRAYE---DVPDEKSMQEVFDFRTLTPGTFTL------GPFTIRTARVCH-PVEAFGF 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++ Y D ++ + D + +A K + H + ++ + Sbjct: 148 RIEHEGRSLVYSGDTGPC-EALVDLARGADLFLCEAAFTHGKEDIPELHLNGRQAGEHAR 206 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 207 RAGVGTLVLTHI 218 >gi|291539654|emb|CBL12765.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Roseburia intestinalis XB6B4] Length = 265 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 37/179 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQK 103 V++D G + + SID VL TH H DHI G+ + ++ Sbjct: 20 DENHVLIDAGISGKR---IENGLNSIDLKTEEMQGVLVTHEHIDHISGLG-----VIARR 71 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + +++ + I D P + G + P Sbjct: 72 YGLPIYATQGTIDAILNTKS--VGKIEESLFHAI-------TPDQPFEI----GDLLIEP 118 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 I H + ++ N A TD+ + ++K++NLD L+++A H H Sbjct: 119 ISISHDAADPVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEA----NHDVHM 173 >gi|160884570|ref|ZP_02065573.1| hypothetical protein BACOVA_02555 [Bacteroides ovatus ATCC 8483] gi|237718568|ref|ZP_04549049.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|260174894|ref|ZP_05761306.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. D2] gi|299145869|ref|ZP_07038937.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_23] gi|315923138|ref|ZP_07919378.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156110309|gb|EDO12054.1| hypothetical protein BACOVA_02555 [Bacteroides ovatus ATCC 8483] gi|229452028|gb|EEO57819.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298516360|gb|EFI40241.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_23] gi|313697013|gb|EFS33848.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 51/229 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKSLKDYNILMDSIRAVFITHDHADHIKAVG-----NLGEKMNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + P+ ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKQEPMTLE----DFHIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + +LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAAHYISKAHYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S S++ + + E + + L H+ D ++ + T Sbjct: 188 RIASKTGHMSNSDTAEFLAENITEHL--RYIWLCHLSKDNNHPELAYKT 234 >gi|292656881|ref|YP_003536778.1| metal dependent hydrolase [Haloferax volcanii DS2] gi|291371358|gb|ADE03585.1| metal dependent hydrolase [Haloferax volcanii DS2] Length = 248 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 88/285 (30%), Gaps = 58/285 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R ++ L + ++VD G Sbjct: 1 MRVTFLGTGSAM--PVTG--------------RAQTGLLLE-----SDGNALLVDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHLFES 121 ++ +V + +VL TH H DH+ + L +++ + + Sbjct: 40 LARLAETEVGYEGVSSVLLTHHHLDHVSDLMALVKARWLAGADSLEIVGPEGTEELVEGL 99 Query: 122 FRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F D Y ++ + E + + + +H + +L +RF N Sbjct: 100 F-------DVHDYLRGRLDIQIREVGPTEFGIAG----FDVMGFEVRHS-MPTLAYRFSN 147 Query: 181 ------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIEL 229 + D AF A + L D H + + E+L ++ Sbjct: 148 ERGEADFVFSGDTEAFSAL-GDFADGASVLAHDCSFPDDVDVSNHPTPSQVGEALAGRDI 206 Query: 230 INPKNAILTHMHVDLD------YDMVLKSTPSRVVPAFDGMQFSS 268 + LTH++ D V + V A DG+ Sbjct: 207 ---DSVYLTHLYPHADRVTDDLRASVSEQFDGEVRVAEDGLVVEL 248 >gi|295101698|emb|CBK99243.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Faecalibacterium prausnitzii L2-6] Length = 263 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 74/225 (32%), Gaps = 53/225 (23%) Query: 50 RGSNTTVIVDTGPDFYMQ--VLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +IVD G L+E + D +L TH H+DH+ G+ +K Sbjct: 19 RCGERYLIVDMGKGVRTTGAALKELELNISDCDGILVTHEHSDHVKGLS-----TFLKKY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ VY A + ++ L + P + + + GV Sbjct: 74 PLPVYGAEETLEFL----------DANGVIPASCDLTALTPGR-----EEDIGVFGVKAF 118 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + +G+R + TD+ E L D + +++ L++G Sbjct: 119 PTSH-DVPCVGYRIHTPDEKTMTIATDLGVLTPAVHEALSGCDLVALESNYDLHMLRSGP 177 Query: 214 HS-----------SHFSLSES----LKKIELINPKNAILTHMHVD 243 + H S E L+ I+ K L H+ + Sbjct: 178 YPYYLRARIESVRGHLSNDECAAKLLELIQE-GCKKFALCHLSQE 221 >gi|206971168|ref|ZP_03232119.1| ribonuclease Z [Bacillus cereus AH1134] gi|229081399|ref|ZP_04213902.1| Ribonuclease Z [Bacillus cereus Rock4-2] gi|229180422|ref|ZP_04307765.1| Ribonuclease Z [Bacillus cereus 172560W] gi|229192354|ref|ZP_04319318.1| Ribonuclease Z [Bacillus cereus ATCC 10876] gi|206733940|gb|EDZ51111.1| ribonuclease Z [Bacillus cereus AH1134] gi|228591134|gb|EEK48989.1| Ribonuclease Z [Bacillus cereus ATCC 10876] gi|228603169|gb|EEK60647.1| Ribonuclease Z [Bacillus cereus 172560W] gi|228702021|gb|EEL54504.1| Ribonuclease Z [Bacillus cereus Rock4-2] Length = 307 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 94/301 (31%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPIC--------MKSAGGVI----EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI ++ G I E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEAVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|196036485|ref|ZP_03103881.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228944814|ref|ZP_04107177.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195990959|gb|EDX54931.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|228814842|gb|EEM61100.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLIMSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|30261204|ref|NP_843581.1| hypothetical protein BA_1088 [Bacillus anthracis str. Ames] gi|47526362|ref|YP_017711.1| hypothetical protein GBAA_1088 [Bacillus anthracis str. 'Ames Ancestor'] gi|49184037|ref|YP_027289.1| hypothetical protein BAS1016 [Bacillus anthracis str. Sterne] gi|165871834|ref|ZP_02216477.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167635358|ref|ZP_02393672.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|167640192|ref|ZP_02398458.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|170688074|ref|ZP_02879286.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|170707677|ref|ZP_02898129.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|177654171|ref|ZP_02936144.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190566596|ref|ZP_03019513.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227816062|ref|YP_002816071.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228926238|ref|ZP_04089313.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229601914|ref|YP_002865631.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254682736|ref|ZP_05146597.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254734153|ref|ZP_05191866.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254740203|ref|ZP_05197895.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254753542|ref|ZP_05205578.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254758640|ref|ZP_05210667.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|30254818|gb|AAP25067.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47501510|gb|AAT30186.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177964|gb|AAT53340.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|164712411|gb|EDR17945.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167511793|gb|EDR87173.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|167529186|gb|EDR91939.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|170127452|gb|EDS96327.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|170667969|gb|EDT18720.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|172080878|gb|EDT65958.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190562148|gb|EDV16116.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227006722|gb|ACP16465.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228833491|gb|EEM79053.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266322|gb|ACQ47959.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|301052733|ref|YP_003790944.1| metal-dependent hydrolase [Bacillus anthracis CI] gi|300374902|gb|ADK03806.1| conserved hypothetical metal-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPANLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|238855214|ref|ZP_04645533.1| ribonuclease Z [Lactobacillus jensenii 269-3] gi|260664577|ref|ZP_05865429.1| ribonuclease Z [Lactobacillus jensenii SJ-7A-US] gi|282932492|ref|ZP_06337917.1| ribonuclease Z [Lactobacillus jensenii 208-1] gi|313471958|ref|ZP_07812450.1| ribonuclease Z [Lactobacillus jensenii 1153] gi|238832106|gb|EEQ24424.1| ribonuclease Z [Lactobacillus jensenii 269-3] gi|239529111|gb|EEQ68112.1| ribonuclease Z [Lactobacillus jensenii 1153] gi|260561642|gb|EEX27614.1| ribonuclease Z [Lactobacillus jensenii SJ-7A-US] gi|281303441|gb|EFA95618.1| ribonuclease Z [Lactobacillus jensenii 208-1] Length = 309 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 86/294 (29%), Gaps = 79/294 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKQRNVSSLALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q+LR + I + +H H DHI G+ GL R + + P+ +Y Sbjct: 43 QHQILRTNIRPRKITKIFISHNHGDHIFGLPGLLSTRSFQGEVG-PLTIYGPAGLEQFVT 101 Query: 116 KHLF---ESFRY------------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI- 159 L Y F+ + Y ++ V + G ++ Sbjct: 102 TALRISKTKVSYPIHFVELKDDQKIFENSEFSVYCKKLDHRVASFGFRVVEKSHPGVLLM 161 Query: 160 -EAIPILQQHGRI---------------------SSLG----FRFGNVAYCTDVNAFPAE 193 + P +G I LG R + Y T Sbjct: 162 DKLAPYHLPNGPILGQLKAGKVVELEDGRVLNGKDFLGPEKKGRIVTIIYDT---RITPS 218 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 E Q+ D L+ ++ G H + +++ + + N K LTH+ Sbjct: 219 IAELAQDADVLVHESTFAGPEGKMAKAYYHSTATQAAEIAKKANVKRLFLTHVS 272 >gi|260655013|ref|ZP_05860501.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] gi|260630328|gb|EEX48522.1| metallo-beta-lactamase family protein [Jonquetella anthropi E3_33 E1] Length = 286 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 95/288 (32%), Gaps = 58/288 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG + V +T RR + I S +D GP Sbjct: 28 EITFLGTAGTRFV-MVT------------QRRASGGMWIRLPEGDFS-----IDPGPGAL 69 Query: 66 MQVLREQV---LSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKHLFES 121 +Q R + ++ VL TH H DH ++ L ++P + A P + + Sbjct: 70 VQACRLGLMKDRRLEGVLLTHRHLDHSSDLNALTEAMVTGNRKPCGLVALP--VDAVTGP 127 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 F L + + + + + I G I +L +H + G RF Sbjct: 128 EPILFSYLRSK----LARIHLWADGPLEI------GSITVSTVLLRHHGVECRGLRFSSP 177 Query: 180 ---NVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHS-SHFSLSESLKKIELINPKN 234 + +D FP + E + LI D L + H S+ + + + L + Sbjct: 178 YFADWGILSDTCYFPELA-EFYRGCHTLIADVTLMEKVRWIQHLSVPDLPELMALSHVSR 236 Query: 235 AILTHMHVDLDYDMVLKSTPSR-----------VVPAFDGMQFSSPIP 271 ++THM + L + P V A DGM P P Sbjct: 237 LVMTHMGNGI-----LDAGPENLAQALSTPQCLVCAACDGMTLRLPEP 279 >gi|291525360|emb|CBK90947.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium rectale DSM 17629] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 85/232 (36%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G + + D +L TH H DHI G+ + ++ Sbjct: 21 DDCHVLIDAGISGKK--IENGLNEFDMTATDMHGILVTHEHIDHIAGLG-----VMARRY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + + +DD + PI + G IE P+ Sbjct: 74 HMPIYATKATIGAIKCTKS--VGNIDDELFHPI-----------EAGVDFTIGDIEFEPL 120 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +RF N +A TD+ + + KLQNLD L+++A L+ G + Sbjct: 121 HISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTGAY 180 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKS 252 H S S + + + + IL H+ + +Y+ + Sbjct: 181 PYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYE 232 >gi|229120712|ref|ZP_04249955.1| Beta-lactamase domain protein [Bacillus cereus 95/8201] gi|228662717|gb|EEL18314.1| Beta-lactamase domain protein [Bacillus cereus 95/8201] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITVGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|160941590|ref|ZP_02088921.1| hypothetical protein CLOBOL_06490 [Clostridium bolteae ATCC BAA-613] gi|158435484|gb|EDP13251.1| hypothetical protein CLOBOL_06490 [Clostridium bolteae ATCC BAA-613] Length = 281 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 86/276 (31%), Gaps = 58/276 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKR 104 R S + +++D G L+E+ ID + +TH HADHI G+ GL ++ Sbjct: 4 RCSGSNLLIDCGEGT-QVALKEKGWSPKPIDIICFTHYHADHISGLPGLLLTMGNAERVE 62 Query: 105 PIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ + + L F F L + + P VI+ V + G Sbjct: 63 PLTLIGPKGLERVVGALRTIAPELPFELRFVELTENRERIQMGPYVIDAYRVNHNVLCYG 122 Query: 157 GVIEAIPI--------------------------LQQHGRISSLGFRFG------NVAYC 184 I ++ GR+ + G V YC Sbjct: 123 YSITIPRTGRFDVERARSKEIPQKFWSRLQKGEEIEHEGRLLTPDMVLGPDRRGLKVTYC 182 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALK-------NGLHSSHFSLSESLKKIELINPKNAIL 237 TD P E D I + + H + E+ + NPK L Sbjct: 183 TDTRPVP-VIAEYAAGADLFICEGMYGEKEKAAKAREYKHMTFYEAAALAKQANPKQMWL 241 Query: 238 THMHVDL----DYDMVLKSTPSRVVPAFDGMQFSSP 269 TH L +Y +++ R A DG Sbjct: 242 THYSPSLTKPEEYMEEVRTIFPRAKAARDGWTAELE 277 >gi|186476183|ref|YP_001857653.1| beta-lactamase domain-containing protein [Burkholderia phymatum STM815] gi|184192642|gb|ACC70607.1| beta-lactamase domain protein [Burkholderia phymatum STM815] Length = 257 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 52/229 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G ++ L V +DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSGKEVARRLERLGAGVDELDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + D+ V+ V+ ++V A Sbjct: 69 ALTLARKLSIPLYMSWGTARAV---------GADESN----VDLRVLWGDEV-----VAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F + + TDV L D L+++ Sbjct: 111 GDLSVLPYTVPHDAREPLQYVFSDGASRLGVLTDVGTSTPHIAAVLSGCDALVLECNHDV 170 Query: 209 -----LKNGL--------HSSHFSLSES---LKKIELINPKNAILTHMH 241 + + H + + L ++ ++ + H+ Sbjct: 171 QMLAASRYPPSLKARIGGNHGHLNNDAAADILASLDRSKLRHLVAAHLS 219 >gi|304382015|ref|ZP_07364568.1| metallo-beta-lactamase superfamily protein [Prevotella marshii DSM 16973] gi|304336813|gb|EFM03036.1| metallo-beta-lactamase superfamily protein [Prevotella marshii DSM 16973] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 81/234 (34%), Gaps = 46/234 (19%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q ++ I +L TH H DH+ + L + + Sbjct: 21 EKEGLLIDAGIGLRTLKKRFQDYGLRLSDIHYILITHDHTDHVKSVGTLSADY-----SL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY+ + + + L P +IE N G P Sbjct: 76 PVYSTEKVHEGIKNN-----HYLKKHVAPEY--THIIEKNR-----SFRLGEFTVTPFEI 123 Query: 167 QHGRISSLGFRF--GNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H ++G+R G+V +C TD+ + + + +L+I+A L++G + + Sbjct: 124 PHDSSDNVGYRVQHGDVVFCLMTDIGHIVDDIRKNISEAQYLVIEANHDVQMLRDGQYPA 183 Query: 217 -----------HFSLSESLKKIEL---INPKNAILTHMHVDLDYDMVLKSTPSR 256 H S SE + + K+ L H+ + ++ + + + Sbjct: 184 YLKQRVAGSYGHLSNSECAEALAKNATKKLKHVWLCHLSGENNHPELARKSVEH 237 >gi|229075848|ref|ZP_04208824.1| Ribonuclease Z [Bacillus cereus Rock4-18] gi|229098612|ref|ZP_04229552.1| Ribonuclease Z [Bacillus cereus Rock3-29] gi|229104747|ref|ZP_04235408.1| Ribonuclease Z [Bacillus cereus Rock3-28] gi|229117638|ref|ZP_04247009.1| Ribonuclease Z [Bacillus cereus Rock1-3] gi|228665817|gb|EEL21288.1| Ribonuclease Z [Bacillus cereus Rock1-3] gi|228678620|gb|EEL32836.1| Ribonuclease Z [Bacillus cereus Rock3-28] gi|228684691|gb|EEL38629.1| Ribonuclease Z [Bacillus cereus Rock3-29] gi|228707163|gb|EEL59360.1| Ribonuclease Z [Bacillus cereus Rock4-18] Length = 307 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 95/301 (31%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGY--------------------- 98 Q+L V I+ + TH H DHI G+ GL R + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTKLTVYGPKGIKQFIEV 102 Query: 99 -----FLKQKRPIDV---------------YAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 K P+++ Y + H E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFYVETKKLSHGIECFGYRIVEKDIQGVLLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI + G + + I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEVVELENGTILNGKDFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E QN D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQNADVLVHEATFAADDEQQAHDYFHSTSKQAASIALHANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|196037225|ref|ZP_03104536.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|229090142|ref|ZP_04221392.1| Beta-lactamase domain protein [Bacillus cereus Rock3-42] gi|196031467|gb|EDX70063.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|228693219|gb|EEL46930.1| Beta-lactamase domain protein [Bacillus cereus Rock3-42] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEATK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|256850990|ref|ZP_05556379.1| ribonuclease Z [Lactobacillus jensenii 27-2-CHN] gi|260661202|ref|ZP_05862116.1| ribonuclease Z [Lactobacillus jensenii 115-3-CHN] gi|282932057|ref|ZP_06337515.1| ribonuclease Z [Lactobacillus jensenii 208-1] gi|297205873|ref|ZP_06923268.1| ribonuclease Z [Lactobacillus jensenii JV-V16] gi|256616052|gb|EEU21240.1| ribonuclease Z [Lactobacillus jensenii 27-2-CHN] gi|260548139|gb|EEX24115.1| ribonuclease Z [Lactobacillus jensenii 115-3-CHN] gi|281303824|gb|EFA95968.1| ribonuclease Z [Lactobacillus jensenii 208-1] gi|297148999|gb|EFH29297.1| ribonuclease Z [Lactobacillus jensenii JV-V16] Length = 309 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 85/294 (28%), Gaps = 79/294 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKQRNVSSLALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q+LR + I + +H H DHI G+ GL R + P+ +Y Sbjct: 43 QHQILRTNIRPRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGLEQFVT 101 Query: 116 KHLF---ESFRY------------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI- 159 L Y F+ + Y ++ V + G ++ Sbjct: 102 TALRISKTKVSYPIHFVELKDDQKIFENAEFSVYCKKLDHRVASFGFRVVEKSHPGVLLM 161 Query: 160 -EAIPILQQHGRI---------------------SSLG----FRFGNVAYCTDVNAFPAE 193 + P +G I LG R + Y T Sbjct: 162 DKLAPYHLPNGPILGQLKAGKVVELEDGRVLNGKDFLGPEKKGRIVTIIYDT---RITPS 218 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 E Q+ D L+ ++ G H + +++ + + N K LTH+ Sbjct: 219 IAELAQDADVLVHESTFAGPEGKMAKAYYHSTATQAAEIAKKANVKRLFLTHVS 272 >gi|153806370|ref|ZP_01959038.1| hypothetical protein BACCAC_00631 [Bacteroides caccae ATCC 43185] gi|149131047|gb|EDM22253.1| hypothetical protein BACCAC_00631 [Bacteroides caccae ATCC 43185] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 51/229 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKTLKDFNILMDSIRAVFITHDHADHIKAVGHL-----GEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + PI ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKKEPITLE----DFHIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + ++LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAAHYISKANYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S S++ + + E + + L H+ D ++ + T Sbjct: 188 RITSKTGHMSNSDTAEFLAENITEHL--RYIWLCHLSKDNNHPELAYKT 234 >gi|114328593|ref|YP_745750.1| pyrroloquinoline quinone biosynthesis protein PqqB [Granulibacter bethesdensis CGDNIH1] gi|114316767|gb|ABI62827.1| coenzyme PQQ synthesis protein B [Granulibacter bethesdensis CGDNIH1] Length = 310 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 105/323 (32%), Gaps = 72/323 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + RT++S+ +S+ + + Sbjct: 1 MKIVVLGSAAGGGFPQWNSNAAGCRRARAGDPKAAPRTQASIAVSQDGVFW----FLFNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ VL I V+ T+ D + G+ L++++ VYA Sbjct: 57 SPDIRQQIEANAVLHPSGAIRSTPIAGVVLTNGDVDALAGL-----LTLRERQAFTVYAT 111 Query: 112 PDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L ++ F + + +R P P V+ + +G +E P+ + Sbjct: 112 SRVHGILNDNPIFEVLARDVVERRIIPASGPFVLTLPGG----EPSGLTVEFFPVPGKVP 167 Query: 170 -RISSLGFRFGNVAY-----------CTD----VNAFPAESL------EKLQNLDFLIID 207 + G A +D PA ++ ++L +D + D Sbjct: 168 LYLEQEGLLMNAPAPVEEGEQTVGAAISDGRSTACFIPACAMMTDSLRQRLAGVDTVFFD 227 Query: 208 A--------LKNGLHSS------HFSL---SESLKKIELINPKNAILTHMHVDL-----D 245 ++ GL H S+ ++ + + IL H++ D Sbjct: 228 GTLWSDDEMIRAGLVPKTGRRMGHMSVSGEDGTIASFRDLGVRQKILIHINNSNPVLLED 287 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 ++ + A DGMQ Sbjct: 288 SAERAEALAAGWTVAHDGMQIEL 310 >gi|253565569|ref|ZP_04843024.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_2_5] gi|265763901|ref|ZP_06092469.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_16] gi|251945848|gb|EES86255.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_2_5] gi|263256509|gb|EEZ27855.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_16] gi|301163352|emb|CBW22902.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis 638R] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 76/227 (33%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G ++ + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKSLKDINVTMDSIRAVFITHDHADHIKAVGHL-----GEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + +S+ K Y P+ +E+ H Sbjct: 81 TARVHAGINKSYCMTEKLHGSVRYLEKEEPMQLED-------------FRIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---- 216 ++G+ ++ TD+ + + +LII+A L+ G + + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAARYICKAHYLIIEANYDEEMLRMGPYPTYLKE 187 Query: 217 -------HF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H ++ + E I + L H+ D ++ + T Sbjct: 188 RISSKTGHMSNIDTANFLAENIMEHLRYIWLCHLSKDNNHPELAYKT 234 >gi|30264217|ref|NP_846594.1| ribonuclease Z [Bacillus anthracis str. Ames] gi|47529660|ref|YP_021009.1| ribonuclease Z [Bacillus anthracis str. 'Ames Ancestor'] gi|49187047|ref|YP_030299.1| ribonuclease Z [Bacillus anthracis str. Sterne] gi|65321533|ref|ZP_00394492.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Bacillus anthracis str. A2012] gi|165871127|ref|ZP_02215777.1| ribonuclease Z [Bacillus anthracis str. A0488] gi|167633571|ref|ZP_02391895.1| ribonuclease Z [Bacillus anthracis str. A0442] gi|167639504|ref|ZP_02397775.1| ribonuclease Z [Bacillus anthracis str. A0193] gi|170687270|ref|ZP_02878488.1| ribonuclease Z [Bacillus anthracis str. A0465] gi|170705861|ref|ZP_02896324.1| ribonuclease Z [Bacillus anthracis str. A0389] gi|177652639|ref|ZP_02935055.1| ribonuclease Z [Bacillus anthracis str. A0174] gi|190566047|ref|ZP_03018966.1| ribonuclease Z [Bacillus anthracis Tsiankovskii-I] gi|196034932|ref|ZP_03102339.1| ribonuclease Z [Bacillus cereus W] gi|218905280|ref|YP_002453114.1| ribonuclease Z [Bacillus cereus AH820] gi|227816920|ref|YP_002816929.1| ribonuclease Z [Bacillus anthracis str. CDC 684] gi|228929191|ref|ZP_04092218.1| Ribonuclease Z [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935464|ref|ZP_04098282.1| Ribonuclease Z [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947861|ref|ZP_04110148.1| Ribonuclease Z [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123664|ref|ZP_04252859.1| Ribonuclease Z [Bacillus cereus 95/8201] gi|229600192|ref|YP_002868439.1| ribonuclease Z [Bacillus anthracis str. A0248] gi|254683907|ref|ZP_05147767.1| ribonuclease Z [Bacillus anthracis str. CNEVA-9066] gi|254721742|ref|ZP_05183531.1| ribonuclease Z [Bacillus anthracis str. A1055] gi|254736255|ref|ZP_05193961.1| ribonuclease Z [Bacillus anthracis str. Western North America USA6153] gi|254744144|ref|ZP_05201827.1| ribonuclease Z [Bacillus anthracis str. Kruger B] gi|254754073|ref|ZP_05206108.1| ribonuclease Z [Bacillus anthracis str. Vollum] gi|254758234|ref|ZP_05210261.1| ribonuclease Z [Bacillus anthracis str. Australia 94] gi|41017543|sp|Q81M88|RNZ_BACAN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808605|sp|C3P7S4|RNZ_BACAA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808606|sp|C3LJR8|RNZ_BACAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808607|sp|B7JLZ5|RNZ_BACC0 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|30258862|gb|AAP28080.1| ribonuclease Z [Bacillus anthracis str. Ames] gi|47504808|gb|AAT33484.1| ribonuclease Z [Bacillus anthracis str. 'Ames Ancestor'] gi|49180974|gb|AAT56350.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164713046|gb|EDR18573.1| ribonuclease Z [Bacillus anthracis str. A0488] gi|167512563|gb|EDR87938.1| ribonuclease Z [Bacillus anthracis str. A0193] gi|167530977|gb|EDR93664.1| ribonuclease Z [Bacillus anthracis str. A0442] gi|170129401|gb|EDS98265.1| ribonuclease Z [Bacillus anthracis str. A0389] gi|170668887|gb|EDT19632.1| ribonuclease Z [Bacillus anthracis str. A0465] gi|172081974|gb|EDT67042.1| ribonuclease Z [Bacillus anthracis str. A0174] gi|190562966|gb|EDV16932.1| ribonuclease Z [Bacillus anthracis Tsiankovskii-I] gi|195992471|gb|EDX56432.1| ribonuclease Z [Bacillus cereus W] gi|218539378|gb|ACK91776.1| ribonuclease Z [Bacillus cereus AH820] gi|227005393|gb|ACP15136.1| ribonuclease Z [Bacillus anthracis str. CDC 684] gi|228659799|gb|EEL15444.1| Ribonuclease Z [Bacillus cereus 95/8201] gi|228811848|gb|EEM58182.1| Ribonuclease Z [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824216|gb|EEM70030.1| Ribonuclease Z [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830481|gb|EEM76091.1| Ribonuclease Z [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229264600|gb|ACQ46237.1| ribonuclease Z [Bacillus anthracis str. A0248] Length = 307 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 91/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIIEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + I P+ + G + + I Q+ I+ LG + YC Sbjct: 163 KLLEIGVKPGPLFKRLKDGEVVELENGTILNGNDFIGPPQKGRVITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|189465786|ref|ZP_03014571.1| hypothetical protein BACINT_02147 [Bacteroides intestinalis DSM 17393] gi|224539880|ref|ZP_03680419.1| hypothetical protein BACCELL_04791 [Bacteroides cellulosilyticus DSM 14838] gi|189434050|gb|EDV03035.1| hypothetical protein BACINT_02147 [Bacteroides intestinalis DSM 17393] gi|224518496|gb|EEF87601.1| hypothetical protein BACCELL_04791 [Bacteroides cellulosilyticus DSM 14838] Length = 267 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 53/230 (23%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHI---HGIDGLRGYFLKQKRPID 107 +++D G + L+E + +I AV TH HADHI G+ K I Sbjct: 26 ILIDAGIAVRTIKKSLKEVGVGMETIRAVFVTHDHADHIKAVGGLGE--------KLHIP 77 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY + + +S+ K Y P+V+E+ Sbjct: 78 VYTTARIHEGINKSYCMTEKLHSSVHYLEKEEPMVLED-------------FHIESFEVP 124 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H ++G+ ++ TD+ + + ++ ++LI++A L+ G + Sbjct: 125 HDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAKFIRKANYLILEANYDDEMLRMGTYPQY 184 Query: 216 ---------SHF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H +++ + E I K L H+ D ++ + T Sbjct: 185 LKERITSRTGHMSNIATAEFLAENITEDLKYIWLCHLSKDNNHPELAYKT 234 >gi|257885079|ref|ZP_05664732.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|261207368|ref|ZP_05922055.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289566782|ref|ZP_06447194.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|294616473|ref|ZP_06696256.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|294619313|ref|ZP_06698782.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|257820931|gb|EEV48065.1| conserved hypothetical protein [Enterococcus faecium 1,231,501] gi|260078428|gb|EEW66132.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|289161409|gb|EFD09297.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|291590670|gb|EFF22396.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|291594473|gb|EFF25881.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] Length = 246 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 74/213 (34%), Gaps = 23/213 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G +++ L +DAV+ +H H DHI + L+ Y+ + Sbjct: 25 QSDGFNLLIDAGSATLIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR--- 81 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ + ++ D + + V + + + G + H Sbjct: 82 --NPETLLSIYG------HTKDSIHFEELTMENVSKGHPYFEAEELKIGPFLITFMETIH 133 Query: 169 GRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFS 219 + R + D + + + ++ D + D N H +HF+ Sbjct: 134 -PVVCYAMRIVEETTGKVFVFTGD-SGYLESFADFAKDADLFLADTYLFEGNEHHHAHFT 191 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 E+ + + N K +LTH+ D + + Sbjct: 192 SKEAGELAKSANVKKLVLTHLPQFGDLEQLKNE 224 >gi|229108651|ref|ZP_04238262.1| Beta-lactamase domain protein [Bacillus cereus Rock1-15] gi|228674792|gb|EEL30025.1| Beta-lactamase domain protein [Bacillus cereus Rock1-15] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E ++ N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIVKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|255531764|ref|YP_003092136.1| beta-lactamase domain-containing protein [Pedobacter heparinus DSM 2366] gi|255344748|gb|ACU04074.1| beta-lactamase domain protein [Pedobacter heparinus DSM 2366] Length = 303 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 35/182 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + TILG ++ P R ++ ++ + ++D Sbjct: 1 MK--FEVTILGSSSAT--PVYN--------------RNPTAQLLNC-----NEKFYLIDC 37 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G Q++R ID V +H H DH G+ GL R PI ++A + Sbjct: 38 GEGTQQQLIRFGFKANKIDFVFISHLHGDHYFGLIGLLSSLHLNGRIKPIKIFAPAALAE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L F++ + YP V D P + ++ I+ H RI GF Sbjct: 98 ILELQFKH---SETVIRYP---VEFVATQTDAPAEI-FENADLKVETIILNH-RIPCTGF 149 Query: 177 RF 178 +F Sbjct: 150 KF 151 >gi|70606110|ref|YP_254980.1| hypothetical protein Saci_0271 [Sulfolobus acidocaldarius DSM 639] gi|68566758|gb|AAY79687.1| conserved protein [Sulfolobus acidocaldarius DSM 639] Length = 231 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 94/239 (39%), Gaps = 30/239 (12%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +R +SS+ + +GS ++++D G ++ +++ A+ TH H DHI+GI Sbjct: 17 KRVKSSIYV-----KGSEGSLLLDLGSGASFKLDDLELVDFSAIFVTHLHIDHINGIPDH 71 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Y ++ PD S ++ L +N +IE + K Sbjct: 72 LIYRR-------IFGLPDVE---IRSPPGLYEILSSYQKWNGINIKLIEESKP----KGK 117 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI--IDAL 209 G + + H I ++ + + + Y D + +E++++ D +I L Sbjct: 118 VGDLNIYSVEACHA-IYAVSYVITDNKRKIVYTGDTSQPCEPIMEEIKDADLVIHEASCL 176 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + H S+ + L P ++TH+ + + +K + A+DG+ + Sbjct: 177 EECSKYGHTSVKQLLSMFSS--PSKLVMTHIPSQI--EDQVKLIAKNYIVAYDGLVLNV 231 >gi|65318470|ref|ZP_00391429.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Bacillus anthracis str. A2012] Length = 242 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 23 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 82 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 83 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 126 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 127 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 184 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 185 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 242 >gi|296134059|ref|YP_003641306.1| metal-dependent hydrolase [Thermincola sp. JR] gi|296032637|gb|ADG83405.1| metal-dependent hydrolase [Thermincola potens JR] Length = 256 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 25/215 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK------Q 102 + NT V++D G + + R +DAV+ +H H DH + LR + + Sbjct: 25 QSENTNVLLDCGNGVFANLQRYINFRHLDAVIISHFHPDHYLDLFCLRHAVMGATRDGSR 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y P + +++ Y + IE + + I Sbjct: 85 RGLLPLY-IPGTPEKIYQQL---------NQYADVFQIFKIEPGNSIVLKDLVFRFIRTE 134 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-----H 217 L+ +G ++ G Y D FP ++ + + L+ +A H Sbjct: 135 HALETYGLTAAEGNL--KFGYTADTRYFPGL-VDFFRGCNLLVAEASVLEQDKKYAEIGH 191 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 ++ ++ + +LTH + D + Sbjct: 192 LTVRQAAQLANETGTSRLVLTHFWPEYDPARIRAE 226 >gi|163939001|ref|YP_001643885.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163861198|gb|ABY42257.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSVTKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y + D+ + + + + G Sbjct: 85 LPELPIYG----------------HSFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRIIAGDDVVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|218902284|ref|YP_002450118.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|218537743|gb|ACK90141.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNSEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITVGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|239623431|ref|ZP_04666462.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522397|gb|EEQ62263.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 303 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 90/283 (31%), Gaps = 58/283 (20%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++D G L+E+ ID + +TH HADHI G+ GL Sbjct: 19 WLTSMMARCRGSNLLIDCGEGT-QVALKEKGWSPKPIDVICFTHYHADHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ P+ + + L F F L + + P VI+ V Sbjct: 78 GNAERVEPLTLVGPKGLERVVSALRTIAPELPFELKFVELTENREHMELGPYVIDAYRVN 137 Query: 150 ICMKSAGGVI---------------EAIPI-----------LQQHGRISSLGFRFG---- 179 + G I EAIP ++ GR+ + G G Sbjct: 138 HNVICYGYSISIPRTGRFDVERAKAEAIPQKFWSRLQKGEEMEHEGRLLTPGMVLGPDRR 197 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELI 230 V YCTD P E D I + + H + E+ Sbjct: 198 GLKVTYCTDTRPVP-VIAEYAAGADLFICEGMYGEKDKAAKAKEYKHMTFYEAAYLAREA 256 Query: 231 NPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSSP 269 P LTH L +Y ++S R A DG Sbjct: 257 QPAQMWLTHYSPSLTRPEEYMDEVRSIFPRAKAARDGWTMELE 299 >gi|154337577|ref|XP_001565021.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062060|emb|CAM45154.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 470 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 13/95 (13%) Query: 55 TVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF---------LK 101 +++D G F ++R + ++D +L TH HAD + G+D LR Sbjct: 143 HILIDCGKTFRDAYFKVMIRCNIRAVDTLLLTHGHADAVAGLDDLRDLQSMHMVSTGDWV 202 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 + Y + +K L +S Y + + Sbjct: 203 VDSFVPTYLSRSTLKTLEKSVDYIIRNSIKSGHAA 237 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 44/156 (28%) Query: 158 VIEAIPILQQHGR-ISSLGFRFGN---------------------VAYCTDVNAFPAESL 195 + +HG+ S+ + FG V Y +DV+ PA S+ Sbjct: 314 DLPFYSFPVEHGKGYISMAWVFGRGTAFKSQQTQQQGQHQPEGSCVVYISDVSNVPATSM 373 Query: 196 EKLQNL---DFLIIDALKN--GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY---- 246 LQ+L D L +D L + H+ + + ++ P+ MH L++ Sbjct: 374 AFLQDLVKIDVLFVDCLSPTGRVSPVHYCEDGMMALVLVLKPRYVFGVGMHCALEHFKWM 433 Query: 247 DMVLKSTPSR-------------VVPAFDGMQFSSP 269 + K+ S V ++DGMQ P Sbjct: 434 AELQKALDSHVAAGRLRAGEVQGVELSYDGMQVLLP 469 Score = 42.0 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 8/55 (14%) Query: 3 DYYHFTILGCGASLGVPRIT-------GDWGACDPTNPKNRRTRSSLKISRVSER 50 Y T++G G S GVP I + DP+ P N R SL I+ Sbjct: 23 GYMSLTVVGSGVSTGVPVIGHLGLGCACEDAVADPSGP-NSRNNISLLITLPRGD 76 >gi|126657307|ref|ZP_01728466.1| Beta-lactamase-like protein [Cyanothece sp. CCY0110] gi|126621294|gb|EAZ92006.1| Beta-lactamase-like protein [Cyanothece sp. CCY0110] Length = 292 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 75/229 (32%), Gaps = 34/229 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V R +I D G + + L ++ + +TH H DHI G F+ Sbjct: 34 SCVEMRVGKERLIFDGGTGLRILGESLLSEMPVTGHLFFTHSHWDHIQGFPFFAPAFIP- 92 Query: 103 KRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + + D +P P+ I + A +I Sbjct: 93 GNKFHIYGLPAPNGATIKQRLH------DQMLHPNFPVPLQIMQAHLEFYDIEAREIINI 146 Query: 162 IPILQQHGRI----SSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDAL 209 + + G++ +LG+R Y TD FP L ++ + LIID Sbjct: 147 NDVTVETGKLNHPGEALGYRVTYKNLTAVYITDTEHFPDSLDNNVLHLARDAEVLIIDTT 206 Query: 210 ---KNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + H + E++K + K +L H D ++ Sbjct: 207 YTDQEYYDPKLSKVGWGHSTWQEAVKIAKSAKVKKLVL--FHHDPSHND 253 >gi|288553566|ref|YP_003425501.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Bacillus pseudofirmus OF4] gi|288544726|gb|ADC48609.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Bacillus pseudofirmus OF4] Length = 244 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 31/235 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL------KQ 102 +T +++D G V + + ++ V+ +H H DH I L+ + K+ Sbjct: 25 EHGSTKLLLDCGSGVVSNVQKYIDLNDLNGVVLSHYHHDHFADIGPLQYAQIVNKGMGKR 84 Query: 103 KRPIDVYAAP-DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 K+ +YA D +++ K++ P+ P Sbjct: 85 KKDFTIYAHQEDTASFNKLAYKDLVKSVAYNERAPL--------KIGPFTFYFF-KTQHP 135 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-GLH---SSH 217 +P +I+ G + Y D + F + + D +I + G H H Sbjct: 136 VPCYAM--KITCEG---KQIVYTADSSYFAGLA-DFANGCDLVITECSGYSGDHVGQYGH 189 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + ++ K + IL+H+ D++ + + R V+ A G+ Sbjct: 190 MNSEDAAKLAVNSGIEKIILSHLPHHGDHEQLKREVEERFNRIVLLAKSGLVLEL 244 >gi|256810849|ref|YP_003128218.1| ribonuclease Z [Methanocaldococcus fervens AG86] gi|256794049|gb|ACV24718.1| ribonuclease Z [Methanocaldococcus fervens AG86] Length = 314 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 98/317 (30%), Gaps = 93/317 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA+ VP KNR I + G + D G + Sbjct: 1 MKLIFLGTGAA--VP-------------SKNRN-----HIGIAFKFGGEV-FLFDCGENI 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L +V I+ + TH H DHI GI GL F + + I+++ + + Sbjct: 40 QRQMLFTEVSPMKINKIFITHLHGDHILGIPGLLQSMGFFGRNKEIEIFGPEGTKELIKS 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------- 169 S F ++ PI + E + I + E I +H Sbjct: 100 SLNLGFHCIEF----PIKVYEICEKEPITIYKEE---NYEIIAYPTKHSVPSYAYIFKEI 152 Query: 170 --------RISSLGFRFGN---------------------------------VAYCTDVN 188 + LG R G +AY D Sbjct: 153 KKPRLDIEKAKKLGVRIGPDLKKLKNGEAVKNIHGEIVRPEDVLLPPKKGFCLAYSGDTL 212 Query: 189 AFPA--ESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHM 240 + LE+L D LI +A + L H ++ +++ +L + K ILTH+ Sbjct: 213 PLEDFGKYLEEL-GCDVLIHEATFDDLAKDIAKENMHSTIGDAVSIAKLADVKALILTHI 271 Query: 241 HVDLDYDMVLKSTPSRV 257 D + V Sbjct: 272 SARYDKEEYFNLYKMNV 288 >gi|237744563|ref|ZP_04575044.1| metal dependent hydrolase [Fusobacterium sp. 7_1] gi|229431792|gb|EEO42004.1| metal dependent hydrolase [Fusobacterium sp. 7_1] Length = 260 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VDTG ++ + +++ I A+L TH H+DHI+G + +K I Sbjct: 20 EDYKLLVDTGFSCKKTEEKLEKIGKKLSDISAILITHEHSDHING-----AGVIARKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y P+ + ++ ++ D + ++ P Sbjct: 75 PIYITPESYRA-------------GAIKLGQIDKSLLNFIDGDFILND---KVKVSPFDV 118 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII------DAL------ 209 H ++GF+ +A TD+ E +++D ++I + L Sbjct: 119 MHDAERTIGFKLETQLNKKIAISTDIGYITNIVREYFKDVDAMVIESNYDFNTLMNCQYP 178 Query: 210 -----KNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S +E K I+ + K L H+ D Sbjct: 179 WNLKERVKSRNGHLSNNECAKFIKEMYTNKLKKVFLAHVSKD 220 >gi|91203639|emb|CAJ71292.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 264 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 40/254 (15%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGID 93 R+S I V+VD GP ++ L + +DA++ +H H DH ++ Sbjct: 26 LRASGGIWYSLH---GFNVLVDPGPGCLVRCLSSRPKMDPMQLDAIILSHRHLDHAADVN 82 Query: 94 GLRGYFLKQK--RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + + + +YA D + F Y R Y I I+I+ Sbjct: 83 VMIEAMTEGGFKKRGTLYAPEDALTEDPVVFHYV------RNY--ITKIIIIKEGG---R 131 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAY----CTDVNAFPAESLEKLQNLDFLIID 207 + + GV P+ QH + G F Y D FP L K N D LII+ Sbjct: 132 YQLSDGVYFETPLKHQHPS-ETYGINFITPEYTISHIVDTRYFPD--LLKCYNGDTLIIN 188 Query: 208 ALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDL----DY---DMVLKSTP 254 ++ H ++ + + + + PK +L H + + + + + T Sbjct: 189 VVRYNADRDTRKWLYHLTIRDVREIVTTLKPKTTLLNHFGMTMLKAHPHKVAEQLSAETG 248 Query: 255 SRVVPAFDGMQFSS 268 ++ A DGM+F+ Sbjct: 249 LNIIAASDGMRFNL 262 >gi|254166986|ref|ZP_04873839.1| ribonuclease Z [Aciduliprofundum boonei T469] gi|197623842|gb|EDY36404.1| ribonuclease Z [Aciduliprofundum boonei T469] Length = 308 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 72/291 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P+ +N + + + + ++ D Sbjct: 1 MASTIRIVFFGTGGSW-------------PSPERN--------VMSIGVQIDSEVLLFDC 39 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-RGYFLK-QKRPIDVYAAPDCMK 116 G Q++ + I + TH H DH G+ GL + L +K P+++Y + Sbjct: 40 GEGTQRQMMHTNMSFMKIKRIFITHYHGDHFLGLAGLIQTMTLNERKEPLEIYGPDRTID 99 Query: 117 HLFE---------SF----------------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L + SF Y K + + P + + E + I Sbjct: 100 ILTKFLTIGYYSPSFKIVLYELKGNESLDFGDYVVKVMKTKHPVPSLAYAIKEKDMPRID 159 Query: 152 MKSA---GGVIEAIPILQQHGRIS-----------SLGFRFGN-VAYCTDVNAFPAESLE 196 A G + + L+++G+I S G R G + Y D E + Sbjct: 160 RNRAKALGLNSKILEKLRKNGKIEYEGKEITIDEVSNGVRVGRKIVYSGDTAPM-EEMIS 218 Query: 197 KLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 N + LI +A H S ++ K + N +L H+ Sbjct: 219 FAANANVLIHEATVESSLEEQANQYGHSSARQAAKIAKKANVDALLLVHIS 269 >gi|325273054|ref|ZP_08139364.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas sp. TJI-51] gi|324101827|gb|EGB99363.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas sp. TJI-51] Length = 303 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 89/318 (27%), Gaps = 69/318 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + +LG A G P+ + C D T RT+SS+ +S V+ + Sbjct: 1 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLRATARTQSSIALSDDGVHW----VLCNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I+A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L + + IE + P+ Sbjct: 112 DMVHQDLTTGFP-LFNML--SHWNGGLQWNRIELEGSFVIDACPNLRFTPFPLRSAAPPY 168 Query: 172 SSLGF----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 S F G + Y + + L + D L++D Sbjct: 169 SPHRFDPHPGDNLGLLVEDTRTGGKLFYAPGLGQVDDKLLAMMHGADCLLVDGTLWEDDE 228 Query: 208 ------ALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVD---LDYD--MVL 250 + G H + E L + +L H++ LD Sbjct: 229 MQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPR---QRKVLIHINNTNPILDEASPERA 285 Query: 251 KSTPSRVVPAFDGMQFSS 268 + V AFDGM Sbjct: 286 EVLRRGVEVAFDGMSIEL 303 >gi|228954426|ref|ZP_04116452.1| Ribonuclease Z [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805358|gb|EEM51951.1| Ribonuclease Z [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 307 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 94/301 (31%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVERDIQGALLVD 162 Query: 139 NPIVIENNDVPIC--------MKSAGGVI----EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + PI ++ G I E I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPIFKRLKDGEAVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|219847288|ref|YP_002461721.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219541547|gb|ACL23285.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 255 Score = 70.9 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 42/246 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G G+P DP + + G +++D G + Y Sbjct: 5 RIVLLGTGT--GLP---------DPDRSY----------THLVWDGPGGPLLIDVGGESY 43 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAAPDCMKHLFE 120 ++L + + V TH H DHI+G+ L + L+ P+ +Y ++ Sbjct: 44 RRLLAAGIDPQQLRGVFLTHSHCDHINGLSALI-FSLRLGGRNEPLPIYGLTSTLELAS- 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--- 177 Y A + + + + + + + H R L R Sbjct: 102 --GYVMAAGLEE-WAALADWRPVTAGEQVSLGEGLVLATAGT----AHSR-PCLAVRLSA 153 Query: 178 --FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNA 235 V Y +D PA + E +D LI +A + H + ++ Sbjct: 154 PNVSPVCYSSDTEPCPAVT-ELATGVDLLIHEATVAEPFAGHTTPRQAGAVAAAAGVHRL 212 Query: 236 ILTHMH 241 +L H Sbjct: 213 VLVHFS 218 >gi|294507228|ref|YP_003571286.1| metallo-beta-lactamase superfamily, [Salinibacter ruber M8] gi|294343556|emb|CBH24334.1| metallo-beta-lactamase superfamily, putative [Salinibacter ruber M8] Length = 281 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 37/213 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF--YM 66 +LG GA+L P R++ ++ + T++VD G D + Sbjct: 33 LLGTGAALSDPH------------------RTTTMLAVSDDASPANTLVVDCGGDVLQRL 74 Query: 67 QVLREQVLSIDAVLYTHPHADHIHG--IDGLRGYFLKQKRPIDVYAAPDC---MKHLFES 121 Q + +D ++ TH H DH G + + + + RPI V + L+++ Sbjct: 75 QACGRSIDEVDGLIVTHAHMDHASGFPLFMEKIWLDGRDRPIPVCGIEPAQAQAQRLWDA 134 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D PPI V + P+ ++ HG +++G RF Sbjct: 135 FAPVHEGWDGI--PPIDWRTVPHEHGAPVWTQAP---WAVTAAPVDHGDTANVGLRFEHA 189 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G +AY D + ++ Q D L+ +A Sbjct: 190 DGDGVLAYSCDTAP-TSSVVDLAQGADVLVHEA 221 >gi|158298629|ref|XP_318827.4| AGAP009743-PA [Anopheles gambiae str. PEST] gi|157013976|gb|EAA14182.4| AGAP009743-PA [Anopheles gambiae str. PEST] Length = 797 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 103/305 (33%), Gaps = 69/305 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S +P N+ S + S++ +++++D G Sbjct: 466 RLIFLGTGSS--IP---------------NKTRNVSAILILTSKQ---SSILLDCGEGTV 505 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGI------------DGLRGYFLKQKRP 105 Q+ R E + SI V +H HADH G+ D L Sbjct: 506 GQIWRVFGKEQAEEILRSIKTVYISHLHADHHLGLIGLLQARKKLLGDNCECLTLVAPEQ 565 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV-------IENNDVPICMKSAGGV 158 I + + Y D P+ + + I V C S G Sbjct: 566 ISYWLRLYDCRFETIHKDYVLVKNADLLENPLQDEKLLAVGIKEIATCRVRHCPHSFGVA 625 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS- 216 ++ + H + G + Y D P ESL +L ++ LI +A ++ Sbjct: 626 LKVASL-GTHPETNIEGDV--KITYSGDT--MPCESLIELGRDSTVLIHEATMEDELAAE 680 Query: 217 -----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV--------PAFDG 263 H +LS+++++ +N + +LTH Y + + P + AFD Sbjct: 681 ARIKMHSTLSQAIEQGRKMNARYTLLTHFSQR--YAKIPRLRPDQQQTGLGTDLGIAFDN 738 Query: 264 MQFSS 268 M+ + Sbjct: 739 MEVTL 743 >gi|307688961|ref|ZP_07631407.1| ribonuclease Z [Clostridium cellulovorans 743B] Length = 315 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 90/303 (29%), Gaps = 91/303 (30%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY- 65 +LG G G+P R SS +S +++D G Sbjct: 4 ICLLGSG--GGMPMPF--------------RNLSSTLLSYKG-----RKILIDCGEGTQV 42 Query: 66 -MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP---DCMKHLF 119 M+++ ++D + TH H DHI G+ GL R + + ++ + Sbjct: 43 SMKMIGWGFKTLDLICITHCHGDHIVGLPGLLATLGNSGRTTKVTIIGPQGITKVIEGIS 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 F Y L+ P ++ I+NN I + G I+ + +H +G+ F Sbjct: 103 VLFPYLPYELEVIENPALIE-FTIDNNG--IKVTEGNGEIKLTTLELEHSA-PCIGYSFY 158 Query: 179 ----------------------------GNVAY----------------------CTDVN 188 NV Y TD Sbjct: 159 IKRNRKFIAQVAEENNVPKVLWGKLQKGENVFYEGKEYHSNMVLGAERRGIKISLTTDTR 218 Query: 189 AFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P E +++ D I + + + + H + E+ + +LTH Sbjct: 219 PLP-SIKEFIRDSDLFICEGTYGDSLDIDKAIANKHMTFKEAAELAHCSKVYELLLTHFS 277 Query: 242 VDL 244 + Sbjct: 278 PAM 280 >gi|315283013|ref|ZP_07871295.1| ribonuclease Z [Listeria marthii FSL S4-120] gi|313613350|gb|EFR87212.1| ribonuclease Z [Listeria marthii FSL S4-120] Length = 306 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGESDLTIYGPAGIAEYIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S I N++ + + +HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKIIFNEIEPGLIFEDKMFSVTADELEHG-VRSFGYRI 149 >gi|227542821|ref|ZP_03972870.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181447|gb|EEI62419.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] Length = 255 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 90/286 (31%), Gaps = 53/286 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S+G P SS + + G +++D G Sbjct: 1 MKLTILGCTGSVG-----------SAVGP------SS---GYLLQDGERPAIVMDIGSGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 ++ R + VL++H H+DH L ++ P ++ P+ + Sbjct: 41 MAELERRINPADAHVLFSHLHSDHCADFPSL--LVWRRFHPTHKAEGRHLLFGPPETPER 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + +DD I + V G +E P H I + R Sbjct: 99 MGRLISDDPEGIDD-----ITDTFAFGPWHVGTKEIVEGFTVE--PFHAIH-PIDAYALR 150 Query: 178 FGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKK 226 + +AY D +A + +E + D I +A H S E+ Sbjct: 151 LTHRHSGTVLAYSGDSSA-TDDLVECAHDADLFICEATWGASSAGQPADMHMSGGEAGDI 209 Query: 227 IELINPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGMQFSS 268 K ++TH+ D + P V+ A G+ Sbjct: 210 ARRAGAKKLLITHIPPWGDREGAVSAAKAEFPGEVLVARPGLSLEL 255 >gi|225374422|ref|ZP_03751643.1| hypothetical protein ROSEINA2194_00037 [Roseburia inulinivorans DSM 16841] gi|225213660|gb|EEG96014.1| hypothetical protein ROSEINA2194_00037 [Roseburia inulinivorans DSM 16841] Length = 242 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 53/229 (23%) Query: 57 IVDTG-PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++D G + + SID +L TH H DHI G+ + ++ I + Sbjct: 2 LIDAGISGKR---IENGLNSIDLKTADMQGILITHEHIDHIAGLG-----VIARRYGIPM 53 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA + + + + ++ + + + + G + P+ H Sbjct: 54 YATGETVDAILHT-----------KTVGKIDEALFQVIES--EREFTIGDLTIEPVSISH 100 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS--- 215 + ++ NVA TD+ + +EKLQN+D L+++A L+ G + Sbjct: 101 DAADPVAYKIRQQEKNVAVMTDLGTYDDHIVEKLQNVDVLLLEANHDVRMLQAGAYPYPL 160 Query: 216 --------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + + + K+ +L H+ + +Y + T Sbjct: 161 KQRILGDKGHLSNERSGQLLGKVLHDHLKHIVLGHLSKENNYPELAYET 209 >gi|292493482|ref|YP_003528921.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus halophilus Nc4] gi|291582077|gb|ADE16534.1| coenzyme PQQ biosynthesis protein B [Nitrosococcus halophilus Nc4] Length = 306 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 96/322 (29%), Gaps = 82/322 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G P+ + C R++SS+ S V+ +T PD Sbjct: 5 VLGSGAGGGFPQWNCNCHNCSRLRKGEFKGQARSQSSVAASTNGTDW----VLFNTSPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I +++ DH G+ LR + +P++VY Sbjct: 61 LKQLQNFPAIQPGRGLRDTGIRSIVLIDSQIDHTTGLLMLR----EHHQPLEVYCTEPVY 116 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQHG 169 + L FK LD + + + G + +P+ H Sbjct: 117 QDLTTGNP-LFKVLDHYCTVNWHPIRLPREDAPGEAFQVEGLRLVPVPLRSEAPPYSPHR 175 Query: 170 RISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 +G G + Y + L + D L++D F Sbjct: 176 HNYHVGDTIGVLMEDLTTQKRLFYAPGLGQIENHVLSLMAEADCLLVDGT--------FW 227 Query: 220 LSESLK--------------------------KIELINPKNAILTHMHVDLDYDMVLKST 253 + ++ L NP+ IL H++ ++ + + Sbjct: 228 AEDEMEQAGISQKRAAEMGHLPQSGPGGMMSTMAPLTNPRK-ILIHINNTNP--ILDEES 284 Query: 254 PS-------RVVPAFDGMQFSS 268 P + AFDGM + Sbjct: 285 PERAQLEAAGIEVAFDGMNITL 306 >gi|282877884|ref|ZP_06286693.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] gi|281299885|gb|EFA92245.1| metallo-beta-lactamase domain protein [Prevotella buccalis ATCC 35310] Length = 283 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 86/290 (29%), Gaps = 87/290 (30%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + F LG G+S N +++D G Sbjct: 15 SNMLKFICLGSGSSG-----NCYC-----------------------LFTENDGLMIDAG 46 Query: 62 PDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +L+ I +L TH HADH+ + + + + VYA Sbjct: 47 IGIR--LLKRSFKEYGLSLSQIHHILVTHDHADHVKSVGAISLDYH-----LAVYATHLV 99 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + YC Y +++ G P H ++ Sbjct: 100 HAGIERN--YCVHKKVAPAYMEVID----------KGQPFQLGDFTVTPFGVPHDSSDNV 147 Query: 175 GFRF--GNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSL---- 220 G++ GN+ + TD+ E + ++L+I+A L G + H + Sbjct: 148 GYKIECGNIVFTLMTDIGHVTDEMRAVISETNYLVIEANHDPKMLMYGPYPQHLKIRISG 207 Query: 221 ----------SESLK--KIELINPKNAILTHMH-----VDLDYDMVLKST 253 +++L E + ++ L H+ DL ++ V Sbjct: 208 PNGHLANQDCAQALAENMTERM--RHVWLCHLSEENNCPDLAHETVAHIL 255 >gi|257440848|ref|ZP_05616603.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] gi|257196720|gb|EEU95004.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] Length = 262 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 68/225 (30%), Gaps = 54/225 (24%) Query: 50 RGSNTTVIVDTGPDFYMQ--VLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +I+D G L+E + +L TH H+DH+ G+ +K Sbjct: 19 RTGEKYIIIDMGKGVRTTSAALKELGLNISDCAGILVTHEHSDHVKGL-----ATFLKKN 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ VY A D + L + P + + + G Sbjct: 74 PLPVYGADDTLDFL----------DANGIVPASCALRTLSGGEEDV------GDFGVTMF 117 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------- 208 H + +G+R + TD+ + L D + +++ Sbjct: 118 PTSH-DVPCVGYRIHTPDNKTMTIATDLGVLTPPVHQALSGCDLVALESNYDLHMLRSGR 176 Query: 209 ------LKNGLHSSHFSLSES----LKKIELINPKNAILTHMHVD 243 + + H S E L+ I+ K L H+ + Sbjct: 177 YPYYLRSRIESNRGHLSNDECSAKLLELIQE-GCKKFALCHLSQE 220 >gi|297621652|ref|YP_003709789.1| Metallo-beta-lactamase superfamily protein [Waddlia chondrophila WSU 86-1044] gi|297376953|gb|ADI38783.1| Metallo-beta-lactamase superfamily protein [Waddlia chondrophila WSU 86-1044] Length = 258 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 65/177 (36%), Gaps = 32/177 (18%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G ++ + + IDA+L TH H+DHI G+ + + K I Sbjct: 21 PHCKLLIDAGMSGLAIKRRLEEINVDIDEIDAILVTHEHSDHIQGL-RVLAF----KHRI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A + K + F C K + + G I P Sbjct: 76 PVFANHETAKGIVNRFHDCPK---------------FKIFSTGESFEYCGLEIH--PFSI 118 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 QH + + F + +CTD+ + + L D+L ++A + H S Sbjct: 119 QHDTLDPVAFTIKIDNLKIGFCTDLGFVTSLVRKNLLQCDYLYLEA-NHEPSMVHSS 174 >gi|91203011|emb|CAJ72650.1| hypothetical protein kustd1905 [Candidatus Kuenenia stuttgartiensis] Length = 255 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 82/249 (32%), Gaps = 46/249 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+G G G P K R +L + + ++ DTGP Sbjct: 1 MELTIIGSGT--GAP-------------SKTRAYPCTLI------KVKDKHLVFDTGPGS 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPI---DVYAAPDCMKH 117 Q+L V +D + Y+H H DH L + K P+ +Y C Sbjct: 40 LRQLLLAGVTYADVDYIYYSHFHPDHSL---DLVSFLFAMKYDSPVRTKPLYITGPC--G 94 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + + + P + + E + G I A P+ S+G+R Sbjct: 95 LHKFHQGLVSVYGNTITPKTFDLHLEEIERGVLTYD--GWKITAEPVRH---SSQSIGYR 149 Query: 178 FGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIELI 230 + +AY D + + +N D +++ + H + + + Sbjct: 150 IESSAGRTIAYSGDT-DYCEGIILLAKNTDLFVLECSFPDDKKTEGHLTPHLCAQIAQKA 208 Query: 231 NPKNAILTH 239 K ILTH Sbjct: 209 QCKKLILTH 217 >gi|331270691|ref|YP_004397183.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum BKT015925] gi|329127241|gb|AEB77186.1| Metallo-beta-lactamase superfamily protein [Clostridium botulinum BKT015925] Length = 240 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 44/241 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----- 103 + + ++VD G +V + ID+V+ +H H DH + + Sbjct: 22 QSGDHNILVDCGSGILSKVQEYIPLNKIDSVILSHYHGDHAA---DVIPLQYEVGISKKL 78 Query: 104 ----RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + I +Y +L F ++ T + N I++N ++ G + Sbjct: 79 GKRNKQIQIYG-----HNLSSQF-------NELTSKGVSNGNKIDDN-----IEVTIGKL 121 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLH 214 + +H + +L RF AY D ++ ++ D I + L N Sbjct: 122 KVNFKWVKH-PVPTLAMRFEEDGKVFAYSGDTEWC-EGVIDIAKDADLFICETNLYNNEF 179 Query: 215 SS---HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 H + E K + N K +L+H+ + D ++K V A+ G+ F Sbjct: 180 GKVKGHLTAGEVGKIASMNNVKKLVLSHLPHYGNLDDLVKEAKEEFNGEVYKAYSGLSFE 239 Query: 268 S 268 Sbjct: 240 L 240 >gi|27378993|ref|NP_770522.1| hypothetical protein blr3882 [Bradyrhizobium japonicum USDA 110] gi|41017552|sp|Q89NF8|RNZ_BRAJA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|27352143|dbj|BAC49147.1| blr3882 [Bradyrhizobium japonicum USDA 110] Length = 301 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 91/310 (29%), Gaps = 91/310 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG AS VP R +L + +++D G Sbjct: 2 FALTFLGTSAS--VPSA--------------ERNHPALLVEAAG-----KRILIDCGEGT 40 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPI-DVYAAPDCMKHLFE 120 Q+LR +D +L TH H DH+ GI GL L+Q + ++ P + + Sbjct: 41 QRQLLRSGAGFRRLDRILLTHAHLDHVLGIPGLFSTLGLRQSSDVMTIHGGPGTLDIVIR 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 L PI P+ + + G I+ P+ H S GF F Sbjct: 101 ----MLAGLWGAGRAPI--PVEFAALSEGQVIDAGGFTIDCFPVR--HRDTDSFGFVFQS 152 Query: 179 ---------------------------GNVAYCTDVNAFPAESL---------------- 195 G D E + Sbjct: 153 PARRHLLPDRLASLGVPDGPLRGELAQGRPVVIEDGRTIDPEDVLGPATGGRKLVVIGDT 212 Query: 196 -------EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV 242 + + + D L+I+A +S H + +E+ N +LTHM Sbjct: 213 ETTEGLSQYVADADMLVIEATFLDRDASIARDYGHLTAAEAAAFAAANNVGQLVLTHMSG 272 Query: 243 DLDYDMVLKS 252 + + +L Sbjct: 273 RYEDEEILAE 282 >gi|325926250|ref|ZP_08187605.1| metal-dependent hydrolase, beta-lactamase superfamily III [Xanthomonas perforans 91-118] gi|325543337|gb|EGD14765.1| metal-dependent hydrolase, beta-lactamase superfamily III [Xanthomonas perforans 91-118] Length = 263 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 76/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+++ + + + TH H+DH + + + P+ Sbjct: 12 DGQPYLIDCGNGVAQQLVKAGMRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 71 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F A++ + PP I + D P + Sbjct: 72 LYGPPG-----IARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTV-LKNDQ 125 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF +V + D PA + E +N D L+ + A Sbjct: 126 VTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALA-EFAKNTDVLVHEVMYLPA 184 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E N K +L H D + Sbjct: 185 LQTMLKANDNAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSE 244 Query: 256 RVVPAFDG 263 + G Sbjct: 245 GARKHYTG 252 >gi|47567562|ref|ZP_00238273.1| metal-dependent hydrolase [Bacillus cereus G9241] gi|47555757|gb|EAL14097.1| metal-dependent hydrolase [Bacillus cereus G9241] Length = 244 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFNSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|69246416|ref|ZP_00603938.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257879331|ref|ZP_05658984.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257881853|ref|ZP_05661506.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257890157|ref|ZP_05669810.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257893485|ref|ZP_05673138.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|258615737|ref|ZP_05713507.1| hypothetical protein EfaeD_08497 [Enterococcus faecium DO] gi|260558773|ref|ZP_05830962.1| conserved hypothetical protein [Enterococcus faecium C68] gi|293550603|ref|ZP_06673271.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|293559567|ref|ZP_06676101.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|294621775|ref|ZP_06700935.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|314937907|ref|ZP_07845223.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|314941398|ref|ZP_07848291.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|314948547|ref|ZP_07851927.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] gi|314951302|ref|ZP_07854356.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|314992867|ref|ZP_07858268.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|314998071|ref|ZP_07862959.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|68195288|gb|EAN09740.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257813559|gb|EEV42317.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|257817511|gb|EEV44839.1| conserved hypothetical protein [Enterococcus faecium 1,231,502] gi|257826517|gb|EEV53143.1| conserved hypothetical protein [Enterococcus faecium 1,231,410] gi|257829864|gb|EEV56471.1| conserved hypothetical protein [Enterococcus faecium 1,231,408] gi|260075232|gb|EEW63545.1| conserved hypothetical protein [Enterococcus faecium C68] gi|291598662|gb|EFF29719.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291603224|gb|EFF33408.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|291606443|gb|EFF35843.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|313587913|gb|EFR66758.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|313592671|gb|EFR71516.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|313596519|gb|EFR75364.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|313599821|gb|EFR78664.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|313642765|gb|EFS07345.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|313645044|gb|EFS09624.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] Length = 246 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 74/213 (34%), Gaps = 23/213 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G +++ L +DAV+ +H H DHI + L+ Y+ + Sbjct: 25 QSDGFNLLIDAGSATLIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR--- 81 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ + ++ D + + V + + + G + H Sbjct: 82 --NPETLLSIYG------HTKDSIHFEELTLENVSKGHPYFEAEELKIGPFLITFMETIH 133 Query: 169 GRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFS 219 + R + D + + + ++ D + D N H +HF+ Sbjct: 134 -PVVCYAMRIVEETTGKVFVFTGD-SGYLESFADFAKDADLFLADTYLFEGNEHHHAHFT 191 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 E+ + + N K +LTH+ D + + Sbjct: 192 SKEAGELAKSANVKKLVLTHLPQFGDLEQLKNE 224 >gi|257414060|ref|ZP_04745120.2| VicX protein [Roseburia intestinalis L1-82] gi|257201329|gb|EEU99613.1| VicX protein [Roseburia intestinalis L1-82] Length = 249 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 37/179 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQK 103 V++D G + + SID VL TH H DHI G+ + ++ Sbjct: 4 DENHVLIDAGISGKR---IENGLNSIDLKTEEMQGVLVTHEHIDHISGLG-----VIARR 55 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + +++ + I D P + G + P Sbjct: 56 YGLPIYATQGTIDAILNTKS--VGKIEESLFHAI-------TPDQPFEI----GDLLIEP 102 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 I H + ++ N A TD+ + ++K++NLD L+++A H H Sbjct: 103 ISISHDAADPVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEA----NHDVHM 157 >gi|255656522|ref|ZP_05401931.1| ribonuclease Z [Clostridium difficile QCD-23m63] gi|296450028|ref|ZP_06891791.1| ribonuclease Z [Clostridium difficile NAP08] gi|296878409|ref|ZP_06902416.1| ribonuclease Z [Clostridium difficile NAP07] gi|296261133|gb|EFH07965.1| ribonuclease Z [Clostridium difficile NAP08] gi|296430590|gb|EFH16430.1| ribonuclease Z [Clostridium difficile NAP07] Length = 305 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 98/306 (32%), Gaps = 102/306 (33%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG VP R SS+ I+ ++VD G + Sbjct: 4 LTLLGCG--GNVPMPN--------------RFLSSVFINYKG-----RKILVDCGEGTQV 42 Query: 67 QVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--------PIDVYAAPDCMK 116 + + ID + TH H DHI G+ GL R PI + M+ Sbjct: 43 SMKLKKCGFKDIDLICITHLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPIGIVDCIRSMR 102 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 +L E Y K +++ ++ V+ N +E I +H I LG+ Sbjct: 103 NLVEYIPYTLKIIENPQGSFSLDNKVLRN-------------LEISTISLEHS-IECLGY 148 Query: 177 RFG-----------------------------NVA-----YCTD---------------V 187 F N+ Y D Sbjct: 149 SFNFRRNPKFDIDKATKNEVPKILWNKLQEGQNIVLDSKKYTPDMVLGELRKGVKISLTT 208 Query: 188 NAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + P ES+ + ++N D I +A + + + H + E+ +L N K +LTH Sbjct: 209 DTRPIESIPDFIKNSDLFICEAMYGDDLDISKAVRNKHMTFREAANLAKLGNVKQLLLTH 268 Query: 240 MHVDLD 245 LD Sbjct: 269 FSPSLD 274 >gi|42780263|ref|NP_977510.1| hypothetical protein BCE_1188 [Bacillus cereus ATCC 10987] gi|42736182|gb|AAS40118.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 244 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 74/235 (31%), Gaps = 31/235 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQ------------ 72 Query: 109 YA---APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 YA + L E Y D+ + + + + G + Sbjct: 73 YARLITSATKRQLPELLIY-GHTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSISFLK 131 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----H 217 H ++ R V Y D + P + ++ D I + + H Sbjct: 132 TVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAKAGH 189 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 + +E + N K +LTH+ + ++ + A G ++S Sbjct: 190 MNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|292489547|ref|YP_003532435.1| Coenzyme PQQ synthesis protein B [Erwinia amylovora CFBP1430] gi|292898237|ref|YP_003537606.1| coenzyme PQQ synthesis protein B [Erwinia amylovora ATCC 49946] gi|291198085|emb|CBJ45188.1| coenzyme PQQ synthesis protein B (pyrroloquinoline quinon biosynthesis protein B) [Erwinia amylovora ATCC 49946] gi|291554982|emb|CBA22993.1| Coenzyme PQQ synthesis protein B [Erwinia amylovora CFBP1430] Length = 303 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 94/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C +N RT+SS+ +S V+ Sbjct: 1 MKIKVLGSAAGGGFPQWNCYCPNCQ--GVRNGSIRATARTQSSIAVSDNGSDW----VLC 54 Query: 59 DTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ L I +++ T DH G+ L++ P V+ Sbjct: 55 NASPDICHQIAANPELHPQGKLRGSGIGSIILTDSQIDHCTGL-----LNLREGCPHHVW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L F F L + + I+ AIPIL Sbjct: 110 CTAEVHADLTSGFP-IFTMLQH--WNGGLVHHAIQLAQPFSVAVCPALRFTAIPILSNAP 166 Query: 170 RISSLGFR----------FGNVA------YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 S R N A Y + A+ L+ + D L++D Sbjct: 167 PYSPYRGRPLPGHNIALMIENTASGSKLLYAPGLGEPDAQLLDLMSQADCLLVDGTLWQD 226 Query: 210 ----------KNGLHSSHFSLSE---SLKKIELINPKNAILTHMHVD---LDY--DMVLK 251 G H +L E + + + IL H++ LD L Sbjct: 227 NELANTGVGRNTGRDMGHLALDEDRGLMALLGDLPAPRKILIHINNTNPILDESSAERLA 286 Query: 252 STPSRVVPAFDGMQFSS 268 + + ++DGM Sbjct: 287 LSARGIEVSYDGMSIEL 303 >gi|218440940|ref|YP_002379269.1| beta-lactamase [Cyanothece sp. PCC 7424] gi|218173668|gb|ACK72401.1| beta-lactamase domain protein [Cyanothece sp. PCC 7424] Length = 296 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 82/261 (31%), Gaps = 43/261 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S + + + +I D G + + L Q+ + +TH H DHI G F+ Sbjct: 34 SCIEMKVGSHRLIFDGGTGIRILGESLLSQLPVEGHLFFTHSHWDHIQGFPFFVPAFIP- 92 Query: 103 KRPIDVYA----APDCM-KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +Y M + L + + P + ++ D + Sbjct: 93 GNQFYIYGMPSPNGATMQQRLHDQM-----LHPNFPVPLQIMQAQLKFYDFEVGESIPID 147 Query: 158 VIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDAL 209 I H ++G+R VAY TD FP L +N D +IIDA Sbjct: 148 DIVIETAPLNHPG-QAIGYRVNWRGLAVAYITDTEHFPGRLDENVLRLSRNADLVIIDAT 206 Query: 210 KNGL----------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM-------VLKS 252 H + E++K + K +L H D +D S Sbjct: 207 YTDEEYYNEKSSKIGWGHSTWQEAVKIAKAAKIKELVL--FHHDPSHDDDFLDVIGEKAS 264 Query: 253 TP-SRVVPAFDGMQFSS-PIP 271 + A +G+ P P Sbjct: 265 LAFPNTILAREGLSLELIPEP 285 >gi|259907248|ref|YP_002647604.1| pyrroloquinoline quinone biosynthesis protein PqqB [Erwinia pyrifoliae Ep1/96] gi|224962870|emb|CAX54350.1| Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) [Erwinia pyrifoliae Ep1/96] gi|283477059|emb|CAY72951.1| Coenzyme PQQ synthesis protein B [Erwinia pyrifoliae DSM 12163] Length = 303 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 92/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C +N RT+SS+ +S V+ Sbjct: 1 MKIKVLGSAAGGGFPQWNCYCRNCQ--GVRNGSISATARTQSSIAVSDNGRDW----VLC 54 Query: 59 DTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ L I +++ T DH G+ LR Q V+ Sbjct: 55 NASPDICHQIAANPELHQPGALRGSAIGSIILTDSQIDHCTGLLNLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ L F F L + + I+ AIPIL Sbjct: 110 CTPEVYADLTSGFP-IFTMLQH--WNGGLAHHAIQPAQPFSVAVCPALRFTAIPILSNAP 166 Query: 170 RISSLGFR----------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 S R + Y + A L+ + D L+ID Sbjct: 167 PYSPFRGRPLPGHNIALMIEDTSSGSKLLYAPGLGEPDAPLLDLMSQADCLLIDGTLWQD 226 Query: 210 ----------KNGLHSSHFSLSE---SLKKIELINPKNAILTHMHVD---LDYDMVLK-- 251 G H +L E + + + IL H++ LD + Sbjct: 227 NELANTGVGRNTGRDMGHLALGEDRGLMALLNDLPAPRKILIHINNTNPILDESSAERLS 286 Query: 252 STPSRVVPAFDGMQFSS 268 T + ++DGM Sbjct: 287 LTARGIEVSYDGMSIEL 303 >gi|304314168|ref|YP_003849315.1| ribonuclease Z [Methanothermobacter marburgensis str. Marburg] gi|302587627|gb|ADL58002.1| predicted ribonuclease Z [Methanothermobacter marburgensis str. Marburg] Length = 306 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 98/324 (30%), Gaps = 87/324 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG ++ VP KN R +S+ + E + D G Sbjct: 1 MEVTFLGTSSA--VP-------------SKN-RNHTSIALRIPGE-----VFLFDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAP---DCMKH 117 Q+ + + + TH H DHI GI G+ F ++ P+++Y P + + Sbjct: 40 QRQMAIAGISPMKVTRMFITHLHGDHILGIPGMIQSMGFRGRQEPLEIYGPPGIHELHES 99 Query: 118 LFE--------------------------------------SFRYCFKALDDRTYPPIVN 139 + + + YCF +++ P + Sbjct: 100 IMKLGYFTLDFDIHVHEVKGGTVLEEEDYRITSAPASHSVFNLAYCF---EEKKRPRFLR 156 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRI---SSLGF--RFGNVAYCTDVNAFPAES 194 IE P + G + IP+ I LG R + Y D Sbjct: 157 EKAIELGLKPGP--AFGKLHRGIPVRVGDRIIKPEEVLGSPRRGVKICYSGDTRPC-ESV 213 Query: 195 LEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 ++ + D LI + S H + E+ + + ILTH+ Sbjct: 214 IDLAREADLLIHESTFEAGSEDKAAESGHSTAREAAEVAASACVRRLILTHLSTRYKRTE 273 Query: 249 VLKSTPSRVVP----AFDGMQFSS 268 V+ + V P A D M Sbjct: 274 VILNAAREVFPETDVADDLMTVEV 297 >gi|295109831|emb|CBL23784.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus obeum A2-162] Length = 265 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 85/231 (36%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT V+VDTG + + L +D +L TH H+DHI G+ + +K I Sbjct: 20 ENTHVLVDTGISGKKMEAGLNSLDLTGRDLDGILITHEHSDHIKGLG-----VISRKYGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + K D +++ G + P Sbjct: 75 PIYTTGGTVDAMVRTNA-LGKIPDGI------------FHEIKEDEPFEIGDLTVNPFSI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H +G+R +V TD+ + +E LQNLD L+++A L+ G + Sbjct: 122 PHDAAQPVGYRLECDGHSVGIATDLGKYNDYIIENLQNLDALLLEANHDIRMLQVGRYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + N K L H+ + +Y+ + T Sbjct: 182 YLKQRILGERGHLSNENAGRLLCRLLHDNMKAIFLGHLSRENNYEDLAYET 232 >gi|156935142|ref|YP_001439058.1| pyrroloquinoline quinone biosynthesis protein PqqB [Cronobacter sakazakii ATCC BAA-894] gi|156533396|gb|ABU78222.1| hypothetical protein ESA_02993 [Cronobacter sakazakii ATCC BAA-894] Length = 302 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 100/316 (31%), Gaps = 66/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C + RT+SS+ +S + V+ + Sbjct: 1 MQIKVLGSAAGGGFPQWNCNCANCQGVRNGTMKTSARTQSSIAVSDDGKNW----VLCNV 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L L I A++ T DH G+ L++ P V+ Sbjct: 57 SPDICHQLLASPELHNPGVLRGTGIGAIILTDSQIDHSAGL-----LNLREGCPHHVWCT 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P+ L F F L + + I G AIP+L Sbjct: 112 PEVHDDLCTGFP-VFPML--SHWNGGLIHHPIAPLSRFQVRVCPGVHFTAIPLLSNAPPY 168 Query: 172 SSLGFR---------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---- 212 S R ++ Y + L L+ D L+ID Sbjct: 169 SPYRDRPLPGHNVALFIEEEGGKSLLYAPGLGEPDDAILPWLERADVLLIDGTLWRDNEL 228 Query: 213 -----LHSS-----HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPS---- 255 H++ H +LSE + + + IL H++ ++ +++P Sbjct: 229 AATGVGHNTGKAMGHLALSEEQGLAALLARLPAERKILIHINNTNP--ILNEASPERQSL 286 Query: 256 ---RVVPAFDGMQFSS 268 + + DGM + Sbjct: 287 HQLGIEVSHDGMVIAL 302 >gi|109900205|ref|YP_663460.1| beta-lactamase-like [Pseudoalteromonas atlantica T6c] gi|109702486|gb|ABG42406.1| beta-lactamase-like protein [Pseudoalteromonas atlantica T6c] Length = 309 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 53/271 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D +LG G +P +R+ S+ I ++T +VD G Sbjct: 29 SDITKVVMLGTGT----------------PHPSPQRSGPSVAIVV-----NDTPYLVDFG 67 Query: 62 PDFYMQVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDV 108 P + ++ ++ TH H+DH G+ L + + +K P+++ Sbjct: 68 PGVVRRAASMSPVYGGPIDGLKITKLNRAFLTHMHSDHTAGLADLVLTPWAMGRKSPLEI 127 Query: 109 YAAPDCMK---HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 Y + +L +++ K P + + V + + Sbjct: 128 YGPEGVVDMSKNLLKAYDQDIKYRLYGLQPANNQGWRVNAHAVKEGVVYKDENVTVEAFP 187 Query: 166 QQHGRIS-SLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------L 209 +HG + G+RF V + A S++ +N D LI + Sbjct: 188 VKHGSWPDAFGYRFTTPDRVIVVSGDKAPDGNSIKYSKNADILIHEVYSDEGKKSLSKFW 247 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +N ++H S E K + N K +L H+ Sbjct: 248 QNYHSNNHTSGIELGKIAQESNVKKLVLYHI 278 >gi|225863051|ref|YP_002748429.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|229183400|ref|ZP_04310626.1| Beta-lactamase domain protein [Bacillus cereus BGSC 6E1] gi|225790860|gb|ACO31077.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|228600076|gb|EEK57670.1| Beta-lactamase domain protein [Bacillus cereus BGSC 6E1] Length = 244 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + +++D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDAVVYSADSSYIPEF-IPFTKDVDLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|126179838|ref|YP_001047803.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862632|gb|ABN57821.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 261 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 86/242 (35%), Gaps = 53/242 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 RG +++D G + R I+A+L TH H DHI G+D L ++ Sbjct: 18 RGERGALLIDAGLSAREILRRLEAAGGDPTFIEAILVTHEHIDHIRGVD-----VLARRL 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA ++ + P + E + G P Sbjct: 73 GVPVYATGGTLEA----------------FTPKCSGRSAEVRRCRCGETFSVGDFSIEPF 116 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLH 214 H GF + CTD +KL + D +++ D L+NG + Sbjct: 117 AASHDAREPCGFSVAEGDLRIGCCTDTGTVTTSMFDKLASCDAVLLESNHCPDMLENGPY 176 Query: 215 SS-----------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP-AFD 262 + H S ++ + ++ + + HM + L + + +TP +V+ A + Sbjct: 177 PAYLKSRIRSKRGHLSNPDAARCLQRLADR----IHMAM-LAHVSEINNTPEKVLLSALE 231 Query: 263 GM 264 G+ Sbjct: 232 GL 233 >gi|260596665|ref|YP_003209236.1| pyrroloquinoline quinone biosynthesis protein PqqB [Cronobacter turicensis z3032] gi|260215842|emb|CBA28327.1| Coenzyme PQQ synthesis protein B [Cronobacter turicensis z3032] Length = 302 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 101/318 (31%), Gaps = 70/318 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ + C +N RT+SS+ +S + V+ Sbjct: 1 MQIKVLGSAAGGGFPQWNCNCANCQ--GVRNGTMKTAARTQSSIAVSDDGKNW----VLC 54 Query: 59 DTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+L L I A++ T DH G+ L++ P V+ Sbjct: 55 NVSPDICHQLLASPELHNPGVLRGTGIGAIILTDSQIDHSAGL-----LNLREGCPHHVW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ L F F L + + I G AIP+L Sbjct: 110 CTPEVHDDLCTGFP-VFPML--SHWNGGLLHHPIAPLSRFQVRVCPGVHFTAIPLLSNAP 166 Query: 170 RISSLGFR---------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-- 212 S R ++ Y + L L+ D L+ID Sbjct: 167 PYSPYRDRPLPGHNVALFIEEEGGKSLLYAPGLGEPDDAILPWLERADVLLIDGTLWRDN 226 Query: 213 -------LHSS-----HFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTPS-- 255 H++ H +LSE + + + IL H++ ++ +++P Sbjct: 227 ELAATGVGHNTGKAMGHLALSEEQGLAALLARLPAERKILIHINNTNP--ILNEASPERQ 284 Query: 256 -----RVVPAFDGMQFSS 268 + + DGM + Sbjct: 285 SLHQLGIEVSHDGMVIAL 302 >gi|146338545|ref|YP_001203593.1| ribonuclease Z [Bradyrhizobium sp. ORS278] gi|166991096|sp|A4YN80|RNZ_BRASO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|146191351|emb|CAL75356.1| Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Bradyrhizobium sp. ORS278] Length = 301 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 59/179 (32%), Gaps = 35/179 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + LG AS+ P + R L + +R ++VD G Sbjct: 2 FELIFLGTSASV----------------PSHDRNHPGLLVQAGGQR-----ILVDCGEGI 40 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDCMKHLF 119 Q+L +D +L TH H DH+ GI GL L+ +R + V+ +P + + Sbjct: 41 QRQLLASGAGFRRLDRILLTHGHLDHVLGIPGLFS-TLRLRRSADVMSVHGSPGTIDVVI 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 L PI +E + G +H S GF F Sbjct: 100 R----MLAGLWGDGRAPIP----LELVPLTPGQVLDAGAFTINCFAVRHRDTDSFGFEF 150 >gi|261418911|ref|YP_003252593.1| beta-lactamase [Geobacillus sp. Y412MC61] gi|319765728|ref|YP_004131229.1| beta-lactamase [Geobacillus sp. Y412MC52] gi|261375368|gb|ACX78111.1| beta-lactamase domain protein [Geobacillus sp. Y412MC61] gi|317110594|gb|ADU93086.1| beta-lactamase domain protein [Geobacillus sp. Y412MC52] Length = 244 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 37/236 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V ++DAV+ +H H DHI I L+ L K Sbjct: 25 EHDGFCLLVDCGSGALAKLQNYTAVENLDAVIISHYHYDHIADIGPLQYARLIHKNLGAD 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + E A G Sbjct: 85 LPVLPIYG----------------HVEDEAAFSRLTHSGITEGISYDPNGTLAVGPFSIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R V Y D + P L + D LI + +N Sbjct: 129 FMKTVH-PVPCYAMRITAGGKTVVYTADSSYIPEF-LPFAKGADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGMQF 266 + H + E+ E LTH+ ++ +++ + A G+ + Sbjct: 187 AGHMTSEEAAAIAEGARVGELWLTHLPHVGRHEQLVEEAGRTFRGVIRLARTGLTW 242 >gi|330508986|ref|YP_004385414.1| beta-lactamase domain-containing protein [Methanosaeta concilii GP-6] gi|328929794|gb|AEB69596.1| beta-lactamase domain protein [Methanosaeta concilii GP-6] Length = 246 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 50 RGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I+D G Q + + + + +H H DHI G+ L + Q + Sbjct: 25 NSEKYHIILDAGNGISKADQYIDDDLPV--YLFLSHFHLDHIEGLHILNKFHFSQG--LK 80 Query: 108 VYAAPDCMKHLFESFRYCF-KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++ + L F L+ YP V ++ +P ++ + A P Sbjct: 81 IFGQKGTREVLNTIVNDPFTVPLEKLPYPVEVGELLPGPYKMPFALECEFL-LHASP--- 136 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HF 218 +LG+RF +AYC D ++ + D LI + SS H Sbjct: 137 ------TLGYRFDLEGKIIAYCPDT-GICEGAVHLAGDSDLLIAECSHKPGESSPAWPHL 189 Query: 219 SLSESLKKIELINPKNAILTH 239 + ++ K LTH Sbjct: 190 NPQDAADIARRAGAKRLALTH 210 >gi|126466127|ref|YP_001041236.1| RNAse Z [Staphylothermus marinus F1] gi|126014950|gb|ABN70328.1| RNAse Z [Staphylothermus marinus F1] Length = 251 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 85/247 (34%), Gaps = 47/247 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA++ P +R R + ++D G ++ Sbjct: 7 MLGTGAAM----------------PISRGLPCIAL------RIDSNIYLLDVGEGCQQRL 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-APDCMKHLFESFRYC 125 + + I+AV+ TH H DH G+ G+ R ++Y AP +K L + F Sbjct: 45 FKAGLGLVKINAVMITHLHGDHYLGLFGMFQSMHLSNRKNELYLIAPAKLKDLLKEFIEL 104 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GN 180 L YP +E + + S I HG I + G+ Sbjct: 105 --GLAKIEYP----LYFVEAREGELYRDS---KISVEAFKVVHG-IEAYGYILMLKNGKR 154 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGL-HSSHFSLSESLKKIELINPKN 234 + Y D F E +N D LI +A L+ H + +++ K Sbjct: 155 IVYTGDTKPF-EELESIAKNADILIHEATFTSDLRKEAWEQGHSTAADAAITAYKAGVKE 213 Query: 235 AILTHMH 241 +LTH+ Sbjct: 214 LVLTHIS 220 >gi|254976130|ref|ZP_05272602.1| ribonuclease Z [Clostridium difficile QCD-66c26] gi|255093520|ref|ZP_05322998.1| ribonuclease Z [Clostridium difficile CIP 107932] gi|255315262|ref|ZP_05356845.1| ribonuclease Z [Clostridium difficile QCD-76w55] gi|255517931|ref|ZP_05385607.1| ribonuclease Z [Clostridium difficile QCD-97b34] gi|255651047|ref|ZP_05397949.1| ribonuclease Z [Clostridium difficile QCD-37x79] gi|260684114|ref|YP_003215399.1| ribonuclease Z [Clostridium difficile CD196] gi|260687772|ref|YP_003218906.1| ribonuclease Z [Clostridium difficile R20291] gi|306520907|ref|ZP_07407254.1| ribonuclease Z [Clostridium difficile QCD-32g58] gi|260210277|emb|CBA64561.1| ribonuclease Z [Clostridium difficile CD196] gi|260213789|emb|CBE05740.1| ribonuclease Z [Clostridium difficile R20291] Length = 305 Score = 70.5 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 96/307 (31%), Gaps = 104/307 (33%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG VP R SS+ I+ +++D G + Sbjct: 4 LTLLGCG--GNVPMPN--------------RFLSSVFINYKG-----RKILIDCGEGTQV 42 Query: 67 QVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--------PIDVYAAPDCMK 116 + + ID + TH H DHI G+ GL R P+ + M+ Sbjct: 43 SMKLKKCGFKDIDLICITHLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMR 102 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLG 175 +L E Y K +IEN + + +E I +H I LG Sbjct: 103 NLVEYVPYTLK--------------IIENPQGNFSLDNKVLRNLEISTISLEHS-IECLG 147 Query: 176 FRFG-----------------------------NVA-----YCTD--------------- 186 + F N+ Y D Sbjct: 148 YSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQNIVLNSKQYTPDMVLGELRKGVKISLT 207 Query: 187 VNAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILT 238 + P ES+ + +++ D I +A + + + H + E+ +L N K +LT Sbjct: 208 TDTRPIESIPDFIKDSDLFICEAMYGDDLDISKAVRNKHMTFREAANLAKLGNVKQLLLT 267 Query: 239 HMHVDLD 245 H LD Sbjct: 268 HFSPSLD 274 >gi|78048699|ref|YP_364874.1| putative metallo-beta-lactamase superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037129|emb|CAJ24874.1| putative metallo-beta-lactamase superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 335 Score = 70.5 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + + + TH H+DH + + + P+ Sbjct: 84 DGQPYLIDCGNGVAQQLAKAGMRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 143 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F A++ + PP I + D P + Sbjct: 144 LYGPPG-----IARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTV-LKNDQ 197 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF +V + D PA + E +N D L+ + A Sbjct: 198 VTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALA-EFAKNTDVLVHEVMYLPA 256 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E N K +L H D + Sbjct: 257 LQTMLKANDNAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSE 316 Query: 256 RVVPAFDG 263 + G Sbjct: 317 GARKHYAG 324 >gi|291336457|gb|ADD96011.1| hypothetical protein GAU_1192 [uncultured organism MedDCM-OCT-S04-C138] Length = 225 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 83/226 (36%), Gaps = 29/226 (12%) Query: 57 IVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL------RGYFLKQKRPIDV 108 ++D P + + +DA+ +H H DHI G+ L +++P + Sbjct: 1 MLDCAPSAIYRLAADGHNWAELDAIWISHFHLDHIGGLAPLLFSTKYAPETQSRRKPQRI 60 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + P ++ + F + Y + P +E +V + G ++A I H Sbjct: 61 FGPPG-LREILGHFDAAY------DYGLLKQPYPVEIIEVKDEFEILPG-LKANTISTPH 112 Query: 169 GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLS 221 SL R + + + +D F D I + ++ H LS Sbjct: 113 -TAESLAIRLESSEGASLVFTSDT-GFSPAVARFAGGCDLFITECSFIREKPVIQHLELS 170 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLK----STPSRVVPAFDG 263 E+++ + PK A+LTH + + D P ++ A DG Sbjct: 171 EAMEMFRIAEPKRAMLTHFYPEWDNADFTALTKGQAPCEILEAVDG 216 >gi|60594108|pdb|1Y44|A Chain A, Crystal Structure Of Rnase Z gi|60594109|pdb|1Y44|B Chain B, Crystal Structure Of Rnase Z Length = 320 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 103/328 (31%), Gaps = 88/328 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG GA G+P +N +S+ + + ER + + D G Sbjct: 2 ELLFLGTGA--GIP-----------AKARNV---TSVALKLLEER--RSVWLFDCGEATQ 43 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA---------- 111 Q L + I+ + TH H DH++G+ GL G Q + VY Sbjct: 44 HQXLHTTIKPRKIEKIFITHXHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETS 103 Query: 112 -PDCMKHLF------------------------------ESFRYCFKALDDRTYPPIVNP 140 HL E+F Y + ++ P + Sbjct: 104 LAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGY---RVQEKDVPGSLKA 160 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-------FRFGNVAYCTDVNAFPAE 193 V++ ++P + + + GRI G + +V + D + Sbjct: 161 DVLKEXNIPPGPVYQKIK-KGETVTLEDGRI-INGNDFLEPPKKGRSVVFSGDT-RVSDK 217 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH--VDLD 245 E ++ D + +A H + ++ + K ILTH+ D Sbjct: 218 LKELARDCDVXVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGD 277 Query: 246 YDMVLKSTPSRVVP----AFDGMQFSSP 269 + L+ V P A+D ++ + P Sbjct: 278 ASLELQKEAVDVFPNSVAAYDFLEVNVP 305 >gi|327309963|ref|YP_004336860.1| beta-lactamase domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326946442|gb|AEA11548.1| beta-lactamase domain protein [Thermoproteus uzoniensis 768-20] Length = 250 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 92/244 (37%), Gaps = 29/244 (11%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDG 94 +R R++ + V+VD G + ++ + ID V TH H DH G+ Sbjct: 17 KRWRAANLLET-----DGGLVVVDCGVGCHYRLSDRGLLTEIDYVFVTHSHMDHFLGLPE 71 Query: 95 --LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + + +++ + V A + + + + K ++ + + I + Sbjct: 72 ALFQAHIEGRRKRLVVVAPKIVARTIEAASPHLLKNINYQ--------LEIRPAAPGPLL 123 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 + +G +EA H + +R ++ + D + + +D L+ +A Sbjct: 124 ELSGLRVEAAQ-ACHHTAEEAYAYRVESGASLVFTGDTSPNCEPVRRLSRGVDVLVHEAT 182 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLD---YDMVLKSTPSRVVPA 260 N + H + +++ + + + + +LTH+ + + V ++ V+ A Sbjct: 183 CNEQNAGVCSKYGHTTTLQAIAEADAVGARLLVLTHIDEGFNPTVHKDVERTGRKDVIVA 242 Query: 261 FDGM 264 D M Sbjct: 243 EDNM 246 >gi|15601904|ref|NP_244976.1| Ars [Pasteurella multocida subsp. multocida str. Pm70] gi|12720242|gb|AAK02123.1| Ars [Pasteurella multocida subsp. multocida str. Pm70] Length = 327 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 32/252 (12%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL- 95 R+S S + +VD G R ++ + +L TH H DHI+ + L Sbjct: 53 RASA--SYLVRENGKAAFLVDFGTGALQNFARSGAKIEDVKGILITHFHVDHINDLPALV 110 Query: 96 -RGYFLKQKRPIDVYAA------PDCMKHLFE------SFRYCFKALDDRTYPPIVNPIV 142 +F + + +Y PD + + ++ Y L I V Sbjct: 111 KASFFSSRHHDLAIYGPTGNEFIPDTEQFITRLLGEKGAYSYLSGFLTGDESYQIQPTSV 170 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL 198 + P+ + + I +HG + +L +R + + D + SL++L Sbjct: 171 PADKTAPMHFHTEIDGFQLSAIATEHGLLPALAWRIEKGGCRIVFSGDTSN-QGNSLDRL 229 Query: 199 -QNLDFLII-DALKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 Q D I +A+ + H SE + + N KN +L+H+ ++ V Sbjct: 230 VQEADLFIAHNAVPETSQDNVANKLHMRPSEIARIAQQGNVKNLLLSHLMRRTEH--VKA 287 Query: 252 STPSRVVPAFDG 263 T + + FDG Sbjct: 288 QTKNIIQARFDG 299 >gi|125808678|ref|XP_001360827.1| GA17222 [Drosophila pseudoobscura pseudoobscura] gi|54635999|gb|EAL25402.1| GA17222 [Drosophila pseudoobscura pseudoobscura] Length = 763 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 109/303 (35%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+ C P +N SS+ I +E +++D G Sbjct: 449 SSYPRIIFLGTGS-------------CIPNKTRNV---SSILIQTAAE----AFMLLDCG 488 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Y Q++R E + + AV +H HADH G+ GL L+++R + A P Sbjct: 489 EGTYGQIVRLYGSARAVEVLRQLQAVYVSHLHADHHIGLIGL----LRERRQLAPKATPL 544 Query: 114 CMKHLFE-----SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + F + + Y + N ++ + + G+ L +H Sbjct: 545 LLLAPRQIEPWLEFYHRQIEEIEDAYTLVGNGELL-ADPLTGEAVEPLGITAISTCLVRH 603 Query: 169 GRISSLGFRFG----------NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG----- 212 +S G + Y D P + +E +N LI +A Sbjct: 604 CT-NSFGVSLTLKAHHDGEPVKITYSGDT--MPCLDLIELGRNSTVLIHEATMEDDLEEE 660 Query: 213 -LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQF 266 +H ++S+++++ + K+ ILTH Y PS +V AFD MQ Sbjct: 661 ARIKTHSTISQAIQQGRNMGAKHTILTHFSQR--YAK-CPRLPSVEDMQQVAIAFDNMQV 717 Query: 267 SSP 269 + Sbjct: 718 TLE 720 >gi|21243721|ref|NP_643303.1| hydrolase [Xanthomonas axonopodis pv. citri str. 306] gi|21109305|gb|AAM37839.1| hydrolase [Xanthomonas axonopodis pv. citri str. 306] Length = 310 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 75/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 +VD G Q+ + + + + TH H+DH + + + P+ Sbjct: 59 DGQPYLVDCGNGVAQQLAKAGIGLPMLRGIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 118 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F A++ + PP I + D P + Sbjct: 119 LYGPPG-----IARMVDAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTV-LTNDQ 172 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF +V + D PA + E +N D L+ + A Sbjct: 173 VTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALA-EFAKNTDVLVHEVMYLPA 231 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E N K +L H D + Sbjct: 232 LQRMLKTNDNAPTLLDHLLKSHSTSEEVGMIAAAANAKMLVLNHFVPGGDASITDAMWSQ 291 Query: 256 RVVPAFDG 263 + G Sbjct: 292 GARKHYAG 299 >gi|227512249|ref|ZP_03942298.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227084527|gb|EEI19839.1| metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] Length = 251 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 73/224 (32%), Gaps = 40/224 (17%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHG 91 P N SS + N ++D G + + L +DA++ TH H DH Sbjct: 18 PANGNGTSSYLLE-----SGNFHFLIDCGSAALLSLEEILDPLKLDALILTHYHHDHTAD 72 Query: 92 IDGLRGYF-----LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 + L+ Y+ ++ + +Y LD + + P + Sbjct: 73 VGVLQYYWQLHEKRYDQKCLPIYG----------------HTLDKINFDGLSWPDSTKGV 116 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQN 200 + G H + + G R +A+ D FP + +N Sbjct: 117 AYDPEKQLDVGPFSITFFKMHH-PVPAFGLRITEKATGKVLAFTADTAYFPEIAY-FARN 174 Query: 201 LDFLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHM 240 D L+ D + H + +ES + + K +LTH+ Sbjct: 175 ADLLMTDT-NFYADKTGTKWHMTSTESGQLAKDAKAKRLLLTHL 217 >gi|83814725|ref|YP_445347.1| metallo-beta-lactamase superfamily protein [Salinibacter ruber DSM 13855] gi|83756119|gb|ABC44232.1| metallo-beta-lactamase superfamily, putative [Salinibacter ruber DSM 13855] Length = 266 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 37/213 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF--YM 66 +LG GA+L P R++ ++ + T++VD G D + Sbjct: 18 LLGTGAALSDPH------------------RTTTMLAVSDDASPANTLVVDCGGDVLQRL 59 Query: 67 QVLREQVLSIDAVLYTHPHADHIHG--IDGLRGYFLKQKRPIDVYAAPDC---MKHLFES 121 Q + +D ++ TH H DH G + + + + RPI V + L+++ Sbjct: 60 QACGRSIDEVDGLIVTHAHMDHASGFPLFMEKIWLDGRDRPIPVCGIEPARAQAQRLWDA 119 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F + D PPI V + P+ ++ HG +++G RF Sbjct: 120 FAPVHEGWDGI--PPIDWRTVPHEHGAPVWTQAP---WAVTAAPVDHGDTANVGLRFEHA 174 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G +AY D + ++ Q D L+ +A Sbjct: 175 GGDGVLAYSCDTAP-TSSVVDLAQGADVLVHEA 206 >gi|203288182|ref|YP_002223197.1| ribonuclease Z [Borrelia recurrentis A1] gi|254808617|sp|B5RQ92|RNZ_BORRA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|201085402|gb|ACH94976.1| ribonuclease Z [Borrelia recurrentis A1] Length = 319 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 104/338 (30%), Gaps = 105/338 (31%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++ ILG G T P + R +S+ I E +++ D G Sbjct: 2 NFNINILGTGG----------------TRPLHNRYLTSVLIEYHGE-----SILFDCGEA 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRPIDVYAAPDCMKH 117 M + ++++ I + TH HADHI G+ G+ +K P+ + K+ Sbjct: 41 TQMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMAQSGDTRKEPLTIIGPIGIKKY 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + + L I+ +I N P+ + IE I + I +G+ Sbjct: 101 LETNI----ELLRVHKNYQIIYKEIIINKTEPVLYEDKRKRIEYIKLKH---SIDCIGYL 153 Query: 178 F------GNV-----------------------------------------------AYC 184 F G AY Sbjct: 154 FIEKDKPGKFDTQKAESLNIPKGPIRKKLQEGYEVILNGRKIVPSEILGEIKKGLKFAYI 213 Query: 185 TDVNAFPAESLEKLQNLDFLII-----DALKNGLHSS-HFSLSESLKKIELINPKNAILT 238 TD F S +QN + +II D LK H + + + + L Sbjct: 214 TDTAYFEELS-TYIQNFNLVIIESTFKDDLKEEAKKKLHLTAKLAAQITKKAKVYQTGLI 272 Query: 239 HMH------VDLDYD---MVLKSTPS-RVVPAFDGMQF 266 H DL Y+ + P+ + A DGM+ Sbjct: 273 HFSERYTLNKDL-YELLNEAQQEYPNGNIFLAKDGMKL 309 >gi|203284649|ref|YP_002222389.1| ribonuclease Z [Borrelia duttonii Ly] gi|254808615|sp|B5RMU7|RNZ_BORDL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|201084092|gb|ACH93683.1| ribonuclease Z [Borrelia duttonii Ly] Length = 319 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 104/338 (30%), Gaps = 105/338 (31%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++ ILG G T P + R +S+ I E +++ D G Sbjct: 2 NFNINILGTGG----------------TRPLHNRYLTSVLIEYHGE-----SILFDCGEA 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFL----KQKRPIDVYAAPDCMKH 117 M + ++++ I + TH HADHI G+ G+ +K P+ + K+ Sbjct: 41 TQMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMAQSGDTRKEPLTIIGPIGIKKY 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + + L I+ +I N P+ + IE I + I +G+ Sbjct: 101 LETNI----ELLRVHKNYQIIYKEIIINKTEPVLYEDKRKRIEYIKLKH---SIDCIGYL 153 Query: 178 F------GNV-----------------------------------------------AYC 184 F G AY Sbjct: 154 FIEKDKPGKFDIQKAESLNIPKGPIRKKLQEGYEVMLNGRKIVPSEILGETKKGLKFAYI 213 Query: 185 TDVNAFPAESLEKLQNLDFLII-----DALKNGLHSS-HFSLSESLKKIELINPKNAILT 238 TD F S +QN + +II D LK H + + + + L Sbjct: 214 TDTAYFEELS-TYIQNFNLVIIESTFKDDLKEEAKKKLHLTAKLAAQITKKAKVYQTGLI 272 Query: 239 HMH------VDLDYD---MVLKSTPS-RVVPAFDGMQF 266 H DL Y+ + P+ + A DGM+ Sbjct: 273 HFSERYTLNKDL-YELLNEAQQEYPNGNIFLAKDGMKL 309 >gi|154686646|ref|YP_001421807.1| ribonuclease Z [Bacillus amyloliquefaciens FZB42] gi|166991093|sp|A7Z6F0|RNZ_BACA2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|154352497|gb|ABS74576.1| Rnz [Bacillus amyloliquefaciens FZB42] Length = 308 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 99/327 (30%), Gaps = 83/327 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA + P R +S+ + + ER + + D G Sbjct: 1 MELLFLGTGAGM----------------PAKTRNVTSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAP-------- 112 Q+L + I+ + TH H DH++G+ GL G Q + +Y Sbjct: 43 QHQILHTTIKPRKIEKIFITHLHGDHVYGLPGLLGSRSFQGGEEELTIYGPKGIKAFIET 102 Query: 113 ---DCMKHLF------------------------------ESFRYCFKALDDRTYPPIVN 139 HL E+F Y + D Sbjct: 103 SLNVTATHLTYPLTVHEIEEGTVFEDEQFIVTAASVIHGVEAFGYRVQEKDIPGALQAGR 162 Query: 140 PIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRFGNV-AYCTDVNAFPAESLEK 197 + P+ K G + +GR + G + A+ D A E Sbjct: 163 LKEMNIPPGPVYQKIKKGETVTLDDGRIINGRDFLEPPKKGRIVAFSGDTRA-SERVTEL 221 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV--------- 242 +N D L+ +A K + H + ++ + + K ILTH+ Sbjct: 222 ARNADVLVHEATFAKEDAKLAHNYYHATTEQAAQTAKKAGAKQLILTHISARYQGESPIE 281 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 L+++ K+ AFD M+ + Sbjct: 282 RLEHE--AKAVFENSKIAFDFMEVTVE 306 >gi|229078390|ref|ZP_04210953.1| Beta-lactamase domain protein [Bacillus cereus Rock4-2] gi|228704931|gb|EEL57354.1| Beta-lactamase domain protein [Bacillus cereus Rock4-2] Length = 244 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 ++VD G Q+ + IDAV+ +H H DH+ I L+ L Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLIMSGAKGQ 84 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRIAAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|288819186|ref|YP_003433534.1| metallo-beta-lactamase family protein [Hydrogenobacter thermophilus TK-6] gi|288788586|dbj|BAI70333.1| metallo-beta-lactamase family protein [Hydrogenobacter thermophilus TK-6] gi|308752768|gb|ADO46251.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6] Length = 251 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 85/234 (36%), Gaps = 38/234 (16%) Query: 54 TTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVY 109 + VD GP Y+ + ++D ++ +H H DH ++ L + + ++ Sbjct: 33 KWIHVDPGPGAFVYLHQMDFDPRNLDLIVLSHIHLDHSADVNSLIESATDGGKRHHVALF 92 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-H 168 A + +D+ P + + + I+ +++ H Sbjct: 93 APRSAFEG------------EDKVILPYLRRRLAYEAFFEEGIILEYMSIKVKAVMKHRH 140 Query: 169 GRISSLGFRF-GNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL--KNGLHSSHFSLSESL 224 + F G + Y T F LE +++ +II+ H H S+ +++ Sbjct: 141 HNTETYALLFNGKLLYVT-CALFENRMLEVYPKHVKVMIINTTLYDKKAHIEHLSVEDAV 199 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRV------------VPAFDGMQF 266 K I+ + P+ AI+TH YD + P V + A DGM+ Sbjct: 200 KLIKEVKPQKAIITH----FGYDFLKSHKPEEVAKHITSLTGIETLAAHDGMEV 249 >gi|238923925|ref|YP_002937441.1| ribonuclease Z [Eubacterium rectale ATCC 33656] gi|238875600|gb|ACR75307.1| ribonuclease Z [Eubacterium rectale ATCC 33656] Length = 250 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 85/232 (36%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G + + D +L TH H DHI G+ + ++ Sbjct: 4 DDCHVLIDAGISGKK--IENGLNEFDMTATDMHGILVTHEHIDHIAGLG-----VMARRY 56 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + + +DD + PI + G IE P+ Sbjct: 57 HMPIYATKATIGAIKCTKS--VGNIDDELFHPI-----------EAGVDFTIGDIEFEPL 103 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +RF N +A TD+ + + KLQNLD L+++A L+ G + Sbjct: 104 HISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTGAY 163 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKS 252 H S S + + + + IL H+ + +Y+ + Sbjct: 164 PYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYE 215 >gi|283798422|ref|ZP_06347575.1| ribonuclease Z [Clostridium sp. M62/1] gi|291073826|gb|EFE11190.1| ribonuclease Z [Clostridium sp. M62/1] gi|295090786|emb|CBK76893.1| RNAse Z [Clostridium cf. saccharolyticum K10] Length = 304 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 89/282 (31%), Gaps = 58/282 (20%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++D G L+E+ ID + +TH HADHI G+ GL Sbjct: 19 WLTSMMTRCDGSNLLIDCGEGT-QVALKEKGWSPKPIDIICFTHYHADHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ P+ V + L F F L + + P VI+ V Sbjct: 78 GNAERTEPVTVIGPKGLERVVGALRMIAPELPFELRFIELSEPREQFSIGPYVIDAYRVQ 137 Query: 150 ICMKSAGGVIEA---------------IP-----------ILQQHGRISSLGFRFG---- 179 + G + IP ++ GRI + G Sbjct: 138 HNVICYGYAVSIPRKGKFDVERARAQEIPQKFWSRLQKGETIEDEGRILTPEMVLGPKRR 197 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELI 230 V YCTD P E ++ D I + + H + E+ Sbjct: 198 GIKVTYCTDTRPVP-VIAEYAKDADLFICEGMYGEDGKEAKAREYKHMTFQEAAGLAREA 256 Query: 231 NPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSS 268 P+ LTH L DY ++ R A DG Sbjct: 257 QPREMWLTHYSPSLTRPDDYADKARAIFPRAKTARDGWSVEL 298 >gi|206968065|ref|ZP_03229021.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228951550|ref|ZP_04113655.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068743|ref|ZP_04202040.1| Beta-lactamase domain protein [Bacillus cereus F65185] gi|206736985|gb|EDZ54132.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228714360|gb|EEL66238.1| Beta-lactamase domain protein [Bacillus cereus F65185] gi|228808115|gb|EEM54629.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 244 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 ++VD G Q+ + IDAV+ +H H DH+ I L+ L Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLIMSGAKGQ 84 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|116749091|ref|YP_845778.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698155|gb|ABK17343.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 254 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 85/262 (32%), Gaps = 43/262 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ACD P +SL I G +V++D G Sbjct: 1 MKITFLGVG------------EACDAILP-----NTSLWIET-GTGGRRCSVMLDCGFTV 42 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLFE 120 + E +DA+ +H H DH G LR + ++ +P+ V P + + Sbjct: 43 PPRYWLQTENPDDLDALWVSHFHGDHFFGTPALLLRFWETRRTKPLVVIGQPGIEQLIRS 102 Query: 121 SFRYCFKA-LDDRTYP----PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 S + L TYP + + + +G + + G + Sbjct: 103 SMDLAYPNFLPKLTYPLEFHTAIPGETMHAAGLDWNFAESGHGQRNLSVRVDDGSEAIF- 161 Query: 176 FRFGNVAYCTDVNAFPA-ESLEKLQNLDFLIIDALK-NGLHSSHFSLSESLKKIELINPK 233 Y D P+ ++LE + ++ +A + + H ++SE + + Sbjct: 162 -------YSGD--GLPSVDTLELARGCALVVHEAFRLDQPTPGHGTVSECIGFARQAGVR 212 Query: 234 NAILTHMHVDLDYDMVLKSTPS 255 L H D P+ Sbjct: 213 RLALVH----FQRDERKTKWPA 230 >gi|134045752|ref|YP_001097238.1| ribonuclease Z [Methanococcus maripaludis C5] gi|166991484|sp|A4FXT9|RNZ_METM5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|132663377|gb|ABO35023.1| RNAse Z [Methanococcus maripaludis C5] Length = 314 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 105/337 (31%), Gaps = 103/337 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R S+ + E + D G + Sbjct: 1 MKLTFLGTGAAI----------------PTKYRAHPSISLKFDGEI-----FLFDCGENT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q++ V I+ + +H H DH+ GI GL F + +P+++Y + K + Sbjct: 40 QRQIIFTDVSPMKINNIFISHLHGDHVLGIPGLLQSIAFQGRTKPLNIYGPEETAKMIKN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------- 169 + ++D YP +N I + + + + + P++ Sbjct: 100 ILNVGYHSID---YP--INVYEISSKTSEKIISTDNYDVFSFPVVHSVPAVAYVFRQVKK 154 Query: 170 ------RISSLGFRFGN--------------------------------VAYCTDVNAFP 191 +++ LG G V Y D P Sbjct: 155 PRMDLEKVNKLGIEIGPDLKRLKDGYNVELNGKIITPEDVTLPPKKGICVGYSGDT--IP 212 Query: 192 AESL-EKLQNLDF--LIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV 242 + L+ L LI +A + H ++ ++L + ILTH+ Sbjct: 213 LNEFADFLKELKCTILIHEATFDKTMDKNAKETLHSTVHDALNIAKRSGANTVILTHISA 272 Query: 243 DLDYDMVLK----------STPS-RVVPAFDGMQFSS 268 YD + P V+ A D M++S Sbjct: 273 R--YDELSAFEKDVVEFKVEHPDLHVLIAEDLMEYSL 307 >gi|327311783|ref|YP_004338680.1| Ribonuclease Z [Thermoproteus uzoniensis 768-20] gi|326948262|gb|AEA13368.1| Ribonuclease Z [Thermoproteus uzoniensis 768-20] Length = 284 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 92/292 (31%), Gaps = 58/292 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G + VPR +RR E V++D G Sbjct: 4 LKLLFLGTGGA--VPR-------------ADRRMP-----GIYLEDWEGHRVLLDAGEGV 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 ++ + S+ V TH H DH+ G+ GL + + V A P L Sbjct: 44 QYALMANGISPASLSYVAITHGHEDHVLGLPGLLSTAKMAGKSLKVLAPPRLASALSRGG 103 Query: 123 RYCFKALDDRTYPPIVNP--IVIENN----DVPICMKSAGGVIEAIP----ILQQHGRIS 172 + DR +E + + K +E P G Sbjct: 104 VEAATSASDRHMSIRCVEVCHTVEACGWLFEWDVGFKLDLSKVEGFPKQALTKLIRGEAV 163 Query: 173 SLGFRF---GNVA-----------YCTDVNAFPAESLEKLQNLDFLIIDAL------KNG 212 +G R +VA Y D P ++LE + D LI +A Sbjct: 164 EVGGRVVRPEDVAEPGHRRWRRLFYTGDTGPCP-KALEAVGWTDVLIHEATFADDVEPAK 222 Query: 213 LH-SSHFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKSTPSRVVP 259 H H ++ ++++ + + + ILTH+ D + + S VVP Sbjct: 223 AHEEGHSTVLDAIEAAKALGARLLILTHISARYDDLGRHRALAASYRHAVVP 274 >gi|225869727|ref|YP_002745674.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225699131|emb|CAW92325.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 260 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 + +++D G ++ +E L +DAV+ +H H DH+ + LR Y+ Sbjct: 22 YLVTGHDGFQLLMDAGSRSLNELEKEINPLDLDAVIISHYHPDHVADLGVLRHYYQLYPR 81 Query: 101 KQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +P + +Y + D+ + + P V + + A G Sbjct: 82 HLGKPRLLPIYGHDE----------------DEAEFAKLTLPGVSKGIAYQVDRVEALGP 125 Query: 159 IEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + I H + FR + + D F E + D + D Sbjct: 126 FDITFIKTVH-PVVCYAFRIVERATGQVLVFTGDTGYF-EELADFAAEADVFLADVYLYE 183 Query: 213 ---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + K +LTHM Sbjct: 184 GNEHHMAHLTSKEAGQLASRAKVKRLVLTHM 214 >gi|288559874|ref|YP_003423360.1| ribonuclease Z Rnz [Methanobrevibacter ruminantium M1] gi|288542584|gb|ADC46468.1| ribonuclease Z Rnz [Methanobrevibacter ruminantium M1] Length = 303 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 92/314 (29%), Gaps = 79/314 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG ++ VP + +N +++ I E + D G Sbjct: 1 MEIIFLGTSSA--VP-----------SRERNH---AAIVIREFGE-----VFLFDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 Q + V +D + TH H DHI G+ GL ++R +D+Y M Sbjct: 40 QRQFIEANVSPMKVDKIFITHFHGDHILGLGGLIQSMGLRQREEDLDIYGPRGLKKVMNA 99 Query: 118 LFES--F--------------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + F +Y + + P +IE + A Sbjct: 100 ITHTGYFKIDFNLNIHEIDEGIVVETEKYRIETTKTKHSVPNNAYSIIEKKKPRFIREKA 159 Query: 156 ---GGVIEAIPILQQHG-RISSLGFRFG------------NVAYCTDVNAFPAESLEKLQ 199 G + G + G V Y D + +E + Sbjct: 160 IELGVPVGPAFGKLHRGEEVEIDGKIIKPEQVLGPPRKGLKVTYSGDTRP-SFKLIELAR 218 Query: 200 NLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-DYDMVLK 251 + D LI +A L H H + ++ N ILTH+ ++ ++ + Sbjct: 219 DSDILIHEATFEEEDRLHAYEHD-HSTARDAADIAREANVGKLILTHISPRYQEFSVLER 277 Query: 252 STP---SRVVPAFD 262 V A D Sbjct: 278 EAKEAFDNVEVAED 291 >gi|229171843|ref|ZP_04299413.1| Beta-lactamase domain protein [Bacillus cereus MM3] gi|228611615|gb|EEK68867.1| Beta-lactamase domain protein [Bacillus cereus MM3] Length = 244 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNTSDLVTEAKQIFSGHITLAHSGYIWNS 244 >gi|228992885|ref|ZP_04152810.1| Ribonuclease Z [Bacillus pseudomycoides DSM 12442] gi|228766934|gb|EEM15572.1| Ribonuclease Z [Bacillus pseudomycoides DSM 12442] Length = 307 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 91/312 (29%), Gaps = 91/312 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERGE--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + YP ++E + I + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGIVFEDK--QFHVETKRLSHG-IECFGYRIVE 152 Query: 179 ------------------------------------GNVAYCTDVNAFPAE--------- 193 G V + D P + Sbjct: 153 KDIQGHLLVEKLLEAGVKPGPIFKRLKDGEVVELEDGRVLHGKDFIGPPQKGRIITILGD 212 Query: 194 ------SLEKLQNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNAILTHMH 241 S Q+ D L+ +A + H H + ++ N K ILTH+ Sbjct: 213 TRYCEASKILAQDADILVHEATFAAADEIQAHDYFHSTTEQAASIALQANVKRLILTHIS 272 Query: 242 VDLDYDMVLKST 253 D + Sbjct: 273 SRYQADTYKELL 284 >gi|229061814|ref|ZP_04199147.1| Ribonuclease Z [Bacillus cereus AH603] gi|228717560|gb|EEL69224.1| Ribonuclease Z [Bacillus cereus AH603] Length = 307 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 91/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA--------- 111 Q+L V I+ + TH H DHI G+ GL G Q P+ VY Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 112 ----------------PDCMKHL-----------------FESFRYCFKALDDRTYPPIV 138 + + E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGIVFEDNEFCVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P+ + G + + I Q+ I+ LG + YC Sbjct: 163 KLLGMGVKPGPVFKRLKDGEVVELENGTVLDGKDFIGPPQKGRVITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIAVQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|156381150|ref|XP_001632129.1| predicted protein [Nematostella vectensis] gi|156219180|gb|EDO40066.1| predicted protein [Nematostella vectensis] Length = 270 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 100/296 (33%), Gaps = 64/296 (21%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG GAS ++ +S + + G +++++ D G + Q Sbjct: 2 TFLGTGAS-----------------KMSKLRNTSSML---VQIGVDSSILFDCGDGTFCQ 41 Query: 68 VLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--------PIDVYAA 111 L+ Q + S+ ++ +H H DH G+ L F +QK P+ V Sbjct: 42 -LKHQYGKHTGNVLASLKSIFISHKHIDHHMGLVNL--LFHRQKAALKRKNYEPLVVVGP 98 Query: 112 PDCMKHL------FESFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +K L Y + + + V +N + + +P Sbjct: 99 ERLLKWLEYYNSRRNELHYRYSELTIIEAQEQHWVKSGQCKNQLKDLVSSLGLCKLSVVP 158 Query: 164 ILQ---QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD--FLIIDAL-------KN 211 ++ HG + + + + Y D + + D LI +A K Sbjct: 159 VVHCDDSHGIVIAHASGW-KLVYSGDCS---PSGYLVREGADATLLIHEATFLPDYGEKE 214 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK-STPSRVVPAFDGMQF 266 + H + +++ + + + ILTH + ++K P V AFD M Sbjct: 215 AKLTGHSTTDGAIEVSKRMRARYTILTHFSQRYNLKRIVKCRFPPGVSVAFDHMTV 270 >gi|160872467|ref|ZP_02062599.1| coenzyme PQQ biosynthesis protein B [Rickettsiella grylli] gi|159121266|gb|EDP46604.1| coenzyme PQQ biosynthesis protein B [Rickettsiella grylli] Length = 302 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 103/313 (32%), Gaps = 64/313 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ C K+ RT+SS+ IS S++ ++V+ Sbjct: 1 MRLKILGSAAGGGFPQWNCHCSNCQNVRVKSITTLSRTQSSIAISENSKKW----ILVNA 56 Query: 61 GPDFYMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R + I A++ T DH+ G+ L++ + +Y Sbjct: 57 SPDIRKQLEDFHEAQQTNRLRDSGIWAIILTDSQIDHVAGL-----LSLREAEKLIIYCT 111 Query: 112 PDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + L YC + + EN + + G P Sbjct: 112 EVVREELTYHLPLFEILKNYCVIECNRIHDSHVFTVQGFENLRLT-PIDLPGKSPPYSPY 170 Query: 165 LQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--------LK 210 R ++ + + Y + + +++ N D +++D + Sbjct: 171 RHTPKRGANTALMILDTLTQKTIFYAPAIAQWDEPLFQRMNNADCVLVDGTFWHDDEMSR 230 Query: 211 NGLHSS------HFSLSESLKKIELINP---KNAILTHMHVDL--------DYDMVLKST 253 G+++ H +L+ + +N I+ H++ +Y + Sbjct: 231 TGINNKLAAEMGHCALAGEEGLLSHLNALQKPRKIVIHVNNTNPILNTTSSEYAQLNH-- 288 Query: 254 PSRVVPAFDGMQF 266 + V A+DGM Sbjct: 289 -ANVEIAYDGMDI 300 >gi|302547365|ref|ZP_07299707.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptomyces hygroscopicus ATCC 53653] gi|302464983|gb|EFL28076.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptomyces himastatinicus ATCC 53653] Length = 271 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 93/260 (35%), Gaps = 53/260 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG C P + + S + R +++D GP Sbjct: 1 MQLTVLG----------------CRAGMPADGQPSSGYLVETAGAR-----LLLDCGPGT 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHI-----------HGIDGLRGYFLKQ---KRPIDVY 109 + + S+DAV+ TH H+DH +G+ ++G ++ RP+ +Y Sbjct: 40 AVALGAVAAPTSLDAVVITHFHSDHCYDLLPIGKSLLNGLVEVQGGPPRRTGEFRPVPLY 99 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVN---PIVIENNDVPICMKSAGGVIEAIPILQ 166 P + LF + F P+++ + + + G P Sbjct: 100 V-PSGARELFARWGALFP----VATLPLLDQAFEVAFDVREYTPGTSFRVGDCTVTPREL 154 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS---HFS 219 +H + + G R G++AY D PA + E +D L+ +A + S H S Sbjct: 155 RH-VLPNCGLRVEAPSGSLAYTGDTGVTPALT-ELAAGVDVLLAEATLSEPDDSDHGHLS 212 Query: 220 LSESLKKIELINPKNAILTH 239 +++ + +LTH Sbjct: 213 GTDAGRTAHAAGVGELVLTH 232 >gi|229174819|ref|ZP_04302340.1| Ribonuclease Z [Bacillus cereus MM3] gi|228608651|gb|EEK65952.1| Ribonuclease Z [Bacillus cereus MM3] Length = 307 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 89/300 (29%), Gaps = 91/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRY-----------CFK 127 E F Y Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L + P +++ +V + Q GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELENGTILNGKDFIGPPQKGRIITI---LGDTRYC--- 216 Query: 188 NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 ----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHIS 272 >gi|194753954|ref|XP_001959270.1| GF12130 [Drosophila ananassae] gi|190620568|gb|EDV36092.1| GF12130 [Drosophila ananassae] Length = 768 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 105/294 (35%), Gaps = 58/294 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I ++ V++D G Y Sbjct: 458 KIIFLGTGS-------------CIPNKTRNV---SSILIQTAAD----AYVLLDCGEGTY 497 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-DVYAAPDCMK 116 Q++R + + A+ +H HADH G+ GL K K+ + + Sbjct: 498 GQIVRLYGRSRAETVLAQLQAIYVSHLHADHHIGLIGLLRERRKLKQKVEPLILLAPRQI 557 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + F + +Y + N ++E + + A G+ L +H +S G Sbjct: 558 EPWLEFYNRQIEPIEDSYTLVGNGELLE-SPLTGEKVEALGITAIATCLVRHCP-NSFGI 615 Query: 177 RFG----------NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSHFS 219 + Y D P + +E +N LI +A +H + Sbjct: 616 SLTLAAQHEGEPIKITYSGDT--MPCLDLIELGRNSTVLIHEATMEDDLEEEARVKTHST 673 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSS 268 +S+++++ +N ++ ILTH Y P +V AFD MQ + Sbjct: 674 VSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPDAEDMKQVAIAFDNMQVTV 724 >gi|304405933|ref|ZP_07387591.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304345176|gb|EFM11012.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 268 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 77/228 (33%), Gaps = 51/228 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 TV+VD G Q+L E+ IDA+ TH H+DHI G+ + +K I Sbjct: 22 DEHTVLVDAGLSAKRIDQLLAERGVSGHDIDALFVTHEHSDHIKGLGAVA-----RKFNI 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A + + I G ++ Sbjct: 77 PVFANEATWGAM-----------EKHVGTIAPEKRNIMQTGETFEF----GSMKVQSYPI 121 Query: 167 QHGRISSLGFRFGNVAY----CTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + +G+ F Y TD+ + + + + D L++++ L+ G + Sbjct: 122 SHDAVEPVGYCFTEDGYKLSLATDLGYVSDKVRQHIIDSDVLVLESNHDTEMLRMGRYPW 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 H S + + + + K L H+ LD++++ Sbjct: 182 NIKRRILSDVGHLSNVAAGEALCELMTDRTKRVYLAHLS--LDHNVME 227 >gi|291619324|ref|YP_003522066.1| Rnz [Pantoea ananatis LMG 20103] gi|291154354|gb|ADD78938.1| Rnz [Pantoea ananatis LMG 20103] gi|327395650|dbj|BAK13072.1| ribonuclease Z Rnz [Pantoea ananatis AJ13355] Length = 338 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 95/320 (29%), Gaps = 79/320 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K H T LG G G P + +R +++ +R S S T + D G Sbjct: 33 KHSMHLTFLGTG--GGAPSL--------------QRNVTAIAFTRAS---SGDTWLFDCG 73 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA----PD 113 +Q +R + +D + TH H DHI G+ GL P+ VY Sbjct: 74 EGTQLQFMRSDLKPGKLDKIFITHLHGDHIFGLPGLLTSRSMAGLTTPMTVYGPKGLKAF 133 Query: 114 CMKHLFESFRY-----------CFKALDDRTYPPIVNP---------IVIENNDVPICMK 153 L S Y + LDD + P IE D P + Sbjct: 134 VDSALSLSSSYTDYPLEVIEIAAGEVLDDGEFRVTAWPMNHTIDCFGYRIEQRDKPGFLD 193 Query: 154 SAGGVIEAIP-------ILQQHGRISSLGFRFGNVAYC------------TDVNAFPAES 194 +A E +P + Q G AY D + Sbjct: 194 AARLKAEGVPRGPWYQQLKQGERITLEDGRTIDGAAYLGPSTKGKTLAIFGDTAP-TEVA 252 Query: 195 LEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 L+ N+D ++ DAL + H + ++ + K I TH Sbjct: 253 LQLAANVDVMVHETTLEDALAEKANGRGHSTTVQAATVAKQAGAKRMIATHFSSRYLARD 312 Query: 249 VLKSTPS------RVVPAFD 262 + + A+D Sbjct: 313 MTRLLAECQAIFPETEMAYD 332 >gi|205373950|ref|ZP_03226751.1| ribonuclease Z [Bacillus coahuilensis m4-4] Length = 312 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 63/179 (35%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R SSL + + ER + D G Sbjct: 1 MELLFLGTGA--GVPA--------------KHRNVSSLALKLLQER--KAVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL G Q P+ VY + + E Sbjct: 43 QHQILHTSLKPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGESPVTVYGP----RGIKE 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y +L ++E + I + I L +HG + S GFR Sbjct: 99 ---YILTSLKISGTYLKYPLHILEIEESGIIFED--DQFRVITALLEHG-LPSYGFRIE 151 >gi|126700156|ref|YP_001089053.1| ribonuclease Z [Clostridium difficile 630] gi|255101702|ref|ZP_05330679.1| ribonuclease Z [Clostridium difficile QCD-63q42] gi|255307571|ref|ZP_05351742.1| ribonuclease Z [Clostridium difficile ATCC 43255] gi|123363025|sp|Q182M7|RNZ_CLOD6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|115251593|emb|CAJ69426.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Clostridium difficile] Length = 305 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 96/307 (31%), Gaps = 104/307 (33%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG VP R SS+ I+ +++D G + Sbjct: 4 LTLLGCG--GNVPMPN--------------RFLSSVFINYKG-----RKILIDCGEGTQV 42 Query: 67 QVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--------PIDVYAAPDCMK 116 + + ID + TH H DHI G+ GL R P+ + M+ Sbjct: 43 SMKLKKCGFKDIDLICITHLHGDHIFGLLGLLSTIGNSGRTSDLTIVGPVGIVDCIRSMR 102 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLG 175 +L E Y K +IEN + + +E I +H I LG Sbjct: 103 NLVEYVPYTLK--------------IIENPQGNFSLDNKVLRNLEISTISLEHS-IECLG 147 Query: 176 FRFG-----------------------------NVA-----YCTD--------------- 186 + F N+ Y D Sbjct: 148 YSFNFRRNPKFDIDKATKNEVPKILWNKLQEGQNIVLDSKQYTPDMVLGELRKGVKISLT 207 Query: 187 VNAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILT 238 + P ES+ + +++ D I +A + + + H + E+ +L N K +LT Sbjct: 208 TDTRPIESIPDFIKDSDLFICEAMYGDDLDISKAVRNKHMTFREAANLAKLGNVKQLLLT 267 Query: 239 HMHVDLD 245 H LD Sbjct: 268 HFSPSLD 274 >gi|326792412|ref|YP_004310233.1| ribonuclease Z [Clostridium lentocellum DSM 5427] gi|326543176|gb|ADZ85035.1| ribonuclease Z [Clostridium lentocellum DSM 5427] Length = 303 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 89/280 (31%), Gaps = 60/280 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 ++ + R + +++D G M++L ++D + +TH H DH+ G+ GL Sbjct: 19 YLTAMLARFNGRKLLIDCGEGTQVTMRMLGWGYKTLDVICFTHYHGDHVTGLPGLLLTIN 78 Query: 101 KQKR--PIDVYAAPDCMKHLFE--------SFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 R P+ + P K + +F L + VI VP Sbjct: 79 NTGRTEPLTIIGPPGLRKVVEGLTVVSKDIAFDLELIELSYEKQTLKIGEFVITALPVPH 138 Query: 151 CMKSAGGVIEAIPIL-------------------QQHGRISSLGF------------RFG 179 +K IE + Q G +G R G Sbjct: 139 NVKCFAYTIENYRLPKFMVEKAKANNVPQKYWKRLQQGEEVKVGDDYYTPDLVLGDKRKG 198 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------KNGLHSSHFSLSESLKKIELI 230 V+Y TD E +Q D I + + + H H SE+ + + Sbjct: 199 IKVSYSTDCRPIQELE-ELIQESDLFICEGMYTDDSYLAQVKKH-KHMLASEAAELAKKA 256 Query: 231 NPKNAILTHMHVDLDY-----DMVLKSTPSRVVPAFDGMQ 265 K LTH L D V + P+ V +D M Sbjct: 257 RVKTLWLTHFSPALPQSYINIDKVKEIFPNTVA-GYDRMT 295 >gi|56419202|ref|YP_146520.1| hypothetical protein GK0667 [Geobacillus kaustophilus HTA426] gi|56379044|dbj|BAD74952.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 244 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 73/234 (31%), Gaps = 37/234 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V ++DAV+ +H H DHI I L+ L K Sbjct: 25 EHDGFCLLVDCGSGALAKLQNYTAVENLDAVIISHYHYDHIADIGPLQYARLIHKNLGAD 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + E A G Sbjct: 85 LPVLPIYG----------------HVEDEAAFSRLTHSGITEGIAYDPNGTLAVGPFSIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R V Y D + P L + D LI + +N Sbjct: 129 FMKTVH-PVPCYAMRITAGGKTVVYTADSSYIPEF-LPFAKGADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGM 264 + H + E+ E LTH+ ++ +++ + A G+ Sbjct: 187 AGHMTSEEAAAIAEGARVGELWLTHLPHVGRHEQLVEEAGRTFRGVIRLAHTGL 240 >gi|295084268|emb|CBK65791.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Bacteroides xylanisolvens XB1A] Length = 267 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 74/227 (32%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKTLKDYNILMDSIRAVFITHDHADHIKAVG-----NLGEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + P+ ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKQEPMTLE----DFHIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + +LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAAHYISKAHYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKK-IELINP--KNAILTHMHVDLDYDMVLKST 253 H S S++ + E I+ + L H+ D ++ + T Sbjct: 188 RIASKTGHMSNSDTAEFLAENISEHLRYIWLCHLSKDNNHPELAYKT 234 >gi|289830125|ref|ZP_06547556.1| hypothetical protein Salmonellentericaenterica_25942 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 260 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 73/222 (32%), Gaps = 35/222 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 16 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 75 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 76 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 134 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + H + +RF + + D + FP + Q D L+ +A+ + Sbjct: 135 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHVPSVAK 193 Query: 217 ------------------HFSLSESLKKIELINPKNAILTHM 240 H ++ + K + K +L+H+ Sbjct: 194 LANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHL 235 >gi|253578994|ref|ZP_04856265.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849937|gb|EES77896.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 264 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 85/231 (36%), Gaps = 48/231 (20%) Query: 52 SNTTVIVDTG-PDFY-MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G Q L ID +L TH H+DHI G+ + +K I Sbjct: 20 DNTHLLVDVGISGKRVEQGLNSLELTGKDIDGILITHEHSDHIKGLG-----VIARKHQI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA ++ L + + + I + D P + + P Sbjct: 75 PVYATEGTVEALSHMN---LGKMPEGIFREI-------HEDEPFEIN----DLTVNPFTI 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H +G+R +V TD+ + + LQNLD L+++A L+ G + Sbjct: 121 PHDAAQPVGYRVECGEHSVGIATDLGKYNEYIVGNLQNLDALLLEANHDIRMLQVGKYPY 180 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + N K L H+ + +Y+ + T Sbjct: 181 YLKQRILGDRGHLSNENAGRLLCRLLHDNMKGIFLGHLSRENNYEELAYET 231 >gi|229154762|ref|ZP_04282877.1| Beta-lactamase domain protein [Bacillus cereus ATCC 4342] gi|228628710|gb|EEK85422.1| Beta-lactamase domain protein [Bacillus cereus ATCC 4342] Length = 244 Score = 70.2 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 +IVD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLIVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDESGFNSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|262197410|ref|YP_003268619.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262080757|gb|ACY16726.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 309 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 88/275 (32%), Gaps = 70/275 (25%) Query: 56 VIVDTGPDFY---MQVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +I+D G Q+++ +L +H H DHI G+ K+ + ++ Sbjct: 39 IIIDAGTGLRRLGKQLMQGAFGDGSGTAHLLISHTHWDHIQGLPFFSPL-YKRGNTLHLF 97 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV---IENNDVPICMKSAGGVIEAIPILQ 166 A HL F++ + Y P+ + I +++ G Sbjct: 98 ARQRDDTHLRA----VFESQTEEPYFPVPMASLKADIRFHELIEGQSFDIGKARISCTRL 153 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLE-------------------------- 196 H I ++ +R +V Y +D F LE Sbjct: 154 NHPWI-AIAYRIDADGASVVYASDTAPFRDILLEHEFIAKPPVVGGPLSPADASKLASMR 212 Query: 197 -----KLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV--- 242 Q D LI D ++ H H + ++L+ K +L H Sbjct: 213 EALVGLCQGADVLIYDTQFTQAEYRSRPHWGHSTPDDALEIAFAAKVKTLVLYH--HAPE 270 Query: 243 --DLDYDMVLKST-------PSRVVPAFDGMQFSS 268 D + D +L+ P V+ A++G++ S Sbjct: 271 RTDDEQDAILRECRVKLAGAPFDVMAAYEGLELSI 305 >gi|260584314|ref|ZP_05852061.1| VicX protein [Granulicatella elegans ATCC 700633] gi|260157832|gb|EEW92901.1| VicX protein [Granulicatella elegans ATCC 700633] Length = 268 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 78/240 (32%), Gaps = 48/240 (20%) Query: 52 SNTTVIVDTGPD---FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G Q+ + V ID +L TH H DHI GI L +K + Sbjct: 25 PQRKILVDCGLTGKAIAAQMEKIGRSVADIDTILVTHEHVDHIKGIG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + K + P V G I+ + Sbjct: 80 DIYANEKTWKAMENKNIGVIKQEQKHLFEPGVTK--------------TFGDIDVMSFAV 125 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHSS 216 H S + F TD + + L N D +L+ +D L+ G ++ Sbjct: 126 SHDAASPQFYSFQKDQKQFVMLTDTGYVSEKLRKLLYNADAYLMESNHDVDMLRMGNYAW 185 Query: 217 HF------------SLSESLKKIELI--NPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 H + +L E++ K L H+ D + + T ++ D Sbjct: 186 HLKQRILSDKGHLSNEDGALAMCEMLGDKTKRIYLGHLSQDNNLKELAYQTAESILLQHD 245 >gi|46446103|ref|YP_007468.1| hypothetical protein pc0469 [Candidatus Protochlamydia amoebophila UWE25] gi|46399744|emb|CAF23193.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 259 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 32/177 (18%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S T V++D G + + + IDA+L TH H+DHI G+ + K I Sbjct: 23 SQTKVLIDAGISAKAIQNRLAEINVDISDIDAILITHEHSDHIQGL---KVLAYKLG--I 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V A + K + E+FR C K IE P Sbjct: 78 PVLANHETAKGIVEAFRNCPK-----------------FKIFSTGETFEFKDIEVHPFTI 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 QH I + F + +CTD+ + KLQ D+L ++ + H S Sbjct: 121 QHDTIDPVAFTIRLNDLKLGFCTDLGFATSLVQAKLQGCDYLYLE-SNHQPSMVHAS 176 >gi|312792824|ref|YP_004025747.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179964|gb|ADQ40134.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 265 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 82/239 (34%), Gaps = 55/239 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHIHGIDGL 95 S+ IS +T++IVD G F Q L E++ IDA+L +H H DH+ Sbjct: 18 SILISY-----KDTSIIVDAGVSFKKLAQAL-EKIGFNKKIDAILLSHDHYDHV-----K 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +K + + + + S D +Y +++ + Sbjct: 67 CAGVYFRKLNVPIITNYKTWESIKNSLG-----KVDESYVKLIDT----------GTSFS 111 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G I H +GF F V+ CTDV + D +++++ Sbjct: 112 VGSIGIGTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMIDFSDIILLESNHD 171 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMVL 250 L G + H S ++ K I +N K L H+ + ++ V Sbjct: 172 VEMLMFGPYPYHLKQRIKGDKGHLSNEQAAKMILKLNLARTKRIYLGHLSEENNHPDVA 230 >gi|242005803|ref|XP_002423750.1| zinc phosphodiesterase, putative [Pediculus humanus corporis] gi|212506952|gb|EEB11012.1| zinc phosphodiesterase, putative [Pediculus humanus corporis] Length = 848 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 102/310 (32%), Gaps = 69/310 (22%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K Y LG G+S N+ +S + ++ V++D G Sbjct: 526 KKYPKVLFLGTGSSQ-----------------PNKVRNTSGILVFF---DTDDFVLLDCG 565 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI-----------DGL-----RG 97 + Q++R E + + + +H HADH G+ D Sbjct: 566 EGTFGQLVRFYGLQKAKEILRKLKVIYISHLHADHHMGLITILKERKLAFDEKVESSDSS 625 Query: 98 YFLKQKRPIDVY-AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L+ + VY AP + F F+ + Y I N ++ + K+ Sbjct: 626 ANLENEEFQPVYLLAPIQINRWLTLFDENFEKISG-LYQLIPNKYMMNDKLNNTFYKNCI 684 Query: 157 GVIEAIPIL---QQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI 205 I I H + + G++ Y D P E+L L + D LI Sbjct: 685 KSINLNNIRTTFVDHCPNAFGVAFVHNNGYKI---TYSGDTR--PCEALVTLGMDSDILI 739 Query: 206 IDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST-PSRVV 258 +A + + H + SE+++ + + K +LTH Y + V Sbjct: 740 HEATMDDSLNKLALKKLHSTASEAIEIGKAMKAKYILLTHFSQRYAYVPLFSHLFTDNVG 799 Query: 259 PAFDGMQFSS 268 AFD M S Sbjct: 800 VAFDNMMVSI 809 >gi|153814486|ref|ZP_01967154.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|317500529|ref|ZP_07958751.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331089372|ref|ZP_08338272.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847980|gb|EDK24898.1| hypothetical protein RUMTOR_00699 [Ruminococcus torques ATCC 27756] gi|316898039|gb|EFV20088.1| VicX protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330405435|gb|EGG84970.1| hypothetical protein HMPREF1025_01855 [Lachnospiraceae bacterium 3_1_46FAA] Length = 265 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VDTG + L + +D +L TH H+DHI G+ +K I Sbjct: 20 DDTHLLVDTGISKKRIEEGLKTLELKGEDLDGILITHEHSDHIQGLG-----VFSRKYEI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA P + + +Y + ++ G + P Sbjct: 75 PIYATPGTIMGIK-------------SYSGLGKMPEGLYREIRADEPFELGDMTVKPFAI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 H G+R +VA TD+ + + ++E L+NLD ++++A H H Sbjct: 122 SHDANEPSGYRLEQGGKSVAVATDLGKYDSYTVECLRNLDAVLLEA----NHDIHM 173 >gi|228984270|ref|ZP_04144451.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775387|gb|EEM23772.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 244 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHNGFRLLVDCGSGVLAQIQKYIAPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFNSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|229198271|ref|ZP_04324978.1| Ribonuclease Z [Bacillus cereus m1293] gi|228585150|gb|EEK43261.1| Ribonuclease Z [Bacillus cereus m1293] Length = 307 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 89/300 (29%), Gaps = 91/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRY-----------CFK 127 E F Y Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIIEKDIQGALLVD 162 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L + P +++ +V + Q GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELENGTILNGKDFIGPPQKGRIITI---LGDTRYC--- 216 Query: 188 NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 ----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHIS 272 >gi|296332446|ref|ZP_06874907.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673726|ref|YP_003865398.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150364|gb|EFG91252.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411970|gb|ADM37089.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 244 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 33/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + + +++VD G ++ +DAV+ +H H DHI I L+ + K Sbjct: 25 QSGDYSLLVDCGSAVLSKLFGYVPAEKLDAVILSHYHHDHIADIGPLQFAKQVGSFLGKG 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y ++ TY I + + G Sbjct: 85 EHTLPIYGHDADIE-----------QFQKLTYKTHTKGIAFQPDQ-----PLTAGPFTIT 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H ++ R + V Y D +++ + +N D LI + ++G Sbjct: 129 FLKTIH-PVTCYAMRITDGSHTVVYTAD-SSYQDSFIPFSENADLLISECNFYADQDGTS 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + E+ + + +LTH+ +D + K Sbjct: 187 AGHMNSLEAGRIAKEAGAGELLLTHLPHFGVHDNLRKE 224 >gi|255009339|ref|ZP_05281465.1| putative metallo-beta-lactamase superfamily protein [Bacteroides fragilis 3_1_12] gi|313147094|ref|ZP_07809287.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis 3_1_12] gi|313135861|gb|EFR53221.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides fragilis 3_1_12] Length = 267 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 76/227 (33%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G ++ + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKTLRDINVTMDSIRAVFITHDHADHIKAVGHL-----GEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + +S+ K Y P+ +E+ H Sbjct: 81 TARIHAGINKSYCMTEKLHASVRYLEKEEPMQLED-------------FRIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---- 216 ++G+ ++ TD+ + + +LI++A L+ G + + Sbjct: 128 TDNVGYCIEVDGKVFSFLTDLGEITPTAARYICKAHYLILEANYDEEMLRMGPYPTYLKE 187 Query: 217 -------HF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H ++ + E I + L H+ D ++ + T Sbjct: 188 RISSSTGHMSNVDTADFLAENITEHLRYIWLCHLSKDNNHPELAYKT 234 >gi|149196433|ref|ZP_01873488.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] gi|149140694|gb|EDM29092.1| Beta-lactamase-like protein [Lentisphaera araneosa HTCC2155] Length = 255 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 52/230 (22%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + I+D G F M+ L + + + + TH HADH G+ K Sbjct: 19 ENDTSAYIIDCGLSFKKLCEKMKALGKDLGKLKGIFVTHEHADHASGVRICAD-----KL 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VYA D L + R VI N I + + P Sbjct: 74 DIAVYANHDTALMLKQKNRM-------------GKKCVIFENGQEIFLDG----MCFQPF 116 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H ++++ ++ ++ TD+ + + ++Q + LI++ Sbjct: 117 SVPHDAVNTVAYKVECEGRKISVLTDLGSVTELVVNQVQGSEVLILECNYDQDMLMNCGR 176 Query: 209 -----LKNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVDL-DYDMV 249 + H S ++++ +E + K+ + H+ D DY +V Sbjct: 177 PWRTIQRIMSRHGHLSNEQAMELLERLMHPGLKDLYIGHISEDTNDYALV 226 >gi|32129913|sp|Q9F9U0|PQQB_PSEST RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|9957184|gb|AAG09251.1|AF176640_4 coenzyme PQQ synthesis protein B [Pseudomonas stutzeri] Length = 304 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 91/315 (28%), Gaps = 62/315 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H ILG A G P+ + C R + + S V+ + PD Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCRGVRAGTLRAQPRTQSSIALSDDGGEWVLCNASPDI 60 Query: 65 YMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ +I ++ DH G+ LR Q V+ Sbjct: 61 RAQLEAFPALQPARQLRDTAIAGIVLLDSQIDHCTGLLTLREGCPHQ-----VWCTEMVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI------PILQQH 168 + L F F L + + +IE + P + + G I AI P H Sbjct: 116 QDLTSGFP-LFNML--SHWNGGLQHQLIELDAKPFTIPACPGLSITAIALRSSAPPYSPH 172 Query: 169 GRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G G ++ Y + L ++ D L++D Sbjct: 173 RGNPHPGDNIGLFIEDRRSGRSLFYAPGLGQVEEHLLSWMRRADCLLVDGTLWRDDEMQL 232 Query: 210 -----KNGLHSSHFS------LSESLKKIELINPKNAILTHMHV-----DLDYDMVLKST 253 K G H + E L + + IL H++ DLD + Sbjct: 233 CEVGDKLGSEMGHLCQSGPGGMIEVLDGLPSV---RKILIHINNTNPILDLDSPERAELD 289 Query: 254 PSRVVPAFDGMQFSS 268 + AFDGM Sbjct: 290 ARGIEVAFDGMSIHL 304 >gi|260574251|ref|ZP_05842256.1| beta-lactamase domain protein [Rhodobacter sp. SW2] gi|259023717|gb|EEW27008.1| beta-lactamase domain protein [Rhodobacter sp. SW2] Length = 280 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 83/269 (30%), Gaps = 47/269 (17%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL 95 +S + +++D G ++ V +D + TH H+DH+ + L Sbjct: 21 MPTSTLLEL-----DGRRIVIDCGIGVTKGLVEAGVDLRDLDLICITHLHSDHLLELGPL 75 Query: 96 R--GYFLKQKRPIDVYAAP--DCM-KHLFESFRY-CFKALDDRTYPPIVNPIVIENNDVP 149 + + + VY S Y C + D P+ + + Sbjct: 76 IHTAWCTGLRGAVTVYGPEGIATYWAGFLASMAYDCAIRVLDEGRTPLAELVTVVTYAEG 135 Query: 150 ICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN---VAYCTDVNAFPAESLEKLQNLDFLI 205 + ++ G + + H + RF V D FP + D L+ Sbjct: 136 VVLE---GPLRISALAVPHPPLENCFALRFDGSHTVTLSGDTAYFPPLA-AFAAGSDVLV 191 Query: 206 --------ID----------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 ID AL+ LH++H ++ ++ + +L H+ D Sbjct: 192 HEAMLPEGIDLIVQKTGLGEALRAHLHAAHTTVDDAARVASAAGVGRLVLNHLIPVDDPR 251 Query: 248 MVLKSTPSR--------VVPAFDGMQFSS 268 SR V DG++ + Sbjct: 252 FTAADWLSRCAALWNGPVTLGHDGLEIAL 280 >gi|311896226|dbj|BAJ28634.1| hypothetical protein KSE_28230 [Kitasatospora setae KM-6054] Length = 250 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 88/278 (31%), Gaps = 52/278 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P + SS + ++VD G Sbjct: 1 MKLTVVGC--SGSFPSVDSPC--------------SSYLVEH-----DGYRLVVDLGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAPDCMKH 117 + + + +DA+L +H HADH +D + + R P+ V+ + Sbjct: 40 LGALQKYTGLYEVDAILLSHLHADHC--VDLCAYWVARNYRVEGCPAPLPVHGPAGTAER 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L ++ K V + D+ + A G H + GFR Sbjct: 98 LARAYDMPEKPGMTE---------VFDFRDLSDGARLALGPFTVTAARVNHLDCEAYGFR 148 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIEL 229 ++ Y D P +E + D + +A K S H + +++ + Sbjct: 149 IEAGGRSLVYSGDTGVCPDL-VELARGTDLFLCEAAYTDGKETFDSIHLNGTQAGRHAAA 207 Query: 230 INPKNAILTHM----HVDLDYDMVLKSTPSRVVPAFDG 263 +LTH+ + + + P V A G Sbjct: 208 AGAGRLVLTHIPPWTDPERNRRDAAAAYPGPVELARPG 245 >gi|323484245|ref|ZP_08089613.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323694768|ref|ZP_08108926.1| VicX protein [Clostridium symbiosum WAL-14673] gi|323402397|gb|EGA94727.1| hypothetical protein HMPREF9474_01364 [Clostridium symbiosum WAL-14163] gi|323501205|gb|EGB17109.1| VicX protein [Clostridium symbiosum WAL-14673] Length = 263 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 88/231 (38%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + ++ ++ +D +L TH H+DHI G+ L +K Sbjct: 18 DETHILIDAGISNKRIEKGLNEIGVTGNDLDGILITHEHSDHIKGLG-----VLARKYGT 72 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y+ + ++ + + PI + + G +E P Sbjct: 73 PIYSTKETLEEIGNVKS--LGDYPRELFRPICH-----------DVDFYIGDLEIKPFRI 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + +R N VA TD+ + ++ LQ LD +++++ L+ G + Sbjct: 120 DHDAANPVAYRVQNNRRSVAVATDMGHYSQYIIDHLQGLDAILLESNHDVKMLEAGPYPY 179 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N K+ L H+ + +Y+ + T Sbjct: 180 YLKRRILGDYGHLSNENAGRLLNCILHDNLKHIFLGHLSKENNYEELAYET 230 >gi|297583763|ref|YP_003699543.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297142220|gb|ADH98977.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 246 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 81/242 (33%), Gaps = 44/242 (18%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID-----GLRGYF 99 + E G ++ D G + + +D V+ +H HADH+ + L Sbjct: 22 YLIEEGDTKLIL-DCGSGAVSNLQNHLALKHLDGVIVSHTHADHVADLGVLAYSRLIDMQ 80 Query: 100 LKQ-KRPIDVYA--APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++VYA + + Y YP +E +++ Sbjct: 81 LNHTHHRLNVYAHEDEETLHSELNKDPY------SECYP------FVETDELEFP----- 123 Query: 157 GVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 + +H ++ S G + + Y D + + + + D L+ + Sbjct: 124 -DVTVQFCKGKH-KVDSYGMKIISRETGKKMVYTADTS-YTDQMAAFAKEADLLLAECSF 180 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFD 262 +NG H + ++ + ILTH+ D+ +++ T RV A Sbjct: 181 YQGQNGEQFGHMTSLDAGRLASRGEVGELILTHLPHFGDHAQLIEETRKVYVGRVSLASA 240 Query: 263 GM 264 GM Sbjct: 241 GM 242 >gi|150390810|ref|YP_001320859.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950672|gb|ABR49200.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 245 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 80/250 (32%), Gaps = 53/250 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC P+ G S + ++VD G Sbjct: 1 MKLTVLGC--YGPYPKAGGAC--------------SGYLLE-----DKEIKILVDCGNGV 39 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIH---------GIDGLRGYFLKQKRPIDVYAAPD 113 + + + +DA+ +H H DH+ GI ++G K K+ I +Y Sbjct: 40 LSRFFQHCHDINELDAIFISHLHPDHMSDLMVMKYAIGIGQMQG---KVKQSIPIYLPSS 96 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + ++ +Y V ++ E+ +V I P+ Sbjct: 97 PKED-YDRIQYN---------DAFVRHMIAEDTEVNIKGIKINFKKTNHPVECYGMSFEK 146 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIEL 229 G R + Y D FP + +N D + + ++ H S ++ + Sbjct: 147 NGKR---LVYSGDTKYFPELEV-FAKNCDLFLCEGGILEKDITENTPHLSAKQAAEIALN 202 Query: 230 INPKNAILTH 239 N K +LTH Sbjct: 203 ANLKRVVLTH 212 >gi|313903442|ref|ZP_07836833.1| beta-lactamase domain-containing protein [Thermaerobacter subterraneus DSM 13965] gi|313466263|gb|EFR61786.1| beta-lactamase domain-containing protein [Thermaerobacter subterraneus DSM 13965] Length = 246 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 78/220 (35%), Gaps = 34/220 (15%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHG-------IDGLRGYFLK 101 G V++D GP ++ R + AV Y+H H DH +D R Sbjct: 25 EGPEGPVLLDCGPGVVARLRQRVDPAELAAVFYSHYHPDHSSDHFVLRYVLDIARYLGRP 84 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-- 159 + +P+ +Y + L Y + P +E+ D + AG + Sbjct: 85 RSQPMPLYGPARPPE-LAGRMPY----------KDVFAPHFLESGD---RITVAGWTVAV 130 Query: 160 --EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL-EKLQNLDFLIIDAL----KNG 212 P+ S+ G R + Y D A L E + D L+I+A + Sbjct: 131 RATDHPLPCLASAWSAGGRR---LVYSGDTGPEAAAQLVELARGADVLLIEASLLARRGD 187 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + ++ + + K +LTH+ + D D VL Sbjct: 188 RAPGHLTARQAAEIGQAAGVKRLLLTHLLPEYDPDEVLGE 227 >gi|257869430|ref|ZP_05649083.1| ribonuclease Z [Enterococcus gallinarum EG2] gi|257803594|gb|EEV32416.1| ribonuclease Z [Enterococcus gallinarum EG2] Length = 318 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 87/308 (28%), Gaps = 107/308 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S + + ER N + D G Sbjct: 1 MELEFLGTGA--GVPA--------------KHRNVTSTALRLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 MQ+L + I+ + TH H DHI+G+ GL Q P+++Y + + Sbjct: 43 QMQILHSTIRPRKIEKIFITHLHGDHIYGLPGLISSRSFQGGASPLEIYGPIGIEEFVRT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + +YP + + I E + HG I S G+R Sbjct: 103 VLK---ISQTKLSYPLVFHEITKEG------ILFKDKQFTVSCRRLDHG-IESFGYRVEE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G + D Sbjct: 153 ASHQGELQVEALTALGIKPGPVFGRLKKGEIVTLEDGRQINGSDYVGEAKKGRTVTILGD 212 Query: 192 ----AESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINPK 233 A S+ +N D L+ H S H + ++ + + K Sbjct: 213 TRLCANSILLAENADVLV--------HESTFNKDEAKMARAYFHSTTVQAAEVAKQAQVK 264 Query: 234 NAILTHMH 241 +LTH+ Sbjct: 265 RLLLTHIS 272 >gi|219853328|ref|YP_002467760.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] gi|219547587|gb|ACL18037.1| beta-lactamase domain protein [Methanosphaerula palustris E1-9c] Length = 258 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 45/208 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G + +++VD G + ++ SI+A+L TH H DHI G+D + ++ Sbjct: 18 EGESGSLLVDAGLAAREIQTRLALVGADPGSIEAILVTHEHTDHIRGLD-----VMARRF 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + A + + + + +T I + G P Sbjct: 73 DLPIIATGGTLAEF-----FLHRKVSKKTV------TTITCHP---GTTLEIGDFSIEPF 118 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H G+ + YCTD E +E + D L++++ L++G + Sbjct: 119 SISHDAQDPCGYCIEEKSSRLGYCTDTGVLSGEVIELFRRCDGLVLESNHCPQMLEDGPY 178 Query: 215 SS-----------HFSLSESLKKIELIN 231 + H S ++ ++L+ Sbjct: 179 PAMLKRRIRSRRGHLSNEQASACLQLLG 206 >gi|159906130|ref|YP_001549792.1| ribonuclease Z [Methanococcus maripaludis C6] gi|254808648|sp|A9AB37|RNZ_METM6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|159887623|gb|ABX02560.1| ribonuclease Z [Methanococcus maripaludis C6] Length = 308 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 104/335 (31%), Gaps = 99/335 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R S+ + E + D G + Sbjct: 1 MKLTFLGTGAAI----------------PTKYRAHPSISLKFDGEI-----FLFDCGENT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++ V I+ + +H H DHI G+ GL Q R P+++Y + K L Sbjct: 40 QRQIIFTDVSPMKINNIFISHLHGDHILGLPGLLQSVAFQGRTKPLNIYGPEETAKMLEN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------- 169 + ++D YP +N I + + + + + P++ Sbjct: 100 ILNVGYHSID---YP--INVYEISSKTPEKIISTDNYEVYSFPVVHSVPALAYVFRQVKK 154 Query: 170 ------RISSLGFRFGN--------------------------------VAYCTDVNAFP 191 +++ LG G V Y D P Sbjct: 155 PRMDLEKVNKLGIEIGPDLKRLKDGFSVELNGKIITLEDVTLPPKKGICVGYSGDT--IP 212 Query: 192 AESL-EKLQNLDF--LIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH- 241 E L+ L LI +A + H ++ ++L +L ILTH+ Sbjct: 213 LNEFAEFLRELKCTTLIHEATFDKTMDKNAKETLHSTVHDALNIAKLSGVNTVILTHISA 272 Query: 242 -------VDLDYDMVLKSTPS-RVVPAFDGMQFSS 268 + D P V+ A D M++S Sbjct: 273 RYDELSAFENDIVEFKAENPDLHVLIAEDLMEYSL 307 >gi|307199445|gb|EFN80058.1| Ribonuclease Z, mitochondrial [Harpegnathos saltator] Length = 897 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 106/298 (35%), Gaps = 62/298 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 DY +LG G+S +P + +S + R+ E N ++++D G Sbjct: 589 DYPKILMLGTGSS--IPS---------------KVRNTSGILLRIDE---NNSMLLDCGE 628 Query: 63 DFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---DVYAA 111 + Q+++ + SI A+ +H HADH G+ GL +KQ+R + +Y Sbjct: 629 GTFGQIVKFYGRSEADNIMRSIKAIYVSHLHADHHIGLIGL----MKQRRKVAQDPLYLF 684 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-----AIPILQ 166 + F + I N + + P+ + + Sbjct: 685 APAHIVAWLQFYHKRFEPIFHRITLISNSELFMDVHEPMEYRYKNMYKTVNVRAIRTVYV 744 Query: 167 QHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKL-QNLDFLIIDA------LKNGLH 214 H S G + Y D P E+L KL Q+ D LI +A +K Sbjct: 745 NHCPY-SYGVSIELKDGNKIVYSGDT--MPCENLVKLGQDCDLLIHEATMEDDLVKEAKL 801 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVD------LDYDMVLKSTPSRVVPAFDGMQF 266 H ++S++++ E + K +LTH L V A+D MQ Sbjct: 802 KYHSTVSQAIEMGEQMRSKFTLLTHFSQRYAAIPYLPQSENDSRL-RNVGIAYDNMQV 858 >gi|237713258|ref|ZP_04543739.1| metallo-beta-lactamase hydrolase [Bacteroides sp. D1] gi|262406601|ref|ZP_06083150.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647078|ref|ZP_06724687.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294808115|ref|ZP_06766887.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|298484418|ref|ZP_07002576.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. D22] gi|229446725|gb|EEO52516.1| metallo-beta-lactamase hydrolase [Bacteroides sp. D1] gi|262355304|gb|EEZ04395.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292637575|gb|EFF55984.1| metallo-beta-lactamase domain protein [Bacteroides ovatus SD CC 2a] gi|294444683|gb|EFG13378.1| metallo-beta-lactamase domain protein [Bacteroides xylanisolvens SD CC 1b] gi|298269442|gb|EFI11045.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. D22] Length = 267 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 51/229 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKTLKDYNILMDSIRAVFITHDHADHIKAVG-----NLGEKLNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + P+ ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKQEPMTLE----DFHIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + +LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAAHYISKAHYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S S++ + + E + + L H+ D ++ + T Sbjct: 188 RIASKTGHMSNSDTAEFLAENITEHL--RYIWLCHLSKDNNHPELAYKT 234 >gi|225570711|ref|ZP_03779734.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] gi|225160538|gb|EEG73157.1| hypothetical protein CLOHYLEM_06812 [Clostridium hylemonae DSM 15053] Length = 265 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 89/232 (38%), Gaps = 47/232 (20%) Query: 51 GSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 NT ++VDTG D + L + I+ +L TH H DHI G+ +K Sbjct: 19 DDNTHLLVDTGISKKRIDQGLHTLGIKGEEIEGILITHEHIDHIQGLG-----VFSRKYE 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA ++ + + + P IE +D + G ++ P Sbjct: 74 VPIYATGGTIEGIKCT--------NSIGRMPEGLLHEIEVDD-----EFLLGSLKIQPFA 120 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H G+R VA TD+ + ++E L+ LD ++++A L+ G + Sbjct: 121 ISHDARQPSGYRIEGDNKAVAVATDLGKYDEYTVEHLRELDAVLLEANHDIHMLEVGPYP 180 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + + I N K +L H+ + +Y+ + T Sbjct: 181 YPLKRRVMGEKGHLSNELSGRLLCDILHDNLKYVMLGHLSKENNYEELAYET 232 >gi|284028265|ref|YP_003378196.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283807558|gb|ADB29397.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 247 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 13/201 (6%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG-IDGLRGYFLKQKRPID 107 +G V +D GP ++LR + +DA+ +H H DH+ ++ P+ Sbjct: 26 QGGGAKVWMDAGPGSLAELLRHTSLDQLDAIWVSHLHLDHVGDVLNAYYALAYGLLPPLV 85 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 L + F+ D ++ + + + G ++ + + Sbjct: 86 RPLPVYAPAGLGKRLAGFFEQPDAGFVSNVLELRELRDG-----LTVELGGLQLVSGAVE 140 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 HG + G R +AY D PA E +D L+ +A H + ++ Sbjct: 141 HG-CDAYGLRASAEGRTLAYSGDCEPCPALD-ELAAGVDLLLCEADSGEASGGHHTPEQA 198 Query: 224 LKKIELINPKNAILTHMHVDL 244 + ++TH+ L Sbjct: 199 GAVARRTGVRRLVVTHVGPSL 219 >gi|257899173|ref|ZP_05678826.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|293572078|ref|ZP_06683089.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|257837085|gb|EEV62159.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|291607863|gb|EFF37174.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] Length = 247 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 44/258 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG C P N + + + +++D G Sbjct: 2 MKLTVLG----------------CLGAYPYNNQGTTGYLLQ-----SDGFNLLIDAGSAT 40 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +++ L +DAV+ +H H DHI + L+ Y+ + P+ + ++ Sbjct: 41 LIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR-----DPETLLSIYG--- 92 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----- 178 D + + V + + + G + H + R Sbjct: 93 ---HTKDSVHFEELTMANVSKGHPYFEAEELKIGPFLITFMETIH-PVVCYAMRIVEEAT 148 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKN 234 + D + + + + D + D N H +HF+ E+ + + N K Sbjct: 149 GKVFVFTGD-SGYLESFADFAKEADLFLADTYLFEGNEHHHAHFTSKEAGELAKSANVKK 207 Query: 235 AILTHMHVDLDYDMVLKS 252 +LTH+ D + + Sbjct: 208 LVLTHLPQFGDLEQLKNE 225 >gi|227550421|ref|ZP_03980470.1| metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257897175|ref|ZP_05676828.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|293377817|ref|ZP_06624003.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] gi|227180322|gb|EEI61294.1| metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257833740|gb|EEV60161.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|292643565|gb|EFF61689.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] Length = 247 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 23/213 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +++D G +++ L +DAV+ +H H DHI + L+ Y+ + Sbjct: 26 QSDGFNLLIDAGSATLIKLQEHLDPLDLDAVILSHYHHDHIADLGVLQYYWQLHPKR--- 82 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P+ + ++ D + + V + + + G + H Sbjct: 83 --DPETLLSIYG------HTKDSVHFEELTMANVSKGHPYFEAEELKIGPFLITFMETIH 134 Query: 169 GRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFS 219 + R + D + + + + D + D N H +HF+ Sbjct: 135 -PVVCYAMRIVEEATGKVFVFTGD-SGYLESFADFAKEADLFLADTYLFEGNEHHHAHFT 192 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 E+ + + N K +LTH+ D + + Sbjct: 193 SKEAGELAKSANVKKLVLTHLPQFGDLEQLKNE 225 >gi|225867780|ref|YP_002743728.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701056|emb|CAW97857.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 260 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 + +++D G ++ +E L +DAV+ +H H DH+ + LR Y+ Sbjct: 22 YLVTGHDGFQLLMDAGSRSLNELEKEINPLDLDAVIISHYHPDHVADLGVLRHYYQLYPR 81 Query: 101 KQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +P + +Y + D+ + + P V + + A G Sbjct: 82 HLGKPRLLPIYGHDE----------------DETEFAKLTLPGVSKGIAYQVDGVEALGP 125 Query: 159 IEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + I H + FR + + D F E + D + D Sbjct: 126 FDITFIKTVH-PVVCYAFRIVERATGQVLVFTGDTGYF-EELADFAAEADVFLADVYLYE 183 Query: 213 ---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + K +LTHM Sbjct: 184 GNEHHMAHLTSKEAGQLASRAKVKRLVLTHM 214 >gi|94501029|ref|ZP_01307553.1| Beta-lactamase-like protein [Oceanobacter sp. RED65] gi|94426776|gb|EAT11760.1| Beta-lactamase-like protein [Oceanobacter sp. RED65] Length = 262 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 53/217 (24%) Query: 54 TTVIVDTG---PDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T V++D G +F ++ R+ + +D A+L TH H+DHI G+ L +K I V Sbjct: 22 TRVLIDNGFTLKEFENRLARKGLTPLDLSAILITHEHSDHIKGVGPLA-----RKYRIPV 76 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA+ ++ I + + +++ G ++ P++ H Sbjct: 77 YASHGTAQY--------------HGLGDIPSLRIFDSHG-----DFVIGDLQISPVVVPH 117 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS-- 216 F N + TD+ + LE L+++ L+ G + Sbjct: 118 DAREPTQFVIKNNSAKLGILTDLGSLTPYILEAYAECQALMLETNHDVQMLRAGPYPPKL 177 Query: 217 ---------HFSLSESLKKIELINP---KNAILTHMH 241 H + ++ + + K + TH+ Sbjct: 178 KRRVEGNLGHLNNEQAAWFLSELGCAELKYLVATHIS 214 >gi|298492740|ref|YP_003722917.1| ribonuclease Z ['Nostoc azollae' 0708] gi|298234658|gb|ADI65794.1| ribonuclease Z ['Nostoc azollae' 0708] Length = 315 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + + + TH H DHI G+ GL ID+Y ++L Sbjct: 42 QHQLLRSDLKSSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVDRIDIYGPSGLNEYLQA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + RY + +YP + + + + + H RI++ G+R Sbjct: 102 ASRY---SQTHFSYP--IKVHTVHPGVIYEDNEF------LVSCGLLHHRITAFGYRVE 149 >gi|171056936|ref|YP_001789285.1| pyrroloquinoline quinone biosynthesis protein PqqB [Leptothrix cholodnii SP-6] gi|170774381|gb|ACB32520.1| coenzyme PQQ biosynthesis protein B [Leptothrix cholodnii SP-6] Length = 304 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 104/317 (32%), Gaps = 66/317 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ C RT+SS+ + G + V+V+ Sbjct: 1 MKLLVLGSAAGGGFPQWNCHCDNCRGVRAGAPGLRARTQSSVAV-----GGPHDWVLVNA 55 Query: 61 GPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ R I V+ DH G+ LR + +RP+ ++ Sbjct: 56 SPDVLTQLQRAPALNPGRALRDSGIAGVVLVDGQVDHTTGLYMLR----EGQRPLPLWCT 111 Query: 112 PDCMKHLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + L + F + P ++ E VP +A + Sbjct: 112 DPVFEDLTQGNPILGVLAHFCGVGRHRIP--LDGSSFEVAGVPGLKITALALQSKAAPYS 169 Query: 167 QHGRISS----LGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA-------- 208 H +G F N A Y + A A E + + D +++D Sbjct: 170 PHREQPVPGDNVGLLFENTASGGRLFYAPGLGAIDAPVWELMNSADVVMVDGTFWTDDEM 229 Query: 209 LKNGLHSSHF----SLSES-----LKKIELINPK-NAILTHMHVDLDYDMVLKSTP---- 254 ++ GL L++S ++++ + P +L H++ ++ + +P Sbjct: 230 IRLGLSKKTARDIGHLAQSGEGGMIEQLGRLKPGTRRLLIHINNTNP--ILDEGSPQRRE 287 Query: 255 ---SRVVPAFDGMQFSS 268 + + DG++ Sbjct: 288 LDAAGIEVCHDGIEIEF 304 >gi|229189279|ref|ZP_04316300.1| Beta-lactamase domain protein [Bacillus cereus ATCC 10876] gi|228594179|gb|EEK51977.1| Beta-lactamase domain protein [Bacillus cereus ATCC 10876] Length = 244 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 ++VD G Q+ + IDAV+ +H H DH+ I L+ L Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLIMSGAKGQ 84 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G + Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPLSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|227553626|ref|ZP_03983675.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|227177238|gb|EEI58210.1| conserved hypothetical protein [Enterococcus faecalis HH22] Length = 185 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 67/192 (34%), Gaps = 32/192 (16%) Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 GY L + VY +F + D R + ++ P C A Sbjct: 2 GYALDIPNRLTVYGNEAVKTFYQRAFDLEGRQDDTRLHYQVIQPY--------KCFTIAN 53 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCT--DVNAFPAESLEKLQNLDFLI----I 206 I P+ QHG S F F G A+ + D F +E E L+ L+ + Sbjct: 54 YTIY--PLPAQHGNFSEDCFIFVIDDGKDAFLSTHDTGYFTSEMFEYLEKSHLLLSIVSL 111 Query: 207 DALK--NGLHSSHFSLSESLKKIELINPK-----NAILT--HMHV--DLDYDMVLKSTPS 255 D N +SH + E+LK I + + I H L Y + + Sbjct: 112 DCTSQTNETGNSHMNWEENLKLIAELKERKLVTDKTIYVANHFSHNGGLSYAEMAALSQK 171 Query: 256 R-VVPAFDGMQF 266 ++ ++DG++ Sbjct: 172 HEIITSYDGLEI 183 >gi|163794322|ref|ZP_02188294.1| metallo-beta-lactamase family protein [alpha proteobacterium BAL199] gi|159180490|gb|EDP65011.1| metallo-beta-lactamase family protein [alpha proteobacterium BAL199] Length = 295 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 84/301 (27%), Gaps = 70/301 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G P RR S + +++D GP Sbjct: 1 MKITLLGTGTPA----------------PSLRRQSSGYLFDLGGD-----VIVMDHGPGA 39 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKR-----PIDVYAA---PDC 114 + ++L + D + TH H DHI L P+ V+ + Sbjct: 40 HNRLLEAGYKATDVTHLFLTHYHYDHIMDYPRL-VLTRWDHGADSVPPLRVFGPSPLREL 98 Query: 115 MKHLFESFR------------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L Y + P + + D ++ G Sbjct: 99 TDRLIGEHGAFAWDIAARVKSPASLAVYQARGGGTERPRPAPDLREVSTGD---AVEGCG 155 Query: 157 GVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------- 205 + P ++ +R +V Y D +E D LI Sbjct: 156 WTVTVGPARHVQPHLACQAYRLATDGTSVVYSGDNGGVYEPFIEFASGCDVLIHMNHFLS 215 Query: 206 ---IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 + A + SH ++E+ + +LTH+ LD V + + + +D Sbjct: 216 GTELTADYRRMTGSHLDVAET---ARRAGARMLVLTHLLPQLDQPGVKERMVAEMAAIYD 272 Query: 263 G 263 G Sbjct: 273 G 273 >gi|315646128|ref|ZP_07899248.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315278327|gb|EFU41643.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 245 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 92/251 (36%), Gaps = 36/251 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 +LG G KN ++L + T+++D G Sbjct: 2 TLKLQMLGTG----------------SAFAKNYYNNNALF------HDGDFTLLIDCGIT 39 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL- 118 + L +DA+L TH HADH+ G++ L + +K K R I +Y A ++ + Sbjct: 40 APMALHQLDLTFDDLDALLITHIHADHVGGMEEL-AFIMKMKYNRKIPLYIAEALVEPIW 98 Query: 119 -FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 ++ + + + ++ S+G +E I G+ S + Sbjct: 99 EHSLKGGLYQQGHISSLEDVFDVRPLKPGVK--ADISSGISVELIHTQHIPGKDSYSLYL 156 Query: 178 FGNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 + Y D+ F L KL ++ +F++ + G H +L E L E I + Sbjct: 157 NDRIFYSADMV-FDPALLHKLVNERDCEFILHECQLQGPGEVHTTLDELLSLPEEIQ-ER 214 Query: 235 AILTHMHVDLD 245 L H D++ Sbjct: 215 TYLMHYSDDVE 225 >gi|307693586|ref|ZP_07635823.1| beta-lactamase domain-containing protein [Ruminococcaceae bacterium D16] Length = 274 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 36/188 (19%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D G ++ L S+ VL TH H DHI G+ L ++ Sbjct: 19 SCGQTHILLDAGISARRITTALRGLGVDPASLSGVLITHEHTDHISGL-----ATLTKQL 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + L + R + P G + P Sbjct: 74 GLPVYATAPTLDALAMKVPAIPEKRLGRFFAP--------------GESFPLGELWIEPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S+G+ + CTD+ + + D L+ +A ++ G + Sbjct: 120 ATSHDAACSVGYAITGGDSRMVLCTDLGYISPQVERAVAGCDLLVCEANHDEEWVRTGPY 179 Query: 215 SSHFSLSE 222 + L + Sbjct: 180 P--YCLKQ 185 >gi|291613346|ref|YP_003523503.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291583458|gb|ADE11116.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 83/217 (38%), Gaps = 31/217 (14%) Query: 53 NTTVIVDTGP---DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDV 108 + +++D G D + EQ ++IDAV TH H DH + L +K P+ V Sbjct: 24 DEDILIDAGSGAGDLRL----EQAIAIDAVFLTHSHLDHCAFLPMLADAAGSFRKTPLSV 79 Query: 109 YAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 YA P+ + L + + F D T P I + + + + + Sbjct: 80 YALPETIATLRQ---HMFNNQLWPDYTMLPAPELPYIRFHPIRLGETAELDGRRITALPA 136 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD----FLIIDALKN----GLH 214 H + + +R N Y D F A+ ++L +D LI + +N G Sbjct: 137 SHS-VPCIAYRVDNGTASWVYSADT-TFCADFWQELNRIDNLRYLLIENTFRNDNAAGAQ 194 Query: 215 SSHFSLSESLKKIELI--NPKNAILTHMHVDLDYDMV 249 S + +E L + + P + HM ++ ++ Sbjct: 195 RSGHNTAELLAQGRRLLQRPVELFIVHM--EVGHEQA 229 >gi|311278769|ref|YP_003941000.1| ribonuclease Z [Enterobacter cloacae SCF1] gi|308747964|gb|ADO47716.1| ribonuclease Z [Enterobacter cloacae SCF1] Length = 306 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 92/307 (29%), Gaps = 77/307 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +S+ ++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNMTSILLNLQQPTHA-AMWLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHL 118 Q L+ +D + TH H DH+ G+ GL Q P + +Y + + Sbjct: 42 GTQHQFLKTEHHPGKLDKIFITHLHGDHLFGLPGLLCSRSMQGNPAALTIYGPKGIREFV 101 Query: 119 FESF-------RYCFKALDDRT-----------------YPPIVNPIVIENNDVPICMKS 154 + Y + +P IE +D P + + Sbjct: 102 EMALRLSGSWTDYPLTIEEVSPGLLFDDGRYRVLAYPLNHPVECYGYRIEEHDKPGTLNA 161 Query: 155 AGGV---IEAIPILQ----------QHGRISSLGFRF-------GNVAYCTDVNAFPAES 194 A V I P+ Q GR+ G R+ +A D P Sbjct: 162 AALVADGIRPGPLFQQLKQGLTVTLPDGRL-IDGSRYLGPATPGLKLAIFGDTAPCPQA- 219 Query: 195 LEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 E + +D ++ DA+ + H S ++ + I+TH+ D + Sbjct: 220 FELARGVDVMVHETTLEDAMAEKANGRGHSSTRQTAALAREAGARRLIITHVSSRYDREG 279 Query: 249 VLKSTPS 255 + Sbjct: 280 CRRLLAE 286 >gi|310825780|ref|YP_003958137.1| metallo-beta-lactamase family protein [Eubacterium limosum KIST612] gi|308737514|gb|ADO35174.1| metallo-beta-lactamase family protein [Eubacterium limosum KIST612] Length = 262 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 29/167 (17%) Query: 50 RGSNTTVIVDTG-PDFY-MQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S T +++D G Q L E + +L TH H DHIHG+ L ++ Sbjct: 18 SHSKTKLLIDAGLSGKRIEQALCAVDELPAQLGGILVTHEHRDHIHGVG-----VLSRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + + +S + N V E + G ++ Sbjct: 73 DLPVYANFATWESMRDSLGKIAEH----------NVRVFETGQAFV-----IGDLQIEAF 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 H + S+GF +V TD +E L+ D ++++ Sbjct: 118 NTSHDAVESVGFTIDSGCSSVGIATDTGVITPRIMEALKGRDLVVLE 164 >gi|229016385|ref|ZP_04173328.1| Beta-lactamase domain protein [Bacillus cereus AH1273] gi|229022614|ref|ZP_04179140.1| Beta-lactamase domain protein [Bacillus cereus AH1272] gi|228738705|gb|EEL89175.1| Beta-lactamase domain protein [Bacillus cereus AH1272] gi|228744905|gb|EEL94964.1| Beta-lactamase domain protein [Bacillus cereus AH1273] Length = 244 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 ++VD G Q+ + S IDAV+ +H H DH+ I L+ L Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLIMSGAKGQ 84 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y + D+ + + + + G Sbjct: 85 LPELPIYG----------------HSFDENGFHSLTHAPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|229031788|ref|ZP_04187777.1| Ribonuclease Z [Bacillus cereus AH1271] gi|228729534|gb|EEL80522.1| Ribonuclease Z [Bacillus cereus AH1271] Length = 307 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P+ + G + + I Q+ GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELEDGTLLNGKDFIGPPQK-GRIITI---LGDTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|313125995|ref|YP_004036265.1| metal-dependent hydrolase, beta-lactamase superfamily iii [Halogeometricum borinquense DSM 11551] gi|312292360|gb|ADQ66820.1| metal-dependent hydrolase, beta-lactamase superfamily III [Halogeometricum borinquense DSM 11551] Length = 255 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 90/289 (31%), Gaps = 63/289 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ +P R ++ L + +++VD G Sbjct: 1 MRVTFLGTGSAMPLP----------------DRVQTGLLVE-----SDERSLLVDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFES 121 ++ V I VL TH H DH+ + L ++V K L + Sbjct: 40 LNRLTNTDVGYEGIGTVLLTHHHLDHVSDLLALLKARWLAGETHLEVVGPTGT-KRLLDG 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 L DR V + E + E +H + L +RF Sbjct: 99 LLDVHDYLQDR-----VELRIREVTAGSFEVAG----FEIEATETRHSK-DCLAYRFHGD 148 Query: 179 ----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSES 223 G+ + D AF L D H + L E+ Sbjct: 149 SDAGDDDRSGGDFVFSGDSEAF-EGLANFADGAAVLAHDCSFPDEVDVSNHPTPAQLGEA 207 Query: 224 LKKIELINPKNAILTHM--HVDLDYDMVLKSTPSR----VVPAFDGMQF 266 L ++ LTH+ H + ++ +L+S R V A DG++ Sbjct: 208 LAGYDI---GRVYLTHLYPHTEGKHEEMLQSIGDRYDGDVRFARDGLRI 253 >gi|253573900|ref|ZP_04851242.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846377|gb|EES74383.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 268 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 51/224 (22%) Query: 52 SNTTVIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T+++D G ++ V + +L TH H+DHI G+ + +K + Sbjct: 22 GEVTLMIDAGFSAKRIEELMMERGVSGQDLTGILVTHEHSDHIKGLGAVA-----RKYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + I N + + G + Sbjct: 77 PVYANEKTWAAMEK---------------AIGNLADDQRCILGTGETRDFGSLRVESFAI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H +G+ F ++ CTD+ + E + + D L+++A L+ G + Sbjct: 122 SHDAAEPVGYNFYDGKEKLSVCTDLGYASDKVKEAIYDADVLVLEANHDIEMLRMGRYPW 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH--VDL 244 H S + + + I K L H+ ++ Sbjct: 182 NIKRRILGDLGHLSNDATGELMSEILNGRLKRTYLAHLSREHNM 225 >gi|295095983|emb|CBK85073.1| coenzyme PQQ biosynthesis protein B [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 305 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 97/315 (30%), Gaps = 71/315 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR------RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C ++ RT+SS+ +S + V+ + P Sbjct: 5 VLGSAAGGGFPQWNCNCANCQ--GLRDGTLQATPRTQSSIIVSDNGKEW----VLCNASP 58 Query: 63 DFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + I ++ T DH G+ LR Q V+ P+ Sbjct: 59 DISQQIAHTPELNKKEVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPE 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F F L R + + I A+PI S Sbjct: 114 VHEDLSSGFP-IFTML--RHWNGGLIHHPIAPLTAFSVEACPDLQFTAVPIASNAPPYSP 170 Query: 174 LGFR---FGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 R NVA Y + L L+ D L+ID Sbjct: 171 WRDRPLPGHNVALFIENRRNGQTLFYAPGLGEPDDAILPWLKKADCLLIDGTVWQDDELQ 230 Query: 210 ------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKSTP------ 254 G H +L + + + + K IL H++ ++ + +P Sbjct: 231 ATGVGRNTGRDMGHLALGDEHGMMALLASLPAKRKILIHINNTNP--ILNEQSPQRHALA 288 Query: 255 -SRVVPAFDGMQFSS 268 + ++DGM + Sbjct: 289 QQGIEVSWDGMNITL 303 >gi|149927646|ref|ZP_01915899.1| Coenzyme PQQ biosynthesis protein B [Limnobacter sp. MED105] gi|149823700|gb|EDM82928.1| Coenzyme PQQ biosynthesis protein B [Limnobacter sp. MED105] Length = 310 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 100/319 (31%), Gaps = 68/319 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C K RT+SS+ IS GS ++V+ Sbjct: 1 MKIKVLGSAAGGGFPQWNCNCNNCQAVRAKAPGYTARTQSSIAIS----DGSANWILVNA 56 Query: 61 GPDFYMQV-----LREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L+ D AV+ DH G+ +R + K P+ ++ Sbjct: 57 SPDILTQIKNTPELQPNRGPRDTGIAAVILMDAQIDHTTGLLMMR----EGKTPMRLFTT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPILQQHGR 170 P + L Y + + D P+ + I++IP++ + Sbjct: 113 PAVWEDLTNGLPLV---PTLGFYCGVKWTPLCTECDDPLTISPLDSIKIKSIPLISKAPP 169 Query: 171 ISSLGF---RFGNVA-------------YCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 S + R N+ Y + + L +Q D L++D Sbjct: 170 YSPSRYAQRRGDNIGLLIEDTNTGKKVFYAPGLGEITPDILPFMQAADVLMVDGTFWTED 229 Query: 215 SSH---FSLSESLKK-------------------IELINPKNAILTHMH----VDLDYDM 248 FS + + + IL H++ + ++ Sbjct: 230 EMVTQGFSQKMAADMGHLPQTDKPGKRGSGMISQLRQFETQRKILIHINNTNPILYEHGD 289 Query: 249 VLKSTPSR-VVPAFDGMQF 266 + +FDGM+ Sbjct: 290 ERAILADNGIEVSFDGMEI 308 >gi|109900201|ref|YP_663456.1| beta-lactamase-like [Pseudoalteromonas atlantica T6c] gi|109702482|gb|ABG42402.1| RNAse Z [Pseudoalteromonas atlantica T6c] Length = 312 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 91/271 (33%), Gaps = 53/271 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + +LG G +P R+ S+ I ++T +VD G Sbjct: 32 SEITKVVMLGTGT----------------PHPSPERSGPSVAIIV-----NDTPYLVDFG 70 Query: 62 PDF--YMQVLREQ---------VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDV 108 P + + V ++ TH H+DH G+ L + + P++V Sbjct: 71 PGVVRRAASMSPKFGGPLKGLAVTKLNRAFLTHMHSDHTAGLPDLMLTPWVQGRDTPLEV 130 Query: 109 YAAP---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 Y D K+L +++ K P N I + V + + Sbjct: 131 YGPEGIVDMSKYLLKAYDEDIKYRLYGLQPANNNGWRINAHAVKEGVIYKDENVTVEAFP 190 Query: 166 QQHGRIS-SLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------L 209 +HG + G+RF + + A S++ +N D LI + Sbjct: 191 VKHGSWPDAFGYRFTTPDRIIVISGDKAPDGNSVKYSKNADILIHEVYSDEGKSKLPLFW 250 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +N ++H S E K + N K +L H+ Sbjct: 251 QNYHSNNHTSGVELGKIAQEANVKKLVLYHI 281 >gi|228998930|ref|ZP_04158514.1| Ribonuclease Z [Bacillus mycoides Rock3-17] gi|229006461|ref|ZP_04164115.1| Ribonuclease Z [Bacillus mycoides Rock1-4] gi|228754789|gb|EEM04180.1| Ribonuclease Z [Bacillus mycoides Rock1-4] gi|228760846|gb|EEM09808.1| Ribonuclease Z [Bacillus mycoides Rock3-17] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 91/312 (29%), Gaps = 91/312 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERGE--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + YP ++E + I + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGIVFEDK--QFHVETKRLSHG-IECFGYRIVE 152 Query: 179 ------------------------------------GNVAYCTDVNAFPAE--------- 193 G V + D P + Sbjct: 153 KDIQGHLLVEKLLEAGVKPGPIFKRLKDGEVVELEDGRVLHGKDFIGPPQKGRIITILGD 212 Query: 194 ------SLEKLQNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNAILTHMH 241 S Q+ D L+ +A + H H + ++ N K ILTH+ Sbjct: 213 TRYCEASRILAQDADILVHEATFAAADEIQAHDYFHSTTEQAASIALQANVKRLILTHIS 272 Query: 242 VDLDYDMVLKST 253 D + Sbjct: 273 SRYQADTYKELL 284 >gi|294664822|ref|ZP_06730144.1| metallo-beta-lactamase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605406|gb|EFF48735.1| metallo-beta-lactamase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 335 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 75/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 +VD G Q+ + + + + TH H+DH + + + P+ Sbjct: 84 DGQPYLVDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 143 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F A++ + PP I + D P + Sbjct: 144 LYGPPG-----IARMVEAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTV-LKNDQ 197 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF +V + D PA + E +N D L+ + A Sbjct: 198 VTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALA-EFAKNTDVLVHEVMYLPA 256 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E N K +L H D + Sbjct: 257 LQTMLKTNDNAPTLLDHLLKSHSTSEEVGMIATAANAKMLVLNHFVPGGDASITDAMWSE 316 Query: 256 RVVPAFDG 263 + G Sbjct: 317 GARKHYAG 324 >gi|261417831|ref|YP_003251513.1| ribonuclease Z [Geobacillus sp. Y412MC61] gi|297529499|ref|YP_003670774.1| ribonuclease Z [Geobacillus sp. C56-T3] gi|319767357|ref|YP_004132858.1| ribonuclease Z [Geobacillus sp. Y412MC52] gi|261374288|gb|ACX77031.1| ribonuclease Z [Geobacillus sp. Y412MC61] gi|297252751|gb|ADI26197.1| ribonuclease Z [Geobacillus sp. C56-T3] gi|317112223|gb|ADU94715.1| ribonuclease Z [Geobacillus sp. Y412MC52] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 88/300 (29%), Gaps = 92/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 1 MELLFLGTGA--GVP-----------AKERNV---SSVALQLLDERGA--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DH+ G+ GL G F + P+ V+ + Sbjct: 43 QHQILHTAIRPRRIEHIFITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRAFVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 AL ++E ++ I I HG + S GFR Sbjct: 103 -------ALAVSGTKLRYELNIVEIDEGVIFDDE---RFSVIAKRLDHG-MPSYGFRVVE 151 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 152 KDLPGPLLVERLQALGVRPGPIYQEIKQGKTVVLDDGTVIDGREFVGPPQKGRIVAVLGD 211 Query: 192 ----AESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++E ++ D ++ +A + H + +++ + K ILTH+ Sbjct: 212 TRFCEAAIELARDADVVVHEATFAAAEQRLARDYFHSTTTDAAEVARRAGAKRLILTHIS 271 >gi|9802011|gb|AAF99588.1|AF215894_1 juvenile hormone-inducible protein 1 [Drosophila melanogaster] Length = 789 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 106/297 (35%), Gaps = 62/297 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 479 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 518 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q++R + + A+ +H HADH G+ GL L+++R + A P + Sbjct: 519 GQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGL----LRERRQLKPRADPLILLA 574 Query: 118 LFESFRYC-FKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----- 168 + + F T +V + + + G+ L +H Sbjct: 575 PRQIKPWLEFYNRQIETVEDAYTLVGNGELLASPLSGEQVERLGITSISTCLVRHCPNSF 634 Query: 169 GRISSLGFRFG----NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSH 217 G +L + + Y D P + ++ ++ LI +A +H Sbjct: 635 GISLTLAAKHNSEPVKITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDLEEEARLKTH 692 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSSP 269 ++S+++++ +N ++ ILTH Y PS RV AFD M+ + Sbjct: 693 STVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDNMEVTIE 746 >gi|259047880|ref|ZP_05738281.1| metallo-beta-lactamase superfamily protein VicX [Granulicatella adiacens ATCC 49175] gi|259035557|gb|EEW36812.1| metallo-beta-lactamase superfamily protein VicX [Granulicatella adiacens ATCC 49175] Length = 267 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 76/240 (31%), Gaps = 49/240 (20%) Query: 52 SNTTVIVDTGPD---FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G Q+ + + IDA+L TH H+DHI GI L +K I Sbjct: 25 PKQKLLVDCGLTGKAISAQMEKINRSISDIDAILVTHEHSDHIKGIG-----VLARKYGI 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + I + + G I+ + Sbjct: 80 PIYANEKTWAAMSGK---------------IGKVALEQQEIFNTGETLTFGDIDVMSFAV 124 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH-- 214 H + + F TD + L+N + +LI ++ L+ G + Sbjct: 125 SHDAAAPQFYSFQKDQRQFVMLTDTGYVSDKLRGLLKNANAYLIESNHDLEMLRMGPYAW 184 Query: 215 ---------SSHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 H S + +L E++ K L H+ D + + T V D Sbjct: 185 HLKQRILSDKGHLSNDDGALAMCEMLGDQTKRIYLGHLSQDNNMKEIAYQTAESVFRTHD 244 >gi|229543926|ref|ZP_04432985.1| ribonuclease Z [Bacillus coagulans 36D1] gi|229325065|gb|EEN90741.1| ribonuclease Z [Bacillus coagulans 36D1] Length = 305 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 83/300 (27%), Gaps = 92/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N +S+ + + ER + + D G Sbjct: 1 MEILFLGTGA--GVP-----------AKARNV---TSIALKLLEERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + ++ + TH H DHI G+ G G F P+ VY + Sbjct: 43 QHQILHTAIKPRKVEKIFITHLHGDHIFGLPGFLGSRSFQGGDGPLTVYGPKGIKAFVEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S + + YP +E ++ + HG I S G+R Sbjct: 103 SLK---VSETRLKYP-------LEIIEIEEGTVFEDDRFTVCALRLDHG-IESFGYRITE 151 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 152 KDKPGALDADRLKKEGIRPGPVYRLLKEGRTVTLEDGRVISGKDYLGPAKKGKIIAILGD 211 Query: 192 ----AESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + N D L+ +A + H + +++ + + K +LTH+ Sbjct: 212 TRPNEAEIRLAANADLLVHEATFNKESGQMAHDYFHSTTADAAQTAKQAGAKRLLLTHIS 271 >gi|16799396|ref|NP_469664.1| hypothetical protein lin0319 [Listeria innocua Clip11262] gi|16412748|emb|CAC95552.1| lin0319 [Listeria innocua Clip11262] Length = 276 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 79/281 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + I + + + G ++ H I + Sbjct: 98 KAMDNM---------------IGEVSSEQKFQFDMETVKSFGSMQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD + D +L ++ L+ G + Sbjct: 143 YIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + ++ E+I K L H+ D + + + Sbjct: 203 EGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARM 243 >gi|220910391|ref|YP_002485702.1| ribonuclease Z [Cyanothece sp. PCC 7425] gi|254808626|sp|B8HP81|RNZ_CYAP4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|219867002|gb|ACL47341.1| ribonuclease Z [Cyanothece sp. PCC 7425] Length = 320 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 61/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEV--WLFDCGEAT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR V I + TH H DHI G+ GL +D+Y P K+L Sbjct: 42 QHQILRSDVRLSQIRRIFITHMHGDHIFGLMGLLASCGLAGNVSRMDIYGPPGLNKYLEA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 RY + +YP I + + + + + H R+++ G+R Sbjct: 102 CQRY---SQTHFSYP-----IRVHTVQPGVIYEDEEFTVSCTAL---HHRVTAFGYRV 148 >gi|229010489|ref|ZP_04167691.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] gi|228750687|gb|EEM00511.1| Beta-lactamase domain protein [Bacillus mycoides DSM 2048] Length = 242 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 23 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 82 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 83 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNQEETLQVGPFSIS 126 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 127 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPDF-IPFTKDADLFICECNMYAHQEAAK 184 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 185 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 242 >gi|294812850|ref|ZP_06771493.1| beta-lactamase domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294325449|gb|EFG07092.1| beta-lactamase domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 345 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 74/253 (29%), Gaps = 50/253 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T++GC S P SS + R +++D G Sbjct: 94 SSMKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGN 132 Query: 63 DFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDC 114 ++ R + +DA+ +H HADH ID + + R + VY Sbjct: 133 GALGELQRHIGLYDLDAIFLSHLHADHC--IDMCGYFVARYYRHEGGRCDALPVYGPEGT 190 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L ++ + + + ++ I G H + + Sbjct: 191 EHRLTTAYA---DTPSPTSMSEVFDFRTLKPGTFDI------GPFSVRAERVAH-PVEAY 240 Query: 175 GFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKK 226 G R + +AY D E D + +A K + H + E+ Sbjct: 241 GIRLEHEGRTLAYSGDT-GVCEPLHELADGADLFLCEASFTYGKEDIPDLHLNGREAGAH 299 Query: 227 IELINPKNAILTH 239 E +LTH Sbjct: 300 AERAGAGRLVLTH 312 >gi|325108893|ref|YP_004269961.1| metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Planctomyces brasiliensis DSM 5305] gi|324969161|gb|ADY59939.1| metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Planctomyces brasiliensis DSM 5305] Length = 250 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 83/225 (36%), Gaps = 30/225 (13%) Query: 56 VIVDTGPD-FYMQVLREQVLSID-AVLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAP 112 + D G F L + D + THPH DHI G+ L L+Q +D+Y Sbjct: 29 ICFDAGTSAFR---LPATITRPDLHLFLTHPHWDHIIGLTYLLVPMMLEQITSVDIYGNR 85 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + A ++ P +E+ I +++ + +P++ G Sbjct: 86 RTLDAVKT----LLFAEPTFSHMPAFTFHELEDYPAEITIEAC--RVSWMPLVSHPG--G 137 Query: 173 SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSE 222 S +R + AY TD L + L+ + +++ + H LS+ Sbjct: 138 STAYRVDSDSAHFAYVTDT-YVDGSYNSFLAGTEVLLHECYFGDDMQDWAEKTGHSFLSQ 196 Query: 223 SLKKIELINPKNAILTHMHVDLDYD-----MVLKSTPSRVVPAFD 262 ++ L +LTHM +D D ++ +RV A D Sbjct: 197 TIDLARLTQVNKLLLTHMDPRIDKDDPFDLTAVRQHFNRVEFAHD 241 >gi|86750533|ref|YP_487029.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris HaA2] gi|86573561|gb|ABD08118.1| Coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris HaA2] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 25/175 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C +P RRT++S+ +S S +V+ P Sbjct: 1 MRVVVLGAAAGGGVPQWNCGCAICRAAFADPALRRTQASIAVSADSVHW----FLVNASP 56 Query: 63 DFYMQVLREQVLS----------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D Q++ L I V+ ++ D + G+ +R + P +YA P Sbjct: 57 DLRQQIIATPQLHPATGALRHSPIAGVILSNGEVDAVAGLLSMR-----EGSPFAIYAHP 111 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L + F LD++ P I I+ P+ + E + Sbjct: 112 KVLAILKAN--SIFNVLDEKLVP--RRSIEIDRPFEPMLPDATPSGFEVVAFAVP 162 >gi|227818573|ref|YP_002822544.1| pyrroloquinoline quinone biosynthesis protein PqqB [Sinorhizobium fredii NGR234] gi|36958828|gb|AAQ87253.1| Coenzyme PQQ synthesis protein B [Sinorhizobium fredii NGR234] gi|227337572|gb|ACP21791.1| coenzyme PQQ synthesis protein B [Sinorhizobium fredii NGR234] Length = 303 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 92/315 (29%), Gaps = 63/315 (20%) Query: 1 MKDY--YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR----SSLKISRVSERGSNT 54 MK+ +LG A G+P+ C R SSL +S E + Sbjct: 1 MKNASDLRVVVLGAAAGGGLPQWNCGCRNCAAAREPGSSLRPQTQSSLAVSLDGEAWAIF 60 Query: 55 TVIVDTGPDFYMQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 PD Q+ R + I AV+ T+ DH+ G+ L++K+P Sbjct: 61 N----ASPDIRQQIQVNAALQPHRLRHSPIKAVVLTNGDIDHLAGL-----LVLREKQPF 111 Query: 107 DVYAAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 V++ + + ++ F L ++ I P G +P+ Sbjct: 112 TVFSTGAVAEVIADNPVFGVLDPGLVSKSVVAIEEPFSPLPGLEARLFAVPGK----VPL 167 Query: 165 LQQHGRISSLGFRFG------------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 + G LG V Y A + +L+ D L D Sbjct: 168 FLEDGD-PELGLEGEQTVGLELRADGKRVYYIPGCGALSGSLVARLEGADALFFDGTLFS 226 Query: 210 -----------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKS--- 252 K G H + SLK + + I H++ Sbjct: 227 DDEMIAAGVGQKTGRRMGHMPIAGEDGSLKALGPLKIPRKIYVHINNTNPIWQAGPEREC 286 Query: 253 -TPSRVVPAFDGMQF 266 FDGM+ Sbjct: 287 AEAHGFEVGFDGMEV 301 >gi|52141354|ref|YP_085475.1| ribonuclease Z [Bacillus cereus E33L] gi|76363372|sp|Q635E2|RNZ_BACCZ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|51974823|gb|AAU16373.1| possible metallo-beta-lactamase [Bacillus cereus E33L] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 91/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIIEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P+ + G + + I Q+ I+ LG + YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELENGTILNGKDFIGPPQKGRVITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|182417034|ref|ZP_02948413.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237669633|ref|ZP_04529611.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379131|gb|EDT76634.1| metallo-beta-lactamase family protein [Clostridium butyricum 5521] gi|237654867|gb|EEP52429.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 263 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 81/240 (33%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G D ++ + E+ +ID + TH H+DHI G+ + +K I Sbjct: 20 DRAKILIDAGLPGKKIDEALKAIDEETKNIDGIFITHEHSDHIKGVG-----VISRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA D + S + I+ D + G + Sbjct: 75 PIYANADTWSAMEGSLG-------------KIKEHNIKVIDKRSVTE--IGDLNIKAFNI 119 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H +G+ N++ TD F E + +++ + +++ + LK G + Sbjct: 120 PHDAAGPMGYTVSDGKKNISVATDFGTFTREIYDNVKDSEVILLESNHDVNMLKFGPYPY 179 Query: 216 ----------SHFSLSESLKKIELI----NPKNAILTHMHV-----DLDYDMVLKSTPSR 256 H S + I + N K IL H+ DL Y VL Sbjct: 180 QLKRRILSEIGHLSNDDCGNAIVELVKCGNNKKIILGHLSNTNNQPDLAYATVLDVLNDN 239 >gi|254417354|ref|ZP_05031097.1| metallo-beta-lactamase superfamily, putative [Microcoleus chthonoplastes PCC 7420] gi|196175892|gb|EDX70913.1| metallo-beta-lactamase superfamily, putative [Microcoleus chthonoplastes PCC 7420] Length = 301 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 34/228 (14%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V R +I D G + Q + Q+ + +TH H DHI G F+K Sbjct: 35 CVEMRVGRERLIFDGGTGLRVLGQSMLSQMPVEAHLFFTHSHWDHIQGFPFFVPAFIKS- 93 Query: 104 RPIDVYA----APDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y +K L + + P V ++ D+ + G Sbjct: 94 NRFRIYGAIAPNGSTIKQRLTDQM-----LHPNFPVPLQVMQADLQFYDLEVGESVELGE 148 Query: 159 IEAIPILQQHGRISSLGFRFGN----VAYCTDV----NAFPAESLEKLQNLDFLIIDAL- 209 I L H ++G+R AY TD + L+ +Q++D LI DA Sbjct: 149 ITVENTLLNHPG-EAVGYRVNWRGHAAAYITDTEHRPSGLDENILKLIQDVDVLIYDATY 207 Query: 210 ----KNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 +S H + E +K + N K ++ H D ++ Sbjct: 208 TDTEYYSPATSKVGWGHSTWQEGIKLAKAANVKTLVI--FHHDPLHND 253 >gi|150402080|ref|YP_001329374.1| ribonuclease Z [Methanococcus maripaludis C7] gi|166991485|sp|A6VFJ7|RNZ_METM7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150033110|gb|ABR65223.1| ribonuclease Z [Methanococcus maripaludis C7] Length = 310 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 106/335 (31%), Gaps = 99/335 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R S+ + E + D G + Sbjct: 1 MKLTFLGTGAAI----------------PTKYRAHPSISLKFDGEI-----FLFDCGENT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q++ V I+ + +H H DHI GI GL F + +P+++Y + K + Sbjct: 40 QRQIIFTDVSPMKINNIFISHLHGDHILGIPGLMQSIAFQGRTKPLNIYGPKETAKMIEN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------- 169 + ++D YP +N I + S + + P++ Sbjct: 100 ILNVGYHSID---YP--INVYEISAKSPEKIISSDNYEVFSFPVVHSVPALAYVFKQVKK 154 Query: 170 ------RISSLGFRFGN--------------------------------VAYCTDVNAFP 191 +++ LG G V Y D P Sbjct: 155 PRMDLEKVNKLGIEIGPDLKRLKDGFNIELNGKIITPDDVTVPPKKGICVGYSGDT--IP 212 Query: 192 AESL-EKLQNLDF--LIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV 242 E L+ L LI +A + H ++S++L +L ILTH+ Sbjct: 213 LNEFAEFLKELKCTTLIHEATFDKSMDKNAKETLHSTVSDALNIAKLSGVNTVILTHISA 272 Query: 243 DLD----YD----MVLKSTPS-RVVPAFDGMQFSS 268 D Y+ P ++ A D M++S Sbjct: 273 RYDEISAYEKDIVEFKAEHPDLHILIAEDLMEYSL 307 >gi|186685324|ref|YP_001868520.1| ribonuclease Z [Nostoc punctiforme PCC 73102] gi|254808652|sp|B2J3C7|RNZ_NOSP7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|186467776|gb|ACC83577.1| ribonuclease Z [Nostoc punctiforme PCC 73102] Length = 319 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 62/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++R ++ + + TH H DHI G+ GL ID+Y P ++ Sbjct: 42 QHQIMRSELKISQLSRIFITHMHGDHIFGLMGLLATCGLAGNVERIDIYGPPGLNDYIQS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + RY + +YP V+ I + G + H RI++ G+R Sbjct: 102 ASRYSYTHF---SYPIKVHAIRPGVIYEDDYFTVSCGNL--------HHRITAFGYRV 148 >gi|17547214|ref|NP_520616.1| hydrolase protein [Ralstonia solanacearum GMI1000] gi|17429516|emb|CAD16202.1| probable arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein [Ralstonia solanacearum GMI1000] Length = 320 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 83/265 (31%), Gaps = 53/265 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 43 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 82 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 Q + + +I V TH H+DH G L + P+D + P + + Sbjct: 83 RQYVSAGLTLKAIRHVFITHQHSDHNADYGALMLLAWGTDLAGPVDAWGPPP-LAAMTAR 141 Query: 122 F----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGF 176 F Y + P + P++ + + ++ L +H + + + Sbjct: 142 FLELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAY 201 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLH 214 RF ++ D + D L+ +D L+ L Sbjct: 202 RFDAADRSIVISGDTAP-SENLVRLAHGADVLVHEVMHLPSLDKLLSTEPNAKTLREHLL 260 Query: 215 SSHFSLSESLKKIELINPKNAILTH 239 +SH S + + K +L+H Sbjct: 261 ASHTSAEDVGRIATEAKVKTLVLSH 285 >gi|49478558|ref|YP_038206.1| ribonuclease Z [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118479338|ref|YP_896489.1| ribonuclease Z [Bacillus thuringiensis str. Al Hakam] gi|196038730|ref|ZP_03106038.1| ribonuclease Z [Bacillus cereus NVH0597-99] gi|196047233|ref|ZP_03114449.1| ribonuclease Z [Bacillus cereus 03BB108] gi|225866126|ref|YP_002751504.1| ribonuclease Z [Bacillus cereus 03BB102] gi|228916781|ref|ZP_04080346.1| Ribonuclease Z [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229093204|ref|ZP_04224322.1| Ribonuclease Z [Bacillus cereus Rock3-42] gi|229186388|ref|ZP_04313552.1| Ribonuclease Z [Bacillus cereus BGSC 6E1] gi|301055637|ref|YP_003793848.1| ribonuclease Z [Bacillus anthracis CI] gi|56749430|sp|Q6HE20|RNZ_BACHK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991094|sp|A0RID9|RNZ_BACAH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808609|sp|C1ER14|RNZ_BACC3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|49330114|gb|AAT60760.1| possible metallo-beta-lactamase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|118418563|gb|ABK86982.1| RNAse Z [Bacillus thuringiensis str. Al Hakam] gi|196021982|gb|EDX60673.1| ribonuclease Z [Bacillus cereus 03BB108] gi|196030453|gb|EDX69052.1| ribonuclease Z [Bacillus cereus NVH0597-99] gi|225787461|gb|ACO27678.1| ribonuclease Z [Bacillus cereus 03BB102] gi|228597015|gb|EEK54671.1| Ribonuclease Z [Bacillus cereus BGSC 6E1] gi|228690178|gb|EEL43972.1| Ribonuclease Z [Bacillus cereus Rock3-42] gi|228842968|gb|EEM88051.1| Ribonuclease Z [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300377806|gb|ADK06710.1| ribonuclease Z [Bacillus cereus biovar anthracis str. CI] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 91/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF- 119 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 120 -----------------------------------------ESFRYCFKALDDRTYPPIV 138 E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRIIEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P+ + G + + I Q+ I+ LG + YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELENGTILNGNDFIGPPQKGRVITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|94971352|ref|YP_593400.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94553402|gb|ABF43326.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 265 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 46/226 (20%) Query: 56 VIVDTGPDFYMQVLREQVL-----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G ++R + S+ A+L TH H+DHI G++ L +K I V+ Sbjct: 24 LLVDAGLSCKETLIRLRASGCDQTSLSAILITHEHSDHIAGLN-----VLAKKLRIPVFI 78 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + G I P H Sbjct: 79 TASTQRAYLRM----------ARDSQGNKVRLERVENFEAGRSFQIGDIAITPFTIPHDA 128 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 +GF F A TD+ P + ++ L++++ L+ G + Sbjct: 129 ADPVGFTFRAEGIKAAIATDLGYMPVSVKDHIRGCQMLVVESNHDVEMLRIGPYPWSVKQ 188 Query: 216 ------SHFSLSESLK--KIELI--NPKNAILTHMHVDLDYDMVLK 251 H S +++L + + IL H+ ++ V + Sbjct: 189 RVMSRVGHLS-NDALADFIVNDYDGGAEYLILAHLSEQNNHPEVAR 233 >gi|56420868|ref|YP_148186.1| ribonuclease Z [Geobacillus kaustophilus HTA426] gi|76363377|sp|Q5KXG8|RNZ_GEOKA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|56380710|dbj|BAD76618.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 307 Score = 69.4 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 95/290 (32%), Gaps = 72/290 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N SS+ + + ERG+ T + D G Sbjct: 1 MELLFLGTGA--GVP-----------AKERNV---SSVALQLLGERGA--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA-------PD 113 Q+L + I+ + TH H DH+ G+ GL G F + P+ V+ Sbjct: 43 QHQILHTAIRPRRIEHIFITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRSFVET 102 Query: 114 CMKHLFESFRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 + RY ++ D + + M S G + + +P R Sbjct: 103 ALAVSGTKLRYELNIVEIDEGVIFDDERFSVIAKRLDHGMPSYGFRVVEKDLPGPLLVER 162 Query: 171 ISSLGFRFGNV---------------------------------AYCTDVNAFPAESLEK 197 + +LG R G + A D F ++E Sbjct: 163 LQALGVRPGPIYQEIKQGKTVVLDDGTVIDGREFVGPPQKGRIVAVLGDT-RFCEAAIEL 221 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A + H + +++ + K ILTH+ Sbjct: 222 ARDADVVVHEATFAAAEQRLAHDYFHSTTTDAAEVARRAGAKRLILTHIS 271 >gi|116871685|ref|YP_848466.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740563|emb|CAK19683.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 276 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 79/281 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ I ++ ++VD G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLIETGDQK-----ILVDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-NMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + I + + + G ++ H I + Sbjct: 98 KAMDNM---------------IGEVSSDQKFQFDMETVKSFGSMQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD + D +L ++ L+ G + Sbjct: 143 YIFHNGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + ++ E+I K L H+ D + + + Sbjct: 203 EGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARM 243 >gi|297194137|ref|ZP_06911535.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721963|gb|EDY65871.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 250 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 76/252 (30%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R PI V+ + Sbjct: 40 LGELQRHCGLYDLDAIFLSHLHADHC--IDMCGYFVARYYRHDGGRCAPIPVHGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ I G H + + G Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTLKPGHFEI------GPFSVFTEKLAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D + D + +A K + H + E+ Sbjct: 148 RLEHGGRTLTYSGDT-GVCDALDDLAAGADLFLCEASFTHGKEDIPDLHLNGREAGAYAR 206 Query: 229 LINPKNAILTHM 240 N +LTH+ Sbjct: 207 RANAGRLVLTHI 218 >gi|262199496|ref|YP_003270705.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262082843|gb|ACY18812.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 284 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 27/181 (14%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP-- 136 +L +H H DHI G +F++ I + A L E ++ + Y P Sbjct: 68 ILLSHTHLDHIQGFPFFTPFFVR-GNKIRIIGAEPTDATLVE----ILQSKLNPHYSPLY 122 Query: 137 ----IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDV- 187 + + +E+ + + G + + HG IS+L +R +V Y +DV Sbjct: 123 GLENLAAGVSVESVEPGQHIDITGFDVRCAAVP--HGNISTLAYRIEADGVSVVYMSDVE 180 Query: 188 --NAFP-AESLEKLQNLDFLIIDAL----KNGLHS--SHFSLSESLKKIELINPKNAILT 238 + P ++E ++ D LI DA+ + H H S+S ++ E L Sbjct: 181 HPDGVPYGPAVELARSADLLIHDAMFSDEQYPHHRGGGHSSVSMAIATAERAEVGRLALY 240 Query: 239 H 239 H Sbjct: 241 H 241 >gi|228990187|ref|ZP_04150157.1| Beta-lactamase domain protein [Bacillus pseudomycoides DSM 12442] gi|228769550|gb|EEM18143.1| Beta-lactamase domain protein [Bacillus pseudomycoides DSM 12442] Length = 244 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAVL +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVLLSHYHHDHVADIGVLQYARLITSMAKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D + + + + + G Sbjct: 85 LPELPIYG----------------HGFDVQGFSSLTHAPHTKGIVYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H I R + Y D + P + ++ D I + + Sbjct: 129 FLKTVHPVI-CYAMRITVGDKVIVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + +++ R+ A G ++S Sbjct: 187 AGHMNSTEVADIAKNANVKELLLTHLPHTGNISDLVEEAKQIFDGRITLAHSGYVWNS 244 >gi|320547593|ref|ZP_08041878.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] gi|320447668|gb|EFW88426.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] Length = 258 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DHI + LR YF Sbjct: 21 SYLVTSEDGFQLLMDCGSRAVTELEKEISPLDLDAVIISHYHPDHIADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + +Y + D+ + + P V E + G Sbjct: 81 KHLWTPKVLPIYGHKE----------------DEVEFAKLTLPGVSEGRVYDVNGVEHIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + D + D Sbjct: 125 PFDITFIKTVH-PVPCYAFRIVERATGQTLVFTGDTGYFDGLE-KFAAGADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTH 239 H +H + E+ + + K+ +LTH Sbjct: 183 AGNENHPAHLTTKEAGQIAKAAGVKSLVLTH 213 >gi|110669277|ref|YP_659088.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] gi|109627024|emb|CAJ53500.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] Length = 318 Score = 69.4 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 99/328 (30%), Gaps = 96/328 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++ P R S+ + R ER ++ D G Sbjct: 1 MRATFLGTGGAV----------------PTTERGPSAFFVERDGER-----LLFDCGEGT 39 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 Q++R S+ + TH H DHI GI GL F + + ++ P HL Sbjct: 40 QRQMMRFGTGFSLSHIFVTHLHGDHILGIPGLIQTLDFNDRTDALAIHGPPGSKPHLRH- 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----- 176 ++ Y P + E + + + +I + H ++S+G+ Sbjct: 99 ------LVETAGYRPGYPINIREIRPGSVAVDTEEYIIRS--FETSHRGVTSIGYALIES 150 Query: 177 --------------------RFG-----------------------------NVAYCTDV 187 +FG V Y D Sbjct: 151 DRKGRFNRDRAESLGVPVGPKFGRLHDGESVKLADGSIVHPEQVVGDSRPGRRVVYTGDT 210 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 ++E N D L+ DA +S H + E+ + + + LTH+ Sbjct: 211 RP-TETTVEAANNADLLVHDATFAADRASRAKQTGHSTAQEAAQIATRADARQLALTHVS 269 Query: 242 VDLDYDMVLKSTPSRVVPAFDGMQFSSP 269 Y + S AFDG + P Sbjct: 270 SR--YAGDVTPLESDATAAFDGQRAFVP 295 >gi|312876088|ref|ZP_07736076.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797074|gb|EFR13415.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 265 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 81/239 (33%), Gaps = 55/239 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHIHGIDGL 95 S+ IS +T++IVD G F Q L E++ IDA+L +H H DH+ Sbjct: 18 SILISY-----KDTSIIVDAGVSFKKLAQAL-EKIGFNKKIDAILLSHDHYDHV-----K 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +K + + + + S D +Y +++ + Sbjct: 67 CAGVYFRKLNVPIITNYKTWESIKNSLG-----KVDESYVKLIDT----------GTSFS 111 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G I H +GF F V+ CTDV + D +++++ Sbjct: 112 VGSIGIDTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMIDFSDIILLESNHD 171 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMVL 250 L G + H S ++ K I +N K L H+ ++ V Sbjct: 172 VEMLMFGPYPYHLKQRIKGDKGHLSNEQAAKMILKLNLARTKRIYLGHLSEKNNHPDVA 230 >gi|118476689|ref|YP_893840.1| metal-dependant hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118415914|gb|ABK84333.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 244 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|229166028|ref|ZP_04293792.1| Beta-lactamase domain protein [Bacillus cereus AH621] gi|228617439|gb|EEK74500.1| Beta-lactamase domain protein [Bacillus cereus AH621] Length = 242 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 ++VD G Q+ + IDAV+ +H H DH+ I L+ L Sbjct: 23 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLIMSGAKGQ 82 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 83 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSIS 126 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 127 FLKTVH-PVTCFAMRITAGDDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 184 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 185 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYIWNS 242 >gi|328957067|ref|YP_004374453.1| putative metal-dependent hydrolase [Carnobacterium sp. 17-4] gi|328673391|gb|AEB29437.1| putative metal-dependent hydrolase [Carnobacterium sp. 17-4] Length = 248 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 55/245 (22%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG 91 P N SS + N +++D G + + L +DAV+ +H H DHI Sbjct: 13 PTNNSGTSSYLLEA-----ENYHLLIDAGSASLIALENHLDPLQLDAVILSHYHYDHIAD 67 Query: 92 IDGLRGYFLKQKR---------PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 + + + + KR + +Y A D + + +V Sbjct: 68 LG-VLQFTRQLKRMKNDLERAPMLPIYG----------------HAGDKENFKRLTMDLV 110 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV------------AYCTDVNAF 190 E + K G E + H + R + Y +D +F Sbjct: 111 SEGIEYEENEKIYIGPFEIHFMKTLH-PVECYAMRIMEIKTGKTLIYTADSGYLSDFISF 169 Query: 191 PAESLEKLQNLDFLIIDALKN---GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 ++ D L+ D H H + SE K + + K ILTH+ + D Sbjct: 170 S-------KDADVLLADTNFFNGMENHRVHMTASEVGKIAKEAHVKKVILTHLPQEGDLQ 222 Query: 248 MVLKS 252 ++ Sbjct: 223 LLKAQ 227 >gi|195582146|ref|XP_002080889.1| GD25997 [Drosophila simulans] gi|194192898|gb|EDX06474.1| GD25997 [Drosophila simulans] Length = 743 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 62/297 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 433 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 472 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q++R + + A+ +H HADH G+ GL L+++R ++ A P + Sbjct: 473 GQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGL----LRERRQLEPRADPLILLA 528 Query: 118 LFESFRYC-FKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----- 168 + + F T +V + + + G+ L +H Sbjct: 529 PRQIEPWLEFYNRQIETVEDAYTLVGNGELLASPLSGEQVEPLGITSISTCLVRHCPNSF 588 Query: 169 GRISSLGFRFG----NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSH 217 G +L + + Y D P + ++ ++ LI +A +H Sbjct: 589 GISLTLAAKHNSEPIKITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDLEEEARLKTH 646 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSSP 269 ++S+++++ +N ++ ILTH Y PS RV AFD M+ + Sbjct: 647 STVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDNMEVTIE 700 >gi|49477083|ref|YP_035339.1| metal-dependant hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328639|gb|AAT59285.1| conserved hypothetical protein, metal-dependant hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 244 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGNDAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVTELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|71042373|pdb|1ZKP|A Chain A, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042374|pdb|1ZKP|B Chain B, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042375|pdb|1ZKP|C Chain C, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease gi|71042376|pdb|1ZKP|D Chain D, 1.5a Resolution Crystal Structure Of A Metallo Beta Lactamase Family Protein, The Elac Homolgue Of Bacillus Anthracis, A Putative Ribonuclease Length = 268 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 49 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 108 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 109 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSIS 152 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R GN V Y D + P + ++ D I + + Sbjct: 153 FLKTVH-PVTCFAXRITAGNDIVVYSADSSYIPEF-IPFTKDADLFICECNXYAHQEAAK 210 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 211 AGHXNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWNS 268 >gi|158317398|ref|YP_001509906.1| beta-lactamase domain-containing protein [Frankia sp. EAN1pec] gi|158112803|gb|ABW15000.1| beta-lactamase domain protein [Frankia sp. EAN1pec] Length = 248 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 52/252 (20%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGC G G P SS I +++D G Sbjct: 1 MKLTILGCSGTYPG-PASAC----------------SSYLIE-----DEGFRLVLDAGNG 38 Query: 64 FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMK 116 ++ R + +DAVL +H H DH +D + + ++ P + VY + + Sbjct: 39 SMGELQRHCDIRDVDAVLLSHLHGDHC--LDLVATSYARRYHPEGMPPKLPVYGPINTQE 96 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L F+ D + I + I + G H I + G Sbjct: 97 RLCG----AFERWPDDSLADIYDFRTIGPG------RLHVGPFAIDLARVAH-PIEAYGV 145 Query: 177 RF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + Y D + + D + +A ++ H + ++ + Sbjct: 146 RVTAGGKTLTYSGDT-GVCDRLVRLAHDSDLFLCEASFLDGEDNPPDLHLTGKDAGEHAT 204 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 205 RAGVGRLVLTHL 216 >gi|317130060|ref|YP_004096342.1| hypothetical protein Bcell_3369 [Bacillus cellulosilyticus DSM 2522] gi|315475008|gb|ADU31611.1| hypothetical protein Bcell_3369 [Bacillus cellulosilyticus DSM 2522] Length = 240 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 72/234 (30%), Gaps = 33/234 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------ 102 V++D G V + + + A++ +H H DH+ + + Q Sbjct: 25 EADEYNVLIDCGSGVISNVQKFCNLNDLKAIILSHYHHDHMA---DIGVFHYSQILTQSK 81 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ I +Y + + + D V+ I Sbjct: 82 EKKI-IYGHTEDEEKFQK-----LHFQDLVVAKAFSEKHVLTLGPFNINFHK-----TVH 130 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS----SHF 218 P RI G + Y D + + E + +N D LI + + H Sbjct: 131 PASCYAMRIERNGKI---MTYTADTS-YQEELADFAKNSDVLIAECSAYEENDVSQFGHM 186 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + ++ + + K +L+H+ D+ + ++ A G+ S Sbjct: 187 NSRDAGRLAQKAGVKQLLLSHLPHHGDHQQLKNEASKYFDGEILIASSGLSISL 240 >gi|270340091|ref|ZP_06007020.2| metallo-beta-lactamase superfamily protein [Prevotella bergensis DSM 17361] gi|270332712|gb|EFA43498.1| metallo-beta-lactamase superfamily protein [Prevotella bergensis DSM 17361] Length = 256 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 46/230 (20%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G + ++++ TH HADH+ + L F + Sbjct: 4 ENYGLLIDAGVGIRTLKKHFKDYNIQLSKANSLIITHDHADHVKSVGSLSKEF-----NL 58 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY+ + + +C + + P I+ D + + P Sbjct: 59 PVYSTQKVHAGIDNN--WCVRCK--------IMPERIKFIDKNTQFQLS--DFTITPFDI 106 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H ++G+ TDV E E + ++L+I+A L G + + Sbjct: 107 PHDSTDNVGYCIQYQNITFVLMTDVGHLTDEIKEYIGKANYLVIEADYESEMLDRGSYPT 166 Query: 217 HF------------SLSESLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H ++ + E K + L H+ + ++ + + Sbjct: 167 HLKKRIRGPYGHMSNVECATAIAENATSKLQHVWLCHLSDENNHPELAEK 216 >gi|310765261|gb|ADP10211.1| pyrroloquinoline quinone biosynthesis protein PqqB [Erwinia sp. Ejp617] Length = 303 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 92/317 (29%), Gaps = 67/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIV 58 +LG A G P+ C +N RT+SS+ +S V+ Sbjct: 1 MKIKVLGSAAGGGFPQWNCYCRNCQ--GVRNGSISATARTQSSIAVSDNGRDW----VLC 54 Query: 59 DTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + PD Q+ L I +++ T DH G+ LR Q V+ Sbjct: 55 NASPDICHQIAANPELHQPGALRGSAIGSIILTDSQIDHCTGLLNLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P+ L F F L + + I+ AIPIL Sbjct: 110 CTPEVHADLTSGFP-IFTMLQH--WNGGLAHHAIQPAQPFSVAVCPALRFTAIPILSNAP 166 Query: 170 RISSLGFR----------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 S R + Y + A L+ + D L+ID Sbjct: 167 PYSPFRGRPLPGHNIALMIEDTSSGSKLLYAPGLGEPDAPLLDLMSQADCLLIDGTLWQD 226 Query: 210 ----------KNGLHSSHFSLSE---SLKKIELINPKNAILTHMHVD---LDYDMVLK-- 251 G H +L E + + + IL H++ LD + Sbjct: 227 NELANTGVGRNTGRDMGHLALGEDRGLMALLNDLPAPRKILIHINNTNPILDESSAERLS 286 Query: 252 STPSRVVPAFDGMQFSS 268 T + ++DGM Sbjct: 287 LTARGIEVSYDGMSIEL 303 >gi|310779488|ref|YP_003967821.1| metal dependent hydrolase [Ilyobacter polytropus DSM 2926] gi|309748811|gb|ADO83473.1| metal dependent hydrolase [Ilyobacter polytropus DSM 2926] Length = 258 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G ++++ E + + A+L TH H DHI G L +K I Sbjct: 20 DGFKFLVDAGFSGKKIKEKLELIGENIEELGALLITHEHLDHILG-----AGVLSRKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + K E ++ + D + + ++ P Sbjct: 75 PIYITGESYKVCAEKLG-------------KISENNLRLVDGDFRLMES---VKVTPFDV 118 Query: 167 QHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA------------- 208 H ++GF+ N +A TD+ E ++++ ++I+ Sbjct: 119 MHDAERTIGFKIENSRGKKLAISTDIGYINNIVREHFKDVNIVVIECNYDYQMLMSCSYP 178 Query: 209 ----LKNGLHSSHFSLSESLKKIELIN-P--KNAILTHMHVD 243 + + H S +++ K I IN P + L H+ D Sbjct: 179 WDLKARVKGRNGHLSNTDAAKFIGDINHPGLEKVYLAHVSRD 220 >gi|291562817|emb|CBL41633.1| RNAse Z [butyrate-producing bacterium SS3/4] Length = 303 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 98/323 (30%), Gaps = 85/323 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G +P R +S+ R + +++D G Sbjct: 2 LDICLLGTGGMQPLP----------------YRWLTSMM-----ARCDGSNLLIDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPD 113 + L+E+ +D + +TH HADHI G+ G+ L + Sbjct: 41 QI-ALKEKGWSPKPVDVICFTHYHADHISGLP---GFLLTMGNAERTEPVLLVGPKGLER 96 Query: 114 CMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA------- 161 + L F FK L + P V++ V + G I Sbjct: 97 VVGALRTIAPELPFPLVFKELTEPREKFQAGPYVVDAFRVNHRVTCYGYRITIPRNGKFD 156 Query: 162 --------IP-----------ILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLE 196 IP ++ G+I + G +V Y TD P E Sbjct: 157 VERARAQEIPQKFWSRLQKGETIEHEGKILTPDMVLGEKRRGISVTYTTDTRPVP-AIAE 215 Query: 197 KLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTH----MHVDLD 245 + D I + + N + H E+ K + NP+ LTH + + Sbjct: 216 YAADNDLFICEGMYGEKEKIANARENKHMMFQEAAKLGKEANPREMWLTHYSPSLMHPEE 275 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 Y ++ ++ A DG Sbjct: 276 YLNEIREIFPKIKTARDGWSAEL 298 >gi|195475308|ref|XP_002089926.1| GE21666 [Drosophila yakuba] gi|194176027|gb|EDW89638.1| GE21666 [Drosophila yakuba] Length = 743 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 106/298 (35%), Gaps = 64/298 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 433 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 472 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q+ R + + A+ +H HADH G+ GL L+++R ++ A P + Sbjct: 473 GQIARLYGREKGQLILRQLQAIYVSHLHADHHIGLIGL----LRERRQLEPRADPLILLA 528 Query: 118 LFESFRYC-FKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + F + T +V + + + G+ L +H +S Sbjct: 529 PRQIEPWLEFYNREIETVEDAYTLVANGELLASPLSGEQVKPLGITSISTCLVRHCP-NS 587 Query: 174 LGFRF----------GNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSS 216 G + Y D P + ++ ++ LI +A + Sbjct: 588 FGISLILAAKPNSEPVKITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDLEEEARLKT 645 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSSP 269 H ++S+++++ +N ++ ILTH Y PS RV AFD M+ + Sbjct: 646 HSTVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDNMEVTIE 700 >gi|329117456|ref|ZP_08246173.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] gi|326907861|gb|EGE54775.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] Length = 259 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------G 97 S + + +++D G ++ +E L +DAV+ +H H DH+ + LR Sbjct: 21 SYLITGDNGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYRQLYP 80 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y H + F + L + + + + G Sbjct: 81 KHLWEPKALPIYG------HNEDQFEFAKLTLPEVSV----------GIAYDVTGTQSIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + D F + + Q D + D Sbjct: 125 PFDIAFIKTVH-PVVCYAFRIVERKTGQVFVFTGDTGYFDELA-DFAQGADLFLADVYLY 182 Query: 212 G---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + + K +LTHM Sbjct: 183 EGNENHFAHLTSKEAGQIAQQARVKKLVLTHM 214 >gi|237736738|ref|ZP_04567219.1| predicted protein [Fusobacterium mortiferum ATCC 9817] gi|229420600|gb|EEO35647.1| predicted protein [Fusobacterium mortiferum ATCC 9817] Length = 225 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 77/211 (36%), Gaps = 29/211 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +T + D G + ++L+ ++ V TH H DH+ + L Y + Sbjct: 26 EDTLYLFDCGETVFDEILKRKLIEKKYIKVFITHTHCDHVGSLGSLLSYCYYVQ------ 79 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH- 168 ++ + + Y + + I + I+ ++ H Sbjct: 80 -DKKIVEVIHPT-DYL---------KKFLEIVGIGDELYNYSYSLNNNEIKVEAVVVPHV 128 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLE-KLQN-LDFLIID-ALKNGLHSSHFSLS 221 + S G+ V Y D P E LE L +D L +D + K H++H ++ Sbjct: 129 SDMISYGYLISIKGKKVFYSGDCARVPEEILEKYLSGEIDELYLDISSKKTSHAAHGNIV 188 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + + I + KN MH+D DY V++ Sbjct: 189 DLEEMIPIDKRKNVYC--MHLDKDYREVIRE 217 >gi|222064075|emb|CAQ86700.1| putative metallo-beta-lactamase superfamily III protein [Histomonas meleagridis] Length = 327 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 92/257 (35%), Gaps = 55/257 (21%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + T+LG G+ + R SS I S +++D GP Sbjct: 54 TFSVTVLGTGS-------GYLYP---------HRANSSHLIQTPS-----GFILLDCGPG 92 Query: 64 FYMQVLR--------EQVLSIDAVLYTHPHADHIHGI----DGLRGYFLKQKRPIDVYAA 111 Q+ R E + +++ + +H H+DH+ G+ Y KQ I + Sbjct: 93 TLSQIQRKFGFSGAIEVLKNLNCIWISHYHSDHVFGLIGLLFDRVKYTNKQ---IPLMCP 149 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGR 170 + K++ + F D +I+ + P+ + A E + + Sbjct: 150 INLSKYVKSN--ESFYGND------FFKVNIIQRTNNPVQVGDATIQSCEVLHVPDSMAC 201 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--------HFSLSE 222 + ++G + + Y D N E N DFLI +A H ++ + Sbjct: 202 LITVGGK--RIVYSGDRNPLHREMERSFGNCDFLIHEATFKDEDYVSEEEEALRHTTIEQ 259 Query: 223 SLKKIELINPKNAILTH 239 +++ +++N K +L H Sbjct: 260 AIESAKMMNAKYVLLVH 276 >gi|154492670|ref|ZP_02032296.1| hypothetical protein PARMER_02305 [Parabacteroides merdae ATCC 43184] gi|154086975|gb|EDN86020.1| hypothetical protein PARMER_02305 [Parabacteroides merdae ATCC 43184] Length = 267 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 78/227 (34%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFYM--QVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G +VL+++ I AVL TH HADHI L +K I VY Sbjct: 26 VLIDAGIGIRTIKKVLKDKAIDFSKIVAVLITHDHADHI-----KTVGCLGEKHCIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +S +V+ + +VP ++ H Sbjct: 81 TEAVHRGISKS---------RYVEETLVSSRKVIEKEVPFMIR----DFRITAFEVPHDS 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---- 216 ++G+ TDV + + + LII+A L+ G + + Sbjct: 128 TDNVGYYIEYGDHKFTLATDVGHITETVSKYMGMANHLIIEANYDEEMLQFGTYPAFLKE 187 Query: 217 -------HFSLSESLKKIE---LINPKNAILTHMHVDLDYDMVLKST 253 H S E+ + + K+ L H+ D ++ + T Sbjct: 188 RVASPTGHLSNREAAEFLATHYDPKLKDIWLCHLSRDNNHPELAYKT 234 >gi|73670593|ref|YP_306608.1| metal dependent hydrolase [Methanosarcina barkeri str. Fusaro] gi|72397755|gb|AAZ72028.1| metal dependent hydrolase [Methanosarcina barkeri str. Fusaro] Length = 251 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 92/283 (32%), Gaps = 51/283 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++ P+ R +S + + R +++D G Sbjct: 1 MEITFLGTGVAI----------------PQKNRVQSGILV-----RLEEKPLLIDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFES 121 + V +D VL +H H DH+ + L + + VY + + Sbjct: 40 LNRFPEAGVSHTEVDTVLLSHLHLDHVADLHPLIKANWLRGNTSMKVYGPEGTEEWFSKV 99 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 ++ L + V+ VIE G E H + +L +R Sbjct: 100 ID-AYEYLQEE-----VDVDVIELTP-GKEFTPEGFDCEISCTAASHS-VPTLAYRVTGE 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN-----GLHSSHFSLSESL-KKIELIN 231 G Y D + ++ D LI + H++ SL++ L + I Sbjct: 152 DGEFVYSADT-EPSRDVMDLAAGADLLIHECSFPSDMNVTNHTTPSSLADILEEYNNEIG 210 Query: 232 PKNAILTHMHVDL-DYD-MVLKSTPSR----VVPAFDGMQFSS 268 + LTH + ++ ++ + V+ A D M+ Sbjct: 211 --SICLTHFYPEMRGHEREAVHRLKGYFEGEVILAEDLMKLEL 251 >gi|315172396|gb|EFU16413.1| ribonuclease Z [Enterococcus faecalis TX1346] Length = 313 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGVADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|256965002|ref|ZP_05569173.1| ribonuclease Z [Enterococcus faecalis HIP11704] gi|307273098|ref|ZP_07554344.1| ribonuclease Z [Enterococcus faecalis TX0855] gi|256955498|gb|EEU72130.1| ribonuclease Z [Enterococcus faecalis HIP11704] gi|306510083|gb|EFM79107.1| ribonuclease Z [Enterococcus faecalis TX0855] Length = 313 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGVADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|229545696|ref|ZP_04434421.1| ribonuclease Z [Enterococcus faecalis TX1322] gi|256619186|ref|ZP_05476032.1| ribonuclease Z [Enterococcus faecalis ATCC 4200] gi|256762622|ref|ZP_05503202.1| ribonuclease Z [Enterococcus faecalis T3] gi|256853248|ref|ZP_05558618.1| ribonuclease Z [Enterococcus faecalis T8] gi|256959102|ref|ZP_05563273.1| ribonuclease Z [Enterococcus faecalis DS5] gi|257079133|ref|ZP_05573494.1| ribonuclease Z [Enterococcus faecalis JH1] gi|257082430|ref|ZP_05576791.1| ribonuclease Z [Enterococcus faecalis E1Sol] gi|257085062|ref|ZP_05579423.1| ribonuclease Z [Enterococcus faecalis Fly1] gi|257086979|ref|ZP_05581340.1| ribonuclease Z [Enterococcus faecalis D6] gi|257422490|ref|ZP_05599480.1| ribonuclease Z [Enterococcus faecalis X98] gi|294781596|ref|ZP_06746932.1| ribonuclease Z [Enterococcus faecalis PC1.1] gi|300861042|ref|ZP_07107129.1| ribonuclease Z [Enterococcus faecalis TUSoD Ef11] gi|307269504|ref|ZP_07550843.1| ribonuclease Z [Enterococcus faecalis TX4248] gi|307275847|ref|ZP_07556986.1| ribonuclease Z [Enterococcus faecalis TX2134] gi|307289231|ref|ZP_07569187.1| ribonuclease Z [Enterococcus faecalis TX0109] gi|307291870|ref|ZP_07571741.1| ribonuclease Z [Enterococcus faecalis TX0411] gi|312901904|ref|ZP_07761168.1| ribonuclease Z [Enterococcus faecalis TX0470] gi|229309146|gb|EEN75133.1| ribonuclease Z [Enterococcus faecalis TX1322] gi|256598713|gb|EEU17889.1| ribonuclease Z [Enterococcus faecalis ATCC 4200] gi|256683873|gb|EEU23568.1| ribonuclease Z [Enterococcus faecalis T3] gi|256711707|gb|EEU26745.1| ribonuclease Z [Enterococcus faecalis T8] gi|256949598|gb|EEU66230.1| ribonuclease Z [Enterococcus faecalis DS5] gi|256987163|gb|EEU74465.1| ribonuclease Z [Enterococcus faecalis JH1] gi|256990460|gb|EEU77762.1| ribonuclease Z [Enterococcus faecalis E1Sol] gi|256993092|gb|EEU80394.1| ribonuclease Z [Enterococcus faecalis Fly1] gi|256995009|gb|EEU82311.1| ribonuclease Z [Enterococcus faecalis D6] gi|257164314|gb|EEU94274.1| ribonuclease Z [Enterococcus faecalis X98] gi|294451292|gb|EFG19758.1| ribonuclease Z [Enterococcus faecalis PC1.1] gi|300850081|gb|EFK77831.1| ribonuclease Z [Enterococcus faecalis TUSoD Ef11] gi|306497136|gb|EFM66682.1| ribonuclease Z [Enterococcus faecalis TX0411] gi|306499940|gb|EFM69301.1| ribonuclease Z [Enterococcus faecalis TX0109] gi|306507539|gb|EFM76670.1| ribonuclease Z [Enterococcus faecalis TX2134] gi|306514124|gb|EFM82700.1| ribonuclease Z [Enterococcus faecalis TX4248] gi|311291016|gb|EFQ69572.1| ribonuclease Z [Enterococcus faecalis TX0470] gi|315027849|gb|EFT39781.1| ribonuclease Z [Enterococcus faecalis TX2137] gi|315029258|gb|EFT41190.1| ribonuclease Z [Enterococcus faecalis TX4000] gi|315031944|gb|EFT43876.1| ribonuclease Z [Enterococcus faecalis TX0017] gi|315037105|gb|EFT49037.1| ribonuclease Z [Enterococcus faecalis TX0027] gi|315145042|gb|EFT89058.1| ribonuclease Z [Enterococcus faecalis TX2141] gi|315156157|gb|EFU00174.1| ribonuclease Z [Enterococcus faecalis TX0043] gi|315162328|gb|EFU06345.1| ribonuclease Z [Enterococcus faecalis TX0645] gi|315164140|gb|EFU08157.1| ribonuclease Z [Enterococcus faecalis TX1302] gi|329571914|gb|EGG53592.1| ribonuclease Z [Enterococcus faecalis TX1467] Length = 313 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGVADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|294625991|ref|ZP_06704602.1| metallo-beta-lactamase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599729|gb|EFF43855.1| metallo-beta-lactamase superfamily protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 335 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 75/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 +VD G Q+ + + + + TH H+DH + + + P+ Sbjct: 84 DGQPYLVDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 143 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F A++ + PP I + D P + Sbjct: 144 LYGPPG-----IARMVEAFVAMNAIDIQARIREEGRPPFEALIHVHEFDQPGTV-LRNDQ 197 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF +V + D PA + E +N D L+ + A Sbjct: 198 VTVTATLVDHYTLKPAFAYRFEAPDRSVVFSGDTRYLPALA-EFAKNTDVLVHEVMYLPA 256 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E N K +L H D + Sbjct: 257 LQTMLKTNDNAPTLLDHLLKSHSTSEEVGMIATAANAKMLVLNHFVPGGDASITDAMWSE 316 Query: 256 RVVPAFDG 263 + G Sbjct: 317 GARKHYAG 324 >gi|194857949|ref|XP_001969068.1| GG25221 [Drosophila erecta] gi|190660935|gb|EDV58127.1| GG25221 [Drosophila erecta] Length = 743 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 107/297 (36%), Gaps = 62/297 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 433 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 472 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q++R + + A+ +H HADH G+ GL L+++R ++ A P + Sbjct: 473 GQIVRLYGREKGQIILRQLQAIYVSHLHADHHIGLIGL----LRERRQLEPSADPLILMA 528 Query: 118 LFESFRYC-FKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----- 168 + + F T +V + + + G+ L +H Sbjct: 529 PRQIEPWLEFYNRQIETVEDAYTLVANGELLTSPLSGEQVEPLGITSISTCLVRHCPNSF 588 Query: 169 GRISSLGFRFG----NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSH 217 G +L + + Y D P + ++ ++ LI +A +H Sbjct: 589 GISLTLAAKHNSEPVKITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDLEEEARLKTH 646 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFSSP 269 ++S+++++ +N ++ ILTH Y PS RV AFD M+ + Sbjct: 647 STVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDNMEVTIE 700 >gi|256546121|ref|ZP_05473474.1| metallo-beta-lactamase family protein YycJ [Anaerococcus vaginalis ATCC 51170] gi|256398238|gb|EEU11862.1| metallo-beta-lactamase family protein YycJ [Anaerococcus vaginalis ATCC 51170] Length = 263 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 69/230 (30%), Gaps = 54/230 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLR---EQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + +++D G +L E ++DA+ TH H DH+ G Sbjct: 15 SVFVEHKGSK-----ILIDCGFSGRKIENLLSQIGENPKNLDAIFLTHEHIDHVKG---- 65 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + ++ I +YA ++ + I+ Sbjct: 66 -ASVMSRRYDIPIYANKGTWLSFIKN-------------AGKLKDENIKIFKSNSFFNFN 111 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------ 205 I PI H +GF + TD L +++ D Sbjct: 112 SFDI--FPISIHHDASEPVGFILYLDNKKITVLTDTGIIDERILNEIKGSDVYYFEANHD 169 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELINPK--NAILTHMH 241 +DALK G ++ H S + + + + K L H+ Sbjct: 170 LDALKRGPYTYSMKVRIMGKMGHLSNEQSAKSLADALQGKNEKIFLAHLS 219 >gi|212550456|ref|YP_002308773.1| ribonuclease Z [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|254808604|sp|B6YQ90|RNZ_AZOPC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|212548694|dbj|BAG83362.1| ribonuclease Z [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 289 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 96/285 (33%), Gaps = 77/285 (27%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + ILGCG++L P R + SS ++ E ++D G Sbjct: 3 QFEVNILGCGSAL----------------PATRHSLSSQIVNLNGEL-----YMIDCGEG 41 Query: 64 FYMQ--VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLF 119 +Q + + ++ + +H H DH G+ GL F+ R +D +Y+ PD Sbjct: 42 SQLQFRAMNLKFQRLNHIFISHLHGDHCFGLLGLVSMFVLLGRTVDLCIYSHPDTKCLFQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 +Y FK L P V + + + V+ I +H R+ ++GF F Sbjct: 102 PLIKYFFKEL-----PFQVVFHPFDPTCSGLIFEDQ--VLRVFTIPLKH-RVPTVGFLFE 153 Query: 179 -------------GNV-----------------------AYCTDVNAFPAESLEKLQNLD 202 GN AYC+D + E + + +D Sbjct: 154 EKPIYLFDNNMQRGNFVTSGSQTVSSSCLSKLASFSCRYAYCSDTVYY-EEIIPLITGVD 212 Query: 203 FLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L +A L + H S ++ N K +L H Sbjct: 213 LLYHEATYSNKDLARAKETYHSSAQQASLIARAANVKKLMLGHFS 257 >gi|261405747|ref|YP_003241988.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261282210|gb|ACX64181.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 245 Score = 69.0 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 95/251 (37%), Gaps = 36/251 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 +LG G KN ++ I N T+++D G Sbjct: 2 TLTLQMLGTG----------------SAFAKNY-YNNNALI-----HDGNFTLLIDCGIT 39 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLF 119 + + + +DAVL TH HADH+ G++ L + +K K R + +Y A ++ ++ Sbjct: 40 APLALHQMNKTFNDVDAVLITHIHADHVGGLEEL-AFIMKMKYDRKLPLYIAEALVEPIW 98 Query: 120 ES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 E ++ + + + ++ S+G +E I G+ S + Sbjct: 99 EHTLKGGLYQQGHISSLQDVFDVHPLKPGVRAAI--SSGISVELIHTQHIPGKDSYSLYL 156 Query: 178 FGNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 + Y D+ F L++L ++ + ++ + G H +L E L + I + Sbjct: 157 NDRIFYSADMV-FDPILLKQLVNERDCEVILHECQLQGPGEVHTTLDELLSLPQEIQ-ER 214 Query: 235 AILTHMHVDLD 245 L H +++ Sbjct: 215 TYLMHYSDEVE 225 >gi|291532340|emb|CBL05453.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Megamonas hypermegale ART12/1] Length = 248 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 72/228 (31%), Gaps = 56/228 (24%) Query: 51 GSNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 N +++D G Q L + + +DA+ TH H DHI G+ L + Sbjct: 19 DDNNAILIDMGISTRKLKQALAQLHLNIEDLDAIFITHEHIDHIRGLK-----TLTKNYN 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y+ +K + + I ++N G + Sbjct: 74 VPIYSKTATLKQIAIT--------------QKFTDINLKNCQALTTNNIDIGNLAIKIFN 119 Query: 166 QQHGRISSLGFRF-------------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 H I +G+ + TD+ L+N D L+++A Sbjct: 120 ISHDAIDPVGYTISKYKDNAKTKKFTEKITLATDLGFVSETVQSALENSDILVLEANHDL 179 Query: 209 --LKNGLHS-----------SHFSLSESLKKIELINPK--NAILTHMH 241 L+NG + H S ++ I + K IL H+ Sbjct: 180 KLLQNGQYPWSLKKRILSTKGHLSNIDAGFAINRLQAKPQQIILAHLS 227 >gi|93279549|pdb|2FK6|A Chain A, Crystal Structure Of Rnase ZTRNA(THR) COMPLEX Length = 320 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 99/329 (30%), Gaps = 88/329 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P +N +S+ + + ER + + D G Sbjct: 1 MELLFLGTGA--GIP-----------AKARNV---TSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA--------- 111 Q+L + I+ + TH DH++G+ GL G Q + VY Sbjct: 43 QHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIET 102 Query: 112 --PDCMKHLF------------------------------ESFRYCFKALDDRTYPPIVN 139 HL E+F Y + D Sbjct: 103 SLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADV 162 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-------FRFGNVAYCTDVNAFPA 192 + P+ K G + + GRI G + +V + D Sbjct: 163 LKEMNIPPGPVYQKIKKGET----VTLEDGRI-INGNDFLEPPKKGRSVVFSGDT-RVSD 216 Query: 193 ESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH--VDL 244 + E ++ D ++ +A H + ++ + K ILTH+ Sbjct: 217 KLKELARDCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQG 276 Query: 245 DYDMVLKSTPSRVVP----AFDGMQFSSP 269 D + L+ V P A+D ++ + P Sbjct: 277 DASLELQKEAVDVFPNSVAAYDFLEVNVP 305 >gi|325180322|emb|CCA14725.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1232 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 89/279 (31%), Gaps = 67/279 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 LG G + P R S + + + + ++D G Sbjct: 510 QIVFLGTGCAA----------------PSKLRGSSGIYLDFCTGKEG---FLLDCGEGTF 550 Query: 64 ---FYMQVLREQVLSID---AVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMK 116 +E + I + +H HADH GI L + + V A ++ Sbjct: 551 GNLCRHYGRKEGIQRISNLCGIWISHHHADHQAGIVTLLEVFAQHSDNVLLVIAPESVLQ 610 Query: 117 HLFE--------SFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + +A+++ +Y + N+ P+ + ++P+ Sbjct: 611 FIRTWQGTLLHPRIHLITCRAMNNCSYSSAFWQHTLRKNN-PLTRLGILSDVRSVPV--- 666 Query: 168 HGRISSLGFRFG-----NVAYCTD---VNAFPAESLEKLQNLDFLI----------IDAL 209 H + G + Y D NA +E Q++D LI DA+ Sbjct: 667 HHCYDAFGVVLTLSDGRRLLYSGDTRPCNAL----VEAGQDVDLLIHEATFEDTRQEDAI 722 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + H ++SE+++ + + +LTH + M Sbjct: 723 RKR----HSTVSEAMQVARKMRARRVVLTHFSAGFPFRM 757 >gi|320107303|ref|YP_004182893.1| pyrroloquinoline quinone biosynthesis protein PqqB [Terriglobus saanensis SP1PR4] gi|319925824|gb|ADV82899.1| pyrroloquinoline quinone biosynthesis protein PqqB [Terriglobus saanensis SP1PR4] Length = 311 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 102/316 (32%), Gaps = 66/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 HF +LG A G P+ CD + R + L++ +++ PD Sbjct: 2 LHFKLLGTAAGGGFPQWNCACQLCDLCRKQPLRAAARLQLQSAISSDGENWFLLNASPDL 61 Query: 65 YMQVLR-----------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Q+ ++ I A++ T D + G+ LR + P+ VYA Sbjct: 62 RSQIEATPELQPVATKGQRNTPIRAIILTSADLDQVLGLLLLREFQ-----PLLVYATSV 116 Query: 114 CMKHLF-ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + L SF F+ LD P + I I N+ A I PI G + Sbjct: 117 VRQTLQANSF---FRMLD--RLPGQITWIDIRPNE---SFPLADSQIVCTPIPLP-GALP 167 Query: 173 --------------SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 S+G +AY V ++ + +++DA Sbjct: 168 FYASTIPGAPEGEASIGLLLECEGKRIAYTPSVPEVTDNLRHLYRSCEAIMMDATFWSDT 227 Query: 209 ----LKNGLHSS----HFSL---SESLKKIELINPKNAILTHMHV-----DLDYDMVLKS 252 L+ G + H L +L + IN +L H++ D ++ Sbjct: 228 ELNRLQTGTPLARSIGHVPLGGEDGTLALLSNINVPTKVLIHINNSNPILDPLSAEHEET 287 Query: 253 TPSRVVPAFDGMQFSS 268 + DG + + Sbjct: 288 LRAGWQIGHDGWELTL 303 >gi|212711555|ref|ZP_03319683.1| hypothetical protein PROVALCAL_02629 [Providencia alcalifaciens DSM 30120] gi|212685657|gb|EEB45185.1| hypothetical protein PROVALCAL_02629 [Providencia alcalifaciens DSM 30120] Length = 246 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 92/245 (37%), Gaps = 49/245 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M+ + T++G G + D RT +S+ + ++VD Sbjct: 1 MQPSFQITVVGTGDAY------------DSE-----RTNASILVEEFG-----YQLLVDC 38 Query: 61 GPDFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYA--APDC 114 GP Q L + V +DA+ TH H DH G+ L + ++K P+ + A Sbjct: 39 GPSV-PQALFGKMHVEDLDAIYLTHTHPDHCLGLTSLLNWMDSYQRKHPLTIIAQREQWV 97 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR---- 170 + +F + + +I+ N I G + L QH Sbjct: 98 LLAPLLAFAH--------WPKAQLGFEIIQQNSEEIQF---IGDWKVTTALTQHSVSNRS 146 Query: 171 --ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE 228 +++ R ++ Y D P LQ+ D++ ++ +H SH S + ++++ Sbjct: 147 LHLTANSGR--SLFYSGDGEISPQGEQLALQS-DWVFLECETLDIHPSHGSWASLHQRLQ 203 Query: 229 LINPK 233 ++PK Sbjct: 204 KLSPK 208 >gi|257063694|ref|YP_003143366.1| metal-dependent hydrolase, beta-lactamase superfamily III [Slackia heliotrinireducens DSM 20476] gi|256791347|gb|ACV22017.1| metal-dependent hydrolase, beta-lactamase superfamily III [Slackia heliotrinireducens DSM 20476] Length = 266 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 96/296 (32%), Gaps = 69/296 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 +LG G + V + + + +VD G Sbjct: 1 MRIVMLGTGHAT-VTKCYNTC---------------------YAYEEDGRSFLVDAGGGN 38 Query: 64 -FYMQVLREQVL--SIDAVLYTHPHADHIHG---IDGLRGYFLKQK---RPIDVYAAPDC 114 Q+ + + ++ + TH H DH+ G I + + + RP VYA Sbjct: 39 GILSQLEKAGLELADMEGMFITHAHTDHVLGAVWIIRMVAASMHRGQRSRPFTVYANEKV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M+ L C A + + + + +++ D + + + + + Sbjct: 99 MRVLGTIADMCLPAPYLKQFGEPLRFVTLQHGD-----EFDVLSMRWTAFDIESEKEPQM 153 Query: 175 GFRF----GNVAYCTDVNAFPAESL--EKLQNLDFLIIDAL-----KNGLHS---SHFSL 220 G+R G V CT PA ++ L +D+L+ +A + H +H ++ Sbjct: 154 GYRAVLANGTVIGCT--GDEPAHAVNDPYLTGVDWLLTEAFCLSEDEETFHPHAKNHSTV 211 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SRVVPAFDGMQFSSP 269 E+ + + K +L Y + P + A+DG + P Sbjct: 212 KEAAASAQRLGCKRVLL--------YHTEDATLPTRRQAYTAEARTAYDG-EIFVP 258 >gi|170590780|ref|XP_001900149.1| metallo-beta-lactamase superfamily protein [Brugia malayi] gi|158592299|gb|EDP30899.1| metallo-beta-lactamase superfamily protein [Brugia malayi] Length = 784 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 101/312 (32%), Gaps = 78/312 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG ++ VP TN +N S + N + VD G Y Sbjct: 430 RICFLGTSSA--VP-----------TNFRN----VSA---YFLQFNENFCIFVDCGEGSY 469 Query: 66 MQVLREQVL---------SIDAVLYTHPHADHIHGIDGL----RGYFLKQK---RPIDVY 109 Q LR + AV TH H DH HGI + + F+K+ +P+ V Sbjct: 470 GQ-LRTLFGDVACEDLLLKLSAVFITHGHQDHYHGIFTIVQCRKELFMKRGMTYKPLIVA 528 Query: 110 AAPDCMK---HLFESFRYCFKALDDRTYPPIVNPI------VIENNDVPICMKSAGGVIE 160 +K + SF + + I+ + IE D+ + IE Sbjct: 529 GGNHVLKVFRDVDRSFGNYTRDMHIVNISKILWTLSQQKGGPIEAVDLTGEIPPEIIDIE 588 Query: 161 ------AIPILQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLII--- 206 I + H R +++G+ F + D P E L D L++ Sbjct: 589 KLGFKSVIAVKVNHAR-TAVGYIFTDLKNQKFVFSGDT--MPCEQLVN-HGKDALVLVHE 644 Query: 207 -----DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS------ 255 D + L+ H ++ ++ + KN +LTH + P Sbjct: 645 STFGDDEEAHALYKKHSTMKQAFDVAARMGAKNLVLTHFSAKYPK---VPPLPDYIEKAG 701 Query: 256 RVVPAFDGMQFS 267 V A D M + Sbjct: 702 NVTIAMDNMIVT 713 >gi|189425025|ref|YP_001952202.1| beta-lactamase [Geobacter lovleyi SZ] gi|189421284|gb|ACD95682.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 262 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 87/240 (36%), Gaps = 35/240 (14%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYA 110 + ++++D G + E+ SI + TH H DHI GI L + +DVYA Sbjct: 24 DDSLLLDAG-TIGSVLTEEEQWSIRNIFITHAHLDHIRGIPALADNIIVKNLRHLVDVYA 82 Query: 111 APDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIENND-------VPICMKSAGGVI 159 ++ L D P P++ VI+ ++ P G + Sbjct: 83 PLSVIEALRTHLFNGLIWPDFTCLPTPEEPVLRFNVIQPSEPVVLGNLTPERRTIDGYSL 142 Query: 160 EAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 A+P+ H + ++G+ + Y D E D LI++ Sbjct: 143 TAVPV---HHTVPAVGYCVEHAGRRLVYTGDT-GPTDEIWRYASGADVLIVEVSFPNNQE 198 Query: 216 S------HFS---LSESLKKIELINPKNAILTH---MHVDLDYDMVLKSTPSRVVPAFDG 263 + H L + L KI + PK ++TH + DL D + + +V DG Sbjct: 199 ALALLTQHLCCSLLEKELAKIAEL-PKRILITHPKPQYYDLIRDEIAQMGIRQVELLRDG 257 >gi|296158997|ref|ZP_06841825.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gi|295890872|gb|EFG70662.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 257 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L V +DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSAKEVERRLTRLGASVEGLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + I+ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADKADIDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GDLSILPYTVPHDAREPLQYVFSNGASRLGVLTDVGTSTPHISAMLSGCDALVLEC 166 >gi|197105711|ref|YP_002131088.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] gi|196479131|gb|ACG78659.1| metallo-beta-lactamase family protein [Phenylobacterium zucineum HLK1] Length = 362 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 83/299 (27%), Gaps = 63/299 (21%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYT 82 GA P R + + IVD G + ++ +DA L T Sbjct: 59 CGAGSPMPDPTRAGPCTAVL------AGRQLFIVDAGAGSVKNLSLMNFPPARVDAALIT 112 Query: 83 HPHADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKALDD----RTY 134 H H+DHI G+ L P+ VY + + + F + Sbjct: 113 HFHSDHIDGLGEL-MLQRWAGGAWPAPLPVYGPTGV-EQVVDGFEAAYGPDRGYRIAHHG 170 Query: 135 PPIVNPIVIENNDVPI--------CMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 P + P + P + G + A P+ ++G+RF +V Sbjct: 171 PQVTPPSGFGGDPRPFAPGAQDVVLIDQPGLRVTAFPVPHS-PAEPAVGYRFDYKGRSVV 229 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNG-----------------LH-----SS-HFS 219 D A P + D L+ + L H S H + Sbjct: 230 ISGDTAASPRLEAAA-RGADLLVHEGLSPKLVALQGRSADKGGKANLSHILHDIPSYHAT 288 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVL--------KSTPSRVVPAFDGMQFSSPI 270 E + + + TH+ L + K + DG S P Sbjct: 289 PEEVAGIAQRAGVRYLLFTHVIPPLPIRALEGPWLGKAGKIYAGAIRVGRDGDTISLPA 347 >gi|157363955|ref|YP_001470722.1| beta-lactamase domain-containing protein [Thermotoga lettingae TMO] gi|157314559|gb|ABV33658.1| beta-lactamase domain protein [Thermotoga lettingae TMO] Length = 247 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 36/228 (15%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGID 93 R +S + +++ + M+ L L + V+ TH H DH++G+ Sbjct: 16 NRDNTSFLV---------GDTLIECSGNAFGKMRKLGYNPLRLKNVIITHGHVDHVYGLP 66 Query: 94 GLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L R P+ +Y + + +L +++ F ++ P+ +E Sbjct: 67 SLVEMMRLSGRENPLKIYVS-EVFSNLVKTYLGMFNFMEKERR----FPVEVEEIRYGFQ 121 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNV----AYCTD---VNAFPAESLEKLQNLDFL 204 + +IE P+ + + G + + Y +D +S D L Sbjct: 122 LIDEDLIIEFFPVKH---SVENFGLKIKSFDSIVVYSSDTEPCKEVIEQSF----GADLL 174 Query: 205 IIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 I +A L + H ++ + + K L H+ D++ + Sbjct: 175 IHEATCSYLFSKRIEGHTCAEDAARIAQQSGVKILCLVHLGPDINNEK 222 >gi|55379160|ref|YP_137010.1| metallo-beta-lactamase-like [Haloarcula marismortui ATCC 43049] gi|74552598|sp|Q5UZJ9|RNZ_HALMA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|55231885|gb|AAV47304.1| metallo-beta-lactamase-like [Haloarcula marismortui ATCC 43049] Length = 311 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 105/331 (31%), Gaps = 89/331 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG S VP +R SS+ ++R + ++ D G Sbjct: 2 TMRVTFLGT--SGAVPTT--------------QRNTSSIFVNRDGD-----YLLFDCGEG 40 Query: 64 FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q++R +ID + TH H DH+ GI GL F +++R I ++ ++ + Sbjct: 41 TQRQMMRYGTGFAIDHLFVTHLHGDHVLGIPGLLQTWDFNERERAIAIHTPAGTRGNIKQ 100 Query: 121 ---------SFR-----------------YCFKALDDRTYPPIVNPIVIENNDV-PICMK 153 SF Y +A++ V ++ E++ + Sbjct: 101 LIQANGTTPSFPVRINEVSAGDVVLDRSEYEIRAIETAHRCASVGYVLDEDDRKGKFDRE 160 Query: 154 SAGGVIEAIPIL----------QQHGRISSL----------GFRFGNVAYCTDVNAFPAE 193 A P +H + G RF Y D P E Sbjct: 161 KAEEEFGIPPGPKYSKLHRGEAVEHEGETIQPEAVVGPARPGRRF---VYTGDT--LPTE 215 Query: 194 S-LEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 S +E ++ D L+ DA + ++H + E+ LTH+ Sbjct: 216 SVIEASEDADLLVHDATFAEDRKERAKATAHSTAREAADVARQAGASTLALTHISTRYAA 275 Query: 247 ------DMVLKSTPSRVVPAFDGMQFSSPIP 271 D + VV A DGM+ P Sbjct: 276 SADELVDEARDAFDGEVVLAEDGMERRVEFP 306 >gi|229101790|ref|ZP_04232505.1| Beta-lactamase domain protein [Bacillus cereus Rock3-28] gi|228681583|gb|EEL35745.1| Beta-lactamase domain protein [Bacillus cereus Rock3-28] Length = 244 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 62/208 (29%), Gaps = 33/208 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHAPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSNAVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHV 242 H + +E + N K +LTH+ Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPH 214 >gi|153813589|ref|ZP_01966257.1| hypothetical protein RUMOBE_04012 [Ruminococcus obeum ATCC 29174] gi|149830334|gb|EDM85426.1| hypothetical protein RUMOBE_04012 [Ruminococcus obeum ATCC 29174] Length = 265 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 86/231 (37%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT V+VD G + + L +D +L TH H+DHI G+ + +K I Sbjct: 20 DNTHVLVDIGISGKKMETGLNSLELTGRDLDGILITHEHSDHIKGLG-----VISRKYGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + P I+ D P + ++ P Sbjct: 75 PIYATAGTVDAMVRT--------NALGKIPEGIFHEIQE-DEPFMIN----DLKVNPFTI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H +G+R +V TD+ + +E LQ LD L+++A L+ G + Sbjct: 122 PHDAAQPVGYRLEHEGHSVGIATDLGKYNDYIIENLQGLDALLLEANHDIRMLQVGKYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + N K L H+ + +Y+ + T Sbjct: 182 YLKQRILGDRGHLSNENAGRLLCRLLHDNLKAIFLGHLSRENNYEELAYET 232 >gi|317480133|ref|ZP_07939243.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] gi|316903680|gb|EFV25524.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 4_1_36] Length = 267 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 61/234 (26%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHI---HGIDGLRGYFLKQKRP 105 +++D G +++ + I AV TH HADHI G+ Sbjct: 26 ILIDAGIAVRT--IKKGLKEAGISMEMIRAVFVTHDHADHIKAVGGLGEKLN-------- 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + + S+ K Y P+ +E+ Sbjct: 76 IPIYTTARIHEGINRSYCMTEKLYSSVRYLEKQQPMQLED-------------FHIESFE 122 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------- 208 H ++G+ A+ TD+ + E ++ ++LI++A Sbjct: 123 VPHDGTDNVGYCIEIDGKVFAFLTDLGEITPTAAEYIRKANYLILEANYDEEMLRMGTYP 182 Query: 209 ----LKNGLHSSHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 + H+ H S + + + E + L H+ D ++ + T Sbjct: 183 QYLKERITSHTGHMSNIATAEFLSENMTEHLQ--YIWLCHLSKDNNHPELAYKT 234 >gi|228996281|ref|ZP_04155926.1| Beta-lactamase domain protein [Bacillus mycoides Rock3-17] gi|229003948|ref|ZP_04161754.1| Beta-lactamase domain protein [Bacillus mycoides Rock1-4] gi|228757317|gb|EEM06556.1| Beta-lactamase domain protein [Bacillus mycoides Rock1-4] gi|228763473|gb|EEM12375.1| Beta-lactamase domain protein [Bacillus mycoides Rock3-17] Length = 244 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAVL +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVLLSHYHHDHVADIGVLQYARLITSMAKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D + + + + + G Sbjct: 85 LPELPIYG----------------HGFDVQGFSSLTHAPHTKGIVYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H I R + Y D + P + ++ D I + + Sbjct: 129 FLKTVHPVI-CYAMRITVGDKVIVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + +++ R+ A G ++S Sbjct: 187 AGHMNSTEVADVAKNANVKELLLTHLPHTGNISDLVEEAKQIFDGRITLAHSGYVWNS 244 >gi|84683585|ref|ZP_01011488.1| hydrolase [Maritimibacter alkaliphilus HTCC2654] gi|84668328|gb|EAQ14795.1| hydrolase [Rhodobacterales bacterium HTCC2654] Length = 289 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 48/258 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PID 107 + +++D G Q+ R +V I V+ +H H DHI + L G + +R P+ Sbjct: 23 GDQAILIDCGEGALGQLTRAEVPFRDIHTVVLSHHHFDHIGSLFALLGLNMMTQRNQPLR 82 Query: 108 VYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIV---IENNDVPICMKSAGGVIEAIP 163 ++ + + C P P +E ++ G + Sbjct: 83 IFGPTGTARIVAGLTDACDVPNEIGFGVPGQTLPHARDFVEVREINPGDTVEIGEVTLTC 142 Query: 164 ILQQH---------GRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI---- 205 H G SL RF +V + D P +++E+L Q +D L+ Sbjct: 143 CENTHYRGEADHGSGWYLSLSLRFDTPDRSVVFTGDTG--PCKAVERLAQGVDLLVGELM 200 Query: 206 -IDALKNGLHSS-------------------HFSLSESLKKIELINPKNAILTHMHVDLD 245 +D + + H S + K + H + Sbjct: 201 DVDLTMTRVREANPQMPEARIQMIGAHLADHHLSPEQLGDMARRAGAKRLVAVHFSPGMM 260 Query: 246 YDMVLKSTPSRVVPAFDG 263 + +R+ FDG Sbjct: 261 TPARAREYLARIEAVFDG 278 >gi|229019356|ref|ZP_04176180.1| Ribonuclease Z [Bacillus cereus AH1273] gi|229025602|ref|ZP_04182009.1| Ribonuclease Z [Bacillus cereus AH1272] gi|228735696|gb|EEL86284.1| Ribonuclease Z [Bacillus cereus AH1272] gi|228741924|gb|EEL92100.1| Ribonuclease Z [Bacillus cereus AH1273] Length = 307 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 91/300 (30%), Gaps = 91/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGY--------------------- 98 Q+L V I+ + TH H DHI G+ GL R + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTTLTVYGPKGIKQFIEV 102 Query: 99 -----FLKQKRPIDV---------------YAAPDCMKHLFESFRY-----------CFK 127 K P+++ Y + H E F Y Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 L + P +++ +V + Q GRI ++ G+ YC Sbjct: 163 KLLEMGVKPGPLFKRLKDGEVVELENGTILNGKDFIGPPQKGRIITI---LGDTRYC--- 216 Query: 188 NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 ----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHIS 272 >gi|15614276|ref|NP_242579.1| hypothetical protein BH1713 [Bacillus halodurans C-125] gi|41017582|sp|Q9KC61|RNZ_BACHD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|10174330|dbj|BAB05432.1| BH1713 [Bacillus halodurans C-125] Length = 309 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 110/329 (33%), Gaps = 86/329 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F G G+ GVP I + AC + + +RG + D G Sbjct: 1 MEFHFFGTGS--GVPSIERNVSACA--------------VRFLQQRG--KQWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAP------DC 114 Q+LR + I+ + TH H DHI G+ GL G Q +Y + Sbjct: 43 QHQILRSSIALGKIERIFITHLHGDHIFGLPGLLGSRSFQGGENPLFLYGPKGIRSFVET 102 Query: 115 ----------MKHLFESFR------------------------YCFK-ALDDRTYPPIVN 139 + E F Y FK DDR +V+ Sbjct: 103 ALQVSNTHVKYELTIEEFSEPGLLFHEEGFKVETILLDHVMPCYAFKVTEDDRPGELLVD 162 Query: 140 PIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGF-----RFGNVAYCTDVNAFPAE 193 + + P+ K G +P + R+ + F R + D E Sbjct: 163 RLKAKGVPPGPLYRKIQQGETVELPTGE---RLEANAFLGPPKRGRSFVLAGDTRPV-KE 218 Query: 194 SLEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKIELINPKNAILTHMH---VDL 244 + +N++ LI +D K H H +++++++ + N + ILTH+ D+ Sbjct: 219 LIPFAKNVNVLIHEATFLDDKKGHAHEYGHSTMADAIQLAKQANVDHLILTHISSRYHDM 278 Query: 245 DYDMVLKSTPS---RVVPAFDGMQFSSPI 270 D + K + V A D F P+ Sbjct: 279 S-DELQKKAQNAFANAVVAHDFYVFHLPL 306 >gi|228957463|ref|ZP_04119217.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802217|gb|EEM49080.1| Beta-lactamase domain protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 244 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 73/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ +Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHEPHTKGIAYNPEETLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ + I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGSDIVVYSADSSYIPEF-IPFTKDANLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|254389814|ref|ZP_05005038.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|326441372|ref|ZP_08216106.1| hypothetical protein SclaA2_09909 [Streptomyces clavuligerus ATCC 27064] gi|197703525|gb|EDY49337.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 250 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 74/251 (29%), Gaps = 50/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R + VY Sbjct: 40 LGELQRHIGLYDLDAIFLSHLHADHC--IDMCGYFVARYYRHEGGRCDALPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ I G H + + G Sbjct: 98 RLTTAYA---DTPSPTSMSEVFDFRTLKPGTFDI------GPFSVRAERVAH-PVEAYGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + +AY D E D + +A K + H + E+ E Sbjct: 148 RLEHEGRTLAYSGDT-GVCEPLHELADGADLFLCEASFTYGKEDIPDLHLNGREAGAHAE 206 Query: 229 LINPKNAILTH 239 +LTH Sbjct: 207 RAGAGRLVLTH 217 >gi|149187788|ref|ZP_01866084.1| Arylsulfatase [Vibrio shilonii AK1] gi|148838184|gb|EDL55125.1| Arylsulfatase [Vibrio shilonii AK1] Length = 318 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 96/294 (32%), Gaps = 60/294 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILG G P + R S I + +++D G Sbjct: 33 FTLQILGSGG----PI------------SDDMRASSGELIWWKG----KSRIMIDAGGGN 72 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPD--CMKHL 118 Y++ + + +D + TH H DH+ + L YF +++ +D+ L Sbjct: 73 YLRFGQAGGKLEDLDLLAITHFHTDHVADLPALLKGAYFFEREDALDITGPEAGSAFPSL 132 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV------------IEAIPILQ 166 F + Y + + PI + + + Sbjct: 133 TGYMDAMFNQ-EHGAYAYLNGLYDGSDGLFPITLTDVSYQETTPQKIYELDGLTVYALGI 191 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLH 214 HG + +L +R G + D N + + D L++ DA+ + +H Sbjct: 192 PHGDVPTLAYRIESEDGVIVISADQNGSNPAFIPFAKGADILVMPMAIHEEADAISSFMH 251 Query: 215 SSHFSLSESLKKIELINPKNAILTH-MHVDLDY-----DMVLKSTPSRVVPAFD 262 + ++ E INPK IL H M + L ++V K ++ A D Sbjct: 252 AKPSTVGE---IAAEINPKLLILNHWMGLGLKRKAQSVEIVKKYYKGKIFSARD 302 >gi|68073799|ref|XP_678814.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56499400|emb|CAI00194.1| conserved hypothetical protein [Plasmodium berghei] Length = 862 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 92/263 (34%), Gaps = 61/263 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S +P S I + + ++I+D G Sbjct: 578 SFYFLGTGCS--IPSAF---------------RNVSGIILNIQKD---FSIILDFGERSL 617 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI------DVYA 110 Q+ E + SI + +H HADH GI YFL ++ I + Sbjct: 618 YQLYWISKSWIQFTESIKSIKVIFISHAHADHHVGIY----YFLYIRKMIFPHLDPPLIL 673 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIPILQQH- 168 P +K+ F F ++ R I+ ND+ I + S ++ H Sbjct: 674 IPKTLKNWMNLFNELFLDIEMR--------IIYNENDLEIKEIISEDNLLTLHLFKVNHI 725 Query: 169 ---GRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDA------LKNGLHSSHF 218 I G G++ Y D P + ++ + LI +A L ++ H Sbjct: 726 KESYGIKIEGKDIGSIVYSADTR--PCDNVKKFAKDCNILIHEATFDDELLVEAINKKHS 783 Query: 219 SLSESLKKIELINPKNAILTHMH 241 ++ E+++ +N K ILTH Sbjct: 784 TIHEAMQISLDVNCKTLILTHFS 806 >gi|325479608|gb|EGC82701.1| metallo-beta-lactamase domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 263 Score = 69.0 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 71/232 (30%), Gaps = 55/232 (23%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGID 93 S +++D G ++ L E+V +DA+ TH H DH+ G Sbjct: 14 NCSFI------EHKGVKILIDAGFSGKKIEGLMEKVGEKASDLDAIFLTHEHNDHVQG-- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L ++ I +YA K F R + I+ + Sbjct: 66 ---AGVLSKRFNIPIYANAGTWKG--------FSKKAKR-----LKEENIKIFKTNEFLN 109 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI---- 205 I +PI H G+ F V +D + +++ D Sbjct: 110 FKSMDI--LPIAIHHDANEPCGYVFYLGNKKVTILSDTGLVDEKMAYEIKGSDVYYMEAN 167 Query: 206 --IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMH 241 ++ALK G + H S + + + + + L+H+ Sbjct: 168 HDLEALKIGPYPYNLKLRVMGNMGHLSNDQSAEALADALVGKEEYVFLSHLS 219 >gi|332174608|gb|AEE23862.1| beta-lactamase-like protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 318 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 78/231 (33%), Gaps = 30/231 (12%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ--VLREQVLSIDAVLYTHPHADHIHGI 92 + R SS I + +++D GP + + AVL TH H DH + Sbjct: 59 DDRVSSSYLIWHK----NKARILIDAGPGSSVNFGASGADFTDVQAVLLTHLHVDHSADL 114 Query: 93 DGLR--GYFLKQKRPIDVYAA------PDCMKHLFE------SFRYCFKALDDRTYP-PI 137 YF ++ I VY P +L +F Y DD + Sbjct: 115 PAYVKGSYFTQRNEEITVYGPSANALMPSTSDYLASLMGNEGAFAYLSDYTDDSSQSDYH 174 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 + I + + I I HG ++++ +R + + D++ Sbjct: 175 IKAQNIPLTPIKRHREKLSEDITITAIPVHHGPVAAVAWRVDIGSCGITFSGDMSNKNNV 234 Query: 194 SLEKLQNLDFLII-DALKNGLHSS----HFSLSESLKKIELINPKNAILTH 239 ++ D L++ +A+ + H + K + N K +L+H Sbjct: 235 LATLAKDSDILVMHNAVPQSATGAAINLHMRPLDIGKIAQQANAKRVVLSH 285 >gi|71985808|ref|NP_001023109.1| Homolog Of ELAC2 (cancer susceptibility locus) family member (hoe-1) [Caenorhabditis elegans] gi|42559555|sp|O44476|RNZ_CAEEL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=CeELAC2; AltName: Full=Homolog of ELAC2 protein 1; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|16604142|gb|AAB92042.3| Homolog of elac2 (cancer susceptibility locus) protein 1, isoform a, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 833 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 99/327 (30%), Gaps = 97/327 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G ++ VP R + + N+ +++D G Y Sbjct: 493 KLTFFGTSSA--VPS--------------KYRNVTGYLVEA----SENSAILIDVGEGTY 532 Query: 66 MQVLREQVLS---------IDAVLYTHPHADHIHGIDGL---------------RGYF-- 99 Q+ R ++ VL TH H DH++G+ + R Sbjct: 533 GQM-RAVFGEDGCKQLLVNLNCVLITHAHQDHMNGLYTIIARRKEAFESLGAPYRPLVLV 591 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP-------------------PIV 138 +P+ FE+ + + +D YP P + Sbjct: 592 CNRNVLKPM------KTYSICFENIEHLLEIVDISRYPLTPPGSPGGPPGKRPRLPSPHL 645 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP-AE 193 P D+ ++ + +Q H + GF + + D P Sbjct: 646 PPSRDVLQDMSSSFDKKAWKLDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK--PCDL 703 Query: 194 SLEKLQNLDFLI----------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +E+ ++ D L+ DA++ H ++ +++ + +N K+ ILTH Sbjct: 704 LVEEGKDADVLVHESTFEDGHEADAMRKR----HSTMGQAVDVGKRMNAKHIILTHFSAR 759 Query: 244 LDYDMVLKST--PSRVVPAFDGMQFSS 268 VL + A D ++ Sbjct: 760 YPKVPVLPEYLDKENIGVAMDMLRVRF 786 >gi|237710449|ref|ZP_04540930.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229455171|gb|EEO60892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 267 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 78/227 (34%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G ++ L + I AV TH HADHI + L +K I VY+ Sbjct: 26 ILVDAGIGIRTIKKTLKELGIGLDIIRAVFITHDHADHIKAVGHL-----GEKFGIPVYS 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P+ + + YC + +E D I H Sbjct: 81 TPEVHAGINK--SYCMTEKLSTCVHYLHKGETMELEDFAI-----------TAFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + E + ++L+++A LK G + Sbjct: 128 TDNVGYCINIDGKIFSFLTDLGHITPTAAEYICKANYLVLEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKK-IELINP--KNAILTHMHVDLDYDMVLKST 253 H S E+ E IN K L H+ D ++ + T Sbjct: 188 RIAGPNGHMSNRETADFLAENINENLKYIWLCHLSKDNNHPELAYKT 234 >gi|212693391|ref|ZP_03301519.1| hypothetical protein BACDOR_02904 [Bacteroides dorei DSM 17855] gi|237726956|ref|ZP_04557437.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. D4] gi|265756539|ref|ZP_06090745.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_33FAA] gi|212664035|gb|EEB24609.1| hypothetical protein BACDOR_02904 [Bacteroides dorei DSM 17855] gi|229433812|gb|EEO43889.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides dorei 5_1_36/D4] gi|263233727|gb|EEZ19342.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_33FAA] Length = 267 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 77/227 (33%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G ++ L + I AV TH HADHI + L +K I VY+ Sbjct: 26 ILVDAGIGIRTIKKTLKELGIGLDIIRAVFITHDHADHIKAVGHL-----GEKFGIPVYS 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P+ + + YC + +E D H Sbjct: 81 TPEVHAGINK--SYCMTEKLSTCVHYLHKGETMELED-----------FAITAFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + E + ++L+++A LK G + Sbjct: 128 TDNVGYCINIDGKIFSFLTDLGHITPTAAEYICKANYLVLEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKK-IELINP--KNAILTHMHVDLDYDMVLKST 253 H S E+ E IN K L H+ D ++ + T Sbjct: 188 RIAGPNGHMSNRETADFLAENINESLKYIWLCHLSKDNNHPELAYKT 234 >gi|254428096|ref|ZP_05041803.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] gi|196194265|gb|EDX89224.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] Length = 257 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 71/219 (32%), Gaps = 49/219 (22%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V++D G R + A+L TH H DHI L +K Sbjct: 20 DDTLVLIDCGFTVKETEARLGRLGLATDQLSAILVTHEHGDHI-----RSAGALARKVGC 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY++ F D R + + + G +E +P+L Sbjct: 75 PVYSS----------FGTASAVHDKRATLKGADWQEVRPGRA-----FSLGAMEILPVLV 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +RF V TD+ A ++ + D L+++ L +G + S Sbjct: 120 PHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRECDALVLECNHDPQLLASGPYPS 179 Query: 217 -----------HFSLSESLKKIELINPKN---AILTHMH 241 H S ++ + N +L+H+ Sbjct: 180 SLKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLS 218 >gi|254466560|ref|ZP_05079971.1| coenzyme PQQ biosynthesis protein B [Rhodobacterales bacterium Y4I] gi|206687468|gb|EDZ47950.1| coenzyme PQQ biosynthesis protein B [Rhodobacterales bacterium Y4I] Length = 294 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 101/305 (33%), Gaps = 52/305 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRR----TRSSLKISRVSERGSNTTVIVDT 60 F +LG A G+P+ C + + R T+SSL +S + + +++T Sbjct: 1 MRFLVLGAAAGGGLPQWNCGCRNCR--DARLGRIASATQSSLAVSLDGQNWA----VLNT 54 Query: 61 GPDFYMQV----------LREQVLSIDAVLYTHPHADHIHGIDGLR---GYF-LKQKRPI 106 PD +Q+ LR + AVL T+ DHI G+ LR + + Sbjct: 55 SPDIRVQLQNCPSMHPQSLRH--SPLRAVLLTNGDIDHIAGLLSLREQSPFTLFATVGLL 112 Query: 107 DVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 DV AA L + + + + P + V G V + Sbjct: 113 DVLAANPVFNALPAAVGRHPVRLSEGFELLPGLQAKVFAVPGKVPLYMEGGQVQTDLMGE 172 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------------KN 211 Q G S G + Y + AE LE L + D + D K Sbjct: 173 QTVGVRLSGGTK--TAYYIPGCSGVSAELLEILADADHIFFDGTLWHDQEMIQSGTGAKT 230 Query: 212 GLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDYD-----MVLKSTPSRVVPAFDG 263 GL H S+ S+ + ++ H++ + + A DG Sbjct: 231 GLRMGHISISGPQGSIASLRSVDAAKT-FIHINNTNPVWQPGSAERAQVLAAGWTIAADG 289 Query: 264 MQFSS 268 M+ + Sbjct: 290 MEIAL 294 >gi|307243151|ref|ZP_07525325.1| ribonuclease Z [Peptostreptococcus stomatis DSM 17678] gi|306493511|gb|EFM65490.1| ribonuclease Z [Peptostreptococcus stomatis DSM 17678] Length = 306 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 101/324 (31%), Gaps = 78/324 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T++G G ++ P SS I+ +++D G Sbjct: 2 LNLTMIGTGGNVPTPERFC----------------SSAFINYKG-----RKILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA--------APDC 114 + + + ID +L TH H DHI+G+ GL ++ +Y A Sbjct: 41 QISMKKIGCGFKGIDLILITHLHGDHINGLLGLLSTMGNAEKRSPLYIVGPRGIKRALSA 100 Query: 115 MKHLFESFRYCFKALDDRTYPP-----IVNPIVIENNDVPICMKSAGGVI------EAIP 163 M L+E Y ++ ++ I I + D+ + G + E P Sbjct: 101 MMVLWEGLPYRLVVIEKPVGSFSINSDVLREIEISSLDLDHSTECLGYSLYFKRNREFDP 160 Query: 164 ILQQHGRISSLGFR---------FGNVAYCTDV-----------NAFP-----AESLEKL 198 ++ +R +V+Y D+ + + + Sbjct: 161 DKALENQVPKHLWRHLQAGQTFYMDDVSYTPDMVLGKPRPGIKFSYITDTRPIEAIIPFI 220 Query: 199 QNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL----DYD 247 ++ + +A + + + H + E+ + +LTH L DY Sbjct: 221 KSSRLFVCEAMYGDDLDIGKAVKNKHMTFREAANLAYKGQVDHLLLTHFSPSLDSPGDYI 280 Query: 248 MVLKSTPSRVVPAFDGMQFSSPIP 271 S A+DG+ S P Sbjct: 281 ENATSVFKNTSLAYDGINISIGYP 304 >gi|312128230|ref|YP_003993104.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311778249|gb|ADQ07735.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 265 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 84/241 (34%), Gaps = 59/241 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHI--HGID 93 S+ IS +T++IVD G F Q L E++ IDA+L +H H+DH+ GI Sbjct: 18 SILISY-----KDTSIIVDAGVSFKKLAQAL-EKIGFNKKIDAILLSHDHSDHVKCAGI- 70 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 +K + + + + S D +Y ++ Sbjct: 71 ------YFRKLNVPIITNYKTWESIKSSLG-----KVDESYVKLIET----------GTS 109 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 + G I H +GF F V+ CTDV + D +++++ Sbjct: 110 FSVGSIGIDTFSIPHDASDPMGFCFYVKDKKVSICTDVGHVSDSVAAMIDFSDIILLESN 169 Query: 209 -----LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMV 249 L G + H S ++ K I +N K L H+ + ++ V Sbjct: 170 HDVEMLMFGPYPYHLKQRIKGDKGHLSNEQAAKMILKLNLARTKRIYLGHLSEENNHPDV 229 Query: 250 L 250 Sbjct: 230 A 230 >gi|47568203|ref|ZP_00238907.1| metallo-beta-lactamase, AtsA/ElaC family [Bacillus cereus G9241] gi|47555193|gb|EAL13540.1| metallo-beta-lactamase, AtsA/ElaC family [Bacillus cereus G9241] Length = 307 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 61/178 (34%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + YP ++E + + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGTVFED--NEFHVETKRLSHG-IECFGYRI 150 >gi|116071259|ref|ZP_01468528.1| Ribonuclease Z [Synechococcus sp. BL107] gi|116066664|gb|EAU72421.1| Ribonuclease Z [Synechococcus sp. BL107] Length = 327 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 86/323 (26%), Gaps = 111/323 (34%) Query: 1 MKDY----YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV 56 MKD T LG S GVP R S R+ +R Sbjct: 1 MKDRELTTLQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEM--W 41 Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA 111 + D G Q LR ++ + V TH H DH+ G+ GL G +D+Y Sbjct: 42 LFDCGEGTQHQFLRSELRLSQLRRVFVTHMHGDHVFGLPGLLASLGLAGNSNEGVDLYGP 101 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 +L + R P + + + + + H R+ Sbjct: 102 DPLESYLNG----VLRTSSTRIGYP-LKVHRVHDCAENGTLVYEDDDLMVRCTPLTH-RV 155 Query: 172 SSLGFRFG--------NVA----------------------------------------- 182 + +R ++A Sbjct: 156 PAYAYRVDQKPLAGRFDIAKAKDLQIPPGPIYAQLKQGDTVTLEDGRIIDGTTLCGPERP 215 Query: 183 -----YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSES 223 YCTD F +++ Q D LI H S H + + + Sbjct: 216 GVSVVYCTDTV-FCEAAVDLAQGADLLI--------HESTFAHQESEMAYQKMHSTSTMA 266 Query: 224 LKKIELINPKNAILTHMHVDLDY 246 + N +LTH+ + Sbjct: 267 AQTAAEANVGQLVLTHLSPRYAH 289 >gi|158320712|ref|YP_001513219.1| ribonuclease Z [Alkaliphilus oremlandii OhILAs] gi|166991092|sp|A8MGK0|RNZ_ALKOO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|158140911|gb|ABW19223.1| ribonuclease Z [Alkaliphilus oremlandii OhILAs] Length = 317 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 95/335 (28%), Gaps = 100/335 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P R SSL I+ ++VD G Sbjct: 2 LNVTLLGSG--GGMPMP--------------ERHLSSLMINYKG-----RKILVDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP---DCMKH 117 + + + SID + TH H DHI GI GL +R P+ + D M+ Sbjct: 41 QVAIRKMNAGFKSIDIICITHVHGDHIFGIPGLLSTMGNSQRLDPVTIVGPKGISDVMRG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG--VIEAIPILQQHGRISSLG 175 L S + +++ P I + I + G I + H G Sbjct: 101 LLLSIKQLPYSIEIIEDPKGKLGITNTEQGLKIKEQKDGMNDEITVSTLELDHSA-PCFG 159 Query: 176 F---------------------------------------------------RFGNVAYC 184 + R + Y Sbjct: 160 YSFYLNRRPKFEPEKAIKNDVPRLIWSKLQKGETIVAGDRKYSPDLVLGEQRRGIKLTYI 219 Query: 185 TD---VNAFPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKN 234 TD P + D I D + + + H + E+ + + K Sbjct: 220 TDTRPTKDIPQ----WINQSDLFICEGTYGDNDDMDKAIKNKHMTFMEAGELAKKGKVKE 275 Query: 235 AILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQ 265 +LTH L Y+ K + +DG + Sbjct: 276 LLLTHFSPALKEPNFYEHNAKKEFAHTTIGYDGYR 310 >gi|150005583|ref|YP_001300327.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides vulgatus ATCC 8482] gi|254884502|ref|ZP_05257212.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 4_3_47FAA] gi|319640806|ref|ZP_07995519.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_40A] gi|149934007|gb|ABR40705.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides vulgatus ATCC 8482] gi|254837295|gb|EET17604.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 4_3_47FAA] gi|317387618|gb|EFV68484.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 3_1_40A] Length = 267 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 77/227 (33%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G ++ L + I AV TH HADHI + L +K I VY+ Sbjct: 26 ILVDAGIGIRTIKKTLKELGIGLDIIRAVFITHDHADHIKAVGHL-----GEKFGIPVYS 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P+ + + YC + +E D H Sbjct: 81 TPEVHAGINK--SYCMTEKLSTCVHYLHKGETMELED-----------FTITAFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + E + ++L+++A LK G + Sbjct: 128 TDNVGYCMNIDGKIFSFLTDLGHITPTAAEYICKANYLVLEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKK-IELINP--KNAILTHMHVDLDYDMVLKST 253 H S E+ E IN K L H+ D ++ + T Sbjct: 188 RIAGPNGHMSNRETADFLAENINESLKYIWLCHLSKDNNHPELAYKT 234 >gi|291299062|ref|YP_003510340.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290568282|gb|ADD41247.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 252 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 82/252 (32%), Gaps = 49/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + T+++D G Sbjct: 1 MKLTVIGCAGS--FPGPDSPC--------------SSYLVEA-----DGYTLLLDFGSGS 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKH 117 + R +DA+L TH HADHI D +++ P + +Y + Sbjct: 40 LGALQRHTDPYKLDAILLTHLHADHIM--DACPYVVMRRYAPGAPFPQVPLYGPEGTERR 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + P ++ + + P G ++ H I + G R Sbjct: 98 LAAA-----YGGAGEAACPSLSDVYDVHTLQPSTFNM--GPLKVTVDKVCH-PIETYGVR 149 Query: 178 FGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 + + Y +D E LE+L + D + +A + H + E+ + Sbjct: 150 IEHDGRTLVYSSDTGQC--EVLERLAKKGDVFLCEASYLEGRPNPPGVHLTGREAGECAT 207 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 208 KADVGRLLLTHL 219 >gi|217965612|ref|YP_002351290.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|290892557|ref|ZP_06555550.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|217334882|gb|ACK40676.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|290557866|gb|EFD91387.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|307569839|emb|CAR83018.1| metallo-beta-lactamase family protein [Listeria monocytogenes L99] Length = 276 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 79/281 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + I + + + G ++ H I + Sbjct: 98 KAMDNM---------------IGEVSSDQKFQFDMETVKSFGSMQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD + D +L ++ L+ G + Sbjct: 143 YIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + ++ E+I K L H+ D + + + Sbjct: 203 EGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARM 243 >gi|325919973|ref|ZP_08181957.1| metal-dependent hydrolase, beta-lactamase superfamily III [Xanthomonas gardneri ATCC 19865] gi|325549548|gb|EGD20418.1| metal-dependent hydrolase, beta-lactamase superfamily III [Xanthomonas gardneri ATCC 19865] Length = 323 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 75/248 (30%), Gaps = 43/248 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + ++ + TH H+DH + + + P+ Sbjct: 72 DGQPYLIDCGNGVAQQLAKAGIRLPTLRDIFLTHHHSDHNADLLNVVWLAWASGLQTPVH 131 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F ++ + PP I + D P + Sbjct: 132 LYGLPG-----IARMVDAFVEMNAIDIDARIREEGRPPFKQLIKVHEFDQPGTV-LQNDQ 185 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI-----IDA 208 + L H + + +RF V + D PA + E ++ D L+ + A Sbjct: 186 VTVTATLVDHYTLKPAFAYRFAARDRTVVFSGDTRYLPALA-EFAKDADILVHEVMYLPA 244 Query: 209 LKN-------------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L+ L SH + E K N K +L H D + Sbjct: 245 LEKMLKTNDNAPTLLDHLLKSHSTSEEVGKIAAAANAKMLLLNHFVPGGDPAITDAMWSE 304 Query: 256 RVVPAFDG 263 + G Sbjct: 305 GARKHYAG 312 >gi|87301204|ref|ZP_01084045.1| Ribonuclease Z [Synechococcus sp. WH 5701] gi|87284172|gb|EAQ76125.1| Ribonuclease Z [Synechococcus sp. WH 5701] Length = 320 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 82/295 (27%), Gaps = 78/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RSRNVSAVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLF- 119 Q LR +V + + TH H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSELRVSQLRRIFITHMHGDHVFGLPGLLASLGLAGACSGVDLYGPDPLRDYLEG 101 Query: 120 ------ESFRYCFKALDDRTYPP---------------IVNPIVIENNDVPICMKSAGGV 158 Y + I + K G Sbjct: 102 VLRTSSTRIGYPLRTHRVHKAAHSGAVLLDDDDLVVRCTPLTHRIPAYAYRVEQKPRAGR 161 Query: 159 IEAI----------PI--LQQHGRISSL--GFRF------------GNVAYCTDVNAFPA 192 + P+ + GR L G +V YCTD F Sbjct: 162 FDIEKARELGIPPGPVYAELKAGRDVCLDDGRIIRGETLCGPDRPGASVVYCTDTV-FSE 220 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++E + D LI ++ + H + + + + L K +LTH+ Sbjct: 221 AAVELARGADLLIHESTFAHSEAEMAFQRQHSTSTMAAQTAALAGVKQLVLTHLS 275 >gi|255018251|ref|ZP_05290377.1| hypothetical protein LmonF_12051 [Listeria monocytogenes FSL F2-515] Length = 262 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIEPGVIFEDKMFIVTADDLDHG-VRSFGYRI 149 >gi|150019869|ref|YP_001312123.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149906334|gb|ABR37167.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 263 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 82/240 (34%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D +Q + E ++ + TH H+DHI G+ L +K I Sbjct: 20 NKAKILIDAGLPGKKIDLALQEINENPKDLNGIFITHEHSDHIKGVG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA D + + + I+ D + I+A I Sbjct: 75 PIYANADTWSAM-------------ESLIGNIKEHNIKVIDKRSFTEIEDMSIKAFNIP- 120 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H + +G+ +++ TD F E + +++ + +++ + LK G + Sbjct: 121 -HDAAAPMGYTVSSGEKSISVATDFGTFTREIYDNIKDSEVILLESNHDVNMLKFGPYPY 179 Query: 216 ----------SHFSLSESLKKIELI----NPKNAILTHMHV-----DLDYDMVLKSTPSR 256 H S + I + K IL H+ DL Y VL Sbjct: 180 PLKRRILSEIGHLSNDDCGSAIVELYKGSTKKKIILGHLSNTNNQPDLAYQTVLNVLNEN 239 >gi|315646598|ref|ZP_07899716.1| ribonuclease Z [Paenibacillus vortex V453] gi|315278241|gb|EFU41561.1| ribonuclease Z [Paenibacillus vortex V453] Length = 309 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 99/299 (33%), Gaps = 77/299 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP + +R +S+ + + ER + + D G Sbjct: 1 MELYFLGTNA--GVPTL--------------QRNVTSIALRLLEER--RSLWLFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAP-------- 112 Q+L+ ++ ++ V TH H DHI G+ GL Q + +Y P Sbjct: 43 QHQILKSPLKLSKLEKVFITHMHGDHIFGLPGLLSSRGAQGVTLPLAIYGPPGIKSFIET 102 Query: 113 ----------DCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVP-----IC 151 M+ + + F+ R ++ IE D+P Sbjct: 103 TLNISQSRVPYTMEIMEHTGGVLFEDDSFRVEAAKLDHRAESYGYRIEEKDLPGSLDLKR 162 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES--------------LEK 197 +++ G + + G LG G + +DV P + +E Sbjct: 163 LEAYGLKPGPLYGKLKRGESVDLG--GGRWIHASDVLLTPKKGRVVTILGDTRPCPGVES 220 Query: 198 L-QNLDFLI-----IDALKNGLH-SSHFSLSESLKKIELINPKNAILTHMH---VDLDY 246 L + D L+ +D L H H + ++ + E K LTH D+++ Sbjct: 221 LSKGADLLVHEATFMDDLTELAHEYYHSTAKQAAEAAERAGVKTLFLTHFSSRYKDIEH 279 >gi|228987335|ref|ZP_04147455.1| Ribonuclease Z [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157725|ref|ZP_04285800.1| Ribonuclease Z [Bacillus cereus ATCC 4342] gi|228625682|gb|EEK82434.1| Ribonuclease Z [Bacillus cereus ATCC 4342] gi|228772307|gb|EEM20753.1| Ribonuclease Z [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 307 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 61/178 (34%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + YP ++E + + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGTVFED--NEFHVETKRLSHG-IECFGYRI 150 >gi|121603643|ref|YP_980972.1| pyrroloquinoline quinone biosynthesis protein PqqB [Polaromonas naphthalenivorans CJ2] gi|120592612|gb|ABM36051.1| coenzyme PQQ biosynthesis protein B [Polaromonas naphthalenivorans CJ2] Length = 305 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 96/316 (30%), Gaps = 67/316 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + CD RT+SS+ ++ ++V+ Sbjct: 1 MRIRVLGSSAGGGFPQWNCNCPNCDGLRRGSIRAQARTQSSIAVTVDGTDW----LLVNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AVL DH+ G+ LR +++ P+ + A Sbjct: 57 SPDVLTQIRAAPELQPARAQRDSGIAAVLLMDAQIDHVTGLLMLR----ERQSPLPLLAT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI------PIL 165 P+ + L E F Y + + + D + G I + P Sbjct: 113 PEVLGDLTEGFP---ITRILSHYCGVTPTPLRLDGDFMAVPELPGMAIRPVLLSSKPPPY 169 Query: 166 QQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIID-------- 207 G G V Y + L+ + +++D Sbjct: 170 SPFRNCPRPGDNIGLLLENPATGQRVFYAPGLGEMTPALLDLMAQCSVVLVDGTFWTEDE 229 Query: 208 ----ALKNGLHSSHFSLSES--LKKIELI----NPKNAILTHMHVDLDYDMVLKSTPS-- 255 L + L +S I + IL H++ ++ + +P Sbjct: 230 MQRLGLSKKSAAEMGHLPQSGPQGMIAQLDTLPAATRKILIHINNTNP--ILREDSPERA 287 Query: 256 -----RVVPAFDGMQF 266 + AFDGM Sbjct: 288 LLTAHGIEVAFDGMDI 303 >gi|85680314|gb|ABC72344.1| signal-transducing histidine kinase [uncultured haloarchaeon] Length = 201 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 27/206 (13%) Query: 22 TGDWGACDPTNP--KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV 79 C+ KNR ++L + E S T ++D PD Q+ +D V Sbjct: 2 GCSCELCESARKNCKNRMYVAALMLKECGEEYS-TRYLIDATPDIRYQI---GGGMLDGV 57 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLFESFRY----------CF 126 +H H HI G+ +F ++ D VY D +++ + + Sbjct: 58 FLSHGHLGHIAGL----PFFSRESMDTDNLSVYCTADMKEYIMNNEPFKLLAERGHIRLH 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VA 182 + D I + S G +E + + ++ F + Sbjct: 114 ETRDGERIKIISKSKSKSESGSGSGSGSGSGSVEFRQVAHRCLNTDTVSFMIRGSKRTLY 173 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA 208 Y +D++ + +L+ ++ D I+D Sbjct: 174 YLSDIDEWTENALDNVRAADIAIVDG 199 >gi|29346232|ref|NP_809735.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|253568335|ref|ZP_04845746.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 1_1_6] gi|298385610|ref|ZP_06995168.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 1_1_14] gi|29338127|gb|AAO75929.1| putative metallo-beta-lactamase superfamily hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|251842408|gb|EES70488.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 1_1_6] gi|298261751|gb|EFI04617.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 1_1_14] Length = 267 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 51/229 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKTLKDFNILMESIRAVFVTHDHADHIKAVGHL-----GEKMNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + YC + + VP+ ++ H Sbjct: 81 TARIHEGINR--SYCMTEKLSTSVRYL-------EKQVPMMLE----DFRIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + + ++LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAADYISKANYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S S + + + E + + L H+ D ++ + T Sbjct: 188 RIMSRTGHMSNSATAEFLAENITEHL--RYIWLCHLSKDNNHPELAYKT 234 >gi|42783256|ref|NP_980503.1| ribonuclease Z [Bacillus cereus ATCC 10987] gi|206976331|ref|ZP_03237239.1| ribonuclease Z [Bacillus cereus H3081.97] gi|217961634|ref|YP_002340204.1| ribonuclease Z [Bacillus cereus AH187] gi|222097590|ref|YP_002531647.1| ribonuclease z [Bacillus cereus Q1] gi|229140877|ref|ZP_04269422.1| Ribonuclease Z [Bacillus cereus BDRD-ST26] gi|56749438|sp|Q731F6|RNZ_BACC1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808611|sp|B7HNQ7|RNZ_BACC7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808612|sp|B9IXD7|RNZ_BACCQ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|42739184|gb|AAS43111.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206745527|gb|EDZ56926.1| ribonuclease Z [Bacillus cereus H3081.97] gi|217065116|gb|ACJ79366.1| ribonuclease Z [Bacillus cereus AH187] gi|221241648|gb|ACM14358.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|228642667|gb|EEK98953.1| Ribonuclease Z [Bacillus cereus BDRD-ST26] Length = 307 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 61/178 (34%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + YP ++E + + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGTVFED--NEFHVETKRLSHG-IECFGYRI 150 >gi|303244817|ref|ZP_07331146.1| ribonuclease Z [Methanothermococcus okinawensis IH1] gi|302484858|gb|EFL47793.1| ribonuclease Z [Methanothermococcus okinawensis IH1] Length = 314 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 92/301 (30%), Gaps = 85/301 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA+ VP KN R SS+ + E ++ D G Sbjct: 1 MKIVFLGTGAA--VPT-------------KN-RNHSSIGLKFDGEI-----LLFDCGEGA 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++ + I+ + TH H DHI G+ GL R PI++Y P+ + + Sbjct: 40 QRQMIYTDISPMKINNIFITHLHGDHILGLPGLLQSIGFNGRTEPINIYGPPETKETIEN 99 Query: 121 --SFRY---------------------------CFKALDDRTYPPIVNPIVIENNDVPIC 151 Y + + + P + + Sbjct: 100 ILKIGYHSINFNIKVYELSTKNPMKIKDTEKYEIYSYPMNHSVPTVGYIFREKKKPQLNL 159 Query: 152 MKSAGGVIEA----------IPILQQHGRI---------SSLGFRFGNVAYCTDVNAFPA 192 K+ +E PI ++G+I G G Y D Sbjct: 160 KKAIELGVEVGPNLKRLKDGYPIKIKNGKIIYPEDVLLPPKKGICIG---YSGDTTPL-E 215 Query: 193 ESLEKLQ--NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDL 244 + E L+ + LI +A + H ++ +++ ++ ILTH+ Sbjct: 216 DFGEFLKSLGCNILIHEATFDSSKKDNALETMHSTIGDAVNIAKIAGVTELILTHISARY 275 Query: 245 D 245 D Sbjct: 276 D 276 >gi|124009422|ref|ZP_01694099.1| ribonuclease Z [Microscilla marina ATCC 23134] gi|123984970|gb|EAY24928.1| ribonuclease Z [Microscilla marina ATCC 23134] Length = 315 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 29/179 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 + TILG GA+L P I P RR +S +S +T +++D G Sbjct: 2 FQVTILGSGAAL--PVIA----------PDFRRYPTSQIVSLP-----HTHLLIDCGEGT 44 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q L+ ++ I + +H H DH G+ GL KR + +Y P + + Sbjct: 45 QMRLQELKIRINRIKHIFISHLHGDHYLGLIGLLSSMHLNKRNQDLYLYGPPGLAEIISV 104 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +Y + ++ ++ + M I IP+ RI GF Sbjct: 105 QLKY-----SQTRFNYKIHFKELKVGESEEIMSDGMFTIRTIPLSH---RIPCNGFLIQ 155 >gi|147919854|ref|YP_686395.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] gi|110621791|emb|CAJ37069.1| putative metallo-beta-lactamase [uncultured methanogenic archaeon RC-I] Length = 268 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 40/240 (16%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRP 105 + ++VD GP L + ++D ++ +H H DH + I+ + G + + Sbjct: 31 AGKNILVDPGPGSLMRSVELGLKPANLDCIVLSHKHIDHSNDVNIMIEAMSGGSFRPRGI 90 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + A D ++ Y I+ + G IE + Sbjct: 91 L--LAPSDALEG---------DDPVVLRYVRTYIRNNIKVLEPGFKYSLDGVGIEV-AVR 138 Query: 166 QQHGRISSLGFRF----GNVAYCTDV---NAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 H + S G +F + Y TD N P + D+LI++ ++ H + Sbjct: 139 MMHANVESYGLKFTFDGKTLGYITDTKYFNGLPEA----FKGCDYLIVNMVRMT-HDARF 193 Query: 217 -HFSLSESLKKIELINPKNAILTHMHVDL-----D--YDMVLKSTPSRVVPAFDGMQFSS 268 H + ++ +++ P+ IL H + + D + K + R + DGMQFS Sbjct: 194 EHLLPEDVIRILKVAKPRQVILNHFGMQVVKARPDAVARRIEKESRVRTIAGADGMQFSF 253 >gi|313634981|gb|EFS01366.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL N1-067] Length = 276 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 79/249 (31%), Gaps = 56/249 (22%) Query: 39 RSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + +++D G + QV R + +DA+L TH H+D Sbjct: 16 RFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGR-DMSDLDAILITHEHSD 74 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ L +K + +YA + + I + Sbjct: 75 HIKGLG-----VLARKYKLPIYANAKTWQAMDNM---------------IGEVSSDQKFQ 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD- 202 + + G ++ H I + + F TD + D Sbjct: 115 FDMETVKSFGSLQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADA 174 Query: 203 FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 +L ++ L+ G + H S + ++ E+I K L H+ D Sbjct: 175 YLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKD 234 Query: 244 LDYDMVLKS 252 + + + Sbjct: 235 NNMKELARM 243 >gi|261335993|emb|CBH09273.1| putative zinc phosphodiesterase [Heliconius melpomene] Length = 928 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 60/302 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+Y +G G+ C P+ +N +S + +SE ++++D G Sbjct: 562 KEYPKVVFMGTGS-------------CIPSKTRN----TSGIVVHISED---RSMLLDCG 601 Query: 62 PDFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI------- 106 + Q++R + ++ A+ +H HADH G+ G+ I Sbjct: 602 EGTFGQLVRFYGPKKVNSFLRTLKAIYVSHLHADHHIGLIGVLQARHDAFAEINPEGPTP 661 Query: 107 DVYAAPDCMKHLFES-FRYCFKAL-DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +Y + S + F+ + ++ P N + + +D+ + S GV Sbjct: 662 PLYLLAPGQIVTWLSIYHQLFEKIREEFVLVPNQNLLKNKQSDLSSAILSEIGVQSITTC 721 Query: 165 LQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH---- 214 H ++ G +V Y D P + L + ++ LI +A Sbjct: 722 QVAHCP-NAFGVTVSLDHDHSVTYSGDT--IPCDELVVIGKDSTLLIHEATMEDELADEA 778 Query: 215 --SSHFSLSESLKKIELINPKNAILTHMHV------DLDYDMVLKSTPSRVVPAFDGMQF 266 H + S+++ + +N K +LTH L ++ + + V AFD MQ Sbjct: 779 RTKMHSTTSQAINIGKKMNAKYTVLTHFSQRYARLPRLSAHILNDN--NSVGIAFDNMQI 836 Query: 267 SS 268 + Sbjct: 837 TM 838 >gi|240103139|ref|YP_002959448.1| ribonuclease Z [Thermococcus gammatolerans EJ3] gi|259494146|sp|C5A5S2|RNZ_THEGJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|239910693|gb|ACS33584.1| Ribonuclease Z [Thermococcus gammatolerans EJ3] Length = 314 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 37/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G G+ PT +N + ++ R ++ D G Sbjct: 2 LQVIFLGSG---GI----------MPTRERN--------VPAIALRYKGEIILFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ ++ + TH H DH G+ GL +++P+ +Y + + + Sbjct: 41 IRQMNSAKLSPMRVEKIFITHFHGDHYLGLGGLIQTMNLWNREKPLHIYGPKYTFEFV-Q 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +F L+ + P V E + + K E +HG I +LG+ F Sbjct: 100 NF------LNSGFFRPGFEVHVHELGETRLKFKDY----EIWSFKVEHG-IPALGYVFK 147 >gi|119474898|ref|ZP_01615251.1| pyrroloquinoline quinone biosynthesis protein PqqB [marine gamma proteobacterium HTCC2143] gi|119451101|gb|EAW32334.1| pyrroloquinoline quinone biosynthesis protein PqqB [marine gamma proteobacterium HTCC2143] Length = 310 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 98/320 (30%), Gaps = 74/320 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN------RRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C +N RT+SS+ IS E V+ +T P Sbjct: 5 VLGSAAGGGFPQWNCNCANC--AGLRNGSISAQARTQSSIAISSDGENW----VLFNTSP 58 Query: 63 DFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ L I A++ DH G+ L++ P +VY + Sbjct: 59 DIRAQLAAFPPLQPARNLRDTGITAIILMDSQIDHTTGM-----LMLREGCPHNVYCSDM 113 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-------GVIEAIPI-- 164 ++ L F F+ L + +N I+ N + A+PI Sbjct: 114 VLEDLSTGFP-LFEMLKH--WNGGLNHHPIQLNKDDYSEAGSFSIPGIDKLRFHAVPIKS 170 Query: 165 ----LQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 H S +G + Y + + ++ D L++D Sbjct: 171 KAPPYSPHRHDSHVGDTIAMCIEDEVSGKTLFYAPGLGDPEPHIIALMEEADCLLVDGTF 230 Query: 211 NGLHSSHF------------SLSES-----LKKIELINPKNAILTHMHVDL-----DYDM 248 F L +S + + + +L H++ D Sbjct: 231 WREDEMAFSGVGTKLAADMGHLPQSGDAGMISLLRDMQKPRKVLIHINNTNPILVEDSSE 290 Query: 249 VLKSTPSRVVPAFDGMQFSS 268 K + AFDGM Sbjct: 291 RAKLDQEGIEVAFDGMDIEL 310 >gi|110833639|ref|YP_692498.1| metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] gi|110646750|emb|CAL16226.1| metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] Length = 257 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 72/219 (32%), Gaps = 49/219 (22%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V+VD G +R + A+L TH H DHI L +K Sbjct: 20 DDTLVLVDCGFTIKETEVRLGQLGLVADQLSAILVTHEHGDHI-----RSAGALARKVGC 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY++ F D R N I G +E +P+L Sbjct: 75 PVYSS----------FGTASAVHDKRASLKEANWQEIRPGR-----TFTLGAMEVLPVLV 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +RF V TD+ A ++ ++ D L+++ L +G + + Sbjct: 120 PHDAREPCQYRFSWQQRTVGVLTDLGAITPHVVDAYRDCDALVLECNHDSQLLASGPYPA 179 Query: 217 -----------HFSLSESLKKIELINPKN---AILTHMH 241 H S ++ + N +L+H+ Sbjct: 180 SLKRRVGGMLGHLSNDQAAALLRQANVDRLQHLVLSHLS 218 >gi|186471267|ref|YP_001862585.1| coenzyme PQQ biosynthesis protein B [Burkholderia phymatum STM815] gi|184197576|gb|ACC75539.1| coenzyme PQQ biosynthesis protein B [Burkholderia phymatum STM815] Length = 306 Score = 68.6 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 101/317 (31%), Gaps = 72/317 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + CD RRT+SS+ +S ++V+ PD Sbjct: 5 VLGSSAGGGFPQWNCNCRNCDGVRKGTLAAQRRTQSSIAVSVDGVAW----LLVNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + I AVL DH+ G+ LR + P+ +YA Sbjct: 61 LAQIAANPEMQPARHTRDTGIAAVLLMDAQIDHVTGLLMLR----ENSAPLPLYATDAVW 116 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPI------LQQH 168 + L F L V +I+ + P + G IEA+P+ H Sbjct: 117 QDLSTGFP-IVSILSHYCG---VERRLIDLDAGPCEIAALPGVRIEALPLSSKAPPYSPH 172 Query: 169 GRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 G G V Y + + +++ D L++D Sbjct: 173 RAAPQRGDNIGLLITAPGSGKRVFYAPGLGVLEPPVRDAMRSADLLLVDGTVWTSDEMIA 232 Query: 210 -----KNGLHSSHF------SLSESLKKIELINPKNAILTHMHV-------DLDYDMVLK 251 K H + E L ++ N + +L H++ D VL Sbjct: 233 LGLSKKTAADMGHLAQTGPGGMIEVLDSLDRPN-QRKVLIHINNTNPILIDDGPERRVLA 291 Query: 252 STPSRVVPAFDGMQFSS 268 + A DGM F Sbjct: 292 Q--HGIEVAHDGMLFQL 306 >gi|71985814|ref|NP_001023110.1| Homolog Of ELAC2 (cancer susceptibility locus) family member (hoe-1) [Caenorhabditis elegans] gi|47270763|gb|AAT27250.1| Homolog of elac2 (cancer susceptibility locus) protein 1, isoform b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 760 Score = 68.6 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 99/327 (30%), Gaps = 97/327 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G ++ VP R + + N+ +++D G Y Sbjct: 420 KLTFFGTSSA--VPS--------------KYRNVTGYLVEA----SENSAILIDVGEGTY 459 Query: 66 MQVLREQVLS---------IDAVLYTHPHADHIHGIDGL---------------RGYF-- 99 Q+ R ++ VL TH H DH++G+ + R Sbjct: 460 GQM-RAVFGEDGCKQLLVNLNCVLITHAHQDHMNGLYTIIARRKEAFESLGAPYRPLVLV 518 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP-------------------PIV 138 +P+ FE+ + + +D YP P + Sbjct: 519 CNRNVLKPM------KTYSICFENIEHLLEIVDISRYPLTPPGSPGGPPGKRPRLPSPHL 572 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP-AE 193 P D+ ++ + +Q H + GF + + D P Sbjct: 573 PPSRDVLQDMSSSFDKKAWKLDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK--PCDL 630 Query: 194 SLEKLQNLDFLI----------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +E+ ++ D L+ DA++ H ++ +++ + +N K+ ILTH Sbjct: 631 LVEEGKDADVLVHESTFEDGHEADAMRKR----HSTMGQAVDVGKRMNAKHIILTHFSAR 686 Query: 244 LDYDMVLKST--PSRVVPAFDGMQFSS 268 VL + A D ++ Sbjct: 687 YPKVPVLPEYLDKENIGVAMDMLRVRF 713 >gi|113475533|ref|YP_721594.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101] gi|110166581|gb|ABG51121.1| beta-lactamase-like [Trichodesmium erythraeum IMS101] Length = 305 Score = 68.6 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 81/252 (32%), Gaps = 36/252 (14%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R +I D G + Q L + +L+TH H DHI G F+K Sbjct: 39 RVGGHRLIFDGGTGLRVLGQSLISHMPVDAHMLFTHTHWDHIQGFPFFAPAFVKN-NRFH 97 Query: 108 VYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + P + ++ D+ + L Sbjct: 98 IYGPVAPNGATIQQRLNDQMLNPN-FPVPLQIMGAELKFFDLETGRSIKIDDVLIENALL 156 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDALKN-GLHSS- 216 H ++G+R + AY +D FP L ++ D LI DA + S Sbjct: 157 NHPG-EAVGYRVNWQGYSAAYVSDTEHFPDRLDENVLFLARHADVLIYDATYTDEEYYSK 215 Query: 217 --------HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVLKSTPSRVVP 259 H + E++K + K ++ H D + + V + P + Sbjct: 216 KSSKIGWGHSTWQEAIKIAKTAQVKKLVI--FHHDPLHNDDFLDNVGEKVAEKFP-NSLM 272 Query: 260 AFDGMQFSSPIP 271 A +G+ P Sbjct: 273 AREGLSIQLIPP 284 >gi|183230744|ref|XP_656488.2| metallo-beta-lactamase domain-containing protein [Entamoeba histolytica HM-1:IMSS] gi|169802775|gb|EAL51133.2| metallo-beta-lactamase domain-containing protein [Entamoeba histolytica HM-1:IMSS] Length = 257 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 26/221 (11%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGID 93 R +S I + +++D G +++ + I+ VL TH H+DH+ GI Sbjct: 17 YRNTTSNLIEMQ----NGRFILIDCGDGILNTIIKLGINVKRIELVLITHLHSDHVSGI- 71 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + F DVY L E+F+ K+ + + + I D + Sbjct: 72 -IALLFNWILNDCDVYLPEG-GDDLIETFKRISKSSINES----IRIHQIPKGDHDKIIT 125 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + I H I S GF F + V D + +L L + L+ + Sbjct: 126 LSSG-VSVGCIEIPH-EIESHGFVFKDQRGLVVCVLGDTSG---RNLNFLYKVHVLVHEC 180 Query: 209 LKNGLHS---SHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + + + E + +L H V + Sbjct: 181 TFGSSSEIKWGHSNCKIAAQCAESVYADYLLLNHFSVRFKH 221 >gi|152976548|ref|YP_001376065.1| ribonuclease Z [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189043779|sp|A7GSG2|RNZ_BACCN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|152025300|gb|ABS23070.1| ribonuclease Z [Bacillus cytotoxicus NVH 391-98] Length = 307 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 93/301 (30%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERGG--TWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA--------- 111 Q+L V I+ + TH H DHI G+ GL G Q P+ VY Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIEQFIEV 102 Query: 112 ----------------PDCMKHL-----------------FESFRYCFKALDDRTYPPIV 138 + + E F Y D + + Sbjct: 103 ALSVSTTHVKYPLEIVEITEEGIVFEDKQFYVETKRLSHGIECFGYRIVEKDIQGPLLVE 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 PI + G I + I Q+ GRI ++ G+ YC D Sbjct: 163 KLREANVKPGPIFKRLKDGEIVELEDGRVLDGKDFIGPPQK-GRIITI---LGDTRYC-D 217 Query: 187 VNAFPAESLEKLQNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNAILTHM 240 + Q+ D L+ +A + H H + ++ + N K ILTH+ Sbjct: 218 ASRI------LAQDADVLVHEATFAAADQTQAHDYFHSTTEQAARIALEANVKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|254514777|ref|ZP_05126838.1| arylsulfatase [gamma proteobacterium NOR5-3] gi|219677020|gb|EED33385.1| arylsulfatase [gamma proteobacterium NOR5-3] Length = 306 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 88/252 (34%), Gaps = 48/252 (19%) Query: 57 IVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP 112 +VD G Q+++ + I + +H H DH G+ L G L + + +Y P Sbjct: 47 LVDAGDGAGAQLVKAGYRLPQIKGIFLSHLHFDHTGGMLALLGQRMQLNARNKLSIYGPP 106 Query: 113 DCMKHLFESFRYCFKALDDRTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + Y P +E ++ + + I H + Sbjct: 107 GTKAFIDGLLA-AMEGPREAAYGMPRQEWSANVEVQELVHGVVVELDGVSVISAENSHFK 165 Query: 171 IS----------SLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLII--------- 206 I +L FRF ++ Y D P+E++E+L + D L+I Sbjct: 166 IPEASGAPEKAKALSFRFDLEDRSIVYTGDTG--PSEAVEELAKGADLLVIEMMDIPAVL 223 Query: 207 --------DALK------NGLHSSHFSLS-ESLKKIELINPKNAILTHMHVDLDYDMVLK 251 DA K +H L + + + K ++THM ++ + + + Sbjct: 224 ANVRAHNPDAPKKMMDGIEWHFRAHHLLPIQVGEMGAGADAKRLVVTHMVPNITDEAMAQ 283 Query: 252 STPSRVVPAFDG 263 S + AF G Sbjct: 284 RYTSEIAKAFKG 295 >gi|148642552|ref|YP_001273065.1| ribonuclease Z [Methanobrevibacter smithii ATCC 35061] gi|148551569|gb|ABQ86697.1| ribonuclease Z (zinc-dependent), beta-lactamase superfamily, ElaC [Methanobrevibacter smithii ATCC 35061] Length = 300 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 91/328 (27%), Gaps = 95/328 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG +++ R + + E ++ D G Sbjct: 1 MEITFLGTSSAV----------------HSYTRNHPGIILKAFGE-----VMLFDCGEST 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP-------- 112 Q++ ++ I + +H H DHI G+ GL F +++P+ +Y Sbjct: 40 QRQLIYAKISPMKISKIFISHYHGDHILGLPGLLQSLNFRGREKPLTIYGPKGLKKVENA 99 Query: 113 -DCMKHLFESFR----------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + F Y K+ + + + E A Sbjct: 100 IYSLGYCKFDFPIEFIEISSGTILETDEYILKSQEVMHNVTNLAYSIEEKKKPRFLRNKA 159 Query: 156 ---GGVIEAIPILQQHG-RISSLGFRFG------------NVAYCTDVNAFP-AESLEKL 198 G + + +G + G + Y D P E +E Sbjct: 160 IELGVPVGPLFGKLHNGEEVEVNGKIIKPEQVLGDARKGIKITYSGDTR--PCEEMIEFA 217 Query: 199 QNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINPKNAILTHMHVDL 244 +N LI H S H + ++ + N K +LTH+ Sbjct: 218 KNSTLLI--------HESTYTLEDDDKARENFHSTSQDAATIAKCSNTKRLVLTHISTRY 269 Query: 245 -DYDMVLKSTP---SRVVPAFDGMQFSS 268 D + +LK V A D M Sbjct: 270 TDTEDLLKEAKKVFENVEVADDLMTIEI 297 >gi|323140448|ref|ZP_08075376.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] gi|322415016|gb|EFY05807.1| metallo-beta-lactamase domain protein [Phascolarctobacterium sp. YIT 12067] Length = 271 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 76/242 (31%), Gaps = 62/242 (25%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLR 96 IS +R +VD G R + V +D V TH H DH+ G+ Sbjct: 19 ALISTAKQR-----FLVDIGISCRALTTRMKEIGVSVNELDGVFITHEHVDHVRGL---- 69 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + VY++ + + A D +I+NN + Sbjct: 70 -ATFLKNYQVPVYSSVLTWRAIL--------AKDSSLVRQNC--RLIDNN------RLLC 112 Query: 157 GVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 G +E H + G+ F Y TD E + L+++A Sbjct: 113 GDLEVQSFSIPHDAVDPHGYTFTSRSNGSKCTYLTDAGFVTDTIREAVAGSSALVLEANH 172 Query: 209 ----LKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVD--LDYDMVLKSTPSRVVP 259 LKNG + H K IL+ H+ D + L+ P +V Sbjct: 173 DVEMLKNGPYPRHL--------------KQRILSTLGHLSNDTAGHFLTELERLPEHIVL 218 Query: 260 AF 261 A Sbjct: 219 AH 220 >gi|324328047|gb|ADY23307.1| ribonuclease Z [Bacillus thuringiensis serovar finitimus YBT-020] Length = 307 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 61/178 (34%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI G+ GL G Q P+ VY + + Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + YP ++E + + HG I G+R Sbjct: 103 ALS---VSTTHVKYP----LEIVEITEEGTVFED--NEFHVETKRLSHG-IECFGYRI 150 >gi|222153805|ref|YP_002562982.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222114618|emb|CAR43630.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 259 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 69/212 (32%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------G 97 S + +++D G ++ +E L +DAV+ +H H DH+ + LR Sbjct: 21 SYLITSEDGFHLLMDAGSRALNELEKELSPLELDAVIISHYHPDHVADLGVLRHYRQLYP 80 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + +YA D + + V + + G Sbjct: 81 KQLWDAKVLPIYA----------------HNEDHGEFAKLSLADVSQGVAYNVEDGQTIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H I FR + + D F + ++ D + D Sbjct: 125 PFDITFIKTVHPVI-CYAFRIRERQTGQVLVFTADTGYF-EDLAAFAKDADLFLADVYLY 182 Query: 212 G---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + + K +LTHM Sbjct: 183 EGNENHPAHLTTKEAGQIAQKAGVKKLVLTHM 214 >gi|169334715|ref|ZP_02861908.1| hypothetical protein ANASTE_01121 [Anaerofustis stercorihominis DSM 17244] gi|169257453|gb|EDS71419.1| hypothetical protein ANASTE_01121 [Anaerofustis stercorihominis DSM 17244] Length = 238 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 87/226 (38%), Gaps = 23/226 (10%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +N +++D G + + + ++ ID ++ +H H+DHI+ + LR Y + I +YA Sbjct: 27 NNKKILMDIGSGSLVNLQKVCRIEDIDMIILSHLHSDHINDLFVLRYYLKLIDKKIPLYA 86 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 F FK + + + +E +D+ I S P+ + Sbjct: 87 P----NSPSSEFD-RFKDEECFDVKVLEDDTEVELDDIKISFLS-----TQHPVDTFMTK 136 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKK 226 I + Y D + ++ +DF ++D + ++H S E+ K Sbjct: 137 IE---YDNKIFVYSGD-SIVNDNLKTFIKGVDFALLDGAFLSSQKLNRNTHMSSYEAAKT 192 Query: 227 IELINPKNAILTHMHVDLDYDM----VLKSTPSRVVPAFDGMQFSS 268 + + K ++TH+ +D K + ++ A ++ Sbjct: 193 AKEMKVKKLMITHLAPFIDRKEYLFDAKKGSDEEILLALPMLKVEI 238 >gi|139439221|ref|ZP_01772663.1| Hypothetical protein COLAER_01677 [Collinsella aerofaciens ATCC 25986] gi|133775245|gb|EBA39065.1| Hypothetical protein COLAER_01677 [Collinsella aerofaciens ATCC 25986] Length = 269 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 88/270 (32%), Gaps = 79/270 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 H ILG G+ G+ I G ++VD G Sbjct: 2 SCLHLHILGSGS-------KGNC----------------ALIE-----GPQGLIMVDDGL 33 Query: 63 DFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 + R ++ A+L TH H+DHI G+D + P+ Sbjct: 34 SRRETLKRMAELGLSADNVSALLITHEHSDHIKGLD---VWCKHWHGPL----------- 79 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F + + ++ + +E D + AG I H I+ +G+R Sbjct: 80 --------FASRGTLSSKENLSHLPVEEFDPGDTLSIAG--IHVQTYSTSHDVINPVGYR 129 Query: 178 F----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------S 216 F ++ + TD ++++ L++ L +++ L+ G + Sbjct: 130 FDTLDDSIGFATDTGELSSQAMNTLEDCRVLALESNHDVTMLREGEYPRFLQERILSARG 189 Query: 217 HFSLSESLKKIELINPKNA-ILTHMHVDLD 245 H S ++ + + + L MH+ D Sbjct: 190 HLSNGQAAEAARELVTERTEQLIAMHISQD 219 >gi|296393942|ref|YP_003658826.1| hypothetical protein Srot_1532 [Segniliparus rotundus DSM 44985] gi|296181089|gb|ADG97995.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length = 265 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 73/251 (29%), Gaps = 47/251 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S ++ + VD G Sbjct: 1 MRLTVLGCSGS----VTGPDSPA------------SGYLVTAPDAPP----LAVDFGGGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHL 118 + R + VL +H HADH I GL ++ P +Y PD L Sbjct: 41 LGALQRHANPNDVTVLLSHLHADHCLDIPGL--LVWRRYGPDPAVERALLYGPPDAALRL 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + DD + +E G + P H S GFR Sbjct: 99 GVASAEIGGECDDLS-------DTLEVRSWVEREPVRFGELSVTPFEVFHPP-QSYGFRI 150 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALK-----NGLHSSHFSLSESLKKIE 228 + +AY D E + D + +A N H S +E+ + Sbjct: 151 EDSSGAVLAYSGDT-GLCDAVEELARGADLFLCEASWTHDPGNRPLGVHLSGTEAGEVAR 209 Query: 229 LINPKNAILTH 239 ++TH Sbjct: 210 RAGAAELLITH 220 >gi|288556155|ref|YP_003428090.1| ribonuclease Z [Bacillus pseudofirmus OF4] gi|288547315|gb|ADC51198.1| ribonuclease Z [Bacillus pseudofirmus OF4] Length = 305 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 101/322 (31%), Gaps = 77/322 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G+ GVP I R S++ I + ++G T + D G Sbjct: 1 MEFHFLGTGS--GVPAI--------------ERNVSAMAIRFLQQKG--TQWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL-- 118 Q+L + ID + TH H DHI G+ GL G Q P+ +Y + Sbjct: 43 QHQLLHSPITLTKIDRIFITHLHGDHIFGLPGLMGSRSFQGALNPLIIYGPRGLAPFIET 102 Query: 119 -------FESFRYCFKALDDR--------TYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + Y L++ + + V+ + + K G ++ Sbjct: 103 SLAVSKTHLRYPYEVIELEEGLMFETEHLSVEALALNHVMPSFAFKLTEKDKPGTLDIKK 162 Query: 164 ILQ------QHGRISSLGFRF-------------------GNVAYC-TDVNAFPAESLEK 197 + + H ++ G G + D E ++ Sbjct: 163 LEEYNIPKGPHYQLLKEGKTITLEDGRKINGQEFVGPPKNGRIVVIAGDTRP-TKEMIKF 221 Query: 198 LQNLDFLIIDAL---KNGLHS---SHFSLSESLKKIELINPKNAILTHMH--VDLDYDMV 249 ++ D LI +A H+ H + E+ + K +LTH+ + + Sbjct: 222 SRDADILIHEATFRADKADHAVQFGHSTTLEAASLAKEAKVKTLLLTHISSRYTGEEEAF 281 Query: 250 LKSTP---SRVVPAFDGMQFSS 268 L A D M ++ Sbjct: 282 LNEAKTIFENTHLAHDLMVYTL 303 >gi|282859127|ref|ZP_06268254.1| metallo-beta-lactamase family protein [Prevotella bivia JCVIHMP010] gi|282588082|gb|EFB93260.1| metallo-beta-lactamase family protein [Prevotella bivia JCVIHMP010] Length = 267 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 46/235 (19%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + + + ++ TH HADH+ + + + I Sbjct: 21 DTDCLMIDCGVGVRLIKKYFHMYDLPLKMVRHIILTHDHADHVKAVGSIS-----KDLGI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA K + +++ + I + + ++ G P Sbjct: 76 PVYATSLVHKGV---------SVNWAVHRKIDQSLAV---NIEKQETLQIGEFTVTPFNV 123 Query: 167 QHGRISSLGFRF--GNVAY--CTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ GN+ + TD E + ++L+++A L G + Sbjct: 124 PHDSTDCVGYSIEYGNITFVLVTDCGETTDEIRSYISKANYLVLEANHEPEKLLAGPYPL 183 Query: 217 HF--------------SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 H ++++ N K+ L H+ + ++ + + T + Sbjct: 184 HLKERILGATGHLSNEDCAKAIVSAASPNLKHVWLCHLSDENNHPELARKTIENI 238 >gi|255690180|ref|ZP_05413855.1| metallo-beta-lactamase family protein [Bacteroides finegoldii DSM 17565] gi|260624292|gb|EEX47163.1| metallo-beta-lactamase family protein [Bacteroides finegoldii DSM 17565] Length = 267 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 51/226 (22%) Query: 56 VIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + SI AV TH HADHI + L +K I VY Sbjct: 26 ILIDAGIGIRTIKKVLKDYNILMDSIRAVFITHDHADHIKAVG-----NLGEKMNIPVYT 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + YC + + P+ ++ H Sbjct: 81 TARIHAGINR--SYCMTEKLSSSVRYL-------EKQEPMMLE----DFRIESFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + + +LI++A LK G + Sbjct: 128 TDNVGYCIEIDGKVFSFLTDLGEITPTAARYISKAHYLILEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVL 250 H S S++ + + E + + L H+ D ++ + Sbjct: 188 RIASRTGHMSNSDTAEFLAENITEHL--RYIWLCHLSKDNNHPELA 231 >gi|254501220|ref|ZP_05113371.1| metallo-beta-lactamase superfamily, putative [Labrenzia alexandrii DFL-11] gi|222437291|gb|EEE43970.1| metallo-beta-lactamase superfamily, putative [Labrenzia alexandrii DFL-11] Length = 313 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 106/302 (35%), Gaps = 63/302 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG S G P I P P + +S I R ++D G Sbjct: 34 RLVILG---SKGGPAI-------RPGGP----SPTSSLIEIGGRRC-----VIDCGLGVT 74 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHL--- 118 ++ V +D + TH H+DH+ + L + + V+ D M++L Sbjct: 75 RGLVDAGVSLKELDLIFITHMHSDHVLELGPLLHTAWTSGLAHKVKVFGPVDLMEYLDGF 134 Query: 119 FESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 S RY D P +V ++ +VP ++ +G ++A+ + + Sbjct: 135 LASMRYDIDLRIDDEGRPDLRDLVEIHLLAEGEVP--LEESGLALKALRVDHP-PVVDCF 191 Query: 175 GFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------------KNGLH 214 RF +V + D FP ++ ++ D L+ +A+ + H Sbjct: 192 ALRFDTKDWSVVFSADTAFFPPLAV-FAKDCDVLVHEAMLQRGVDKIVEITGNGDRLRAH 250 Query: 215 --SSHFSLSESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSR-VVPAFDGMQ 265 +SH ++ K E+ K +L H+ + + T S + DG+ Sbjct: 251 LWASHTMAPDAAKIAEMAQAKTLLLNHLIPADLPGFEGQEWLEATETFSGQTIVGHDGLV 310 Query: 266 FS 267 + Sbjct: 311 IT 312 >gi|15790496|ref|NP_280320.1| hypothetical protein VNG1503C [Halobacterium sp. NRC-1] gi|169236232|ref|YP_001689432.1| ribonuclease Z [Halobacterium salinarum R1] gi|10580996|gb|AAG19800.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167727298|emb|CAP14084.1| homolog to ribonuclease Z [Halobacterium salinarum R1] Length = 247 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 55/283 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P +R ++ L + ++ ++VD G Sbjct: 1 MQLTFLGTGSAM----------------PTGQRMQTGLLVE-----DGDSRLLVDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHLFES 121 + R V +D VL +H H DH+ + L + V + + Sbjct: 40 LHTLARTDVGYEGVDTVLLSHHHLDHVSDLLALLKARWLAGEETLTVVGPAGTDALVTD- 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 D V ++ V + + I +H + L +RF Sbjct: 99 ---LLGVHDYLQGRVDVTLREVDVGSVGVA------GFDVTAIETEHS-MPGLAYRFGGD 148 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELINP 232 G++ + D AF L+ D H + L SL ++ Sbjct: 149 DGDLVFSADTEAF-DGMGAFADGASVLVHDCSFPDEVDVSNHPTPTQLGASLAGVD---V 204 Query: 233 KNAILTHM--HVDLDYDMVLKSTPS-----RVVPAFDGMQFSS 268 + LTH+ H + ++D + S V A DG+ Sbjct: 205 DDLYLTHLYPHTNGEHDAMTASIHEAGFDGEVHIARDGLGVEL 247 >gi|329962840|ref|ZP_08300725.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328529397|gb|EGF56310.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 284 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 57/232 (24%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHI---HGIDGLRGYFLKQKRP 105 +++D G +++ + I AV TH HADHI G+ Sbjct: 43 ILIDAGIAVRT--IKKGLKEAGISMEMIRAVFVTHDHADHIKAVGGLGEKLN-------- 92 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + + +S+ K Y P+ +E+ Sbjct: 93 IPIYTTARIHEGINKSYCMTEKLHTSARYLEKQQPMQLED-------------FHIESFE 139 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++G+ ++ TD+ + E ++ ++LI++A L+ G + Sbjct: 140 VPHDGTDNVGYCIEIDGKTFSFLTDLGEITPTAAEYIRKANYLILEANYDDEMLRMGTYP 199 Query: 216 -----------SHF-SLSESLKKIELI--NPKNAILTHMHVDLDYDMVLKST 253 H ++ + + I + L H+ D ++ + T Sbjct: 200 QYLKERITSRTGHMSNMDTAEFLADNITEQLQYIWLCHLSKDNNHPELAYKT 251 >gi|14521306|ref|NP_126781.1| ribonuclease Z [Pyrococcus abyssi GE5] gi|41017586|sp|Q9UZP4|RNZ_PYRAB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|5458524|emb|CAB50012.1| Putative sulfatase, ATSA/ELAC family [Pyrococcus abyssi GE5] Length = 307 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G P R S+ I E ++ D G Sbjct: 2 IEVIFLGTGGIKPTPE----------------RNVPSIAIKVEGEL-----ILFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + I + TH H DH G+ L K+K P+ +Y + ++ + Sbjct: 41 LRQMEIAGLSPMKIRRIFITHFHGDHYLGLPALIQTMNLWKRKEPLHIYGPENSIEFIKN 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L+ + P + V +++P + E HG + +LG+ F Sbjct: 101 -------LLNSGYFAPSFDVTV---HELPGKARLQFEKYEVWAFEVSHG-VPALGYVFK 148 >gi|251778660|ref|ZP_04821580.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082975|gb|EES48865.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 359 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 28/214 (13%) Query: 52 SNTTVIVDTGPD--FYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 N +++D G + + L+ + + +D ++ THPH DHI G+ + F I Sbjct: 65 GNQNILIDAGCNDNKALNYLKSQGISKLDYIIATHPHEDHIGGMTSVINNF-----EIGE 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY----PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + AP H ++F KAL ++ P I + + I N + ++ + Sbjct: 120 FYAPKV-NHTTKTFENMIKALQNKGLKLTAPTIGDTLTIGNATMQFLAPNSSKYQD---- 174 Query: 165 LQQHGRISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 L + + L ++GN +Y D + + + LD D LK G H SH S S+ Sbjct: 175 LNNYSIVCKL--KYGNTSYLFTGDAESLSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQ 230 Query: 223 SLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + ++ +NPK AI++ + + Sbjct: 231 A--FLDKVNPKYAIVSCGKGNDYGHPHQETIDKL 262 >gi|291535127|emb|CBL08239.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Roseburia intestinalis M50/1] Length = 265 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 37/179 (20%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQK 103 V++D G + + SID VL TH H DHI G+ + ++ Sbjct: 20 DENHVLIDAGISGKR---IENGLNSIDLKTEEMQGVLVTHEHIDHISGLG-----VIARR 71 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + +++ + I D P + G + P Sbjct: 72 YGLSIYATQGTIDAILNTKS--VGKIEESLFHAI-------TPDQPFEI----GDLLIEP 118 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 I H + ++ N A TD+ + ++K++NLD L+++A H H Sbjct: 119 ISISHDAADPVAYKIKNEEKTAAVVTDLGTYDENMIDKIKNLDVLLLEA----NHDVHM 173 >gi|167381348|ref|XP_001735675.1| zinc phosphodiesterase [Entamoeba dispar SAW760] gi|165902236|gb|EDR28121.1| zinc phosphodiesterase, putative [Entamoeba dispar SAW760] Length = 257 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 75/221 (33%), Gaps = 26/221 (11%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGID 93 R +S I + +++D G +++ + I+ VL TH H+DH+ GI Sbjct: 17 YRNTTSNLIEMQ----NGRFILIDCGDGILNTIIKLGINVKYIELVLITHLHSDHVSGI- 71 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + F DVY L E+F+ K+ + + V I D + Sbjct: 72 -IALLFNWVLNDCDVYLPEG-GDDLIETFKRISKSTINDS----VRVHQIPKGDHDKIIT 125 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G I I H I S GF F + V D L L + L+ + Sbjct: 126 LSSG-ISVGCIEIPH-EIESHGFVFKDQRGLVVCVLGDTCG---RDLSFLYKVHVLVHEC 180 Query: 209 LKNGLHS---SHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + + + E + +L H V + Sbjct: 181 TFGNSSEIKWGHSNCKIAAQCAESVYADYLLLNHFSVRFKH 221 >gi|126463209|ref|YP_001044323.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodobacter sphaeroides ATCC 17029] gi|126104873|gb|ABN77551.1| coenzyme PQQ biosynthesis protein B [Rhodobacter sphaeroides ATCC 17029] Length = 300 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 27/172 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G+P+ + C P R + +L S E +V+ P Sbjct: 2 LRIIVLGSAAGGGLPQWNCNCAGCRAARAEPALRNGQCALAASADGESW----FLVNASP 57 Query: 63 DFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L R + I V+ T+ D + G+ L++ P ++A PD Sbjct: 58 DLRQQILDTPALHPRHGLRHSPIAGVILTNAEVDAVAGL-----LTLREGWPFAIHAHPD 112 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++ L + P + P D P A G + + Sbjct: 113 VLEVLAAN-------PIFGVLRPEIVPRRPMLPDTPFEPVLADGRASGLTVR 157 >gi|253682731|ref|ZP_04863527.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] gi|253561053|gb|EES90506.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] Length = 243 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 83/241 (34%), Gaps = 44/241 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-------- 100 + +++D G ++ + ID+V+ +H H DH+ + Sbjct: 25 QSGEHNILIDCGSGILSKIQEYIPLNKIDSVILSHYHGDHVA---DIIPLQYEVGISRKL 81 Query: 101 -KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 K+ + I +Y ++ T + + I+NN ++ G + Sbjct: 82 GKRDKKIQIYGHD------------LSPKFNELTLKGVSDGNKIDNN-----IEVIIGKL 124 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KN 211 + +H + +L RF AY D ++ ++ D I + + Sbjct: 125 KVTFKWVKH-PVPTLAMRFEENGKVFAYSGDTEWC-DGVIDIAKDADLFICETSLYNNEY 182 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFS 267 G H + E K + N K +L+H+ + D ++K V AF G+ F Sbjct: 183 GKVKGHLTAGEVGKIANINNVKKLVLSHLPHYGNLDDLVKEAKQEFNGEVYRAFLGLSFQ 242 Query: 268 S 268 Sbjct: 243 L 243 >gi|187777452|ref|ZP_02993925.1| hypothetical protein CLOSPO_01019 [Clostridium sporogenes ATCC 15579] gi|187774380|gb|EDU38182.1| hypothetical protein CLOSPO_01019 [Clostridium sporogenes ATCC 15579] Length = 261 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 82/238 (34%), Gaps = 55/238 (23%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++VD G + + ++E SID + TH H DHI G+ L +K Sbjct: 18 SSEKSKILVDAGLSGKSIELALSRIKESPSSIDGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + ++ + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKN-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 PISHDAASPFGYTICSKNKKASIATDLGVFSKDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKST 253 H S + + I I KN IL H+ +L Y VL + Sbjct: 177 PYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNAL 234 >gi|255527895|ref|ZP_05394740.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|296184662|ref|ZP_06853073.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|255508422|gb|EET84817.1| ribonuclease Z [Clostridium carboxidivorans P7] gi|296050444|gb|EFG89867.1| ribonuclease Z [Clostridium carboxidivorans P7] Length = 307 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 84/302 (27%), Gaps = 93/302 (30%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LGCG ++ P NR +SL IS +++D G + Sbjct: 4 ICLLGCGGNVPTP---------------NRNL-TSLLISYKG-----KKILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESF 122 + L I + +TH HADH+ G+ GL +K P+ + + Sbjct: 43 SMKILGWGFKDISVICFTHYHADHVIGLPGLLLTIANSGRKEPLYIVGPEGLSTIVKGL- 101 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMK--SAGGVIEAIPILQQHGRISSLGF---- 176 + P V+ I + +D G +E H + L + Sbjct: 102 -----TVVSPVLPYYVDLIELPTDDENYFEDKIIQIGDMELWAQPAYH-TMPCLAYSVNV 155 Query: 177 -----------------------------------------------RFGNVAYCTDVNA 189 R ++YCTD Sbjct: 156 NRSKKFNVEKARLNNVPLNLWNLLQKGENIKEGGKVYTPDMVLGEERRGLKLSYCTDTRP 215 Query: 190 FPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 E + ++ D + + L L + H SE+ K LTH Sbjct: 216 -TEELISFVKKSDLFVCEGMYGDDEKLPKALENRHMLFSEAALMAREAEVKELWLTHFSP 274 Query: 243 DL 244 L Sbjct: 275 SL 276 >gi|256751628|ref|ZP_05492503.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749437|gb|EEU62466.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 259 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 29/180 (16%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGI 92 RS + + + +++D G +L + S+ A+L TH H DHI G Sbjct: 6 LRSGSSGNAIYINHKDVHILIDAGLSGRTIEKALLNIGINPKSLSAILITHEHKDHIIG- 64 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++ I +YA + + + + ++ Y Sbjct: 65 ----AGVLSRRYNIPIYANKATWDAMEKDIKEI--SEKNKLY-------------FTTGE 105 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G ++ +P + H + +GF F ++ TD+ L D ++++A Sbjct: 106 EFEIGDVKIMPFKKSHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLEA 165 >gi|46906532|ref|YP_012921.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b F2365] gi|47091428|ref|ZP_00229225.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|47096380|ref|ZP_00233975.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|224498860|ref|ZP_03667209.1| metallo-beta-lactamase family protein [Listeria monocytogenes Finland 1988] gi|226222927|ref|YP_002757034.1| hypothetical protein Lm4b_00319 [Listeria monocytogenes Clip81459] gi|254825656|ref|ZP_05230657.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|254828751|ref|ZP_05233438.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254831881|ref|ZP_05236536.1| hypothetical protein Lmon1_11030 [Listeria monocytogenes 10403S] gi|254853435|ref|ZP_05242783.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|254900520|ref|ZP_05260444.1| hypothetical protein LmonJ_11919 [Listeria monocytogenes J0161] gi|254913529|ref|ZP_05263541.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254932519|ref|ZP_05265878.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|254937890|ref|ZP_05269587.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|254992481|ref|ZP_05274671.1| hypothetical protein LmonocytoFSL_04961 [Listeria monocytogenes FSL J2-064] gi|255520931|ref|ZP_05388168.1| hypothetical protein LmonocFSL_06871 [Listeria monocytogenes FSL J1-175] gi|300764576|ref|ZP_07074568.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|46879797|gb|AAT03098.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47015254|gb|EAL06192.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|47020105|gb|EAL10841.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225875389|emb|CAS04086.1| Unknown [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601158|gb|EEW14483.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258606805|gb|EEW19413.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|258610498|gb|EEW23106.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|293584074|gb|EFF96106.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|293591539|gb|EFF99873.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|293594901|gb|EFG02662.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|300514683|gb|EFK41738.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|328467901|gb|EGF38941.1| hypothetical protein LM1816_09200 [Listeria monocytogenes 1816] gi|328476130|gb|EGF46839.1| hypothetical protein LM220_01792 [Listeria monocytogenes 220] Length = 276 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 85/281 (30%), Gaps = 79/281 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + I + + G ++ H I + Sbjct: 98 KAMDNM---------------IGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD + D +L ++ L+ G + Sbjct: 143 YIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + ++ E+I K L H+ D + + + Sbjct: 203 EGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARM 243 >gi|186681421|ref|YP_001864617.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186463873|gb|ACC79674.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102] Length = 298 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 90/282 (31%), Gaps = 59/282 (20%) Query: 20 RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV 79 R G+ C ++R V + G+ V+ G + Q+ E + Sbjct: 28 RYGGNTP-CISMQAGDKRL--------VFDAGTGLHVL---GQSWLRQMPLEG-----HI 70 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYA----APDCMK-HLFESFRYCFKALDDRTY 134 +TH H DH+ G F+K +Y ++ L + + Sbjct: 71 FFTHSHWDHMQGFPFFTPGFVK-GNDFHIYGAIAPDGSTIEQRLNDQM-----LHPNFPV 124 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF 190 P + ++ D+ + H ++G+R G VAY TD F Sbjct: 125 PLQIMQANLKFYDIRPGQPIHIDDVTVETAPLNHPG-EAVGYRVNWRGGAVAYITDTEHF 183 Query: 191 PAE----SLEKLQNLDFLIIDA--LKNGLHSS--------HFSLSESLKKIELINPKNAI 236 P L +N D L+ D+ HS H + E++K + N K + Sbjct: 184 PDRLDDNVLWLARNADILVYDSTYTDEEYHSPKTPKIGWGHSTWQEAVKVAQAANVKTLV 243 Query: 237 LTHMHVDLDY---------DMVLKSTPSRVVPAFDGMQFSSP 269 + H D + + P + A +GM P Sbjct: 244 IYH--HDPAHNDDFLDCVGQQASEKFP-GAIMAREGMVLQIP 282 >gi|300690635|ref|YP_003751630.1| arylsulfatase (aryl-sulfate sulphohydrolase) [Ralstonia solanacearum PSI07] gi|299077695|emb|CBJ50331.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia solanacearum PSI07] Length = 321 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 82/264 (31%), Gaps = 51/264 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 44 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 83 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHL--- 118 Q + + +I V TH H+DH G L + P+D + P Sbjct: 84 RQYVSAGLKLRAIRHVFITHQHSDHNADYGALMLLAWGTDLAGPVDAWGPPPLAAMTAKF 143 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 E + Y + P + P++ + + ++ L +H + + +R Sbjct: 144 LELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYR 203 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLHS 215 F ++ D + D L+ +D L+ L + Sbjct: 204 FDAADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNATTLREHLLA 262 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 SH S + + K +L+H Sbjct: 263 SHTSTEDVGRIATEAKVKTLVLSH 286 >gi|229095691|ref|ZP_04226671.1| Beta-lactamase domain protein [Bacillus cereus Rock3-29] gi|229114641|ref|ZP_04244055.1| Beta-lactamase domain protein [Bacillus cereus Rock1-3] gi|228668706|gb|EEL24134.1| Beta-lactamase domain protein [Bacillus cereus Rock1-3] gi|228687724|gb|EEL41622.1| Beta-lactamase domain protein [Bacillus cereus Rock3-29] Length = 244 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSHIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFHSLTHAPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRIKAGSNAVVYSADSSYISEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKS---TPSRVVPAFDGMQFSS 268 H + +E + N K +LTH+ H+ D+V ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHIGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|191638726|ref|YP_001987892.1| Beta-lactamase-like [Lactobacillus casei BL23] gi|239632099|ref|ZP_04675130.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|190713028|emb|CAQ67034.1| Beta-lactamase-like [Lactobacillus casei BL23] gi|239526564|gb|EEQ65565.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382769|gb|AEA54245.1| Beta-lactamase domain-containing protein [Lactobacillus casei LC2W] gi|327385956|gb|AEA57430.1| Beta-lactamase domain-containing protein [Lactobacillus casei BD-II] Length = 245 Score = 68.2 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 81/234 (34%), Gaps = 28/234 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DHI + L+ Y+ +K Sbjct: 25 ESGDYHLLMDLGSGGLLSLEQQFDPLKLDAVLLTHYHHDHIADVGVLQYYYQLRKGDKKV 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F + Y + + + Sbjct: 85 SPLPIYGHTKDPLNFASLTFG---PYTTAKGYTADSTLHLGPLTLTFLETQHPVPAFAVR 141 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSS-HFS 219 + G+I +D FPA + ++ D L+ D L + H + Sbjct: 142 IVEDVTGKILVN---------TSDTRYFPALT-PFSKDADLLMADTNFLADQPQPRWHLT 191 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-----VVPAFDGMQFSS 268 E+ K + K +LTH+ LD + + + + A D + S Sbjct: 192 APEAGKLAKDAQVKRLLLTHLPQQLDLVTLKQQAQAAAGGIPIQLAEDDLTISI 245 >gi|188588842|ref|YP_001921523.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499123|gb|ACD52259.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 359 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 80/214 (37%), Gaps = 28/214 (13%) Query: 52 SNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + + L+ + +D VL THPH DHI G+ + + + Sbjct: 65 DGKNILIDAGCNDNKALNYLKSIGISKLDYVLATHPHEDHIGGMTS----VINNFKIGEF 120 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY----PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 YA H +F KAL ++ P I + + I N + ++ Sbjct: 121 YAPKVT--HTTRTFENMVKALQNKGLKLTAPTIGDTLTIGNATLQFLAPNS------TTY 172 Query: 165 LQQHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + ++GN +Y D + + + LD D LK G H SH S S+ Sbjct: 173 QDMNNYSIVCKLKYGNTSYVFMGDAESLSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQ 230 Query: 223 SLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 ++ +NP+ AI++ + + Sbjct: 231 V--FLDKVNPQYAIVSCGKGNDYGHPHQETINKL 262 >gi|113474494|ref|YP_720555.1| ribonuclease Z [Trichodesmium erythraeum IMS101] gi|122965220|sp|Q118J2|RNZ_TRIEI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110165542|gb|ABG50082.1| RNAse Z [Trichodesmium erythraeum IMS101] Length = 321 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 94/331 (28%), Gaps = 90/331 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQITFLGT--SSGVPT---------------RSRNVSSIALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q LR +V + + TH H DH+ G+ GL + + +Y P +L Sbjct: 42 QHQFLRSDLKVSQLSRIFITHMHGDHVFGLMGLLASCGLGGNVKSVTLYGPPALEDYLQA 101 Query: 121 -----------------------------------------SFRYCFKALDDRTYPPIVN 139 +F Y D + + Sbjct: 102 GLRYSQTHLAYPIKVHKSKPGVIYEDDEYVVSCAYLKHRVTAFGYRVTEKDRPGHFNVEK 161 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAE 193 + PI K G +P GR + G YCTD F Sbjct: 162 AKALGIPPGPIYRKLKQGEFVTLP----DGRKINGADLCGAPHVGRKFVYCTDTV-FCDG 216 Query: 194 SLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNAILTHMH------ 241 ++E Q D L+ +A + H + + + + K+ ++TH Sbjct: 217 AVELSQGADLLVHEATFSHQDAEMAFQRLHSTSTMAAQVALAAGVKHLMMTHFSPRYAPG 276 Query: 242 VDLDYDMVLKSTP---SRVVPAFDGMQFSSP 269 + D +L+ A+D + + P Sbjct: 277 NSVLLDDLLQEARAIFPNTDMAYDFLSYEIP 307 >gi|239635863|ref|ZP_04676886.1| metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|239598487|gb|EEQ80961.1| metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|330685291|gb|EGG96952.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU121] Length = 272 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 28 ENEKGSILVDVGLTGKKMEELFGQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 81 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG IE+ Sbjct: 82 YNLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TQSIAGFDIES-- 126 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 127 FNVSHDAIDPQFYIFHNDHKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 186 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 187 YPWKTKQRILGDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 230 >gi|46446093|ref|YP_007458.1| ribonuclease Z [Candidatus Protochlamydia amoebophila UWE25] gi|56749434|sp|Q6ME16|RNZ_PARUW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|46399734|emb|CAF23183.1| putative binuclear zinc phosphodiesterase [Candidatus Protochlamydia amoebophila UWE25] Length = 306 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 87/295 (29%), Gaps = 92/295 (31%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGC +S PT +N R + + D G Sbjct: 6 LTILGC-SSQQ------------PTRFRNH--------GAYLLRWNGEGFLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHL-FES 121 Q + + I+ + +H H DH G+ +R K + PI Y K+ Sbjct: 45 QFIFANIAPSVINRIFISHFHGDHCLGLGSILMRLNLDKVRHPIHCYYPASGKKYFDRLR 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + + + P+ ++E++ G + QHG I ++G+R Sbjct: 105 YGTIYHEMIHVVEHPVSKAGLVEDD----------GRFKIEAAFLQHG-IENIGWRITEA 153 Query: 179 --------------------------------GNVAYCTDVNAF-------------P-A 192 G Y DV+ P Sbjct: 154 DTRKFDNQKLIDRGIRGSLVKELQEKGQLNLDGQTIYLDDVSWIRKGDQFSVVIDTLPCQ 213 Query: 193 ESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 +++ +N L+ ++ H SH + ++ + N K ILTH Sbjct: 214 NAIDIARNATLLLCESTYLEEHKELARLHSHLTAKQAALIAKEANAKQLILTHFS 268 >gi|229160159|ref|ZP_04288159.1| Beta-lactamase domain protein [Bacillus cereus R309803] gi|228623293|gb|EEK80119.1| Beta-lactamase domain protein [Bacillus cereus R309803] Length = 244 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQIQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + G Sbjct: 85 LPELPIYG----------------HTFDENGFQSLTHEPHTKGIAYNPEETLQVGPFSIS 128 Query: 163 PILQQHGRISSLGFRF--GN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R G+ V Y D + P + ++ D I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDIVVYSADSSYIPEF-IPFTKDADLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPSNLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|297531138|ref|YP_003672413.1| beta-lactamase [Geobacillus sp. C56-T3] gi|297254390|gb|ADI27836.1| beta-lactamase domain protein [Geobacillus sp. C56-T3] Length = 244 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 73/236 (30%), Gaps = 37/236 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 ++VD G ++ V ++DAV+ +H H DHI I L+ L K Sbjct: 25 EHDGFFLLVDCGSGALAKLQNYTAVENLDAVIISHYHYDHIADIGPLQYARLIHKNLGAD 84 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y D+ + + + + E A G Sbjct: 85 LPVLPIYG----------------HMEDEAAFSRLTHSGITEGMAYDPNGTLAVGPFSIT 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H R V Y D + P L + D LI + +N Sbjct: 129 FMKTVH-PAPCYAMRITAGGKTVVYTADSSYIPEF-LPFAKGADLLICECNFYAGQNAAP 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRVVPAFDGMQF 266 + H + E+ E LTH+ ++ +++ + A G+ + Sbjct: 187 AGHMTSEEAAAIAEGARVGELWLTHLPHVGRHEQLVEEAGRTFRGVIRLARTGLTW 242 >gi|257387128|ref|YP_003176901.1| ribonuclease Z [Halomicrobium mukohataei DSM 12286] gi|257169435|gb|ACV47194.1| ribonuclease Z [Halomicrobium mukohataei DSM 12286] Length = 306 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 100/336 (29%), Gaps = 101/336 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S VP R S+L ++R ++ ++ D G Sbjct: 1 MRVTFLGT--SGAVPTT--------------ERNPSALFVNRDGDK-----LLFDCGEGT 39 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 Q++R ++D V TH H DH+ GI GL F ++ P+ ++A + + Sbjct: 40 QRQMMRFGTGFAVDHVFVTHTHGDHVLGIPGLLQTFDFNDREEPLAIHAPAGTRGTIED- 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----- 176 + P + + + + G + A I QH R S+G+ Sbjct: 99 ------LVSVTGDTPSFPVRITQVSAGDTVLDGDGYEVRA--IRTQH-RCQSVGYAVVED 149 Query: 177 ----RFGN---------------------------------------------VAYCTDV 187 RF + Y D Sbjct: 150 DRKGRFDREKAEEELGIEPGPKYSKLHRGEPVEHEGRTIQPEAVVGPDRPGRTLVYTGDT 209 Query: 188 NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +E ++ D L+ DA + ++H + E+ + + K LTH+ Sbjct: 210 RP-TDSVVEASEDADLLVHDATFADDWAERARKTAHATGREAAEVAQEAGAKRLALTHIS 268 Query: 242 VDLD------YDMVLKSTPSRVVPAFDGMQFSSPIP 271 ++ V DG + P P Sbjct: 269 TRYGGNPTPILSDAREAFDGEVFVPDDGRRIDVPFP 304 >gi|154496021|ref|ZP_02034717.1| hypothetical protein BACCAP_00304 [Bacteroides capillosus ATCC 29799] gi|150274904|gb|EDN01960.1| hypothetical protein BACCAP_00304 [Bacteroides capillosus ATCC 29799] Length = 262 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 65/251 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL +S T +++D G + LRE + +L TH H+DHI G++ Sbjct: 15 SLLVS-----DGETHILIDAGISARRITKSLRELGIDPSQLSGILITHEHSDHICGLN-- 67 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + VYA+ + L + +DR I + + Sbjct: 68 ---TLTKQFTMPVYASRGTGRQLCYRIAFL----EDR----------IRTFETGNAFEIG 110 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G +E+ H S+G+ A TD+ E +Q + L+ + Sbjct: 111 GLTVES--FATPHDTAESVGYAVSAGGRKAAVVTDLGRVTEEVARGIQGANLLVAETNYD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLK 251 L++G + H S + IL H+ + Sbjct: 169 PEWLQSGPYPYYLKERIQGGWGHLSNQAGAELACSAVENGASTVILAHLSKE-------N 221 Query: 252 STPSRVVPAFD 262 +TP++ A+D Sbjct: 222 NTPAK---AYD 229 >gi|16802337|ref|NP_463822.1| hypothetical protein lmo0291 [Listeria monocytogenes EGD-e] gi|224502415|ref|ZP_03670722.1| hypothetical protein LmonFR_07829 [Listeria monocytogenes FSL R2-561] gi|284800590|ref|YP_003412455.1| hypothetical protein LM5578_0337 [Listeria monocytogenes 08-5578] gi|284993776|ref|YP_003415544.1| hypothetical protein LM5923_0336 [Listeria monocytogenes 08-5923] gi|16409656|emb|CAD00818.1| lmo0291 [Listeria monocytogenes EGD-e] gi|284056152|gb|ADB67093.1| hypothetical protein LM5578_0337 [Listeria monocytogenes 08-5578] gi|284059243|gb|ADB70182.1| hypothetical protein LM5923_0336 [Listeria monocytogenes 08-5923] Length = 276 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 85/281 (30%), Gaps = 79/281 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + I + + G ++ H I + Sbjct: 98 KAMDNM---------------IGEVSSDQKFQFDMETVKNFGSMQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD + D +L ++ L+ G + Sbjct: 143 YIFHKGNKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + ++ E+I K L H+ D + + + Sbjct: 203 EGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARM 243 >gi|222445953|ref|ZP_03608468.1| hypothetical protein METSMIALI_01601 [Methanobrevibacter smithii DSM 2375] gi|222435518|gb|EEE42683.1| hypothetical protein METSMIALI_01601 [Methanobrevibacter smithii DSM 2375] Length = 300 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 91/328 (27%), Gaps = 95/328 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG +++ R + + E ++ D G Sbjct: 1 MEITFLGTSSAV----------------HSYTRNHPGIILKAFGE-----VMLFDCGEST 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP-------- 112 Q++ ++ I + +H H DHI G+ GL F +++P+ +Y Sbjct: 40 QRQLIYAKISPMKISKIFISHYHGDHILGLPGLLQSLNFRGREKPLTIYGPKGLKKVENA 99 Query: 113 -DCMKHLFESFR----------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + F Y K+ + + + E A Sbjct: 100 IYSLGYCKFDFPIEFIEISSETILETDEYIIKSQEVMHNVTNLAYSIEEKKKPRFLRNKA 159 Query: 156 ---GGVIEAIPILQQHG-RISSLGFRFG------------NVAYCTDVNAFP-AESLEKL 198 G + + +G + G + Y D P E +E Sbjct: 160 IELGVPVGPLFGKLHNGEEVEVNGKIIKPEQVLGDARKGIKITYSGDTR--PCEEMIEFA 217 Query: 199 QNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINPKNAILTHMHVDL 244 +N LI H S H + ++ + N K +LTH+ Sbjct: 218 KNSTLLI--------HESTYTLEDDDKARENFHSTSQDAATIAKCSNTKRLVLTHISTRY 269 Query: 245 -DYDMVLKSTP---SRVVPAFDGMQFSS 268 D + +LK V A D M Sbjct: 270 TDTEDLLKEAKKVFENVEVADDLMTIEI 297 >gi|308271425|emb|CBX28033.1| hypothetical protein N47_G33570 [uncultured Desulfobacterium sp.] Length = 274 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 88/261 (33%), Gaps = 55/261 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G VP + +R+ S+ I +++D G Sbjct: 21 MSVTILGSGT--CVPSL--------------KRSSCSVLIET-----GKAKILIDCGLGT 59 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVY-----AA 111 ++L + I +L +H H DH L + K P I + Sbjct: 60 IRRLLENSTEIYDISHILLSHFHPDHTG---ELVSFLFASKYPDGSKRKIPLTVIGGRGL 116 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F P ++N I +++ I + I +H + Sbjct: 117 SNFYAGLKSVFG-----NWIDLMPSVLNIIELDSGKNAIRLNDTVLEY----ISVEH-NV 166 Query: 172 SSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLH-SSHFSLSESL 224 SL ++ +V Y D F ++ N D LI + AL + L H + S + Sbjct: 167 ESLAYKITGNNGCSVVYSGDT-DFCDNLIKISNNTDLLICESALPDELKVKGHLTPSFAG 225 Query: 225 KKIELINPKNAILTHMHVDLD 245 + N K ILTH + + D Sbjct: 226 RIATAANAKKLILTHFYPECD 246 >gi|251811386|ref|ZP_04825859.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|293367559|ref|ZP_06614212.1| metallo-beta-lactamase YycJ [Staphylococcus epidermidis M23864:W2(grey)] gi|251805135|gb|EES57792.1| beta-lactamase [Staphylococcus epidermidis BCM-HMP0060] gi|291318272|gb|EFE58665.1| metallo-beta-lactamase YycJ [Staphylococcus epidermidis M23864:W2(grey)] Length = 260 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 70 YKLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSLAGFDIES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 175 YPWKTKQRILSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 218 >gi|222150275|ref|YP_002559428.1| metallo-beta-lactamase family protein YycJ [Macrococcus caseolyticus JCSC5402] gi|222119397|dbj|BAH16732.1| metallo-beta-lactamase family protein YycJ [Macrococcus caseolyticus JCSC5402] Length = 263 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 80/243 (32%), Gaps = 51/243 (20%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + Q+ R +V ++ +L TH H DHI G+ L +K Sbjct: 19 ESEKGSLLVDAGLTGKKIEGLFDQIDR-KVEHLNGILVTHEHIDHIKGLG-----VLARK 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA + + I NP AG IE+ Sbjct: 73 YKLPVYANEKTWARIEHA-----DKKIPSDQKFIFNPYE--------TKSIAGMDIES-- 117 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H + + F N + TD + D + +D L+ G Sbjct: 118 FGVSHDAVDPQFYIFNNNYKKLTVITDTGYVSDRMKGMIHGSDCYVFESNHDVDMLRMGR 177 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H S ++ + + + K L+H+ D + + + + +++ Sbjct: 178 YPWKTKQRILSDMGHVSNEDAAYAMRDVITGSTKRIYLSHLSQDNNMKDIARMSVQQILN 237 Query: 260 AFD 262 A D Sbjct: 238 AHD 240 >gi|325690804|gb|EGD32805.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK115] gi|325696127|gb|EGD38018.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK160] Length = 266 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 94/292 (32%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 V + + + G ++ H + +RF Sbjct: 93 DLG---------------KLDVSQKHIFELGKTKTFGDLDVESFGVSHDAVCPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|291299681|ref|YP_003510959.1| coenzyme PQQ biosynthesis protein B [Stackebrandtia nassauensis DSM 44728] gi|290568901|gb|ADD41866.1| coenzyme PQQ biosynthesis protein B [Stackebrandtia nassauensis DSM 44728] Length = 294 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 34/227 (14%) Query: 8 TILGCGASLGVPRITGDWGAC---DPTNPKN-RRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG A G P+ C +P+ RT+ L IS ER ++V+ PD Sbjct: 4 ILLGTAAGGGFPQWNCACPQCVKCRSGDPRVPSRTQDGLAISTDGERW----LLVNASPD 59 Query: 64 FYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 Q+ R + I+ VL T DH G+ L++ + V+A Sbjct: 60 LRYQITRTKALAPGPGRRETPIEGVLLTDGELDHTLGL-----LTLREHAGLKVWAPATV 114 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-- 172 + L F Y +E+ +++ G + Sbjct: 115 LSALQNDFP---IQDVIHRYNAW-EWRELESTICGFTVETFGLGRKRPKYAVGSFAEGDW 170 Query: 173 SLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + +RF G + Y ++ +P L + +I+D Sbjct: 171 VVAYRFIDAESGGVLVYAPCLSQWPPGFDTWLDSAGCVIVDGTFYSP 217 >gi|329728492|gb|EGG64928.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU144] Length = 266 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 71/223 (31%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G + + ++ +L TH H DHI G+ L +K Sbjct: 22 ESEKGSLLVDVGLTVKKMEELFSQIDRNIKDLNGILVTHEHIDHIKGLG-----VLARKY 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + K + + + P+ + + AG IE+ Sbjct: 77 KLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSLAGFDIES--F 121 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H I + F TD +Q D + +D L+ + Sbjct: 122 NVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCRY 181 Query: 215 S-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 H S ++ L ++I N K L+H+ D Sbjct: 182 PWKTKQRILSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|315925636|ref|ZP_07921846.1| metallo-beta-lactamase superfamily protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621177|gb|EFV01148.1| metallo-beta-lactamase superfamily protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 274 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 68/224 (30%), Gaps = 55/224 (24%) Query: 52 SNTTVIVDTGPDFY---MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G ++ V +D +L TH H DHIHG L ++ + Sbjct: 32 GRTRLLVDAGLSGRKIEQGLVSADVLPTELDGILITHEHRDHIHG-----AGVLSRRYHL 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA---GGVIEAIP 163 +YA + + I+ +V + G ++ Sbjct: 87 PIYANAATWEAM------------------APELGKIDGANVRFFVTGVPFDIGDLQIDS 128 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII----DA--LKNGL 213 H +GF ++ TD L L+ + +++ DA L+ G Sbjct: 129 FPISHDAAEPVGFAIDSGNHSLGIATDTGVMTDTILGSLKGRELVVLESNHDAAMLETGP 188 Query: 214 HS-----------SHFSLSESLKKI---ELINPKNAILTHMHVD 243 + H S + K +L H+ + Sbjct: 189 YPYPLKRRIAGEHGHLSNDTAGDTAVTLAESGVKQIVLAHLSHE 232 >gi|241663940|ref|YP_002982300.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12D] gi|240865967|gb|ACS63628.1| beta-lactamase domain protein [Ralstonia pickettii 12D] Length = 319 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 83/268 (30%), Gaps = 51/268 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K +LG + G PT KNR + + + + + +VD G Sbjct: 38 KKGTRLILLGT--AGG------------PTPKKNRSAPAQVIVI------NGVSYVVDCG 77 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q + + I V TH H+DH G L + P+D + P Sbjct: 78 NGVARQYVTAGLKLKDIRHVFLTHQHSDHNADYGTLMLLAWATDLTGPVDAWGPPPLAAM 137 Query: 118 L---FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SS 173 E + Y + P + P++ + + ++ L +H + + Sbjct: 138 TTKFLELYDYDIRTRIADEGRPPLAPMIHPHEISEGGLVMQDANVKVTSALVKHPPVSPA 197 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKN 211 FRF ++ D + D L+ +D L+ Sbjct: 198 FAFRFDSADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLRE 256 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 L +SH S E + K +L+H Sbjct: 257 HLLASHTSTEEVGRIATEAKVKTLVLSH 284 >gi|187929827|ref|YP_001900314.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12J] gi|187726717|gb|ACD27882.1| beta-lactamase domain protein [Ralstonia pickettii 12J] Length = 321 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 83/268 (30%), Gaps = 51/268 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K +LG + G PT KNR + + + + + +VD G Sbjct: 40 KKGTRLILLGT--AGG------------PTPKKNRSAPAQVIVI------NGVSYVVDCG 79 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q + + I V TH H+DH G L + P+D + P Sbjct: 80 NGVARQYVTAGLKLKDIRHVFITHQHSDHNADYGTLMLLAWATDLTGPVDAWGPPPLAAM 139 Query: 118 L---FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SS 173 E + Y + P + P++ + + ++ L +H + + Sbjct: 140 TTKFLELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPA 199 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKN 211 FRF ++ D + D L+ +D L+ Sbjct: 200 FAFRFDSADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLRE 258 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 L +SH S E + K +L+H Sbjct: 259 HLLASHTSTEEVGRIATEAKVKTLVLSH 286 >gi|56967240|pdb|1XTO|A Chain A, Crystal Structure Of The Coenzyme Pqq Synthesis Protein (Pqqb) From Pseudomonas Putida, Northeast Structural Genomics Target Ppr6 Length = 311 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 87/311 (27%), Gaps = 63/311 (20%) Query: 9 ILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C D T RT+SS+ +S ++ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHW----ILCNASPDI 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ I+A++ DH G+ LR Q V+ Sbjct: 61 RAQLQAFAPXQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQ-----VWCTDXVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L F F L + + IE + P+ S Sbjct: 116 QDLTTGFP-LFNXL--SHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHR 172 Query: 176 F----------------RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---------- 209 F G + Y + + L D L++D Sbjct: 173 FDPHPGDNLGLXVEDTRTGGKLFYAPGLGQVDEKLLAXXHGADCLLVDGTLWEDDEXQRR 232 Query: 210 -------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYD--MVLKSTPSRV 257 + H + L+ ++ + +L H++ LD + + V Sbjct: 233 GVGTRTGREXGHLAQNGPGGXLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRGV 292 Query: 258 VPAFDGMQFSS 268 AFDG Sbjct: 293 EVAFDGXSIEL 303 >gi|299136444|ref|ZP_07029627.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX8] gi|298600959|gb|EFI57114.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX8] Length = 317 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 80/282 (28%), Gaps = 85/282 (30%) Query: 52 SNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G + R E ++A+L TH H DHI G+ L ++ I Sbjct: 18 GSTRILVDAGLSCREILRRMALAGEDPAELNAILITHEHVDHISGL-----AVLARRLRI 72 Query: 107 DVYAAPDCMKH------LFESFRYCF--------KALDDRTYPPIVNPIVIENND----- 147 V+ + + Y K + V V+ Sbjct: 73 PVFFTEQTHRAWVRMLTPRTTMSYTKWMEMMQREKEARAASVAAQVEANVLVEEKPAEEE 132 Query: 148 -----------------------VPICMKSAGGVIEAIPILQQHGRISSLGFRFG----- 179 G I+ P H + GF F Sbjct: 133 SPAAEEAHPAAKADAAFLPAVEYFRAGQNFCIGDIDVNPFTIPHDAVDPCGFVFHARHES 192 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLS 221 +A TD+ P + L+N+D L++++ LK+G + H S Sbjct: 193 IRMAIATDLGYIPPNVKQALRNVDVLLLESNHDLEMLKDGPYPWSVKQRVLSRVGHLSND 252 Query: 222 ESLKKIEL---INPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 + + + +L H+ + P A Sbjct: 253 AAAEFLMRDYDGGAHTIVLGHLS-------AHNNLPELARLA 287 >gi|291613004|ref|YP_003523161.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291583116|gb|ADE10774.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 50/254 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILGC S G I G N RT +S+ + V++D G Sbjct: 1 MRLRILGC--SGG---IGG-----------NLRT-TSMLLDHD--------VLIDAGTGI 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFR 123 L E + ID V TH H DHI + L + +P+ ++A + + L + Sbjct: 36 GDLSLAE-MCVIDHVFVTHSHLDHIACLPLLVDSVGFMRDQPLVIHATDETLDILRQ--- 91 Query: 124 YCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 + F D T P ++ ++ + + G + P+ H + ++G++ Sbjct: 92 HVFNWEIWPDFTEIPSLHQPILRYERIVLGETVDMGGRKITPLPANH-VVPAVGYQIDSG 150 Query: 180 --NVAYCTDVNAFPA--ESLEKLQNLDFLIIDALKNGLHS------SHFS---LSESLKK 226 ++ + D A E + +++NL++LI++ + H L+E L K Sbjct: 151 KTSLVFTGDTTTCDALWEEVNRIRNLEYLIVETAFSNAEKELAVVSKHLCPSLLAEELCK 210 Query: 227 IELINPKNAILTHM 240 + +NPK +TH+ Sbjct: 211 L-KLNPK-IYITHL 222 >gi|42559651|sp|Q8MKW7|RNZ_DROME RecName: Full=Ribonuclease Z, mitochondrial; Short=RNase Z; AltName: Full=Juvenile hormone-inducible protein 1; AltName: Full=dRNAse Z; AltName: Full=tRNA 3 endonuclease; Short=DmeZ; AltName: Full=tRNase Z; Flags: Precursor Length = 766 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 97/306 (31%), Gaps = 80/306 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 456 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 495 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGI--------------DGLRGYFLKQK 103 Q++R + + A+ +H HADH G+ D L +Q Sbjct: 496 GQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGLLRERRQLKPRADPLILLAPRQI 555 Query: 104 RP--------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 P I+ + E + + I V C S Sbjct: 556 EPWLEFYNRQIETVEDAYTLVGNGE----LLASPLSGEQVERLGITSISTCLVRHCPNSF 611 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG-- 212 G + + +H + Y D P + ++ ++ LI +A Sbjct: 612 GISLT---LAAKHNSEPV------KITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDL 660 Query: 213 ----LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDG 263 +H ++S+++++ +N ++ ILTH Y PS RV AFD Sbjct: 661 EEEARLKTHSTVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDN 717 Query: 264 MQFSSP 269 M+ + Sbjct: 718 MEVTIE 723 >gi|329735759|gb|EGG72040.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU028] Length = 266 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 22 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 76 YKLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSLAGFDIES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 181 YPWKTKQRILSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|27466940|ref|NP_763577.1| hypothetical protein SE0022 [Staphylococcus epidermidis ATCC 12228] gi|57865892|ref|YP_190071.1| metallo-beta-lactamase family protein YycJ [Staphylococcus epidermidis RP62A] gi|242243234|ref|ZP_04797679.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|282874743|ref|ZP_06283622.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|27314482|gb|AAO03619.1|AE016744_22 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57636550|gb|AAW53338.1| metallo-beta-lactamase family protein YycJ [Staphylococcus epidermidis RP62A] gi|242233183|gb|EES35495.1| beta-lactamase [Staphylococcus epidermidis W23144] gi|281296459|gb|EFA88974.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|319399896|gb|EFV88142.1| metallo-beta-lactamase superfamily protein [Staphylococcus epidermidis FRI909] gi|329736110|gb|EGG72383.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU045] Length = 266 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 22 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 76 YKLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSLAGFDIES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDVFMFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 181 YPWKTKQRILSDMGHVSNEDAGLAMSDVITGNTKRIYLSHLSQD 224 >gi|91070379|gb|ABE11293.1| conserved hypothetical protein [uncultured Prochlorococcus marinus clone HF10-88H9] Length = 312 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNITFLGT--SSGVPSLT---------------RNVSSLALKLSQSSEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I +Y + Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSEGIQIYGPSGLRSFINS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +F+ F L ++P +N + +EN + I+ +H +I + G+R Sbjct: 102 AFKSSFCKL---SFP--LNFVEVENFASENKILFENNKIKVNCACLKH-KIPAYGYRV 153 >gi|256763365|ref|ZP_05503945.1| AtsA/ElaC family protein [Enterococcus faecalis T3] gi|256684616|gb|EEU24311.1| AtsA/ElaC family protein [Enterococcus faecalis T3] Length = 246 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 25 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 82 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 83 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 126 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D ++D N Sbjct: 127 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLVDTYLFEGNE 184 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 185 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 224 >gi|21430922|gb|AAM51139.1| SD27051p [Drosophila melanogaster] Length = 766 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 97/306 (31%), Gaps = 80/306 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 456 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 495 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGI--------------DGLRGYFLKQK 103 Q++R + + A+ +H HADH G+ D L +Q Sbjct: 496 GQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGLLRERRQLKPRADPLILLAPRQI 555 Query: 104 RP--------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 P I+ + E + + I V C S Sbjct: 556 EPWLEFYNRQIETVEDAYTLVGNGE----LLASPLSGEQVERLGITSISTCLVRHCPNSF 611 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG-- 212 G + + +H + Y D P + ++ ++ LI +A Sbjct: 612 GISLT---LAAKHNSEPV------KITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDL 660 Query: 213 ----LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDG 263 +H ++S+++++ +N ++ ILTH Y PS RV AFD Sbjct: 661 EEEARLKTHSTVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDN 717 Query: 264 MQFSSP 269 M+ + Sbjct: 718 MEVTIE 723 >gi|18313960|ref|NP_560627.1| hypothetical protein PAE3282 [Pyrobaculum aerophilum str. IM2] gi|18161533|gb|AAL64809.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 235 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 15/188 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ V++D G + ++ + D V +H H DHI G+ + + I + A Sbjct: 26 TDINVLIDAGECTFAKMATCHLPWPDVVFISHKHGDHILGLPTFMLMARRLGKRIKIVAN 85 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + ++ + I + + + + + I +HG Sbjct: 86 KETLEAARALALITGIENALQHVEFIEAENALRIGETSFAFAATAHPVPTLAIRVEHGGK 145 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHS-SHFSLSESLK 225 V Y +D + + +E + D LI +A + H H + ++++ Sbjct: 146 C--------VTYSSDTSP-SDKLIELARGCDLLIHEASGNPGQEEEAHKVGHSTTADAVN 196 Query: 226 KIELINPK 233 K Sbjct: 197 IALKAGVK 204 >gi|261349508|ref|ZP_05974925.1| ribonuclease Z [Methanobrevibacter smithii DSM 2374] gi|288861872|gb|EFC94170.1| ribonuclease Z [Methanobrevibacter smithii DSM 2374] Length = 300 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 91/328 (27%), Gaps = 95/328 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG +++ R + + E ++ D G Sbjct: 1 MEITFLGTSSAV----------------HSYTRNHPGIILKAFGE-----VMLFDCGEST 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP-------- 112 Q++ ++ I + +H H DHI G+ GL F +++P+ +Y Sbjct: 40 QRQLIYAKISPMKISKIFISHYHGDHILGLPGLLQSLNFRGREKPLTIYGPKGLKKVENA 99 Query: 113 -DCMKHLFESFR----------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + F Y K+ + + + E A Sbjct: 100 IYSLGYCKFDFPIEFIEISSGTILETDEYIIKSQEVMHNVTNLAYSIEEKKKPRFLRNKA 159 Query: 156 ---GGVIEAIPILQQHG-RISSLGFRFG------------NVAYCTDVNAFP-AESLEKL 198 G + + +G + G + Y D P E +E Sbjct: 160 IELGVPVGPLFGKLHNGEEVEVNGKIIKPEQVLGDARKGIKITYSGDTR--PCEEMIEFA 217 Query: 199 QNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINPKNAILTHMHVDL 244 +N LI H S H + ++ + N K +LTH+ Sbjct: 218 KNSTLLI--------HESTYTLEDDDKARENFHSTSQDAATIAKCSNTKRLVLTHISTRY 269 Query: 245 -DYDMVLKSTP---SRVVPAFDGMQFSS 268 D + +LK V A D M Sbjct: 270 TDTEDLLKEAKKVFENVEVADDLMTIEI 297 >gi|108803334|ref|YP_643271.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764577|gb|ABG03459.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 240 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 82/256 (32%), Gaps = 53/256 (20%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 RT S + V+VD G D+ + R L AV+ TH H DH G+ Sbjct: 15 RTPRHAMHSALVVFCGGGRVMVDCGADW---LGRFGGLDPAAVVVTHAHPDHAWGL---- 67 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 ++ P VYA + L E + + ++ G Sbjct: 68 ----REGAPCPVYATRESWA-LMERY----------------PVRERRVVEPRRPFRAEG 106 Query: 157 GVIEAIPILQQHGRISSLGFRF--GNVA--YCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 V EA P+ R ++G+R G A Y DV E L+ ++ D Sbjct: 107 LVFEAFPVEHST-RAPAVGYRISAGRTAVFYAPDVVYIHGR-GEALRGVELYAGDGASVA 164 Query: 210 ------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL--------DYDMVLKSTPS 255 + H + L + A+ TH ++ + ++ Sbjct: 165 RPLVRRRGEALIGHAPIRTQLTWCAKEGVRRAVFTHCGTEIVAGDEERLEREVRRLGAER 224 Query: 256 RVV--PAFDGMQFSSP 269 V A+DGM+ P Sbjct: 225 GVEAALAYDGMEVGVP 240 >gi|323463225|gb|ADX75378.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 263 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 81/243 (33%), Gaps = 51/243 (20%) Query: 50 RGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + Q+ R ++ + +L TH H+DHI G+ L +K Sbjct: 19 ESDKGSLLVDVGLTGKKMEALFEQIDR-KISDLSGILVTHEHSDHIKGLG-----VLARK 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA + + P+ V ++ AG IE+ Sbjct: 73 YGLPVYANEKTWTCI----------DKKDSKIPLDQKFVFNPHE---TKSIAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D + +D L+ Sbjct: 118 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSERMKGMIRGSDAFMFESNHDVDMLRMCR 177 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H S ++ ++ + K L+H+ D + + + + S+++ Sbjct: 178 YPWKTKQRILSDMGHVSNEDAAHAMKDVITGQTKRIYLSHLSQDNNMKDLARMSVSQILQ 237 Query: 260 AFD 262 A D Sbjct: 238 AHD 240 >gi|119484745|ref|ZP_01619227.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] gi|119457563|gb|EAW38687.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] Length = 303 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 77/223 (34%), Gaps = 26/223 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S + R + +I D G M + ++ + +TH H DHI G FL Sbjct: 54 SCLEMRVAGKRLIFDGGTGLRMLGDAMMAEMPIEAYMFFTHYHWDHIQGFPLFTPAFLP- 112 Query: 103 KRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + P + + + F + + P + ++ I+ Sbjct: 113 GNCFHIYGSIPPQGESMKKHFIERVLHPN-SSVPLKGLQADLRFYELKAGDSMMLDDIKI 171 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDAL--KN 211 H +++G+R +V YC+D P L Q+ D LI DA+ Sbjct: 172 ETGQLNHPN-TAMGYRITWNGRSVVYCSDTEHLPDGLDENVLNLSQDADVLIYDAMYTDE 230 Query: 212 GLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDY 246 HS H + E++K E K ++ H D + Sbjct: 231 EYHSPKSPKVGWGHSTWQEAVKMAEAAGVKRVVI--FHHDPTH 271 >gi|24378806|ref|NP_720761.1| hypothetical protein SMU.303 [Streptococcus mutans UA159] gi|24376680|gb|AAN58067.1|AE014879_4 conserved hypothetical protein [Streptococcus mutans UA159] Length = 258 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 63/206 (30%), Gaps = 36/206 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKR 104 +++D G ++ +E L +DAV+ +H H DH+ + LR YF L + Sbjct: 28 DGFQLLIDCGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYPKHLWTPK 87 Query: 105 PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y D Y F L E + G + Sbjct: 88 VLPIYGHDQDT---------YEFSKLTLDGVS--------EGRAYNVNGLEQIGPFDITF 130 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---LH 214 I H + R + D F + D + D H Sbjct: 131 IKTVH-PVVCYAIRIVERTTGQIFVFTGDTGYFEDLD-KFAAGADLFLADVYLYEGNENH 188 Query: 215 SSHFSLSESLKKIELINPKNAILTHM 240 +H + E+ + K +LTHM Sbjct: 189 IAHLTTKEAGQIASAAKVKRLVLTHM 214 >gi|91976507|ref|YP_569166.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris BisB5] gi|123735507|sp|Q139H4|PQQB_RHOPS RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|91682963|gb|ABE39265.1| Coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris BisB5] Length = 308 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 60/175 (34%), Gaps = 25/175 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C + RRT++S+ +S + +++ P Sbjct: 2 MRVVVLGAAAGGGVPQWNCGCSVCRAAFADRDLRRTQASMAVSADGDHW----FLINASP 57 Query: 63 DFYMQVLREQVLS----------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D QV+ L I V+ T+ D + G+ +R + P +YA Sbjct: 58 DLRQQVIATPQLHPKPGALRHSPIAGVILTNGEVDAVAGLLSMR-----EGSPFAIYAHA 112 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L + F L+++ PI + P ++ + Sbjct: 113 KVLAILKAN--SIFNVLNEKLVS--RRPIETDQRFEPTLPDGTLSGLDVVAFSVP 163 >gi|330892502|gb|EGH25163.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. mori str. 301020] Length = 240 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 74/235 (31%), Gaps = 45/235 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + ILG A G P+ + C D + + RT+SS+ +S V+ + Sbjct: 1 MYIQILGSAAGGGFPQWNCNCVNCAGFRDGSLRAHARTQSSIALSDDGTNW----VLCNA 56 Query: 61 GPDFYMQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ LR+ I A++ DH G+ LR Q V+ Sbjct: 57 SPDIRAQLQSFAPMQPGRALRD--TGISAIVLMDSQIDHTTGLLSLREGCPHQ-----VW 109 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---- 165 + L F F+ L + +N IE + P+ Sbjct: 110 CTEMVHEDLSTGFP-LFEMLKH--WNGGLNWNRIELQGSFVIPACPNLRFTPFPLRSAAP 166 Query: 166 --QQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDA 208 H G G + Y + EK+++ D L++D Sbjct: 167 PYSPHRFDPHPGDNIGLLVEDTRTGGKLFYAPGLGKVDEALAEKMRDADCLLVDG 221 >gi|227509354|ref|ZP_03939403.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191066|gb|EEI71133.1| metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 251 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 40/236 (16%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHG 91 P N SS + N ++D G + + L +DA++ TH H DH Sbjct: 18 PANGNGTSSYLLE-----SGNFHFLIDCGSAALLSLEEILDPLKLDALILTHYHHDHTAD 72 Query: 92 IDGLRGYF-----LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 + L+ Y+ ++ + +Y LD + + P + Sbjct: 73 VGVLQYYWQLHEKRYDQKCLPIYG----------------HTLDKINFDGLSWPDSTKGV 116 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQN 200 + G H + + G R + + D FP + +N Sbjct: 117 AYDPEKQLDVGPFSITFFKMHH-PVPAFGLRITEKATGKVLVFTADTAYFPEIAY-FARN 174 Query: 201 LDFLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 D L+ D + H + +ES + + K +LTH+ D + + + Sbjct: 175 ADLLMTDT-NFYADKTGTKWHMTSTESGQLAKDAEAKRLLLTHLPAYGDLNQLKQE 229 >gi|195977340|ref|YP_002122584.1| metal-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974045|gb|ACG61571.1| metal-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 266 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF----L 100 + +++D G ++ +E L +DAV+ +H H DH+ + LR Y+ Sbjct: 28 YLVTGHDGFQLLMDAGSRSLNELEKEINPLDLDAVMISHYHPDHVADLGVLRHYYQLYPK 87 Query: 101 KQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +P + +Y + D+ + + P V + + A G Sbjct: 88 HLGKPRLLPIYGHDE----------------DEAEFAKLTLPGVSKGIAYQVDGVEALGP 131 Query: 159 IEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + I H + FR + + D F E + D + D Sbjct: 132 FDITFIKTVH-PVVCYAFRIVERATGQVLVFTGDTGYF-EELADFAAEADVFLADVYLYE 189 Query: 213 ---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + K +LTHM Sbjct: 190 GNEHHMAHLTSKEAGQLASRAKVKRLVLTHM 220 >gi|309781470|ref|ZP_07676206.1| hydrolase [Ralstonia sp. 5_7_47FAA] gi|308919883|gb|EFP65544.1| hydrolase [Ralstonia sp. 5_7_47FAA] Length = 319 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 83/268 (30%), Gaps = 51/268 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K +LG + G PT KNR + + + + + +VD G Sbjct: 38 KKGTRLILLGT--AGG------------PTPKKNRSAPAQVIVI------NGVSYVVDCG 77 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q + + I V TH H+DH G L + P+D + P Sbjct: 78 NGVARQYVTAGLKLKDIRHVFLTHQHSDHNADYGTLMLLAWATDLTGPVDAWGPPPLAAM 137 Query: 118 L---FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SS 173 E + Y + P + P++ + + ++ L +H + + Sbjct: 138 TTKFLELYDYDIRTRIADEGRPPLAPMIHPHEISEGGLVMQDANVKVTSALVKHPPVSPA 197 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKN 211 FRF ++ D + D L+ +D L+ Sbjct: 198 FAFRFDSADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTEPNAKTLRE 256 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 L +SH S E + K +L+H Sbjct: 257 HLLASHTSTDEVGRIATEAKVKTLVLSH 284 >gi|85708124|ref|ZP_01039190.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1] gi|85689658|gb|EAQ29661.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1] Length = 352 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 33/224 (14%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYT 82 G P +R +L + + +VD G + ++ + S A+L T Sbjct: 53 CGTGSPLPNPDRAGPCNLVV------AGDQAYVVDIGEGGARNLNLMGYFIPSTTALLLT 106 Query: 83 HPHADHIHGIDGLRGYFLKQK---RPIDVYAAPDCMKHLFESFR--------YCFKALDD 131 H H+DH+ GI L + Q P+ V+ + L E F Y + Sbjct: 107 HYHSDHVDGIGPLSLLYWTQGTKTAPLPVHGPQG-LNVLVEGFNRAYELDRTYRVEHHTS 165 Query: 132 RTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFRFG----NVAY 183 P + I E + P+ + GG + H + S+G+RF ++ Sbjct: 166 EIVPETGGGLTAIPFEIGEQPVTVIERGG-LRITAFRVDHDPVRPSVGYRFDYKGRSIVI 224 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKI 227 D + + D L+ DAL+ L ++++L + Sbjct: 225 SGDAAK-SDSIAKAARGADILVHDALQPRL---VGHITDALDEA 264 >gi|148257540|ref|YP_001242125.1| pyrroloquinoline quinone biosynthesis protein PqqB [Bradyrhizobium sp. BTAi1] gi|146409713|gb|ABQ38219.1| pyrroloquinoline quinone biosynthesis protein B [Bradyrhizobium sp. BTAi1] Length = 309 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 62/177 (35%), Gaps = 30/177 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN---PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A GVP+ C P+ R +++S+ +S +++ Sbjct: 2 LRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEIRNSQASVAVSADGANW----FLINAS 57 Query: 62 PDFYMQ------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q LR I V+ T+ D I G+ +R + P ++ Sbjct: 58 PDLRQQVTSTPQLHPKPGALRH--SPIAGVILTNGEIDAITGLLSMR-----ESSPFSIH 110 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 A P + L + F L D T + PIVI+ P+ A +E Sbjct: 111 AHPKVLAILRSNN--IFDVLKDETVKRV--PIVIDVPFRPLLQDGAPSGLEVTAFAV 163 >gi|327314526|ref|YP_004329963.1| metallo-beta-lactamase domain-containing protein [Prevotella denticola F0289] gi|326945939|gb|AEA21824.1| metallo-beta-lactamase domain protein [Prevotella denticola F0289] Length = 266 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + VL TH HADH+ + + G + Sbjct: 21 GTDCLMIDCGVGIRSLKKHFHNYGLQLSMVHNVLITHDHADHVKSVGSISG-----DLHL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + + + +C + D + +++ ++ G P Sbjct: 76 PVYTTEDVHRGISRN--WCVRRKIDS----QLAKNLVKGKEI------MIGAFHVTPFGV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ TD + + ++L+I+A L+ G + Sbjct: 124 PHDSTDCVGYSIECGGIRFTLVTDCGHITEDIAHYISISNYLVIEANHEPEKLEAGPYPR 183 Query: 217 HF---------SLSE---SLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H LS + +E +P + L H+ + ++ + K T Sbjct: 184 HLKKRISGPDGHLSNEACAKALVENASPALRYVWLCHLSDENNHPELAKKT 234 >gi|15596209|ref|NP_249703.1| hypothetical protein PA1012 [Pseudomonas aeruginosa PAO1] gi|116048940|ref|YP_792259.1| hypothetical protein PA14_51250 [Pseudomonas aeruginosa UCBPP-PA14] gi|9946922|gb|AAG04401.1|AE004533_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115584161|gb|ABJ10176.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa UCBPP-PA14] Length = 252 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + +E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPVELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGVATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + ++ ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLS 213 >gi|332178399|gb|AEE14088.1| hypothetical protein Thena_0447 [Thermodesulfobium narugense DSM 14796] Length = 261 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 78/220 (35%), Gaps = 51/220 (23%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T ++D G + ++ L +V IDAV TH HADH+ G++ F + Sbjct: 21 RMGGYTFLIDIGVNCSYLKRSLESLHLRVEDIDAVFITHEHADHVRGLE----VFARNYC 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+ C + + + N + + ++ Sbjct: 77 NIPVFIREKCFNEVLKR-------------------VESRNCFQILTDEVKFDNVKVSFF 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H I +G+ F +Y TD+ ++ + D L++++ LKNG + Sbjct: 118 STPHDAIDPIGYEFSCRDFCFSYITDLGEVTSDVKCAIDKSDLLVLESNHDIEMLKNGSY 177 Query: 215 S-----------SHFSLSE-SLKKIE-LINPKNAILTHMH 241 H S + +L + I +N +L H+ Sbjct: 178 PYYLKKRILSSNGHLSNKDAALALLNSKIKKRNIVLAHLS 217 >gi|329922729|ref|ZP_08278281.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] gi|328942071|gb|EGG38354.1| metallo-beta-lactamase domain protein [Paenibacillus sp. HGF5] Length = 245 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 95/251 (37%), Gaps = 36/251 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 +LG G KN ++ I N T+++D G Sbjct: 2 TLTLQMLGTG----------------SAFAKNY-YNNNALI-----HDGNFTLLIDCGIT 39 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLF 119 + + + +DAVL TH HADH+ G++ L + +K K R + +Y A ++ ++ Sbjct: 40 APLALHQMNKTFNDVDAVLITHIHADHVGGLEEL-AFIMKMKYNRKLPLYIADALVEPIW 98 Query: 120 ES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 E ++ + + + ++ S+G +E I G+ S + Sbjct: 99 EHTLKGGLYQHGHISSLQDVFDVHPLKPGVKAAI--SSGISVELIHTQHIPGKDSYSLYL 156 Query: 178 FGNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 + Y D+ F L++L ++ + ++ + G H +L E L + I + Sbjct: 157 NDRIFYSADMV-FDPILLKQLVNERDCEVILHECQLQGPGEVHTTLDELLSLPQEIQ-ER 214 Query: 235 AILTHMHVDLD 245 L H +++ Sbjct: 215 TYLMHYSDEVE 225 >gi|299065910|emb|CBJ37090.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia solanacearum CMR15] Length = 320 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 83/264 (31%), Gaps = 51/264 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 43 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 82 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHL--- 118 Q + + +I V TH H+DH G L + P+D + P + Sbjct: 83 RQYVSAGLKLKAIRHVFITHQHSDHNADYGALMLLAWGTDLTGPVDTWGPPPLAEMTTKF 142 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 E + Y + P + P++ + + ++ L +H + + +R Sbjct: 143 LELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYR 202 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLHS 215 F ++ D + D L+ +D L+ L + Sbjct: 203 FDAADRSIVISGDTAP-SENLVRLAHGADVLVHEVMHLPSLDKLLATERNATTLREHLLA 261 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 SH S + + K +L+H Sbjct: 262 SHTSAEDVGRIATEAKVKTLVLSH 285 >gi|88807424|ref|ZP_01122936.1| Ribonuclease Z [Synechococcus sp. WH 7805] gi|88788638|gb|EAR19793.1| Ribonuclease Z [Synechococcus sp. WH 7805] Length = 323 Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 69/215 (32%), Gaps = 37/215 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Q LR + + V TH H DH+ G+ +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLSGSSSGVDLYGPDPLDAYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 R + YP V+P+ I + + A P+ H R+ + +R Sbjct: 102 VLR---TSSTRIGYPLAVHPVRGAAEAGRIVFEDDDLQVRATPL---HHRVPAYAYRVDQ 155 Query: 180 -------NVAYCTDVNAFPAESLEKLQNLDFLIID 207 +VA D+N P L+ + + +D Sbjct: 156 KPRAGRFDVARARDLNISPGPVYAALKRGETVTLD 190 >gi|315151777|gb|EFT95793.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0012] Length = 260 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLESFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|209521132|ref|ZP_03269860.1| beta-lactamase domain protein [Burkholderia sp. H160] gi|209498442|gb|EDZ98569.1| beta-lactamase domain protein [Burkholderia sp. H160] Length = 257 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 61/215 (28%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S T V++D G L +DA+L TH H+DHI Sbjct: 14 ALLVEAHSGASTTRVLLDCGFSAREVERRLTRLGASAEHLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + ++ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADEADVDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GELSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGTSTPHISAVLSGCDALVLECNHDV 170 Query: 209 -----LKNGLH--------SSHFSLSESLKKIELI 230 + H + + + + + Sbjct: 171 QMLAGSRYPPSLKARIGGDHGHLNNDAAAEILASL 205 >gi|77464367|ref|YP_353871.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodobacter sphaeroides 2.4.1] gi|77388785|gb|ABA79970.1| putative coenzyme PQQ synthesis protein B [Rhodobacter sphaeroides 2.4.1] Length = 300 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 27/172 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G+P+ + C P R + +L S E +V+ P Sbjct: 2 LRIIVLGSAAGGGLPQWNCNCAGCRAARAEPALRNGQCALAASADGESW----FLVNASP 57 Query: 63 DFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L R + I V+ T+ D + G+ L++ P ++A PD Sbjct: 58 DLRQQILDTPALHPRHGLRHSPIAGVILTNAEVDAVAGL-----LTLREGWPFAIHAHPD 112 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++ L + P + P + P A G + + Sbjct: 113 VLEVLAAN-------PIFGVLRPEIVPRRPMRPETPFEPVLACGRASGLTVR 157 >gi|227524020|ref|ZP_03954069.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227088759|gb|EEI24071.1| metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 251 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 72/224 (32%), Gaps = 40/224 (17%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHG 91 P N SS + N ++D G + + L +DA++ TH H DH Sbjct: 18 PANGNGTSSYLLE-----SGNFHFLIDCGSAALLSLEEILDPLKLDALILTHYHHDHTAD 72 Query: 92 IDGLRGYF-----LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 + L+ Y+ ++ + +Y LD + + P + Sbjct: 73 VGVLQYYWQLHEKRYDQKCLPIYG----------------HTLDKINFDGLSWPDSTKGV 116 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQN 200 + G H + + G R + + D FP + +N Sbjct: 117 AYDPEKQLNVGPFSITFFKMHH-PVPAFGLRITEKATGKVLVFTADTAYFPEIAY-FARN 174 Query: 201 LDFLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHM 240 D L+ D + H + +ES + + K +LTH+ Sbjct: 175 ADLLMTDT-NFYADKTGTKWHMTSTESGQLAKDAEAKRLLLTHL 217 >gi|145591911|ref|YP_001153913.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145283679|gb|ABP51261.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 235 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 69/201 (34%), Gaps = 23/201 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + ++ +++D G Y ++ + + D V +H H DHI G+ Sbjct: 20 TSLYVR------TDVGILLDAGECTYARLAQCGLSWPDVVFISHRHGDHILGLPTFMLMA 73 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-VIENNDVPICMKSAGGV 158 + + + V A + ++ + Y V + + + Sbjct: 74 RRVGKKLRVVADRETLEA-AAELARLVGIENSLPYVEFVEASGSVTIGETKLTFAPTSHP 132 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGL 213 ++ + + +HG + Y +D +E + D LI + + Sbjct: 133 VQTLAVRIEHGGKCA--------VYSSDTAP-SDNIVELARGCDLLIHEVSGNPGQEEEA 183 Query: 214 HS-SHFSLSESLKKIELINPK 233 H H + +++++ + + Sbjct: 184 HRVGHSTTADAVEIAKRAGVR 204 >gi|76801770|ref|YP_326778.1| hypothetical protein NP2254A [Natronomonas pharaonis DSM 2160] gi|121708247|sp|Q3IRM5|RNZ_NATPD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|76557635|emb|CAI49218.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 308 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 82/291 (28%), Gaps = 75/291 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG S VP R +S V R ++ D G Sbjct: 2 SLRVTFLGT--SGAVPT---------------TRRNTSA----VFLRREGDRMLFDCGEG 40 Query: 64 FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q++R ++ TH H DHI G+ GL F ++ P+ VY L + Sbjct: 41 TQRQMMRFGTGFAVSKAFITHLHGDHILGLPGLLQTMDFNDREEPLSVYVPSGKQAELRD 100 Query: 121 ---------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--------------- 156 SF + D + I + +S G Sbjct: 101 LIDTAAGAPSFPVHVNGVSDGQVVVDADDYEIRAFETDHDARSLGYALIEASRKGRFDRE 160 Query: 157 -----GVIEAIPILQQH---------GRISSLGFRFGN------VAYCTDVNAFPAESLE 196 GV Q H G + G+ V Y D ++ Sbjct: 161 RAEELGVPVGPKFQQLHAGEAVELEDGTVVEPEQVVGDPRPGRRVVYTGDTRP-TDRTVT 219 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D LI DA ++H + +E+ + + L H+ Sbjct: 220 VAENADLLIHDATFATDNADRAARTAHSTAAEAADIASRADARRLALVHIS 270 >gi|19113935|ref|NP_593023.1| tRNA endonuclease Trz2 (predicted) [Schizosaccharomyces pombe 972h-] gi|1723232|sp|Q10155|RNZ1_SCHPO RecName: Full=Probable ribonuclease Z 1; Short=RNase Z 1; AltName: Full=tRNA 3 endonuclease 1; AltName: Full=tRNase Z 1 gi|1177343|emb|CAA93219.1| tRNA endonuclease Trz2 (predicted) [Schizosaccharomyces pombe] Length = 809 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 106/305 (34%), Gaps = 65/305 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG-------SNTTVI 57 LG G+++ P R SS + ++ S ++ Sbjct: 498 IQICTLGTGSAM----------------PSLYRNVSSTYVRIPVDKKCMEDSAISMKNIL 541 Query: 58 VDTGPDFYMQV-------LREQVLSIDAVLYTHPHADHIHG-IDGLRGYFLKQKRP--ID 107 +D G ++ L+ ++ S+ + +H HADH G I L+ + + Sbjct: 542 LDCGEGTLGRLSRQYGDNLKYEIASLRWIYISHMHADHHAGVIGVLKAWTKYSDGRSKLF 601 Query: 108 VYAAPDCMKHLFE--SFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + A P L E Y + + P +E++ + K ++ Sbjct: 602 ITAPPQFEFWLLEYSRIDYLPLSNIVFISNSALRTDRKPSALESSRLSSLFKEF-DLVSF 660 Query: 162 IPILQQHGRIS-------SLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA-LKNG 212 + H S S G++ AY D P+E + ++ LI +A L++ Sbjct: 661 RTVPAIHCPYSYCMEITNSSGWKI---AYSGDTR--PSEDFANIAKDSTLLIHEATLEDS 715 Query: 213 LH-----SSHFSLSESLKKIELINPKNAILTHMHVD----LDYDMVLKSTPSRVVPAFDG 263 +H H + SE+L+ + KN ILTH D D+ + + AFDG Sbjct: 716 MHEIAIKKQHSTYSEALEVAKKAGTKNVILTHFSQRYPKLPDIDISTEDL--HIALAFDG 773 Query: 264 MQFSS 268 M Sbjct: 774 MTLKI 778 >gi|255028260|ref|ZP_05300211.1| hypothetical protein LmonL_01644 [Listeria monocytogenes LO28] Length = 165 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S I ++ + + HG + S G+R Sbjct: 103 SL----------RLSGTRLTYKINFEEIEPGVIFEDKMFIVTADDLDHG-VRSFGYRI 149 >gi|299821106|ref|ZP_07052994.1| metallo-beta-lactamase YycJ [Listeria grayi DSM 20601] gi|299816771|gb|EFI84007.1| metallo-beta-lactamase YycJ [Listeria grayi DSM 20601] Length = 276 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 82/272 (30%), Gaps = 79/272 (29%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ ++VD G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILVDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R ++ +DA+L TH H DHI G+ + +K + V+A Sbjct: 44 LSGKKIEGLFEQVGR-KMSDLDAILVTHEHVDHIKGLG-----VIARKYKLPVFANQKTW 97 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + I + + + G ++ H I + Sbjct: 98 QAMDSM---------------IGEVNSDQKFHFDMETVKSFGSLQVESFGVSHDAIEPMF 142 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS---------- 215 + F TD ++ D +L I+ L+ G + Sbjct: 143 YIFHSGDKKFVMITDTGYVSDRMKGHIKGADAYLFESNHDIEMLRMGRYPWNVKRRILGD 202 Query: 216 -SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ I + K L H+ D Sbjct: 203 EGHVSNEDAGIAISEVITDKTKRIYLGHLSKD 234 >gi|146276439|ref|YP_001166598.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodobacter sphaeroides ATCC 17025] gi|145554680|gb|ABP69293.1| coenzyme PQQ biosynthesis protein B [Rhodobacter sphaeroides ATCC 17025] Length = 300 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 22/172 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G+P+ + C P R + +L S E +++ P Sbjct: 2 LRIIVLGSAAGGGLPQWNCNCAGCREARDKPALRNGQCALAASADGEHW----FLINASP 57 Query: 63 DFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L RE + I V+ T+ D + G+ L++ P ++A PD Sbjct: 58 DLRQQILDTPALHPREGLRHSPIAGVVLTNAEVDAVAGL-----LTLREGWPFAIHAHPD 112 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + L + F L D P + + + +G I + + Sbjct: 113 VLSVLAANP--IFGVLRDEIVPRRAMLPEVPFEPLLADGRPSGLTIRSFTVP 162 >gi|311030610|ref|ZP_07708700.1| ribonuclease Z [Bacillus sp. m3-13] Length = 306 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 58/181 (32%), Gaps = 38/181 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+ GVP + S + ++ + + D G Sbjct: 1 MKLTFLGTGS--GVPA---------------KHRNVSSLALHIDDK-EGSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFE 120 Q+L + I + TH H DHI G+ GL Q VY +++ Sbjct: 43 QHQILHTSLKPRKISKIFITHLHGDHIFGLPGLLSSRSFQGGDTPLTVYGPVGIKEYIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIEN---NDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 S R ++ YP I+ + + +K HG I S GFR Sbjct: 103 SLR---VSMTHVKYPLIIEEFEEDGLFLEEEDFTIKGK---------KLVHG-IPSFGFR 149 Query: 178 F 178 Sbjct: 150 I 150 >gi|94971145|ref|YP_593193.1| hypothetical protein Acid345_4119 [Candidatus Koribacter versatilis Ellin345] gi|94553195|gb|ABF43119.1| conserved hypothetical protein [Candidatus Koribacter versatilis Ellin345] Length = 284 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 78/260 (30%), Gaps = 50/260 (19%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSI--DAVLYTHPHADHIHGIDGLRG-- 97 S V R + + D G F Q+++E V +H H DHI GI Sbjct: 27 SCVEVRVNGQIFVFDCGTGFRNLGKQLIKEYAEKPIQAHVFISHFHWDHIQGIPFFTPLY 86 Query: 98 ------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 +F + + + E + +D N IE + + Sbjct: 87 EKEDNYFFFHSSNR-----SRGLQRAIEEQMADPYFPVDMSEMAAHRNFYDIEEDRIAFD 141 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD----VNAFPAESLEKLQNLDF 203 P LGFR G + Y TD F + + D Sbjct: 142 DAIVQSKWLNHP-------QGCLGFRMETEDGILVYATDNEPGHPVFDKNVRKLAEGADI 194 Query: 204 LIIDA--LKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMV------- 249 LI DA L + + H E++ + K +L H D D++ Sbjct: 195 LIYDAQYLPDEYAAKKVGWGHSHWREAVNIVMESGAKELVL--FHHDPDHNDACVDSIVK 252 Query: 250 -LKSTPSRVVPAFDGMQFSS 268 + V A +GM+ S Sbjct: 253 SARDYYPSVRAASEGMEISV 272 >gi|315301285|ref|ZP_07872503.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] gi|313630345|gb|EFR98260.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] Length = 276 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 56/249 (22%) Query: 39 RSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + ++VD G + QV R + +DA+L TH H+D Sbjct: 16 RFSILASGSSGNATLVETGDQKILVDCGLSGKKMEGLFAQVGR-DMSDLDAILITHEHSD 74 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ L +K + +YA K + I + Sbjct: 75 HIKGLG-----VLARKYKLPIYANAKTWKAMDNM---------------IGEVSSDQKFQ 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD- 202 + + G ++ H I + + F TD + D Sbjct: 115 FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADA 174 Query: 203 FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 +L ++ L+ G + H S + ++ E+I K L H+ D Sbjct: 175 YLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKD 234 Query: 244 LDYDMVLKS 252 + + + Sbjct: 235 NNMKELARM 243 >gi|153952779|ref|YP_001393544.1| hydrolase [Clostridium kluyveri DSM 555] gi|146345660|gb|EDK32196.1| Predicted hydrolase [Clostridium kluyveri DSM 555] Length = 262 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 78/231 (33%), Gaps = 50/231 (21%) Query: 52 SNTTVIVDTG---PDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G + +L+ IDA+L TH H DHI G+ L +K I Sbjct: 20 DNTKILVDAGLSGKNIETALLKIGFNPNEIDAILVTHEHTDHIKGVG-----VLSRKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + Y + I+ V + ++ Sbjct: 75 PIYANALTWQCMLK-------------YIGKIKEHNIK---VLYNNHISIKDMDITSFST 118 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + G+ TD+ E L++ D +++++ LK G + Sbjct: 119 SHDAVDPYGYAIDCKNKRACVATDLGFISDEIKYILKDSDIILLESNHDVEMLKFGPYPY 178 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + K I I K IL H+ +Y + T Sbjct: 179 DLKRRILSKIGHLSNDDCGKAILNIINNKFKKIILGHLSKTNNYPELAYQT 229 >gi|16078088|ref|NP_388905.1| metal-dependent hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|221308862|ref|ZP_03590709.1| hypothetical protein Bsubs1_05686 [Bacillus subtilis subsp. subtilis str. 168] gi|221313186|ref|ZP_03594991.1| hypothetical protein BsubsN3_05617 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318109|ref|ZP_03599403.1| hypothetical protein BsubsJ_05566 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322384|ref|ZP_03603678.1| hypothetical protein BsubsS_05672 [Bacillus subtilis subsp. subtilis str. SMY] gi|321314748|ref|YP_004207035.1| putative metal-dependent hydrolase [Bacillus subtilis BSn5] gi|81555758|sp|O07607|YHFI_BACSU RecName: Full=Uncharacterized protein yhfI gi|2226242|emb|CAA74530.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] gi|2633360|emb|CAB12864.1| putative metal-dependent hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|320021022|gb|ADV96008.1| putative metal-dependent hydrolase [Bacillus subtilis BSn5] Length = 244 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 33/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + + +++VD G ++ +DAV+ +H H DHI I L+ + K Sbjct: 25 QSGDYSLLVDCGSAVLSKLFGYVPAEKLDAVVLSHYHHDHIADIGPLQFAKQVGSFLGKG 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y ++ F+ L +T+ + D P+ G Sbjct: 85 EHTLPIYGHDADIEQ--------FQKLTYKTHTKGIAYQ----PDQPLT----AGPFTIT 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H ++ R + V Y D +++ + ++ D LI + ++G Sbjct: 129 FLKTIH-PVTCYAMRITDGSHTVVYTAD-SSYQDSFIPFSKDADLLISECNFYADQDGTS 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + E+ + + +LTH+ +D + K Sbjct: 187 AGHMNSLEAGRIAKEAGAGELLLTHLPHFGVHDNLRKE 224 >gi|219853444|ref|YP_002470566.1| hypothetical protein CKR_0101 [Clostridium kluyveri NBRC 12016] gi|219567168|dbj|BAH05152.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 267 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 78/231 (33%), Gaps = 50/231 (21%) Query: 52 SNTTVIVDTG---PDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G + +L+ IDA+L TH H DHI G+ L +K I Sbjct: 25 DNTKILVDAGLSGKNIETALLKIGFNPNEIDAILVTHEHTDHIKGVG-----VLSRKYNI 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + Y + I+ V + ++ Sbjct: 80 PIYANALTWQCMLK-------------YIGKIKEHNIK---VLYNNHISIKDMDITSFST 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + G+ TD+ E L++ D +++++ LK G + Sbjct: 124 SHDAVDPYGYAIDCKNKRACVATDLGFISDEIKYILKDSDIILLESNHDVEMLKFGPYPY 183 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + K I I K IL H+ +Y + T Sbjct: 184 DLKRRILSKIGHLSNDDCGKAILNIINNKFKKIILGHLSKTNNYPELAYQT 234 >gi|330830220|ref|YP_004393172.1| Arylsulfatase [Aeromonas veronii B565] gi|328805356|gb|AEB50555.1| Arylsulfatase [Aeromonas veronii B565] Length = 319 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 103/294 (35%), Gaps = 56/294 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + +LG G P + R SS I + +++D G Sbjct: 33 KTFTLQVLGSGG----PI------------SDDLRASSSEVIWWKG----KSRILIDAGG 72 Query: 63 DFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP------ 112 Y++ + + +D + TH H DH+ + L YF ++ P+D+ Sbjct: 73 GVYLRFGQAGAKLEEVDFIGITHFHTDHVTDLPALLKGAYFFERSDPLDLAGPEAGSAFP 132 Query: 113 -------DCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++ Y FK D +P ++ + +N + G I A+ Sbjct: 133 SMSGYFDALFNKDKGAYAYLSGFKDGTDGLFPITLHDVPYQNPQPHTVYQQDGLTITALG 192 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSS-- 216 I HG + L +R G + D N + + D L++ A+ G S Sbjct: 193 IP--HGDVPCLAYRIESAEGTIVISADQNGSNPAFVPFAKGADILVMPLAIHEGADSVSA 250 Query: 217 --HFSLSESLKKIELINPKNAILTH-MHVDLDY-----DMVLKSTPSRVVPAFD 262 H S K +NPK +L H M V L++ +V + ++V A D Sbjct: 251 SLHAKPSVVAKIAAEVNPKLLVLNHWMGVGLNHKKEAMAIVKQQFHGQIVAARD 304 >gi|187935301|ref|YP_001887696.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723454|gb|ACD24675.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 263 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 85/240 (35%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTG-PDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G P ++ + + +D + TH H+DHI G+ L +K I Sbjct: 20 EKSKILIDAGLPGKRIDEALKSINQSPNDLDGIFVTHEHSDHIKGVG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + I+ D + ++ Sbjct: 75 PIYANSNTWNAM-------------ESLIGKIKEHNIKVIDK--RSVTQIKDLDVKAFNI 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H IS +G+ N V+ TD+ F E + ++ + +++++ LK G + Sbjct: 120 PHDSISPMGYTIANKDKKVSVATDLGTFTKEIYDNIKESEIILLESNHDVSMLKYGPYPY 179 Query: 216 ----------SHFSLSESLKKI-ELIN---PKNAILTHMH-----VDLDYDMVLKSTPSR 256 H S + + I E++ K IL H+ DL Y V+ Sbjct: 180 SLKRRILSEIGHLSNDDCGEAIVEILKNGFNKKVILGHLSSTNNQPDLAYQTVVNVLREN 239 >gi|312116165|ref|YP_004013761.1| coenzyme PQQ biosynthesis protein B [Rhodomicrobium vannielii ATCC 17100] gi|311221294|gb|ADP72662.1| coenzyme PQQ biosynthesis protein B [Rhodomicrobium vannielii ATCC 17100] Length = 302 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 103/307 (33%), Gaps = 56/307 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG A G P+ + +P RRT+SSL +S ER VIV+T PD Sbjct: 5 VLGSAAGGGFPQWNCNARVSRLAWDDPALRRTQSSLAVSPDGER----FVIVNTSPDLRT 60 Query: 67 QVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+L + I+A+ T+ D I G+ L++++ + +YA+ + Sbjct: 61 QILDNRELWPRRRGSARNSPIEALFLTNADVDAIAGL-----LTLRERQRLRLYASEAVL 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENND----VPICMKSAGGVIEAIPILQQHGRI 171 + + + ALD +V + D P + + P + Sbjct: 116 ATIGDDRIFDVLALDLVERIAVVPGEKVTPLDGLTFEPFAVPGKIPLYREQPDEVPETGV 175 Query: 172 ---SSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------------- 209 ++G R G + Y + + L+++ L D Sbjct: 176 MSGETIGLRISDREGGTLFYIPGCASINKDLLDRVDGAACLFFDGTVYNDGELRDADVGE 235 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKST--PSRVVPAF 261 + H SL + I H++ LD + T + A Sbjct: 236 KTGRRMGHVPIMGPGGSLNAFAPAKIQRKIYIHINTTNPILDPNSAAAMTVREAGWEIAA 295 Query: 262 DGMQFSS 268 DGM F+ Sbjct: 296 DGMSFTL 302 >gi|213402981|ref|XP_002172263.1| ribonuclease Z [Schizosaccharomyces japonicus yFS275] gi|212000310|gb|EEB05970.1| ribonuclease Z [Schizosaccharomyces japonicus yFS275] Length = 755 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 104/300 (34%), Gaps = 63/300 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSS--LKISRVSERGSNTTVIVDTGP 62 LG G+++ P R S+ L+I E +++D G Sbjct: 455 IQLITLGTGSAM----------------PSLYRNVSANLLRIPIFGETNKTYNILLDCGE 498 Query: 63 DFYMQVLR-------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV------- 108 ++ R E++ ++ + +H HADH G++G+ + K P V Sbjct: 499 GTLGRMARQFGDRLTEELAALRWIYISHMHADHHAGVNGILQAWAKVTEPDQVLFITAPQ 558 Query: 109 ----YAAPD-CMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + + L + + P I E + + ++ G+ + Sbjct: 559 AFYNWLSEYATLDSLPMDRVVFINNTALRNDRPNITEACSREISH----LFNSLGLNSLL 614 Query: 163 PILQQHGRIS-SLGFRFGN---VAYCTDVNA-FPAESLEKLQNLDFLI-----IDALK-- 210 + H S + F N +AY D P ++ N D LI D ++ Sbjct: 615 TVPAIHCAYSFCVAFTLSNGCKIAYSGDTRPCLPFCNIGF--NADLLIHEATLEDTMQDI 672 Query: 211 --NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY--DMVLKSTPSRVVPAFDGMQF 266 H +H E+L + + KN +LTH D+ ++S V AFDGM Sbjct: 673 AIKKQHCTH---KEALDIAKQMQAKNVVLTHFSQRYPKLPDVHIESDSPNVALAFDGMAI 729 >gi|110667983|ref|YP_657794.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] gi|109625730|emb|CAJ52163.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] Length = 304 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 93/296 (31%), Gaps = 78/296 (26%) Query: 13 GASLGVP--RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 G S GVP + + ++ ++ ++ D G ++++ Sbjct: 7 GTSGGVPTSQYGTSC----------------IYLNVFGDK-----ILFDCGEGSQQRLMK 45 Query: 71 EQV-LSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAA----PDCMKHLFESFR 123 ++DAV +H HADH G+ GL +++R +D+Y + + ++ Sbjct: 46 YNSSPNVDAVFISHFHADHTLGLPGLIQALEMDERERSLDIYVPEQRRQRAIDMITGAYE 105 Query: 124 YCFKALDDRTY---PPIVNP--IVIENNDVPICMKSAGGVIE----------------AI 162 + ++ + Y P ++ + P S G ++ Sbjct: 106 WPSYPVEIQGYESDEPAIHTEDYTVHPFKTPYTEHSHGFSVQEASKQEFLVEKAQALGVD 165 Query: 163 PILQQ------HGRISSLGFRFG------------NVAYCTDVNAFPAESLEKLQNLDFL 204 P + H + G + Y D ++ N L Sbjct: 166 PGPKYGKLQDGHTVETDDGDTIEPEDVLSDPMPGRKIVYTGDTRP-SDAIVDAASNASLL 224 Query: 205 IIDAL-----KNGLHSS-HFSLSESLKKIELINPKNAILTHMH--VDLDYDMVLKS 252 I A+ HS+ H + SE+ + N + LTH+ + D + Sbjct: 225 IYSAMFTEAQAKRAHSTGHSTASEAAQVASKSNSEKIWLTHISPRHEGDEQKLESQ 280 >gi|323351213|ref|ZP_08086869.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] gi|322122437|gb|EFX94148.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis VMC66] Length = 266 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 93/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H + +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAVCPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|297171744|gb|ADI22736.1| metal-dependent hydrolases of the beta-lactamase superfamily I [uncultured verrucomicrobium HF0500_27H16] Length = 226 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 54/205 (26%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E++ ++DA+ TH H+DH G+ GL Y R + +A D + + ++ + Sbjct: 7 ERIENVDAIFITHEHSDHATGVKGLSRY-----RHLKFFANEDTARAIQKNLK------- 54 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----------- 179 + + +E P H +GF FG Sbjct: 55 ----------LGADWKLFTTGCSFTFQDLEISPFAIPHDAYDPVGFLFGWGENDLFNPVR 104 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDA---------LKNGL---------HSSHFSLS 221 +A+ TD+ P +K++++D+L+I+A K H S Sbjct: 105 KLAWLTDLGYVPRLVHQKIRDVDYLVIEANHDVQMLETSKRRPWSLKQRILGRHGHLSNK 164 Query: 222 ESLKKIELI-NPK--NAILTHMHVD 243 +L ++ NPK L H+ D Sbjct: 165 AALDLLQKADNPKWRKVFLAHLSRD 189 >gi|91776480|ref|YP_546236.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91710467|gb|ABE50395.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] Length = 254 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 33/219 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + + +++D G L Q+ +I V TH H DHI + L Sbjct: 19 TSLLV--------DGDILIDAGTGVGDLTL-AQMSTISHVFLTHAHLDHIAFLPLLLDAV 69 Query: 100 L-KQKRPIDVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSAG 156 L K+++P+ V+A P+ + L + F D P +++ + + ++ Sbjct: 70 LGKREQPVTVHALPETIASLK---AHIFNGHIWPDFNQIPTPEQPLLQYAPITVGDEAEI 126 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA--ESLEKLQNLDFLIID--- 207 + + H + ++G+ G++A+ D + + L + NL LII+ Sbjct: 127 AGRRIVALPANHS-VPAVGYLLGSGSGSLAFTGDTTSCDEFWQVLNQAGNLRHLIIEVSF 185 Query: 208 -----ALKNGLHSSHFSLSESLKKIELINPK-NAILTHM 240 AL H H+ + L ++ + P+ +TH+ Sbjct: 186 TDAEIALALVSH--HYCPALLLNGLDRLKPRPEVWVTHL 222 >gi|291483499|dbj|BAI84574.1| hypothetical protein BSNT_01740 [Bacillus subtilis subsp. natto BEST195] Length = 244 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 33/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + + +++VD G ++ +DAV+ +H H DHI I L+ + K Sbjct: 25 QSGDYSLLVDCGSAVLSKLFGYVPAEKLDAVVLSHYHHDHIADIGPLQFAKQVGSFLGKG 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y ++ F+ L +T+ + D P+ G Sbjct: 85 EHTLPIYGHDADIEQ--------FQKLTYKTHTKGIAYQ----PDQPLT----AGPFTIT 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H ++ R + V Y D +++ + ++ D LI + ++G Sbjct: 129 FLKTIH-PVTCYAMRITDGSHTVVYTAD-SSYQDSFIPFSKDADLLISECNFYADQDGTS 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + E+ + + +LTH+ +D + K Sbjct: 187 AGHMNSLEAGRIAKEAGAGELLLTHLPHFGVHDNLRKE 224 >gi|288921255|ref|ZP_06415539.1| beta-lactamase domain protein [Frankia sp. EUN1f] gi|288347345|gb|EFC81638.1| beta-lactamase domain protein [Frankia sp. EUN1f] Length = 248 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 52/252 (20%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGC G G P SS I R +++D G Sbjct: 1 MKLTILGCSGTYPG-PASAC----------------SSYLIEHDGFR-----LVLDAGNG 38 Query: 64 FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMK 116 ++ + +DAVL +H H DH +D + + ++ P + VY + + Sbjct: 39 SVGELQNHCDIRDVDAVLLSHLHGDHC--LDLVATSYARRYHPEGMPPKLPVYGPINTQE 96 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L F+ D + I + I + G H I + G Sbjct: 97 RLCG----AFERWPDDSLADIYDFRTIGPG------RLHIGPFGIDLARVAH-PIEAYGV 145 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + Y D A + Q D + +A ++ H + ++ + Sbjct: 146 RINAGGRTLTYSGDTGAC-DRLVRLAQGSDLFLCEASFLDGEDNPPDLHLTGKDAGEHAT 204 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 205 RADVGRLVLTHL 216 >gi|314934939|ref|ZP_07842298.1| metallo-beta-lactamase family protein YycJ [Staphylococcus caprae C87] gi|313652869|gb|EFS16632.1| metallo-beta-lactamase family protein YycJ [Staphylococcus caprae C87] Length = 263 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 51/243 (20%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 19 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + + AG IE+ Sbjct: 73 YNLPIYANENTWKAIEK----------KDSRIPMDQKFIFKPYE---TKSIAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F N TD ++ D + +D L+ Sbjct: 118 YNVSHDAIDPQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFMFESNHDVDMLRMCR 177 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H S ++ L ++I N K L+H+ D + + + + +V+ Sbjct: 178 YPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN 237 Query: 260 AFD 262 +D Sbjct: 238 EYD 240 >gi|290473490|ref|YP_003466359.1| binuclear zinc phosphodiesterase [Xenorhabdus bovienii SS-2004] gi|289172792|emb|CBJ79563.1| binuclear zinc phosphodiesterase [Xenorhabdus bovienii SS-2004] Length = 304 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 92/291 (31%), Gaps = 74/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R +SL + R N + D G Sbjct: 1 MELKFLGT--SAGVPT--------------KERNVTSLVLDLRGIR--NALWMFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAAP------D 113 Q+L ++ ++ + TH H DHI G+ GL P+ +Y + Sbjct: 43 QHQILNSSIKIPKLEKIFITHLHGDHIFGLPGLLC-SRSMGGSTDPVTLYGPKGIRQFVE 101 Query: 114 CMKHLFESF------------RYCFKALDDRTYPPIVNPIV------IENNDVPICMKSA 155 L SF F + + +N V IE +D P + + Sbjct: 102 TTLQLSGSFLTYPLDIVEVQSGLLFDDGELKVTAYALNHRVECYGYRIEEHDKPGGLNTQ 161 Query: 156 GGVIEAIP-------------ILQQHGRISS----LGFRF--GNVAYCTDVNAFPAESLE 196 + IP + + GR LG ++A D P L+ Sbjct: 162 RLNQDNIPRGSWMQTLKQGGTVTLEDGRTVCGKDYLGAPISGKSLAIFGDTTPTPEA-LK 220 Query: 197 KLQNLDFLI-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMH 241 N+D ++ DAL +++ H + ++ K+ I TH+ Sbjct: 221 LAANVDVMVHEITLEDALAEKANNNGHSTTKQAATLARDAKAKHFIATHIS 271 >gi|163941883|ref|YP_001646767.1| ribonuclease Z [Bacillus weihenstephanensis KBAB4] gi|229013352|ref|ZP_04170492.1| Ribonuclease Z [Bacillus mycoides DSM 2048] gi|229134951|ref|ZP_04263757.1| Ribonuclease Z [Bacillus cereus BDRD-ST196] gi|229168886|ref|ZP_04296604.1| Ribonuclease Z [Bacillus cereus AH621] gi|254808613|sp|A9VG79|RNZ_BACWK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|163864080|gb|ABY45139.1| ribonuclease Z [Bacillus weihenstephanensis KBAB4] gi|228614616|gb|EEK71723.1| Ribonuclease Z [Bacillus cereus AH621] gi|228648453|gb|EEL04482.1| Ribonuclease Z [Bacillus cereus BDRD-ST196] gi|228747945|gb|EEL97810.1| Ribonuclease Z [Bacillus mycoides DSM 2048] Length = 307 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 90/301 (29%), Gaps = 93/301 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA GVP R S++ + + ERG T + D G Sbjct: 1 MEFVFLGTGA--GVPSKG--------------RNVSAIALQLLEERG--QTWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA--------- 111 Q+L V I+ + TH H DHI G+ GL G Q + VY Sbjct: 43 QHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTKLTVYGPKGIKQFIEV 102 Query: 112 ----------------PDCMKHL-----------------FESFRYCFKALDDRTYPPIV 138 + + E F Y D + + Sbjct: 103 ALLVSTTHVKYPLEIVEITEEGIVFEDNEFCVETKRLSHGIECFGYRIVEKDIQGALLVD 162 Query: 139 NPIVIENNDVPICMKSAGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTD 186 + + P+ + G + + I Q+ I+ LG + YC Sbjct: 163 KLLGMGVKPGPVFKRLKDGEVVELENGTVLDGKDFIGPPQKGRVITILG----DTRYC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S E Q+ D L+ +A + H + ++ N K ILTH+ Sbjct: 217 -----EASRELAQDADVLVHEATFAAEDEQQAYDYFHSTSKQAASIALQANAKRLILTHI 271 Query: 241 H 241 Sbjct: 272 S 272 >gi|150008332|ref|YP_001303075.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides distasonis ATCC 8503] gi|255015488|ref|ZP_05287614.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_7] gi|256839380|ref|ZP_05544889.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides sp. D13] gi|262384549|ref|ZP_06077683.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_33B] gi|298375089|ref|ZP_06985046.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_19] gi|301309158|ref|ZP_07215102.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 20_3] gi|149936756|gb|ABR43453.1| putative metallo-beta-lactamase superfamily hydrolase [Parabacteroides distasonis ATCC 8503] gi|256738310|gb|EEU51635.1| metallo-beta-lactamase superfamily hydrolase [Parabacteroides sp. D13] gi|262293842|gb|EEY81776.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides sp. 2_1_33B] gi|298267589|gb|EFI09245.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 3_1_19] gi|300832840|gb|EFK63466.1| metallo-beta-lactamase superfamily protein [Bacteroides sp. 20_3] Length = 267 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 77/226 (34%), Gaps = 47/226 (20%) Query: 57 IVDTGPDFYM--QVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++D G +VL+++ I AVL TH HADHI +L +K I VYA Sbjct: 27 LIDAGIGIRTIKKVLKDRSIDFTKIVAVLITHDHADHI-----KTVGYLGEKLCIPVYAT 81 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 D + + D Y + + + + + H Sbjct: 82 ADVHRGI-----------DKSRY--VEETLCVSRKVIEKEVPFLIRDFRITAFEVPHDST 128 Query: 172 SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS----- 216 ++G+ + TDV + + + LI++A L+ G + + Sbjct: 129 DNVGYHIEYGNHKFTFATDVGHITDTVGKYICMANHLILEANYDEEMLRFGTYPAFLKER 188 Query: 217 ------HFSLSESLKKIE---LINPKNAILTHMHVDLDYDMVLKST 253 H S E+ + + KN L H+ D ++ + T Sbjct: 189 VASPTGHLSNREAAEFLATHYNTGLKNIWLCHLSRDNNHPELAYKT 234 >gi|251779760|ref|ZP_04822680.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084075|gb|EES49965.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 263 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTG-PDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G P + + + +D + TH H+DHI G+ L +K I Sbjct: 20 EKSKILIDAGLPGKRINEALKSINQSPNDLDGIFVTHEHSDHIKGVG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + I+ D + ++ Sbjct: 75 PIYANSNTWNAM-------------ESLIGKIKEHNIKVIDK--RSVTQIKDLDVKAFNI 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H IS +G+ N V+ TD+ F E + ++ + +++++ LK G + Sbjct: 120 PHDSISPMGYTIANKNKKVSVATDLGTFTKEIYDNIKESEIILLESNHDVSMLKYGPYPY 179 Query: 216 ----------SHFSLSESLKKIELIN----PKNAILTHMH-----VDLDYDMVLKSTPSR 256 H S + + I I K IL H+ DL Y V+ Sbjct: 180 SLKRRILSEIGHLSNDDCGEAIVQILKNGFNKKVILGHLSSTNNQPDLAYQTVVNVLREN 239 >gi|154151133|ref|YP_001404751.1| ribonuclease Z [Candidatus Methanoregula boonei 6A8] gi|153999685|gb|ABS56108.1| ribonuclease Z [Methanoregula boonei 6A8] Length = 312 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 35/177 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG +L P R S + I R ++ T++ D G Sbjct: 4 ETLQVYFLGTAGALPTPV----------------RNPSCIMIRRGTD-----TLLFDCGE 42 Query: 63 DFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF 119 Q++R + +IDA+ +H HADH GI GL F + P+ +Y Sbjct: 43 GAQQQMMRARCGFTIDAIFVSHWHADHFLGIFGLVQTMSFNGRTEPLTIYGPSWVHD--- 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F K + ++ + +E ++ G I A HG + +LG+ Sbjct: 100 --FVETVKKVSRFNLKFTLDSVELEEGS---WVRFEGYTITA--FAASHG-LPALGY 148 >gi|152984190|ref|YP_001349737.1| hypothetical protein PSPA7_4385 [Pseudomonas aeruginosa PA7] gi|150959348|gb|ABR81373.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 236 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 54/221 (24%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S+T +++D G ++ R + +DA+L TH HADHIHG++ L + Sbjct: 2 SSSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-----LLARHY 56 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VY + ++ + P++ ++ + A +E + Sbjct: 57 QIPVYLSAGTLRGMRR---------------PVLPAELLRAGQ-----RLAIRGLEVQVV 96 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H F + TD+ AE LE + +D L+++A L G + Sbjct: 97 GVSHDAREPTQFVLTDGQRRFGMLTDLGMATAEVLECYRAVDALVVEANHDSTMLAGGPY 156 Query: 215 S-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 H + +S + ++ ++ + +L H+ Sbjct: 157 PYFLKARVGGPRGHLNNHQSAELVKQLDWRRMQHLVLAHLS 197 >gi|262067834|ref|ZP_06027446.1| putative metal dependent hydrolase [Fusobacterium periodonticum ATCC 33693] gi|291378557|gb|EFE86075.1| putative metal dependent hydrolase [Fusobacterium periodonticum ATCC 33693] Length = 268 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 48/211 (22%) Query: 53 NTTVIVDTGPDFYMQ-VLREQVL------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +T +++D G F Q +++E + ID +L TH H DH + R Sbjct: 21 DTNILIDCG--FKTQKLMKETLDELLSKVKIDGILITHEHNDH---------FTPWTGRL 69 Query: 106 -----IDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 I +Y + +Y I IE N + + Sbjct: 70 SIEYGIPIYLHKKHYETEETRKTKYLSYENKKEGKIYCAQTIDIEENS-----EFYIKDL 124 Query: 160 EAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIID-------ALK 210 + H +LGF F + + + TD +K++ + L ++ + Sbjct: 125 KIETFTSYHDARKTLGFVFNDNQLCWVTDCGFLSTYIKDKIKQCNNLALEFNYDIKKLID 184 Query: 211 NGLHSS----------HFSLSESLKKIELIN 231 + H H ++ E+LK ++ I Sbjct: 185 SDRHWKNKLRTLGKFGHLNIDEALKFLKNIK 215 >gi|212640091|ref|YP_002316611.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] gi|212561571|gb|ACJ34626.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 244 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 39/233 (16%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG 91 KN T L +VD G Q+ + IDAV+ +H H DH+ Sbjct: 14 KKNEATSCYLF------EHDGFRFLVDCGSGALAQLQNVIDIEQIDAVIVSHYHHDHVAD 67 Query: 92 IDGLRGYFLKQKR------PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 I L+ L +K + +Y +LD + + + V + Sbjct: 68 IGPLQYARLIKKNLGVDLPELPIYG----------------HSLDRDGFARLAHKGVTKA 111 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNL 201 G + +H I R V Y D + P + + Sbjct: 112 VAYDPNETLYIGPFAISFMETEHPAI-CYAMRIEAGGKTVVYTADSSYLPQF-VPFAKQA 169 Query: 202 DFLIIDA-LKNGLHSS---HFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 LI + G H+ H + E+ + +LTH+ + + ++ Sbjct: 170 HLLICECNFYAGQHAKQAGHMTSEEAATIARDAGVETLLLTHLPHFGNVEQLV 222 >gi|317508769|ref|ZP_07966419.1| metallo-beta-lactamase superfamily protein [Segniliparus rugosus ATCC BAA-974] gi|316252932|gb|EFV12352.1| metallo-beta-lactamase superfamily protein [Segniliparus rugosus ATCC BAA-974] Length = 265 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 73/250 (29%), Gaps = 43/250 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S ++ ++VD G Sbjct: 1 MRLTVLGCTGS----VTGPDSPA------------SGYLVTAPDAPP----LVVDFGGGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKHLFE 120 + R + VL +H HADH I GL + +Y D L Sbjct: 41 LGALQRHANPNDVTVLLSHLHADHCLDIPGLLVWRRYGPDAVGERALLYGPADAALRLGV 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + DD + +E + G + P H +S G R + Sbjct: 101 ASAEVGGQCDDIS-------DTLEAHAWAEREPVKFGELSVTPFRVFHPP-TSYGLRIVD 152 Query: 181 -----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-----HFSLSESLKKIELI 230 +AY D E Q D + +A + H S +E+ + Sbjct: 153 SSGAVLAYSGDT-GVCQAVEELAQGADVFLCEASWTHDPDNRPVGVHLSGTEAGEIARRA 211 Query: 231 NPKNAILTHM 240 +LTH+ Sbjct: 212 GVGELLLTHI 221 >gi|269795790|ref|YP_003315245.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542] gi|269097975|gb|ACZ22411.1| metal-dependent hydrolase, beta-lactamase superfamily III [Sanguibacter keddieii DSM 10542] Length = 267 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 63/288 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG S P P +P SS + G +V++D G Sbjct: 1 MKLTILGMAGS--FP---------SPESPA-----SSYLVQATDADGRTWSVLMDLGSGA 44 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------------KRPIDVYA 110 + R +DAV +H H DH L G+++ + P VYA Sbjct: 45 LGALQRVASPFDVDAVAISHMHPDHFA---DLCGFYVYLKYHPVCGSERGTGRAPTPVYA 101 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L E++ + T ++ E + G E P+ H Sbjct: 102 PAAAEQRLAEAYG----LEAEETMRGQLDFRSWEPG-----TTTTVGPFEIEPVAVFH-P 151 Query: 171 ISSLGFRFGN-----------VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHS 215 + + G R +AY D +A ++ ++ D L+ +A ++ + Sbjct: 152 VPAYGVRVTGPSSVEPGRRVTLAYTGDTDAC-DGVVDLARSADLLLAEAAFVEGRDSVRG 210 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H + + + +LTH+ D + + V A+DG Sbjct: 211 VHLTGLRAGEVATQAGAARLLLTHVPSWNDPAVTVAEA----VSAYDG 254 >gi|319956849|ref|YP_004168112.1| ribonuclease z [Nitratifractor salsuginis DSM 16511] gi|319419253|gb|ADV46363.1| ribonuclease Z [Nitratifractor salsuginis DSM 16511] Length = 306 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R + G ++ D G Sbjct: 2 IELTFLGT--SAGVPT---------------RHRNVSGLALRPEQSGG--WLLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+++ + ++ + TH H DH++G+ GL L + P+++Y P + L Sbjct: 43 QHQIMKSTLSLFRLERIFITHLHGDHVYGLFGLLASRGMLMCETPLEIYGPPGLKEMLES 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + P ++ ++ + G P+ H I+ G+ F Sbjct: 103 VM----------RLSQLHLPFEVKTRELNGTERLEFGSYRIEPVPMSHS-ITCYGYAF 149 >gi|157413911|ref|YP_001484777.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9215] gi|166991496|sp|A8G6G0|RNZ_PROM2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157388486|gb|ABV51191.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. MIT 9215] Length = 312 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNVTFLGT--SSGVPSLT---------------RNVSSLALKLSQSSEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I++Y + ++ Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSKGIEIYGPSELRSYINS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + F L +YP ++ + +EN + I+ +H +I + G+R Sbjct: 102 ALKSSFCKL---SYP--LHFVEVENYASKNKILFENNKIKVNCACLKH-KIPAYGYRV 153 >gi|160888253|ref|ZP_02069256.1| hypothetical protein BACUNI_00662 [Bacteroides uniformis ATCC 8492] gi|156862199|gb|EDO55630.1| hypothetical protein BACUNI_00662 [Bacteroides uniformis ATCC 8492] Length = 291 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 61/234 (26%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHI---HGIDGLRGYFLKQKRP 105 +++D G +++ + I AV TH HADHI G+ Sbjct: 50 ILIDAGIAVRT--IKKGLKEAGISMEMIRAVFVTHDHADHIKAVGGLGEKLN-------- 99 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + + S+ K Y P+ +E+ Sbjct: 100 IPIYTTARIHEGINRSYCMTEKLYSSVRYLEKQQPMQLED-------------FHIESFE 146 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++G+ A+ TD+ + E ++ ++LI++A L+ G + Sbjct: 147 VPHDGTDNVGYCIEIGGKVFAFLTDLGEITPTAAEYIRKANYLILEANYDEEMLRMGTYP 206 Query: 216 -----------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S + + + E + L H+ D ++ + T Sbjct: 207 QYLKERITSRTGHMSNIATAEFLSENMTEHLQ--YIWLCHLSKDNNHPELAYKT 258 >gi|283768421|ref|ZP_06341333.1| metallo-beta-lactamase domain protein [Bulleidia extructa W1219] gi|283104813|gb|EFC06185.1| metallo-beta-lactamase domain protein [Bulleidia extructa W1219] Length = 266 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 76/223 (34%), Gaps = 63/223 (28%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD G + V +DAVL TH H DHI + + Y Sbjct: 19 EDGTTHILVDCGSSKKRILAGLHDFGVDERELDAVLITHNHGDHIAAVTAFKDY------ 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +Y+ + V+ +IE D ++ ++ +PI Sbjct: 73 --PIYSPVEL---------------------EGVDVFLIEA-DKAFTIE----TLQIMPI 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H ++G+ F N + Y TD + + L+ +D++II++ L N Sbjct: 105 GLSHDAGKTVGYVFDNGVERLLYMTDTGYLNEKYISYLRGMDYVIIESNHDVEMLMNTNR 164 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H + + +E I N K L H+ + Sbjct: 165 PLYLKRRILDDEGHLNNEDCAAILEKIVTENTKYIWLAHLSQE 207 >gi|329578024|gb|EGG59439.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1467] Length = 283 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 62 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 119 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 120 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 163 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 164 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 221 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 222 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 261 >gi|304397924|ref|ZP_07379800.1| ribonuclease Z [Pantoea sp. aB] gi|304354635|gb|EFM19006.1| ribonuclease Z [Pantoea sp. aB] Length = 303 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 95/290 (32%), Gaps = 73/290 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H T LG G G P + +R +S+ +R S T + D G Sbjct: 1 MHLTFLGTG--GGAPSL--------------QRNVTSIAFTRAL---SGETWLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------DC 114 +Q +R + +D + TH H DHI G+ GL P+ VY + Sbjct: 42 QLQFMRSSLKPGKLDKIFITHLHGDHIFGLPGLLTSRSMAGLTSPMTVYGPKGLKTFVET 101 Query: 115 MKHLFESF-RYCFKALDDR-----------------TYPPIVNPIVIENNDVPICMKSAG 156 + S+ Y ++ ++P IE +D P + +A Sbjct: 102 ALSISGSYTDYPLSLVEIEAGWTLDDGEFRISAWPLSHPVACFGYRIEQHDKPGLLDAAR 161 Query: 157 GVIEAIP-------------ILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEK 197 E +P + + GR+ + G +A D +L+ Sbjct: 162 LKAEGVPRGPWFQQLKQGECVTLEDGRVINGADYLGPATPGKKLAIFGDTAP-TDVALQL 220 Query: 198 LQNLDFLI----IDA--LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++D ++ ++A ++ H + ++ + K I TH Sbjct: 221 AADVDLMVHETTLEAAMMEKANGRGHSTTLQAADVAKRAGAKRLIATHFS 270 >gi|92114931|ref|YP_574859.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] gi|91798021|gb|ABE60160.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM 3043] Length = 263 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 53/221 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T V+VD G R +DA+L TH H DHI G+ L ++ Sbjct: 28 SDGETHVLVDCGFGLRETERRLAQFGLHPRQLDAILLTHEHGDHIRGVGPLA-----RRY 82 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY + + VP + A ++ P+ Sbjct: 83 AMPVYLTAGT------------------WLSGRLGEVPRHEWVVPQS-RFAIKGLDIDPV 123 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H + FRF ++ TD+ +E Q D LI++ Sbjct: 124 TVPHDAREPVQFRFRAHDRHLGVLTDLGHPSEHVVEAFQGCDALILECNHDRRMLDVGPY 183 Query: 209 -----LKNGLHSSHFSLSESLKKIELIN---PKNAILTHMH 241 + G H H + ++ + + + + + +H+ Sbjct: 184 PPRLKRRVGGHWGHLANVQAAELLARLGLDRLQRIVCSHIS 224 >gi|325856913|ref|ZP_08172411.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] gi|325483286|gb|EGC86263.1| metallo-beta-lactamase domain protein [Prevotella denticola CRIS 18C-A] Length = 266 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + VL TH HADH+ + + G + Sbjct: 21 GTDCLMIDCGVGIRSLKKHFHNYGLQLSMVHNVLITHDHADHVKSVGSISG-----DLHL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + + + +C + D + +++ ++ G P Sbjct: 76 PVYTTEDVHRGISRN--WCVRRKIDS----QLAKNLVKGKEI------MIGAFRVTPFGV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ TD + + ++L+I+A L+ G + Sbjct: 124 PHDSTDCVGYSIECGGIRFTLVTDCGHITEDIAHYISISNYLVIEANHEPEKLEAGPYPR 183 Query: 217 HF---------SLSE---SLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H LS + +E +P ++ L H+ + ++ + K T Sbjct: 184 HLKKRISGPDGHLSNEACAKALVENASPALRHVWLCHLSDENNHPELAKKT 234 >gi|269128063|ref|YP_003301433.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268313021|gb|ACY99395.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 249 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 76/236 (32%), Gaps = 35/236 (14%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVLSI 76 V I P +P SS + ++++D G + R VL I Sbjct: 3 VTVIGCSGSFPGPKSPA-----SSYLVEA-----DGFSMLLDLGNGALGSLQRFHDVLDI 52 Query: 77 DAVLYTHPHADHIHGIDG---LRGYFLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDR 132 DA+ +TH H DH + R Y K P I VY +H+ + Y + D Sbjct: 53 DAICFTHLHPDHCLDLTVYWIARVYCPFGKAPVIPVYGPAGTAEHMAK--AYELEPNPDM 110 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 + E ++ G H + + G R + +AY D Sbjct: 111 GEAFTFHEFPAEPFEL--------GPFRVTAARVNH-PVEAYGLRVEHEGKVLAYSGDTG 161 Query: 189 AFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 ++ + D + +A + H + E+ + +LTH+ Sbjct: 162 GC-QALIDIARGADLFLCEAAFVESRPNPPDMHLTGREAAEHAARAGVGRLVLTHL 216 >gi|148240312|ref|YP_001225699.1| ribonuclease Z [Synechococcus sp. WH 7803] gi|166991513|sp|A5GN87|RNZ_SYNPW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|147848851|emb|CAK24402.1| Ribonuclease Z [Synechococcus sp. WH 7803] Length = 323 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 71/215 (33%), Gaps = 37/215 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V TH H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLSGSSAGVDLYGPDPLDAYLHG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 R + YP V+P+ I + + A P+ H R+ + +R Sbjct: 102 VLR---TSSTRIGYPLAVHPVRGAAESGRIVFEDDDLQVRATPL---HHRVPAYAYRVDQ 155 Query: 180 -------NVAYCTDVNAFPAESLEKLQNLDFLIID 207 +VA D+N P L+ + + +D Sbjct: 156 KPRAGRFDVAKARDLNIPPGPVYAALKRGETVTLD 190 >gi|319893717|ref|YP_004150592.1| Zn-dependent hydrolase, beta-lactamase superfamily [Staphylococcus pseudintermedius HKU10-03] gi|317163413|gb|ADV06956.1| Zn-dependent hydrolase, beta-lactamase superfamily [Staphylococcus pseudintermedius HKU10-03] Length = 260 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 49/242 (20%) Query: 50 RGSNTTVIVDTGPD-FYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G M+ L ++ + +L TH H+DHI G+ L +K Sbjct: 16 ESDKGSLLVDVGLTGKKMEALFDQIDRKISDLSGILVTHEHSDHIKGLG-----VLARKY 70 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + + P+ V ++ AG IE+ Sbjct: 71 GLPVYANEKTWTCI----------DKKDSKIPLDQKFVFNPHE---TKSIAGFDIES--F 115 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H I + F TD ++ D + +D L+ + Sbjct: 116 NVSHDAIDPQFYIFHNNYKKFTMITDTGYVSERMKGMIRGSDAFMFESNHDVDMLRMCRY 175 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 H S ++ ++ + K L+H+ D + + + + S+++ A Sbjct: 176 PWKTKQRILSDMGHVSNEDAAHAMKDVITGQTKRIYLSHLSQDNNMKDLARMSVSQILQA 235 Query: 261 FD 262 D Sbjct: 236 HD 237 >gi|297539029|ref|YP_003674798.1| beta-lactamase-like protein [Methylotenera sp. 301] gi|297258376|gb|ADI30221.1| beta-lactamase-like protein [Methylotenera sp. 301] Length = 341 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 84/262 (32%), Gaps = 49/262 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 +LG G +++R SS I + V++D+G Sbjct: 67 IELQVLGSGG----------------PEMQDKRASSSYLIWQDG----MARVLIDSGGGS 106 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAA------PDC 114 + + VL+TH H DH L YF + +P+ VY P Sbjct: 107 ALRFGESGANMTDLYVVLFTHLHVDHTADFPALIKSSYFEDRSKPLPVYGPTGNTLFPST 166 Query: 115 MKHLFESFR------YC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + + + F Y F +Y ++ +E + I + A Sbjct: 167 TEFIQDLFGTKGAYRYLNDFLTTSQSSY--VIQAHNVEFKNQRIKEVFNQSGVIATATDV 224 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLII-DALKNGLH----SSH 217 HG + +L +R ++ + D N ++ D L+ +A+ G H Sbjct: 225 VHGSVPALAWRVDIGGKSIVFSGDTNGGNGNLQLLAKDADILVAHNAVPEGASGVERKLH 284 Query: 218 FSLSESLKKIELINPKNAILTH 239 S + N K +L+H Sbjct: 285 MPPSVIGQIAVEANIKQLVLSH 306 >gi|294778609|ref|ZP_06744031.1| metallo-beta-lactamase family protein [Bacteroides vulgatus PC510] gi|294447558|gb|EFG16136.1| metallo-beta-lactamase family protein [Bacteroides vulgatus PC510] Length = 267 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 78/227 (34%), Gaps = 47/227 (20%) Query: 56 VIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G ++ L + I AV TH HADHI + L +K I VY+ Sbjct: 26 ILVDAGIGIRTIKKTLKELGIGLDIIRAVFITHDHADHIKAVGHL-----GEKFGIPVYS 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P+ + + YC + +E D I H Sbjct: 81 TPEVHAGINK--SYCMTEKLSTCVHYLHKGETMELEDFAI-----------TAFEVPHDG 127 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++G+ ++ TD+ + E + ++L+++A LK G + Sbjct: 128 TDNVGYCMNIDGKIFSFLTDLGHITPTAAEYICKANYLVLEANYDEEMLKMGPYPQYLKE 187 Query: 216 ------SHFSLSESLKK-IELINP--KNAILTHMHVDLDYDMVLKST 253 H S E+ E IN K L H+ D ++ + T Sbjct: 188 RIAGPNGHMSNRETADFLAENINESLKYIWLCHLSKDNNHPELAYKT 234 >gi|270296775|ref|ZP_06202974.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272762|gb|EFA18625.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 291 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 61/234 (26%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHI---HGIDGLRGYFLKQKRP 105 +++D G +++ + I AV TH HADHI G+ Sbjct: 50 ILIDAGIAVRT--IKKGLKEAGISMEMIRAVFVTHDHADHIKAVGGLGEKLN-------- 99 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + + S+ K Y P+ +E+ Sbjct: 100 IPIYTTARIHEGINRSYCMTEKLYSSVRYLEKQQPMQLED-------------FHIESFE 146 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++G+ A+ TD+ + E ++ ++LI++A L+ G + Sbjct: 147 VPHDGTDNVGYCIEIDGKVFAFLTDLGEITPTAAEYIRKANYLILEANYDEEMLRMGTYP 206 Query: 216 -----------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S + + + E + L H+ D ++ + T Sbjct: 207 QYLKERITSRTGHMSNIATAEFLSENMTEHLQ--YIWLCHLSKDNNHPELAYKT 258 >gi|322705874|gb|EFY97457.1| tRNA processing endoribonuclease Trz1, putative [Metarhizium anisopliae ARSEF 23] Length = 844 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 92/298 (30%), Gaps = 60/298 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S VP + S + RV G ++D G Sbjct: 550 EIIPLGTGSS--VPS---------------KHRNVSATLIRVPGIG---NYLLDCGEGTL 589 Query: 66 MQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVY 109 Q+ R + ++ ++ +H HADH G L + +Q I Sbjct: 590 GQIRRAFDAEETADVLRNLKCIVISHVHADHHMGTASLIKAWYEQSIRDGTSTTLAISCI 649 Query: 110 AAPDCM-KHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQ- 166 M + L + F L + P P + + I+ IP+ Sbjct: 650 GRYRSMLEELSQVEDLGFHRLRFPSCPFPNGKDRDMTTAEDLGEENFGLASIKRIPVPHC 709 Query: 167 --QHGRISSL--GFRFGNVAYCTDVNAFPAESLEK-LQNLDFLIIDAL---KNGLH---S 215 +G L G R AY D P+ + + + L+ + H Sbjct: 710 WRSYGTQLELTSGLRI---AYSGDCR--PSSAFAQGCKGAHLLVHECTFGDDKQDHAKAK 764 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-----VVPAFDGMQFSS 268 H +++E+L + + +LTH LK V+ AFD M+ Sbjct: 765 KHSTMAEALSVAREMEARRTLLTHFSQRYSKADSLKRDRVHGEEHSVLLAFDLMRVKL 822 >gi|188589469|ref|YP_001922679.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499750|gb|ACD52886.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 263 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTG-PDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G P ++ + + +D + TH H+DHI G+ L +K I Sbjct: 20 EKSKILIDAGLPGKRIDEALKSINQSPNDLDGIFVTHEHSDHIKGVG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + I+ D + ++ Sbjct: 75 PIYANSNTWNAM-------------ESLIGKIKEHNIKVIDK--RSVTQIKDLDVKAFNI 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H IS +G+ N V+ TD+ F E + ++ + +++++ LK G + Sbjct: 120 PHDSISPMGYTIANKNKKVSVATDLGTFTKEIYDNIKESEIILLESNHDVSMLKYGPYPY 179 Query: 216 ----------SHFSLSESLKKIELIN----PKNAILTHMH-----VDLDYDMVLKSTPSR 256 H S + + I I K IL H+ DL Y V+ Sbjct: 180 SLKRRILSEIGHLSNDDCGEAIVQILKNGFNKKVILGHLSSTNNQPDLAYQTVVNVLREN 239 >gi|15672701|ref|NP_266875.1| hypothetical protein L125485 [Lactococcus lactis subsp. lactis Il1403] gi|12723631|gb|AAK04817.1|AE006305_9 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] gi|326406263|gb|ADZ63334.1| beta-lactamase superfamily metal-dependent hydrolase [Lactococcus lactis subsp. lactis CV56] Length = 250 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 36/226 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL--- 100 S + + S +++D G ++ E Q +DAV+ +H H DHI + LR Y Sbjct: 21 SYLLQSESGFNMLLDCGSRAVTELEHELQPTQLDAVILSHYHEDHIADLGALRQYRQLYP 80 Query: 101 -----KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +Y + Y F L E + + + Sbjct: 81 LGQDGWDGMMLPIYGHGE--------NEYEFSKLTLDKVS--------EGHLYNVENGTK 124 Query: 156 GGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H ++ R + Y D F + + + D L+ D Sbjct: 125 VGPFDITFLKTVHPVVN-YAMRIVERRTGQVLIYTGDTGYFDELT-DFAKEADLLLADVY 182 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +H S E+ + + K ILTH+ D D++L Sbjct: 183 FFKDKAKMPNHLSSIEAGQIAKDAKVKKLILTHLPQFGDLDILLTE 228 >gi|330835745|ref|YP_004410473.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567884|gb|AEB95989.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 224 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 52/275 (18%), Positives = 97/275 (35%), Gaps = 64/275 (23%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG GA I R +S + I G +++D G +M Sbjct: 1 MTFLGTGAGS---TIGSS------------RFKSGILIE-----GKEAKIVLDFGSGVHM 40 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHLFE 120 ++ V DA+ TH H DH GI +R ID +Y +P + + Sbjct: 41 RLEDLNV-YPDAIFITHLHVDHFSGIFD-----HLVRRKIDSSPVVSIY-SPHGLADIIN 93 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRISSLGFRF- 178 S++ I+ + A G +E + H +I ++ + Sbjct: 94 SYK---------------RTNEIDAKVKEDKLPGASVGDLEIYSVESCH-KIYAVSYVIT 137 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLI--IDALKNGLHSSHFSLSESLKKIELINPK 233 + Y D + +++L +D +I + + H S+ E++K Sbjct: 138 DGNKRILYSGDTAEPCDQIMKELNGIDMIIHEASCIDDCKIWGHTSVKEAVKLFRSP--- 194 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +LTH+ +++++ S + A DGM + Sbjct: 195 --VLTHIPSQIEHEIQRL---SNGLIAKDGMTINV 224 >gi|187927394|ref|YP_001897881.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ralstonia pickettii 12J] gi|309779906|ref|ZP_07674660.1| coenzyme PQQ biosynthesis protein B [Ralstonia sp. 5_7_47FAA] gi|187724284|gb|ACD25449.1| coenzyme PQQ biosynthesis protein B [Ralstonia pickettii 12J] gi|308921265|gb|EFP66908.1| coenzyme PQQ biosynthesis protein B [Ralstonia sp. 5_7_47FAA] Length = 311 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 98/319 (30%), Gaps = 66/319 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + C RT+SS+ +S ++++ Sbjct: 4 MRIIVLGASAGGGFPQWNCNCRNCAGYRAGTVRALARTQSSIAVSTNGLDW----LLINA 59 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I AVL DH+ G+ L++ + V+ Sbjct: 60 SPDILTQIRATPALQPGRATRDTGIAAVLLMDAQVDHVTGL-----MMLREGGRLRVHCT 114 Query: 112 PDCMKHLFESFR-------YCFKAL-------DDRTYPPIVNPIVIENNDVPICMKSAGG 157 + L E YC + P + P + S Sbjct: 115 ASVWEDLTERLPLTRVLAHYCGTDWQPITLDTEAGLQRPFEVAGIHHLRITPFPLSSKAP 174 Query: 158 VIEAIPILQQHGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA--- 208 + G ++G + Y + + D +++D Sbjct: 175 PYSPRRLEPDPG--DNIGILLEDTHTGRKTFYAPGLGVIEPHIATAMAGADCVLVDGTFW 232 Query: 209 -----LKNGLHSS------HFSLS-ES--LKKIELINPKNAILTHMHV-----DLDYDMV 249 +++GL S H LS ++ L + ++ + I+ H++ D D Sbjct: 233 TEDEMVRSGLSSKLAHEMGHLPLSGDAGMLAFLNTLDARRKIVIHINNSNPILDDDSAER 292 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + T V A+DGM+ Sbjct: 293 AELTRYGVEVAYDGMEIEL 311 >gi|298368726|ref|ZP_06980044.1| ribonuclease Z [Neisseria sp. oral taxon 014 str. F0314] gi|298282729|gb|EFI24216.1| ribonuclease Z [Neisseria sp. oral taxon 014 str. F0314] Length = 307 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 85/326 (26%), Gaps = 101/326 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT---VIVDTG 61 LG G A P+ +N ++ + + + D G Sbjct: 1 MELQFLGTG-------------AGSPSKARN--------VTCTALKTGGKNNEVWLFDCG 39 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMK 116 Q+LR + I + TH H DHI G+ GL R + P+ +Y + Sbjct: 40 EATQHQILRTNIRPGKIRRIFITHLHGDHIFGLPGLLSSRSFLGGADGPLSLYGPAGIRR 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + + +YP + V + + G H + S + Sbjct: 100 FVESALE---VSQTQLSYPINFHEFVSDGLILD------DGEFTVSAFGLAHS-LPSFAY 149 Query: 177 RF------------------------------GNVAYCTDVNAFPAES------------ 194 R G D + Sbjct: 150 RIEEKERAGGLQIDRLRELGIPSGPLLGRLKNGETVTLDDGRLIDGKEYLSPPRKGRIIA 209 Query: 195 -----------LEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAIL 237 L + D L+ +A + H ++S++ K L Sbjct: 210 VFGDTKPCRSALAAAEGADVLVHEATFAAGDEAMAEKVFHSTVSDAANLAAEAGVKQLYL 269 Query: 238 THMH---VDLDYDMVLKSTPSRVVPA 260 TH+ D + +L+ + PA Sbjct: 270 THISARYADEEQRQMLERQAQNIFPA 295 >gi|254459840|ref|ZP_05073256.1| arylsulfatase, putative [Rhodobacterales bacterium HTCC2083] gi|206676429|gb|EDZ40916.1| arylsulfatase, putative [Rhodobacteraceae bacterium HTCC2083] Length = 298 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 91/288 (31%), Gaps = 73/288 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D T+ G + G P PK R S I+R +++D Sbjct: 2 MFDTKFITL---GTAGG-PV------------PKLHRAAPSHAITR-----GERVILIDC 40 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G Q++R + + ++ TH H DHI + G + +R PI +Y P + Sbjct: 41 GEGAMQQLMRAGIDFRRVHKIILTHHHFDHIGSLFTCLGINMMLQRKEPITIYGPPGTRQ 100 Query: 117 HL------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + +++P + + +E ++ I+ H R Sbjct: 101 IVEGLAMACDVPNQIGFGVKGQSFPHPRDFVQVE--EITSDSTFRIDDIDITCCENTHYR 158 Query: 171 IS---------SLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI----------- 205 SL RF ++ + D P ++E+L + L+ Sbjct: 159 PENELGTEGPVSLSLRFDAPDRSIVFTGDTG--PCRAVEQLAKGAQLLVGEMMLAEQVIA 216 Query: 206 -------------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 I + LH H S +E + + H+ Sbjct: 217 QLQSKNPHMTPERIAMMGKHLHHHHLSPAELGELAARAGVAQVVAVHI 264 >gi|51246458|ref|YP_066342.1| hypothetical protein DP2606 [Desulfotalea psychrophila LSv54] gi|50877495|emb|CAG37335.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 256 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 77/230 (33%), Gaps = 56/230 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I T +++D G + + V+ + A+ TH H DH+ G+ Sbjct: 14 SVYIE-----SGKTAILIDAGFSGKEIERRLAVIGRSTDCLRAICVTHEHRDHVGGVG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + V+A + + I N E D+ Sbjct: 67 ---VLARRCKMSVWANEGTL------------LGSEGIIKKIDNIREFETGDI-----LQ 106 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G +E H +G+ N + YCTD ++L D LI++A Sbjct: 107 IGDLELRSFSVMHDSADPVGYIISNGEKTLGYCTDTGYATHLMAKRLSACDGLILEANHD 166 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKN---AILTHMH 241 L+ G + H + ES + ++ + + +L H+ Sbjct: 167 PDLLRMGPYPLQLQQRVRSRQGHLANEESAQFLQDLCHEKLQCTVLAHLS 216 >gi|330995657|ref|ZP_08319555.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] gi|329574716|gb|EGG56277.1| metallo-beta-lactamase domain protein [Paraprevotella xylaniphila YIT 11841] Length = 281 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 81/281 (28%), Gaps = 74/281 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F LG G+S S S N +++D G Sbjct: 11 TDMLKFICLGSGSSG----------------------NSYFLFS------ENYGILIDAG 42 Query: 62 PDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + I AVL TH HADH+ + L + I VYA Sbjct: 43 IGIRTLKKHFNTCGLSLKQIKAVLITHDHADHVKAVGSLANEYG-----IPVYATELVHG 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + YC P + I ++ P H ++G+ Sbjct: 98 GIKRN--YCVH--------PKLKEENIRFLQKGQTLEL--DHFVITPFDVPHDSADNVGY 145 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS---------- 216 N TD + + ++L+++A L G + + Sbjct: 146 SVQYGDVNFCLITDAGHVTEQFGGYIAQANYLVLEANHDEDMLMMGPYPAYLKGRISGDY 205 Query: 217 -HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + ++ L H+ + ++ + + T Sbjct: 206 GHLSNKVAAQLLAEHVTDRLRHVWLCHISEENNHPELARKT 246 >gi|281491216|ref|YP_003353196.1| beta-lactamase superfamily metal-dependent hydrolase [Lactococcus lactis subsp. lactis KF147] gi|281374957|gb|ADA64475.1| Metal-dependent hydrolase, beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] Length = 250 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 36/226 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL--- 100 S + + S +++D G ++ E Q +DAV+ +H H DHI + LR Y Sbjct: 21 SYLLQSESGFNMLLDCGSRAVTELEHELQPTQLDAVILSHYHEDHIADLGALRQYRQLYP 80 Query: 101 -----KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + +Y + Y F L E + + + Sbjct: 81 LGQDGWDGMMLPIYGHGE--------NEYEFSKLTLDKVS--------EGHLYDVENGTK 124 Query: 156 GGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H ++ R + Y D F + + + D L+ D Sbjct: 125 VGPFDITFLKTVHPVVN-YAMRIVERRTGQVLIYTGDTGYFDELT-DFAKEADLLLADVY 182 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +H S E+ + + K ILTH+ D D++L Sbjct: 183 FFKDKAKMPNHLSSIEAGQIAKDAKVKKLILTHLPQFGDLDILLTE 228 >gi|253995981|ref|YP_003048045.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253982660|gb|ACT47518.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 260 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 94/268 (35%), Gaps = 53/268 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LGC S G I GD RT +SL + +++D G Sbjct: 3 QLKVLGC--SGG---IGGD-----------YRT-TSLLLDHD--------ILIDAGSGVG 37 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRY 124 + E +L I + TH H DHI I L + + PI +YA + + L + Sbjct: 38 DLSMDE-LLKISHIFVTHSHLDHIAFIPLLLDTVMGIRSEPITLYATQETLAILQ---AH 93 Query: 125 CF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 F K D P + ++ + G + H + ++G+ Sbjct: 94 IFNWKIWPDFNAIPNATAPFLRYQEIKLGQPVVLGGRTITALPVHH-VVPAVGYHIKGAA 152 Query: 180 -NVAYCTDVNAFPAESLEKLQN---LDFLIIDA------LKNGLHSSHFSLSESLKKIEL 229 ++ Y D + N L +LI++ L+ + S H S L+++ Sbjct: 153 HSLVYTGDT-TICDALWHAVNNINHLKYLIVETAFSNSELELAVLSKHLCPSMLLQELAK 211 Query: 230 INPKN------AILTHMHVDLDYDMVLK 251 +N + +TH+ D ++ + Sbjct: 212 LNAAHLTGALEVYITHLKPGEDAHIMRE 239 >gi|167035172|ref|YP_001670403.1| beta-lactamase domain-containing protein [Pseudomonas putida GB-1] gi|166861660|gb|ABZ00068.1| beta-lactamase domain protein [Pseudomonas putida GB-1] Length = 252 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSAAQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + I G +E Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGESLRI-------------GSLEVTAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVVSDGQRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDLLARGHYPA 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + + N ++ +L H+ Sbjct: 175 FLKQRVGGMQGHLNNHQAARLVHELGWSNLQHLVLAHLS 213 >gi|312134552|ref|YP_004001890.1| beta-lactamase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311774603|gb|ADQ04090.1| beta-lactamase domain protein [Caldicellulosiruptor owensensis OL] Length = 267 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 85/241 (35%), Gaps = 59/241 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHI--HGID 93 S+ IS +TT+IVD G F Q L E++ IDA+L +H H+DH+ GI Sbjct: 20 SILISY-----KDTTIIVDAGVSFKKLAQAL-EKIGFNKKIDAILLSHDHSDHVKCAGI- 72 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 +K + + + + S D +Y +++ Sbjct: 73 ------YFRKMNVPIITNYRTWEAIKNSLG-----KVDESYVKLIDT----------GAS 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 + G I H +GF F ++ CTDV K+ D +++++ Sbjct: 112 FSIGSIGIDTFSIPHDASDPMGFCFYAKDRKISICTDVGHVSDSVASKIDFSDIILLESN 171 Query: 209 -----LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMV 249 L G + H S ++ I +N K L H+ + ++ V Sbjct: 172 HDIEMLLFGPYPYYLKQRIKGDKGHLSNEQAAYMILKLNLNRTKRIYLGHLSEENNHPDV 231 Query: 250 L 250 Sbjct: 232 A 232 >gi|124810191|ref|XP_001348794.1| metal-dependent hydrolase, putative [Plasmodium falciparum 3D7] gi|23497694|gb|AAN37233.1| metal-dependent hydrolase, putative [Plasmodium falciparum 3D7] Length = 858 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 90/268 (33%), Gaps = 60/268 (22%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M Y F LG G S+ P R S + +S N ++I+D Sbjct: 568 MLSYPCFYFLGTGCSM----------------PSTFRNVSGIILSIQ----KNFSIILDF 607 Query: 61 GPDFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI----- 106 G Q+ + S + +H HADH G+ Y L ++ + Sbjct: 608 GEGSLYQLYWMSTSWINFCSIIKSFRIIFISHAHADHHVGLY----YLLYMRKYLFPSLD 663 Query: 107 -DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + P +K F F + + EN ++ + ++ Sbjct: 664 DPLILIPITLKKWINLFNELFFDKKLKFV------YLTENLEINQQIDDENDILNIHVFK 717 Query: 166 QQHGRISSLGF-----RFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA------LKNGL 213 H S G + G++ Y D P E+++K +N D LI +A L + Sbjct: 718 VNH-INESYGIKVENKKIGSIVYSADTR--PCENVKKFSKNCDILIHEATFDDELLGEAI 774 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMH 241 + H + E++ + K ILTH Sbjct: 775 NKKHSTTKEAMDISLEVQCKTLILTHFS 802 >gi|332026880|gb|EGI66981.1| Ribonuclease Z, mitochondrial [Acromyrmex echinatior] Length = 810 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 106/290 (36%), Gaps = 52/290 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G+S+ P R S + + + ++++D G + Sbjct: 506 KIVMLGTGSSI----------------PSKVRNTSGILLQV----DKDHSMLLDCGEGTF 545 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-APDCMK 116 Q+++ + +I V +H HADH G+ GL K +Y AP + Sbjct: 546 GQIVKIYGKSGAHNILKTIKGVYISHMHADHHIGLIGLLKERRKVTED-PLYLLAPGHIN 604 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC----MKSAGGVIEAIPILQQHGR-- 170 + F+ + R N +++++ + M + V + +H Sbjct: 605 VWLHMYHTHFEPILHRMTLIKNNEFCMDSHNPELYKYRNMYNTLNVQAVRTVYVEHCPYS 664 Query: 171 --ISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDA------LKNGLHSSHFSLS 221 +S + Y D P A +E QN D LI +A +++ H ++S Sbjct: 665 YGVSVTLHNGKKIVYSGDT--MPCARLVELGQNCDLLIHEATMEDDLIEDAKLKFHSTVS 722 Query: 222 ESLKKIELINPKNAILTHMHVD---LDYDMVLKSTP--SRVVPAFDGMQF 266 ++++ E + K +LTH + + K+ P V A+D M Sbjct: 723 QAIQAGEKMKSKFTLLTHFSQRYSVIPHLPDNKNGPKLDNVGIAYDNMHI 772 >gi|303241657|ref|ZP_07328155.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] gi|302590772|gb|EFL60522.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] Length = 263 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 78/242 (32%), Gaps = 56/242 (23%) Query: 50 RGSNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD+G + + E I AVL +H H+DHI G L +K Sbjct: 19 SDGKTKILVDSGLSGKRIIEALVTIGENPSEISAVLVSHEHSDHIRG-----AGILSRKF 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND-VPICMKSAGGVIEAIP 163 I +YA + + + + P+ I+N C + G I Sbjct: 74 DIPIYANENTWNAMEQE----------------IGPVNIKNKVCFDNCEEFEIGNIFVKA 117 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H +GF F + TD+ + L L D L+I++ LK G Sbjct: 118 FPIPHDASDPVGFNFFLNNKKITTATDIGHMTNKLLSYLMGSDLLLIESNHDVEMLKVGP 177 Query: 214 HS-----------SHFSLSES---LKKIELINPKNAILTHMH-----VDLDYDMVLKSTP 254 + H S + + + K +L H+ +L Y V Sbjct: 178 YPWPLKKRILGDSGHLSNEMAGKVVAYLAKNGTKKFLLGHLSRENNFPELAYQTVCNVLG 237 Query: 255 SR 256 Sbjct: 238 EN 239 >gi|296390630|ref|ZP_06880105.1| hypothetical protein PaerPAb_20851 [Pseudomonas aeruginosa PAb1] Length = 252 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + +E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHHVELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGVATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + ++ ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLS 213 >gi|221640254|ref|YP_002526516.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodobacter sphaeroides KD131] gi|221161035|gb|ACM02015.1| Coenzyme PQQ biosynthesis protein B [Rhodobacter sphaeroides KD131] Length = 300 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 27/172 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G+P+ + C P R + +L S E +V+ P Sbjct: 2 LRIIVLGSAAGGGLPQWNCNCAGCRTARAEPALRNGQCALAASADGESW----FLVNASP 57 Query: 63 DFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+L R + I V+ T+ D + G+ L++ P ++A PD Sbjct: 58 DLRQQILDTPALHPRHGLRHSPIAGVILTNAEVDAVAGL-----LTLREGWPFAIHAHPD 112 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++ L + P + P + P A G + + Sbjct: 113 VLEVLAAN-------PIFGVLRPEIVPRRPMRPETPFEPVLADGRASGLTVR 157 >gi|223936794|ref|ZP_03628704.1| beta-lactamase domain protein [bacterium Ellin514] gi|223894645|gb|EEF61096.1| beta-lactamase domain protein [bacterium Ellin514] Length = 305 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 83/267 (31%), Gaps = 83/267 (31%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 TILG G+S +S + + +++D G Sbjct: 26 QLTILGSGSSG-----------------------NSAYLET-----EDARILIDAGFSVR 57 Query: 66 MQVLREQVLSI-------DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +R+++ +I +L TH H DHI+G+ L K I VY + Sbjct: 58 Q--IRQRLATIGRAPEGLSGILITHEHTDHINGL-----LGLATKLNIPVYCNRLTKDAI 110 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 Y F+ ++ G + H +GF Sbjct: 111 E----YQFQTK-------------LDCRIFGTGSSFELGDVIIETFSIPHDASDPVGFFM 153 Query: 177 --RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SH 217 G + + TD+ LE+++ + L++++ L+ H Sbjct: 154 RTTAGQIGFLTDLGHATKLVLERVRASNVLVLESNHDLKLLQESSRPWSLKQRIAGRHGH 213 Query: 218 FSLSESLKKIELINP---KNAILTHMH 241 S +E+ E+I ++ L H+ Sbjct: 214 LSNTEAADAAEVIMSADLRHLYLGHLS 240 >gi|84489223|ref|YP_447455.1| putative ribonuclease Z [Methanosphaera stadtmanae DSM 3091] gi|84372542|gb|ABC56812.1| putative ribonuclease Z [Methanosphaera stadtmanae DSM 3091] Length = 281 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 83/239 (34%), Gaps = 55/239 (23%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA 111 ++ D G Q++ + ID + TH H DHI G+ G+ F + RP+ +Y Sbjct: 2 ILFDCGEATQKQIMEAGISPMKIDDIYITHLHGDHILGLPGIVQSLAFRGRTRPLHIYGP 61 Query: 112 P---DCMKHLFESFRYC---------------------FKALDDRTYPPIVN-PIVIENN 146 + + H+ Y F+ L + +V+ IE Sbjct: 62 RGINELIDHIRHMGFYTIGYELITHEIEDDGILYQQNDFRILSRKMKHTVVDYAYKIEQL 121 Query: 147 DVPICMKSAGGVIEAIPIL----QQHGR-ISSLGFRFG------------NVAYCTDVNA 189 P ++ + P Q G+ ++ G V + D Sbjct: 122 RQPKFLRQKAIELGIPPGPLFGKLQAGKEVTVDGKIIKPEQVLGPPREGVKVVFSGDT-- 179 Query: 190 FPAESL-EKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH 241 P ES+ + +N+D LI +A +K + H ++ + N + ILTH+ Sbjct: 180 IPQESMIDFAENVDVLIHEATFTKDIKEKAFENGHTVAEDAAVIAKKANVEQLILTHLS 238 >gi|78184109|ref|YP_376544.1| ribonuclease Z [Synechococcus sp. CC9902] gi|123581993|sp|Q3AZH7|RNZ_SYNS9 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|78168403|gb|ABB25500.1| RNAse Z [Synechococcus sp. CC9902] Length = 319 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 82/310 (26%), Gaps = 107/310 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEM--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q LR ++ + V TH H DH+ G+ GL G +D+Y +L Sbjct: 42 QHQFLRSELRLSQLRRVFVTHMHGDHVFGLPGLLASLGLAGNSNEGVDLYGPDPLESYLN 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + R P + + + + + H R+ + +R Sbjct: 102 G----VLRTSSTRIGYP-LKVHRVHDCAENGTLVYEDDDLMVRCTPLTH-RVPAYAYRVD 155 Query: 180 --------NVA----------------------------------------------YCT 185 ++A YCT Sbjct: 156 QKPLAGRFDIAKAKDLQIPPGPIYAQLKRGDTVTLEDGRVIDGTTLCGPERPGVSVVYCT 215 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELIN 231 D F +++ Q D LI H S H + + + + N Sbjct: 216 DTV-FCEAAVDLAQGADLLI--------HESTFAHQESEMAYQKQHSTSTMAAQTAAEAN 266 Query: 232 PKNAILTHMH 241 +LTH+ Sbjct: 267 VGQLVLTHLS 276 >gi|261402848|ref|YP_003247072.1| hypothetical protein Metvu_0732 [Methanocaldococcus vulcanius M7] gi|261369841|gb|ACX72590.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7] Length = 267 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 94/295 (31%), Gaps = 75/295 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT------TVIVD 59 LGCG G W I++ G + VD Sbjct: 4 EIIFLGCG--------GGRWAT----------------ITQKKATGGFRIHTDELRLHVD 39 Query: 60 TGPD--FYMQVLREQVLSIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKRPI 106 GP + L+ +A+ +H H DH G+ RG FL + Sbjct: 40 PGPGAIVRLNELKISPWRTNALFISHCHPDHYTDGEVIVEAITQGMTKKRGIFLGSLSVV 99 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + + +H+ + YP + + Sbjct: 100 EGFGD---YEHVISKYHQSKLEEVKILYP---------------KDEVELYDTKIRATHT 141 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--NGLHSSHFSL 220 +HG +GFR G++ Y +D +E + LI + ++ N H Sbjct: 142 KHGDPFGIGFRLYTRYGDIGYTSDTEFISEL-IEDFDGVRILIANIVRKKNERIKGHLCS 200 Query: 221 SESLKKIELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 ++++ I + P+ I+THM + + + + + ++T V+PA G++ Sbjct: 201 NDAIDLINSMNKKPELLIMTHMGIKMTNPQLEAEYISQNTGVDVIPARLGLKIEL 255 >gi|289433641|ref|YP_003463513.1| metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169885|emb|CBH26425.1| metallo-beta-lactamase superfamily [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 276 Score = 67.1 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 79/249 (31%), Gaps = 56/249 (22%) Query: 39 RSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + ++VD G + QV R + +DA+L TH H+D Sbjct: 16 RFSILASGSSGNATLVETGDQKILVDCGLSGKKMEGLFAQVGR-DMSDLDAILITHEHSD 74 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ L +K + +YA + + I + Sbjct: 75 HIKGLG-----VLARKYKLPIYANAKTWQAMDNM---------------IGEVSSDQKFQ 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD- 202 + + G ++ H I + + F TD + D Sbjct: 115 FDMETVKSFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGYVSDRMKGHIAGADA 174 Query: 203 FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 +L ++ L+ G + H S + ++ E+I K L H+ D Sbjct: 175 YLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKD 234 Query: 244 LDYDMVLKS 252 + + + Sbjct: 235 NNMKELARM 243 >gi|299532406|ref|ZP_07045798.1| putative hydrolase [Comamonas testosteroni S44] gi|298719644|gb|EFI60609.1| putative hydrolase [Comamonas testosteroni S44] Length = 329 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 53/266 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PR+ G+ R +S+ + +VD Sbjct: 52 QLVLLGT---KGGPRVGGE-----------RSNPASVLLI------DGEPFVVDCAYGVA 91 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 Q+++ + + V TH H+DH G + + +DV+ P + + ++ Sbjct: 92 AQLVKAGIALPRLSKVFITHMHSDHNLEYGPLLYSAWAAGLRNQVDVWGPP-TLDAMTKA 150 Query: 122 FRYCFKALDDRTYP----PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGF 176 F K D P P + +V + + ++ + H I S Sbjct: 151 FMESMKFDIDIRIPDESKPDLRKMVKTHEFSKPGVILENDKVKVTAVRNIHPPIADSFAL 210 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLI--------IDA----------LKNGLH 214 RF +V + D P E + D L+ +DA LK L Sbjct: 211 RFDTKDRSVVFSGDTTYCP-AVAELAKGADVLVHEVIYVPAVDAMVKRVPNAATLKEHLL 269 Query: 215 SSHFSLSESLKKIELINPKNAILTHM 240 + H + + + K +L+H+ Sbjct: 270 ACHTTSVDVGRIAAAAGVKKLVLSHI 295 >gi|307729244|ref|YP_003906468.1| beta-lactamase domain-containing protein [Burkholderia sp. CCGE1003] gi|307583779|gb|ADN57177.1| beta-lactamase domain protein [Burkholderia sp. CCGE1003] Length = 257 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 59/251 (23%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L ++DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSAKEVERRLNRLGSSAEALDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I ++ + + + + ++ + + A Sbjct: 69 ALTLARKWSIPLFMSWGTARAV------------------GADEADVDLHVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GDLSVLPYTVPHDAREPLQYVFSNGVSRLGVLTDVGTSTPHISAVLSGCDALVLECNHDV 170 Query: 209 -----------LKNGLHSSHFSL-----SESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 LK + +H L +E L ++ ++ + H+ + + Sbjct: 171 GMLAGSRYPQSLKARIGGNHGHLNNDAAAEILASLDRSRLRHLVAAHLS-------LQNN 223 Query: 253 TPSRVVPAFDG 263 P A G Sbjct: 224 LPELAQAAMAG 234 >gi|242398813|ref|YP_002994237.1| Ribonuclease Z [Thermococcus sibiricus MM 739] gi|259494147|sp|C6A2P3|RNZ_THESM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|242265206|gb|ACS89888.1| Ribonuclease Z [Thermococcus sibiricus MM 739] Length = 306 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 91/308 (29%), Gaps = 93/308 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G G+ PT +N + ++ + ++ D G Sbjct: 2 LEVIFLGTG---GI----------MPTKERN--------VPAIALKYGGEIILWDIGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ I+ + TH H DH G+ L K++RP+ +Y + + Sbjct: 41 LRQLDTTKLSPMKIEKIFITHFHGDHYLGLMSLIQTMTLWKRERPLYIYGPKYTFEFIQN 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 L + P + E + + K E HG I +LG+ F Sbjct: 101 -------YLKSGFFRPSFEIHIHELGETRLKFKDY----EIWSFKVDHG-IPALGYVFKE 148 Query: 179 -----------------------------------GNVAYCTDVNAFPA----------- 192 G + Y DV P Sbjct: 149 NDKRGNFDVEKIRELGLKPGPWMKKLEIKGKIEINGKLIYLEDVTGEPKKGVKIVYTGDT 208 Query: 193 ESLEKLQ----NLDFLIIDA---LKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDL 244 E E+++ D LI +A + S H ++ E+ + + + L H Sbjct: 209 EQCERIKLFSERADLLIHEATYLSREDKGDSYHSTVEEACETAKRAKVELLALFHRAPRY 268 Query: 245 DYDMVLKS 252 Y+ ++ Sbjct: 269 KYEEYVQE 276 >gi|160945069|ref|ZP_02092295.1| hypothetical protein FAEPRAM212_02587 [Faecalibacterium prausnitzii M21/2] gi|158442800|gb|EDP19805.1| hypothetical protein FAEPRAM212_02587 [Faecalibacterium prausnitzii M21/2] Length = 262 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 54/225 (24%) Query: 50 RGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +IVD G L V +L TH H+DH+ G+ +K Sbjct: 19 RCGAQYLIVDMGKGVRTTTAALKSLGLAVSDCAGILVTHEHSDHVKGLS-----TFLKKN 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ VY A + L + P +E + I G Sbjct: 74 PMPVYGAAATLDFL----------DANDIVPANCELNTLEGREEDI------GCFGVQSF 117 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + +G+R + TD+ E L D + +++ L++G Sbjct: 118 PTSH-DVPCVGYRIHTPDDKTMTIATDLGTLTPPVHEALSGCDLVALESNYDLHMLRSGP 176 Query: 214 HS-----------SHFSLSES----LKKIELINPKNAILTHMHVD 243 + H S E L+ I+ K L H+ + Sbjct: 177 YPYYLRARIESVRGHLSNDECSAKLLELIQS-GCKKFALCHLSQE 220 >gi|188585080|ref|YP_001916625.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349767|gb|ACB84037.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 259 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 39/238 (16%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDG 94 + + S + E + D G + + + A+ TH H+DH+ + Sbjct: 21 KNSNCSGYLLTAGED----NFLFDCGNGVLSNLQNYLDLSQLSALFITHHHSDHVADLIA 76 Query: 95 LRGYFLKQKRP------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 LR + + + VY P + + YP + E D+ Sbjct: 77 LRHAYEDLQSRGEVTSKLPVYTPPYPQDTVA----------ELEEYPGFDIKFLAEGEDI 126 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLE---------KLQ 199 I K + + R+ ++ Y D NA+ E++E + Sbjct: 127 IIEDKKISWSVTNHFLYCAAYRVE---YKEKAFVYTGD-NAYDNETIEDNSTADIINLSK 182 Query: 200 NLDFLIIDAL-----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 D L+ +A K H S ++ + K+ +++H H D +L+ Sbjct: 183 GADLLLTEASLEEEWKKEPEKRHMSARDAASLAKEAQVKHMVISHFHPRADLRKLLRE 240 >gi|226311817|ref|YP_002771711.1| ribonuclease Z [Brevibacillus brevis NBRC 100599] gi|254808619|sp|C0ZBP8|RNZ_BREBN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|226094765|dbj|BAH43207.1| ribonuclease Z [Brevibacillus brevis NBRC 100599] Length = 318 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 87/293 (29%), Gaps = 84/293 (28%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG G+ G P R S R + G + D G Q Sbjct: 4 TFLGTGS--GAPT---------------TRRNVSGIGLRFLQAG--KWWLFDCGEGTQHQ 44 Query: 68 VLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFESF 122 +LR ++ +D + TH H DH++G+ GL R + P+++Y P L F Sbjct: 45 LLRAPMKISQLDKIFITHLHGDHLYGLIGLLASRSLRNTEPTPLELYGPP----GLDRYF 100 Query: 123 RYCFKALDDRTYPPIV-----NPIVIENNDVPICMKSAGGVIEAIPILQQ----HGRISS 173 R +A P+ ++ E+ ++ + + A + + G Sbjct: 101 RGIMEASPVHLQYPLEIKIVSEGVIYEDEEIVVSCRMAKHRVPSFAYAVMEKEKTGAFQV 160 Query: 174 L---------GFRFG-----------------------------NVAYCTDVNAFPAESL 195 G FG + + D L Sbjct: 161 ERAKQAGVPSGPLFGALKRGEQVTLEDGRVLDGKDFVGEPQPGRKIVFSGDT-EPSQAVL 219 Query: 196 EKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMH 241 E + D L+ +A H H + E+ + + K LTH Sbjct: 220 ELAKGADLLVHEAT-YAHHDKELATRSGHSTAREAAQIAKEAGVKELCLTHFS 271 >gi|295105676|emb|CBL03220.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Faecalibacterium prausnitzii SL3/3] Length = 262 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 54/225 (24%) Query: 50 RGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +IVD G L V +L TH H+DH+ G+ +K Sbjct: 19 RCGAQYLIVDMGKGVRTTTAALKSLGLAVSDCAGILVTHEHSDHVKGLS-----TFLKKN 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ VY A + L + P +E + I G Sbjct: 74 PMPVYGAAATLDFL----------DANDIVPANCELNTLEGREEDI------GCFGVQSF 117 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + +G+R + TD+ E L D + +++ L++G Sbjct: 118 PTSH-DVPCVGYRIHTPDDKTMTIATDLGTLTPPVHEALSGCDLVALESNYDLHMLRSGP 176 Query: 214 HS-----------SHFSLSES----LKKIELINPKNAILTHMHVD 243 + H S E L+ I+ K L H+ + Sbjct: 177 YPYYLRARIESVRGHLSNDECSAKLLELIQS-GCKKFALCHLSQE 220 >gi|120436820|ref|YP_862506.1| metallo-beta-lactamase domain-containing protein [Gramella forsetii KT0803] gi|117578970|emb|CAL67439.1| metallo-beta-lactamase domain protein [Gramella forsetii KT0803] Length = 245 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 82/254 (32%), Gaps = 66/254 (25%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++++ G +F + L + + +H H DH I I+ Sbjct: 18 ENDSEALLIECGVNFNEIKKALNFSFSKVSGAIVSHCHGDHAKSIKE------TMAAGIN 71 Query: 108 VYAAPDCMKHLFESFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A+ + + + ++++ Y G + P Sbjct: 72 VWASEATHEACGTTMHHRACMMMENQVY--------------------KIGNFQIKPFGV 111 Query: 167 QHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------- 208 +H + + GF G V + TD L N+ I++A Sbjct: 112 KH-DVPTFGFYIVHPDCGRVVFITDTKYC-EYVFPPLHNI---IVEANYSKEIIDQRVAN 166 Query: 209 ------LKNGLHSSHFSLSESLKKIE---LINPKNAILTHMHVDLDYD-----MVLKSTP 254 L+N + SH SL L+ ++ L N +L H+ ++ V T Sbjct: 167 GANPKFLRNRVIHSHLSLENCLEFLKANDLSQVNNIVLIHLSDGNSHEVNFKKAVENITG 226 Query: 255 SRVVPAFDGMQFSS 268 V A +GM+ + Sbjct: 227 KNVSVASNGMKINF 240 >gi|91784214|ref|YP_559420.1| putative metallo-beta-lactamase family protein [Burkholderia xenovorans LB400] gi|91688168|gb|ABE31368.1| Putative metallo-beta-lactamase family protein [Burkholderia xenovorans LB400] Length = 257 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L V +DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSAKEVERRLTRLGASVEGLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + I+ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADEADIDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + N + TDV L D L+++ Sbjct: 111 GDLSILPYTVPHDAREPLQYVLSNGASRLGVLTDVGTSTPHISAVLSGCDALVLECNHDV 170 Query: 209 -------------LKNGLHSSHFSLSESLKKIELI 230 + G + H + + + + + Sbjct: 171 RMLAGSRYPQSLKARIGGNHGHLNNEAAAEILASL 205 >gi|295676908|ref|YP_003605432.1| beta-lactamase domain protein [Burkholderia sp. CCGE1002] gi|295436751|gb|ADG15921.1| beta-lactamase domain protein [Burkholderia sp. CCGE1002] Length = 257 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S T V++D G L +DA+L TH H+DHI Sbjct: 14 ALLVEAHSGASTTRVLLDCGFSAREVERRLARLGASAEHLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + ++ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADDADVDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GELSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGTSTPHISAVLSGCDALVLECNHDV 170 Query: 209 -----LKNGL--------HSSHFSLSESLKKIELI 230 + + H + + + + + Sbjct: 171 QMLAGSRYPPSLKARIGGNHGHLNNDAAAEILASL 205 >gi|257416213|ref|ZP_05593207.1| ribonuclease Z [Enterococcus faecalis AR01/DG] gi|257158041|gb|EEU88001.1| ribonuclease Z [Enterococcus faecalis ARO1/DG] Length = 313 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGIADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|229549887|ref|ZP_04438612.1| ribonuclease Z [Enterococcus faecalis ATCC 29200] gi|255972671|ref|ZP_05423257.1| ribonuclease Z [Enterococcus faecalis T1] gi|312951623|ref|ZP_07770518.1| ribonuclease Z [Enterococcus faecalis TX0102] gi|229304960|gb|EEN70956.1| ribonuclease Z [Enterococcus faecalis ATCC 29200] gi|255963689|gb|EET96165.1| ribonuclease Z [Enterococcus faecalis T1] gi|310630340|gb|EFQ13623.1| ribonuclease Z [Enterococcus faecalis TX0102] gi|315152356|gb|EFT96372.1| ribonuclease Z [Enterococcus faecalis TX0031] gi|315158201|gb|EFU02218.1| ribonuclease Z [Enterococcus faecalis TX0312] gi|315168909|gb|EFU12926.1| ribonuclease Z [Enterococcus faecalis TX1341] gi|323480852|gb|ADX80291.1| ribonuclease Z [Enterococcus faecalis 62] Length = 313 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGIADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|219852567|ref|YP_002466999.1| ribonuclease Z [Methanosphaerula palustris E1-9c] gi|219546826|gb|ACL17276.1| ribonuclease Z [Methanosphaerula palustris E1-9c] Length = 313 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 88/294 (29%), Gaps = 76/294 (25%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG +L P AC L + R ++ T++ D G Sbjct: 4 ETMQVYFLGTAGALPSPLKN---PAC-------------LMVRRGAD-----TLLFDCGE 42 Query: 63 DFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF 119 Q++R + ++DA+ TH HADH G+ GL F+ + P+ +Y + Sbjct: 43 GAQQQMMRARTGFTVDAIFITHWHADHFLGVFGLVQTLSFMGRAEPLTIYGPEWVHEFAE 102 Query: 120 ESFR-----YCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + F + P +V P + + S G V+E P + R Sbjct: 103 DVRHMGKTQMRFVLKSEEVLPGMVVPFDGYTVRAFKTRHGITSVGYVLEEDPRPGRFDRE 162 Query: 172 SSL------GFRFGN--------------------------------VAYCTDVNAFPAE 193 ++ G FG V Y D Sbjct: 163 EAIRLGVKPGPLFGRLQRGEEVLVTVDGQERIVRPEQVVGVERPGRKVIYTGDTRPVIPA 222 Query: 194 SLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E + D L+ DA L H + E+ I + L H+ Sbjct: 223 VSEIGMDADLLVHDATYNDTDLARAKEVFHATAGEAADVARAIRARTLALIHIS 276 >gi|29376245|ref|NP_815399.1| AtsA/ElaC family beta-lactamase [Enterococcus faecalis V583] gi|227518882|ref|ZP_03948931.1| ribonuclease Z [Enterococcus faecalis TX0104] gi|227553497|ref|ZP_03983546.1| ribonuclease Z [Enterococcus faecalis HH22] gi|255975723|ref|ZP_05426309.1| ribonuclease Z [Enterococcus faecalis T2] gi|256961805|ref|ZP_05565976.1| ribonuclease Z [Enterococcus faecalis Merz96] gi|257090007|ref|ZP_05584368.1| ribonuclease Z [Enterococcus faecalis CH188] gi|257419418|ref|ZP_05596412.1| ribonuclease Z [Enterococcus faecalis T11] gi|293382868|ref|ZP_06628786.1| ribonuclease Z [Enterococcus faecalis R712] gi|293389645|ref|ZP_06634100.1| ribonuclease Z [Enterococcus faecalis S613] gi|307277941|ref|ZP_07559025.1| ribonuclease Z [Enterococcus faecalis TX0860] gi|312903441|ref|ZP_07762621.1| ribonuclease Z [Enterococcus faecalis TX0635] gi|312907661|ref|ZP_07766652.1| ribonuclease Z [Enterococcus faecalis DAPTO 512] gi|312910278|ref|ZP_07769125.1| ribonuclease Z [Enterococcus faecalis DAPTO 516] gi|41017546|sp|Q834G2|RNZ_ENTFA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29343708|gb|AAO81469.1| metallo-beta-lactamase, AtsA/ElaC family [Enterococcus faecalis V583] gi|227073673|gb|EEI11636.1| ribonuclease Z [Enterococcus faecalis TX0104] gi|227177367|gb|EEI58339.1| ribonuclease Z [Enterococcus faecalis HH22] gi|255968595|gb|EET99217.1| ribonuclease Z [Enterococcus faecalis T2] gi|256952301|gb|EEU68933.1| ribonuclease Z [Enterococcus faecalis Merz96] gi|256998819|gb|EEU85339.1| ribonuclease Z [Enterococcus faecalis CH188] gi|257161246|gb|EEU91206.1| ribonuclease Z [Enterococcus faecalis T11] gi|291079533|gb|EFE16897.1| ribonuclease Z [Enterococcus faecalis R712] gi|291081038|gb|EFE18001.1| ribonuclease Z [Enterococcus faecalis S613] gi|295113079|emb|CBL31716.1| RNAse Z [Enterococcus sp. 7L76] gi|306505338|gb|EFM74524.1| ribonuclease Z [Enterococcus faecalis TX0860] gi|310626689|gb|EFQ09972.1| ribonuclease Z [Enterococcus faecalis DAPTO 512] gi|310633317|gb|EFQ16600.1| ribonuclease Z [Enterococcus faecalis TX0635] gi|311289551|gb|EFQ68107.1| ribonuclease Z [Enterococcus faecalis DAPTO 516] gi|315147387|gb|EFT91403.1| ribonuclease Z [Enterococcus faecalis TX4244] gi|315150410|gb|EFT94426.1| ribonuclease Z [Enterococcus faecalis TX0012] gi|315169856|gb|EFU13873.1| ribonuclease Z [Enterococcus faecalis TX1342] gi|315576098|gb|EFU88289.1| ribonuclease Z [Enterococcus faecalis TX0309B] gi|315577751|gb|EFU89942.1| ribonuclease Z [Enterococcus faecalis TX0630] gi|315580672|gb|EFU92863.1| ribonuclease Z [Enterococcus faecalis TX0309A] gi|327535257|gb|AEA94091.1| ribonuclease Z [Enterococcus faecalis OG1RF] Length = 313 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 31/182 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R + + + + ER N + D G Sbjct: 1 MEIQFLGTGA--GVPA--------------KHRNVTGIALKLLDER--NAVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+L+ + I+ + TH H DHI G+ GL Q P+++Y + Sbjct: 43 QLQILKSSIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGIADFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S R + +YP + EN+ + + HG I+S G+R Sbjct: 103 SLR---VSQSRLSYPLKFIELTKEND-----VIFKDKQFTVRCNILDHG-ITSFGYRIEE 153 Query: 181 VA 182 A Sbjct: 154 AA 155 >gi|148546512|ref|YP_001266614.1| beta-lactamase domain-containing protein [Pseudomonas putida F1] gi|148510570|gb|ABQ77430.1| beta-lactamase domain protein [Pseudomonas putida F1] Length = 252 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSAAQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + I G +E Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGQSLRI-------------GSLEVTAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDLLARGHYPA 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + + N ++ +L H+ Sbjct: 175 FLKQRVGGMQGHLNNHQAARLVHELGWSNLQHLVLAHLS 213 >gi|49082232|gb|AAT50516.1| PA1012 [synthetic construct] Length = 253 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 82/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T ++VD G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILVDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + +E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPVELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGVATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + ++ ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLS 213 >gi|302331794|gb|ADL21987.1| metallo-beta-lactamase hydrolase [Staphylococcus aureus subsp. aureus JKD6159] Length = 260 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPVDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|107100453|ref|ZP_01364371.1| hypothetical protein PaerPA_01001478 [Pseudomonas aeruginosa PACS2] gi|254245285|ref|ZP_04938607.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|126198663|gb|EAZ62726.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] Length = 252 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPAELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGMATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + ++ ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLS 213 >gi|56965852|ref|YP_177586.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] gi|56912098|dbj|BAD66626.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] Length = 264 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 75/233 (32%), Gaps = 49/233 (21%) Query: 54 TTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G D Q + IDA+L TH H+DHI G+ +K + + Sbjct: 24 QRLLIDAGLTGKKLDELFQKIDRNPKDIDALLVTHEHSDHIKGVG-----VFARKHQVPI 78 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA K + + + + + G IE H Sbjct: 79 YANAKTWKAMEKQLGQL---------------SLDQKFEFGRETVKQFGDIEVESFGVSH 123 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS--- 215 + F F + TD+ + + D + ++ L+ G + Sbjct: 124 DAAEPMFFVFRHEGKKLVLATDMGYVSERIKKTVAGADTYVFESNHDMNMLRVGRYPWNV 183 Query: 216 --------SHFSLSE-SLKKIELINPKNA--ILTHMHVDLDYDMVLKSTPSRV 257 H S + ++ +++ K A L H+ +D + + T +V Sbjct: 184 KRRILSDLGHVSNEDAAMALTDVVEDKQANIYLAHLSLDNNMKELAHMTVKQV 236 >gi|313105955|ref|ZP_07792217.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] gi|310878719|gb|EFQ37313.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa 39016] Length = 252 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPAELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGVATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + ++ ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGRMQHLVLAHLS 213 >gi|218893028|ref|YP_002441897.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] gi|218773256|emb|CAW29068.1| Putative metal-dependent hydrolase [Pseudomonas aeruginosa LESB58] Length = 252 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPAELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGMATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 L G + H + +S + ++ + ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVKQLDWGGMQHLVLAHLS 213 >gi|154483590|ref|ZP_02026038.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] gi|149735500|gb|EDM51386.1| hypothetical protein EUBVEN_01294 [Eubacterium ventriosum ATCC 27560] Length = 273 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 89/232 (38%), Gaps = 47/232 (20%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +N++++VD G + ++ ++ +ID ++ TH H+DHI G+ +K Sbjct: 26 ENNNSSILVDVGISRKKAEEGLEFFGKKPENIDGIVITHEHSDHIKGLG-----VFLRKY 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + + + V+ + N + + IE +P+ Sbjct: 81 QVPVYATEGTINCILNN-----------KTVGKVDSDLF--NVIKPDRDFSIKDIELLPL 127 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH 214 H + +RF + A TD+ + + + LQNLD LI ++ L+ G + Sbjct: 128 HISHDAADPVCYRFFEKEKSCAVVTDLGEYDDKLVSSLQNLDAALIESNHDVNMLQTGPY 187 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKS 252 H S + + + K+ +L H+ + +Y + Sbjct: 188 PYSLKQRIWGNKGHLSNEACGRLLNRLLSDRLKHILLGHLSEENNYPELAYQ 239 >gi|257056886|ref|YP_003134718.1| metal-dependent hydrolase, beta-lactamase superfamily III [Saccharomonospora viridis DSM 43017] gi|256586758|gb|ACU97891.1| metal-dependent hydrolase, beta-lactamase superfamily III [Saccharomonospora viridis DSM 43017] Length = 259 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 28/205 (13%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLK--------QKRPIDVYAAPDCMKHLFESFRYCF 126 ++A++ +H H DH L ++ + V+A + L ++ Sbjct: 54 ELNALVLSHLHPDHCADFSALTVLRRYHPNPPYDPRRHRLPVHAPAEAPTRLANAYAPHE 113 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 + + + + I G P+ H S G R + A Sbjct: 114 AERQETDLSDVFDFRTLSPEPRRI------GPFTVTPVPVLHPT-ESFGVRITYGDVSFA 166 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILT 238 Y D A E +D L+ +A + H S +++ + +LT Sbjct: 167 YTGDT-GLCAALDELADGVDVLLCEASWTSGPDRPDGLHLSGAQAGELAARARVGRLLLT 225 Query: 239 HMHVDLDYDMVLKSTPSRVVPAFDG 263 H+ D D +L AFDG Sbjct: 226 HIPPWSDGDAILAEA----EAAFDG 246 >gi|164686472|ref|ZP_02210500.1| hypothetical protein CLOBAR_00037 [Clostridium bartlettii DSM 16795] gi|164604483|gb|EDQ97948.1| hypothetical protein CLOBAR_00037 [Clostridium bartlettii DSM 16795] Length = 263 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 76/235 (32%), Gaps = 51/235 (21%) Query: 53 NTTVIVDTG-PDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G Q + I + TH H+DHI G + +K I Sbjct: 22 DTGILIDAGLAGKRITSGIEQA-DFDIDKIQGIFITHEHSDHIKG-----AGIMSRKLDI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + +++ +ND + G ++ P Sbjct: 76 PIYANFKTWCGMKDKIGNI-----------KEENMIVFDNDKTYEL----GELKIRPFSI 120 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--------------- 207 H ++G+ ++ TD+ L+ ++++ Sbjct: 121 PHDSEDAVGYNIYSDKEKMSIATDIGYITDNIRNNLKGSKLVVLESNYDPNMLMMGSYTY 180 Query: 208 ALKNG--LHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 ALK H S E+ + ++ +L H+ + ++ + +T V Sbjct: 181 ALKKRVMSDGGHLSNEEAASFCTELVEGGTESILLAHLSKENNFPELAYATTKNV 235 >gi|239982003|ref|ZP_04704527.1| hypothetical protein SalbJ_21392 [Streptomyces albus J1074] gi|291453853|ref|ZP_06593243.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291356802|gb|EFE83704.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 249 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 53/253 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEA-----DGFQLLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +DAV +H HADH ID + + R + VY + Sbjct: 40 LGELQRHTGLYDLDAVFLSHLHADHC--IDMCAYFVARYYRHGDGPCDALPVYGPEGTQQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ P + + ++ + + G + H + + Sbjct: 98 RLITAYG----DSSAEHMPEVFDFRTLKEDAFDL------GPFRIRTVRVPH-PVEAYAI 146 Query: 177 RFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL----KNGLHSSHFSLSESLKKI 227 R ++ Y D P L+ L D + +A K + H + E+ + Sbjct: 147 RVEHDGRSLTYSGDTG--PCAELDALAAGTDLYLCEAAFTHGKENIPDLHLNGREAGESA 204 Query: 228 ELINPKNAILTHM 240 + +LTH+ Sbjct: 205 QRAGAGRLLLTHI 217 >gi|328882707|emb|CCA55946.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptomyces venezuelae ATCC 10712] Length = 250 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 77/250 (30%), Gaps = 46/250 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSADSAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + + R I VYA + Sbjct: 40 LGELQRHIGLYDLDAIFLSHLHADHC--IDMCGYFVARYYRHEGGRCDAIPVYAPEGAEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPI--VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L ++ + E + + +EA I +HG Sbjct: 98 RLTTAYADTPSPTSMSEVFDFRTLKSEAFEIGPFSVRTEKVCHPVEAYGIRVEHGG---- 153 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELI 230 ++ Y D + + D + +A K + S H + E+ + Sbjct: 154 ----RSLTYSGDT-GVCESLHKLAEGTDLFLCEASFTHGKEDIPSLHLNGREAGAEAARS 208 Query: 231 NPKNAILTHM 240 +LTH+ Sbjct: 209 AVGRLVLTHI 218 >gi|254239349|ref|ZP_04932672.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126171280|gb|EAZ56791.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 252 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 59/230 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S +S S+T +++D G ++ R + +DA+L TH HADHIHG++ Sbjct: 14 SALVS-----SSDTRILIDCGFPLREIIKRLARLGLSPAQLDAILVTHEHADHIHGVE-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L + I VY + + + E + Sbjct: 67 ---LLARHYQIPVYLSAGTLSGMRR------------------PVHPAELLRAGQRLAIR 105 Query: 156 GGVIEAIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ + + + S G R TD+ AE LE + +D L+++A Sbjct: 106 GLEVQVVGVSHDAREPTQFVLSDGQR--RFGMLTDLGMATAEVLECYRAVDALVVEANHD 163 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELINPKNA---ILTHMH 241 L G + H + +S + + ++ +L H+ Sbjct: 164 STMLAGGPYPYFLKARVGGSRGHLNNHQSAELVRQLDWGRMQHLVLAHLS 213 >gi|119961693|ref|YP_948292.1| hypothetical protein AAur_2571 [Arthrobacter aurescens TC1] gi|119948552|gb|ABM07463.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length = 265 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 71/263 (26%), Gaps = 57/263 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P +S + + +++D G Sbjct: 1 MKLTIVGCTGS--FPGPGS---------------PASCYLVTAHDGEREWKIVMDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHL 118 + R + IDA+ TH H DH + GL + + V+ + Sbjct: 44 LGAIQRYTDLEDIDAIFLTHLHPDHCMDLCGLHVAVRWKPGGWGRDRLPVWGPAATADRM 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA---GGVIEAIPILQQHGRISSLG 175 + Y ++P + E D + G P H + Sbjct: 104 ATA------------YGLDLDPGMHEEFDFTNWTELKPVTVGPFTVTPFAVNHPVEEAYA 151 Query: 176 FRFGN-------------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-----H 217 R + Y D ++ + + D + +A H Sbjct: 152 LRVTATEPGKDGVPVTRILTYSGDTDSCQGLE-DAARGSDLFLCEAAFEEGRDDGIKDVH 210 Query: 218 FSLSESLKKIELINPKNAILTHM 240 + + + K +LTH+ Sbjct: 211 LTGKRAGEAAMNAGAKRLLLTHI 233 >gi|291008640|ref|ZP_06566613.1| metal-dependent hydrolase [Saccharopolyspora erythraea NRRL 2338] Length = 256 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 83/277 (29%), Gaps = 52/277 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S P + SS + R + T +++D G Sbjct: 1 MELTVLGCSGSAPAPE-----------------SPSSGYLLRSGD----TRLVIDLGNGT 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYAAPDCM 115 + R ++A+L TH H DH L Y + +R + VYA + Sbjct: 40 MGPLQRWTDPFDVNALLLTHLHPDHCADFAPLAVYLRYRPNKPYDPTQRRMPVYAPREAP 99 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + + + P G E H + G Sbjct: 100 SRLAALYA------PSAEELGQTDLSDVFEFLEPPAEPVRVGDFEIRAFPVDH-LCPTWG 152 Query: 176 FRFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDA----LKNGLHSSHFSLSESLKK 226 R A+ D P++ + KL D L+ +A + H S ++ Sbjct: 153 LRIEAEDRVFAFTGDTG--PSDEIAKLAAGADVLLSEASWLDSPDQPAGVHLSGKQAGAA 210 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + +LTH D +L AFDG Sbjct: 211 AASAGVRRLLLTHYSPWTDQQALLGEARE----AFDG 243 >gi|290581190|ref|YP_003485582.1| hypothetical protein SmuNN2025_1664 [Streptococcus mutans NN2025] gi|254998089|dbj|BAH88690.1| hypothetical protein [Streptococcus mutans NN2025] Length = 258 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 64/206 (31%), Gaps = 36/206 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKR 104 +++D G ++ +E L +DAV+ +H H DH+ + LR YF L + Sbjct: 28 DGFQLLIDCGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYPKHLWTPK 87 Query: 105 PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y D Y F L E + G + Sbjct: 88 VLPIYGHDQDT---------YEFSKLTLDGVS--------EGRAYNVNGLEQIGPFDITF 130 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---LH 214 I H + R + D F + DF + D H Sbjct: 131 IKTVH-PVVCYAIRIVERTTGQIFVFTGDTGYFEDLD-KFAAGADFFLADVYLYEGNENH 188 Query: 215 SSHFSLSESLKKIELINPKNAILTHM 240 +H + E+ + K +LTHM Sbjct: 189 IAHLTTKEAGQIASAAKVKRLVLTHM 214 >gi|117928892|ref|YP_873443.1| beta-lactamase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117649355|gb|ABK53457.1| beta-lactamase domain protein [Acidothermus cellulolyticus 11B] Length = 245 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 76/281 (27%), Gaps = 54/281 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +T++GC S P SS + R +++D G Sbjct: 1 MRWTVIGCSGSFPGPANAC----------------SSYLVEHDGFR-----LLIDIGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + +DAV+ +H H DH L + + L Sbjct: 40 LGALQNFCDPRDVDAVVVSHLHGDHWL---DLVPLAYAR----PHHPDGRVPPSLPVLLP 92 Query: 124 -----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFR 177 Y D P+ + I + G I H ++ R Sbjct: 93 DPQPLYVLTGKDAAALRPVFDVRPI--------VDGEVGPFSVTFIPTVHPVNTYAMRIR 144 Query: 178 FG--NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSLSESLKKIELIN 231 G ++ Y D +D L+ +A G H + E+ + Sbjct: 145 VGGISIGYTADTAW-SDRLAPFFSGVDLLVAEATFPARENGPPGLHLTAVEAAELANRSG 203 Query: 232 PKNAILTHMHVDLD----YDMVLKSTPSRVVPAFDGMQFSS 268 +LTH+ LD Y + + RV A G Sbjct: 204 AGRLLLTHIPPWLDPQVQYADAVATFTGRVDLARPGWSVRL 244 >gi|317056456|ref|YP_004104923.1| ribonuclease Z [Ruminococcus albus 7] gi|315448725|gb|ADU22289.1| ribonuclease Z [Ruminococcus albus 7] Length = 304 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 79/278 (28%), Gaps = 72/278 (25%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 S V++D G + + + I+ +L TH HADH+ G+ G L ++ P+D Sbjct: 28 SGKAVLIDCGEGMQVALAAADIKISRIEMILITHNHADHVTGLPGLLLSMGNCSREEPLD 87 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + C + + + + I + + + Sbjct: 88 IYIPESAERVVRNLISVCGHLPFEYRLHKLPDTAAVSFTAEKIDPM-----LTISTLPLK 142 Query: 168 HGRISSLGFRF----------------------------GNVAYCTDVNAFPAES----- 194 H + LG+ F G D E Sbjct: 143 HS-VKCLGYSFLLEKKAVFQPEKAQELEIPVKLWRMLHSGEAVILDDGRTIQPEEVTGDK 201 Query: 195 ------------------LEKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIEL 229 ++ N D I + + H + ++ + + Sbjct: 202 RPPVKVTYITDTLPIREIVQFANNADLFICEGMYGDTDKKQSMNEKGHMLMQDACRLAKE 261 Query: 230 INPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDG 263 N K LTH +YD LK V+ + DG Sbjct: 262 ANVKELWLTHYSPAEKHPENYDKELKKLFPAVLISKDG 299 >gi|241663684|ref|YP_002982044.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ralstonia pickettii 12D] gi|240865711|gb|ACS63372.1| coenzyme PQQ biosynthesis protein B [Ralstonia pickettii 12D] Length = 305 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 106/316 (33%), Gaps = 68/316 (21%) Query: 7 FTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +LG A G P+ + CD P RT+SS+ I G + ++V+ Sbjct: 4 LRVLGSAAGGGFPQWNCNCRNCDGVRRGTVRATP---RTQSSIAI----GDGRHNWIVVN 56 Query: 60 TGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q+ L I V+ DH+ G+ LR + ++ + VYA Sbjct: 57 ASPDILAQLRSSPALQPARTPRDTGIVGVVLMDAQIDHVTGLLMLR----EHRQALPVYA 112 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L +F Y + + + + AIP+ + Sbjct: 113 SAAVISDLSTAFP---LTRMLSHYCGLDTRALALDGTAFSVPPLDDVALTAIPLESKAPP 169 Query: 171 I----------SSLGFRF-----GNVA-YCTDVNAFPAESLEKLQNLDFLIID--ALKNG 212 ++G R G A Y + ++L D +++D ++ Sbjct: 170 YSPSRNARRLGDNIGLRIVDRRSGRRAFYAPGLARVEPHVFDELGAADVVLVDGTCWQDD 229 Query: 213 LHSS------------HFSLSES---LKKIELINPKNAILTHMHVD---LDYDM-VLKST 253 + H + S + + ++ + +L H++ LD D + Sbjct: 230 EMLTLGFSTKTAADMGHLAQSGAGGMIDVLDQLPATRKVLIHINNTNPILDEDSPQRREL 289 Query: 254 PSR-VVPAFDGMQFSS 268 + + A+DGM+ S Sbjct: 290 DAHGIEVAYDGMEISL 305 >gi|125974812|ref|YP_001038722.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|256004931|ref|ZP_05429904.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281418734|ref|ZP_06249753.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|125715037|gb|ABN53529.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|255991111|gb|EEU01220.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281407818|gb|EFB38077.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|316941932|gb|ADU75966.1| beta-lactamase domain protein [Clostridium thermocellum DSM 1313] Length = 263 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 56/240 (23%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + + E+ + A+L +H H+DHI G + +K + Sbjct: 21 GKTKILIDAGLSGKKITEALVSIGEKPSELSAILVSHEHSDHIKG-----AGIISRKYDV 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND-VPICMKSAGGVIEAIPIL 165 +YA + + ++ P+ ++N + G + P Sbjct: 76 PIYANENTWAAMEN----------------LIGPVSVKNKMYFNTGREFEIGDVIINPFP 119 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H + +GF F + TD+ E LE ++ DFL+I++ LK G + Sbjct: 120 IPHDAVEPVGFNFFVENSKITTATDIGHMNRELLEYIEGSDFLLIESNHDIEMLKVGPYP 179 Query: 216 -----------SHFSLSESLKKIELINPKNA---ILTHMHV-----DLDYDMVLKSTPSR 256 H S + K + + + +L H+ +L Y+ V R Sbjct: 180 WPLKKRILGDKGHLSNEMAGKVVAHLAERGTRCFMLGHLSKENNFPELAYETVRNILKER 239 >gi|298491899|ref|YP_003722076.1| beta-lactamase domain-containing protein ['Nostoc azollae' 0708] gi|298233817|gb|ADI64953.1| beta-lactamase domain protein ['Nostoc azollae' 0708] Length = 308 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 85/253 (33%), Gaps = 44/253 (17%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +I D G ++ Q L Q+ + +TH H DH+ G F+K ++Y Sbjct: 41 GGKRLIFDCGTGVHVLGQSLLSQMPVEGHIFFTHSHWDHMQGFPFFSPAFIK-GNQFNIY 99 Query: 110 A----APDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ L + + P + + +++ I Sbjct: 100 GAIAPDGSTIEQRLNDQM-----LHPNFPVPLQIMQANLNFHNIKAGQPIQIDDIMIETR 154 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAE----SLEKLQNLDFLIIDALKN--GLH 214 H ++G+R G+ Y TD P + L +N D LI D+ H Sbjct: 155 HLNHPG-EAVGYRVNWHGGSAVYITDTEHLPEKLDQNVLWLARNADILIYDSTYTDDEYH 213 Query: 215 SS--------HFSLSESLKKIELINPKNAILTHMHVDLDYD---------MVLKSTPSRV 257 S H + E++K + N K ++ H D ++ V + P Sbjct: 214 SPKLPKIGWGHSTWQEAVKVAQAANVKTLVIYH--HDPGHNDDFLDNVGKQVFEKFP-GA 270 Query: 258 VPAFDGMQFSSPI 270 + A +G+ P+ Sbjct: 271 IMAREGLILQVPV 283 >gi|149179289|ref|ZP_01857851.1| hypothetical protein PM8797T_00472 [Planctomyces maris DSM 8797] gi|148841863|gb|EDL56264.1| hypothetical protein PM8797T_00472 [Planctomyces maris DSM 8797] Length = 244 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 86/251 (34%), Gaps = 55/251 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G +P RR + L + + +I D G F Sbjct: 1 MRIVLLGTGG----------------YHPNERRHTACLMLPELG-------LIFDAGTSF 37 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLF-E 120 Q L+ + L + TH H DHI G+ L Q + +Y + + Sbjct: 38 FRVQQFLQTRDLQ---IFLTHAHLDHIVGLSFFLVPMLTDQVDSVKLYGEASKLAAIQTH 94 Query: 121 SFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F F L D + P+ + + G+++ IP+ G + G+R Sbjct: 95 LFSEEIFPLLPDYEFTPLPETVSVREQ----------GILQHIPMEHPGGSV---GYRID 141 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIEL 229 ++AY TD P + LE ++ +D LI + + + H + + Sbjct: 142 WPGHSLAYITDTAN-PRQHLEFVKGVDLLIHECYFPDDMAEWADKTGHSHTTPVAELARD 200 Query: 230 INPKNAILTHM 240 +LTH+ Sbjct: 201 AQVGKLVLTHI 211 >gi|218778953|ref|YP_002430271.1| metal-dependent hydrolase [Desulfatibacillum alkenivorans AK-01] gi|218760337|gb|ACL02803.1| metal-dependent hydrolase [Desulfatibacillum alkenivorans AK-01] Length = 279 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 72/220 (32%), Gaps = 40/220 (18%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------Q 102 + +++D G Q++ EQ D ++TH H DH+ G + ++K Q Sbjct: 35 NGHVIVIDAGTGIRRLGNQLMEEQRFEYD-FIFTHAHWDHLMGFPFFKPLYVKSAKIRMQ 93 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK-SAGGVIEA 161 P +A K + +P N I E P+C I Sbjct: 94 GCP---FARQYVEKLISRVMA-------PPNFPIRPNAIQAEVEYEPVCPTSFEIDSITV 143 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTD-VNAFP-------AESLEKLQNLDFLIIDA- 208 PI H S G++F + TD FP + L Q D LI DA Sbjct: 144 TPIPLTHPNGGS-GYKFEEDGKTFVFLTDNELDFPHNNAKSFEDYLAFCQGADLLIHDAE 202 Query: 209 LKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVD 243 + + H ++ K L H++ D Sbjct: 203 FTPKEYETTCGWGHSVYPRVVELAVQAGVKELGLFHLNQD 242 >gi|313497591|gb|ADR58957.1| Beta-lactamase domain-containing protein [Pseudomonas putida BIRD-1] Length = 252 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSAAQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + I G +E Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGQSLRI-------------GSLEVTAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVVSDGRRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDLLARGHYPA 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + + N ++ +L H+ Sbjct: 175 FLKQRVGGMQGHLNNHQAARLVHELGWSNLQHLVLAHLS 213 >gi|300782768|ref|YP_003763059.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Amycolatopsis mediterranei U32] gi|299792282|gb|ADJ42657.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Amycolatopsis mediterranei U32] Length = 252 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 34/205 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSI-DAVLYTHPHADHIHGIDGL-RGYFLKQK-----R 104 + V++D G ++ + DAV+ TH H DH + L R + + Sbjct: 32 NGFRVVLDLGYGAAPRLFTHCRDGLPDAVVVTHEHPDHCADVSALGRAWHYTVQAGAPAA 91 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++ P ++ L +AL+ +P + E +D+ G P Sbjct: 92 RLPLHCTPGTVRRL--------EALEPHPHPETL----FEVHDLAEPAD--IGPFRMTPY 137 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSH-- 217 H + + G R VAY D P+ L L ++ D LI DA Sbjct: 138 PLPHHQ-PNFGVRLTAPGLTVAYTGDTG--PSPLLAALGRDADLLICDATLRTPPPEGEP 194 Query: 218 ---FSLSESLKKIELINPKNAILTH 239 + +E+ + + +LTH Sbjct: 195 RYLMTAAEAGHWAQRAAARRLLLTH 219 >gi|157692882|ref|YP_001487344.1| ribonuclease Z [Bacillus pumilus SAFR-032] gi|157681640|gb|ABV62784.1| ribonuclease Z [Bacillus pumilus SAFR-032] Length = 309 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 84/313 (26%), Gaps = 94/313 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P K R + + D G Sbjct: 1 MELLFLGTGA--GIP-------------AKTRNVTCTAL---KLLEERKAVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + ID + TH H DH++G+ GL G Q + +Y + Sbjct: 43 QHQILHTTIKPRKIDKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTIYGPKGIKAFVNA 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + TYP +IE ++ + + HG I + G+R Sbjct: 103 TLS---ATQTHLTYP----LHIIEIDEGVVFEDD---TFQVEARRVSHG-IPAYGYRVVE 151 Query: 179 ----GNVAYCTDVNAF---PAESLEKLQNLDFL------IIDALKNGLHSS--------- 216 G + D+ P +KL+N D + IID Sbjct: 152 KDVPGALK-AEDLKEIGVKPGPLYQKLKNGDTVTLEDGRIIDGTDYLEPPKKGRIVAFSG 210 Query: 217 ------------------------------------HFSLSESLKKIELINPKNAILTHM 240 H + ++ K + K ILTH+ Sbjct: 211 DTRLCENITRLAKDADVLVHEATFGKEDADLAYNYYHSTTEQAAKTAQEAGAKRLILTHI 270 Query: 241 HVDLDYDMVLKST 253 + L Sbjct: 271 SARYQGEEALNQL 283 >gi|300088151|ref|YP_003758673.1| metallo-beta-lactamase family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527884|gb|ADJ26352.1| metallo-beta-lactamase family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 258 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 83/243 (34%), Gaps = 35/243 (14%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 + + +D G + + S++A+L TH H DHI + L + IDVY Sbjct: 24 DDRLALDAGALTR-NMSSSTMFSLEAILLTHGHFDHIRDLPSLGMNLYLAGKSIDVYGNQ 82 Query: 113 DCMKHLFESFRYCF-------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++L YC + L+ P VIE D + + A P Sbjct: 83 QTKENLT----YCLLNGTMYSRFLEKPAEAPTFRYHVIEP-DTEFTVSEYEILTAATPHS 137 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID-----------ALKNGLH 214 Q G + Y D A+ +++ D L+ + A K G H Sbjct: 138 QPSHGYQVTGADGKKLFYTGDTGPGLADCFQRVS-PDLLVTEVTAPSRLTDFFASKEGQH 196 Query: 215 SSHFSLSESLKKIELIN---PKNAILTHMHVDLDYD------MVLKSTPSRVVPAFDGMQ 265 + L L + + P+ A HM ++ + + +R+ A +GM Sbjct: 197 LTPELLKRELLEFRRLKGYLPEVA-CIHMSPSIEEEISGEIAELAIELNARIYLAQEGMT 255 Query: 266 FSS 268 + Sbjct: 256 VTV 258 >gi|254527009|ref|ZP_05139061.1| ribonuclease Z [Prochlorococcus marinus str. MIT 9202] gi|221538433|gb|EEE40886.1| ribonuclease Z [Prochlorococcus marinus str. MIT 9202] Length = 312 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNVTFLGT--SSGVPSLT---------------RNVSSLALKLSQSSEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I++Y + + Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSKGIEIYGPSELRSFINS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + F L +YP +N + +EN + I+ +H +I + G+R Sbjct: 102 ALKSSFCKL---SYP--LNFVEVENYASKSKILFENNKIKVNCACLKH-KIPAYGYRV 153 >gi|70725023|ref|YP_251937.1| hypothetical protein SH0022 [Staphylococcus haemolyticus JCSC1435] gi|68445747|dbj|BAE03331.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 266 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 45/243 (18%), Positives = 85/243 (34%), Gaps = 51/243 (20%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G D + Q+ R + ++ +L TH H+DHI G+ L +K Sbjct: 22 ESDKGSLLVDVGLTGKKMEDLFSQIDR-NIKDLNGILVTHEHSDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 76 YGLPIYANENTWKAIEK----------KDSKIPMDQKFIFNPYE---TKSIAGFDIES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H S ++ L ++I N K L+H+ D + + + + S+V+ Sbjct: 181 YPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVSQVLN 240 Query: 260 AFD 262 D Sbjct: 241 EHD 243 >gi|113476450|ref|YP_722511.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101] gi|110167498|gb|ABG52038.1| beta-lactamase-like [Trichodesmium erythraeum IMS101] Length = 304 Score = 66.7 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 84/234 (35%), Gaps = 31/234 (13%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +N +I D G ++++E + I+A V +TH H DHI G + Sbjct: 62 ANNRLIFDGGTGIRELGKELMQE--MPIEAYVFFTHYHWDHIQGFPLFTP-AFTRGNCFH 118 Query: 108 VYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y A P + + + F ++ P + ++ K IE Sbjct: 119 IYGAIPPKGESMKKHFMDRV-LHNNSPIPLKDMQADLRFYELEHGQKMMLHNIEIETGSL 177 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDALKN--GLHSS 216 H ++G+R + YC+D FP + + D LI DA+ H+ Sbjct: 178 NHPN-KAIGYRVTWNGRSAVYCSDTEHFPEGLDENVVYLARGADVLIYDAMYTDDEYHNP 236 Query: 217 --------HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAF 261 H + E++K + K ++ H + + D L +V AF Sbjct: 237 KSSKVGWGHSTWQEAIKVAKAAGVKQLVI--FHHEPGHSDDFLDGMAEKVKAAF 288 >gi|320141440|gb|EFW33283.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144422|gb|EFW36187.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 218 >gi|325694848|gb|EGD36753.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK150] Length = 266 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 92/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLSEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADAYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|256957970|ref|ZP_05562141.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256948466|gb|EEU65098.1| conserved hypothetical protein [Enterococcus faecalis DS5] Length = 246 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 25 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 82 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 83 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 126 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 127 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 184 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 185 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 224 >gi|229917481|ref|YP_002886127.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229468910|gb|ACQ70682.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 263 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 72/221 (32%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G ++ + IDA+L TH H+DHI G+ L +K + Sbjct: 22 ERTKLLVDAGLTGKAMQQRIEAIGRSFDGIDALLVTHEHSDHIKGVG-----ILARKYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + AL IE DV G IE Sbjct: 77 PIYANAKTWAAMESLIGKIDPALK----------FQIEVGDVK-----QFGDIEIETFNV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + ++F +A+ TD ++ D I + L+ G + Sbjct: 122 SHDAADPMFYQFAHDGKRLAHITDTGYVSDRMKGIIRGADDFIFESNHDVSMLQMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + ++ E+I K L H+ D Sbjct: 182 SVKRRILGDYGHVSNEDAAIAMSEVIGDRTKRIYLAHLSKD 222 >gi|328946753|gb|EGG40891.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1087] Length = 266 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 93/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + A TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFAMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADLAVGHD 249 >gi|242372581|ref|ZP_04818155.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] gi|242349798|gb|EES41399.1| beta-lactamase [Staphylococcus epidermidis M23864:W1] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 70 YNLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDIES-- 114 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F N TD ++ D + +D L+ Sbjct: 115 FNVSHDAIDPQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFMFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 175 YPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 218 >gi|229816589|ref|ZP_04446888.1| hypothetical protein COLINT_03647 [Collinsella intestinalis DSM 13280] gi|229807924|gb|EEP43727.1| hypothetical protein COLINT_03647 [Collinsella intestinalis DSM 13280] Length = 294 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 75/232 (32%), Gaps = 67/232 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + H ILG G+ R + G +++D G Sbjct: 24 RHALHLHILGSGS----------------------RGNC-ALVE-----GPEGLIMIDNG 55 Query: 62 PD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 M L + A++ TH H DH+ GI F ++A+ Sbjct: 56 FARCKVLDRMHELGLDERDVRALILTHEHTDHVSGISVWVKIFNGL-----LFASEGT-- 108 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 +D R Y ++ D ++ AG IE P H ++ +GF Sbjct: 109 ------------VDGRKYLSCLDFETFTPGD---ALEVAGVRIETFPTS--HDVVNPVGF 151 Query: 177 RF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF 218 RF + Y TD P ++E L + L +++ L+ G + H Sbjct: 152 RFSCAGDAIGYATDTGMLPPRAMELLADARILALESNHDTQMLRCGPYPRHL 203 >gi|195333091|ref|XP_002033225.1| GM20540 [Drosophila sechellia] gi|194125195|gb|EDW47238.1| GM20540 [Drosophila sechellia] Length = 743 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 97/302 (32%), Gaps = 72/302 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 433 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 472 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGI-----------DGLRGYFLKQKRPI 106 Q++R + + + +H HADH G+ L R I Sbjct: 473 GQIVRLYGHEKGHLILRQLQTIYVSHLHADHHIGLIGLLQERRQLEPRADPLILLAPRQI 532 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV-------IENNDVPICMKSAGGVI 159 + + + Y + P+ V I V C S G + Sbjct: 533 EPWLEFYNRQIETVEDAYTLVGNGELLASPLSGEHVEPLGITSISTCLVRHCPNSFGISL 592 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDAL------KNG 212 + +H + Y D P + ++ ++ LI +A K Sbjct: 593 T---LAAKHNSEPI------KITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDLEKEA 641 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDGMQFS 267 +H ++S+++++ +N ++ ILTH Y PS RV AFD M+ + Sbjct: 642 RLKTHSTVSQAIQQGRNMNARHTILTHFSQR--YAK-CPRLPSDEDMQRVAIAFDNMEVT 698 Query: 268 SP 269 Sbjct: 699 IE 700 >gi|6689210|emb|CAB65404.1| YycJ protein [Staphylococcus aureus] Length = 269 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 25 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 78 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 79 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 123 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 124 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 183 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 184 YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 227 >gi|223043367|ref|ZP_03613413.1| YycJ [Staphylococcus capitis SK14] gi|222443156|gb|EEE49255.1| YycJ [Staphylococcus capitis SK14] Length = 263 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 19 ESEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + K + + + P+ + + AG IE+ Sbjct: 73 YNLPIYANENTWKAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F N TD ++ D + +D L+ Sbjct: 118 FNVSHDAIDPQFYIFNNNYKKFTMLTDTGYVSDRMKGMIRGSDAFMFESNHDVDMLRMCR 177 Query: 214 HS-----------SHFSLSES-LKKIELI--NPKNAILTHMHVD 243 + H S ++ L ++I N K L+H+ D Sbjct: 178 YPWKTKQRILSDMGHVSNEDAGLAMTDVITGNTKRIYLSHLSQD 221 >gi|57651131|ref|YP_184934.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus COL] gi|87160913|ref|YP_492744.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193845|ref|YP_498630.1| hypothetical protein SAOUHSC_00024 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220233|ref|YP_001331056.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161508288|ref|YP_001573947.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451345|ref|ZP_05699376.1| metallo-beta-lactamase YycJ [Staphylococcus aureus A5948] gi|262049452|ref|ZP_06022324.1| hypothetical protein SAD30_1379 [Staphylococcus aureus D30] gi|262051889|ref|ZP_06024104.1| hypothetical protein SA930_0843 [Staphylococcus aureus 930918-3] gi|282920741|ref|ZP_06328460.1| ribonuclease Z [Staphylococcus aureus A9765] gi|284023059|ref|ZP_06377457.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus 132] gi|294849850|ref|ZP_06790590.1| ribonuclease Z [Staphylococcus aureus A9754] gi|57285317|gb|AAW37411.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus COL] gi|87126887|gb|ABD21401.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201403|gb|ABD29213.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373033|dbj|BAF66293.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160367097|gb|ABX28068.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860875|gb|EEV83692.1| metallo-beta-lactamase YycJ [Staphylococcus aureus A5948] gi|259160216|gb|EEW45245.1| hypothetical protein SA930_0843 [Staphylococcus aureus 930918-3] gi|259162449|gb|EEW47019.1| hypothetical protein SAD30_1379 [Staphylococcus aureus D30] gi|282594149|gb|EFB99137.1| ribonuclease Z [Staphylococcus aureus A9765] gi|294823398|gb|EFG39827.1| ribonuclease Z [Staphylococcus aureus A9754] gi|315197940|gb|EFU28273.1| beta-lactamase [Staphylococcus aureus subsp. aureus CGS01] gi|329731618|gb|EGG67978.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329732650|gb|EGG69000.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 266 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 22 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 76 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 181 YPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQD 224 >gi|29377218|ref|NP_816372.1| hypothetical protein EF2742 [Enterococcus faecalis V583] gi|255971859|ref|ZP_05422445.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255974856|ref|ZP_05425442.1| AtsA/ElaC family protein [Enterococcus faecalis T2] gi|256616755|ref|ZP_05473601.1| AtsA/ElaC family protein [Enterococcus faecalis ATCC 4200] gi|256961011|ref|ZP_05565182.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256963848|ref|ZP_05568019.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257079907|ref|ZP_05574268.1| AtsA/ElaC family protein [Enterococcus faecalis JH1] gi|257081695|ref|ZP_05576056.1| AtsA/ElaC family protein [Enterococcus faecalis E1Sol] gi|257084292|ref|ZP_05578653.1| metallo-beta-lactamase [Enterococcus faecalis Fly1] gi|257087709|ref|ZP_05582070.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|257090981|ref|ZP_05585342.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257416912|ref|ZP_05593906.1| AtsA/ElaC family protein [Enterococcus faecalis AR01/DG] gi|257420132|ref|ZP_05597126.1| AtsA/ElaC family protein [Enterococcus faecalis T11] gi|257421646|ref|ZP_05598636.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294779734|ref|ZP_06745122.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|300860669|ref|ZP_07106756.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|29344684|gb|AAO82442.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|255962877|gb|EET95353.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255967728|gb|EET98350.1| AtsA/ElaC family protein [Enterococcus faecalis T2] gi|256596282|gb|EEU15458.1| AtsA/ElaC family protein [Enterococcus faecalis ATCC 4200] gi|256951507|gb|EEU68139.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256954344|gb|EEU70976.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|256987937|gb|EEU75239.1| AtsA/ElaC family protein [Enterococcus faecalis JH1] gi|256989725|gb|EEU77027.1| AtsA/ElaC family protein [Enterococcus faecalis E1Sol] gi|256992322|gb|EEU79624.1| metallo-beta-lactamase [Enterococcus faecalis Fly1] gi|256995739|gb|EEU83041.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256999793|gb|EEU86313.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257158740|gb|EEU88700.1| AtsA/ElaC family protein [Enterococcus faecalis ARO1/DG] gi|257161960|gb|EEU91920.1| AtsA/ElaC family protein [Enterococcus faecalis T11] gi|257163470|gb|EEU93430.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294453225|gb|EFG21639.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|295113680|emb|CBL32317.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Enterococcus sp. 7L76] gi|300849708|gb|EFK77458.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|323481665|gb|ADX81104.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] Length = 246 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 25 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 82 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 83 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 126 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 127 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 184 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 185 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 224 >gi|312900103|ref|ZP_07759419.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|311292738|gb|EFQ71294.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|149276254|ref|ZP_01882398.1| ribonuclease Z [Pedobacter sp. BAL39] gi|149232774|gb|EDM38149.1| ribonuclease Z [Pedobacter sp. BAL39] Length = 303 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 35/182 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + TILG ++ P R ++ ++ + ++D Sbjct: 1 MK--FEVTILGSSSAT--PVYN--------------RNPTAQLLNC-----NEKFYLIDC 37 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G Q++R + ID + +H H DH G+ GL R PI ++A M+ Sbjct: 38 GEGTQQQLIRYGIKASKIDYIFISHLHGDHYFGLIGLLSTMHLNGRIKPIYIFAPGPLME 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L FR+ + Y P+V + + + + I+ H RI GF Sbjct: 98 ILELQFRH---SETVIRYDIEFVPLVADVSRTIFENQ----DVSVESIVLNH-RIPCTGF 149 Query: 177 RF 178 +F Sbjct: 150 KF 151 >gi|327461012|gb|EGF07345.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1057] Length = 266 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 92/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLSEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADAYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|90418800|ref|ZP_01226711.1| coenzyme PQQ (Pyrroloquinoline quinone) biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] gi|90336880|gb|EAS50585.1| coenzyme PQQ (Pyrroloquinoline quinone) biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] Length = 318 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 78/230 (33%), Gaps = 32/230 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++LG A G P+ C + R + + S + ++++ PD Sbjct: 14 RLRLSVLGSAAGGGYPQWNCLCDVCRLYWTGDTRVSARSQSSIAATADGENWLLLNASPD 73 Query: 64 FYMQVLREQVLS--------------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 Q++R +S I AVL T+ DH+ G+ L++K+ +Y Sbjct: 74 LREQIMRSPPISPMAGAADTARRASPIGAVLVTNGDVDHVAGL-----LTLREKQNFPLY 128 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + ++ F LD + VP V +P+ + G Sbjct: 129 GTAGVLDVIQQNP--IFSVLDPACVERRPVAVGQAFEPVPGLEVEIFSVPGKVPLYLEKG 186 Query: 170 RIS-------SLGFRF---GNVA-YCTDVNAFPAESLEKLQNLDFLIIDA 208 + ++G R G A Y A E+++ D L+ D Sbjct: 187 EVDVGEEGEMTVGVRLTAHGQTAYYIPGCAAVTEPLRERVRGADALLFDG 236 >gi|15606733|ref|NP_214113.1| hypothetical protein aq_1625 [Aquifex aeolicus VF5] gi|2983972|gb|AAC07519.1| hypothetical protein aq_1625 [Aquifex aeolicus VF5] Length = 249 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 22/196 (11%) Query: 58 VDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPD 113 VD GP Y+ L ID ++ +H H DH ++ L R + ++A Sbjct: 36 VDPGPGAFVYLHQLGIDYKKIDLIVLSHLHLDHSADVNTLIEAATNGGKYRNLSLFAPKS 95 Query: 114 CMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 ++ F Y + L E ++A+ I +H R Sbjct: 96 ALEGADRVVFPYNRRRLVKE-----------ETFSEGSEHHYKNWKVKAV-IKHKHHRTE 143 Query: 173 SLG-FRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL--KNGLHSSHFSLSESLKKIE 228 + G F V Y + F L +N D +II+ + + H S ++ I Sbjct: 144 TYGLFLQNKVVYVS-CAGFEERMLTLYPKNADLMIINTTFYRKRPNVEHLSAEDAKVLIS 202 Query: 229 LINPKNAILTHMHVDL 244 + PK A++TH +++ Sbjct: 203 HLKPKKAVITHYSMEM 218 >gi|315035114|gb|EFT47046.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0027] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|257053254|ref|YP_003131087.1| ribonuclease Z [Halorhabdus utahensis DSM 12940] gi|256692017|gb|ACV12354.1| ribonuclease Z [Halorhabdus utahensis DSM 12940] Length = 307 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 90/336 (26%), Gaps = 101/336 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S VP R S++ + R ER ++ D G Sbjct: 1 MRVTFLGT--SGAVPTT--------------ERNPSAVMVRREGER-----LLFDCGEGT 39 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFES 121 Q++ + + +H H DH+ GI GL F +++ P+ ++A L Sbjct: 40 QRQMMHFGTGFDVAHIFVSHMHGDHVLGIPGLLQTMDFNEREEPLAIHAPHGTRSQLEAL 99 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----- 176 D +YP + + P + E I +H R SLG+ Sbjct: 100 IG---ATGDRPSYPLRIT------QNGPGDVVLDANEYEVQAIETEH-RTQSLGYALVED 149 Query: 177 ----RFGN---------------------------------------------VAYCTDV 187 RF V Y D Sbjct: 150 DRKGRFDRETAENELGIEPGPKYSKLHAGEAVEHDGRTIQPEEVVGPPRPGRTVVYTGDT 209 Query: 188 NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D LI D + H + E+ K LTH+ Sbjct: 210 RPV-EAVRRASEDADLLIHDGTFGDDRAARARRTGHSTAREAGSLAAEAGAKRLALTHIS 268 Query: 242 V------DLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 D + ++ A DG P P Sbjct: 269 TRYAGRSDQLLEEAREAFGEAAFVAADGQSIDVPYP 304 >gi|268315990|ref|YP_003289709.1| ribonuclease Z [Rhodothermus marinus DSM 4252] gi|262333524|gb|ACY47321.1| ribonuclease Z [Rhodothermus marinus DSM 4252] Length = 326 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 88/271 (32%), Gaps = 80/271 (29%) Query: 37 RTR--SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI 92 RTR SSL + R ++ D G ++L ++ ++A+ TH H DH G+ Sbjct: 17 RTRHLSSLALWRAG-----RLLLFDCGEGTQYRLLAAELKAPRLEAIFITHFHGDHFFGL 71 Query: 93 DGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 GL L + P+ V ++ L ES A PI + E + + Sbjct: 72 FGLLATLAMLNRTEPLVVVGPEG-IERLIESMPGLSGAERGF---PIRYVELAEGFEHAV 127 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGN------------------------------ 180 ++ V+ A P+ R+ ++G+RF Sbjct: 128 VFETPDYVVTARPVEH---RVFTVGYRFEERTRPGRLHVERARALGVTEPEQYRALKEGR 184 Query: 181 -----------------------VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS 216 AY TD P E+ L + +D L +A +H + Sbjct: 185 PVQVGDRWVRPEEVLGPPIPGRTFAYLTDTR--PCENGRLLAEGVDLLYHEATFGEVHHA 242 Query: 217 ------HFSLSESLKKIELINPKNAILTHMH 241 H + E+ + + +L H Sbjct: 243 LAVERGHATAREAAELAREAGARRLLLGHFS 273 >gi|300789524|ref|YP_003769815.1| beta-lactamase [Amycolatopsis mediterranei U32] gi|299799038|gb|ADJ49413.1| beta-lactamase [Amycolatopsis mediterranei U32] Length = 255 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 84/272 (30%), Gaps = 52/272 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S +P + A S + ++ G Sbjct: 1 MRLTILGC--SGSIP--GPNAAA------------SGYLVEAEGFLLG-----LELGNGT 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-----------IDVYAAP 112 Q+ +DA++ TH H DH + + ++ + +YA P Sbjct: 40 LAQLQSVADPFDLDALVLTHLHPDHCA---DVSALTVLRRYHPAPPYPARPRLLPLYAPP 96 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D L ++ + T + + + + S G E + + H Sbjct: 97 DAPVRLANAYA------PNETERAVTDLSDVYDFRPLRPEPSRIGPFEVVAVEVDHPT-P 149 Query: 173 SLGFRF---GNV-AYCTDVNAFPAESLEKLQNLDFLIIDALK----NGLHSSHFSLSESL 224 + G R G + A+ D PA + E +D L+ +A H S ++ Sbjct: 150 AYGLRISYGGRILAFTGDTGPCPALN-ELADGVDLLLAEASWTDSAERPIGVHLSGKQAG 208 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 + +LTH+ D VL + Sbjct: 209 ELARDAGVGRLLLTHIAPWTDAGAVLAEASAG 240 >gi|330721527|gb|EGG99565.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC2047] Length = 257 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 53/221 (23%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++T +++D G + +Q L + ++A+L TH H+DHI G+ L +K Sbjct: 18 EAADTCLLLDCGFTVKETEARLQRLGKTGHDLNAILVTHEHSDHIKGVGALA-----RKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY P + I + + P+ Sbjct: 73 QLPVYLTAGTFHR------------GRLGKLPRLETINCHQH-------FVIDNVHVQPV 113 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + F + TD+ + + LD L+++ L G + Sbjct: 114 PVPHDAREPCQYVFQYNQKKLGVLTDLGSLTPHVEKHYSGLDALVLECNYDPQMLDEGPY 173 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S ++ + + I ++ +L+H+ Sbjct: 174 PFQLKERIFSDYGHLSNGQAAQLLSRIEKGKLQHLLLSHIS 214 >gi|227519473|ref|ZP_03949522.1| metal-dependent hydrolase [Enterococcus faecalis TX0104] gi|227554227|ref|ZP_03984274.1| metal-dependent hydrolase [Enterococcus faecalis HH22] gi|229544874|ref|ZP_04433599.1| metal-dependent hydrolase [Enterococcus faecalis TX1322] gi|229549141|ref|ZP_04437866.1| metal-dependent hydrolase [Enterococcus faecalis ATCC 29200] gi|293384601|ref|ZP_06630466.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|293386739|ref|ZP_06631310.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|307269228|ref|ZP_07550582.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|307271794|ref|ZP_07553065.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|307276979|ref|ZP_07558089.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|307278672|ref|ZP_07559740.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|312902567|ref|ZP_07761773.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|312906425|ref|ZP_07765433.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|312951917|ref|ZP_07770805.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|312979416|ref|ZP_07791104.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|227073085|gb|EEI11048.1| metal-dependent hydrolase [Enterococcus faecalis TX0104] gi|227176627|gb|EEI57599.1| metal-dependent hydrolase [Enterococcus faecalis HH22] gi|229305766|gb|EEN71762.1| metal-dependent hydrolase [Enterococcus faecalis ATCC 29200] gi|229310042|gb|EEN76029.1| metal-dependent hydrolase [Enterococcus faecalis TX1322] gi|291078059|gb|EFE15423.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|291083742|gb|EFE20705.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|306504612|gb|EFM73814.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|306506402|gb|EFM75562.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|306511672|gb|EFM80671.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|306514447|gb|EFM83008.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|310627579|gb|EFQ10862.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|310630106|gb|EFQ13389.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|310634237|gb|EFQ17520.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|311287787|gb|EFQ66343.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|315025491|gb|EFT37423.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2137] gi|315032593|gb|EFT44525.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0017] gi|315143864|gb|EFT87880.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2141] gi|315148704|gb|EFT92720.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4244] gi|315154293|gb|EFT98309.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0031] gi|315155604|gb|EFT99620.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0043] gi|315162092|gb|EFU06109.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0645] gi|315165311|gb|EFU09328.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1302] gi|315168725|gb|EFU12742.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1341] gi|315170460|gb|EFU14477.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1342] gi|315174924|gb|EFU18941.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1346] gi|315579623|gb|EFU91814.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0630] gi|315580293|gb|EFU92484.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309A] gi|327535959|gb|AEA94793.1| metallo-beta-lactamase [Enterococcus faecalis OG1RF] Length = 260 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|168186952|ref|ZP_02621587.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] gi|169295054|gb|EDS77187.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] Length = 262 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 90/253 (35%), Gaps = 65/253 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS +++++D G + +Q + + ID + TH H DH+ G+ Sbjct: 14 SVYIS-----SGKSSILIDAGLPGKHIEKALQSINKNPNEIDGIFVTHEHIDHVKGVG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ I +YA K + ++ I+ ++ I K A Sbjct: 67 ---VLSRRYNIPIYANELTWKSMNKNIG------------------KIKEENINIISKGA 105 Query: 156 ---GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 I+ H + +G+ V TD+ F E E ++ D +++++ Sbjct: 106 NITIKDIDIFNYSISHDAVDPVGYSVYSGKSKVCVATDLGYFSDEVRENTKDADVVLLES 165 Query: 209 ------LKNGLHS-----------SHFSLSE---SLKKIELINPKNAILTHMHV-----D 243 LK G + H S + ++ + N KN IL H+ D Sbjct: 166 NHDVEMLKFGPYPYSLKRRILSNVGHLSNDDCGKAIVTMTENNCKNIILGHLSKTNNYPD 225 Query: 244 LDYDMVLKSTPSR 256 L Y+ V+ Sbjct: 226 LAYETVVGVLREN 238 >gi|288931070|ref|YP_003435130.1| hypothetical protein Ferp_0684 [Ferroglobus placidus DSM 10642] gi|288893318|gb|ADC64855.1| conserved hypothetical protein [Ferroglobus placidus DSM 10642] Length = 229 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 86/250 (34%), Gaps = 68/250 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G + VP ++ +SSL I + ++VD G Sbjct: 1 MKVTFLGTGVA--VPLA--------------KKAQSSLLIE------DDKLILVDCGFGC 38 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIH---GIDGLRGYFLKQKRPIDVYAA--PDCMKH 117 +++ +DA+L TH H DH GI R L+ ID++A + ++ Sbjct: 39 MLRLEEAGYSPSDLDAILITHFHTDHCGELIGILKARW--LESDEKIDLFAPFAKENLEA 96 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + E++ Y + + D P G ++ +H I + ++ Sbjct: 97 VLEAYPYL------------RTKVKVVTKDKP-----KFGSMKFEVREGKHA-IINYAYK 138 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL-SESLK------KIELI 230 N+ D +FP ++++ I H + +++ +E Sbjct: 139 IENLLISGDTRSFPE----LYEDVEIAI--------HEMSLNFGYKAVDHTTPENFVENA 186 Query: 231 NPKNAILTHM 240 K A HM Sbjct: 187 RVKKAYFVHM 196 >gi|315159614|gb|EFU03631.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0312] Length = 260 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMYFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|171186168|ref|YP_001795087.1| ribonuclease Z [Thermoproteus neutrophilus V24Sta] gi|254808679|sp|B1YAJ2|RNZ_THENV RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|170935380|gb|ACB40641.1| Ribonuclease Z [Thermoproteus neutrophilus V24Sta] Length = 287 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 72/300 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ P++ RT ++ + ++D G Sbjct: 4 LKLVFLGTGGAV----------------PRSDRTLPAIYLE----DWLGHRFLLDAGEGA 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP---------- 112 ++L+ V S+ AV TH H DH G+ GL V A Sbjct: 44 QYRLLQIGVSPASLTAVAITHQHEDHTLGLPGLVITSRFLGGRTAVLAPRSMHKALEALG 103 Query: 113 --------------------DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + F++ D + + + + + Sbjct: 104 VEVMDSYGGDRLRVSCVEVCHTVDACGWLFQWDVGYKLDLSKAAGLPRWALTSLIRGSPV 163 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 + G +I+ + + + R + Y D P K+ +D LI +A Sbjct: 164 EVGGRLIKPEDVAEPGHK------RLRRLLYTGDTAPCPE-MWRKVGEVDVLIHEATFAD 216 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKST--PSRVVP 259 + H +++++++ + +N ILTH+ + + S P V Sbjct: 217 DVEPQKAHEEGHSTVADAVEAAKALNAGVLILTHVSSRYPDKRRHRELAASVKPPPHVYV 276 >gi|213410373|ref|XP_002175956.1| ribonuclease Z [Schizosaccharomyces japonicus yFS275] gi|212004003|gb|EEB09663.1| ribonuclease Z [Schizosaccharomyces japonicus yFS275] Length = 648 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 94/286 (32%), Gaps = 51/286 (17%) Query: 2 KDYYHFTI--LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 + T+ LG G+S C +N +S T ++D Sbjct: 391 TSHSTITLDTLGTGSS------------CAS-IVRN--------VSGYFLSSGKDTFLLD 429 Query: 60 TGPDFYMQVLREQ-------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 G Q+ R+ + + + +H HADH +G+ + L P V Sbjct: 430 CGEGSLSQLSRQYGSNTDVVLSRLKCIFISHSHADHHYGLPSIIQALLSFHLPYKVLLI- 488 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 C + + F ++ + + + + + ++ Sbjct: 489 -CPLDIKNWCNFLFPSIH-----QAIQFATPSTIPKTLETEPSWTWTTVQALHTKNSYSI 542 Query: 173 SLGFR-FGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA------LKNGLHSSHFSLSESL 224 L R G + Y D P SL K+ ++ LI +A + + H + SE+L Sbjct: 543 VLSHRSLGKIVYSGDTR--PNSSLIKVGRDAKLLIHEATLDDSLSQLAVEKRHCTFSEAL 600 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLK----STPSRVVPAFDGMQF 266 + + +N +LTH D V++ P VV A D + Sbjct: 601 LVAKKMKSQNTVLTHFSQRYKSDYVIRKLFPKLPKNVVLACDNLHL 646 >gi|325958847|ref|YP_004290313.1| metal-dependent hydrolase [Methanobacterium sp. AL-21] gi|325330279|gb|ADZ09341.1| metal-dependent hydrolase [Methanobacterium sp. AL-21] Length = 258 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 87/237 (36%), Gaps = 28/237 (11%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK--QKR 104 E + VD GP ++ + + I+ ++ +H H DH + L + ++ Sbjct: 20 EDFEGKNIHVDPGPGALVRTYQFGLSPMKINILMVSHCHTDHYTDAEVLLEAMTRGMTRK 79 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + + + + + + +E+ + + + Sbjct: 80 KGTIVGSTSVINGYER-----WGPCISKYHLSKPEVVTLEHGE-----EHRSDKLRITAT 129 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN--GLHSSHF 218 HG ++GF+ V+Y +D P L+ + +D LI +++ H Sbjct: 130 RTVHGDPKAVGFKISGPDLTVSYTSDTEYTPDLHLDH-KGVDVLIASIIRSGSERIRGHM 188 Query: 219 SLSESLKKIELINPKNAILTHM-------HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 S+ + + I + PK AI+TH+ + + V K T + + A DGM+ Sbjct: 189 SVDDFITLINEVKPKLAIMTHLGMKFIMESPEREAQRVTKETGVKTLAARDGMKIEL 245 >gi|291165780|gb|EFE27828.1| metallo-beta-lactamase family protein YycJ [Filifactor alocis ATCC 35896] Length = 261 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 77/232 (33%), Gaps = 49/232 (21%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T +++D G +L + I + TH H DHI G+ L ++ Sbjct: 18 SDGSTKILIDAGLSGKKIEKNLLEHSQELKDIQGIFVTHEHLDHIKGVG-----ILSRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VYA + + E + N +IE D G I+ Sbjct: 73 DIPVYATEGTWRGMEEGLGNIVEK----------NKKIIEIGD-----SVEVGTIQLDAY 117 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + GF ++ TD+ E ++ LQ + +++++ L+ + Sbjct: 118 SVLHDALEPCGFTITDGRKKISIATDLGYVTEEVIDALQGSELVVLESNYDDELLRYSGY 177 Query: 215 S-----------SHFSLSESLK---KIELINPKNAILTHMHVDLDYDMVLKS 252 H S ++ K + L H+ + ++ M+ + Sbjct: 178 PYALKSRLRSNQGHLSNEDAGKLSVFLVQSGITRIALAHLSKENNHPMLAQQ 229 >gi|307288638|ref|ZP_07568619.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|306500392|gb|EFM69728.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] Length = 260 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDSDLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|328957585|ref|YP_004374971.1| ribonuclease Z [Carnobacterium sp. 17-4] gi|328673909|gb|AEB29955.1| ribonuclease Z [Carnobacterium sp. 17-4] Length = 312 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 63/180 (35%), Gaps = 34/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +R +S+ + + ER NT + D G Sbjct: 1 MELLFLGTGA--GVPA--------------KQRNVTSIALKLLEER--NTIWLFDCGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + +D + TH H DHI G+ G R + P+ +Y + Sbjct: 43 QQQILHTTLKPRKVDKIFITHLHGDHIFGLPGFLSSRSFQGGDG-PLTIYGP----VGIK 97 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + C K P+ E + + + + I +HG I S G+R Sbjct: 98 NYVQVCLKTSGTVLKYPL---HFHEIIEEGVIFEDR--YFKVICRKLKHG-IQSFGYRIE 151 >gi|294673534|ref|YP_003574150.1| metallo-beta-lactamase family protein [Prevotella ruminicola 23] gi|294473510|gb|ADE82899.1| metallo-beta-lactamase family protein [Prevotella ruminicola 23] Length = 270 Score = 66.3 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 80/221 (36%), Gaps = 47/221 (21%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 Q+ S+ +L TH HADHI + L + VYA + + ++ YC Sbjct: 46 QLNSVKRILITHDHADHIKSVGALS-----HDCNLPVYATHKVHQGIDQN--YCVTKKVS 98 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDV 187 + +++ I + G + P H ++G+ TDV Sbjct: 99 QD----------HKHELVIGEQVQLGDFKVRPFAVPHDASENVGYELEVEGIVFVVLTDV 148 Query: 188 NAFPAESLEKLQNLDFLIIDA------LKNGLHSS-----------HFSL---SESLKKI 227 + + + + ++L+I+A LKNG + + H S E+L + Sbjct: 149 GSITDDIKQAINRANYLVIEANHDVEMLKNGPYPAYLQQRILSGSGHLSNVSCGEALVEN 208 Query: 228 ELINPKNAILTHMHVDLDYDMVLKST------PSRVVPAFD 262 K+ L H+ + ++ + + T V+P D Sbjct: 209 MSEGLKHVWLCHLSEENNHPELARKTVETILRSHGVIPGKD 249 >gi|167036568|ref|YP_001664146.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|307267557|ref|ZP_07549034.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|320114996|ref|YP_004185155.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326391557|ref|ZP_08213088.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|166855402|gb|ABY93810.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|306917424|gb|EFN47721.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|319928087|gb|ADV78772.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325992387|gb|EGD50848.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 259 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 29/180 (16%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGI 92 RS + + + ++VD G +L + S+ A+L TH H DHI G Sbjct: 6 LRSGSSGNAIYINHKDVHILVDAGLSGRTIEKALLNIGINPKSLSAILITHEHKDHIIG- 64 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++ I +YA + + + + + ++ Y Sbjct: 65 ----AGVLSRRYNIPIYANKATWEVMEKDIKEI--SEKNKLY-------------FTTGE 105 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G ++ +P + H + +GF F ++ TD+ L D ++++A Sbjct: 106 EFEIGDVKIMPFKKSHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDIVLLEA 165 >gi|229824803|ref|ZP_04450872.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] gi|229790806|gb|EEP26920.1| hypothetical protein GCWU000182_00152 [Abiotrophia defectiva ATCC 49176] Length = 285 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 61/168 (36%), Gaps = 27/168 (16%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +VD G + + S+ + TH HADHI+G+ L +K Sbjct: 28 DSEGNHFLVDCGISCKRIVESLSDFSIDTESVKGIFITHEHADHINGL-----MMLMKKY 82 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+A+ + L + + D +Y ++ IE N P C + Sbjct: 83 KIPVFASLGTLSELTKCRGF------DNSYKKLM--YKIEANR-PFCFN----DFKVNCF 129 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +GF F V+ CTD E + L+ L+I+A Sbjct: 130 NIPHDAAEPMGFNFEKYDTKVSVCTDFGMITDEIEDGLKGSQGLVIEA 177 >gi|257063471|ref|YP_003143143.1| metal-dependent hydrolase, beta-lactamase superfamily I [Slackia heliotrinireducens DSM 20476] gi|256791124|gb|ACV21794.1| metal-dependent hydrolase, beta-lactamase superfamily I [Slackia heliotrinireducens DSM 20476] Length = 266 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 85/249 (34%), Gaps = 52/249 (20%) Query: 52 SNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V++D G + R I VL TH H+DH G+ G L+ R + Sbjct: 23 TGQAVLIDCGISKKAFMSRCTESGFDPARISTVLITHEHSDHTKGL----GVVLRGLRSL 78 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D + + + + R P + + + G + +P Sbjct: 79 DAHPSVYVNRKNLNA---------SRDIPAAIESVDADVAHFEALDSLDIGGMRVVPFAT 129 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H ++S GFRF + + TD ++ + LQ L ++ L+NG + Sbjct: 130 SHDAVASFGFRFEADGDVLGFMTDTGIVTPQAHDCLQGCRILALEGNHDVRMLENGPYPY 189 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-VDLDYD---------MVLKS 252 H S + + + +L+ + + H+ + DY + + Sbjct: 190 VLKQRILGERGHLSNDQGASELADLLHNGLEQVVAMHISQNNNDYAMPRTAFSQMLAQEC 249 Query: 253 TPSRVVPAF 261 P+RV + Sbjct: 250 HPARVQVGY 258 >gi|295098087|emb|CBK87177.1| RNAse Z [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 305 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 99/313 (31%), Gaps = 77/313 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP T +N +++ + + D G Sbjct: 1 MELIFLGT--SAGVP-----------TRSRNV---TAILLDLKHPTRGGL-WLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKHL 118 Q+L +D + TH H DH+ G+ GL + P+ +Y + + Sbjct: 44 QHQLLHTSYHPGKVDKIFITHLHGDHLFGLPGL--LCSRSMAGNANPLTIYGPAGIQEFV 101 Query: 119 FESF-------RYCFKALD-------------DRTYP---PI-VNPIVIENNDVPICMKS 154 + Y + L+ R YP P+ +E +D P + + Sbjct: 102 ETTLRLSGSWTDYPLEVLEIGEGLVFDDGDYLVRAYPLNHPVECYGYRVEEHDKPGALNA 161 Query: 155 AGGV---IEAIPILQ--QHGRISSL--GFRFG------------NVAYCTDVNAFPAESL 195 A ++ P+ Q +HG +L G +A D P +L Sbjct: 162 AALQADGVKPGPLFQRLKHGETVTLEDGRVINGQDYLAPPQPGKKLAIFGDTAPCP-SAL 220 Query: 196 EKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + +D ++ ++A +S H S ++ + + I+TH+ D Sbjct: 221 RLARGVDVMVHEATLEAAMEEKANSRGHSSTRQAAQLAREAGVRKLIVTHVSSRYDVRGA 280 Query: 250 LKSTPS--RVVPA 260 V PA Sbjct: 281 ESLLAECREVFPA 293 >gi|257092986|ref|YP_003166627.1| beta-lactamase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045510|gb|ACV34698.1| beta-lactamase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 255 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 31/168 (18%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD G + L + A+L TH H+DH+ G+ + L ++ Sbjct: 18 DAGETKLLVDCGFSARVATARLARLAAAPEDLTAILVTHEHSDHVAGV-----FALARRH 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY Y A P VI+ + A G +E +P Sbjct: 73 QLTVYLTHGT---------YVAAARGKSALPAC---RVIDGHA-----SFAIGSLEVLPF 115 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + + F N + TD + ++ L D L+++ Sbjct: 116 PVPHDAREPVQYAFNNGQHCLGVLTDTGSITPHIVDMLHACDALVLEC 163 >gi|170723134|ref|YP_001750822.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169761137|gb|ACA74453.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 252 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L Q + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVQASQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + + I G ++ Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGDSLSI-------------GCLQVSAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + Sbjct: 115 EHDAYEPLQYVISDGRRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDMLARGHYPY 174 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + ++ + N ++ +L H+ Sbjct: 175 FLKQRVGGMQGHLNNHQAARLVDELGWSNLQHLVLAHLS 213 >gi|229827327|ref|ZP_04453396.1| hypothetical protein GCWU000182_02715 [Abiotrophia defectiva ATCC 49176] gi|229788265|gb|EEP24379.1| hypothetical protein GCWU000182_02715 [Abiotrophia defectiva ATCC 49176] Length = 304 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 92/320 (28%), Gaps = 89/320 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P R +SL + +V++D G Sbjct: 2 LDICLLGTGGMMPLP----------------NRFLTSLLARY-----NGNSVLIDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 + + ++ V I + TH H DH+ GI GL R P+ + K + Sbjct: 41 QVAIKKKGWSVNPIGLICITHFHGDHVAGIPGLLLSIGNSGRTDPLTILGPKGIEKVVKS 100 Query: 121 S--------FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----------- 161 F F ++ + IE V + G I Sbjct: 101 LCIIAPELPFDVNFVEIEGDGGVFEFLGMKIEAFKVKHNVVCYGYNIVVERAGRFLPDKA 160 Query: 162 --------------------------IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 P + G R V YCTD Sbjct: 161 KENDVPLKCWNRLQKGEVVEFEGKTYTPDMVMGGER-----RGLKVTYCTDTRPVT-VIA 214 Query: 196 EKLQNLDFLIIDALKNGLHSS--------HFSLSESLKKIELINPKNAILTH----MHVD 243 EK + D I + + G H S H ++ E+ + + NP+ LTH M Sbjct: 215 EKAADADLFICEGM-YGDHESDQKAKEKKHMTMYEACELGKKANPRKMWLTHYSPAMAHP 273 Query: 244 LDYDMVLKSTPSRVVPAFDG 263 Y K ++V DG Sbjct: 274 EMYIKEAKEIFNKVKLGKDG 293 >gi|226228101|ref|YP_002762207.1| ribonuclease Z [Gemmatimonas aurantiaca T-27] gi|259494135|sp|C1AAD9|RNZ_GEMAT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|226091292|dbj|BAH39737.1| ribonuclease Z [Gemmatimonas aurantiaca T-27] Length = 314 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 99/329 (30%), Gaps = 97/329 (29%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG AS P R S++ ++R E T++ D G Q+ Sbjct: 7 FLGTAAS----------------RPTVERGVSAISLTREGE-----TLLFDCGEGTQRQM 45 Query: 69 LREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE----- 120 +R V ++ V +TH H+DH+ GI GL Q R P+ ++ K L + Sbjct: 46 MRYGVSFALSDVFFTHVHSDHLLGITGLLRTMALQGRTEPLRLWTPRSTAKTLRQCINIG 105 Query: 121 ----SFR-----------------YCFKALD-DRTYPPIVNPIVIENN-----------D 147 +F Y D + ++E + Sbjct: 106 GERTTFPVEICELEAGSSVKRGEDYRIDTFAVDHRGTASLGYAIVEEERRGRFNPDLARE 165 Query: 148 VPICMKSAGGVIE-AIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEKLQN 200 + I G I PI+ GR+ G + D +L Q+ Sbjct: 166 LGIPEGPLWGRIHRGEPIMLDDGRVIESSVLVGERRRGRRIVITGDTRPC-DGTLAAAQD 224 Query: 201 LDFLIIDALKNGLHSS--------------HFSLSESLKKIELINPKNAILTHMHVDL-- 244 D LI H S H + E+ + + +LTH+ Sbjct: 225 ADLLI--------HESTFADEEGARAQETGHSTAREAAEIALKAGVRRLVLTHISARYSR 276 Query: 245 ---DYDMVLKSTPSRVVPAFDGMQFSSPI 270 D + +S + A DG + + Sbjct: 277 DTRDLEQEARSVFPNTLIARDGTEIELAL 305 >gi|288934267|ref|YP_003438326.1| ribonuclease Z [Klebsiella variicola At-22] gi|288888996|gb|ADC57314.1| ribonuclease Z [Klebsiella variicola At-22] Length = 306 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 68/215 (31%), Gaps = 48/215 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 T LG S GVP RTR +S+ ++ + + D G Sbjct: 1 MELTFLGT--SAGVP----------------TRTRNMTSIILNLQQPTRAEM-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHL 118 Q LR ++ + TH H DH+ G+ GL Q + +Y + + Sbjct: 42 GTQHQFLRTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLPLTLYGPKGLKEFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P+ I + G + A P+ + G+R Sbjct: 102 --------ETALRLSGSWTDYPLTIIEVGPGLVFDEEGYRVTAYPLSHP---VECYGYRI 150 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + P +L+ Q LI D ++ G Sbjct: 151 EQ-------HDKPG-TLDAAQ----LIADGVRPGP 173 >gi|126729611|ref|ZP_01745424.1| pyrroloquinoline quinone biosynthesis protein PqqB [Sagittula stellata E-37] gi|126709730|gb|EBA08783.1| pyrroloquinoline quinone biosynthesis protein PqqB [Sagittula stellata E-37] Length = 298 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 94/305 (30%), Gaps = 54/305 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 + ILG A G+P+ C R+T+SSL ++ + P Sbjct: 3 FRALILGAAAGGGLPQWNCGCENCTLARAGEIPRQTQSSLAVTGNGTDWAILN----ASP 58 Query: 63 DFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D Q+ L + +VL T+ DH+ G+ L++ +P ++A P Sbjct: 59 DIRQQMADAAPLHPTGLRSLPLHSVLVTNGDIDHVAGL-----LTLREMQPFTLFATPVI 113 Query: 115 MKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRI 171 L + F + + R+ + P + + G + + G I Sbjct: 114 QAVLKSNPIFDALHRDVVSRSSIALGVPFELAPGLMAELFPVPGKVPLYLEGERVETGEI 173 Query: 172 S--------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------------- 209 S G R V Y + +L D ++ D Sbjct: 174 GENTVGVALSGGGR--RVCYIPGCAMLNDDLRTRLAGADLVLFDGTLWRDDEMVRAGLGA 231 Query: 210 KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDY-----DMVLKSTPSRVVPAF 261 K G H S+ S+ I+ ++ + HM+ ++ Sbjct: 232 KTGKRMGHMSMSGEDGSIAAFRDIDVRHKVFVHMNNTNPVLRPGSAERAEAQSGGWTIGQ 291 Query: 262 DGMQF 266 DGM+ Sbjct: 292 DGMEI 296 >gi|118443446|ref|YP_879272.1| metallo-beta-lactamase superfamily protein [Clostridium novyi NT] gi|118133902|gb|ABK60946.1| Metallo-beta-lactamase superfamily protein [Clostridium novyi NT] Length = 243 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 32/235 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + + +++D G +V + IDAV+ +H H DH ++ + I Sbjct: 25 QSGDHNILIDCGSGVLSKVQNYLPLSKIDAVILSHYHGDHAA---DIKALQYSAQIDI-- 79 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 ++ + Y + + + + + + G + +H Sbjct: 80 ------KNGTRQNELQIYSHDLSDDYKSLTLEGISKWHKIDDATEIQIGDLNVSFKWGKH 133 Query: 169 GRISSLGFRFGN----VAYCTD---VNAFPAESLEKLQNLDFLIIDA----LKNGLHSSH 217 + SL RF Y D N S ++ D I + G H Sbjct: 134 -PVPSLAMRFEENGKLFVYSGDTEWCNGILDIS----KDADLFICETNFLNKDTGRGKGH 188 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 + E K + N +L+H+ + D + +L ++ A+ G F Sbjct: 189 LTSGEVGKIANMNNVGKLVLSHLPHNTDLNELLNEAKEEFSGQIYKAYSGEVFEL 243 >gi|28211799|ref|NP_782743.1| ribonuclease Z [Clostridium tetani E88] gi|28204241|gb|AAO36680.1| metal dependent hydrolase [Clostridium tetani E88] Length = 327 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 89/308 (28%), Gaps = 107/308 (34%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G + P R +++ +++D G + Sbjct: 19 ITLLGTGGGMPTPE---------------RNLSAAIL------NYKGRKILIDCGEGTQV 57 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA---PDCMKHLF 119 + + +ID + TH H DHI G+ GL +K P+ + + +K L Sbjct: 58 SMKISKTGFKNIDIICITHWHGDHIVGLPGLLATMGNSGRKEPLTIIGPVGIGEIIKGLT 117 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--------SAGGVIEAIPILQQHGRI 171 Y L+ VIE +C S+ G I + +H Sbjct: 118 VIVPYIPYELN-----------VIEATKESLCFTINKENLLLSSKGEIIINTLEVEHSS- 165 Query: 172 SSLGFRFG---------------------------------------------------N 180 + +RF Sbjct: 166 PCIAYRFDVKRKPKFNLEKALDNKVPKVIWNLLQRGGNVEFEGNLYESSMVLGEERKGIK 225 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPK 233 ++ TD P + ++ D LI ++ + + + H + S++ + + K Sbjct: 226 FSFVTDTLPIPEL-IPFVKKSDLLICESNYGQDSDVDKAIKNKHMTFSQAAQIAKSGEVK 284 Query: 234 NAILTHMH 241 ILTH Sbjct: 285 ELILTHFS 292 >gi|41017550|sp|Q892B5|RNZ_CLOTE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 312 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 89/308 (28%), Gaps = 107/308 (34%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G + P R +++ +++D G + Sbjct: 4 ITLLGTGGGMPTPE---------------RNLSAAIL------NYKGRKILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA---PDCMKHLF 119 + + +ID + TH H DHI G+ GL +K P+ + + +K L Sbjct: 43 SMKISKTGFKNIDIICITHWHGDHIVGLPGLLATMGNSGRKEPLTIIGPVGIGEIIKGLT 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--------SAGGVIEAIPILQQHGRI 171 Y L+ VIE +C S+ G I + +H Sbjct: 103 VIVPYIPYELN-----------VIEATKESLCFTINKENLLLSSKGEIIINTLEVEHSS- 150 Query: 172 SSLGFRFG---------------------------------------------------N 180 + +RF Sbjct: 151 PCIAYRFDVKRKPKFNLEKALDNKVPKVIWNLLQRGGNVEFEGNLYESSMVLGEERKGIK 210 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPK 233 ++ TD P + ++ D LI ++ + + + H + S++ + + K Sbjct: 211 FSFVTDTLPIPEL-IPFVKKSDLLICESNYGQDSDVDKAIKNKHMTFSQAAQIAKSGEVK 269 Query: 234 NAILTHMH 241 ILTH Sbjct: 270 ELILTHFS 277 >gi|329930824|ref|ZP_08284223.1| ribonuclease Z [Paenibacillus sp. HGF5] gi|328934526|gb|EGG31031.1| ribonuclease Z [Paenibacillus sp. HGF5] Length = 308 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 77/299 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP + +R +S+ + + ER + + D G Sbjct: 1 MELYFLGTNA--GVPTL--------------QRNVTSIALRMLEER--RSLWLFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA--------- 111 Q+L+ ++ ++ V TH H DH+ G+ GL Q P+ +Y Sbjct: 43 QHQILKSPLKLSKLEKVFITHMHGDHVFGLPGLLSSRGAQGVTSPLTIYGPPGIKVFIET 102 Query: 112 ---------PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------ 156 P M+ + + F+ + ++ + G Sbjct: 103 TLSISQSRVPYTMEVIEHTGGVLFEDDNFLVESAKLDHRAESYGYRVVEKDLPGSLDLKR 162 Query: 157 ---GVIEAIPIL--QQHGRISSLGFRFGNVAYCTDVNAFPAE---------------SLE 196 ++ P+ + G LG G + +DV P + Sbjct: 163 LADYGLKPGPLYGKLKRGESVELGD--GRWIHASDVLLTPKKGRVVTILGDTRPCAGVEA 220 Query: 197 KLQNLDFLIIDA-----LKNGLH-SSHFSLSESLKKIELINPKNAILTHMH---VDLDY 246 ++ D L+ +A L H H + ++ + + K LTH D+D+ Sbjct: 221 LAKDADLLVHEATFMEDLAELAHEYYHSTAKQAAEAAKRAGVKALFLTHFSSRYKDIDH 279 >gi|297559364|ref|YP_003678338.1| hypothetical protein Ndas_0384 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843812|gb|ADH65832.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 250 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 75/251 (29%), Gaps = 50/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+G S D A SS + +++D G Sbjct: 1 MRLTIIGSSGSF----PGPDSPA------------SSYMLEA-----DGYRLLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKH 117 + R + S+DAV +H HADH D + + P I VY Sbjct: 40 LGTLQRHVDIYSVDAVYLSHLHADHC--FDLCSYWVARAYHPGGAKPRIPVYGPGGVA-- 95 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + D + + I G +A H + + G R Sbjct: 96 --RRMAEAYGLEPDPGMTEVFEFHELSPGPFRI------GPFQARVDHVNH-PVEAFGIR 146 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSS--HFSLSESLKKIEL 229 ++AY D ++ + D + +A H H + SE+ + Sbjct: 147 LEHGGASMAYSGDT-GVCDSLVDLAADTDLFLCEAAFQDHLDHPKDMHLTGSEAGEHASR 205 Query: 230 INPKNAILTHM 240 ++ +LTH+ Sbjct: 206 ARARSLLLTHL 216 >gi|170694773|ref|ZP_02885924.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] gi|170140404|gb|EDT08581.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] Length = 257 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 66/215 (30%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L ++DAVL TH H+DHI Sbjct: 14 ALLVEAQSGVTTTRVLLDCGFSAKEVERRLNRLGSSAEALDAVLITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + ++ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADEADVDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GDLSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGTSTPHISTVLSGCDALVLECNHDV 170 Query: 209 -------------LKNGLHSSHFSLSESLKKIELI 230 + G + H + + + + + Sbjct: 171 RMLAGSRYPQSLKARIGGNHGHLNNDAAAEILASL 205 >gi|118594448|ref|ZP_01551795.1| Beta-lactamase-like protein [Methylophilales bacterium HTCC2181] gi|118440226|gb|EAV46853.1| Beta-lactamase-like protein [Methylophilales bacterium HTCC2181] Length = 256 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 73/222 (32%), Gaps = 46/222 (20%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +T++++D G ++ + + I A+L TH H DHI G + L K Sbjct: 18 QDKDTSLLIDCGFGLAETEKRLDNQGIKAEKITAILLTHEHEDHIRG-----AFSLANKF 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y K + + F+ IE + I PI Sbjct: 73 KIPIYLTHGTYKMCSKKIKISFE---------------IEYQFIDGQKPFQIKTIAVTPI 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 + H + F+F + A TD+ + L ++ ++I+A Sbjct: 118 VVPHDAREPVQFKFDTGVTSFAIITDLGYGSKNLIASLIGINSIVIEANHDKEMLVKSEY 177 Query: 209 -----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + G H S E+ K ++ I+ D Sbjct: 178 PESLKSRIGGKYGHLSNQEAAKILKEIDGTRFKFIGAAHLSD 219 >gi|82749799|ref|YP_415540.1| hypothetical protein SAB0022 [Staphylococcus aureus RF122] gi|82655330|emb|CAI79710.1| conserved hypothetical protein [Staphylococcus aureus RF122] Length = 266 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + +++ +L TH H DHI G+ L +K Sbjct: 22 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQNLNGILVTHEHIDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 76 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 181 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|23098628|ref|NP_692094.1| hypothetical protein OB1173 [Oceanobacillus iheyensis HTE831] gi|22776855|dbj|BAC13129.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 244 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 34/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 + + +++D G ++ + V IDAVL +H H DH+ I + Y Sbjct: 25 QSGDFRLLIDIGSGALSKLQKYTDVGQIDAVLLSHYHHDHVADIGVFQYAKLINYYVKGN 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y + + + + + + K G E Sbjct: 85 ENIVPIYGHAEDEEGFAK-----------------LTHTYSKGIEYNPENKLMIGPFEIN 127 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 I H + G R + + Y D + F E E D I D ++G Sbjct: 128 FIQTYH-PVPCYGMRITDGKESIVYTAD-SGFMKEWTEFADRCDLFITDCNYFAGQDGSK 185 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + + + +L+H+ D + K Sbjct: 186 PGHMNSEQVGMIARDAHVNKLLLSHLPQFGDLHQLKKE 223 >gi|308188524|ref|YP_003932655.1| ribonuclease Z [Pantoea vagans C9-1] gi|308059034|gb|ADO11206.1| ribonuclease Z [Pantoea vagans C9-1] Length = 303 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 94/290 (32%), Gaps = 73/290 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H T LG G G P + +R +S+ +R S T + D G Sbjct: 1 MHLTFLGTG--GGAPSL--------------QRNVTSIAFTRAL---SGETWLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------DC 114 +Q +R + +D + TH H DHI G+ GL P+ VY + Sbjct: 42 QLQFMRSSLKPGKLDKIFITHLHGDHIFGLPGLLTSRSMAGLTSPMTVYGPRGLKTFVET 101 Query: 115 MKHLFESF-RYCFKALDDR-----------------TYPPIVNPIVIENNDVPICMKSAG 156 + S+ Y ++ ++P IE +D P + + Sbjct: 102 ALSISGSYTDYPLNIVEIEAGWTLDDGEFRISAWPLSHPVECFGYRIEQHDKPGLLDAER 161 Query: 157 GVIEAIP-------------ILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEK 197 E +P + + GR+ + G +A D +L+ Sbjct: 162 LKAEGVPRGPWFQQLKQGECVTLEDGRVINGADYLGPATPGKKLAIFGDTAP-TEVALQL 220 Query: 198 LQNLDFLI----IDA--LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +D ++ ++A ++ H + ++ + + K I TH Sbjct: 221 AAEVDLMVHETTLEAAMVEKANGRGHSTTLQAAEVAKRAGAKRMIATHFS 270 >gi|18313915|ref|NP_560582.1| hypothetical protein PAE3218 [Pyrobaculum aerophilum str. IM2] gi|41017572|sp|Q8ZTJ7|RNZ_PYRAE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|18161484|gb|AAL64764.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 287 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 91/297 (30%), Gaps = 74/297 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG G ++ PK R ++ + V++D G Sbjct: 5 KLVILGSGGAV----------------PKADRMLPAIYLE----DWLGHRVLLDAGEGVQ 44 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL----- 118 ++L+ + S+ + TH H DHI G+ GL + V A L Sbjct: 45 YRLLQIGISPSSLTLIAVTHMHEDHILGLPGLVITSKFLGGRLKVLAPKSMHGALSKLGV 104 Query: 119 -------FESF----------------------RYCFKALDDRTYPPIVNPIVIENNDVP 149 E F Y P +I+ V Sbjct: 105 EVADSYEEERFKIKCVEVCHTVDACGWLIQWDVGYKLDLSKTSGLPKWALTELIKGKPVK 164 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 I + A P + RF + Y D P +K+ ++D LI +A Sbjct: 165 IGDRIITPEEVADPAHK----------RFKYLLYTGDTAPCPE-MWKKVGSVDVLIHEAT 213 Query: 209 -----LKNGLHS-SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H H +++++++ +N + ILTH+ + SR+ P Sbjct: 214 FADDVSPSKAHEEGHSTVADAIEAARALNAQVLILTHVSARYPDKSRHRELASRISP 270 >gi|326804026|ref|YP_004321844.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650830|gb|AEA01013.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 276 Score = 65.9 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 89/246 (36%), Gaps = 55/246 (22%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G ++ L +++ +DA+ +H H+DH G + ++ + Sbjct: 34 PQRNILVDAGLSGKRIEELLQKIGRDAKDLDAIFISHEHSDHSKG-----AGIMARRYQL 88 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA D +L + C K D+ I++E + + + G ++ + Sbjct: 89 PIYANADTWSYLEQK---CGKLDADQK-------IIMEPGE-----RISFGDVDILSFPV 133 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H I++ + F A TD+ + N D L+I D L+ G + Sbjct: 134 SHDSINAQFYAFQKDGKQFAMMTDLGYVSDRLAGLVYNSDALMIESNYDNDMLRMGKYPW 193 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST------PSR 256 H S E+ + + + K L H+ + + + + T + Sbjct: 194 RLKQRIFSDRGHLSNVETAEALTKMIGERTKRVYLGHISRENNLNALALETNTAILKENG 253 Query: 257 VVPAFD 262 + +D Sbjct: 254 LGVGYD 259 >gi|229056818|ref|ZP_04196218.1| Beta-lactamase domain protein [Bacillus cereus AH603] gi|228720513|gb|EEL72080.1| Beta-lactamase domain protein [Bacillus cereus AH603] Length = 244 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 37/238 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLR------GYFLKQ 102 ++VD G Q+ + S IDAV+ +H H DH+ I L+ Q Sbjct: 25 EHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y + F + + I N G Sbjct: 85 LPELPIY-------------SHSFDENGFNSLTHAPHTKGIAYNPEE---TLQIGPFSIS 128 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 + H ++ R V Y D + P + ++ + I + + Sbjct: 129 FLKTVH-PVTCFAMRITAGDDVVVYSADSSYIPEF-IPFTKDANLFICECNMYAHQEAAK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 H + +E + N K +LTH+ + ++ + A G ++S Sbjct: 187 AGHMNSTEVASIAKTANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS 244 >gi|168183646|ref|ZP_02618310.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237797027|ref|YP_002864579.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182673226|gb|EDT85187.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229262979|gb|ACQ54012.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 261 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 82/238 (34%), Gaps = 55/238 (23%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALNRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + +S + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKS-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGVFSKDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKST 253 H S + + I I KN IL H+ +L Y VL + Sbjct: 177 PYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNAL 234 >gi|289579421|ref|YP_003478048.1| beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289529134|gb|ADD03486.1| beta-lactamase domain protein [Thermoanaerobacter italicus Ab9] Length = 259 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 29/179 (16%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGI 92 RS + + + +++D G + L S+ A+L TH H DHI G Sbjct: 6 LRSGSSGNAIYINHKDVHILIDAGLSGRTIERALLNIGVNPKSLSAILITHEHKDHIKG- 64 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++ I +YA + + + + ++ Y Sbjct: 65 ----AGVLSRRYNIPIYANKATWGAMEKDIKEI--SEKNKLY-------------FTTGE 105 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + G I+ +P + H + +GF F ++ TD+ L D ++++ Sbjct: 106 EFEIGEIKIVPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLE 164 >gi|145423876|gb|ABP68574.1| YycJ [Staphylococcus sciuri] Length = 260 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 69/223 (30%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G Q + + ++ +L TH H DHI G+ L +K Sbjct: 16 ESDKGSLLVDAGLTGKKIEGLFQQIDRNISDLEGILVTHEHIDHIKGLG-----VLARKY 70 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + P+ E + AG IE+ Sbjct: 71 KLPIYANKKTWQMIEA----------KDKNIPLDQKFHFEPYE---TKTLAGMDIES--F 115 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H I + F N + TD + D + +D L+ G + Sbjct: 116 SVSHDAIDPQFYIFNNDYKKLTMITDTGYVSDRMKGMIHGSDAFVFESNHDVDMLRMGKY 175 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + + K L+H+ D Sbjct: 176 PWKTKQRILSDMGHVSNEDAAHAMCDVITGSTKRIYLSHLSQD 218 >gi|304316357|ref|YP_003851502.1| ribonuclease Z [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777859|gb|ADL68418.1| ribonuclease Z [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 303 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 100/322 (31%), Gaps = 89/322 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 + +LG G + +P R SSL + +V+VD G Sbjct: 2 FDMCLLGTGGMMPIP----------------GRYLSSLILRY-----GGISVLVDCGEGT 40 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------------------ 104 +Q L L+IDA+ +TH H DHI G+ G+ + Q R Sbjct: 41 QVPLQKLGWGFLNIDAIFFTHYHGDHIMGLPGIIYQMINQDREKELKLIGPKGMSIISNL 100 Query: 105 ------PID---VY-----------AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 I Y L + CF + PI + Sbjct: 101 LNVLFGDIPFTVEYIEIEDEECMNVGDITVKNILVDHTVLCFAYSFEVKRLPIFDVKKAR 160 Query: 145 NNDVPICM---------KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 ++P+ + G + P + G+ + V+YCTD P ESL Sbjct: 161 ALNIPVEYWHILQHGENITKDGNVIYTPDMVL-GKSR----KGLKVSYCTDTR--PTESL 213 Query: 196 -EKLQNLDFLIIDALKNGLH-------SSHFSLSESLKKIELINPKNAILTHMHVDL--- 244 + +++ D + + + SH + E+ + N K LTH L Sbjct: 214 IDLVKDSDVFVGEGMYGDPLDIEKAIKKSHSTFIETAFVAKEANVKELWLTHFSPSLKNP 273 Query: 245 -DYDMVLKSTPSRVVPAFDGMQ 265 +Y K + D M Sbjct: 274 AEYIKYAKDVFENTIVGHDLMT 295 >gi|52080917|ref|YP_079708.1| ribonuclease Z [Bacillus licheniformis ATCC 14580] gi|52786292|ref|YP_092121.1| ribonuclease Z [Bacillus licheniformis ATCC 14580] gi|319645126|ref|ZP_07999359.1| ribonuclease Z [Bacillus sp. BT1B_CT2] gi|76363374|sp|Q65HN6|RNZ_BACLD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|52004128|gb|AAU24070.1| RNase Z responsible for the maturation of the 3' end of tRNA [Bacillus licheniformis ATCC 14580] gi|52348794|gb|AAU41428.1| YqjK [Bacillus licheniformis ATCC 14580] gi|317392935|gb|EFV73729.1| ribonuclease Z [Bacillus sp. BT1B_CT2] Length = 307 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 91/292 (31%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P R +S+ + + ER + + D G Sbjct: 1 MELLFLGTGA--GIPA--------------KTRNVTSVALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAP------- 112 Q+L + I+ + TH H DH++G+ GL R + + P+ VY Sbjct: 43 QHQILHTSIKPRKIEKIFITHLHGDHVYGLPGLVSSRSFQ-GGEGPLTVYGPQGIKTFLE 101 Query: 113 -------------------------------DCMKHLFESFRYCFKALDDRTYPPIVN-- 139 + + + ++ P ++ Sbjct: 102 TALDVSGTHVTYPLVIKEIGEGTVFEDDQFIVTARSVSHGIPAFGYRVQEKDVPGALDAE 161 Query: 140 -PIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLGFRFGNV-AYCTDVNAFPAESLE 196 I + P+ K G + HG + G + A+ D P E+++ Sbjct: 162 ALKEIGVSPGPVYQKLKNGETVTLEDGRTIHGADFIGPPKKGRIVAFSGDTR--PCENVK 219 Query: 197 KL-QNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 +L + D LI +A H + ++ + K ILTH+ Sbjct: 220 RLAEKADVLIHEATFAKGDRELAGDYYHSTSEQAAETAREACAKKLILTHIS 271 >gi|213028951|ref|ZP_03343398.1| hypothetical protein Salmonelentericaenterica_44895 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 229 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 17/174 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 40 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 99 Query: 107 DVYAAPDCMKHLFES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY P S F + P +++ D+ + ++ Sbjct: 100 QVYGPPGTQAMTKASWKVFDRDITLRMEEEGKPDPR-NLVKATDIGQGVIYKDELVTISA 158 Query: 164 ILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 + H + +RF + + D + FP + Q D L+ +A+ Sbjct: 159 LKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVH 211 >gi|268552381|ref|XP_002634173.1| C. briggsae CBR-HOE-1 protein [Caenorhabditis briggsae] Length = 849 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 105/317 (33%), Gaps = 77/317 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G ++ VP R + + E +++D G Y Sbjct: 504 KLTFFGTSSA--VPS--------------KYRNVTGYLVEGSDES----AILLDVGEGTY 543 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQ----KRPIDVYA 110 Q+ ++ + ++ VL TH H DH++G+ R + RP+ + Sbjct: 544 GQMKAIFGEVGCKKLLTNLHCVLITHAHQDHMNGLYTIVDRRKEAFESLGIPYRPLVLVC 603 Query: 111 APDCMKHLFESFRYCFKAL-------DDRTYP-------------------PIVNPIVIE 144 + +K L ++ CF+ + D +P P + P Sbjct: 604 NRNVLKPLK-TYSICFENIQSLLEIVDISRHPLTPPSSPNGPPGKRPKLPSPHLPPCRDI 662 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP-AESLEKLQ 199 D+P ++ + +Q H + GF + + D P +E+ Q Sbjct: 663 LGDMPSIFDKKKWNLDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK--PCDLLVEEGQ 720 Query: 200 NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 D L+ ++ H + H ++ +++ + +N K+ ILTH VL Sbjct: 721 GADILVHESTFEDGHENDAMRKRHSTMGQAVDVGKRMNAKHIILTHFSARYPKVPVLPQY 780 Query: 254 --PSRVVPAFDGMQFSS 268 + A D ++ Sbjct: 781 LDTDNIGIAMDMLRVRF 797 >gi|300741331|ref|ZP_07071352.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia dentocariosa M567] gi|300380516|gb|EFJ77078.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia dentocariosa M567] Length = 295 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 84/282 (29%), Gaps = 57/282 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S + A S +S G V++D G Sbjct: 1 MRLTIIGCTGSF----PGPNSPA------------SCYLLSATDYAGHTWRVLMDMGNGS 44 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHL 118 + R + IDA+L +H H DH + GL K I +Y ++L Sbjct: 45 LGVLQRYIDLAEIDAILISHLHPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGPAAINEYL 104 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + E + K G P H R Sbjct: 105 SATHG--LDPDPGMS-------TEFEYHTWDEGHKVEIGPFTVEPFRVLHPAKDPYALRI 155 Query: 179 ------GN--VAYCTDVNAFPAESLEKLQNLDFLII---------DALKNGLHSSHFSLS 221 G AY D + ++ + D + DAL+ H + Sbjct: 156 TCNSRDGRTLFAYSGDTDTC-DGLIKAARGADLFLCEAAYQEGRDDALRGI----HLTGK 210 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + + + +N +LTH+ V D D+ S AFDG Sbjct: 211 RAGEAAQEAGVRNLLLTHLPVWNDPDIARAEAQS----AFDG 248 >gi|312199599|ref|YP_004019660.1| hypothetical protein FraEuI1c_5806 [Frankia sp. EuI1c] gi|311230935|gb|ADP83790.1| hypothetical protein FraEuI1c_5806 [Frankia sp. EuI1c] Length = 248 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 42/247 (17%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILGC G G P SS + + ++VD G Sbjct: 1 MKLTILGCSGTYPG-PTSAC----------------SSYLVE-----SDDFRLVVDAGNG 38 Query: 64 FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRP--IDVYAAPDCMKH 117 ++ R + +DAVL +H H DH + ++ Y + Q P + VY + + Sbjct: 39 SLGELQRHCDLRDVDAVLLSHLHGDHCLDLV-VQSYARRYHPQGTPPKLPVYGPINTRER 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + F+ + + I + I V I A P+ RIS+ G Sbjct: 98 ICG----AFERWPEDSLADIYDFQTIGPGRVHIGPFLIDLARVAHPVEAYGVRISADG-- 151 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSS--HFSLSESLKKIELINPK 233 + Y D + + ++ D + +A L + + H + E+ E Sbjct: 152 -KVLTYSGDTGPC-DKLVRLAKDSDLFLCEAAFLDHESNPPDLHLTGREAGLHAEAAGVG 209 Query: 234 NAILTHM 240 +LTH+ Sbjct: 210 QLVLTHL 216 >gi|145423870|gb|ABP68569.1| YycJ [Staphylococcus sciuri] Length = 260 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 69/223 (30%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G Q + + ++ +L TH H DHI G+ L +K Sbjct: 16 ESDKGSLLVDAGLTGKKIEGLFQQIDRNISDLEGILVTHEHIDHIKGLG-----VLARKY 70 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + P+ E + AG IE+ Sbjct: 71 KLPIYANKKTWQMIE----------VKDKNIPLDQKFHFEPYE---TKTLAGMDIES--F 115 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H I + F N + TD + D + +D L+ G + Sbjct: 116 SVSHDAIDPQFYIFNNDYKKLTMITDTGYVSDRMKGMIHGSDAFVFESNHDVDMLRMGRY 175 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + + K L+H+ D Sbjct: 176 PWKTKQRILSDMGHVSNEDAAHAMCDVITGSTKRIYLSHLSQD 218 >gi|123969082|ref|YP_001009940.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. AS9601] gi|166991499|sp|A2BSS2|RNZ_PROMS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123199192|gb|ABM70833.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. AS9601] Length = 312 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 67/178 (37%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNITFLGT--SSGVPSLT---------------RNVSSLALKLSQSAEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I++Y + + Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSEGIEIYGPSELRSFINS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + F L ++P ++ + +EN + + I+ +H +I + G+R Sbjct: 102 ALKSSFCKL---SFP--LHFVEVENFALKNKILFENNKIKVNCACLKH-KIPAYGYRV 153 >gi|309365608|emb|CAP22894.2| CBR-HOE-1 protein [Caenorhabditis briggsae AF16] Length = 832 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 105/317 (33%), Gaps = 77/317 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G ++ VP R + + E +++D G Y Sbjct: 487 KLTFFGTSSA--VPS--------------KYRNVTGYLVEGSDES----AILLDVGEGTY 526 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQ----KRPIDVYA 110 Q+ ++ + ++ VL TH H DH++G+ R + RP+ + Sbjct: 527 GQMKAIFGEVGCKKLLTNLHCVLITHAHQDHMNGLYTIVDRRKEAFESLGIPYRPLVLVC 586 Query: 111 APDCMKHLFESFRYCFKAL-------DDRTYP-------------------PIVNPIVIE 144 + +K L ++ CF+ + D +P P + P Sbjct: 587 NRNVLKPLK-TYSICFENIQSLLEIVDISRHPLTPPSSPNGPPGKRPKLPSPHLPPCRDI 645 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP-AESLEKLQ 199 D+P ++ + +Q H + GF + + D P +E+ Q Sbjct: 646 LGDMPSIFDKKKWNLDELKAVQVHHTRMANGFVMRVAGKRIVFSGDTK--PCDLLVEEGQ 703 Query: 200 NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 D L+ ++ H + H ++ +++ + +N K+ ILTH VL Sbjct: 704 GADILVHESTFEDGHENDAMRKRHSTMGQAVDVGKRMNAKHIILTHFSARYPKVPVLPQY 763 Query: 254 --PSRVVPAFDGMQFSS 268 + A D ++ Sbjct: 764 LDTDNIGIAMDMLRVRF 780 >gi|291563490|emb|CBL42306.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [butyrate-producing bacterium SS3/4] Length = 265 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 27/160 (16%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G Q L E + +D + TH H+DH+ G+ L +K + Sbjct: 20 EESHILIDAGISAKRIEQGLNEVGLKTSELDGICITHEHSDHVKGLG-----VLARKYEV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + ++ +P + + + A G + P Sbjct: 75 PIYATEGTLNEIKN-IKGLGEYPEELLHPILPDT------------EFALGDLTVKPFHI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLD 202 H + +R +VA TD+ F +++ L +LD Sbjct: 122 DHDAADPVAYRIQSGNKSVAVATDLGHFNQYTVDHLLDLD 161 >gi|261406217|ref|YP_003242458.1| ribonuclease Z [Paenibacillus sp. Y412MC10] gi|261282680|gb|ACX64651.1| ribonuclease Z [Paenibacillus sp. Y412MC10] Length = 309 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 77/299 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP + +R +S+ + + ER + + D G Sbjct: 1 MELYFLGTNA--GVPTL--------------QRNVTSIALRMLEER--RSLWLFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA--------- 111 Q+L+ ++ ++ V TH H DH+ G+ GL Q P+ +Y Sbjct: 43 QHQILKSPLKLSKLEKVFITHMHGDHVFGLPGLLSSRGAQGVTSPLTIYGPPGIKVFIET 102 Query: 112 ---------PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------ 156 P M+ + + F+ + ++ + G Sbjct: 103 TLSISQSRVPYTMEVIEHTGGVLFEDDNFLVESAKLDHRAESYGYRVVEKDLPGSLDLKR 162 Query: 157 ---GVIEAIPIL--QQHGRISSLGFRFGNVAYCTDVNAFPAE---------------SLE 196 ++ P+ + G LG G + +DV P + Sbjct: 163 LADYGLKPGPLYGKLKRGESVELGD--GRWIHASDVLLTPKKGRVVTILGDTRPCAGVEA 220 Query: 197 KLQNLDFLIIDA-----LKNGLH-SSHFSLSESLKKIELINPKNAILTHMH---VDLDY 246 ++ D L+ +A L H H + ++ + + K LTH D+D+ Sbjct: 221 LAKDADLLVHEATFMEDLSELAHEYYHSTAKQAAEAAKRAGVKALFLTHFSSRYKDIDH 279 >gi|297545562|ref|YP_003677864.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843337|gb|ADH61853.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 259 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 29/179 (16%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGI 92 RS + + + +++D G + L S+ A+L TH H DHI G Sbjct: 6 LRSGSSGNAIYINHKDVHILIDAGLSGRTIERALLNIGVNPKSLSAILITHEHKDHIKG- 64 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++ I +YA + + + + ++ Y Sbjct: 65 ----AGVLSRRYNIPIYANKATWGAMEKDIKEI--SEKNKLY-------------FTTGE 105 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + G I+ IP + H + +GF F ++ TD+ L D ++++ Sbjct: 106 EFEIGEIKIIPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLE 164 >gi|153003658|ref|YP_001377983.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027231|gb|ABS24999.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 280 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 22/204 (10%) Query: 52 SNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T+ VD GP ++ L R +DA+L TH H DH + + Sbjct: 35 GGATLWVDPGPGALVRALASRPRVDPAKVDALLVTHRHLDHAGDATAVVEAMSRGG---- 90 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +A + ++ + Y + ++ + G V+E P+ Sbjct: 91 -FAPRGTLLAPSDALD---EEPVVFRYAQGFVARRLVLSEGSRHELAPGVVVE-TPLAHD 145 Query: 168 HGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIIDALKNG---LHSSHFSL 220 HG I + G+R + D A +D L+++ + H Sbjct: 146 HG-IETYGYRLHAPGFTAGHVVDTFWMDALPRAY-AGVDLLVVNTTRERGRDRRYLHLGA 203 Query: 221 SESLKKIELINPKNAILTHMHVDL 244 ++ + I P+ A+LTH+ + L Sbjct: 204 DDAETLVAEIRPRLAVLTHLGMQL 227 >gi|313884203|ref|ZP_07817969.1| ribonuclease Z [Eremococcus coleocola ACS-139-V-Col8] gi|312620650|gb|EFR32073.1| ribonuclease Z [Eremococcus coleocola ACS-139-V-Col8] Length = 311 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 60/179 (33%), Gaps = 31/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P KN R SS+ + +++ N + D G Sbjct: 1 MELLFLGTGA--GIP-------------SKN-RNVSSMALKLLNQ--LNQVWLFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + + + TH H DHI G+ G Q P+ +Y ++ Sbjct: 43 QHQILHTSLKPRKVSKIFITHMHGDHIFGLPGFLSSRSFQGGEEPVTIYGPQGIKDYVL- 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 C K P+ + E G +A + HG I S GFR Sbjct: 102 ---MCLKLSKSNLGYPL----IFEELSDQGGKLDLGHGWQAEYLPLNHG-ILSFGFRIK 152 >gi|163790596|ref|ZP_02185025.1| hypothetical protein CAT7_08445 [Carnobacterium sp. AT7] gi|159874199|gb|EDP68274.1| hypothetical protein CAT7_08445 [Carnobacterium sp. AT7] Length = 248 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 38/220 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------ 104 N +++D G + + L +DAV+ +H H DHI + + + + KR Sbjct: 27 ENYHLLIDAGSASLIALENHLDPLELDAVILSHYHYDHIADLG-VLQFTRQLKRMKNNLE 85 Query: 105 ---PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y DD + + +V E K G E Sbjct: 86 RASMLPIYGHQ----------------GDDENFKRLTMDLVSEGIAYQEQQKITIGPFEI 129 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKN--G 212 + H + + + Y D P + ++ D L+ D L N Sbjct: 130 QFMKTLH-PVECYAMKIVEMKTGKTLVYTADSGYLPEF-IPFSKDADILLADTNLFNGME 187 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H H + SE + + K ILTH+ D +++ Sbjct: 188 NHRVHMAASEVGRIAKAAEVKKVILTHLPQVGDLELLKAQ 227 >gi|283469251|emb|CAQ48462.1| YycJ protein [Staphylococcus aureus subsp. aureus ST398] Length = 260 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIKDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|26987974|ref|NP_743399.1| beta-lactamase domain protein [Pseudomonas putida KT2440] gi|24982688|gb|AAN66863.1|AE016314_10 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 252 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSAAQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + I G +E Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGQSLHI-------------GSLEVTAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDLLARGHYPA 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + + N ++ +L H+ Sbjct: 175 FLKQRVGGMQGHLNNHQAARLVHELGWNNLQHLVLAHLS 213 >gi|327470649|gb|EGF16105.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK330] Length = 266 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 92/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|284029806|ref|YP_003379737.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283809099|gb|ADB30938.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 248 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 88/281 (31%), Gaps = 60/281 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S VP D A S +++D G Sbjct: 1 MKLTVLGC--SGSVP--GPDSPA-----------------SGYLVTADGFHLVLDLGSGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-------RPIDVYAAPDCMK 116 + R V I A+ +H H DH L G ++ K I V+ Sbjct: 40 LGALQRHIAVPQIGAIGLSHLHPDHCM---DLCGLYVAAKYSPAAPFPRIPVFGPSGTAA 96 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDV--PICMKSAGGVIEAIP---ILQQHGRI 171 + DD ++ + P +++A + +P I +HG Sbjct: 97 ----RMALAYDLPDDPGMEEELDFRSWQEIQQIGPFTVRTAPM-VHPVPAYAIRVEHGN- 150 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKK 226 ++ Y D +E + D L+ +A H + +++ + Sbjct: 151 -------KSLTYTGDT-GPNEALVELARGTDLLLSEAALQDNDPRNPPDLHLTPADAGEH 202 Query: 227 IELINPKNAILTHM----HVDLDYDMVLKSTPSRVVPAFDG 263 + K ++TH+ D+ D ++ P V AF G Sbjct: 203 AKRAGAKRLVITHVPPWYDRDVQTDHARRTYPGEVHTAFPG 243 >gi|163840217|ref|YP_001624622.1| beta-lactamase superfamily hydrolase [Renibacterium salmoninarum ATCC 33209] gi|162953693|gb|ABY23208.1| metal-dependent hydrolases of the beta-lactamase superfamily III [Renibacterium salmoninarum ATCC 33209] Length = 265 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 74/265 (27%), Gaps = 61/265 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P+ + +S + + +++D G Sbjct: 1 MKLTIVGCSGSFPGPQ-----------------SPASCYLLTAHDGIRPWRILLDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHL 118 V + + ID + +H H DH + GL I V+ L Sbjct: 44 LGAVQKYMDLRDIDGIFLSHLHPDHCMDLCGLHVAVRWDPDGWDAGRIPVWGPAATADRL 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-----MKSAGGVIEAIPILQQHGRISS 173 ++ ++P + + G P H + Sbjct: 104 ATAYG--------------LDPEPGMREEFDFITWSERTAVSLGPFTITPYAVDHPMEEA 149 Query: 174 LGFRFG-------------NVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSS--- 216 R +AY D + P +E Q F + + A + G + Sbjct: 150 YALRVEVSEFDGTGVDRRVVLAYSGDTDTCPGL-IEAAQGAHFFLCEAAFQEGRDDAIKG 208 Query: 217 -HFSLSESLKKIELINPKNAILTHM 240 H + + + + +LTH+ Sbjct: 209 VHLTGKRAAEAATEAGVRRLLLTHL 233 >gi|319650137|ref|ZP_08004286.1| YhfI protein [Bacillus sp. 2_A_57_CT2] gi|317398318|gb|EFV79007.1| YhfI protein [Bacillus sp. 2_A_57_CT2] Length = 244 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 33/218 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL------RGYFLKQ 102 +++D G ++ Q +DAV+ +H H DHI I L + + ++ Sbjct: 25 EHDGFHLLIDCGSGVLSKMQNFFQPEELDAVIISHYHPDHIADIGVLQHARLIQSFLGRK 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y +LD + + + G + Sbjct: 85 TDTLPIYG----------------HSLDQYEFAKFTYKDITKGVCYDPDGTLFAGPFQIR 128 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLH 214 + H + R + Y D + + E +N D L+ + +NG + Sbjct: 129 FLKTNH-PVPCYAMRIEADGKTLIYTADTS-YKEELAAFSENADLLVCECNFYGHQNGKN 186 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + ++ KN +LTH+ + + + Sbjct: 187 AGHMTSLDAGTLASKAKVKNLLLTHLPHYGELRKLKEE 224 >gi|169335502|ref|ZP_02862695.1| hypothetical protein ANASTE_01916 [Anaerofustis stercorihominis DSM 17244] gi|169258240|gb|EDS72206.1| hypothetical protein ANASTE_01916 [Anaerofustis stercorihominis DSM 17244] Length = 262 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 40/193 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL + NT ++VD G ++ + ++ IDA+L TH H+DHI G Sbjct: 14 SLLVE-----SENTKILVDAGLPGSTIVNELKKIDVEISDIDAILITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ I +Y + + + ++ Y IE ++P + Sbjct: 65 -AGVLSRRADIPIYLHRAACDTVLKKVG---RVKEENIYR-------IEE-EIPFYIN-- 110 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 + H ++ +GF + TD+ + +E L+ F+ ++A Sbjct: 111 --DVLVNSFSIPHDAVAPIGFTIDDGKTKCGVATDMGMIMEDVIENLKECKFVFLEANHD 168 Query: 209 ---LKNGLHSSHF 218 LK G + H Sbjct: 169 ENMLKKGSYPIHL 181 >gi|323440403|gb|EGA98116.1| metallo-beta-lactamase family protein [Staphylococcus aureus O11] gi|323443117|gb|EGB00736.1| metallo-beta-lactamase family protein [Staphylococcus aureus O46] Length = 260 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPTDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|302670969|ref|YP_003830929.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302395442|gb|ADL34347.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 265 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 47/221 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT +++D G Q L E + +DA+ TH H DHI + + +K I Sbjct: 20 DNTHILIDAGVSKKRIEQGLNELELSLSDLDAIFVTHEHVDHIAALH-----TILKKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA ++ + S D+ + + D + + G + P+ Sbjct: 75 PIYATNGTIEGIRNS---------DKKGEMTDSRFITVCADKMVTV----GDMMINPMTI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H G+R + TD+ + +++ L++ D L+++A L+ G + Sbjct: 122 SHDANEPCGYRVFCGDKKIGVATDLGCYTDYTVDCLRDCDALLLEANHDIRMLQTGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S +S + + + K L H+ + Sbjct: 182 QLKRRILGDTGHLSNEKSGELLCKLLNDKIKGIFLGHLSKE 222 >gi|254492367|ref|ZP_05105539.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxidans DMS010] gi|224462259|gb|EEF78536.1| metallo-beta-lactamase superfamily protein [Methylophaga thiooxydans DMS010] Length = 231 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 57/177 (32%), Gaps = 39/177 (22%) Query: 57 IVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++D G Q+L S+ A+L TH HADH+ G+ + +K + VY Sbjct: 1 MIDCGFSAREAVKRLQLLNIDPASLSAILITHEHADHMAGVR-----VMARKFNLPVYTT 55 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P L D Y N K IE P H Sbjct: 56 PGTAGCL---------PEDVAPYIHAFNCHE----------KFVIDDIEVEPFPVPHDAR 96 Query: 172 SSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF 218 F F + V TDV + L D L+++A L+ G + H Sbjct: 97 EPSQFVFSDGALRVGLLTDVGSITPLIENTLSACDALLLEANHDLTMLEQGEYPEHL 153 >gi|253733817|ref|ZP_04867982.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|297209430|ref|ZP_06925828.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297589179|ref|ZP_06947820.1| beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|300911454|ref|ZP_07128903.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|304379970|ref|ZP_07362699.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|253728120|gb|EES96849.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH130] gi|269939548|emb|CBI47906.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus TW20] gi|296885891|gb|EFH24826.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297577690|gb|EFH96403.1| beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|300887633|gb|EFK82829.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|302749933|gb|ADL64110.1| metallo-beta-lactamase hydrolase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341550|gb|EFM07460.1| beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436837|gb|ADQ75908.1| beta-lactamase [Staphylococcus aureus subsp. aureus TCH60] gi|312828585|emb|CBX33427.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|329312746|gb|AEB87159.1| Beta-lactamase domain protein [Staphylococcus aureus subsp. aureus T0131] Length = 260 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|297527193|ref|YP_003669217.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] gi|297256109|gb|ADI32318.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] Length = 251 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 49/248 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA++ P +R R + ++D G ++ Sbjct: 7 MLGTGAAM----------------PISRGLPCIAL------RIDSNIYLLDVGEGCQQRL 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-APDCMKHLFESFRYC 125 + I ++ TH H DH G+ G+ R ++Y AP +K L + F Sbjct: 45 FEAGLGLVKIKTIMITHLHGDHYLGLFGMFQSMHLSNRKNELYLIAPAKLKDLLKKFIEL 104 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GN 180 L YP +E + + I HG I + G++ Sbjct: 105 --GLAKIAYP----IYFVEAKEGELYRD---NKISVEAFKVVHG-IEAYGYKLTLKNGKR 154 Query: 181 VAYCTDVNAFPA-ESLEKLQNLDFLIIDA-----LKNGL-HSSHFSLSESLKKIELINPK 233 + Y D F ES+ +N D L+ +A L+ H + +++ N K Sbjct: 155 IVYTGDTKPFEDLESIA--KNADILVHEATFTSDLREEAWEQGHSTAADAAITAYKANVK 212 Query: 234 NAILTHMH 241 +LTH+ Sbjct: 213 ELVLTHIS 220 >gi|167040927|ref|YP_001663912.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|300913864|ref|ZP_07131181.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307725452|ref|YP_003905203.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] gi|166855167|gb|ABY93576.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|300890549|gb|EFK85694.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307582513|gb|ADN55912.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] Length = 259 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 29/180 (16%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGI 92 RS + + + +++D G + V S+ A+L TH H DHI G Sbjct: 6 LRSGSSGNAIYINHKDVHILIDAGLSGRTIEKALFNIGVTPKSLSAILITHEHKDHIIG- 64 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L ++ I +YA + + + + + ++ Y Sbjct: 65 ----AGVLSRRYNIPIYANKATWEVMEKDIKEI--SEKNKLY-------------FTTGE 105 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G ++ +P + H + +GF F ++ TD+ L D ++++A Sbjct: 106 EFEIGDVKIMPFKKPHDAVEPVGFSFKCGDKKISIATDLGYMTRGVANHLIGSDVVLLEA 165 >gi|170760795|ref|YP_001788906.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407784|gb|ACA56195.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 261 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 83/238 (34%), Gaps = 55/238 (23%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALNRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + + ++ + IE D + +E P Sbjct: 73 DIPIYANAKTWQAMKKN-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGIFSKDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKST 253 H S + + I I KN IL H+ +L Y VL + Sbjct: 177 PYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNAL 234 >gi|195383628|ref|XP_002050528.1| GJ20155 [Drosophila virilis] gi|194145325|gb|EDW61721.1| GJ20155 [Drosophila virilis] Length = 758 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 97/307 (31%), Gaps = 85/307 (27%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I +E +++D G + Sbjct: 449 RIIFLGTGS-------------CIPNKTRNV---SSILIQTAAE----AFMLLDCGEGTH 488 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHG------------------------ID 93 Q++R + + + AV +H HADH G I+ Sbjct: 489 GQIVRLYGRERARQVMQQLQAVYVSHLHADHHIGLIGLLRERQRLAPASPLLLLAPRQIE 548 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 ++ +Q I A + E + + I V C Sbjct: 549 PWLQFYNRQIESI---ADAYTLVGNGE----LLEQPLAGEQVDQLGIASIATCLVRHCPH 601 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG 212 + G + + QH V Y D P L +L +N LI +A Sbjct: 602 AFGVSLT---LQAQHEGAPI------KVTYSGDT--MPCADLVELGRNSTVLIHEATMED 650 Query: 213 ------LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAF 261 +H ++S+++++ + K+ ILTH Y PS V AF Sbjct: 651 DLEEEARIKTHSTISQAIQQGRDMEAKHIILTHFSQR--YAK-CPRLPSSEDMQHVAIAF 707 Query: 262 DGMQFSS 268 D MQ + Sbjct: 708 DNMQVTV 714 >gi|301066781|ref|YP_003788804.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus casei str. Zhang] gi|300439188|gb|ADK18954.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus casei str. Zhang] Length = 245 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 35/212 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DHI + L+ Y+ +K Sbjct: 25 ESGDYHLLMDLGSGGLLSLEQQFDPLKLDAVLLTHYHHDHIADVGVLQYYYQLRKGDKKV 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F + Y + G + Sbjct: 85 SPLPIYGHTKDPLNFASLTFG---PYTTAKGYTADSTLHL--------------GPLTLT 127 Query: 163 PILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH 214 + QH + + R + +D FPA + ++ D L+ D L + Sbjct: 128 FLETQH-PVPAFAVRIVEDVTGKTLVNTSDTRYFPALA-PFSKDADLLMADTNFLADQPQ 185 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLD 245 H + E+ K + K +LTH+ LD Sbjct: 186 PRWHLTAPEAGKLAKDAQVKRLLLTHLPQQLD 217 >gi|260598692|ref|YP_003211263.1| ribonuclease Z [Cronobacter turicensis z3032] gi|260217869|emb|CBA32408.1| Ribonuclease Z [Cronobacter turicensis z3032] Length = 324 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 87/322 (27%), Gaps = 96/322 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S G+P TR+ I + + + D G Sbjct: 21 MELTFLGT--SAGLPST----------------TRNVTAIVLNPQNNQSGLWLFDCGEAT 62 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR I+ + TH H DHI G+ GL P++VY + + Sbjct: 63 QHQMLRASANPGKIEKIFITHLHGDHIFGLPGLLCSRSMAGCETPLEVYGPKGIAEFIET 122 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 + R + +YP + +++ + H + G+R Sbjct: 123 TLR---LSGSWTSYP-------LSVHEITEGQLFDDSELTVTAFPLTH-PVECYGYRIEE 171 Query: 180 -------NVA----------------------------------YCT------------D 186 + A Y + D Sbjct: 172 HDKPGALDAARLKAAGVAPGPLFQQLKRGETVTLDDGRTLCGADYLSAPRPGKKIAIFGD 231 Query: 187 VNAFPAESLEKLQNLDFLI----IDALKNGL--HSSHFSLSESLKKIELINPKNAILTHM 240 P + +++D ++ ++A H + ++ + K ++TH Sbjct: 232 TAPTPQA-VALARDVDVMVHETTLEAAMAEKANGRGHSTTQQAATVAKDAGAKRLVMTHF 290 Query: 241 HVDLDYDMVLKSTPS--RVVPA 260 + + V PA Sbjct: 291 SSRYGAEDCQRLLAECQAVFPA 312 >gi|15923012|ref|NP_370546.1| hypothetical protein SAV0022 [Staphylococcus aureus subsp. aureus Mu50] gi|15925727|ref|NP_373260.1| hypothetical protein SA0021 [Staphylococcus aureus subsp. aureus N315] gi|21281751|ref|NP_644837.1| hypothetical protein MW0022 [Staphylococcus aureus subsp. aureus MW2] gi|49482275|ref|YP_039499.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49484934|ref|YP_042155.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|148266469|ref|YP_001245412.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150392502|ref|YP_001315177.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|156978353|ref|YP_001440612.1| hypothetical protein SAHV_0022 [Staphylococcus aureus subsp. aureus Mu3] gi|221141407|ref|ZP_03565900.1| hypothetical protein SauraJ_07183 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316860|ref|ZP_04840073.1| hypothetical protein SauraC_12085 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|254663956|ref|ZP_05143428.1| hypothetical protein SauraM_00110 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257424218|ref|ZP_05600647.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257426895|ref|ZP_05603297.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429531|ref|ZP_05605918.1| YycJ protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432178|ref|ZP_05608541.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257435139|ref|ZP_05611190.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|257793560|ref|ZP_05642539.1| beta-lactamase [Staphylococcus aureus A9781] gi|258411134|ref|ZP_05681413.1| beta-lactamase [Staphylococcus aureus A9763] gi|258420962|ref|ZP_05683896.1| metallo-beta-lactamase [Staphylococcus aureus A9719] gi|258423216|ref|ZP_05686108.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] gi|258438601|ref|ZP_05689824.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|258443943|ref|ZP_05692281.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|258446241|ref|ZP_05694401.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|258449100|ref|ZP_05697206.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6224] gi|258454422|ref|ZP_05702390.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] gi|269201712|ref|YP_003280981.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED98] gi|282894301|ref|ZP_06302531.1| ribonuclease Z [Staphylococcus aureus A8117] gi|282902653|ref|ZP_06310546.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus C160] gi|282907069|ref|ZP_06314917.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282910048|ref|ZP_06317856.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912296|ref|ZP_06320092.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282912936|ref|ZP_06320728.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M899] gi|282918090|ref|ZP_06325840.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282921312|ref|ZP_06329030.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282922564|ref|ZP_06330254.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|282927772|ref|ZP_06335386.1| ribonuclease Z [Staphylococcus aureus A10102] gi|283767812|ref|ZP_06340727.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283959506|ref|ZP_06376947.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus A017934/97] gi|293497989|ref|ZP_06665843.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|293511579|ref|ZP_06670273.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus M809] gi|293550188|ref|ZP_06672860.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M1015] gi|295406886|ref|ZP_06816690.1| ribonuclease Z [Staphylococcus aureus A8819] gi|295429319|ref|ZP_06821941.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276714|ref|ZP_06859221.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus MR1] gi|297245921|ref|ZP_06929783.1| ribonuclease Z [Staphylococcus aureus A8796] gi|13699939|dbj|BAB41238.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14245789|dbj|BAB56184.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|21203186|dbj|BAB93887.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49240404|emb|CAG39050.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49243377|emb|CAG41794.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|147739538|gb|ABQ47836.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149944954|gb|ABR50890.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|156720488|dbj|BAF76905.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257273236|gb|EEV05338.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276526|gb|EEV07977.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257280012|gb|EEV10599.1| YycJ protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283057|gb|EEV13189.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus E1410] gi|257285735|gb|EEV15851.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus M876] gi|257787532|gb|EEV25872.1| beta-lactamase [Staphylococcus aureus A9781] gi|257840019|gb|EEV64484.1| beta-lactamase [Staphylococcus aureus A9763] gi|257843152|gb|EEV67567.1| metallo-beta-lactamase [Staphylococcus aureus A9719] gi|257846545|gb|EEV70567.1| beta-lactamase domain-containing protein [Staphylococcus aureus A9635] gi|257848160|gb|EEV72152.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|257850827|gb|EEV74771.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8115] gi|257855067|gb|EEV78010.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6300] gi|257857533|gb|EEV80428.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A6224] gi|257863516|gb|EEV86276.1| beta-lactamase domain-containing protein [Staphylococcus aureus A5937] gi|262074002|gb|ACY09975.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED98] gi|282314785|gb|EFB45171.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|282315727|gb|EFB46111.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282318375|gb|EFB48735.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282323036|gb|EFB53355.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M899] gi|282323992|gb|EFB54308.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326114|gb|EFB56419.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329968|gb|EFB59489.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282590532|gb|EFB95610.1| ribonuclease Z [Staphylococcus aureus A10102] gi|282597112|gb|EFC02071.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus C160] gi|282763346|gb|EFC03476.1| ribonuclease Z [Staphylococcus aureus A8117] gi|283461691|gb|EFC08775.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283789098|gb|EFC27925.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus A017934/97] gi|285815749|gb|ADC36236.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus 04-02981] gi|290919235|gb|EFD96311.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus M1015] gi|291096920|gb|EFE27178.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|291465537|gb|EFF08069.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus aureus subsp. aureus M809] gi|294968351|gb|EFG44376.1| ribonuclease Z [Staphylococcus aureus A8819] gi|295127078|gb|EFG56722.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|297177286|gb|EFH36539.1| ribonuclease Z [Staphylococcus aureus A8796] gi|298693344|gb|ADI96566.1| metallo-beta-lactamase family protein YycJ [Staphylococcus aureus subsp. aureus ED133] gi|315129565|gb|EFT85557.1| hypothetical protein CGSSa03_11301 [Staphylococcus aureus subsp. aureus CGS03] gi|315195248|gb|EFU25636.1| hypothetical protein CGSSa00_04272 [Staphylococcus aureus subsp. aureus CGS00] gi|329725920|gb|EGG62399.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 266 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 22 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 76 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 181 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|253730422|ref|ZP_04864587.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725902|gb|EES94631.1| beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 260 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H DHI G+ L +K Sbjct: 16 ENEKGSLLVDVGLTGKKMEELFSQIDR-NIQDLNGILVTHEHIDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + + P+ + + AG +E+ Sbjct: 70 YQLPIYANEKTWQAIEK----------KDSRIPMDQKFIFNPYE---TKSIAGFDVES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD ++ D I +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|229828894|ref|ZP_04454963.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] gi|229792057|gb|EEP28171.1| hypothetical protein GCWU000342_00979 [Shuttleworthia satelles DSM 14600] Length = 245 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 46/207 (22%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +DA+L TH H+DHI G+ L +K + +YA + + +D Y Sbjct: 24 DMDAILLTHEHSDHISGLG-----VLARKYHLPIYATQGTIDAVATKRS--LGTIDPSLY 76 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--------GNVAYCTD 186 VI + G +E P+ H + + VA CTD Sbjct: 77 ------HVIRPDQ-----TFTIGDMEICPMHISHDAADPVAYTMRQRTEDGDKRVAVCTD 125 Query: 187 VNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIEL 229 + A+ ++E+LQ +D ++++A L+ G + H S S + + Sbjct: 126 LGAYDDYTIERLQGMDAMLLEANHDVKMLEVGPYPYPLKQRILGSRGHLSNESSGQLLGR 185 Query: 230 I---NPKNAILTHMHVDLDYDMVLKST 253 + K+ +L H+ + + + + T Sbjct: 186 LLHDKIKHILLGHLSHENNLEELAYET 212 >gi|194017036|ref|ZP_03055649.1| ribonuclease Z [Bacillus pumilus ATCC 7061] gi|194011642|gb|EDW21211.1| ribonuclease Z [Bacillus pumilus ATCC 7061] Length = 309 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 83/312 (26%), Gaps = 92/312 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P K R + + D G Sbjct: 1 MELLFLGTGA--GIP-------------AKTRNVTCTAL---KLLEERKAVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DH++G+ GL G Q + +Y + Sbjct: 43 QHQILHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTIYGPKGIKAFVSA 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + TYP +IE ++ + + HG I + G+R Sbjct: 103 ALS---ATQTHLTYP----LHIIEIDE---GIVFEDDTFQVEARRVSHG-IPAYGYRVVE 151 Query: 179 ------------------------------------GNVAYCTDVNAFP----------- 191 G + TD P Sbjct: 152 KDVPGALKAEDLKEIGVKPGPLYQKLKNGETVTLEDGRIIDGTDYLEPPKKGRIVAFSGD 211 Query: 192 ----AESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 ++ D L+ +A + H + ++ K + K ILTH+ Sbjct: 212 TRLCENITRLAKDADVLVHEATFGKEDADLAYNYYHSTTEQAAKTAQEAGAKRLILTHIS 271 Query: 242 VDLDYDMVLKST 253 + LK Sbjct: 272 ARYQGEEALKQL 283 >gi|68163286|dbj|BAE02675.1| hypothetical protein [Hydrogenobacter thermophilus] Length = 202 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 36/217 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFESFRYCF 126 + ++D ++ +H H DH ++ L + + ++A + Sbjct: 1 MDFDPRNLDLIVLSHIHLDHSADVNSLIESATDGGKRHHVALFAPRSAFEG--------- 51 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRISSLGFRF-GNVAYC 184 +D+ P + + + I+ +++ H + F G + Y Sbjct: 52 ---EDKVILPYLRRRLAYEAFFEEGIILEYMSIKVKAVMKHRHHNTETYALLFNGKLLYV 108 Query: 185 TDVNAFPAESLEKL-QNLDFLIIDAL--KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 T F LE +++ +II+ H H S+ +++K I+ + P+ AI+TH Sbjct: 109 T-CALFENRMLEVYPKHVKVMIINTTLYDKKAHIEHLSVEDAVKLIKEVKPQKAIITH-- 165 Query: 242 VDLDYDMVLKSTPSRV------------VPAFDGMQF 266 YD + P V + A DGM+ Sbjct: 166 --FGYDFLKSHKPEEVAKHITSLTGIETLAAHDGMEV 200 >gi|23100903|ref|NP_694370.1| hypothetical protein OB3448 [Oceanobacillus iheyensis HTE831] gi|22779137|dbj|BAC15404.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 261 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 86/270 (31%), Gaps = 65/270 (24%) Query: 38 TRSSLKISRVSE-----RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S + ++VD G D Q ++ +D +L TH H+D Sbjct: 3 LRFSVLASGSTGNAFYIETEQQKMLVDAGLSGKKIDELFQSIQVDPKQLDGILVTHEHSD 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ + +K + +YA + +S P+ + Sbjct: 63 HIKGLG-----IVARKYQLPIYANEKTWNAMDQSIGKI----------PLDQKFTFDMES 107 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 V + G +E H + + F VA TD+ + +++ D Sbjct: 108 VR-----SFGDLEVESFGVSHDAAEPMFYTFRHDGKKVALVTDLGYVSERIKKTVEDADA 162 Query: 204 LIIDA------LKNGLHS-----------SHFSLSES-LKKIELI--NPKNAILTHMH-- 241 I +A L+ G + H S + L ++I K L H+ Sbjct: 163 YIFEANHDVGMLRMGPYPWSVKRRILGDSGHVSNEDCGLALTDIISNRTKRIYLAHLSLD 222 Query: 242 ---VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 DL + V + R GMQ Sbjct: 223 NNMKDLAHMSVKQVLDER------GMQVEL 246 >gi|315639670|ref|ZP_07894810.1| metallo-beta-lactamase [Enterococcus italicus DSM 15952] gi|315484631|gb|EFU75087.1| metallo-beta-lactamase [Enterococcus italicus DSM 15952] Length = 296 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 41/255 (16%), Positives = 85/255 (33%), Gaps = 58/255 (22%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T+LG C P +S + +++D G Sbjct: 49 EKMKLTVLG----------------CLGAYPYKGEGTTSYLLE-----SDGFQLLIDAGS 87 Query: 63 DFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDC 114 +++ + L++DAV+ +H H DHI + L+ + Q P + +Y Sbjct: 88 TTLVELEKHLDPLALDAVILSHYHFDHIADLGVLQ--YYWQLSPGEKKQPLLPIYG---- 141 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 D+ + + P V + D + G + H ++ Sbjct: 142 ------------HGQDEIHFKALTMPNVSQGFDYLKEQQLDLGPFTVTFLQTVH-PVTCY 188 Query: 175 GFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLK 225 RF + D + + E + D L+ D + H +H + E+ + Sbjct: 189 AMRFVENRTGKVFVFTGD-SGYLETLNEFALSADLLLADTYLFEGHEYHHAHLTSKEAGQ 247 Query: 226 KIELINPKNAILTHM 240 ++ N ++ +LTH+ Sbjct: 248 LAKVANVQHLVLTHL 262 >gi|288959126|ref|YP_003449467.1| hypothetical protein AZL_022850 [Azospirillum sp. B510] gi|288911434|dbj|BAI72923.1| hypothetical protein AZL_022850 [Azospirillum sp. B510] Length = 274 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 74/241 (30%), Gaps = 53/241 (21%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + +I+D G M ++L E V S +L +H H DHI G Sbjct: 29 SCVEVQAGRQRIIIDAGTGLRMLGRKLLAEGVTSA-TLLLSHTHLDHISGF--------- 78 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +A L V +E P+ +++ GG + Sbjct: 79 -----PFFAPAYTKGFGLRVIS---GHLTGSPDIESVMARQMERPLFPVPLRTMGGDLSF 130 Query: 162 IPILQQHG----------------RISSLGFRFG----NVAYCTDVNAFPAE----SLEK 197 I + H + G+R ++AY TD P L Sbjct: 131 IEVPPGHSFKLEGGVRIHTAALNHPDGATGYRIEYQGRSIAYVTDTEHVPDRPDRNILNL 190 Query: 198 LQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 + +D L+ D+ H + E+++ + K L H D D+D Sbjct: 191 VDGVDLLLYDSTYTDEEWGQRIGWGHSTWMEAVRIARAAHVKRLGL--FHHDPDHDDAAM 248 Query: 252 S 252 Sbjct: 249 E 249 >gi|255024225|ref|ZP_05296211.1| ribonuclease Z [Listeria monocytogenes FSL J1-208] Length = 279 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 70/213 (32%), Gaps = 45/213 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 10 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 51 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++R + ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 52 QHQIMRSPIKLSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGESDLTIYGPVGITEYVET 111 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 S I N++ + + HG + S G+R Sbjct: 112 SL----------RLSGTRLTYKIIFNEIEPGLIFEDKMFSITVDELDHG-LRSFGYRIV- 159 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + N D LI D ++ G Sbjct: 160 -----------EKDKPGALNADKLIDDGVEPGP 181 >gi|19074294|ref|NP_585800.1| similarity to HYPOTHETICAL PROTEINS YATA_SCHPO [Encephalitozoon cuniculi GB-M1] gi|19068936|emb|CAD25404.1| similarity to HYPOTHETICAL PROTEINS YATA_SCHPO [Encephalitozoon cuniculi GB-M1] Length = 744 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 85/260 (32%), Gaps = 54/260 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G ++ P R SS+ + +++D G D Q+ Sbjct: 465 FLGTGCAI----------------PSKYRNVSSILYE-----SDSAAIMLDCGEDALFQI 503 Query: 69 LREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA----PDCMKHLF 119 R + + A+ +H HADH+ GI + I ++A P Sbjct: 504 HRAYGELDVLKKLRAIFISHSHADHVLGI---ASVLKRLDHRIKIFAPVAIRPFVEHFGA 560 Query: 120 ESFRYC---FKALDDRTYPPIVNPIVIENNDVPICMKSAGGV----IEAIPILQQHGRIS 172 +S Y +R + + + I ++ E H Sbjct: 561 KSHEYIETNHAKGLERVFRDKIGTPTQDFPSHTINVEDYLLRSDAGFEIAICGVDHCS-D 619 Query: 173 SLGFRFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLS 221 S G R + +AY D P+ + N D +I +A + H+ H ++ Sbjct: 620 SCGIRVRDGTTVLAYSGDSR--PSTLFGMMSSNSDVMIHEATFASDQQERAAHTGHSTID 677 Query: 222 ESLKKIELINPKNAILTHMH 241 E+ K E+ + +LTH Sbjct: 678 EAAKIFEMSQSRTLLLTHFS 697 >gi|168181035|ref|ZP_02615699.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226951022|ref|YP_002806113.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|182668141|gb|EDT80120.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226844450|gb|ACO87116.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] Length = 261 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 50/208 (24%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + +S + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKS-------------VGKIKEHNIEILDGKSVV---INDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHV 242 ++L K IL+++ Sbjct: 177 P--YTL------------KRRILSNIGH 190 >gi|229542347|ref|ZP_04431407.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229326767|gb|EEN92442.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 264 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 64/221 (28%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGPDFYM--QV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G Q+ + + + +L TH H+DHI GI L +K + Sbjct: 22 EQHAFLVDAGLSGRQMEQLFGQIGRNIADLSGILVTHEHSDHIKGIG-----VLARKYQL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + L + + G +E Sbjct: 77 PVYANDKTWSAMEGMIGEIPTDLKFS---------------FGMESVQSFGSLEIESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F + TD + N D + ++ L+ G + Sbjct: 122 SHDAAQPMFYIFHEGGKKLVIITDTGYVSDRMKGTISNADIFVFESNHDVEMLRMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L E+I K L H+ D Sbjct: 182 SVKQRILSDVGHVSNEDAALAMGEVIGDRTKRIYLAHLSKD 222 >gi|116495216|ref|YP_806950.1| beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|116105366|gb|ABJ70508.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus casei ATCC 334] Length = 245 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 40/240 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DHI + L+ Y+ +K Sbjct: 25 ESGDYHLLMDLGSGGLLSLEQQFDPLKLDAVLLTHYHHDHIADVGVLQYYYQLRKGDKKV 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F + Y + G + Sbjct: 85 SPLPIYGHTKDPLNFASLTFG---PYTTAKGYTADSTLHL--------------GPLTLT 127 Query: 163 PILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH 214 + QH + + R + +D FPA + ++ D L+ D L + Sbjct: 128 FLETQH-PVPAFAVRIVEDVTGKTLVNTSDTRCFPALA-PFSKDADLLMADTNFLADQPQ 185 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMV--LKSTPSR---VVPAFDGMQFSS 268 H + E+ K + K +LTH+ LD + T + + A D + S Sbjct: 186 PRWHLTAPEAGKLAKDAQVKRLLLTHLPQQLDLVTLKQQAQTAAGGIPIQLAEDDLTISI 245 >gi|17232339|ref|NP_488887.1| hypothetical protein alr4847 [Nostoc sp. PCC 7120] gi|17133984|dbj|BAB76546.1| alr4847 [Nostoc sp. PCC 7120] Length = 298 Score = 65.5 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 81/253 (32%), Gaps = 44/253 (17%) Query: 52 SNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +I D TG Q L Q+ + +TH H DH+ G F+K +Y Sbjct: 41 AGKRLIFDGGTGLHVLGQSLLRQMPIEAYLFFTHSHWDHMQGFPFFVPGFVK-GNNFHIY 99 Query: 110 AA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 A + L + + P + + +DV + I Sbjct: 100 GAIAPDGSTVEQRLNDQM-----LHPNFPVPLQIMQANLHFHDVQPGLPIHINDITIETA 154 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAE----SLEKLQNLDFLIID--------- 207 H ++G+R G Y TD FP + L +N D LI D Sbjct: 155 ALNHPG-EAVGYRVNWRGGAAVYITDTEHFPDKLDENVLRLAKNADILIYDSTYTDEEYH 213 Query: 208 -ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD---------MVLKSTPSRV 257 A + H + E++K + N K + H D +D S Sbjct: 214 CAKSPKIGWGHSTWQEAVKIAKAANVKTLGI--FHHDPAHDDDFLDQVGAQAFAQF-SGA 270 Query: 258 VPAFDGMQFSSPI 270 + A +GM P+ Sbjct: 271 IMAREGMVLQVPV 283 >gi|330466052|ref|YP_004403795.1| beta-lactamase domain-containing protein [Verrucosispora maris AB-18-032] gi|328809023|gb|AEB43195.1| beta-lactamase domain protein [Verrucosispora maris AB-18-032] Length = 248 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 45/248 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S P + S + + +++D GP Sbjct: 1 MRLTVLGCAGSFPGPE-----------------SPCSAYLI----EAEDFRLLIDFGPGS 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAPDCMKH 117 + R + + DA+L TH H DHI +D +++ P+ VYA + Sbjct: 40 LSTLQRYAGLHAPDAILLTHLHCDHI--LDATSYVVVRRYAPDGPYPPLPVYAPAGAPER 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGF 176 L ++ +++D + P + + IE + +H GR+ Sbjct: 98 LATAYGQEGASVEDVYQFYALEPGTFPIGPFTVTVDRVLHPIETYGVRLEHDGRVLCY-- 155 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELINP 232 G+ A C + QN D + +A H + E+ + Sbjct: 156 -SGDTAPC-------EALIRLAQNADTFLCEASYLDGVDNPPDLHLTGREAGEAAAKAGV 207 Query: 233 KNAILTHM 240 +LTH+ Sbjct: 208 GRLLLTHL 215 >gi|322391844|ref|ZP_08065309.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321145324|gb|EFX40720.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 269 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + +DA+L TH H DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHTDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+P + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDPS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH-- 214 H ++ +RF + TD ++N D +I+A L+ G + Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIEANHDVEILRAGSYAW 186 Query: 215 ---------SSHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + + + K L H+ +L + ++ Sbjct: 187 RLKQRILSDRGHLSNEDGAEAMVRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|289423996|ref|ZP_06425785.1| ribonuclease Z [Peptostreptococcus anaerobius 653-L] gi|289155571|gb|EFD04247.1| ribonuclease Z [Peptostreptococcus anaerobius 653-L] Length = 305 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 92/325 (28%), Gaps = 94/325 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 + +LG G VP S L I+ +++D G Sbjct: 3 NLLMLGTG--GNVPSYNRFC--------------SCLFINYKG-----KKILIDCGEGTQ 41 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 + + R +D +L TH H DHI+G+ GL +++ P+ + + Sbjct: 42 IAMKRYGCGFKDVDLLLITHLHGDHINGMLGLLATMGNSEKRNPLTIVGPRGIKNAIRAM 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRIS---SLGFR 177 + + + VIEN + IE + H SL FR Sbjct: 102 M----VLWEGLPF----SLRVIENPAGSFSLIDDVFKEIEISTLEVSHSTECLAYSLYFR 153 Query: 178 ------------------------FGNVAYCTDVNAFPA--------------------- 192 G Y D + P Sbjct: 154 RNRLFDIEKAKSNDVPKKLWKGLQSGRTYYIDDRSYVPDMVLGRERRGIKLSYVTDTRPV 213 Query: 193 ESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 ES+ + + D I + + + + H + E+ + ++TH L Sbjct: 214 ESIPDFIYGSDLFICEGTYGDDMDIAKAVKNKHMTFREAAGLAKSGKVDKLLITHFSPSL 273 Query: 245 ----DYDMVLKSTPSRVVPAFDGMQ 265 DY S V A DG++ Sbjct: 274 EEPKDYMANATSVFKNTVIAHDGIR 298 >gi|4960194|gb|AAD34636.1|AF153678_5 unknown [Myxococcus xanthus] Length = 309 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 69/225 (30%), Gaps = 25/225 (11%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQ 102 V R + +I D G L + + + +H H DH+ G+ +L Sbjct: 62 CVEVRCGDELLIFDLGTGARALGHALVAKKKPVKGSIFISHYHYDHLQGLPFFGPMYLPT 121 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY + + + V + D+ G Sbjct: 122 -SDLTVYGPARHGQSVKQLLSGQMVPPYFPVTADGVFRAQLTYTDLAATQTLKLGPATVH 180 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDV---NAFPAESLEKLQNLDFLIIDAL------ 209 I H ++G+R +V Y TD+ + A Q+ D LI DA+ Sbjct: 181 TIELNHPG-GNMGYRVECQGRSVVYATDLEHGSDMDAAFYAFAQDADVLIYDAMYTEDEY 239 Query: 210 --KNGLHSS---HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + G + H + ++ + K +L H D D Sbjct: 240 HGRTGPARTGWGHSTWQAAVHAADEAGVKKLVL--FHHDPSRDDA 282 >gi|281424399|ref|ZP_06255312.1| VicX protein [Prevotella oris F0302] gi|281401668|gb|EFB32499.1| VicX protein [Prevotella oris F0302] Length = 290 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I+D G + + ++ +L TH HADH+ + L + + Sbjct: 44 ETDGLIIDAGVGIRTLKKHFKNYGLHLDNVHHMLITHDHADHVKSVGSLSKDYG-----L 98 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVY + ++ F I V + G + P Sbjct: 99 DVYTTHSVHVGIEHNY---FVKKKIEP---------IHVKIVEKGVTFKLGEFKVTPFGV 146 Query: 167 QHGRISSLGFRF--GNVAY--CTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H ++G++ G+V + TD+ E + ++L+I+A L G + Sbjct: 147 PHDSSDNVGYKVCYGDVVFVLMTDIGHITPEMQPYISEANYLVIEANHDVEMLSQGPYPQ 206 Query: 217 HF------------SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H + + + P K L H+ + ++ ++ + T Sbjct: 207 HLKMRILGPNGHLSNADCAQAIADDATPQLKKVWLCHLSEENNHPILAQKT 257 >gi|227486135|ref|ZP_03916451.1| possible beta-lactamase [Anaerococcus lactolyticus ATCC 51172] gi|227235899|gb|EEI85914.1| possible beta-lactamase [Anaerococcus lactolyticus ATCC 51172] Length = 263 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 70/231 (30%), Gaps = 56/231 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLR------EQVLSIDAVLYTHPHADHIHGIDG 94 S+ I T ++VD G Q+ R E +D + TH HADH G Sbjct: 15 SVFIEH-----DGTKILVDAGFSGR-QIERLLESVGESATKLDGIFLTHEHADHAKG--- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L ++ I ++A K + P N + Sbjct: 66 --AAVLAKRFKIPLFANRGTWKAIL---------------PTTKNFSEELIGEFKSNEFL 108 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI----- 205 ++ PI H +GF + TD + ++Q D Sbjct: 109 NFKSMDIYPISTYHDANEPVGFVLYLGNKKITLLTDTGMIDDKIAYQIQGSDIYYLEANH 168 Query: 206 -IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 ++ALK G + H S ++ + + ++ L+H+ Sbjct: 169 DLEALKMGPYPYNLKLRVMGKMGHLSNDQAAEILGDALEGRGESVFLSHLS 219 >gi|227534763|ref|ZP_03964812.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187519|gb|EEI67586.1| metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 245 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 40/240 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DHI + L+ Y+ +K Sbjct: 25 ESGDYHLLMDLGSGGLLSLEQQFDPLKLDAVLLTHYHHDHIADVGVLQYYYQLRKGDKKL 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F + Y + G + Sbjct: 85 SPLPIYGHTKDPLNFASLTFG---PYTTAKGYTADSTLHL--------------GPLTLT 127 Query: 163 PILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH 214 + QH + + R + +D FPA + ++ D L+ D L + Sbjct: 128 FLETQH-PVPAFAVRIVEDVTGKTLVNTSDTRCFPALA-PFSKDADLLMADTNFLADQPQ 185 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMV--LKSTPSR---VVPAFDGMQFSS 268 H + E+ K + K +LTH+ LD + T + + A D + S Sbjct: 186 PRWHLTAPEAGKLAKDAQVKRLLLTHLPQQLDLVTLKQQAQTAAGGIPIQLAEDDLTISI 245 >gi|222478515|ref|YP_002564752.1| ribonuclease Z [Halorubrum lacusprofundi ATCC 49239] gi|254808639|sp|B9LQT0|RNZ_HALLT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|222451417|gb|ACM55682.1| ribonuclease Z [Halorubrum lacusprofundi ATCC 49239] Length = 310 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 92/313 (29%), Gaps = 77/313 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G ++ P R S+L ++R +R ++ D G Sbjct: 2 SLRVTFLGTGGAV----------------PTTERAPSALFVNREGDR-----LLFDCGEG 40 Query: 64 FYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++R ID + +H H DH+ GI GL F + P+ ++ P L + Sbjct: 41 TQRGMMRFGTGFGIDHLFVSHLHGDHVLGIPGLVQTLGFNDRAEPLTIHCPPGTEDDLHD 100 Query: 121 -----SFRYCFKALDDRTYPPIV--------------------NPIVIENNDVPICMK-- 153 F+ + P V V+E +D P Sbjct: 101 LVHAVGHDPAFQIRIESVAPGEVALDADGYEVRAFETVHRTKSQGYVLEEDDRPGRFDRP 160 Query: 154 -----------SAGGVIEAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLE 196 G + E P+ + G I G Y D ++ Sbjct: 161 KAEELGVPVGPKFGRLHEGEPVEAEDGSIVEPDQVVGPPRPGRKFVYTADTRP-REGTVA 219 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 ++ D L+ DA ++H + E+ E K L H+ Y Sbjct: 220 VAEDADLLVHDATFADDMEDRARDTAHSTGREAGSVAERAGAKRLALVHISSR--YAADA 277 Query: 251 KSTPSRVVPAFDG 263 AFDG Sbjct: 278 SPIRREAREAFDG 290 >gi|312623045|ref|YP_004024658.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203512|gb|ADQ46839.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 265 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 85/241 (35%), Gaps = 59/241 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQV---LSIDAVLYTHPHADHI--HGID 93 S+ IS +T++IVD G F Q L E++ IDA+L +H H+DH+ GI Sbjct: 18 SILISY-----KDTSIIVDAGVSFKKLTQGL-EKIGFNKKIDAILLSHDHSDHVKCAGI- 70 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 +K + + + + S D +Y +++ Sbjct: 71 ------YFRKLNVPIITNYKTWESIKNSLG-----KVDESYVKLIDT----------GTS 109 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 + G I H +GF F V+ CTDV + D +++++ Sbjct: 110 FSVGSIGIDTFSIPHDASDPMGFCFYFKDKKVSICTDVGHVNDSVARMIDFSDIILLESN 169 Query: 209 -----LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMV 249 L G + H S ++ + I +N K L H+ + ++ V Sbjct: 170 HDVEMLMFGPYPYYLKQRIKSDKGHLSNEQAAQMILRLNLDRTKRIYLGHLSEENNHPDV 229 Query: 250 L 250 Sbjct: 230 A 230 >gi|210623767|ref|ZP_03294027.1| hypothetical protein CLOHIR_01978 [Clostridium hiranonis DSM 13275] gi|210153349|gb|EEA84355.1| hypothetical protein CLOHIR_01978 [Clostridium hiranonis DSM 13275] Length = 304 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 105/313 (33%), Gaps = 77/313 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 + T+LGCG VP R SSL ++ + ++VD G Sbjct: 3 NLTLLGCG--GNVPLPN--------------RFLSSLFMNF-----NGRKILVDCGEGTQ 41 Query: 66 --MQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA---PDCMKHL 118 M++ ID + TH H DHI G+ GL ++K+P+ + + M + Sbjct: 42 VSMKMKGCGFKDIDLICITHTHGDHIIGLIGLLSTMGNSERKKPVTIIGPVGIKEAMDAI 101 Query: 119 FE--SFRY---CFKALDD--RTYPPIVNPIVIENNDVPICMKSAGGVIEAI--------- 162 + Y + + PI++ + IE ++ + G Sbjct: 102 QVLITLPYKLNIIENPEGIFSLVDPILSDLSIETIELEHSTECIGYNFYFARHPKFNVEK 161 Query: 163 ----PILQQHGRISSLGFRF--GNVAYCTDV------NAF---------PAESL-EKLQN 200 + +++ + G +V Y D+ P +++ E + + Sbjct: 162 AKQNNVPRKYWNMLQKGMTIMDEDVNYTPDMVLGDDRKGIKISMITDTRPLDTIPEFIYD 221 Query: 201 LDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD----YDMV 249 D I +A + + + H E+ N K +LTH ++ ++ Sbjct: 222 ADLFICEAMYGDEMDISKAIKNKHMLFREAASLAVRGNAKQLLLTHFSPSIEDPNVFENN 281 Query: 250 LKSTPSRVVPAFD 262 KS + +D Sbjct: 282 AKSVFENTIIGYD 294 >gi|34541698|ref|NP_906177.1| metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis W83] gi|188994033|ref|YP_001928285.1| probable metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis ATCC 33277] gi|34398016|gb|AAQ67076.1| metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis W83] gi|188593713|dbj|BAG32688.1| probable metallo-beta-lactamase superfamily protein [Porphyromonas gingivalis ATCC 33277] Length = 269 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 84/255 (32%), Gaps = 55/255 (21%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDA----VLYTHPHADHIHGIDGLRGYFLKQK 103 N +++D G + L++ L I+ VL TH HADHI I L +K Sbjct: 19 SNGNQALLIDAGIPLRSISKALKDHQLPIEGNVVGVLVTHDHADHIRTIG-----CLGEK 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + V+A + + Y + + N + AG I A P Sbjct: 74 FHLPVFATERVHNGI-----------NSSRYMDHLPLLSRRNILQEETFRLAGFDITAFP 122 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 I H ++G+ + CTDV D+L+++A L +G Sbjct: 123 IP--HDATENVGYHITAPGFSFTLCTDVGHITDTISHYASKADYLVMEANYDCEMLLSGP 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL------KST 253 + H S E+ + K+ L H+ D ++ + + Sbjct: 181 YPEFLKERVSGPNGHLSNQETGDFLARTFHPGMKHVWLCHLSKDNNHPDLCWKSIEYRLF 240 Query: 254 PSRVVPAFDGMQFSS 268 + D M+ + Sbjct: 241 SEGIRVGKD-MELTV 254 >gi|116621557|ref|YP_823713.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224719|gb|ABJ83428.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 269 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 57/179 (31%), Gaps = 35/179 (19%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G ++ E + SIDA++ TH H+DH+ G+ + Sbjct: 31 ENTRILVDAGLSMRELRKRLALIGETLESIDAIIVTHEHSDHVSGLP---VLARAKGLRA 87 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + G IE Sbjct: 88 VIYMTRLTAPAIDWG-----------------ETTPVRLESFQAGAAFQIGDIEVQSFGI 130 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H I +G+ F V TD+ P L+ + L+++A LK G + Sbjct: 131 PHDAIDPVGYCFEAEGVRVGIATDLGYVPESIKFHLRRTNVLLLEANHDLDMLKVGPYP 189 >gi|110638313|ref|YP_678522.1| ribonuclease Z [Cytophaga hutchinsonii ATCC 33406] gi|123058763|sp|Q11TT4|RNZ_CYTH3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110280994|gb|ABG59180.1| RNAse Z [Cytophaga hutchinsonii ATCC 33406] Length = 313 Score = 65.5 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 97/292 (33%), Gaps = 77/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILG ++ P R +S+ + + N ++D G Sbjct: 3 FELFILGSSSAT----------------PSKGRYQSAQLL-----KIHNDYFMIDCGEAA 41 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF- 119 Q+ R ++ I + +H H DH G+ GL +K PI V+ P + + Sbjct: 42 QYQLSRYKLNHTKISHIFISHLHGDHFFGLVGLLSTMNLYGRKNPIHVFGPPGLDEIIQI 101 Query: 120 --------ESFRYCFKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIP------ 163 F + L++ I++ +++ +P+ ++ G + + P Sbjct: 102 QLKYSETLLQFPLHYTTLENEGSEHILDHPLVDVYTIPLEHRIRCNGFLFKEKPKSYKLN 161 Query: 164 ---------------------ILQQHGRISSL-------GFRFGNVAYCTDVNAFPAESL 195 + ++G + +L + + AYC+D + Sbjct: 162 KSKLPEDLSLLEIAQLKQGIDVYDENGNVKALVREICMPALKSRSYAYCSDTK-VNEQYF 220 Query: 196 EKLQNLDFL-----IIDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMH 241 ++ +D L +D L + + H + ++ + + I+ H Sbjct: 221 PYIKGVDLLYHESTFLDELADRAAKTYHTTAKQAAQVAKEAEAGKLIIGHFS 272 >gi|94989690|ref|YP_597790.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94543198|gb|ABF33246.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS10270] Length = 259 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRNEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNEKHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|95930093|ref|ZP_01312832.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95133787|gb|EAT15447.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 258 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 55/216 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I T +++D G ++ + S+DAV TH H+DH G+ L Sbjct: 14 SLYIE-----SEKTRILIDAGLSALQISCRLEQIGVDADSLDAVFVTHEHSDHCRGLGPL 68 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 ++ + ++ PD + V +E I Sbjct: 69 S-----RRHKLPIFFHPDTHAAI-------------------VKLGKVEERFFDIGETVV 104 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 + P H + +GF G + TD+ + LQ L+++ Sbjct: 105 FQDVLIQPFPITHDAAAPVGFVVDTCDGKIGVATDMGIATRLVQQSLQQCRVLVLETNHD 164 Query: 209 ---LKNGL-----------HSSHFSLSESLKKIELI 230 L++G H H S ++ + ++ + Sbjct: 165 EEMLRDGPYPWPLKQRIRSHHGHLSNADGAQLLQQV 200 >gi|319950364|ref|ZP_08024282.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Dietzia cinnamea P4] gi|319435982|gb|EFV91184.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Dietzia cinnamea P4] Length = 281 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 89/286 (31%), Gaps = 52/286 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR-RTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG GA+ G P +CD R ++ + + +++D GP+ Sbjct: 1 MEVVLLGTGAADGWPNPFCRCTSCDEARRLGAVRGQTCALV--------DDELLIDCGPE 52 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP----IDVYAAPDCMKH 117 +R + S+ +L TH HADH+ + + P ++V D ++ Sbjct: 53 APGAAVRLGRTLASVRHLLITHAHADHLG----PQALLYRSWVPDAGELEVVGPADALEV 108 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR------I 171 R + +P+ + G + +P + R Sbjct: 109 C-------------RPWVGPDDPVRFVPVAAGDRLTVGGYDVRVLPARHRVFRDGDAVLY 155 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLD---FLIIDAL--KNGLHSSHFSLSESLKK 226 G + + TD + + +++ + + L + L +H LS Sbjct: 156 DLTGPDGARLLWATDTGPWDEDWFAAVRDARFDAVFLEETLGDREELSPAHLGLSRFADM 215 Query: 227 IELIN-------PKNAILTHM-HVDLDYDMVLKSTPS-RVVPAFDG 263 + + + H+ H + D++ DG Sbjct: 216 LARLREVGAVVDESEVVAVHLGHHNPPPDVLDARLRELGARAGVDG 261 >gi|227833922|ref|YP_002835629.1| Metal-dependent hydrolases of the beta- lactamase superfamily III [Corynebacterium aurimucosum ATCC 700975] gi|262184925|ref|ZP_06044346.1| Metal-dependent hydrolases of the beta- lactamase superfamily III [Corynebacterium aurimucosum ATCC 700975] gi|227454938|gb|ACP33691.1| Metal-dependent hydrolases of the beta- lactamase superfamily III [Corynebacterium aurimucosum ATCC 700975] Length = 255 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 96/286 (33%), Gaps = 53/286 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP + NP S +S S ++I+D GP Sbjct: 1 MKLTILGC--SGSVPTVG---------NPA-----SGYLLSFPSAP----SIIMDLGPGT 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCM 115 +Q L++ + V TH HADH L + ++ P Sbjct: 41 LARLQELQDPCDA--HVALTHLHADHCLDFPSLMVW--RRFHPTAPAASRNFCLGPASTE 96 Query: 116 KHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 HL +DD + + P V+ +DV I +E + +H + Sbjct: 97 THLGRLSSDAPDGVDDMSDTFAFSPWVDRERQLVDDVYITPFRTVHPVETYALRVEHSKT 156 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKK 226 + + Y D +A+ +E Q +D + +A ++ H S +E+ + Sbjct: 157 GAT------LCYSAD-SAYTPALVEAAQGVDAFLCEAAWGETSEDKAPDMHMSGAEAGRL 209 Query: 227 IELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPAFDGMQFSS 268 K +L H+ D Y + +V GM+ Sbjct: 210 AREAGVKKLVLVHLQPWGDAAATYAAAAREFDGEIVVGAAGMELEF 255 >gi|85858977|ref|YP_461178.1| seceted metal-dependent hydrolase [Syntrophus aciditrophicus SB] gi|85722068|gb|ABC77011.1| seceted metal-dependent hydrolase of the beta-lactamase superfamily III [Syntrophus aciditrophicus SB] Length = 319 Score = 65.2 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 34/237 (14%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R +++D G FY + + + + TH H DHI G+ L + Q I Sbjct: 95 RSEAFDLVLDAGNGFYKLDRFINDTNTRPLYLFLTHFHLDHIIGLHTLNKFSFPQGLVI- 153 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVN--PIVIENNDVPICMKSAGGVIEAIPIL 165 P+ K L F +R + ++ P +E ++P C+ +EA+ + Sbjct: 154 --CGPEGSKELLAQF-------VNRPFTAAISALPYPVEILELPDCLSKLPFPVEALTLN 204 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----H 217 + +LG+R ++YC+D + ++ ++ D LI + SS H Sbjct: 205 HP---VPTLGYRISLDGRVISYCSDT-GYCENAVILSRSADLLISECAYRAGQSSDAWPH 260 Query: 218 FSLSESLKKIELINPKNAILTHMHVDL--------DYDMVLKSTPSRVVPAFDGMQF 266 + + + K +LTH L + + V + + A D ++ Sbjct: 261 LNPEGAARIAAEAGVKRLVLTHFDARLYTVSAFRDESEAVARKIFPQTSAARDDLEI 317 >gi|293115311|ref|ZP_05790857.2| VicX protein [Butyrivibrio crossotus DSM 2876] gi|292810350|gb|EFF69555.1| VicX protein [Butyrivibrio crossotus DSM 2876] Length = 276 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 75/235 (31%), Gaps = 52/235 (22%) Query: 52 SNTTVIVDTG-PDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + +L + IDA+L TH H DH G+ L Y PI Sbjct: 31 ETTHILIDDGISRKRVIEGLTMLDIKAEDIDALLITHEHDDHTSGLGVLERYC-----PI 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + K + P I D G + Sbjct: 86 PVYGTGMTLAAIENN-SKLGKVPEGIFNP-------IHAGD-----SFMIGDVTIKSTSV 132 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + + F TD+ + E +E +NLD LI I+ L G + Sbjct: 133 SHDAADPVAYTFSSGKSKAGIITDLGVYTDEIVENFKNLDTVLIESNHDINMLMTGPYPY 192 Query: 216 ----------SHFSLSESLKKIELINPKNA---ILTHMHV-----DLDYDMVLKS 252 H S + + + I L H+ +L Y+ V + Sbjct: 193 VLKQRILGGKGHLSNEDCGRLLNGILGGRTGSVFLGHLSKENNFPELAYETVRQE 247 >gi|124486183|ref|YP_001030799.1| hypothetical protein Mlab_1365 [Methanocorpusculum labreanum Z] gi|124363724|gb|ABN07532.1| ribonuclease Z [Methanocorpusculum labreanum Z] Length = 312 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 84/293 (28%), Gaps = 87/293 (29%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG +L P R S + I R S+ T++ D G Q+ Sbjct: 10 FLGTAGALPTPL----------------RNPSCIMIRRGSD-----TLLFDCGEGAQQQM 48 Query: 69 LREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA-------------- 111 +R + +++AV TH HADH GI GL F + P+ +Y Sbjct: 49 MRLKTGFTVNAVFITHWHADHYLGIFGLIETMAFNGRTEPLTLYGPRGIDWFVNIIHQLT 108 Query: 112 ---PDCMKHLFE------SF-RY---CFKALDDRTYPPIVNPIVIENNDV---------- 148 P + + F Y F+ V + Sbjct: 109 PKIPFTLSAIEVSDGDVIMFDGYSVVAFRTFHGMESIGYVLEEDMRPGRFDREGAISLGV 168 Query: 149 -------------PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL 195 P+ + + P + R R V Y D Sbjct: 169 KPGPMFGKLQRGSPVTILRGDEEVTITPEMVMGERR-----RGRKVVYTGDTRPV-KNQP 222 Query: 196 EKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMH 241 E L N D LI +A + S H + E+ + L+ PK L H Sbjct: 223 ELLANADLLIHEATFDEEEGSERAKEAWHSTACEAGQVAALVKPKILALVHFS 275 >gi|15616585|ref|NP_244891.1| hypothetical protein BH4023 [Bacillus halodurans C-125] gi|10176648|dbj|BAB07742.1| BH4023 [Bacillus halodurans C-125] Length = 264 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 54/254 (21%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S + ++VD G D Q + ++ +L TH H+D Sbjct: 3 LRFSVLASGSTGNALYVETDKQKLLVDAGLSGKKMDELFQKIDCDPSQLNGILVTHEHSD 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ + +K + +YA + + ++ + Sbjct: 63 HIKGVG-----IVARKYNLPIYANAKTWQAMEKALG---------------TLTTDQRFH 102 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 I +E H + + F + TD+ + ++N D Sbjct: 103 FEIGEVKTFADLEVESFGVSHDAAEPMFYVFHHDGKKLVLATDMGYVSERIKKTIENADT 162 Query: 204 LI------IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 LI ++ L+ G + H S ++ + + + L H+ +D Sbjct: 163 LIFEANHDLNMLRMGRYPWNVKRRILSDVGHVSNEDAAYALAEVIGDRTERIYLAHLSLD 222 Query: 244 LDYDMVLKSTPSRV 257 + + + T +V Sbjct: 223 NNMKELARLTVEQV 236 >gi|170291069|ref|YP_001737885.1| ribonuclease Z [Candidatus Korarchaeum cryptofilum OPF8] gi|170175149|gb|ACB08202.1| ribonuclease Z [Candidatus Korarchaeum cryptofilum OPF8] Length = 301 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 102/325 (31%), Gaps = 85/325 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG ++ VP K+R + + + + + ++++D G Sbjct: 1 MRIKFLGTSSA--VPT-------------KDRGLPA-ILVKTMGD-----SILLDCGEGT 39 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP-------- 112 Q++ +E ++ ID V+ TH H DH G+ + L++ + + Sbjct: 40 QRQMIMAKESIMDIDKVVITHLHGDHFFGLFPMIQTLSILRKGSELTILGPRSLEPLLTS 99 Query: 113 ------------------------------DCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 + + F + +R P +P Sbjct: 100 IMEGTGSKPGFKVNFIGIERSEMRLGNFTLEFFEVNHNGFETYGVKVKERDRPGEFDPRK 159 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLE 196 + VP+ M+ + + GRI + G G + Y +D + Sbjct: 160 ADELGVPVFMRGFLQ--KGYSVKLPDGRIVNPGDVMGPPRRGSVLVYSSDTRP-TESVIR 216 Query: 197 KLQNLDFLI-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLD----- 245 ++ D LI +D LK+ S+ H + E+ + K ILTH Sbjct: 217 ASRDADLLIHEATYLDELKDRAESTGHSTALEAGEVASASGVKRLILTHFSARYSDEDLL 276 Query: 246 --YDMVLKSTPSRVVPAFDGMQFSS 268 + K+ V+ A D + Sbjct: 277 KFREEASKAYNGEVLVAKDFLTVEI 301 >gi|94993569|ref|YP_601667.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|94547077|gb|ABF37123.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS10750] Length = 259 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|289551861|ref|YP_003472765.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus lugdunensis HKU09-01] gi|289181392|gb|ADC88637.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Staphylococcus lugdunensis HKU09-01] Length = 260 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H+DHI G+ L +K Sbjct: 16 ESEKGSLLVDVGLTGKKMENLFSQIDR-NISDLNGILVTHEHSDHIKGLG-----VLARK 69 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA K + + P+ + + AG IE+ Sbjct: 70 YHLPIYANEKTWKMIEK----------KDNKIPMEQKFIFNPYE---TKSIAGFDIES-- 114 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD + D + +D L+ Sbjct: 115 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCR 174 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 175 YPWKTKQRILSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 218 >gi|229524234|ref|ZP_04413639.1| arylsulfatase [Vibrio cholerae bv. albensis VL426] gi|229337815|gb|EEO02832.1| arylsulfatase [Vibrio cholerae bv. albensis VL426] Length = 316 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 39/228 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKR 104 + V++D G LR + +D + TH H DH+ + L GYF K++ Sbjct: 59 GKSRVMIDAGGG---SFLRFGQSGSTLEDLDFLGITHFHTDHVADLPALLKGGYFFKRED 115 Query: 105 PIDVYAAPD--CMKHLFESFRYCFKALDD------RTYPPIVNPIVIENNDVPICMKSAG 156 P+D+ L F + D Y + DVP + Sbjct: 116 PLDIAGPQAGSAFPSLTGYMDALFNSKDGAYAYLNGLYDGSDGLFPVTITDVPYKTTTPI 175 Query: 157 GV-----IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 V + + HG + L +R G + D N + Q+ D L++ Sbjct: 176 KVYQQDGLTIYALGIPHGDVPCLAYRIESDQGVIVISADQNGSNPAFYDFAQDADILVM- 234 Query: 208 ALKNGLHSS--------HFSLSESLKKIELINPKNAILTH-MHVDLDY 246 +H S H S + INPK +L H M V L + Sbjct: 235 --PMAIHESADDVSAFMHAKPSVIGEIAAKINPKLLVLNHWMGVGLKH 280 >gi|327463118|gb|EGF09439.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1] gi|327474729|gb|EGF20134.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK408] gi|327490286|gb|EGF22074.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK1058] Length = 266 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 93/294 (31%), Gaps = 77/294 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI--V 58 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D P+ +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 47 DRKPE-----------DLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + G ++ H +RF Sbjct: 91 EKDLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRF 135 Query: 179 ----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SH 217 + TD ++N D +LI I+ L++G + H Sbjct: 136 MKDDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGH 195 Query: 218 FSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 S + + I + K L H+ +L + ++ + + D Sbjct: 196 LSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|156447655|gb|ABU63624.1| YycJ [Staphylococcus lugdunensis] gi|156447663|gb|ABU63631.1| YycJ [Staphylococcus lugdunensis] gi|156447671|gb|ABU63638.1| YycJ [Staphylococcus lugdunensis] gi|156447679|gb|ABU63645.1| YycJ [Staphylococcus lugdunensis] gi|156447687|gb|ABU63652.1| YycJ [Staphylococcus lugdunensis] Length = 266 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H+DHI G+ L +K Sbjct: 22 ESEKGSLLVDVGLTGKKMENLFSQIDR-NISDLNGILVTHEHSDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA K + + P+ + + AG IE+ Sbjct: 76 YHLPIYANEKTWKMIEK----------KDNKIPMEQKFIFNPYE---TKSIAGFDIES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD + D + +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 181 YPWKTKQRILSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|153939415|ref|YP_001392920.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|170755168|ref|YP_001783205.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|152935311|gb|ABS40809.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|169120380|gb|ACA44216.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|295320896|gb|ADG01274.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 261 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 82/238 (34%), Gaps = 55/238 (23%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + +S + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKS-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGVFSKDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKST 253 H S + + I I KN IL H+ +L Y VL + Sbjct: 177 PYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNAL 234 >gi|159036641|ref|YP_001535894.1| beta-lactamase domain-containing protein [Salinispora arenicola CNS-205] gi|157915476|gb|ABV96903.1| beta-lactamase domain protein [Salinispora arenicola CNS-205] Length = 248 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 81/252 (32%), Gaps = 53/252 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S P + S + + ++VD G Sbjct: 1 MRLTVLGCAGSFPGPE-----------------SPCSAYL----VEAAGFRLLVDFGSGS 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAPDCMKH 117 + R + S DAVL TH H DH +D +++ P+ VYA Sbjct: 40 LSTLQRYAGLHSPDAVLLTHLHGDHF--LDAALYVVVRRYAPDGPYPPLPVYAPAGAPDR 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + D T + ++ PI G + H I + G R Sbjct: 98 LAAACG-----PQDGTVEDVYQFYALQPGSFPI------GPLTVTVDRVNH-PIETYGVR 145 Query: 178 FGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDALK----NGLHSSHFSLSESLKKIE 228 + + Y +D P E+L +L Q D + +A H + E+ + Sbjct: 146 LEHNGRVLCYSSDTA--PCEALLQLAQGADVFLCEASYLDGVENPPDLHLTGREAGEAAA 203 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 204 KAGVGRLLLTHL 215 >gi|302392988|ref|YP_003828808.1| beta-lactamase domain protein [Acetohalobium arabaticum DSM 5501] gi|302205065|gb|ADL13743.1| beta-lactamase domain protein [Acetohalobium arabaticum DSM 5501] Length = 267 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 57/250 (22%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V+VD G + + +DA+L TH H DHI G+ L ++ + Sbjct: 25 DKKKVLVDAGLSGKRVSERLAEINVDGSELDAILVTHEHGDHIKGVG-----ILSRRFNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA E I I N + + G +E Sbjct: 80 PIYATEKTWAAAKEDLGKI-----------KPEYICIINKE-----GLSLGDLELESFEI 123 Query: 167 QHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + +GF + V+ TD+ E + L+ + +I+++ LK G + Sbjct: 124 PHDAVDPVGFTLRNKNKKVSIATDIGYMTEEIMANLKESNLVILESNHDLEMLKAGPYPW 183 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVD-----LDYDMVLKS-TPSR 256 H S ++ + + + + +L H+ D L + V + Sbjct: 184 SLKKRIMSREGHLSNDDAAATVVELVKNSVERILLAHLSKDNNVPQLAHLTVKNMIVDAG 243 Query: 257 VVPAFDGMQF 266 + D +Q Sbjct: 244 MELGRD-LQL 252 >gi|217969351|ref|YP_002354585.1| beta-lactamase [Thauera sp. MZ1T] gi|217506678|gb|ACK53689.1| beta-lactamase domain protein [Thauera sp. MZ1T] Length = 259 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 93/261 (35%), Gaps = 54/261 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + +LGC S G I G RT +S + + +++D Sbjct: 1 MTEAMKLKVLGC--SGG---IGGAQP----------RT-TSFLL--------DDDILIDC 36 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYAAPDCMKHLF 119 G L E + ID V TH H DHI + + + ++ P+ V+A P+ ++ L Sbjct: 37 GTGVGDLTLDE-LARIDHVFLTHAHLDHIAALPLMIDSVGELRQAPVQVHATPETIRILH 95 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS----AGGVIEAIPILQQHGRISSLG 175 + F L + I + PI + G I A+P + ++ Sbjct: 96 ---SHIFNWLVWPDFSAIPDHHQPFMRFHPIHVGERRDCGGRGITALPARH---TVPAVA 149 Query: 176 FRF----GNVAYCTDVNAFPA--ESLEKLQNLDFLIID-ALKNGLH-----SSHFSLSES 223 +R G + + D P E++ L LI++ A H S H S + Sbjct: 150 YRLDSAHGQLVFSGDTAYCPELIEAINDCPQLRHLILETAFAEEQHGLAVASRHLCPSMA 209 Query: 224 LKKIELIN--PKNAILTHMHV 242 ++ I P+ H+ Sbjct: 210 RAVLDEIRGTPE----IHISH 226 >gi|126179500|ref|YP_001047465.1| ribonuclease Z [Methanoculleus marisnigri JR1] gi|125862294|gb|ABN57483.1| RNAse Z [Methanoculleus marisnigri JR1] Length = 317 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 19/147 (12%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHG 91 P +R S L I R S+ T++ D G Q++R + +++AV TH HADH G Sbjct: 21 PSPQRNPSCLLIRRGSD-----TLLFDCGEGAQQQMMRARTGFTVNAVFITHWHADHFLG 75 Query: 92 IDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + GL F+ + P+ +Y P + F + + T V V+E+ V Sbjct: 76 VFGLVETLAFMGRTDPLPIYGPPWVGE-----FVDLVQRISRHTRGFSVTAHVLEHGSV- 129 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGF 176 HG I LG+ Sbjct: 130 ----VPFNGYTVRAFTTLHG-IPGLGY 151 >gi|297172140|gb|ADI23121.1| metal-dependent hydrolases of the beta-lactamase superfamily III [uncultured gamma proteobacterium HF0770_09E07] Length = 295 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 92/294 (31%), Gaps = 57/294 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ILG G NP R SS + + ++D G Sbjct: 15 TASTKLYILGTGT----------------PNPNPERAGSSYLLLV-----EDKPYLIDFG 53 Query: 62 PDFYMQV----------LREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVY 109 +V L + TH H+DH G+ L + + ++ + ++ Sbjct: 54 SGVVRRVAALTKTWGGDLEIDTEDLKHAFLTHMHSDHNLGLSDLIITPWIMGREHKLVLH 113 Query: 110 AAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 K+L E+F + + T P + + N + + Sbjct: 114 GPKALDNMAKNLIEAFEFDINYRINGTQPQNSSGYKYDFNQIFDGYVYEDNFVRVEAFKN 173 Query: 167 QHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--------- 212 HG + S GF F + + D + L K ++ D LI + Sbjct: 174 SHGDLEESYGFVFQTSHKKIVFSGDTAP-SEKLLLKAKDADILIHEVYSQAGFEEKTPDW 232 Query: 213 --LHSSHFSLSESL-KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H++H + E L + I PK +L+H+ L + + V +DG Sbjct: 233 QIYHAAHHTSPEELGRIASKIKPKKLVLSHI---LFWGSQPEDIKKEVQLFYDG 283 >gi|300023009|ref|YP_003755620.1| coenzyme PQQ biosynthesis protein B [Hyphomicrobium denitrificans ATCC 51888] gi|299524830|gb|ADJ23299.1| coenzyme PQQ biosynthesis protein B [Hyphomicrobium denitrificans ATCC 51888] Length = 310 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 102/324 (31%), Gaps = 82/324 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR--------RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ + + K R R +SSL S + V+++ Sbjct: 5 VLGSSAGGGFPQWNCN----GMQSAKVRSGAAGFKARLQSSLAASSDGKNW----VLLNA 56 Query: 61 GPDFYMQVL-----------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ ++ I AV+ T+ DHI G+ L++ +P +Y Sbjct: 57 SPDIRQQINETPELHPETTGAKRNSPIKAVVVTNADVDHIIGL-----IGLREGQPFSIY 111 Query: 110 AAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + + L + F C + R P P + V + G +EA P+ + Sbjct: 112 GSDLVLATLKANSVFNVCNPEIVPRLELPFDRPTELHGAGVDL-----GLTVEAFPVPGK 166 Query: 168 H-------GRISSLGFRFGN--------------VAYCTDVNAFPAESLEKLQNLDFLII 206 G + G R G+ Y A ++++ D + Sbjct: 167 VALFLEKGGANENYGSRDGDTIGLKVTDRKAGKSFFYIPGCAEVDAPLADRIRGADVIFF 226 Query: 207 DALKNG-----------------LHSSHFSLSESLKKIELINPKNAILTHMHVD---LDY 246 D H S S+ + +N + I H++ LD Sbjct: 227 DGTLYEDGEMIAQGLLNKTGKRMGHISVSGHEGSIAALSHLNVRRKIYVHINNSNPILDE 286 Query: 247 DMVLKSTPS--RVVPAFDGMQFSS 268 + + FDGM+ Sbjct: 287 NSEARKAVETAGWEVGFDGMEVRL 310 >gi|315659968|ref|ZP_07912826.1| metallo-beta-lactamase YycJ [Staphylococcus lugdunensis M23590] gi|315494869|gb|EFU83206.1| metallo-beta-lactamase YycJ [Staphylococcus lugdunensis M23590] Length = 266 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + ++ +L TH H+DHI G+ L +K Sbjct: 22 ESEKGSLLVDVGLTGKKMENLFSQIDR-NISDLNGILVTHEHSDHIKGLG-----VLARK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA K + + P+ + + AG IE+ Sbjct: 76 YHLPIYANEKTWKMIEK----------KDNKIPMEQKFIFNPYE---TKSIAGFDIES-- 120 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD + D + +D L+ Sbjct: 121 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYISDRMKGMIHGSDVFMFESNHDVDMLRMCR 180 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K L+H+ D Sbjct: 181 YPWKTKQRILSDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQD 224 >gi|315573780|gb|EFU85971.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309B] Length = 237 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 37/208 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + P V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLPNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHM 240 H +HF+ E+ + + K +LTH+ Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHL 226 >gi|253682174|ref|ZP_04862971.1| ribonuclease Z [Clostridium botulinum D str. 1873] gi|253561886|gb|EES91338.1| ribonuclease Z [Clostridium botulinum D str. 1873] Length = 311 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 88/304 (28%), Gaps = 91/304 (29%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +G G + P R SSL ++ + ++VD G + Sbjct: 4 LVFIGTGGGMPTPE----------------RNLSSLLLNYKGHK-----ILVDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKHLF 119 + R +ID + TH H DH+ G+ G+ R P+ + +K L Sbjct: 43 SMKIARTGFKNIDIICITHGHGDHVLGLPGILATMGNSGRIEPVTIIGPVGINKIVKGLT 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 Y L P IENN++ + K G I + H + + F Sbjct: 103 VITPYLPYKLKIIESPNEKMFFSIENNNLVLHNK---GEICINTLEVNHSS-PCIAYNFN 158 Query: 179 ----------------------------GNVAY----------------------CTDVN 188 ++ Y TD Sbjct: 159 IKRRPRFDRDKAISQNIPKNLWNVLQKGNDIVYKDILYNSEMVLGEEREGIKISFVTDTT 218 Query: 189 AFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + ++N D L+ + + + + H + S++ + K ILTH Sbjct: 219 PINEL-VSFIKNSDLLVCEGTYGNDKDIDKAVKNKHMTFSQAAMLAKYGKVKELILTHFS 277 Query: 242 VDLD 245 +D Sbjct: 278 TAMD 281 >gi|217977514|ref|YP_002361661.1| beta-lactamase domain protein [Methylocella silvestris BL2] gi|217502890|gb|ACK50299.1| beta-lactamase domain protein [Methylocella silvestris BL2] Length = 263 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 80/269 (29%), Gaps = 37/269 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+G G + G G C + IVD G Sbjct: 1 MKVTIVGSGDAFGT---GGRAHTC------------------FRIDSAAGAAIVDFGASS 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPIDVYAAPDCMKHLF 119 R + IDAV +H H DH G+ L + ++ RP+ + P + L Sbjct: 40 IASWKRLGLSFDQIDAVAISHLHGDHFGGLPFLLLDCQFIERRTRPLLLMGPPGFRERLR 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 ++ F + P +E + G IE ++ G +S G R Sbjct: 100 QACDAFFPGGAKMQWS---FPWRVEEIAPGEPGQLCGFAIETFAVVHSSGS-ASAGVRLS 155 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 + AY D + N D + + + H K+ + K Sbjct: 156 DGKSVFAYSGDTQW-TEALFDISTNADLFLCECYSGDAAVPYHMDWPTLKAKLPRFSAKR 214 Query: 235 AILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 ++THM + A DG Sbjct: 215 IVVTHMSATALARRADME-REGLTVADDG 242 >gi|24652403|ref|NP_724916.1| juvenile hormone-inducible protein 1 [Drosophila melanogaster] gi|21627583|gb|AAM68783.1| juvenile hormone-inducible protein 1 [Drosophila melanogaster] Length = 766 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 97/306 (31%), Gaps = 80/306 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ C P +N SS+ I + V++D G Y Sbjct: 456 KIIFLGTGS-------------CIPNKTRNV---SSILIRTAID----AYVLLDCGEGTY 495 Query: 66 MQVLRE--------QVLSIDAVLYTHPHADHIHGI--------------DGLRGYFLKQK 103 Q++R + + A+ +H HADH G+ D L +Q Sbjct: 496 GQIVRLYGHEKGQLILRQLQAIYVSHLHADHHIGLIGLLRERRQLKPRADPLILLAPRQI 555 Query: 104 RP--------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 P I+ + E + + I V C S Sbjct: 556 EPWLEFYNRQIETVEDAYTLVGNGE----LLASPLSGEQVERLGITSISTCLVRHCPNSF 611 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG-- 212 G + + +H + Y D P + ++ ++ LI +A Sbjct: 612 GISLT---LAAKHNSEPV------KITYSGDT--MPCQDLIDLGRDSTVLIHEATMEDDL 660 Query: 213 ----LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-----RVVPAFDG 263 +H ++S+++++ +N ++ IL+H Y PS RV AFD Sbjct: 661 EEEARLKTHSTVSQAIQQGRNMNARHTILSHFSQR--YAK-CPRLPSDEDMQRVAIAFDN 717 Query: 264 MQFSSP 269 M+ + Sbjct: 718 MEVTVE 723 >gi|88706953|ref|ZP_01104651.1| Beta-lactamase family protein [Congregibacter litoralis KT71] gi|88698764|gb|EAQ95885.1| Beta-lactamase family protein [Congregibacter litoralis KT71] Length = 344 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 80/258 (31%), Gaps = 46/258 (17%) Query: 56 VIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAA 111 ++D G + V +D VL TH H+DHI + ++ + + P+ VY Sbjct: 81 FVIDAGAGSANNLGLAGLPVDRLDGVLLTHFHSDHIADLPTLNVQAWATGHEGPLKVYGP 140 Query: 112 PDCMK-------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P + L + Y + PP V+E + + G + Sbjct: 141 PGVQQVVDGYNMALAQDRVYRSEHHGVSFMPP--EYGVMEPVEHAKEARLEFGELTITAF 198 Query: 165 LQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--- 216 H I ++ +RF +V D + + D L+ DAL + + Sbjct: 199 EADHSPIDPAVSYRFDYQGRSVVITGDTI-VTDRLRTMVDDADLLLTDALSLPIVETIKK 257 Query: 217 --------------------HFSLSESLKKIELINPKNAILTHM----HVDLDYDMVLKS 252 H ++ + K L H+ + ++ + Sbjct: 258 GAEGGGRDRLAHILGDIQDYHAHTEHVIELTKNTGVKMTALYHLVPGPRNKVMENVFKRG 317 Query: 253 TPSRVVPAFDGMQFSSPI 270 +V DGM F P Sbjct: 318 FTDNMVLTHDGMWFELPA 335 >gi|262275118|ref|ZP_06052929.1| coenzyme PQQ synthesis protein B [Grimontia hollisae CIP 101886] gi|262221681|gb|EEY72995.1| coenzyme PQQ synthesis protein B [Grimontia hollisae CIP 101886] Length = 271 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 94/278 (33%), Gaps = 55/278 (19%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQV---------LREQVLSIDAVLYTHPHAD 87 RT+SS+ +S + V+++ PD Q+ + +I AV+ T D Sbjct: 3 RTQSSIAVSDDGDNW----VVINASPDIRQQINASPRLTRVEGARGSAIGAVVVTDAQID 58 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIEN 145 H G+ L++ P+ +Y P+ + L S+ K D V+ E Sbjct: 59 HTTGL-----LILREGLPLALYCTPEVAEELTTSYPILSMMKHWDGGYETHTVDIHSPEG 113 Query: 146 NDVPICMKSAGGVIE-------AIPILQQHGRISSLGFRFGNVA------YCTDVNAFPA 192 +P A + P + ++G + + Y + A A Sbjct: 114 WRIPAVPHLAFHPVSLSSNAPPFSPYRNRARPGDNIGLKIVDTRSGATLFYAPGLGAPEA 173 Query: 193 ESLEKLQNLDFLIIDA--------LKNGLHSS------HFSL---SESLKKIELINPKNA 235 L + D +++D ++ G+ +S H S+ L +E Sbjct: 174 SVLAAMDEADCVMMDGTLWTDDEMIREGVGTSLGSEMGHLSVSGDDGMLALMEGFTKPRK 233 Query: 236 ILTHMHV-----DLDYDMVLKSTPSRVVPAFDGMQFSS 268 +L H++ D D + V AFDGM Sbjct: 234 VLIHINNTNPILDPDSPQHQAVLDAGVEIAFDGMTIEI 271 >gi|289580539|ref|YP_003479005.1| beta-lactamase [Natrialba magadii ATCC 43099] gi|289530092|gb|ADD04443.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 244 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 89/273 (32%), Gaps = 57/273 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H T LG G+++ P R ++ + + +++D G Sbjct: 1 MHVTFLGTGSAM----------------PTGERFQTGILVQ-----NDGRQLLIDCGSGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDC---MKHL 118 ++ + V ++ VL TH H DH+ + L ++V + L Sbjct: 40 LHRLQQSGVGYENVSTVLLTHHHLDHVADLLPLMKARWLAGEEHLEVVGPQGTKGLLDDL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + Y LD + + VP AG + A + L +RF Sbjct: 100 LDVHEYMQDKLD-------LQVREV----VPGEFTVAGFDVSAYETRH---SLPCLAYRF 145 Query: 179 GN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIELINP 232 + + D AF + + L D H + +L L E+ Sbjct: 146 DDRFVFSGDSEAFAGLA-NFAEGAAILAHDCSFPDDVDVSNHPTPETLGRELAGREI--- 201 Query: 233 KNAILTHM--HVDLDYDMVLKSTPSRVVPAFDG 263 LTH+ H + ++ +L+S + +DG Sbjct: 202 GRVYLTHLYPHTEGRHEEMLESIGRQ----YDG 230 >gi|187934495|ref|YP_001886077.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187722648|gb|ACD23869.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 358 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 20/210 (9%) Query: 52 SNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + L++ + +D V+ THPH+DHI G+ + F I Sbjct: 65 DGKNILIDAGNNDSMAYNYLKKLGIKKLDYVMVTHPHSDHIGGMTQIINEF-----DIGE 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + AP H ++F KAL + + + + + Sbjct: 120 FYAPKV-NHTTKTFENMIKALQSKGIK--LTAPTPGDTLNVGNATLQFLAPNSTKYEDMN 176 Query: 169 GRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 + ++GN +Y D A + + LD D LK G H SH S S++ Sbjct: 177 NYSIACKLKYGNTSYVFMGDAEALSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQA--F 232 Query: 227 IELINPKNAILT---HMHVDLDYDMVLKST 253 ++ +NP+ AI++ + + Sbjct: 233 LDKVNPRYAIVSCGKGNDYGHPHQETIDKL 262 >gi|67924306|ref|ZP_00517741.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] gi|67853855|gb|EAM49179.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] Length = 284 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 78/231 (33%), Gaps = 36/231 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + V R +I D G +L E + + +TH H DHI G F+ Sbjct: 34 TCVEMRVGRERLIFDGGTGLRILGDSLLPE-MPVTGHLFFTHSHWDHIQGFPFFAPAFIP 92 Query: 102 QKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + + D +P P+ I ++ A +++ Sbjct: 93 -GNKFHIYGLPAPNGATIKQRLH------DQMLHPNFPVPLQIMQANLEFYDIEAKELVQ 145 Query: 161 AIPILQQHGRI----SSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDA 208 + + GR+ +LG+R + TD FP L ++ + LIID Sbjct: 146 INDVTVETGRLNHPGEALGYRVTYQGLAAVFVTDTEHFPDSLDNNVLHLARDAEVLIIDT 205 Query: 209 --LKNGLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 H H + E++K ++ N K +L H D ++ Sbjct: 206 TYTDEEYHDPKSSKVGWGHSTWQEAVKIAKVANVKKLVL--FHHDPAHNDA 254 >gi|331269855|ref|YP_004396347.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329126405|gb|AEB76350.1| metallo-beta-lactamase family protein, putative [Clostridium botulinum BKT015925] Length = 311 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 90/303 (29%), Gaps = 89/303 (29%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG G + P R SSL ++ + +++D G + Sbjct: 4 LVLLGTGGGMPTPE----------------RNLSSLILNYKGHK-----ILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----------- 111 + R +ID + TH H DH+ G+ G+ R P+ + Sbjct: 43 SMKIARTGFKNIDIICITHGHGDHVLGLPGILATMGNSGRTEPVTIIGPIGMKKIVEGLT 102 Query: 112 ------PDCMKHLFESFRYCF------------------KALDDRTYPPIVNPIVIENND 147 P + + S F L+ P + + Sbjct: 103 VITPYLPYTLNIIESSNEEMFFCIDNNNLILHNQGEICINTLEVNHSSPCIAYNLKIKRR 162 Query: 148 VPICMKSA---------------GGVIEAIPILQQHGRI---SSLGFRFGNVAYCTDVNA 189 ++ A G I IL +H + G R ++ TD Sbjct: 163 PRFHIEKAISKNIPKNLWSILQKGKDIVHEGILYKHEMVLGEEREGIRI---SFVTDTTP 219 Query: 190 FPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + ++N D L+ + + + + H + S++ + N K ILTH Sbjct: 220 INEL-VSFIKNSDLLVCEGTYGNDEDIDKAIKNKHMTFSQAAMLAKKGNVKELILTHFGT 278 Query: 243 DLD 245 +D Sbjct: 279 AMD 281 >gi|187918610|ref|YP_001884173.1| ribonuclease Z [Borrelia hermsii DAH] gi|254808616|sp|B2S197|RNZ_BORHD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|119861458|gb|AAX17253.1| metal-dependent hydrolase [Borrelia hermsii DAH] Length = 319 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 101/331 (30%), Gaps = 91/331 (27%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++ ILG G T P + R +S+ I E + + D G Sbjct: 2 NFNINILGTGG----------------TRPLHNRYLTSVLIEYHGE-----SFLFDCGEA 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGI----------DGLRGYFLKQKRPIDV--Y 109 M + ++++ I + TH HADHI G+ R L PI + Y Sbjct: 41 TQMSLRKQKISWQKIKVICITHLHADHITGLLGIVMLMAQSGDTRKEPLTIIGPIGIKKY 100 Query: 110 AAPDC-MKHLFESFRYCFKALDDRTYPPIVNP------------IVIENNDVPICMKSAG 156 + + + +++ +K + PI+ IE K Sbjct: 101 LDANIELLRVHKNYDIIYKEIIINKTEPILYEDKKKRIEYIKLKHSIECVGYLFIEKDKP 160 Query: 157 GVIE-------------AIPILQQHGRISSLGFRF------------GNVAYCTDVNAFP 191 G LQ+ + G + AY TD F Sbjct: 161 GKFNTQKAESLNIPKGPIRKTLQEGHEVILNGKKILPSEILGESQKGLKFAYITDTAYFE 220 Query: 192 AESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH---- 241 S ++N + +II++ LK+ H + + K + N L H Sbjct: 221 ELS-THIKNFNLVIIESTFKNDLKDEAKKKLHLTAKLAAKITKKANVYQTGLIHFSERYT 279 Query: 242 -----VDLDYDMVLKSTPSR-VVPAFDGMQF 266 +L D + P+ + DGM+ Sbjct: 280 LNKDLCEL-LDEAQQEYPNGEIFLTKDGMRL 309 >gi|33863693|ref|NP_895253.1| hypothetical protein PMT1426 [Prochlorococcus marinus str. MIT 9313] gi|33635276|emb|CAE21601.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 341 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 77/301 (25%), Gaps = 90/301 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 24 LQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRAEL--WLFDCGEGT 64 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V +H H DH+ G+ GL +D+Y +L Sbjct: 65 QHQFLRSDLRLSQLRRVFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGPDPLESYLQG 124 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 R + YP + + + + I H R+ + +R Sbjct: 125 VLR---NSSTRIGYP--LKVHRVRDAAEQNLIVFEDKDILVRCTPLTH-RVPAYAYRVEQ 178 Query: 179 ------------------------------------GNVA----------------YCTD 186 G V +CTD Sbjct: 179 KPKPGHFNLERAQSLGIPPGPVYAALKRGEQVSLDDGRVVDGRDFCGPDRPGASIVFCTD 238 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHM 240 F ++ D LI +A H + + + + +LTH+ Sbjct: 239 TV-FSEAAVSLAAGADLLIHEATFAHSEAEMAYQKQHSTSTMAAQTAAEAGVGKLVLTHL 297 Query: 241 H 241 Sbjct: 298 S 298 >gi|125718370|ref|YP_001035503.1| beta-lactamase superfamily hydrolase [Streptococcus sanguinis SK36] gi|125498287|gb|ABN44953.1| Metal-dependent hydrolase, beta-lactamase superfamily I, putative [Streptococcus sanguinis SK36] Length = 266 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 93/294 (31%), Gaps = 77/294 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI--V 58 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D P+ +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 47 DRKPE-----------DLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKAM 90 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + G ++ H +RF Sbjct: 91 EKDLGKLDASQK---------------HVFELGKTKTFGDLDVESFGVSHDAACPQFYRF 135 Query: 179 ----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SH 217 + TD ++N D +LI I+ L++G + H Sbjct: 136 MKDDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGH 195 Query: 218 FSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 S + + I + K L H+ +L + ++ + + D Sbjct: 196 LSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|324993854|gb|EGC25773.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK405] Length = 266 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 91/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + +++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKINSLLGEI 46 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 47 G---------RKPEDLDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEATWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDIESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|302879403|ref|YP_003847967.1| beta-lactamase domain-containing protein [Gallionella capsiferriformans ES-2] gi|302582192|gb|ADL56203.1| beta-lactamase domain protein [Gallionella capsiferriformans ES-2] Length = 255 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 31/166 (18%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T V++D G + L ++ ++ TH H DHI G+ L ++ I Sbjct: 20 GQTHVLLDCGFGLKDTVARLARLEVTPSQLNGIIVTHEHGDHIGGVARLA-----RQYRI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + F+ ++ E +++ + + G + P Sbjct: 75 PVWLTRGT----HRAQPKAFEKVE-------------ELHEIDVHQCFSIGDLAIQPYPV 117 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + +R + TD + L D L+++ Sbjct: 118 PHDAAEPVQYRLSGGAKQLGVLTDAGCSTPYIEQMLSGCDALVLEC 163 >gi|145222945|ref|YP_001133623.1| beta-lactamase-like protein [Mycobacterium gilvum PYR-GCK] gi|315443408|ref|YP_004076287.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium sp. Spyr1] gi|145215431|gb|ABP44835.1| beta-lactamase-like protein [Mycobacterium gilvum PYR-GCK] gi|315261711|gb|ADT98452.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium sp. Spyr1] Length = 257 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 46/250 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S ++ +++D G Sbjct: 4 RITVLGCSGS----VVGPDSPA------------SGYLVTAPDTPP----LVLDFGGGVL 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHLF 119 + R + VL +H HADH + GL + ++ P VY + L Sbjct: 44 GALQRHADPNSVHVLLSHLHADHCLDLPGL--FVWRRYHPTPAPERGVVYGPANTWARLG 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + + + I + ++ G + +P + H S G R Sbjct: 102 AA-----SSPEGGEIDDFTDIFDIRHWVDAQPVE--IGALTILPRVVCHPT-ESYGMRIT 153 Query: 180 N-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELI 230 + + Y D + + +E ++ D + +A + H S +E+ + Sbjct: 154 DPSGATLVYSGDT-GYCDQLIELARDADVFLCEASWTHSPDRPPRLHLSGTEAGRAAANA 212 Query: 231 NPKNAILTHM 240 +LTH+ Sbjct: 213 GVGELLLTHI 222 >gi|322807891|emb|CBZ05466.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Clostridium botulinum H04402 065] Length = 261 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 82/238 (34%), Gaps = 55/238 (23%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + ++ + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKN-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGVFSKDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKST 253 H S + + I I KN IL H+ +L Y VL + Sbjct: 177 PYTLKRRILSNIGHLSNEDCGRAIINITNNKYKNIILGHLSKTNNFPELAYQTVLNAL 234 >gi|295398003|ref|ZP_06808059.1| ribonuclease Z [Aerococcus viridans ATCC 11563] gi|294973761|gb|EFG49532.1| ribonuclease Z [Aerococcus viridans ATCC 11563] Length = 306 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 88/291 (30%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA GVP + +N +S+ + + E + D G Sbjct: 1 MEITFLGTGA--GVP-----------SRSRNV---TSIMLKLLDESNEM--WMFDCGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL-- 118 Q+++ + + + TH H DHI G+ G Q P+ +Y ++ Sbjct: 43 QHQIMKTTLKPRKVTKIFITHLHGDHIFGLPGFLSSRSHQGGESPVTIYGPKGIKAYIDN 102 Query: 119 --------------------------------------FESFRYCFKALDDRTYPPIVNP 140 Y F+ ++ ++ Sbjct: 103 FLQVTRTTLGYDLIIQELADEGMVFQNDQYQVLYKTLDHAVQSYGFRVIEADQVGELLID 162 Query: 141 IVIENNDVPICMKS---AGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDVNAFPAESLE 196 E + G I Q GR + G++ D + ++ Sbjct: 163 KAREAGVPNGPLLGQLKQGKTITLEDGTQLDGRDFIGPDKKGHIVTILGDT-RYNKNAVA 221 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ DFL+ +A + + H + ++ + + N K +LTH+ Sbjct: 222 LAKDADFLVHEATFAAGEERMARNYYHSTAKQAGQVAKEANVKQLLLTHIS 272 >gi|113867226|ref|YP_725715.1| beta-lactamase superfamily hydrolase [Ralstonia eutropha H16] gi|113526002|emb|CAJ92347.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia eutropha H16] Length = 262 Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 67/216 (31%), Gaps = 60/216 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G S G +SL I E + T V++D G Sbjct: 2 MRFAFLGSG-SEG----------------------NSLLIES-REDTTTTRVLLDCGFGI 37 Query: 65 YM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 ++ R V +DAVL TH H DH+ Y + + VY + Sbjct: 38 RETARRLERLGVAPDQLDAVLVTHEHGDHVG-----SAYAFAARHRLAVYTSHGT----- 87 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPIC---MKSAGGVIEAIPILQQHGRISSLGF 176 + + + DV +C A G ++ +P H L F Sbjct: 88 --------------WLATSHLRGADAADVRVCGADHAFAIGGLQVLPYTVPHDAREPLQF 133 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD +L +D L+++ Sbjct: 134 VLSDGQARLGVLTDAGMETPYVTARLAGVDALVLEC 169 >gi|326202270|ref|ZP_08192139.1| beta-lactamase domain protein [Clostridium papyrosolvens DSM 2782] gi|325987388|gb|EGD48215.1| beta-lactamase domain protein [Clostridium papyrosolvens DSM 2782] Length = 263 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + + E + A+L +H H+DH+ G L +K I Sbjct: 21 EKTKLLIDAGLSGKRILEALCSIGESPAELSAILISHEHSDHVRG-----AGILSRKADI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP-ICMKSAGGVIEAIPIL 165 +YA + + P+ +EN + G I P Sbjct: 76 PIYANESTWCAMETG----------------LGPVKLENKVAFCTGQQFEIGDICVRPFS 119 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +GF F + TD+ E LE + D +++++ LK G + Sbjct: 120 IPHDAAEPVGFNFFAEGKRITTATDIGHMSEELLEYIVGNDLVLLESNHDTEMLKVGPYP 179 Query: 216 -----------SHFSLSESLKKIELINPK---NAILTHMHVDLDYDMVLKST 253 H S + K + + K IL H+ + ++ + T Sbjct: 180 WPLKKRILGDHGHLSNENAAKVVAYLAEKGCTRFILGHLSSENNFPELAYQT 231 >gi|163791324|ref|ZP_02185737.1| metal-dependent hydrolase of the beta-lactamase superfamily III (putative) [Carnobacterium sp. AT7] gi|159873403|gb|EDP67494.1| metal-dependent hydrolase of the beta-lactamase superfamily III (putative) [Carnobacterium sp. AT7] Length = 312 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 59/180 (32%), Gaps = 34/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER NT + D G Sbjct: 1 MELLFLGTGA--GVPA--------------KHRNVTSIALKLLEER--NTIWLFDCGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + +D + TH H DHI G+ G R + P+ +Y Sbjct: 43 QQQILHTTLKPRKVDKIFITHLHGDHIFGLPGFLSSRSFQGGDG-PLTIYGPVGIKN--- 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y L + E + I + + + +HG I S G+R Sbjct: 99 ----YVLTCLKTSGTALKYSLNFHEIVEDGILFEDS--HFKVSCGKLKHG-IQSFGYRIE 151 >gi|323526583|ref|YP_004228736.1| beta-lactamase domain-containing protein [Burkholderia sp. CCGE1001] gi|323383585|gb|ADX55676.1| beta-lactamase domain protein [Burkholderia sp. CCGE1001] Length = 257 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 65/215 (30%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L +DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSAKEVERRLARLGSSAEGLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + ++ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADDADVDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + F N + TDV L D L+++ Sbjct: 111 GDLSVLPYTVPHDAREPLQYVFSNGASRLGVLTDVGTSTPHISAVLSGCDALVLECNHDV 170 Query: 209 -------------LKNGLHSSHFSLSESLKKIELI 230 + G + H + + + + + Sbjct: 171 RMLAGSRYPQSLKARIGGNHGHLNNDAAAEILASL 205 >gi|254385750|ref|ZP_05001071.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194344616|gb|EDX25582.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 231 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 29/199 (14%) Query: 58 VDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVY 109 +D G ++ R + +DA+ +H HADH ID + + R I VY Sbjct: 14 LDMGNGALGELQRHIGLYDLDAIFLSHLHADHC--IDMCAYFVARYYRHEGGRCGTIPVY 71 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 K L ++ D+R+ + + +++ I G + H Sbjct: 72 GPEGTEKRLTTAYE---DVPDERSMSEVFDFRTLKSGSFEI------GPFQVRTEKVCH- 121 Query: 170 RISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLS 221 + + G R ++ Y D P L + D + +A K + H + Sbjct: 122 PVEAYGIRVEHGGRSLTYSGDTGTCPELGL-LAEGTDLFLCEASFTHGKEDIPGLHLNGR 180 Query: 222 ESLKKIELINPKNAILTHM 240 E+ + +LTH+ Sbjct: 181 EAGEYARDSRVGRLLLTHI 199 >gi|163846082|ref|YP_001634126.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222523817|ref|YP_002568287.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667371|gb|ABY33737.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222447696|gb|ACM51962.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 277 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 53/222 (23%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + +++D G + + AVL TH HADH ++ Sbjct: 18 RAGDQALLIDAGVPIRTLTNLLHACDTTPQQVQAVLLTHEHADHAQ-----YALAFARRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + A + L + P ++P +P+ A GV Sbjct: 73 NVPLVAPAATLTAL-----------GESPDPVALDP-------LPVGEYGAIGVFNVQSF 114 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+R +VA D+ ++ AE++ L D ++++A L + Sbjct: 115 RVAHDAADPVGYRIQMAGVSVAIAVDLGSWNAETVTALAKADLIVVEANHARELLPLSPY 174 Query: 215 S-----------SHFSLSESLKKIELI----NPKNAILTHMH 241 H ++ + + + + L H+ Sbjct: 175 PVVVRQRISSPLGHLDNTQCGQLLAQVATHGGIGDVWLAHIS 216 >gi|167646632|ref|YP_001684295.1| ribonuclease Z [Caulobacter sp. K31] gi|167349062|gb|ABZ71797.1| beta-lactamase domain protein [Caulobacter sp. K31] Length = 364 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 82/270 (30%), Gaps = 59/270 (21%) Query: 56 VIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PIDVY 109 +VD G + ++ ++A+ TH H+DHI G+ L P+ VY Sbjct: 84 FVVDAGAGGTKNLSLMNLPPARVEAIFLTHFHSDHIDGLGEL-MLQRWGGGAATSPVPVY 142 Query: 110 AAPDCMKHLFESFRYCFKALDD----RTYPPIVNPIVIENNDVPICMKSAG--------G 157 + F + P ++ P P + AG G Sbjct: 143 GPTGV-DSVVNGFMAAYALDRGYRIAHHGPRVMPPSGFGGAPRPFAIDHAGPNVVLIDDG 201 Query: 158 VIEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEK-LQNLDFLIIDALKN 211 ++ HG + ++G+RF ++ D P+ LE + +D L + L Sbjct: 202 GLKVTAFPVDHGPVEPAVGYRFDYKGRSLVISGDTA--PSARLEATAKGVDLLAHEGLAP 259 Query: 212 G--------------------LH--SSHFSLSESLK-KIELINPKNAILTHMHVDLDYDM 248 H S+ + E+ + + + H+ + ++ Sbjct: 260 DLVAIQHRAAVAAKRDNLAAVTHDIPSYHTAPEAAAGIAQRAGVRYLLFEHIIPPVPFEA 319 Query: 249 VLKST--------PSRVVPAFDGMQFSSPI 270 + V DG S P+ Sbjct: 320 LEGPWLGRSRRIFHGAVRVGRDGDFLSLPV 349 >gi|24379905|ref|NP_721860.1| hypothetical protein SMU.1515 [Streptococcus mutans UA159] gi|24377884|gb|AAN59166.1|AE014984_1 conserved hypothetical protein CovX (VicX) [Streptococcus mutans UA159] Length = 267 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q++ E +V +DA+L TH H DHIHG+ L +K + Sbjct: 25 PQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVG-----VLARKYGL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + V + + + G I+ Sbjct: 80 DVYANAATWQAMDGMIGKI---------------DVSQKHIFDLGKTITFGDIDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +R + TD + ++N D +LI I+ L++G++ Sbjct: 125 SHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLIENADGYLIESNHDIEILRSGIYPW 184 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 H S + + + + K L H+ + Sbjct: 185 SLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKE 225 >gi|322382032|ref|ZP_08055976.1| ribonuclease Z-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154011|gb|EFX46347.1| ribonuclease Z-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 318 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 93/291 (31%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S+ ++ + ERG + + D G Sbjct: 1 MELYFLGTGAGS----------------PAKHRNVTSIVLNLLPERG--SYWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L+ + +D + TH H DH++G+ G+ Q P+ +Y + + Sbjct: 43 QHQILKSPIRLGKVDKIFITHLHGDHLYGLPGVLTSRCYQGGEDPLVLYGPKGIGAFVRQ 102 Query: 121 ---------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI--EAIPILQQHG 169 +++ ++ + +E + ++S G I + +P H Sbjct: 103 VLDISGAQLTYKLRVVEIEHEGNLYEDDRFSVEARRLNHRIESFGYRIVEKDLPGKLDHA 162 Query: 170 RISSLGF----RFGN-----------------------------VAYCTDVNAFPAESLE 196 R+ +LG FG + D P +++ Sbjct: 163 RLKALGVPAGPLFGRLKNGESITLENGQVIHGPDYVGEPVKGRIITILGDTQKTP-NAVK 221 Query: 197 KLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 Q D L+ +A H + ++ + E +LTH+ Sbjct: 222 LAQGADLLVHEATFGAERQDLAGAYGHSTTIDAARTAEEAGVGTLVLTHIS 272 >gi|284051517|ref|ZP_06381727.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca] gi|291569173|dbj|BAI91445.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 302 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 80/227 (35%), Gaps = 34/227 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S + R + +I D G L Q+ + +TH H DHI G F Sbjct: 53 SCLEMRIAGKRLIFDGGTGLRSLGDSLIPQMPMEAYMFFTHYHWDHIQGFPLFTPAFTP- 111 Query: 103 KRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y P + + + F +D +P P+ D+ G + Sbjct: 112 GNCFHIYGTIPPDGESMKKHF------IDRVLHPNSPIPLSGLQADLRFYELKPGDTMML 165 Query: 162 IPILQQHGRI----SSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDAL 209 I + G++ +++G+R V YC+D P +E Q D LI DA+ Sbjct: 166 DDIKIETGQLNHPNTAMGYRVTWQGRTVVYCSDTEHLPDGLDENVVELAQGADILIYDAM 225 Query: 210 --KNGLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDY 246 H+ H + E++K E + K ++ H D + Sbjct: 226 YTDEEYHNPKSPKVGWGHSTWQEAVKIAEAADVKRVVI--FHHDPSH 270 >gi|302917123|ref|XP_003052372.1| hypothetical protein NECHADRAFT_38069 [Nectria haematococca mpVI 77-13-4] gi|256733311|gb|EEU46659.1| hypothetical protein NECHADRAFT_38069 [Nectria haematococca mpVI 77-13-4] Length = 836 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 61/296 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S+ P R S+ I ++D G Sbjct: 546 EIIPLGTGSSI----------------PGKYRNVSATLIRVPG----IGNYLLDCGEGTL 585 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYAAPDCMK 116 Q+ R + + ++ +H HADH G+ ++ ++ + + Sbjct: 586 GQIRRFFGDEETGNILRDMKCIVVSHLHADHHLGVPSFVKAWYEHTLQD----SNAKLAI 641 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-------AGGVIEAIPILQQHG 169 +R + + + + G+ + H Sbjct: 642 SCISRYRNLLEEVSQVEDIGFHRLHFPSCSQSDKFNTGRREVKDDSFGLRSITRVAVPHC 701 Query: 170 RIS-------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +S + G R AY D + E + L+ + L + Sbjct: 702 WLSFATEIELTSGLRI---AYSGDCRPSDDFARE-CEGAHLLVHECTFDDDMLSHAKKKK 757 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 H ++ E+L + + +LTH LK + V+ AFD M+ Sbjct: 758 HSTMGEALSVAHKMKARRTLLTHFSQRYVKSDSLKREDAGEAGEVLMAFDHMRVRL 813 >gi|104783044|ref|YP_609542.1| beta-lactamase-like [Pseudomonas entomophila L48] gi|95112031|emb|CAK16758.1| putative beta-lactamase-like [Pseudomonas entomophila L48] Length = 252 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 78/219 (35%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSASQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ L + P+ + DV G ++ Sbjct: 75 PVYMSQGTLRGLRK---------------PVEVAGFLGCGDV-----LPVGDLQVSATRV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ L + Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVISDGHRRFGMLTDLGSYDYHLLSRYQGLDALLIEANHCRDLLARGHYPN 174 Query: 217 -----------HFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKLRVGGSQGHLNNHQAASLVAELGWQHLQHLVLAHLS 213 >gi|119385092|ref|YP_916148.1| pyrroloquinoline quinone biosynthesis protein PqqB [Paracoccus denitrificans PD1222] gi|119374859|gb|ABL70452.1| coenzyme PQQ biosynthesis protein B [Paracoccus denitrificans PD1222] Length = 296 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 100/310 (32%), Gaps = 64/310 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGP 62 ILG GA GVP+ C+ ++S + +S + +V+ P Sbjct: 1 MRIVILGSGAGGGVPQWNCGCRNCEAARAGRIPAMSQSGIAVSANGRDWA----LVNASP 56 Query: 63 DFYMQV-----LREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D Q+ LR L I +VL T+ DH+ G+ L++ + D++A P Sbjct: 57 DLRQQLAATPALRPGGLRGSPIRSVLVTNGDIDHVAGL-----LTLREGQGFDLFATPAI 111 Query: 115 MKHLFESFRYCFKALDDRTY--------------PPIVNPIVIENNDVPICMKSAGGVIE 160 L + ALD R P +V + VP+ M+ + Sbjct: 112 HAVLAANP--MLAALDPRLVARRELALEESFELAPGLVARLFAVPGKVPLYMEGEQVETD 169 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------- 209 + Q G + R V Y + P E++ D L+ D Sbjct: 170 LMG-EQTVGVELAAEGR--RVFYIPGCASVPDWLCERISGADALLFDGTLWTDDEMVRAG 226 Query: 210 ------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------R 256 + H SL+ + + I H++ +V ++P Sbjct: 227 LGAKTGRRMGHVPVSGPDGSLEGLRDLALGARIYVHLNNSNP--LVDPASPERAMAQAAG 284 Query: 257 VVPAFDGMQF 266 DGM+ Sbjct: 285 WQIGHDGMEI 294 >gi|294501964|ref|YP_003565664.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|295707315|ref|YP_003600390.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] gi|294351901|gb|ADE72230.1| metallo-beta-lactamase family protein [Bacillus megaterium QM B1551] gi|294804974|gb|ADF42040.1| metallo-beta-lactamase family protein [Bacillus megaterium DSM 319] Length = 264 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G + Q + + + +L TH H+DHI G+ L +K Sbjct: 20 SDGEHSLLVDAGLSGKQMEALFQQVNRNIPDLSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++A + I N + I + G +E Sbjct: 75 KLPIFANEKTWNAMDGL---------------IGNINTEQKFHFEIGQTKSFGQLEVESF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F + TD ++N D + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYVFHQGSKKLTLITDTGYVSDRMKGTIKNSDMYVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I K L H+ D Sbjct: 180 PWSIKRRILSDVGHVSNEDAALAMADVIGDQTKRIYLAHLSQD 222 >gi|290580115|ref|YP_003484507.1| hypothetical protein SmuNN2025_0589 [Streptococcus mutans NN2025] gi|254997014|dbj|BAH87615.1| conserved hypothetical protein [Streptococcus mutans NN2025] Length = 267 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q++ E +V +DA+L TH H DHIHG+ L +K + Sbjct: 25 PQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVG-----VLARKYGL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + V + + + G I+ Sbjct: 80 DVYANAATWQAMDGMIGKI---------------DVSQKHIFDLGKTITFGDIDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +R + TD + ++N D +LI I+ L++G++ Sbjct: 125 SHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLIENADGYLIESNHDIEILRSGIYPW 184 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 H S + + + + K L H+ + Sbjct: 185 SLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKE 225 >gi|262193872|ref|YP_003265081.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262077219|gb|ACY13188.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 278 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 78/258 (30%), Gaps = 41/258 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQ---VLREQVLSIDAV-LYTHPHADHIHGIDGLRGYFL 100 S V + V++D G L+ + AV L TH H DHI+G F Sbjct: 29 SCVQLQLGTRQVVLDAGTGIRELGAWFLQNGIRK--AVMLLTHAHWDHINGFPFFAPAFR 86 Query: 101 KQKRPI----DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 K+ + + A+ L P D + + Sbjct: 87 KESELLIMAGSLRASGGVYAALEGQM-----TKPMFPVPLDAMHSDCTFEDFDAGQRFSL 141 Query: 157 GV-IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAF----PAESLEKLQNLDFLIID 207 G IE +L H + G+R ++ Y TD L + D +I D Sbjct: 142 GDGIEVQTVLLNHPS-GATGYRIEYGGKSLCYVTDTEHVRGQRDKNILRLIDGADLVIYD 200 Query: 208 ------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY--------DMVLKST 253 + + H + E ++ K ++ H D ++ + Sbjct: 201 STYTDETFEPKIGWGHSTWQEGVRLCREAKAKRLVI--FHHDPEHTDDIMAAIEKRASEE 258 Query: 254 PSRVVPAFDGMQFSSPIP 271 S + A +GM+ P Sbjct: 259 WSETIVAREGMRIDLLDP 276 >gi|251778134|ref|ZP_04821054.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082449|gb|EES48339.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 351 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 17/190 (8%) Query: 52 SNTTVIVDTGPD--FYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + V++D G + + L+ + + +D V+ THPH DHI G+ + + Sbjct: 65 GDKNVLIDAGCNDNKALNYLKSQGISKLDCVIATHPHEDHIGGMTS----VINNFEVGEF 120 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA H +F KAL + + M+ L + Sbjct: 121 YAPKVT--HTTRTFENMIKALQSKGLKITTKNVGDALTIGNATMQFLAPNSSIYQDLNNY 178 Query: 169 GRISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 + L ++GN +Y D + + + LD D LK G H SH S S++ Sbjct: 179 SIVIRL--KYGNTSYLFTGDAESLSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQA--F 232 Query: 227 IELINPKNAI 236 ++ +NP+ AI Sbjct: 233 LDKVNPQYAI 242 >gi|73661334|ref|YP_300115.1| putative metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72493849|dbj|BAE17170.1| putative metal-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 263 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q + +Q+ +++ +L TH H+DHI G+ L +K Sbjct: 19 ESDKGSILVDAGLTGKKMEELFGQ-IDKQIQNLNGILVTHEHSDHIKGLG-----VLARK 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +YA + + + P+ + + AG IE+ Sbjct: 73 YKLPIYANEKTWTAIEK----------KDSKIPMDQKFIFNPYE---TKSLAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 118 FNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIQGSDAFVFESNHDVDMLRMCG 177 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + + + K L+H+ D Sbjct: 178 YPWKTKQRILSDMGHVSNEDAGRAMTDVITGSTKRIYLSHLSQD 221 >gi|87119037|ref|ZP_01074935.1| hypothetical protein MED121_12245 [Marinomonas sp. MED121] gi|86165428|gb|EAQ66695.1| hypothetical protein MED121_12245 [Marinomonas sp. MED121] Length = 313 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 96/290 (33%), Gaps = 93/290 (32%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TI+G G+ P D R +S+ IS + + +++D G Sbjct: 30 TIVGSGS----PVFNQD------------RASASVLISNGTHK-----ILIDMGNGTQAN 68 Query: 68 VLREQV--LSIDAVLYTHPHADH--------IHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 + + +V ++DA+L+TH H DH +H + + F +Y + K Sbjct: 69 LAKLKVSDKTLDALLFTHHHLDHNEEFLPILVHSLLLGKQDFF-------IYGPSNT-KK 120 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENN-----DVPICMKSAGGVIEAIPILQQHGRIS 172 + +SF FK + + N D+ G I+ + H I Sbjct: 121 MTQSFINLFKEDINYRLSKSKRSLTDRENSYLVKDLKGGEVFNIGDIKVSTLSVPH-TID 179 Query: 173 SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID--------------- 207 ++ +RF G++ Y + + +D+LIID Sbjct: 180 AIAYRFDYQGESILVTGDLTYT-------DQLAPFAKGVDYLIIDSGGMQMTLVNNRKVK 232 Query: 208 ----------------ALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +NG +H +L+ES KN + TH Sbjct: 233 KSKTKQVNQRVRKAGKTSRNGRVIAHLNLAESSLIAANAGVKNLVYTHFS 282 >gi|328956409|ref|YP_004373795.1| putative metallo-hydrolase [Carnobacterium sp. 17-4] gi|328672733|gb|AEB28779.1| putative metallo-hydrolase [Carnobacterium sp. 17-4] Length = 270 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 72/224 (32%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD+G ++ + V +D +L TH H DH+HG+ L +K Sbjct: 26 ESEKKKILVDSGLSGKKITELLKKIDRDVADLDGILVTHEHRDHVHGVG-----VLARKY 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIP 163 +DVYA + + PI+ I E + G I+ Sbjct: 81 HLDVYANEQTWEAMT----------------PIIGTIKTEQKYLFEMGKTMTIGDIDVES 124 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGL 213 H I+ + F TD + N D +L ++ L+ G Sbjct: 125 FGVSHDAIAPQFYSFHKDNKCFVMLTDTGYVSDRMRGIVSNADAYLFESNHDLEMLRMGN 184 Query: 214 HSSHF------------SLSESLKKIELIN--PKNAILTHMHVD 243 + H + +L E+I K L H+ D Sbjct: 185 YPWHLKQRILGDKGHLSNEDGALALAEIIGDATKRVYLGHLSKD 228 >gi|209558751|ref|YP_002285223.1| hypothetical protein Spy49_0184 [Streptococcus pyogenes NZ131] gi|209539952|gb|ACI60528.1| hypothetical protein Spy49_0184 [Streptococcus pyogenes NZ131] Length = 259 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRNEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|209527278|ref|ZP_03275788.1| beta-lactamase domain protein [Arthrospira maxima CS-328] gi|209492266|gb|EDZ92611.1| beta-lactamase domain protein [Arthrospira maxima CS-328] Length = 302 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 34/227 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S + R + +I D G L Q+ + +TH H DHI G F Sbjct: 53 SCLEMRIAGKRLIFDGGTGLRSLGDSLVAQMPMEAYMFFTHYHWDHIQGFPLFTPAFTP- 111 Query: 103 KRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y P + + + F +D +P P+ D+ G + Sbjct: 112 GNCFHIYGTIPPDGESMKKHF------IDRVLHPNSPIPLSGLQADLRFYELKPGDTMML 165 Query: 162 IPILQQHGRI----SSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDAL 209 I + G++ +++G+R V YC+D P LE Q D LI DA+ Sbjct: 166 DDIKIETGQLNHPNTAMGYRVTWQGRTVVYCSDTEHLPDGLDENVLELAQGADILIYDAM 225 Query: 210 --KNGLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDY 246 H+ H + E++K E + ++ H D + Sbjct: 226 YTDEEYHNPKSPKVGWGHSTWQEAVKIAEAADVARVVI--FHHDPSH 270 >gi|207725118|ref|YP_002255515.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein [Ralstonia solanacearum MolK2] gi|206590350|emb|CAQ37311.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein [Ralstonia solanacearum MolK2] Length = 321 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 81/264 (30%), Gaps = 51/264 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 44 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 83 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHL--- 118 Q + + +I V TH H+DH G L + P+D + P Sbjct: 84 RQYVSAGLKLKAIRHVFITHQHSDHNADYGALMLLAWGTDLTGPVDTWGPPPLAAMTTKF 143 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 E + Y + P + P++ + + ++ L +H + + +R Sbjct: 144 LELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYR 203 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLHS 215 F ++ D + D L+ +D L+ L + Sbjct: 204 FDAADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTERNAKTLREHLLA 262 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 SH E + K +L+H Sbjct: 263 SHTPAEEVGRIATEAKVKTLVLSH 286 >gi|119504757|ref|ZP_01626835.1| putative hydrolase [marine gamma proteobacterium HTCC2080] gi|119459362|gb|EAW40459.1| putative hydrolase [marine gamma proteobacterium HTCC2080] Length = 299 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 92/305 (30%), Gaps = 82/305 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G + P NR ++ + + IVD GP Sbjct: 20 RTQVVMLGTGTPIPTP---------------NRSGPATAIVV------NGKAYIVDFGPG 58 Query: 64 FYMQVL-----------REQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYA 110 + V + TH H DH G+ L + ++ ++Y Sbjct: 59 VVRRAAEVSKEYGGPINALNVDQLGIAFLTHLHHDHSAGLPDLVYTSWTHGRENAFELYG 118 Query: 111 APDC-------MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 P + E RY L+ P + I +++ + + Sbjct: 119 PPGTAAMASNVAEAWQEDNRYRLYGLE----PATPSGWKINAHEIEEGVVYRDERVTVEA 174 Query: 164 ILQQHGRIS-SLGFRF----------GNVAYCTDVNAFPAESLEKLQ-NLDFLIID---- 207 + +HG + ++F G+ AY LE + D LI + Sbjct: 175 LKVKHGTWPNAFAYKFTTPDKVIVISGDAAY--------DPKLEAMATGADILIHEVVSE 226 Query: 208 -ALKNGL------HSS-HFSLSESLKKIELINPKNAILTH-MHVDLDYDMVLKSTPSRVV 258 AL H S H + E PK IL H + L+ + VL+ SR Sbjct: 227 AALNQRSEFWQNYHRSNHTTSYELAALASRAKPKQLILYHVLVFGLEDETVLQEVKSR-- 284 Query: 259 PAFDG 263 +DG Sbjct: 285 --YDG 287 >gi|269962941|ref|ZP_06177279.1| hypothetical protein VME_36630 [Vibrio harveyi 1DA3] gi|269832303|gb|EEZ86424.1| hypothetical protein VME_36630 [Vibrio harveyi 1DA3] Length = 329 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 46/210 (21%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + LG S GVP K+R ++ + + ++D Sbjct: 1 MGSHMELYFLGT--SSGVPT-------------KSRNVSATALLESKGKGW----FLIDC 41 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+L + + A+ TH H DH +G+ GL +K P+ + A + Sbjct: 42 GEATQHQLLHTPLSLNYLRAICITHIHGDHCYGLPGLLASAGMNNRKDPLTIIAP----E 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + F + + + P + +V G H Sbjct: 98 GIKQWFE------ATQAFTKLYLPFELHFIEVEQFDSIEIGQFTITATALSH-------- 143 Query: 177 RFGNVAYCTDVNAF---PAESLEKLQNLDF 203 R + AYC + + P ++KL+ L+ Sbjct: 144 RVPSFAYCFEESTIRMYPD--IDKLEQLNI 171 >gi|297587564|ref|ZP_06946208.1| beta-lactamase [Finegoldia magna ATCC 53516] gi|297574253|gb|EFH92973.1| beta-lactamase [Finegoldia magna ATCC 53516] Length = 277 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 35/179 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ +++D G + ++ + +DA+ TH HADHI GI L ++ + Sbjct: 22 EHSKILIDAGFSGKTIENLLKYINVDPSKLDAIFVTHEHADHIKGIG-----VLSRRYDL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + A + + D Y V ENN ++ +PI Sbjct: 77 PIIANAETWYAMDNKIGKI---NDKNIY-------VFENNR-----HINFKDLDILPIKT 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +S G+ ++ TD E++++ + I+A LK G + Sbjct: 122 SHDSANSCGYVISKDDKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDVDMLKYGSYP 180 >gi|119505318|ref|ZP_01627392.1| ribonuclease Z [marine gamma proteobacterium HTCC2080] gi|119458773|gb|EAW39874.1| ribonuclease Z [marine gamma proteobacterium HTCC2080] Length = 346 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 17/168 (10%) Query: 57 IVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP 112 ++D+G + +LR +D +L TH H+DHI I + + + P+ V+ Sbjct: 83 LIDSGVGSTDNINLLRLPTARLDGLLLTHFHSDHIAEIYEVNLGSWVNGRPAPLKVWGPR 142 Query: 113 DCMKHL-------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + + Y + P + + E + + ++ G ++ + Sbjct: 143 GVDEVVSAVNAGYRQDRIYRVGHHGEDLLQPALGVLAHETIEPGVVLQD--GELKITAYV 200 Query: 166 QQHGRI-SSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 +H I ++G+RF G + + +L+ + D L+ DAL Sbjct: 201 GEHPPIEPAVGYRFDYRGRSVVISGDSNVNENTLKIAEGADLLLHDAL 248 >gi|119477024|ref|ZP_01617305.1| Beta-lactamase-like protein [marine gamma proteobacterium HTCC2143] gi|119449831|gb|EAW31068.1| Beta-lactamase-like protein [marine gamma proteobacterium HTCC2143] Length = 254 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 57/223 (25%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +N +++D G + + Q IDA+L TH H+DHI G+ + K + Sbjct: 20 KSANALLLIDCGFTIKETERRLHNMGHQPQDIDAILVTHEHSDHIKGVG---PFARKYQ- 75 Query: 105 PIDVYAAPDC--MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY L + + + + G IE Sbjct: 76 -LPVYLTHGTGQYDGLKK---------------------ITRMHHINTHRPFFIGDIEVT 113 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNG 212 P+ H F F TD+ + E+ + D L+++ L G Sbjct: 114 PVTVPHDAREPCQFVFRHDNKTAGVLTDLGSITPHVAEQYRRCDALMLECNHCSEMLSMG 173 Query: 213 LHS-----------SHFSLSESLKKIELINP---KNAILTHMH 241 + H + ++ + I ++ +++H+ Sbjct: 174 PYPMSLKQRVGGNWGHLNNHQAANLLSEIEVDQLQHLVISHVS 216 >gi|239816031|ref|YP_002944941.1| pyrroloquinoline quinone biosynthesis protein PqqB [Variovorax paradoxus S110] gi|239802608|gb|ACS19675.1| coenzyme PQQ biosynthesis protein B [Variovorax paradoxus S110] Length = 307 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 96/321 (29%), Gaps = 71/321 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVI 57 T+LG A G P+ + C P RT+SS+ + V+ Sbjct: 1 MRITVLGSAAGGGFPQWNCNCPNCAGVRSGTVRAKP---RTQSSIFVR---PDEGEDGVL 54 Query: 58 VDTGPDFYMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + PD Q+ + +I V+ DH G+ LR ++ P+ + Sbjct: 55 FNASPDILEQIRSSPILQPARAMRDTAIAGVVLIDGQVDHATGLFMLR----ERGTPLPL 110 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI---- 164 + + L E Y + + + G V A+ + Sbjct: 111 WCTDPVAEDLSEGNP---VLRVLSHYCGVARHAITPGGNSFEVPGVPGLVFRAMALTGKA 167 Query: 165 --LQQHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 H G G ++ Y + A + + + D +++D Sbjct: 168 APYSPHREQQVPGDNIGVTILDRRSGKSLFYAPGLGAITPPVFDAMASADAVMVDGTFWT 227 Query: 209 ----LKNGLHSSHF----SLSES-----LKKIELI---NPKNAILTHMHV-----DLDYD 247 ++ G+ S L +S ++ + + + L H++ D D D Sbjct: 228 DDEMVRLGVSSKRAREIGHLPQSGEGGMIEWLSKLPATTARRM-LIHINNTNPILDEDSD 286 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + + P DGM Sbjct: 287 EHAALRRAGIEPCEDGMTIQL 307 >gi|73540808|ref|YP_295328.1| Beta-lactamase-like [Ralstonia eutropha JMP134] gi|72118221|gb|AAZ60484.1| Beta-lactamase-like [Ralstonia eutropha JMP134] Length = 262 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 66/213 (30%), Gaps = 54/213 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G S G +SL + E + T +++D G Sbjct: 2 MRFAFLGSG-SEG----------------------NSLLVES-REGTTTTRILLDCGFGI 37 Query: 65 YM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 ++ R V +DAVL TH H DH+ Y + I VY + Sbjct: 38 RETARRLERLGVTPDQLDAVLVTHEHGDHVG-----SAYPFAARHDIAVYTSHGTWLATQ 92 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + V + V + G ++ +P H L F Sbjct: 93 HM-----------RGAALADVRVCGADHV-----FSIGGLQVLPYTVPHDAREPLQFVLS 136 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD+ +L +D L+++ Sbjct: 137 DGDARLGVLTDIGMETPYVTARLSGVDALVLEC 169 >gi|329298341|ref|ZP_08255677.1| carbon-phosphorus lyase complex accessory protein [Plautia stali symbiont] Length = 67 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%) Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +H ++ +L + + P+ A L H+ ++D ++ + P V FDG Q + Sbjct: 6 RNHNDVTRALHIVARLAPRQAWLVHLSHEIDNWLLDNALPENVSVPFDGQQIAV 59 >gi|15674406|ref|NP_268580.1| hypothetical protein SPy_0208 [Streptococcus pyogenes M1 GAS] gi|71909992|ref|YP_281542.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|13621498|gb|AAK33301.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|71852774|gb|AAZ50797.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS5005] Length = 259 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRNEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 SFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|313906064|ref|ZP_07839416.1| ribonuclease Z [Eubacterium cellulosolvens 6] gi|313469109|gb|EFR64459.1| ribonuclease Z [Eubacterium cellulosolvens 6] Length = 265 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 22/139 (15%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +D + TH H DHI G+ L ++ I +YA ++++ ES + C K + Sbjct: 47 SDLDGIFVTHEHLDHIKGLG-----VLARRHGIPIYATKGTLEYI-ESHKSCGKIPEGL- 99 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNA 189 +++ G + P H +G+ + A TD+ Sbjct: 100 -----------YHEIKADCPVTIGDMTIEPFRISHDAAEPVGYHLSSEGRTAAIATDMGT 148 Query: 190 FPAESLEKLQNLDFLIIDA 208 + ++ LQNLD L+++A Sbjct: 149 YTDYTIRHLQNLDVLLLEA 167 >gi|311113411|ref|YP_003984633.1| beta-lactamase superfamily hydrolase [Rothia dentocariosa ATCC 17931] gi|310944905|gb|ADP41199.1| beta-lactamase superfamily hydrolase [Rothia dentocariosa ATCC 17931] Length = 295 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 84/282 (29%), Gaps = 57/282 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S + A S +S G V++D G Sbjct: 1 MRLTIIGCTGSF----PGPNSPA------------SCYLLSATDYAGHTWRVLMDMGNGS 44 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHL 118 + R + IDA+L +H H DH + GL K I +Y ++L Sbjct: 45 LGVLQRYIDLAEIDAILISHLHPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGPAAINEYL 104 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + E + K G P H R Sbjct: 105 SATHG--LDPDPGMS-------TEFEYHTWDEGHKVEIGPFTVEPFRVLHPAKDPYALRI 155 Query: 179 ------GN--VAYCTDVNAFPAESLEKLQNLDFLII---------DALKNGLHSSHFSLS 221 G AY D + ++ + D + DAL+ H + Sbjct: 156 TCNSRDGRTLFAYSGDTDTC-DGLIKAARGADLFLCEAAYQEGRDDALRGI----HLTGK 210 Query: 222 ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + + + +N +LTH+ V D D+ S AFDG Sbjct: 211 RAGEAAQEAGVRNLLLTHLPVWNDPDIARTEAQS----AFDG 248 >gi|56459703|ref|YP_154984.1| cAMP phosphodiesterase [Idiomarina loihiensis L2TR] gi|56178713|gb|AAV81435.1| Possible cAMP phosphodiesterase, metallo-beta-lactamase superfamily [Idiomarina loihiensis L2TR] Length = 220 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 78/226 (34%), Gaps = 38/226 (16%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCM 115 ++D G Q+ Q+ + V TH H DHI + + P+ VYA + Sbjct: 1 MIDAGTGL-NQLSLAQMHQVRHVFLTHSHMDHIAALPTFLSNQYGSEHLPVTVYAQAHTL 59 Query: 116 KHLFESFRYCFKALD-------DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + L + F PI+ I + C++ G I+A + Sbjct: 60 EKLQNN---IFNGDIWPELSSMTEGPEPILKFRKIHPGE---CIELEGLEIKAFAVEH-- 111 Query: 169 GRISSLGFRFGN----VAYCTDV---NAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 + ++G+ N + D + L +L ++D L+++ L + Sbjct: 112 -SVPTVGYSVKNQGKHFVFAADTIAGKQLTEQ-LNRLGHIDTLMLECAFPDELLHVAEKT 169 Query: 216 SHFS---LSESLKKIELINPKNAILTHM--HVDLDYDMVLKSTPSR 256 H + L +L +E P +TH+ + L + P Sbjct: 170 KHMTPALLQSALNSLEQ-QPAELWVTHLKPSNEKALRATLAANPPH 214 >gi|242240577|ref|YP_002988758.1| beta-lactamase superfamily hydrolase [Dickeya dadantii Ech703] gi|242132634|gb|ACS86936.1| beta-lactamase superfamily hydrolase [Dickeya dadantii Ech703] Length = 255 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 77/237 (32%), Gaps = 41/237 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G + RR ++++++ ++++D GP Sbjct: 1 MELDILGSGEAY-----------------DRRRVNAAIRVTEAG-----FSLLIDCGPTV 38 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFE 120 + + ++ IDAV +TH H DH G+ + + P+ + A L + Sbjct: 39 PPALWQRRLTADDIDAVYFTHCHPDHALGLTTWLNWCESCGRTAPLRIIAPRRQRPQLQQ 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---RISSLGFR 177 + F +P ++ + E + G + +H R L R Sbjct: 99 LADFAFWPTAKPLFP--IDWLESETL-------TQLGPWQCRTAATRHSVPNRALWLRGR 149 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINP 232 G++ Y D E+ + D +++ L + H + + Sbjct: 150 QGSLFYSGD-GQLTPEAAALMAQADLALVECFSLSEDPNPYHGNWPLTQTLSRKAGA 205 >gi|305662987|ref|YP_003859275.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] gi|304377556|gb|ADM27395.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] Length = 250 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 30/218 (13%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLR 96 +S+ + +T++++D G Y ++LRE + + ++ TH H DHI G+ Sbjct: 23 TSILVV-----SRDTSILLDAGECVY-RMLREFGVDICGVSNIVVTHRHGDHILGLPTYI 76 Query: 97 GYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + +++Y+ D + + + + + I+ + + + Sbjct: 77 QMYRWSGCRDTLNIYSLNDVISSIKHFLDFVGVDIQRS------DARFIDIEERSLSI-- 128 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 G + + H I S+ + + + Y D F + +E + D LI +A Sbjct: 129 --GDLYIEAMRTCHS-IPSIAVKVCDENKCIVYTGDT-RFCEKLVEFSRGCDILIHEASG 184 Query: 211 NGLH---SSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + H +L E++ + K I H + D+ Sbjct: 185 YEENAGLYGHSNLYEAIDIAVKASVKMFIPIHFYRDIP 222 >gi|119871919|ref|YP_929926.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|166991503|sp|A1RRK1|RNZ_PYRIL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|119673327|gb|ABL87583.1| RNAse Z [Pyrobaculum islandicum DSM 4184] Length = 287 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 90/295 (30%), Gaps = 68/295 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ PK+ R ++ + V++D G Sbjct: 4 LKLVFLGTGGAV----------------PKSDRMLPTIYLE----DWLGHRVLLDAGEGA 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES- 121 ++L+ V S+ V TH H DH G+ GL + V AP M + E Sbjct: 44 QYRLLQIDVSPASLTLVAITHQHEDHTLGLPGLVITNKFLGGKLKV-LAPRSMHKILERL 102 Query: 122 ------------------------------FRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 F++ D + + + N Sbjct: 103 GVEVSDSYEEGRFKITCVEVCHTVDACGWLFQWDVGYKLDLSKVAGLPKWALTNLIRGEA 162 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-- 209 +K G +I + + RF + Y D P + + +D LI +A Sbjct: 163 VKVGGRLITPEEVADLTHK------RFRRLLYTGDTAPCPQ-MWKTVGEVDVLIHEATFA 215 Query: 210 -----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H +++++++ + + ILTH+ K+ V P Sbjct: 216 DDVEPQKAHDEGHSTVADAVEAAKTLKADVLILTHISARYPSKERHKALADAVKP 270 >gi|189034166|gb|ACD75088.1| ribonuclease Z [Enterobacter cloacae] Length = 305 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 40/183 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLDLQHPTRGGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMK 116 Q+L +D + TH H DH+ G+ GL + P+ +Y + Sbjct: 42 GTQHQLLHTAYHPGKLDKIFITHLHGDHLFGLPGL--LCSRSMAGNANPLTIYGPAGTAE 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + R D YP +E ++ + G H + G+ Sbjct: 100 FVETTLRLSGSWTD---YP-------LEVIEITEGLVLDDGDYTVTARPLNH-PVECYGY 148 Query: 177 RFG 179 R Sbjct: 149 RIE 151 >gi|119897478|ref|YP_932691.1| pyrroloquinoline quinone biosynthesis protein PqqB [Azoarcus sp. BH72] gi|166989869|sp|A1K4P9|PQQB_AZOSB RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|119669891|emb|CAL93804.1| probable coenzyme PQQ synthesis protein B [Azoarcus sp. BH72] Length = 304 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 93/313 (29%), Gaps = 58/313 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + CD R R+ + S V+ + PD Sbjct: 1 MKVRVLGSAAGGGFPQWNCNCPNCDGLRRGTVRARARTQSSIAVTGDDENWVLFNASPDV 60 Query: 65 YMQVLREQV----------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 Q LRE +I A++ DH G+ LR + ++P ++ Sbjct: 61 LQQ-LREAPELQPARALRDTAIRAIVLIDAQIDHTTGLLMLR----EHRQPHALWCTAPV 115 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--- 171 + L F L ++ I G A+P+ Sbjct: 116 REDLSTGNP-LFGVLGHYCG---LDLNEIPLQGGFDIAGVPGVGFAALPLTSNAPPYSPR 171 Query: 172 ---SSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA--------LK 210 G G + Y + +Q D +++D ++ Sbjct: 172 RDKPVPGDNIGVTLTDTRSGRRLFYAPGLGEMEPHVWAAMQAADCVLVDGTLWTDDEMIR 231 Query: 211 NGLHSSHF----SLSES-----LKKIELINP-KNAILTHMHVD---LDYDM-VLKSTPSR 256 G S L +S L+ ++ + +L H++ LD D + Sbjct: 232 LGASSKTSRAMGHLPQSGPGGMLEWLDRLPASTRKVLIHINNTNPILDEDSPQRAELAAH 291 Query: 257 -VVPAFDGMQFSS 268 V A+DGM S Sbjct: 292 GVEVAWDGMVLSL 304 >gi|111018438|ref|YP_701410.1| hypothetical protein RHA1_ro01434 [Rhodococcus jostii RHA1] gi|110817968|gb|ABG93252.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 255 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 42/249 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S+ P D +S + + +++D GP Sbjct: 4 MRITVLGCSGSVSGP---------DS--------PASGYLLTAPDTPP---LVLDFGPGV 43 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAAPDCMKHLFE 120 + R +VL +H HADH + GL + P VY D + + Sbjct: 44 LGALQRFADPGEVSVLLSHLHADHCLDLPGLLVWRRYHPHPPKGRALVYGPSDTARRIGV 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + C +DD + ++ + V G + H + GFR N Sbjct: 104 ASAECGGDIDDISDTIDLH-HWTDGEPVTF------GDLTITARRVNHPP-EAYGFRLTN 155 Query: 181 -----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELIN 231 + Y D E ++ + D L+ +A + H S +E+ + Sbjct: 156 GAGRTLVYTGDT-GMCEEVIDLARGADVLLAEASWTHSPDRPEGIHLSGTEAGQVAHRAG 214 Query: 232 PKNAILTHM 240 +LTH+ Sbjct: 215 VAELLLTHI 223 >gi|148381506|ref|YP_001256047.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 3502] gi|153932765|ref|YP_001385881.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937263|ref|YP_001389288.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|148290990|emb|CAL85126.1| putative metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152928809|gb|ABS34309.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933177|gb|ABS38676.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] Length = 261 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 50/208 (24%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + + ++E SI+ + TH H DHI G+ L +K Sbjct: 18 SSEKSKILIDAGLSGKSIELALDRIKESPSSINGIFVTHEHIDHIKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + +S + IE D + +E P Sbjct: 73 DIPIYANAKTWHAMKKS-------------VGKIKEHNIEILDGKSVV---LNDMEINPF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G+ + TD+ F + L++ D +++++ LK G + Sbjct: 117 AISHDAASPFGYTICSKNKKASIATDLGVFSRDIQNILEDCDVVLLESNHDTEMLKFGPY 176 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHV 242 ++L K IL+++ Sbjct: 177 P--YTL------------KRRILSNIGH 190 >gi|146342629|ref|YP_001207677.1| pyrroloquinoline quinone biosynthesis protein PqqB [Bradyrhizobium sp. ORS278] gi|146195435|emb|CAL79460.1| pyrroloquinoline quinone biosynthesis protein B (Coenzyme PQQ synthesis protein B/G) [Bradyrhizobium sp. ORS278] Length = 309 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 59/175 (33%), Gaps = 26/175 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN---PKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG A GVP+ C P+ +++S+ +S +++ Sbjct: 2 LRLVVLGAAAGGGVPQWNCGCAVCRAARTSHPEICNSQASVAVSADGANW----FLINAS 57 Query: 62 PDFYMQVLREQVLS----------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD QV R L I V+ T+ D I G+ +R + P ++A Sbjct: 58 PDLRQQVTRAPQLHPKPGALRHSPIAGVILTNGEIDAITGLLSMR-----ESSPFSIHAH 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 P + L + F L + + PIVI+ P +E Sbjct: 113 PKVLAILRSNN--IFDVLKEENVKRV--PIVIDVPFRPQLQDGGPSGLEITAFAV 163 >gi|229494017|ref|ZP_04387786.1| metal-dependent hydrolase of the beta-lactamase family protein III [Rhodococcus erythropolis SK121] gi|229319086|gb|EEN84938.1| metal-dependent hydrolase of the beta-lactamase family protein III [Rhodococcus erythropolis SK121] Length = 255 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 79/251 (31%), Gaps = 46/251 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S ++ +++D GP Sbjct: 4 MRMTVLGCSGS----VTGPDSPA------------SGYLLTAPGTPP----LVIDFGPGV 43 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHL 118 + R +L +H HADH + GL ++ P VY D + Sbjct: 44 LGALQRYADPGEVTILLSHLHADHCLDMPGL--LVWRRYHPNPPVGRALVYGPTDTACRI 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S C +DD + V EN V G + + H + GFR Sbjct: 102 GVSSAECAGEMDDISDTIDVQLWA-ENEPVTF------GELSVVARRMNHPP-EAYGFRI 153 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIEL 229 + Y D +E + D L+ +A + H S E+ + L Sbjct: 154 TGADGRVLVYTGDT-GMCDNVVELARGADVLLSEASWTDSPDRPEGVHLSGKEAGRVAAL 212 Query: 230 INPKNAILTHM 240 K +LTH+ Sbjct: 213 AGVKELLLTHI 223 >gi|158335800|ref|YP_001516974.1| metallo-beta-lactamase superfamily protein [Acaryochloris marina MBIC11017] gi|158306041|gb|ABW27658.1| metallo-beta-lactamase superfamily protein [Acaryochloris marina MBIC11017] Length = 302 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 71/230 (30%), Gaps = 36/230 (15%) Query: 46 RVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V + + I D G ++L+ + + ++H H DHI G F+ Sbjct: 32 CVEVQAGHQKFIFDGGTGLRVLGQEMLKH-LPVEAHIFFSHTHWDHIQGFPFFSPAFMP- 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG----- 157 +Y E + D +P P+ I + AG Sbjct: 90 GNRFHIYGTRGSDGKTIEK-----RLTDQMLHPNFPVPLQIMGGSLDFYDLEAGQIVEVE 144 Query: 158 VIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAE----SLEKLQNLDFLIIDAL 209 I + H S+G+R V+Y TD FP L LI DA Sbjct: 145 DITIRNAILNHPG-GSIGYRLEWQGLTVSYITDTEHFPDALDPNVLALADQAHVLIYDAT 203 Query: 210 KN--GLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 H + H + E++K + +L H D ++ V Sbjct: 204 YTDAEYHEAGNSKVGWGHSTWQEAIKIAKAAKVDQLVL--FHHDPLHNDV 251 >gi|187929566|ref|YP_001900053.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ralstonia pickettii 12J] gi|309781655|ref|ZP_07676389.1| coenzyme PQQ biosynthesis protein B [Ralstonia sp. 5_7_47FAA] gi|187726456|gb|ACD27621.1| coenzyme PQQ biosynthesis protein B [Ralstonia pickettii 12J] gi|308919630|gb|EFP65293.1| coenzyme PQQ biosynthesis protein B [Ralstonia sp. 5_7_47FAA] Length = 305 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 107/316 (33%), Gaps = 68/316 (21%) Query: 7 FTILGCGASLGVPRITGDWGACD-------PTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 +LG A G P+ + CD P RT+SS+ + G + ++V+ Sbjct: 4 LRVLGSAAGGGFPQWNCNCRNCDGVRRGTVRATP---RTQSSIAL----GDGQHNWLVVN 56 Query: 60 TGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 PD Q+ L I V+ DH+ G+ LR + ++ + VYA Sbjct: 57 ASPDILAQLRSSPALQPARTPRDTGIVGVVLMDAQIDHVTGLLMLR----EHRQALPVYA 112 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L +F Y + + + + AIP+ + Sbjct: 113 SAAVISDLSTAFP---LTRMLSHYCGLDTRALALDGTAFSVPPLDDVALTAIPLESKAPP 169 Query: 171 I----------SSLGFRF-----GNVA-YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 ++G R G A Y + L+++ D +++D Sbjct: 170 YSPSRNARRVGDNIGLRIVDRKSGRRAFYAPGLARVEPHVLDEMGAADVVLVDGTCWRND 229 Query: 209 --LKNGLHSSHF----SLSES-----LKKIELINPKNAILTHMHVD---LDYDM-VLKST 253 L G + L++S + ++ + +L H++ LD D + Sbjct: 230 EMLALGFSTKTAADMGHLAQSGPGGMIDVLDQLPATRKVLIHINNTNPILDEDSPQRREL 289 Query: 254 PSR-VVPAFDGMQFSS 268 + + A+DGM+ S Sbjct: 290 EAHGIEVAYDGMEISL 305 >gi|222082770|ref|YP_002542135.1| hypothetical protein Arad_9513 [Agrobacterium radiobacter K84] gi|221727449|gb|ACM30538.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 276 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 75/248 (30%), Gaps = 39/248 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R +I D G L ++ V +D + +TH H DH+ G+ + Sbjct: 32 SCIELRHDGRRIIFDAGTGAREAALSLAKDGVHEVD-IFFTHSHYDHMLGLPFFKPI-YD 89 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +D+++ K F P I + + G ++ Sbjct: 90 PGVSVDLWSGHLAGKTTTRQLIGQFMRPPWFPVEP-----DICRATMGFRDFAPGDTLKP 144 Query: 162 IPILQQH-----GRISSLGFRFGN------VAYCTD-VNA-FPAESLEKLQNLDFLIIDA 208 P + H +G+R + Y T+ VN +L + D + D Sbjct: 145 HPGIVIHTAKLNHPGGCVGYRIEWAGRIIALVYDTEHVNGHMDEAALSLMAGADLAVYDT 204 Query: 209 LKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV-----DLDYDMVLKSTPS-- 255 S H + E ++ + K L H D D D + + Sbjct: 205 TYTEAEMSKHQGFGHSTWQEGVRLAKEAGAKRLAL--FHHAQWRTDKDLDDMQRDARESF 262 Query: 256 -RVVPAFD 262 AFD Sbjct: 263 PGAFAAFD 270 >gi|15922660|ref|NP_378329.1| hypothetical protein ST2327 [Sulfolobus tokodaii str. 7] gi|15623450|dbj|BAB67438.1| 232aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 232 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 25/233 (10%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG- 94 +R +SS+ I + T+V++D G ++ +L +A+ TH H DHI+G+ Sbjct: 17 KRVKSSIYI----KSNEGTSVLLDLGTGANFKIEDLNLLDFEAIFITHLHIDHINGLFDH 72 Query: 95 -LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 ++ L+ K I VY+ P + L Y + + +D+ I Sbjct: 73 LVQRKILRMKE-IRVYSPPGILNVLD---SYVKSGNNISANVIESELPKAKISDLEIYSV 128 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID--ALKN 211 A I A+ + G + Y D L++ ++ D +I + + N Sbjct: 129 EACHSIYAVSYIITDGE--------KKIIYTGDTLEPCETVLDEAKDADLIIHEGSCIDN 180 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 H S+ + ++ + I+TH+ + + +K + A DGM Sbjct: 181 CKQYGHTSVKQLIEMYDR---NKLIITHIPAQI--ENQVKEIAKGYIIAHDGM 228 >gi|300711186|ref|YP_003737000.1| beta-lactamase domain protein [Halalkalicoccus jeotgali B3] gi|299124869|gb|ADJ15208.1| beta-lactamase domain protein [Halalkalicoccus jeotgali B3] Length = 259 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 90/297 (30%), Gaps = 72/297 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R ++ L + R T++VD G Sbjct: 1 MRITFLGTGSAM----------------PTGERFQTGLLLER-----EGRTLLVDCGSGA 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDC---MKHL 118 + R V + +VL TH H DH+ + L +++ + L Sbjct: 40 LHGLARTSVGYEGVSSVLLTHHHLDHVADLLPLMKARWLAGEDHLEIAGPRGTKSLVDGL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y ++ V E + +H + L +RF Sbjct: 100 LNVHEYM---------RGRLDLTVREVGPYDFEIA----DFSVEGYETRHS-MYCLAYRF 145 Query: 179 GNVAYCTD----------VNAFPAES------LEKLQNLDFLIIDALKNG-----LHSSH 217 G V+ +D V F A+S + L+ D H + Sbjct: 146 GGVS-ESDSEVRETKSRGVFTFSADSDAFEGLANFAEGSAVLVHDCSFPDDTDVSGHPTP 204 Query: 218 FSLSESLKKIELINPKNAILTHM--HVDLDYDMV----LKSTPSRVVPAFDGMQFSS 268 L E+L E+ L+H+ H D ++ + V A DG+ + Sbjct: 205 AQLGEALSGHEI---GRIYLSHLYPHTDGRHEEMLESIAAQYDGDVRFAEDGLSVTI 258 >gi|41017539|sp|Q7V5W1|RNZ_PROMM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 318 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 77/301 (25%), Gaps = 90/301 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V +H H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGPDPLESYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 R + YP + + + + I H R+ + +R Sbjct: 102 VLR---NSSTRIGYP--LKVHRVRDAAEQNLIVFEDKDILVRCTPLTH-RVPAYAYRVEQ 155 Query: 179 ------------------------------------GNVA----------------YCTD 186 G V +CTD Sbjct: 156 KPKPGHFNLERAQSLGIPPGPVYAALKRGEQVSLDDGRVVDGRDFCGPDRPGASIVFCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHM 240 F ++ D LI +A H + + + + +LTH+ Sbjct: 216 TV-FSEAAVSLAAGADLLIHEATFAHSEAEMAYQKQHSTSTMAAQTAAEAGVGKLVLTHL 274 Query: 241 H 241 Sbjct: 275 S 275 >gi|323345179|ref|ZP_08085403.1| metallo-beta-lactamase superfamily protein [Prevotella oralis ATCC 33269] gi|323094449|gb|EFZ37026.1| metallo-beta-lactamase superfamily protein [Prevotella oralis ATCC 33269] Length = 267 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 84/237 (35%), Gaps = 50/237 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N +++D+G +L++ I +L TH H DH+ + + + Sbjct: 21 ENDGLMIDSGVGIR--ILKKHFREYGLSLSAIHHILITHDHTDHVKSVGSIS-----RDY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + ++ YC + + P +E + + ++ G P Sbjct: 74 NLPVYATHKVHVGIEQN--YCVRNK--------IAPERVEIVEKDVSIQ--VGEFIVTPF 121 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H ++G++ + TD E + + ++L+I+A L +G + Sbjct: 122 EVPHDSSDNVGYKIEHGGITFCLITDAGHLTEEMKQSIGEANYLVIEANHDEEMLASGPY 181 Query: 215 SSHF--------------SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L + + ++ L H+ + ++ + + T + Sbjct: 182 PQHLQTRISGPTGHLSNNDCATALTENATEHLRHVWLCHLSGENNHPELARKTVEHM 238 >gi|139473042|ref|YP_001127757.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|134271288|emb|CAM29504.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] Length = 259 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGRAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|282879887|ref|ZP_06288614.1| putative ribonuclease Z [Prevotella timonensis CRIS 5C-B1] gi|281306281|gb|EFA98314.1| putative ribonuclease Z [Prevotella timonensis CRIS 5C-B1] Length = 305 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG+++ P R SS + +VD G Sbjct: 4 FRIHILGCGSAM----------------PTLRHHPSSQVVEI-----REKLFMVDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ R ++ + AV TH H DH G+ G+ F R P+ +YA ++ L + Sbjct: 43 QVQLRRAKIKFTKLQAVFITHLHGDHCLGLIGMLSTFGMLGRTAPLHIYAPQ-TLEALLQ 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F + V +E + + IE+IP+ R+ GF F Sbjct: 102 TQIAVFCPGLEYE----VKFHAVETTQHQVIYEDRSLTIESIPLAH---RLPCCGFLF 152 >gi|76801097|ref|YP_326105.1| PhnP-like protein [Natronomonas pharaonis DSM 2160] gi|76556962|emb|CAI48536.1| homolog to PhnP-like protein [Natronomonas pharaonis DSM 2160] Length = 294 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 94/301 (31%), Gaps = 65/301 (21%) Query: 8 TILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G + +P T + C P R +L I +S +VD Sbjct: 5 TVLGSGGNFPLPTPTCECRLCVEARSEGIPYARHGN-NLYIEDLSA-------VVDAPEF 56 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGI-------------DGLRGYFLKQKRPIDVYA 110 + + R V + TH H DH G+ D RG + + Sbjct: 57 VFENLNRAGVDEFSYLFLTHWHPDHTAGLRVVQSRPDASLFDDSDRGIIDTARSDVP--- 113 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ-QHG 169 + +FE + L + V ++++ + + G +EAIP + Sbjct: 114 TLVTTERVFERTCELYDGLRHFSEMGYVETHFLDDDPLVVD----GIRVEAIPYSLSGNS 169 Query: 170 RISSLGFRF--GNVAYC---TDVNAFPAESLEKLQNLDFLIIDALKNGLHS--------- 215 + + F G+ D +L ++D + + Sbjct: 170 DMDATAFVLFDGDTTVVLAPDDARYLDEAALP--DDIDLAVFECGYFEQTPDGTPILADA 227 Query: 216 ---------SHFSLSESLKKIELINPKNAILTHMHV----DLDYDMVLKSTPSRVVPAFD 262 +H E L +I+ + P+ +LT + D L + + A+D Sbjct: 228 DAAVFDDELTH---GEVLARIDRLAPERTLLTEIEHIYARSHDQLQALANGYDGIEFAYD 284 Query: 263 G 263 G Sbjct: 285 G 285 >gi|318042224|ref|ZP_07974180.1| ribonuclease Z [Synechococcus sp. CB0101] Length = 316 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 84/309 (27%), Gaps = 106/309 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP T +N S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVP-----------TRGRN----VSAVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR +V + + TH H DH+ G+ GL ID+Y +L Sbjct: 42 QHQFLRSELRVSQLRRIFVTHMHGDHVFGLPGLLASLGLAGTCNGIDLYGPDPLRDYLEG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 + R P + +++ + I H R+ + + Sbjct: 102 ----VLRTSSTRIGYP-LRSHRVKDAASSGALLLDDDDITVRCTKLIH-RVPAYAYRVDQ 155 Query: 177 -----RFG---------------------------------------------NVAYCTD 186 RF +V YCTD Sbjct: 156 KPRAGRFDVEQARALGIAPGPVYAELKAGREVVLDDGRIINGASLCGPERPGCSVVYCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 F ++E Q D LI H S H + + + + Sbjct: 216 TV-FSEAAVELAQGADLLI--------HESTFAHAEAEMAFARQHSTSTMAAQTALAAGV 266 Query: 233 KNAILTHMH 241 K +LTH+ Sbjct: 267 KQLMLTHLS 275 >gi|294338898|emb|CAZ87235.1| Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone biosynthesis protein B) [Thiomonas sp. 3As] Length = 305 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 103/314 (32%), Gaps = 67/314 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + CD +RRT+SS+ +S ++ +T PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCDGLRSGTIRASRRTQSSIALSADGGDW----IVFNTSPDI 60 Query: 65 YMQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ R + I A++ DH G+ LR + +P+D++ Sbjct: 61 LQQIRAFPALQPGRRLRDTGIRAIVLIDAQIDHTTGLYMLR----ESSKPLDIWCTEQVR 116 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--------Q 167 L F L+ V V+ + ++ G + + Sbjct: 117 DDLRNGNP-IFDILEHYC---KVTWHVMPIDGSGFEIEG-IGDLHFAAVPLRSKAPPYSP 171 Query: 168 HGRISSLGFRFG------NVA----YCTDVNAFPAESLEKLQNLDFLIIDA--------L 209 H G G A Y + +++ D +++D + Sbjct: 172 HRENPHPGDNVGITIRDRRTARTAFYAPGLADIEPHVWHAMRSADCVLVDGTFWTHDEMI 231 Query: 210 KNGLHSSHF----SLSES-----LKKIELINPK-NAILTHMHVD---LDYDMVLKS--TP 254 + G+ + L +S ++ + + + +L H++ LD D + ++ T Sbjct: 232 RLGVGTKTAVEIGHLPQSGPGGMIEHLSRLPAQTRKLLIHINNTNPILDEDSLQRAELTA 291 Query: 255 SRVVPAFDGMQFSS 268 + DG+ Sbjct: 292 RNIEVCHDGLDIQL 305 >gi|315502498|ref|YP_004081385.1| beta-lactamase domain protein [Micromonospora sp. L5] gi|315409117|gb|ADU07234.1| beta-lactamase domain protein [Micromonospora sp. L5] Length = 248 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 77/236 (32%), Gaps = 31/236 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP 105 +++D G +L + +DAV +H H DH + L R + P Sbjct: 25 EHDGFRLLIDPGYATLQPLLALTRAEHVDAVYVSHGHPDHCADLQPLVRARVLANRSGPP 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA + L P ++ P P G E Sbjct: 85 LPVYAPTGSLAGLLA-----------IDEPGLLEPGYRLTGFTP-GETLRLGPYEVRTFA 132 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-HF-S 219 H + + G RF +AY D PA +E ++ D LI +A H + Sbjct: 133 LPH-WVPNAGARFSAPGLVLAYTGDTGPSPAR-VELARDADLLIAEATYPDELPQRHEGN 190 Query: 220 LSESLK---KIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 LS +++ + +LTH+ + L + V A G+ + Sbjct: 191 LSSAVEVGRYAAEAGVRRLLLTHLWPGTEPREALAAVRRGFASPVEVAAPGLTVTV 246 >gi|15896976|ref|NP_341581.1| hypothetical protein SSO0006 [Sulfolobus solfataricus P2] gi|284173871|ref|ZP_06387840.1| hypothetical protein Ssol98_04330 [Sulfolobus solfataricus 98/2] gi|13813131|gb|AAK40371.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261601629|gb|ACX91232.1| beta-lactamase domain protein [Sulfolobus solfataricus 98/2] Length = 228 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 54/273 (19%) Query: 5 YHFTILGCG--ASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T +G G +SLG+ +R +SS+ I N V++D GP Sbjct: 1 MKITFIGTGAGSSLGL-----------------KRVKSSILI--------NDKVLLDLGP 35 Query: 63 --DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKH 117 + ++ LR + A+ TH H DH G+ ++ R I +Y +P Sbjct: 36 GAELRLEDLR---IHPKALFITHLHIDHFSGVFD--YLVQRKIRQIPELVIY-SPKGFSE 89 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + + + Y + I+ ++ I A I A+ + G L Sbjct: 90 VLNIYTRIGNNISAKIYESDLPSGKID--EMEIYSIQACHSIYAVSYIISDGNTRVL--- 144 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIID--ALKNGLHSSHFSLSESLKKIELINPKNA 235 Y D LE ++++D +I + + + H S+ + + K Sbjct: 145 -----YTGDTKEPCNAILENIKDVDLIIHETTCVDDCSIWGHTSIKQIFELFSN---KRI 196 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 TH+ +++ + ++ +++ AFDG+ + Sbjct: 197 FATHIPAEIE-EKIISLANNKINIAFDGLSLNV 228 >gi|83749087|ref|ZP_00946093.1| Metal-dependent hydrolase [Ralstonia solanacearum UW551] gi|207742546|ref|YP_002258938.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein [Ralstonia solanacearum IPO1609] gi|83724277|gb|EAP71449.1| Metal-dependent hydrolase [Ralstonia solanacearum UW551] gi|206593938|emb|CAQ60865.1| arylsulfatase precursor (aryl-sulfate sulphohydrolase) protein [Ralstonia solanacearum IPO1609] Length = 321 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 81/264 (30%), Gaps = 51/264 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 44 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 83 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHL--- 118 Q + + +I V TH H+DH G L + P+D + P Sbjct: 84 RQYVSAGLKLKAIRHVFITHQHSDHNADYGALMLLAWGTDLTGPVDTWGPPPLAAMTTKF 143 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 E + Y + P + P++ + + ++ L +H + + +R Sbjct: 144 LELYDYDIRTRIADEGRPPLAPMLHPHELTEGGLVMQDANVKVTSALVKHPPVSPAFAYR 203 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLHS 215 F ++ D + D L+ +D L+ L + Sbjct: 204 FDAADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDKLLSTERNAKTLREHLLA 262 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 SH E + K +L+H Sbjct: 263 SHTPAEEVGRIATEAKVKTLVLSH 286 >gi|327440454|dbj|BAK16819.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Solibacillus silvestris StLB046] Length = 313 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 103/329 (31%), Gaps = 102/329 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA + P+ +N SS+ + ERGS + D G Sbjct: 1 MQIQFLGTGAGM-------------PSKERNT---SSIAFKLLEERGSI--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L V ID + TH H DHI G+ G FL + + +Y + + + Sbjct: 43 QHQILHTTVKPRKIDKIFITHLHGDHIFGLPGFLSSRSFLGGEDMLTIYGPAGLQQWIEQ 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + TYP IE +V + + QH + G+R Sbjct: 103 TLQ---LSKTHLTYP-------IEFVEVKDGIVFEDEKFTVRALSLQH-VVPCFGYRIEQ 151 Query: 179 ------------------------------------GNVAYCTDVNAFP----------- 191 G V +DV + P Sbjct: 152 KPMQGELLIDKALALGVPKGPLLGQLKAGHSVKLEDGTVVESSDVTSPPQPGFTVAILGD 211 Query: 192 ----AESLEKLQNLDFLIIDALKNGLHSS--------HFSLSESLKKIELINPKNAILTH 239 S+ QN D ++ +A + HS+ H + +E+ K + ++ +L H Sbjct: 212 TKYCENSIRLAQNADVVVHEATFD--HSTIELAGKYGHATNTEAAKIAKEAQARHLLLNH 269 Query: 240 MH-----VDL-DYDMVLKSTPSRVVPAFD 262 + DL + K+ A D Sbjct: 270 ISARFLKHDLIPFLEEAKAIFENSYLAND 298 >gi|288905745|ref|YP_003430967.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|306831843|ref|ZP_07464999.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978778|ref|YP_004288494.1| Metallo-beta-lactamase superfamily [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732471|emb|CBI14043.1| conserved metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|304426041|gb|EFM29157.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178706|emb|CBZ48750.1| Metallo-beta-lactamase superfamily [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 269 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 78/246 (31%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++D G +L E + +DA+ TH H+DHI G+ L ++ + Sbjct: 25 PQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVG-----VLARRYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I + + + G I+ Sbjct: 80 DVYANEKTWQMIDERNM-------------IGKLDLAQKHIFERGKTLTLGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L++G + Sbjct: 127 SHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAGIIENADGYLIESNHDVEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I I K L H+ +L + + + + Sbjct: 187 SLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMENNLIQAD 246 Query: 257 VVPAFD 262 +D Sbjct: 247 FGVGYD 252 >gi|311747451|ref|ZP_07721236.1| ribonuclease Z [Algoriphagus sp. PR1] gi|126574810|gb|EAZ79181.1| ribonuclease Z [Algoriphagus sp. PR1] Length = 306 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 33/182 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + TILG +S +P R +S I E +++D Sbjct: 1 MSPDFEVTILGNTSS--IPVHG--------------RNHTSQVIRFGQEL-----LLLDC 39 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG-LRGYFL-KQKRPIDVYAAPDCMK 116 G +Q+ R +V I + +H H DH G+ G L + L K+ + + +Y + Sbjct: 40 GEGTQIQLRRYKVKPSKISNIFISHLHGDHYLGLVGLLSSFNLAKRTKALTIYGPQGLDE 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + +FR+ + +YP +N + + + + + +H R+ + GF Sbjct: 100 IITTNFRW---SNTKLSYP--LNFVQTNTQGLNLLFEEP--KFQVFSFPLKH-RLPTTGF 151 Query: 177 RF 178 Sbjct: 152 LI 153 >gi|324994825|gb|EGC26738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK678] gi|325687266|gb|EGD29288.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK72] Length = 266 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 91/292 (31%), Gaps = 73/292 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R + + T+++ Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLL--- 43 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 G + +DA+L TH H DHIHG+ L +K +D+YA K + + Sbjct: 44 GEICR------KPEDLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANESTWKAMEK 92 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + + G ++ H +RF Sbjct: 93 DLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMK 137 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 138 DDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLS 197 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 + + I + K L H+ +L + ++ + + D Sbjct: 198 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADLAVGHD 249 >gi|322381338|ref|ZP_08055341.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154914|gb|EFX47185.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 274 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 41/219 (18%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD G Q++ E+ ++A+ TH H+DHI G+ L +K Sbjct: 26 DTGETKLLVDAGLSAKKLEQLMEERGVSGQELNAIFVTHEHSDHIKGLGALS-----RKH 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + L + + + + + EN I ++S G +A Sbjct: 81 QLPIYANQKTWEQLDKYIGTI--TDEHKRFMETGTSVEFEN----IRIESYGISHDAA-- 132 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS--- 215 + G I G R ++A TD+ ++ +K+ + D LI++ L+ G + Sbjct: 133 -EPVGYILYQGSRKLSIA--TDLGYMSSKVKDKIGDSDALILETNHDIEMLRVGHYPWNI 189 Query: 216 --------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S + + + I K+ + H+ D Sbjct: 190 KRRILSDIGHLSNEAAGEALCDILTEKTKSVYMAHLSRD 228 >gi|310659851|ref|YP_003937572.1| metallo-beta-lactamase family protein [Clostridium sticklandii DSM 519] gi|308826629|emb|CBH22667.1| metallo-beta-lactamase family protein [Clostridium sticklandii] Length = 264 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 53/223 (23%) Query: 52 SNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S T ++VD G + ++ ++ TH H+DHI G+ + ++ Sbjct: 22 SKTKILVDAGLSGKKIEEHLRQH--HVDLSTLGGIMVTHEHSDHIKGVG-----IISRRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V+A + + K + R + P + G IE P Sbjct: 75 DVPVFATIKTWESMENCLGKI-KPENKRVFTP--------------YESFSIGDIEINPF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + S GF ++ TD+ + +E + + + +I+++ LK G + Sbjct: 120 STSHDAVDSCGFAISDGKNKLSIATDLGCVTDKVMEYISHSELVILESNHDEQMLKMGSY 179 Query: 215 S-----------SHFSLSESLKKI---ELINPKNAILTHMHVD 243 H S +++ + K +L H+ + Sbjct: 180 PYYLKQRVLSEFGHLSNADAGDVAAKLAKLGTKAVLLAHLSQE 222 >gi|2765031|emb|CAA71027.1| hypothetical protein [Calothrix viguieri] Length = 296 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 80/252 (31%), Gaps = 42/252 (16%) Query: 52 SNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++ D TG Q L Q+ + + +TH H DH+ G F++ +Y Sbjct: 41 GGKRLVFDGGTGLHVLGQSLLRQMPATAHIFFTHSHWDHMQGFPFFTPGFVR-GNHFCIY 99 Query: 110 AA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 A + L + + P + ++ DV I Sbjct: 100 GAIAPDGSTVEQRLNDQM-----LHPNFPVPLQIMQADLDFYDVAPGEPIKIDDIVVETA 154 Query: 165 LQQHGRISSLGFRF----GNVAYCTDV----NAFPAESLEKLQNLDFLIIDALKNGLHSS 216 H ++G+R G AY TD + L +N D LI D+ + Sbjct: 155 PLNHPG-EAVGYRVNWCGGAAAYITDTEHFADHLDENVLWLARNADILIYDSTYTDEEYN 213 Query: 217 ----------HFSLSESLKKIELINPKNAILTHMHVDLDYD--------MVLKSTPSRVV 258 H + E++K + N K ++ H D +D S V Sbjct: 214 SPKSPKIGWGHSTWQEAVKVAQAANVKTLVI--FHHDPAHDDDFLDSVGKQAAQKFSGAV 271 Query: 259 PAFDGMQFSSPI 270 A +GM P+ Sbjct: 272 MAKEGMVLEVPV 283 >gi|218131057|ref|ZP_03459861.1| hypothetical protein BACEGG_02661 [Bacteroides eggerthii DSM 20697] gi|217986761|gb|EEC53094.1| hypothetical protein BACEGG_02661 [Bacteroides eggerthii DSM 20697] Length = 296 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 53/230 (23%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHI---HGIDGLRGYFLKQKRPID 107 +++D G + L+E + I AV TH HADHI G+ I Sbjct: 55 ILIDAGIAVRTIKKGLKEAGINMEMIRAVFVTHDHADHIKAVGGLGEKLN--------IP 106 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + +S+ K Y P+ +E+ Sbjct: 107 IYTTARIHEGINKSYCMTEKLHSSVRYLEKQQPMQLED-------------FRIESFEVP 153 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H ++G+ ++ TD+ + + + ++LI++A L+ G + Sbjct: 154 HDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAQYICKANYLILEANYDDEMLRMGSYPQY 213 Query: 216 ---------SHF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H ++ + E I + L H+ D ++ + T Sbjct: 214 LKERITSRTGHMSNIDTAEFLAENITEHLQYIWLCHLSKDNNHPELAYKT 263 >gi|21909688|ref|NP_663956.1| hypothetical protein SpyM3_0152 [Streptococcus pyogenes MGAS315] gi|28895069|ref|NP_801419.1| hypothetical protein SPs0157 [Streptococcus pyogenes SSI-1] gi|50913559|ref|YP_059531.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71902842|ref|YP_279645.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|94987812|ref|YP_595913.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94991688|ref|YP_599787.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|306828138|ref|ZP_07461401.1| metallo-beta-lactamase [Streptococcus pyogenes ATCC 10782] gi|21903871|gb|AAM78759.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810314|dbj|BAC63252.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|50902633|gb|AAT86348.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71801937|gb|AAX71290.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|94541320|gb|ABF31369.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94545196|gb|ABF35243.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|304429675|gb|EFM32721.1| metallo-beta-lactamase [Streptococcus pyogenes ATCC 10782] Length = 259 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|324991494|gb|EGC23427.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sanguinis SK353] Length = 266 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 93/294 (31%), Gaps = 77/294 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI--V 58 M + ++IL G+S G C +R + + T+++ + Sbjct: 1 MTKGFQYSILASGSS----------GNCFYLETDQKR----ILVDAGLSGKKITSLLGEI 46 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D P+ +DA+L TH H DHIHG+ L +K +D+YA K + Sbjct: 47 DRKPE-----------DLDAILVTHEHKDHIHGVG-----VLARKYHLDIYANEATWKTM 90 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + G ++ H +RF Sbjct: 91 EKDLGKLDASQK---------------HIFELGKTKTFGDLDVESFGVSHDAACPQFYRF 135 Query: 179 ----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SH 217 + TD ++N D +LI I+ L++G + H Sbjct: 136 MKDDKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGTYPWSLKQRILSDMGH 195 Query: 218 FSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKSTP-SRVVPAFD 262 S + + I + K L H+ +L + ++ + + D Sbjct: 196 LSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLAQADMAVGHD 249 >gi|306825163|ref|ZP_07458505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432599|gb|EFM35573.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 269 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|304436421|ref|ZP_07396396.1| metallo-beta-lactamase superfamily protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370585|gb|EFM24235.1| metallo-beta-lactamase superfamily protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 247 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 71/229 (31%), Gaps = 58/229 (25%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGL 95 S+ I +++D G + LR +IDA+L TH H DH+ G+ Sbjct: 10 SVYIEL-----DGVRLLIDAGISAARITKALRANEIDPQTIDAILLTHEHIDHVRGLK-- 62 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + + A + + D + + Sbjct: 63 ---TLSKQYHLPILATRGTLAGI------------DGGAVFAEDMHCVSG-------DFC 100 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIIDA--- 208 G + P H GFR +YC TD+ E ++ D L+ +A Sbjct: 101 VGDVTIHPFPISHDAADPCGFRVEG-SYCCTLATDLGVVTDTVQEAMEGADVLVFEANHD 159 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELIN--PKNAILTHMH 241 L+ G + H + E+ + + P L H+ Sbjct: 160 TDLLRKGKYPWPLKRRILSNRGHLANVEAGWALTRMKKIPHKVFLAHLS 208 >gi|260913103|ref|ZP_05919585.1| arylsulfatase [Pasteurella dagmatis ATCC 43325] gi|260632690|gb|EEX50859.1| arylsulfatase [Pasteurella dagmatis ATCC 43325] Length = 327 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 89/271 (32%), Gaps = 52/271 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG G P I P R +S + + +VD G Sbjct: 31 SNLDVVVLGSGG----PEIQLF----RSNPPPQARASASYLVRENGQ----AKFLVDLGT 78 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAA------P 112 ++ + A+ +H H DHI+ + L +F + + +Y P Sbjct: 79 GALQNFAQADAKIEDLKAIFVSHFHVDHINDLPSLLKASFFSNRTDDLPIYGPTGNEVIP 138 Query: 113 DCMKHLFESFR----YCFKALDDRTYP-PIVNPIVIE-NNDVPICMKSAGGVIEAIPILQ 166 D + + F Y + + +V PI I + P+ + + I Sbjct: 139 DTAQFISRLFGENGAYAYLSDFLSGDANYLVKPISINADKHNPVVFNTEVDGFQIQAIGT 198 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------ 216 +HG + +L +R V + D + K + L+ L+ +A H++ Sbjct: 199 EHGLLPALAWRIEKNGCSVVFSGDTSN-------KGKTLNQLVKNANWFVAHNAVPESSQ 251 Query: 217 -------HFSLSESLKKIELINPKNAILTHM 240 H SE + KN +L+H+ Sbjct: 252 DKVAQKLHMKPSEIGDIAKQGEVKNILLSHL 282 >gi|282600416|ref|ZP_05974219.2| ribonuclease Z [Providencia rustigianii DSM 4541] gi|282565280|gb|EFB70815.1| ribonuclease Z [Providencia rustigianii DSM 4541] Length = 306 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 35/183 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP K+ R +S+ + + R + D G Sbjct: 3 MELTFLGT--SAGVPT-------------KD-RNVTSMLLDLIGIR--KNYWVFDCGEGT 44 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAAPDCMKHLF 119 ++L I+ + TH H DHI G+ GL P+ +Y +++ Sbjct: 45 QYRILNSPFKPSKIEKIFITHLHGDHIFGLPGLLC-SRSMGGSTDPLTIYGPKGLKQYIE 103 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + TYP + I IE + G + H R+ G+R Sbjct: 104 TALS---LSSSYMTYP--LEIIEIEEGQL-----FDDGKLIVTAYSLDH-RVECYGYRIE 152 Query: 180 NVA 182 A Sbjct: 153 EYA 155 >gi|253988350|ref|YP_003039706.1| hypothetical protein PAU_00869 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779800|emb|CAQ82961.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 316 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 87/271 (32%), Gaps = 48/271 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K + ILG G P ++R S I + +++D G Sbjct: 30 KKDFTLQILGSGG----PI------------SDDQRASSGELIWLNG----KSAILIDAG 69 Query: 62 PD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP--DCM 115 ++ + + TH H DH+ + + GYFLK K ID+ Sbjct: 70 GGVFLRFGQSGARLEDLKFIGITHFHTDHVSDLAAILKGGYFLKDKENIDIVGPAGGGAF 129 Query: 116 KHLFESFRYCFKALDD-----RTYPPIVNPIVIENNDVPICMKSA-------GGVIEAIP 163 + + F FK + I I +N + SA ++ Sbjct: 130 PSMTKYFSDLFKKEGGAYSYLNGVYNATDGIKISSNIKDVDYSSAEPQLVYQDREMKITA 189 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSS-- 216 I HG + L FR G + D N + + D L++ A++ + Sbjct: 190 IGIPHGDVPCLAFRIETSKGTIVISADQNGSNKAFIPFAKGADMLVMPLAIEANADETSN 249 Query: 217 --HFSLSESLKKIELINPKNAILTH-MHVDL 244 H S K INPK IL H M L Sbjct: 250 FLHASPEVVGKVAAEINPKVLILNHFMGKGL 280 >gi|86609098|ref|YP_477860.1| ribonuclease Z [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557640|gb|ABD02597.1| ribonuclease Z [Synechococcus sp. JA-2-3B'a(2-13)] Length = 328 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 37/185 (20%) Query: 1 MKDY--YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M D T LG S G+P R+ S + +R + Sbjct: 1 MTDPNAIRITFLGT--SSGMPT---------------RQRNVSGVAVQFPQRSE--WWLF 41 Query: 59 DTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPD 113 D G Q+LR + + + TH H DHI+G+ GL P ID+Y P Sbjct: 42 DCGEGTQHQLLRLDELRPSQLRRIFITHMHGDHIYGLPGLLASCGLGSTPEHIDIYGPPG 101 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 ++L RY + P +E + ++ + P+ R+ + Sbjct: 102 LEEYLKAVLRY-----SETRIPYGFRVHTVETG---LILQEPEYSVFCAPLDH---RVPA 150 Query: 174 LGFRF 178 G+R Sbjct: 151 FGYRV 155 >gi|304317993|ref|YP_003853138.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779495|gb|ADL70054.1| beta-lactamase domain-containing protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 259 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 54/221 (24%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++VD G + ++ + SI A+L TH H DHI G L ++ I Sbjct: 21 DVHILVDAGLSGSTIEKSLESIDVNPCSISAILITHEHNDHIKG-----AGVLSRRYNIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQ 166 +YA + ++ I +N G + P + Sbjct: 76 IYANEATWASMEN----------------LLGEINCDNKRFFKTGEDFTLGDVRIRPFKK 119 Query: 167 QHGRISSLGFRF----------GNVAYCT--DVNAFPAESLEKLQ---NLDFLIID---- 207 H + +GF F ++ Y + + L+ ++D LI Sbjct: 120 SHDAVEPVGFSFFCGQNKATIATDLGYISRGVAANIMDSDIVLLESNHDVDMLINGSYPW 179 Query: 208 ALKNG---LHSSHFSLSESLKKIEL-INPK---NAILTHMH 241 LK H H S ++ + I+ I K L H+ Sbjct: 180 TLKKRILSPHG-HLSNKDAAEAIKKFIKLKSIGKIYLGHLS 219 >gi|148251828|ref|YP_001236413.1| putative hydrolase [Bradyrhizobium sp. BTAi1] gi|146404001|gb|ABQ32507.1| putative hydrolase [Bradyrhizobium sp. BTAi1] Length = 314 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 99/308 (32%), Gaps = 61/308 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + LG G PR+ +NP N + + T ++D G Sbjct: 29 RTGTRIVFLGT---KGGPRVGIG-----ASNPAN-------LVVV-----NGTPFVIDCG 68 Query: 62 PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKH 117 Q++ + S+ +L +H H+DH L PI + ++ Sbjct: 69 MGVSRQLVNAGVPIPSVKYILISHHHSDHNLEYGNLVYNAWAAGLSTPIQSFGPKG-LEA 127 Query: 118 LFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS- 172 + SF ++ P P++I + + + H I+ Sbjct: 128 MTRSFWETNKFDVDTRIGDEGRPDPRPLLIAKDIDADGVVVKTADVTVTAFRTPHPPITD 187 Query: 173 SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LK 210 + ++F G + + +D A+ + E + D L+ + LK Sbjct: 188 NFAYKFETPDGTIVFSSDT-AYNPKLAEFARGADVLVHECLYVPAVDRLVIKTKNGATLK 246 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD--------MVLKSTPSRVVPAFD 262 L SH + + + K +L+H D + V K+ R+V A D Sbjct: 247 KHLLESHTTTEDVGRIAAAAGVKALVLSHFVPGDDPEVTDEDWTRDVKKNYSGRIVVAKD 306 Query: 263 GMQFSSPI 270 M+ P+ Sbjct: 307 LMELKLPV 314 >gi|256854039|ref|ZP_05559404.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|256710982|gb|EEU26025.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 246 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 25 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 82 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + V E + + A G Sbjct: 83 PTPILPIYG----------------HTQDQMHFKELTLSNVSEGKEYFEAEELAVGPFLI 126 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 127 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 184 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 185 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 224 >gi|226307367|ref|YP_002767327.1| hypothetical protein RER_38800 [Rhodococcus erythropolis PR4] gi|226186484|dbj|BAH34588.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 255 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 82/251 (32%), Gaps = 46/251 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S ++ +++D GP Sbjct: 4 MRMTVLGCSGS----VTGPDSPA------------SGYLLTAPGTPP----LVIDFGPGV 43 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHL 118 + R +L +H HADH + GL ++ P VY D + Sbjct: 44 LGALQRYADPGEVTILLSHLHADHCLDMPGL--LVWRRYHPNPPVGRALVYGPTDTACRI 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S C +DD + ++ + N+ P+ G + + H + GFR Sbjct: 102 GVSSAECAGEMDDISD--TIDVRLWAENE-PVTF----GELSVVARRMNHPP-EAYGFRI 153 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIEL 229 + Y D +E + D L+ +A + H S E+ + L Sbjct: 154 TGADGRVLVYTGDT-GMCDNVVELARGADVLLSEASWTDSPDRPEGVHLSGKEAGRVAAL 212 Query: 230 INPKNAILTHM 240 K +LTH+ Sbjct: 213 AGVKELLLTHI 223 >gi|39939874|ref|XP_359474.1| hypothetical protein MGG_05303 [Magnaporthe oryzae 70-15] gi|145010413|gb|EDJ95069.1| hypothetical protein MGG_05303 [Magnaporthe oryzae 70-15] Length = 959 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 94/306 (30%), Gaps = 72/306 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P R S+ + + D G Sbjct: 624 EVIALGTGSSL----------------PSVYRNVSATLLRVPGA----GNYLFDCGEGTL 663 Query: 66 MQVLRE-QVLSIDAVL-------YTHPHADHIHGIDGLRGYF----------LKQKRP-- 105 Q+ R + D +L +HPHADH G L + P Sbjct: 664 GQLRRHYGIEEADEILRDLRVVWLSHPHADHHLGTARLLQAWDAATSSLSATTSSGTPPF 723 Query: 106 IDVYAAPDCMKHLFE--SFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAI 162 + V M ++ E + Y L R P + E ++ G + I Sbjct: 724 LTVAGPTGLMNYIREYQNVEYISNRLILRGVARPNKTTRIAEPITFSETQQADLGGLTRI 783 Query: 163 PILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEKL-QNLDFLI---------- 205 + + S F VAY D P+E ++ Q LI Sbjct: 784 DVAKTDHCFDSFATVFTWEKTGLKVAYSGDCR--PSEEFVQIGQGATLLIHEATFENEKL 841 Query: 206 IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV---DLDYDMVLKSTPSR---VVP 259 +DA+ H ++ E++ + + ++TH + DM + + V+ Sbjct: 842 VDAMAKK----HSTMGEAMLVARRMKARRVLMTHFSQRYTSIPRDMAKRDSADGGMIVLF 897 Query: 260 AFDGMQ 265 AFD M+ Sbjct: 898 AFDHMR 903 >gi|15791057|ref|NP_280881.1| hypothetical protein VNG2239C [Halobacterium sp. NRC-1] gi|169236807|ref|YP_001690007.1| ribonuclease Z [Halobacterium salinarum R1] gi|41017581|sp|Q9HN60|RNZ_HALSA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808640|sp|B0R7E2|RNZ_HALS3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|10581652|gb|AAG20361.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167727873|emb|CAP14661.1| ribonuclease Z [Halobacterium salinarum R1] Length = 308 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 87/326 (26%), Gaps = 80/326 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG S VP R SS+ + R + + D G Sbjct: 2 TLEVTFLGT--SGAVPTT--------------ERNPSSVFVRRNGD-----AFLFDAGEA 40 Query: 64 FYMQVLREQVLS-IDAVLYTHPHADHIHGID-------------------------GLRG 97 Q++R + + V TH H DH+ G+ + Sbjct: 41 TQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGLRGDIED 100 Query: 98 YFLKQKRPI--DVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIEN--------- 145 + V + S Y +A + V ++E+ Sbjct: 101 LVFSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHSTASVGYALVEDDRTGRFDRA 160 Query: 146 --NDVPICMKSAGGVIE-AIPILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLE 196 ++ + + + P+ G + S G+ + Y D + Sbjct: 161 RAEELGVPVGPKFSTLHDGQPVELDDGTVVSPEQVVGDPRPGRTLVYTGDTRP-HDPVVS 219 Query: 197 KLQNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDM 248 ++ D LI DA + + H + E+ K LTH+ D Sbjct: 220 AAEDADLLIHDATFANDASERAAETGHSTAGEAADVATEAGAKALALTHVSSRYAGDASE 279 Query: 249 VLK---STPSRVVPAFDGMQFSSPIP 271 + A DG+ P P Sbjct: 280 ISAGASGFDGEAFVAHDGLTHEIPFP 305 >gi|116208200|ref|XP_001229909.1| hypothetical protein CHGG_03393 [Chaetomium globosum CBS 148.51] gi|88183990|gb|EAQ91458.1| hypothetical protein CHGG_03393 [Chaetomium globosum CBS 148.51] Length = 957 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 91/325 (28%), Gaps = 101/325 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 LG G+++ P R S+ I I+D G Sbjct: 646 SPQTEIVPLGTGSAM----------------PSKYRNVSATLIRVPG----WGNYILDCG 685 Query: 62 PDFYMQVLRE--------QVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRPIDVY 109 + Q+ R + + A+ +H HADH G + R + + + Sbjct: 686 ENTLGQLRRAFGYQAADDILRDLRAIYISHAHADHHLGTVNVLSRWREVA-PEGNKLALI 744 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---------- 159 A + E F + D + P + PI + + PI + A Sbjct: 745 ATQKYQDFIRE-----FHQVQDLS-PERIVPITLRSPGNPIPGRHAQATFPADFDPQTLQ 798 Query: 160 --EAIPILQQHGR--------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDA 208 + H G + +AY D P+ +L + L+ + Sbjct: 799 LPQIESCFVDHCYEATAVVLTFPDTGLK---LAYSGDCR--PSRQFAELGRGAHLLLHEC 853 Query: 209 LKNGLH------SSHFSLSESLKKIELINPKNAILTHMH-------------------VD 243 H +LSE+L + + +LTH D Sbjct: 854 TFEDELGGDALAKKHSTLSEALDVGRQMEARRILLTHFSQRYPKLPVVDEKALETDGRHD 913 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSS 268 +D V+ AFD M+ Sbjct: 914 MD-----------VLFAFDMMRVKL 927 >gi|87123649|ref|ZP_01079499.1| Ribonuclease Z [Synechococcus sp. RS9917] gi|86168218|gb|EAQ69475.1| Ribonuclease Z [Synechococcus sp. RS9917] Length = 315 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 79/300 (26%), Gaps = 88/300 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V TH H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFVTHMHGDHVFGLPGLLASLGLAGSSDGVDLYGPDPLEAYLQ- 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + YP V+ + + + ++ ++ P+ R+ + +R Sbjct: 101 --GVLHTSSTRIGYPLAVHRVREAAENGTVLLEDDDIIVRTTPLTH---RVPAYAYRIEQ 155 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 156 KPRPGRFDVDQARALAIPPGPIYAALKRGETVSLDDGRRIDGRQLCGPTRPGVSVVYCTD 215 Query: 192 ----AESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ + D LI +A + H + + + + + +LTH+ Sbjct: 216 TVFCEAAVALARGADLLIHEATFSHGEAEMAFQRQHSTSTMAAQTAAEAGVQQLVLTHLS 275 >gi|299140860|ref|ZP_07033998.1| VicX protein [Prevotella oris C735] gi|298577826|gb|EFI49694.1| VicX protein [Prevotella oris C735] Length = 267 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I+D G + + ++ +L TH HADH+ + L + + Sbjct: 21 ETDGLIIDAGVGIRTLKKHFKNYGLHLDNVHHMLITHDHADHVKSVGSLSKDYG-----L 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVY + + Y K + T+ IV + G + P Sbjct: 76 DVYTTHSVHVGIEHN--YFVKKKIEPTHVKIVE----------KGVTFKLGEFKVTPFGV 123 Query: 167 QHGRISSLGFRF--GNVAY--CTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H ++G++ G+V + TD+ E + ++L+I+A L G + Sbjct: 124 PHDSSDNVGYKVCYGDVVFVLMTDIGHITPEMQPYISEANYLVIEANHDVEMLSQGPYPQ 183 Query: 217 HF------------SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H + + + P K L H+ + ++ ++ + T Sbjct: 184 HLKMRILGPYGHLSNADCAQAIADDATPQLKKVWLCHLSEENNHPILAQKT 234 >gi|295398634|ref|ZP_06808659.1| beta-lactamase superfamily I metal-dependent hydrolase [Aerococcus viridans ATCC 11563] gi|294973122|gb|EFG48924.1| beta-lactamase superfamily I metal-dependent hydrolase [Aerococcus viridans ATCC 11563] Length = 271 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 79/240 (32%), Gaps = 54/240 (22%) Query: 38 TRSSLKISRVSERGS-----NTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHAD 87 R S+ S S + ++VD G + + + ID++ TH H+D Sbjct: 10 MRVSMLGSSSSGNATYIETPKRKILVDAGFSGKKMKELLAGINRDINEIDSLFITHEHSD 69 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ L +K ++VYA + + P+ V+E D Sbjct: 70 HIKGMG-----VLARKYDLNVYANEATWQAI----------GSKVGVIPVEKQHVMEQGD 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD- 202 + G ++ + H + F TD + L+N D Sbjct: 115 I-----LTLGDVDIVSYGVSHDAAEPQFYAFQKDDRQFTILTDTGYVSDRLIGLLKNSDS 169 Query: 203 FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 +LI +D L+ G + H S + I++I K L H+ + Sbjct: 170 YLIESNHDLDMLRMGAYPWSLKQRILGDEGHLSNDAGAQAMIDMIGDRTKRIYLGHLSKE 229 >gi|110668821|ref|YP_658632.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] gi|109626568|emb|CAJ53032.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Haloquadratum walsbyi DSM 16790] Length = 285 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 80/295 (27%), Gaps = 55/295 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+ + V + R ++ ++ ++ ++VD G Sbjct: 1 MRLTFLGTGSPMPV------------AD----RAQTGSLLTT---DNNDRALLVDCGSGV 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-------AAPDCM 115 ++ +V I +VL TH H DH+ L + + Y + Sbjct: 42 LQRLAATEVGYEDISSVLLTHHHIDHVT---DLLPLMKARWLAGETYLEIVGPAGTKRLI 98 Query: 116 KHLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP----ILQ 166 L E Y + + V IE + I I Sbjct: 99 DDLLEIHEYLSDQIELRIREVGPTEFTVTDFDIEARRTEHSVDGLAYRITEPTQEQDISA 158 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLS 221 S V + D A L+ D H + L+ Sbjct: 159 DAQSEESDADESATVVFSGDTEA-TNRIARLADGAAVLVHDCSFPDGVDVSGHPTPSQLA 217 Query: 222 ESLKKIELINPKNAILTHM------HVDLDYDMVLKSTPSRVVPAFDGMQFSSPI 270 L I LTH+ + + + + K V A DG+ + + Sbjct: 218 NVL---NGITVGRVYLTHLFPHTEGNHETMRERIQKKYDGEVRFARDGLTVTIDV 269 >gi|197284161|ref|YP_002150033.1| ribonuclease Z [Proteus mirabilis HI4320] gi|254808654|sp|B4EUI8|RNZ_PROMH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|194681648|emb|CAR40697.1| ribonuclease Z [Proteus mirabilis HI4320] Length = 305 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 95/292 (32%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A GVP + R +S+ + + + + D G Sbjct: 1 MELTFLGTNA--GVP----------SKD----RNVTSMVLDL--QNKQKSLWMFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPIDVYAAP------D 113 Q+L V I+ + TH H DHI G+ GL P+ +Y + Sbjct: 43 QHQILHSHVKLSRINKIFITHLHGDHIFGLPGLLC-SRSMGGTENPLTIYGPTGIKAFIE 101 Query: 114 CMKHLFESF-------------RYCFKALDDR------TYPPIVNPIVIENNDVPICMKS 154 L +S+ + F+ R ++P +E ++ P + + Sbjct: 102 TALTLSQSYLTYPLDIIEIEQDGFLFEEEGIRASCGALSHPVPCFGYRLEEDNKPGKLNA 161 Query: 155 AGGVIEAIPI-----LQQHGRISSL--GFRFGNVAYCT------------DVNAFPAESL 195 E IP L + G+ +L G Y + D P ++ Sbjct: 162 DKLETENIPRGPWYKLLKQGKTVTLPDGRIIDGKDYLSTEIKGRCIVIFGDTQPTP-NAV 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + +N D ++ +A H S ++ + + N K I+TH+ Sbjct: 221 KLAENADVIVHEATFKHDMADKANSRGHSSTIQAAELAKKANAKRLIITHIS 272 >gi|323488957|ref|ZP_08094194.1| ribonuclease Z [Planococcus donghaensis MPA1U2] gi|323397349|gb|EGA90158.1| ribonuclease Z [Planococcus donghaensis MPA1U2] Length = 314 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P ++ +S + ++ E T + D G Sbjct: 1 MQLLFLGTGA--GMPS---------------KQRNTSALVLKLLEE-RGTVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+LR V I+ + TH H DHI G+ GL G F + P+++Y +++ Sbjct: 43 QHQILRTTVKPRKIEKIFITHMHGDHIFGLPGLLGSRSFQAGEEPLEIYGPVGIKEYIQM 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + PIV + + +E + I S GFR Sbjct: 103 TL--------TLSRTHLTYPIVYHELSEGMIFEDELMTVETRLLDH---VIPSYGFRI 149 >gi|308492249|ref|XP_003108315.1| CRE-HOE-1 protein [Caenorhabditis remanei] gi|308249163|gb|EFO93115.1| CRE-HOE-1 protein [Caenorhabditis remanei] Length = 831 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 109/326 (33%), Gaps = 95/326 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T G ++ VP R + + +E +++D G Y Sbjct: 486 KITFFGTSSA--VPS--------------KYRNVTGYLVEASNES----ALLLDVGEGTY 525 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----------RPID 107 Q+ ++ ++++ VL TH H DH++G+ + ++K RP+ Sbjct: 526 GQMKAVFGEEGCKKLLVNLHCVLVTHAHQDHMNGLYTIVA---RRKEAFESLRIPYRPLV 582 Query: 108 VYAAPDCMKHLFESFRYCFKALDD----------------------RTYPPIVNPIVIEN 145 + + +K L ++ CF+ +++ P + +P + + Sbjct: 583 LVCNRNVLKPLK-TYSICFENIENLLEIVDISRHPLTPPGSPNGPPGKRPRLPSPHLPPS 641 Query: 146 NDV----PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEK 197 D+ P +E + +Q H + GF + + D E Sbjct: 642 RDILDDMPKSFDKNVWKLEELKAVQVHHTRMANGFVMRVAGKRIVFSGDTKPCDLLVAEG 701 Query: 198 LQNLDFLI----------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 Q+ D L+ DAL+ H ++ +++ + +N KN ILTH Sbjct: 702 -QDADVLVHESTFEDGHEEDALRKR----HSTMGQAVDVGKRMNAKNIILTHFSARYPKV 756 Query: 248 MVLKSTP-----SRVVPAFDGMQFSS 268 V P + A D ++ Sbjct: 757 PV---LPQYLDTENIGVAMDMLRVRF 779 >gi|307290253|ref|ZP_07570169.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|306498674|gb|EFM68175.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|315030437|gb|EFT42369.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4000] Length = 260 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 37/220 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G +++ L +DAV+ +H H DHI + L+ + +Q P Sbjct: 39 ESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHYHHDHIADLGVLQ--YYRQLYPTLE 96 Query: 106 ----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + +Y D + + V E + + A G Sbjct: 97 PTPILPIYG----------------HTQDQMHFKELTLSNVSEGKEYFEAEELAVGPFLI 140 Query: 162 IPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNG 212 + H ++ R + D + + A + ++ D + D N Sbjct: 141 TFMETIH-PVTCYAMRIVEKATGKVFVFTGD-SGYLASFEDFAKDADLFLADTYLFEGNE 198 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H +HF+ E+ + + K +LTH+ + + + Sbjct: 199 RHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREE 238 >gi|253999237|ref|YP_003051300.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylovorus sp. SIP3-4] gi|253985916|gb|ACT50773.1| coenzyme PQQ biosynthesis protein B [Methylovorus sp. SIP3-4] Length = 305 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 95/314 (30%), Gaps = 63/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG GA G P+ + CD RRT+SS+ +S V+ +T Sbjct: 1 MQIHVLGAGAGGGFPQWNCNCPNCDGLRKGTIKAKRRTQSSICVSGDGINW----VLFNT 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I ++ DH G+ LR +K+ +++ Sbjct: 57 SPDILQQIQEFPPLQPARAIRDSGIVGIVLIDAQIDHTTGLLMLREGQVKR----EIWCT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI------PI 164 + L Y + + + + + A A+ P Sbjct: 113 DMVYQDLTTGNPLL---NILGHYCGVNHHPIAVDGQTTFEIPGAANLRFTAVALKSAAPP 169 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIID------- 207 H G G + Y + L+ D +++D Sbjct: 170 YSPHRNDPHPGDTIGVLIEDTKTGKKCWYSPGLGEIEPHLPPLLEQADCIMVDGTFWTNT 229 Query: 208 -----ALKNGLHSSHFSLSESLK--KIELINP-KNA--ILTHMHVDL-----DYDMVLKS 252 L S L +S + +E ++P K A +L H++ D + Sbjct: 230 EMIDMGLMTKTARSIGHLPQSGEGGMMEALSPYKKARKVLIHINNTNPILREDSAERAEL 289 Query: 253 TPSRVVPAFDGMQF 266 + A+DGM Sbjct: 290 ERHGIEVAYDGMDI 303 >gi|108757191|ref|YP_632389.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108461071|gb|ABF86256.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 277 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 69/225 (30%), Gaps = 25/225 (11%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQ 102 V R + +I D G L + + + +H H DH+ G+ +L Sbjct: 30 CVEVRCGDELLIFDLGTGARALGHALVAKKKPVKGSIFISHYHYDHLQGLPFFGPMYLPT 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY + + + V + D+ G Sbjct: 90 -SDLTVYGPARHGQSVKQLLSGQMVPPYFPVTADGVFRAQLTYTDLAATQTLKLGPATVH 148 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDV---NAFPAESLEKLQNLDFLIIDAL------ 209 I H ++G+R +V Y TD+ + A Q+ D LI DA+ Sbjct: 149 TIELNHPG-GNMGYRVECQGRSVVYATDLEHGSDMDAAFYAFAQDADVLIYDAMYTEDEY 207 Query: 210 --KNGLHSS---HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + G + H + ++ + K +L H D D Sbjct: 208 HGRTGPARTGWGHSTWQAAVHAADEAGVKKLVL--FHHDPSRDDA 250 >gi|251783386|ref|YP_002997691.1| metal-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392018|dbj|BAH82477.1| metal-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 259 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L++DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLNLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRNEFAKLSIPDVSEGRAYDVTGVEQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|289581539|ref|YP_003480005.1| ribonuclease Z [Natrialba magadii ATCC 43099] gi|289531092|gb|ADD05443.1| ribonuclease Z [Natrialba magadii ATCC 43099] Length = 309 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 84/300 (28%), Gaps = 80/300 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG + VP R S + ++R E ++ D G Sbjct: 3 LRVTFLGT--AGAVPTTN--------------RNPSGIHVAREGEE-----LLFDAGEGI 41 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE- 120 Q++R SI + TH H DH+ GI GL F ++ P+ V+ + L Sbjct: 42 QRQMMRFGTGFSISHLFVTHLHGDHVLGIPGLLQTMDFNDREEPLAVHTPHGTRRQLKGL 101 Query: 121 --------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------------- 159 SF + D + I +S G + Sbjct: 102 VNALGNRPSFPVRINEVGDGDVAYRADEYEIRAFGTDHDTRSVGYALVEDDRKGRFDREH 161 Query: 160 ----------------EAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEK 197 P+ + G + G ++ Y D ++E Sbjct: 162 AEELGVPVGPKFSKLHNGEPVELEDGTVVDPEQVVGEPRPGRSLVYTGDTRP-TVATIEA 220 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH-----VDLDY 246 D LI DA ++H + ++ + K L H+ D+ Sbjct: 221 ADEPDLLIHDATFAEDRADRAAKTAHSTAQQAAEIATRAGAKRLALMHISSRYAGHTGDH 280 >gi|126696873|ref|YP_001091759.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9301] gi|166991494|sp|A3PEI3|RNZ_PROM0 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|126543916|gb|ABO18158.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. MIT 9301] Length = 312 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNITFLGT--SSGVPSLT---------------RNVSSLALKLSQSSEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I +Y + Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSEGIQIYGPSGLRSFINS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + F L ++P +N + +EN + I+ +H +I + G+R Sbjct: 102 SLKSSFCKL---SFP--LNFVEVENFASENKILFENNKIKVNCACLKH-KIPAYGYRV 153 >gi|317477057|ref|ZP_07936299.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] gi|316906850|gb|EFV28562.1| metallo-beta-lactamase superfamily protein [Bacteroides eggerthii 1_2_48FAA] Length = 267 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 53/230 (23%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHI---HGIDGLRGYFLKQKRPID 107 +++D G + L+E + I AV TH HADHI G+ I Sbjct: 26 ILIDAGIAVRTIKKGLKEAGINMEMIRAVFVTHDHADHIKAVGGLGEKLN--------IP 77 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + +S+ K Y P+ +E+ Sbjct: 78 IYTTARIHEGINKSYCMTEKLHSSVRYLEKQQPMQLED-------------FRIESFEVP 124 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H ++G+ ++ TD+ + + + ++LI++A L+ G + Sbjct: 125 HDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAQYICKANYLILEANYDDEMLRMGSYPQY 184 Query: 216 ---------SHF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H ++ + E I + L H+ D ++ + T Sbjct: 185 LKERITSRTGHMSNIDTAEFLAENITEHLQYIWLCHLSKDNNHPELAYKT 234 >gi|300703243|ref|YP_003744845.1| arylsulfatase [Ralstonia solanacearum CFBP2957] gi|299070906|emb|CBJ42208.1| putative arylsulfatase (Aryl-sulfate sulphohydrolase) [Ralstonia solanacearum CFBP2957] Length = 321 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 81/264 (30%), Gaps = 51/264 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G PT KNR + + + + + +VD G Sbjct: 44 RLILLGTGG--------------GPTPKKNRSAPAQVIVI------NGVSYVVDCGNGVA 83 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKHL--- 118 Q + + +I V TH H+DH G L + P+D + P Sbjct: 84 RQYVSAGLKLKAIRHVFITHQHSDHNADYGALMLLAWGTDLTGPVDTWGPPPLAAMTTKF 143 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 E + Y + P + P++ + + ++ L +H + + +R Sbjct: 144 LELYDYDIRTRIADEGRPPLAPMLHPHELTEAGLVMQDANVKVTSALVEHPPVSPAFAYR 203 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLI--------ID----------ALKNGLHS 215 F ++ D + D L+ +D L+ L + Sbjct: 204 FDAADRSIVISGDTAP-SENLVRLAYGADVLVHEVMHLPSLDQLLSTERNAKTLREHLLA 262 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 SH E + K +L+H Sbjct: 263 SHTPAEEVGRIATEAKVKTLVLSH 286 >gi|56696387|ref|YP_166744.1| pyrroloquinoline quinone biosynthesis protein PqqB [Ruegeria pomeroyi DSS-3] gi|61214683|sp|Q5LTB1|PQQB_SILPO RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|56678124|gb|AAV94790.1| coenzyme PQQ biosynthesis protein B [Ruegeria pomeroyi DSS-3] Length = 295 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 90/301 (29%), Gaps = 47/301 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G+P+ C R R S + S + I++ PD Sbjct: 1 MKIVVLGAAAGGGLPQWNCGCVNCSDARA--GRLRPSGQSSLAVSADGSRWSILNASPDI 58 Query: 65 YMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+ VL + +VL T+ DHI G+ L+++ P D++A + Sbjct: 59 RQQMQDRSVLHPQGLRGSPVASVLVTNGDIDHIAGL-----LSLREQTPFDLFATAGIHE 113 Query: 117 HLF--ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL-QQHGRI-- 171 L F + R + +P + + + G V + G I Sbjct: 114 VLEGNRIFDALARDKVARRPVALESPFALHDGLEAMLFAVPGKVPLFMEGESVDTGLIGE 173 Query: 172 SSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL-----------------K 210 ++G R + Y P + L +L + L+ D + Sbjct: 174 QTVGVRLSDGRNTAYYIPGCAYVPDDLLHRLSDAGHLLFDGTLWDDDEMIRSGTGIKTGR 233 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV----LKST-PSRVVPAFDGMQ 265 H SL ++ + H++ A DG++ Sbjct: 234 RMGHIPISGPDGSLVRLAGLAADKTY-IHINNTNPVWRAGSAERAELARRGWQVAHDGLE 292 Query: 266 F 266 Sbjct: 293 I 293 >gi|222152722|ref|YP_002561899.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222113535|emb|CAR41326.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 269 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+ TH H+DHI G+ L +K + Sbjct: 25 PKKKILVDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + L DDR ++ + + G I+ Sbjct: 80 DVYANEKTWQIL-----------DDRNMIGKIDVSQKHVFERDKMITF--GDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +RF + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAYDPQFYRFMKDNKSFVMLTDTGYVSDRMSGIIENADAYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + + Sbjct: 187 SLKQRILSDKGHLSNEDGAGAMIRSMGNKTKKIYLGHLSKENNIKELAHMTMENQL 242 >gi|20808969|ref|NP_624140.1| beta-lactamase superfamily hydrolase [Thermoanaerobacter tengcongensis MB4] gi|20517634|gb|AAM25744.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Thermoanaerobacter tengcongensis MB4] Length = 259 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 29/165 (17%) Query: 53 NTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++VD G +L V I A+L TH H DHI G L ++ I Sbjct: 21 DVHLLVDAGLTGRTIEKALLNIGVHPEQISAILITHEHKDHILG-----AGVLSRRYDIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA + + + ++R Y + G I+ P + Sbjct: 76 IYANKATWEAMERDVKEI--KEENRLY-------------FVTGEEFEIGEIKIKPFKKP 120 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +GF F ++ TD+ L D ++++A Sbjct: 121 HDAAEPVGFSFKAGGKKISIATDLGYMTRGVAYNLMESDLILLEA 165 >gi|271963271|ref|YP_003337467.1| metal-dependent hydrolase [Streptosporangium roseum DSM 43021] gi|270506446|gb|ACZ84724.1| Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Streptosporangium roseum DSM 43021] Length = 250 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 31/219 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----- 103 +++D G + R + +DA+ +H HADH L Y + + Sbjct: 25 EAEGFRMLLDFGNGALGALQRHIGLYDVDAICLSHLHADHCL---DLCPYHVVRTYSPRG 81 Query: 104 --RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + V+A D + L ++ D+ + + + G + Sbjct: 82 PLPRVPVHAPADAPRRLAAAYGM----PDEPGLETAFDFARLTPGVFEV------GPFQV 131 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLH 214 H + + GFR +VAY D AE ++ D L+ +A + GL Sbjct: 132 TAARMNH-PVETYGFRVSYGGRSVAYSGDTGE-SAELVKLASGADVLLCEASFLERPGLP 189 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + H + ++ + + +LTH+ D + +L+ Sbjct: 190 AGLHLTGRQAAEHAARADVGTLVLTHLVPWYDREQILQE 228 >gi|327191096|gb|EGE58147.1| hydrolase protein, beta-lactamase superfamily [Rhizobium etli CNPAF512] Length = 276 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R N ++ D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGNHRMLFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + S IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLSPHEGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 H ++G+R ++A D+ P SLE +Q D ++ D Sbjct: 150 IKTFTLNHPG-GAIGYRIEWQGRSIALIYDIEHIPGSYDPVSLEMMQGADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKMAGAKRFALFH 241 >gi|78066868|ref|YP_369637.1| Beta-lactamase-like [Burkholderia sp. 383] gi|77967613|gb|ABB08993.1| Beta-lactamase-like protein [Burkholderia sp. 383] Length = 258 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 78/251 (31%), Gaps = 59/251 (23%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L + +DAVL TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIGDLDAVLITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + A Sbjct: 69 ALTLARRGSLPLYMSWGTARAV------------------GADEADVDLHVLWGDETVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + +P H L F F + TDV L D L++++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGASRLGVLTDVGMATPHITAVLSGCDALVLESNHDT 170 Query: 209 -------------LKNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKS 252 + G + H S + L +E K+ + H+ + Sbjct: 171 AMLASSRYPQSLKARIGGNHGHLSNDAAADILASLERSRLKHLVAAHLSQ-------QNN 223 Query: 253 TPSRVVPAFDG 263 P V AF G Sbjct: 224 LPELVRQAFGG 234 >gi|327398340|ref|YP_004339209.1| beta-lactamase domain-containing protein [Hippea maritima DSM 10411] gi|327180969|gb|AEA33150.1| beta-lactamase domain protein [Hippea maritima DSM 10411] Length = 256 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 78/228 (34%), Gaps = 33/228 (14%) Query: 58 VDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-----RGYFLKQKRPIDVYA 110 +D GP ++ ++ ++ + V +H H DH I+ + G K+ + Y Sbjct: 45 IDPGPGALVEAIKHKLYPSKLSGVFLSHRHLDHSADINAIIESMTEGGHKKRGTVLAPYE 104 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + + R F ++ + V+ + IE + G + Sbjct: 105 ATEVDPVILHYNRKNFHLINQTEFSTYEVDGVKIEVKAKHLHTTETYGAV---------- 154 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--KNGLHSSHFSLSESLKKI 227 F A+ D F L +L D +I++ + H S + K + Sbjct: 155 ----FSFSSHKFAFIPDTLYFDD--LSELYRADIVIMNTVFCHTRPGFKHLSSDDVCKFL 208 Query: 228 ELINPKNAILTHMHVDLDYDM-------VLKSTPSRVVPAFDGMQFSS 268 E PK I+TH + + + T VV A+DGM Sbjct: 209 EKHRPKKLIMTHFGLSFLKEKPWEVAKQIASETGVDVVAAYDGMVVEL 256 >gi|113955240|ref|YP_731447.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Synechococcus sp. CC9311] gi|123327647|sp|Q0I7X5|RNZ_SYNS3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|113882591|gb|ABI47549.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Synechococcus sp. CC9311] Length = 315 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 83/309 (26%), Gaps = 106/309 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R SS+ + + D G Sbjct: 1 MQVTFLGT--SSGVPTRG--------------RNVSSVALRLPQRSEL---WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q LR + + V TH H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRCDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLGSTSNGVDLYGPDPLDAYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 R + YP ++ + + + ++ A P+ R+ + + Sbjct: 102 VLR---TSSTRIGYPLAIHRVREAAEQNTVVFEDDDLIVTAAPLNH---RVPAYAYRAEQ 155 Query: 177 -----RFG---------------------------------------------NVAYCTD 186 RF +V YCTD Sbjct: 156 KPRAGRFDIDKARELQIPPGPVYAALKRGESVTLDDGRTIDGRTLCGPEQPGVSVVYCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 F +++ Q D LI H S H + + + + Sbjct: 216 TV-FCEAAVQLAQGADLLI--------HESTFSHAEADMAFKRQHSTSTMAAQTAAEAGV 266 Query: 233 KNAILTHMH 241 K LTH+ Sbjct: 267 KQLALTHLS 275 >gi|160880930|ref|YP_001559898.1| beta-lactamase domain-containing protein [Clostridium phytofermentans ISDg] gi|160429596|gb|ABX43159.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg] Length = 264 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 53/234 (22%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T ++VD G +L V S+D +L TH H+DHI GI L ++ + Sbjct: 20 NETNLLVDAGVSGKRIESGLLSAGVDPNSLDGILITHEHSDHIQGIG-----VLARRYKL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS---AGGVIEAIP 163 +Y + + + + + IE + + G I P Sbjct: 75 PIYGTVETINAMLR----------------LSSVGRIEESQLRFVKPDEALCIGDILVEP 118 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + + + F N + TD+ + + ++ KL + L ++A L G Sbjct: 119 FSISHDASNPVCYTFTNGGHKIGMATDLGTYDSYTISKLCGAEVLYLEANHDVNMLMVGS 178 Query: 214 HSSHFS---LSESLKKIELINPK-----------NAILTHMHVDLDYDMVLKST 253 + H L E + K + +L HM + +Y + T Sbjct: 179 YPYHLKQRILGERGHLSNETSAKLICELLHDDLQHVLLAHMSKENNYAELAFET 232 >gi|313200387|ref|YP_004039045.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|312439703|gb|ADQ83809.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 255 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 96/253 (37%), Gaps = 47/253 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S G I G N RT +SL + + +++D G Sbjct: 1 MQVKVLGC--SGG---IGG-----------NLRT-TSLLV--------DDDILIDAGTGV 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFR 123 + EQ+ ID V TH H DHI + + ++ P+ +YA P+ + L Sbjct: 36 GDLSI-EQMARIDHVFLTHSHLDHIACLPLMLDTVAGLREAPVTIYALPETLHALKT--- 91 Query: 124 YCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 + F D + P ++ +V + P+ H + ++G+ Sbjct: 92 HIFNWIIWPDFSAVPSETSPLLRYAEVAQGKAVSLSGRSITPLPANH-TVPAVGYWLDSG 150 Query: 180 --NVAYCTDVNAFPA--ESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIEL 229 ++ + D A E + +++NL +L+I+ L S H S + ++ Sbjct: 151 ANSMVFTGDTTTCDALWEQVNQIENLKYLLIETAFGNENLALAQASKHLSPILLIDELMK 210 Query: 230 INPKNAILTHMHV 242 + K +LT++ Sbjct: 211 L--KQQVLTYITH 221 >gi|146302270|ref|YP_001196861.1| ribonuclease Z [Flavobacterium johnsoniae UW101] gi|146156688|gb|ABQ07542.1| ribonuclease Z [Flavobacterium johnsoniae UW101] Length = 301 Score = 64.4 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 99/331 (29%), Gaps = 97/331 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ +S + N ++D G Sbjct: 1 MKLTILG----------------CYAATPRTLTNPTSQVLEI-----KNRLFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ + ++ I+ + +H H DH++G+ G F R + +Y + + Sbjct: 40 QVQLRKNKIKFSKINHIFISHLHGDHLYGLIGTISTFSLLGRTTDLHIYGPKGIKELILL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + L + + +E+ + + + ++ IP+ R+ + G+ F Sbjct: 100 QLK-----LTESWTTYDLFFHELESKESEVIFEDKRVIVRTIPLKH---RVYTNGYLFQE 151 Query: 181 ------------------VAY-----------------------------------CTDV 187 VAY C+D Sbjct: 152 KPDERKLNVEAVQSYDIHVAYYQKIKNGSDITLDNGTVVENHKLTFDPPPSKSYAFCSDT 211 Query: 188 NAFPAESLEKLQNLDFL-----IIDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMH 241 + + +QN D L +++ + H + E+ N K IL H Sbjct: 212 V-YNEAVIPIIQNTDVLYHESTFLESEAPLALKTLHSTAKEAAAIALKANVKQLILGHYS 270 Query: 242 VDLD----YDMVLKSTPSRVVPAFDGMQFSS 268 D + ++ V+ A DG+ F Sbjct: 271 TRYDGIERFKEEAETVFPNVLLADDGLSFEL 301 >gi|297618206|ref|YP_003703365.1| beta-lactamase [Syntrophothermus lipocalidus DSM 12680] gi|297146043|gb|ADI02800.1| beta-lactamase domain-containing protein [Syntrophothermus lipocalidus DSM 12680] Length = 245 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 85/281 (30%), Gaps = 53/281 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC A PR+ R TV+++ G Sbjct: 1 MELTILGCWAPY--PRVGEACP-------------------GYLIRTEKATVLLECGHSV 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK------RPIDVYAAPDCMKH 117 + + + +D V+ +H H DH + R K P+ + Sbjct: 40 FSVLQKYQDFKHLDLVVISHFHPDHYVDLYAFRHALRATKMLGQRSEPLRL----LVPAQ 95 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + F Y + + R +E P+ ++ + I + R Sbjct: 96 PVDMFNYWYSTEEFR----------VEPIACPVEVRDIKLSFVPVLHTMPGYMIVAEDQR 145 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELIN 231 + Y D + ESL D L+ +A + + H + E+ + Sbjct: 146 GHRLVYSGDTDYI-EESLGAAAGADVLLAEASILDRDREYARKAKHLTAKETGRWANWCR 204 Query: 232 PKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 K +LTH + D + S +V A +G++ Sbjct: 205 AKKLVLTHFWPEYDLKEIEAEARSEYSGELVLAREGLKVEI 245 >gi|187932604|ref|YP_001884819.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187720757|gb|ACD21978.1| metallo beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 357 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 25/194 (12%) Query: 52 SNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + L++ + ID V+ THPH+DHI G+ + F I Sbjct: 65 DGKNILIDAGNNDSMAYNYLKQLGIKKIDYVMITHPHSDHIGGMTQIINEF-----DIGE 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY----PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + AP H ++F KAL + P + + I N + ++ Sbjct: 120 FYAPKV-NHTTKTFENMIKALQSKGIKLTAPTPGDTLNIGNATLQFLAPNSAK------Y 172 Query: 165 LQQHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + + ++GN +Y D A + + LD D LK G H SH S S+ Sbjct: 173 EDMNNYSIACKLKYGNTSYVFMGDAEALSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQ 230 Query: 223 SLKKIELINPKNAI 236 + ++ +NP+ AI Sbjct: 231 T--FLDKVNPRYAI 242 >gi|329297636|ref|ZP_08254972.1| pyrroloquinoline quinone biosynthesis protein PqqB [Plautia stali symbiont] Length = 262 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 46/128 (35%), Gaps = 22/128 (17%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG AS G P+ + C RT+SS+ +S V+ + PD Sbjct: 5 VLGSAASGGFPQWNCNCANCSGLRNGTIQAQARTQSSIIVSDNDTDW----VLCNASPDI 60 Query: 65 YMQVLR------EQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ R VL I +++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQIARTPELVKHGVLRGTAIGSIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFR 123 L F Sbjct: 116 ADLTSGFP 123 >gi|221633768|ref|YP_002522994.1| metallo-beta-lactamase family protein [Thermomicrobium roseum DSM 5159] gi|221156032|gb|ACM05159.1| metallo-beta-lactamase family protein [Thermomicrobium roseum DSM 5159] Length = 553 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 43/217 (19%) Query: 53 NTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N +++D G F + LR +++ + A+L TH H DHI GI + Sbjct: 28 NDLIVIDAGAKFPEEDLRGVDLIIPDVGYIKQRLNKLRAILLTHGHEDHIGGISFILNE- 86 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 K P+ +Y + + Y L+D + P + + V+E P G Sbjct: 87 FKSIAPVPIYGSELAIA-------YARAKLEDYSDPKLADFRVVE----PRKRYRLGQHF 135 Query: 160 EAIPILQQHGRISSLGFR----FGNVAYCTDVNAFP---------AESLEKL--QNLDFL 204 E I H S G V + D P E L++L + + L Sbjct: 136 EVEFIPVTHSIPGSYAIALKTPLGWVVHTGDYKFDPTPPLGPRTDEERLKQLGREGVLVL 195 Query: 205 IIDAL---KNGLHSSHFSLSESLKKIELINPKNAILT 238 + DA+ + G S +SE+L +I +LT Sbjct: 196 LSDAVRVERPGHTPSEAVVSETLDRIIGAAEGRVVLT 232 >gi|323340876|ref|ZP_08081127.1| ribonuclease Z [Lactobacillus ruminis ATCC 25644] gi|323091727|gb|EFZ34348.1| ribonuclease Z [Lactobacillus ruminis ATCC 25644] Length = 313 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 34/181 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + +N+ + D G Sbjct: 1 MEIEFLGTG-----------------AGSPSKFRNVSSLVLKLLDE-NNSVWMFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYAAPDCMKHL 118 Q+LR + +D + TH H DH+ G+ G R + ++ RP+ +Y ++ Sbjct: 43 QHQILRTTIRPRKVDKIFITHLHGDHLFGLPGFLSSRSFQTGEETRPLTIYGPKGIASYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + +YP +E D + +E + RI G+R Sbjct: 103 KASMQ---VTQTRLSYP----LKFVELTDEGTVFEDDKFKVECRFLEH---RIQCFGYRI 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|168335418|ref|ZP_02693509.1| beta-lactamase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 263 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 78/222 (35%), Gaps = 50/222 (22%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSID--AVLYTHPHADHIHGIDGLRGYFLKQK 103 + ++VD G QV+ + V +D A+ TH H DHI G+ F +K Sbjct: 20 KAGKARILVDIGISV-TQVIAKLKQIGVDPVDITAIFITHEHDDHIKGVG-----FFSRK 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +YA + + V I I + VP+ + V+ Sbjct: 74 FGTPIYATQKTWDVILA-----------KELMGKVTNIKIIDVAVPVLIA---NVLRIKA 119 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H + +G+ F + Y TD + +L + + ++ ++ L+ G Sbjct: 120 FSISHDTVDPVGYVFNTTTKKIGYLTDCGTIDQNIVSELSDCNGIVLEFNHELNLLEVGK 179 Query: 214 HS-----------SHFSLSESLKKIELINPKN---AILTHMH 241 + H S ++ K + + KN AIL H+ Sbjct: 180 YPYFLKKRIASNIGHLSNDDAAKLLLDVYHKNLKWAILAHIS 221 >gi|324504826|gb|ADY42080.1| Ribonuclease Z [Ascaris suum] Length = 878 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 109/323 (33%), Gaps = 93/323 (28%) Query: 23 GDWGACDPTNPKNRRTRSSLKI--------SRVSERGSNTTVIVDTGPDFYMQVLR---- 70 + C P+ +S + + + +++V+VD G Y Q LR Sbjct: 502 CNCTECSNDMPRISFLGTSSAVPSKYRNVSGYLLQLSESSSVMVDCGEGSYGQ-LRVLFG 560 Query: 71 -----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----------RPIDVYAAPDCM 115 E +LS+ A+ TH H DH++G+ + L++ RP+ + + + Sbjct: 561 VERCLEILLSLKAIFITHAHQDHMNGLYTMI---LRRHEAFLAKGVEYRPLVLVCNFNVL 617 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------------------- 156 L ++ CF L+ P++N + I N + G Sbjct: 618 NPLR-TYSRCFCDLE-----PLINVVNISNRSPVFRTRGDGRNHLRRGDDSRLSGIMDIV 671 Query: 157 -------------GVIEAIPILQQHGRISSLGFRF-----GNVAYCTDVNAFP-AESLEK 197 G+ + + + H R+ + GF F + + D P +E Sbjct: 672 KLMPRSLFDKVEWGLTDILAVQVHHTRM-ANGFVFINSDGRKIVFSGDTK--PCDLLVEH 728 Query: 198 LQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 N D LI +A H H ++ +++ ++ K+ IL+H Y V Sbjct: 729 GMNADLLIHEATFEDDHERDAAFKKHSTMKQAVDVGVRMHAKHIILSHFSAR--YPKVPA 786 Query: 252 STPS------RVVPAFDGMQFSS 268 P V A D + Sbjct: 787 -LPDYLDSAGNVSVAVDNLSVRF 808 >gi|302525413|ref|ZP_07277755.1| beta-lactamase domain-containing protein [Streptomyces sp. AA4] gi|302434308|gb|EFL06124.1| beta-lactamase domain-containing protein [Streptomyces sp. AA4] Length = 245 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 32/220 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR 96 R S R +T + +D GP L+E V ++DA+ +H HADH+ L Sbjct: 16 RPDAPCSGYLVRRDDTAIWLDAGPGTLA-ALQEHVSPTALDAIWISHLHADHVA---DLL 71 Query: 97 GYFL-------KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++PI +Y P + +A + + +V Sbjct: 72 PAVYALLFADLTLRKPIPLYGPPGTAARISAFLSNTGRAPIEEAF---------SVREVH 122 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL-QNLDFL 204 ++ G + + HG + G R + AY D P ++L +L + D Sbjct: 123 DGHQTRVGGLRLETVAVSHG-FPAFGVRITDGERTFAYSGDTG--PCDALSQLAEGTDLF 179 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 + +A + H + +E+ + +LTH+ + Sbjct: 180 LCEADSIEPSAEHLTPAEAGRAAAGAA--RLVLTHLGHTV 217 >gi|167461320|ref|ZP_02326409.1| hypothetical protein Plarl_01958 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 291 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 41/219 (18%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD G Q++ E+ ++A+ TH H+DHI G+ L +K Sbjct: 43 DTGETKLLVDAGLSAKKLEQLMEERGVSGQELNAIFVTHEHSDHIKGLGALS-----RKH 97 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + L + + + + + EN I ++S G +A Sbjct: 98 QLPIYANQKTWEQLDKYIGTI--TDEHKRFMETGTSVEFEN----IRIESYGISHDAA-- 149 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS--- 215 + G I G R ++A TD+ ++ +K+ + D LI++ L+ G + Sbjct: 150 -EPVGYILYQGSRKLSIA--TDLGYMSSKVKDKIGDSDALILETNHDIEMLRVGHYPWNI 206 Query: 216 --------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S + + + I K+ + H+ D Sbjct: 207 KRRILSDIGHLSNEAAGEALCDILTEKTKSVYMAHLSRD 245 >gi|156093498|ref|XP_001612788.1| metallo-beta-lactamase domain containing protein [Plasmodium vivax SaI-1] gi|148801662|gb|EDL43061.1| metallo-beta-lactamase domain containing protein [Plasmodium vivax] Length = 828 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 20/124 (16%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + + LG G P R SS + + ++ N + D G Sbjct: 322 RSNWRLIFLGTG----------------SMYPSTNRGTSSFLLQTIKKKC-NEAFLFDCG 364 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 + ++ + R + I+ + TH H DH G+ + L+ I++Y + L Sbjct: 365 ENTFIALQRANIKMSKINNIFLTHLHGDHCLGLISVLT-MLRNSSAINIYGPEGTHRFLR 423 Query: 120 ESFR 123 +F Sbjct: 424 STFS 427 >gi|320527765|ref|ZP_08028934.1| metallo-beta-lactamase domain protein [Solobacterium moorei F0204] gi|320131845|gb|EFW24406.1| metallo-beta-lactamase domain protein [Solobacterium moorei F0204] Length = 273 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 70/220 (31%), Gaps = 63/220 (28%) Query: 51 GSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 T V++D G L+ + +DAVL TH H+DHI +K Sbjct: 20 DGTTKVMIDCGTTKKYLFEHLKELQISLDDLDAVLITHNHSDHIS--------QIKHFAS 71 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y+ + P ++ ++ + PI Sbjct: 72 LPIYSPIE---------------------IPKIDTFYVKPGSA-----FTIETLRFTPIA 105 Query: 166 QQHGRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIID----------ALKN 211 H ++++G+ + Y TD + + ++++ D+++++ + Sbjct: 106 LSHDALNTVGYIVENGIEKLVYITDTGYINEKHIPRIKDADYIVLESNHDVQMLMATSRP 165 Query: 212 GLHS-------SHFSLSESLKKIELINPKNA---ILTHMH 241 H + ++ I + IL H+ Sbjct: 166 QFTKQRIYSDTGHLCNEDCAAVLDKIVTEKTKMIILAHLS 205 >gi|289168017|ref|YP_003446286.1| protein VicX [Streptococcus mitis B6] gi|288907584|emb|CBJ22421.1| conserved protein VicX [Streptococcus mitis B6] Length = 269 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVILTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|298530170|ref|ZP_07017572.1| beta-lactamase domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509544|gb|EFI33448.1| beta-lactamase domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 255 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 18/211 (8%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR 96 +S+ + V E ++ + ++D G + L +DA+ +H H DH G+ L Sbjct: 20 NTSILVQ-VKEDKNSRSALLDCGFTAASAFWGCSDDPLDLDAIWISHLHGDHFLGLPQLL 78 Query: 97 GYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 F + +P+ + + ++ + DR IE + Sbjct: 79 LRFSEHARIKPLQISGVCGASSAVKQAMELAYPGKWDRLG------FEIEFTEASSRDTF 132 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++A + +H + SLG + ++ Y D L D I +A Sbjct: 133 QLAGMQARAVPMEH-PVPSLGIKLHAENRSLFYTGD-GRLEKSFWPVLDGCDLAICEAFA 190 Query: 211 NGLH-SSHFSLSESLKKIELINPKNAILTHM 240 H S+S L L + L HM Sbjct: 191 LEGDMPGHSSVSRVLSMAGLAGVRQTALVHM 221 >gi|188590721|ref|YP_001921478.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188501002|gb|ACD54138.1| metallo beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 360 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 86/214 (40%), Gaps = 28/214 (13%) Query: 52 SNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + L++ + +D V+ THPH+DHI G+ + F I Sbjct: 65 DGKNILIDAGNNDSMAYNYLKKLGIKKLDYVMATHPHSDHIGGMTQIINEF-----DIGE 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY----PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + AP + H ++F KAL + P + + + + N + ++ Sbjct: 120 FYAPK-INHTTKTFENMVKALQSKGIKLTAPTVGDTLNVGNATLQFLAPNSAK------Y 172 Query: 165 LQQHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + + ++GN +Y D + + + LD + LK G H SH S S+ Sbjct: 173 EDMNNYSIACKLKYGNTSYVFMGDAESLSEGEI-LAKQLDI-SANVLKLGHHGSHSSTSQ 230 Query: 223 SLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + ++ +NP+ AI++ + + L Sbjct: 231 A--FLDKVNPRYAIVSCGKNNDYGHPHQETLNKL 262 >gi|148264120|ref|YP_001230826.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146397620|gb|ABQ26253.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 256 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 71/239 (29%), Gaps = 57/239 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I T +++D G + + IDAVL +H H DHI G Sbjct: 14 SLFIET-----GGTKLLIDAGLSAVEILRRLNAIGVDGGEIDAVLISHEHTDHIRG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K + V + K F+ + Y Sbjct: 65 -AGVLARKFKMPVLLSYPTYKEAERCFKKTEVVEFESGYA------------------FC 105 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 I P H +GF G V TD+ +KLQ LI+++ Sbjct: 106 YKDISIDPFPITHDACDPVGFVIKSNEGTVGIATDLGIATRLVKDKLQGCKVLILESNHD 165 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAF 261 L NG + H + I ++ H+ + ++ + V A Sbjct: 166 ETMLLNGPYPWH--------LKQRIKSRHG---HLSNNDSAALLEEILHSGLEGVFLAH 213 >gi|171056881|ref|YP_001789230.1| beta-lactamase domain-containing protein [Leptothrix cholodnii SP-6] gi|170774326|gb|ACB32465.1| beta-lactamase domain protein [Leptothrix cholodnii SP-6] Length = 258 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 77/218 (35%), Gaps = 45/218 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGC S I D +S + N V++D G Sbjct: 1 MNLRVLGCSGS-----IALDCRT------------TSFLL--------NDRVLIDAGTGV 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK------RPIDVYAAPDCMKHL 118 L E + ID +L +H H DH+ GI L ++++ +PI V+A P + L Sbjct: 36 GDLALDE-LAQIDHILISHSHLDHVLGIPLLADSVMQRRLAREDYKPIQVHALPATIDAL 94 Query: 119 FESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + F D T P +IE + + + + + + H + + GF Sbjct: 95 RR---HIFNNVIWPDFTRLPTPERPIIELVTLEVGQRLSLCNLPIEVLPASH-TVPACGF 150 Query: 177 ----RFGNVAYCTDVNAFPAESLEKLQNLDF--LIIDA 208 G Y D PA + L+ L+I+ Sbjct: 151 GVATTSGWWIYTGDTGPNPAL-WQTLRGRRIAQLVIET 187 >gi|146296222|ref|YP_001179993.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409798|gb|ABP66802.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 265 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 83/237 (35%), Gaps = 53/237 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFY-MQVLREQV---LSIDAVLYTHPHADHIHGIDGLRG 97 + IS +TT++VD G F + ++ IDA+L +H H+DH+ Sbjct: 19 ILISY-----KDTTILVDAGVSFRKLTCALNKIGFNKQIDAILLSHDHSDHV-----KCA 68 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +K + + + + S +D+R N +IE + G Sbjct: 69 GVYFRKLNVPIITNYKTWEAVKNSLG----KVDER------NVHLIETG-----TSFSVG 113 Query: 158 VIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----- 208 I H +GF F ++ TD+ +K+ D ++++A Sbjct: 114 SIGIDTFSIPHDAKDPMGFCFYLGRKKISISTDLGHVNENVAQKIDFSDIILLEANHDIE 173 Query: 209 -LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMVL 250 L G + H S ++ + I +N K L H+ + ++ V Sbjct: 174 MLLTGPYPYYLKQRIKSDIGHLSNEQAAQMILKLNLERTKRIYLGHLSEENNHPDVA 230 >gi|124087806|ref|XP_001346883.1| Ribonuclease Z [Paramecium tetraurelia strain d4-2] gi|145474861|ref|XP_001423453.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057272|emb|CAH03256.1| Ribonuclease Z, putative [Paramecium tetraurelia] gi|124390513|emb|CAK56055.1| unnamed protein product [Paramecium tetraurelia] Length = 674 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 88/263 (33%), Gaps = 47/263 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K LG P R S + + + N+ +++D G Sbjct: 370 KSEILLQFLGT----------------ASMRPNKYRNVSGILVKQF-----NSAILLDCG 408 Query: 62 PDFYMQVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK-- 116 + Q+ + + + +H H DH GI + P ++ Sbjct: 409 EGTFHQLQSQNNFDFNQKILIWISHVHCDHNLGIASFLQNCSNVYFLVPQIMIPWIVQLI 468 Query: 117 ---HLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + C+ D+ I N V + N++ + I+ + H Sbjct: 469 EFYQIKHTCYLCYIPFDNYNLEQEFAIQNAKVQKFNEIKLQQLQELFNIQLEYVNVDHCP 528 Query: 171 ISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHF 218 + G R +++Y D P + +L +N+D +I +A KN + H Sbjct: 529 -QAYGLRINFRDGSSISYSGDTR--PCQQFIQLSKNVDLMIHEATFTDDLQKNAISRKHS 585 Query: 219 SLSESLKKIELINPKNAILTHMH 241 ++ E+++ L N K ILTH Sbjct: 586 TVGEAVESAILANAKTLILTHFS 608 >gi|210629983|ref|ZP_03296206.1| hypothetical protein COLSTE_00090 [Collinsella stercoris DSM 13279] gi|210160734|gb|EEA91705.1| hypothetical protein COLSTE_00090 [Collinsella stercoris DSM 13279] Length = 244 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 72/216 (33%), Gaps = 53/216 (24%) Query: 57 IVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++D G + R L +D A++ TH H+DH+ G+ ++ ++A+ Sbjct: 1 MIDNGFSRREVLARIHELDLDENDVRALVLTHEHSDHVSGVS-----VWVKRWEGPLFAS 55 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 D R Y + + + + H I Sbjct: 56 QGT--------------PDARKYLACLPFETFGPGE-----EFEVAGVRVQTFPTTHDVI 96 Query: 172 SSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS------ 215 + +GFRF + Y TD P ++ L++ L I++ L+ G + Sbjct: 97 NPVGFRFSCQGDAIGYVTDTGTLPPGAMSLLRDARILAIESNHDVPMLRTGSYPRHLQDR 156 Query: 216 -----SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + ++ + H+ + Sbjct: 157 IISELGHLSNEQAAGALRELVTDRTEHVVAMHISQE 192 >gi|291563122|emb|CBL41938.1| RNAse Z [butyrate-producing bacterium SS3/4] Length = 292 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 70/216 (32%), Gaps = 39/216 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G P AC + SS + + +VD GP Sbjct: 5 KLVLLGTGT----PN------AC-----PDASGPSSAVVV------GDRAYLVDFGPGVV 43 Query: 66 MQVLREQVLSIDAV--------LYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP--- 112 Q + IDA+ TH H DH G L + L++K P+ V+ Sbjct: 44 RQAAKAYRNGIDALRPDRLVTAFCTHLHTDHTAGYPDLIFTPWVLERKEPLRVFGPKGIR 103 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D +HL ++++ + +E ++ + + L HG + Sbjct: 104 DMTEHLLKAYKVDIDFRINGFEKANEVGYRVETQEINSGVIYRDDRVTVEAFLVSHGTLE 163 Query: 173 SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFL 204 S GF+F + D EK + D L Sbjct: 164 SYGFKFTTPDRVIVISGDTAPL-EIVAEKAKGCDIL 198 >gi|222148757|ref|YP_002549714.1| metallo-beta-lactamase [Agrobacterium vitis S4] gi|221735743|gb|ACM36706.1| metallo-beta-lactamase [Agrobacterium vitis S4] Length = 283 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 57/268 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 H ILG S G P I P P +S+ ++ ++VD G Sbjct: 4 HLVILG---SKGGPAI-------RPGGPN----PTSMLLTL-----GGRRIVVDCGLGVT 44 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFES 121 V+ + +D + TH H+DH+ + GL + P+ VY + L++ Sbjct: 45 RGVVETGMSLKELDLIFITHLHSDHVLELGGLLHTAWTTGLATPVLVYGPLGT-QQLWQG 103 Query: 122 F----RYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRI-SSL 174 F Y + + P + ++E + PI ++ + + H + Sbjct: 104 FLASLDYDIRTRIEDEGRPDPAELITIVEYGEGPIFDENG---LTVSALRVDHPPVTECF 160 Query: 175 GFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LKNG 212 RF V +D FP + + D L+ +A L+ Sbjct: 161 ALRFSYGEKTVVLSSDTAYFPPLA-QFAAGADILVHEAMLPDGVENIVARTGNGARLREH 219 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHM 240 L++SH ++ + K +L H+ Sbjct: 220 LYASHTLAEDAGRLASAAGVKKLVLNHL 247 >gi|291524005|emb|CBK89592.1| RNAse Z [Eubacterium rectale DSM 17629] gi|291528533|emb|CBK94119.1| RNAse Z [Eubacterium rectale M104/1] Length = 303 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 78/266 (29%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GY 98 ++ +S + + + +++D G + + + ID + TH HADHI G+ GL Sbjct: 19 WLTALSLKYNGSNILIDCGEGTQIAMKEAGINFKPIDILCITHFHADHISGLPGLLLTMG 78 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV--IENNDVPICMKSAG 156 ++ P+ + + + RT P + + IE N+ + G Sbjct: 79 NAERTEPLTIIGPKGLTRVVTAL----------RTIAPELPFEIKCIELNEQDEYFEMNG 128 Query: 157 GVIEAIPILQQHGRISSLGF-----RFGNVA----------------------------- 182 I A +H + G+ R G + Sbjct: 129 YHIHA--FRVKHAVL-CYGYSVEIKRSGRFSVERAKEKEIPMRLWNPLQKGNTVEFEGRV 185 Query: 183 -----------------YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHF 218 YCTD +E + D I + + H Sbjct: 186 YTPDMVLGPARKGIKVTYCTDSRPL-EHIVEAAEGSDLFICEGMYAEKEKIVKAKQYKHM 244 Query: 219 SLSESLKKIELINPKNAILTHMHVDL 244 + E+ + K LTH L Sbjct: 245 TFYEAADMAKRAGVKELWLTHFSPSL 270 >gi|254445243|ref|ZP_05058719.1| metallo-beta-lactamase superfamily, putative [Verrucomicrobiae bacterium DG1235] gi|198259551|gb|EDY83859.1| metallo-beta-lactamase superfamily, putative [Verrucomicrobiae bacterium DG1235] Length = 263 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 88/278 (31%), Gaps = 90/278 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F+ILG +S + + ++ N V++D G Sbjct: 1 MQFSILGSSSSG----------------------NAGVLVT------ENCKVLIDAGFSC 32 Query: 65 YM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 +L E + IDA+ TH H+DHI GI + K + +A P K + Sbjct: 33 KRICGMLEERHIKPEEIDAIFVTHEHSDHIAGI---STFSKKFGPKL--FANPLTAKAIQ 87 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 N ++ + + + H +G++F Sbjct: 88 ------------PKLKTKPNWMLFQTGS-----QFEFRDLTIESFSIPHDAHDPVGYKFT 130 Query: 179 -----------GNVAYCTDVNAFPAESLEKLQNLDFLII-----------DALKN----- 211 +A+ TD+ P +++Q++D L++ D + Sbjct: 131 SGRGDDLFSPIKRMAWVTDLGFAPQNIAQRIQDVDTLVVESNYDTQMLQDDTRRPWALKQ 190 Query: 212 ---GLHSSHFSLSESLKKIELI-NPK--NAILTHMHVD 243 G H H S + + + + I P+ L H+ D Sbjct: 191 RISGRHG-HLSNTAAKELLASIAQPRWNRVFLAHLSSD 227 >gi|296445953|ref|ZP_06887903.1| coenzyme PQQ biosynthesis protein B [Methylosinus trichosporium OB3b] gi|296256471|gb|EFH03548.1| coenzyme PQQ biosynthesis protein B [Methylosinus trichosporium OB3b] Length = 309 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 104/324 (32%), Gaps = 83/324 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG GA G P+ + C + RT+SSL +S T +++ PD Sbjct: 5 ILGAGAGGGFPQWNCNCANCRAVREGKPGFSPRTQSSLAVSADG----VTFALLNASPDL 60 Query: 65 YMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 Q+ LR I +V+ T+ DH+ G+ L++ + +Y++ Sbjct: 61 RQQIAQSPQLSPGPGDGLRA--SPIKSVVLTNGDVDHVAGL-----LNLREAQAFSIYSS 113 Query: 112 PDCMKHLF--ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L F L R P + ++ V + G + A P+ HG Sbjct: 114 GRILNVLAGNRIFDILVPELVTRVEFPFDEAVPLQGAGVDL-----GLAVRAFPV---HG 165 Query: 170 RISS---------LGFRFGNVA--------------YCTDVNAFPAESLEKLQNLDFLII 206 +I+ LG R G+ Y +L+ + Sbjct: 166 KIALWLEDKSAADLGTRIGDTLGVEIIETATGKSCFYIPGCAEIDDALKARLKGASLVFF 225 Query: 207 DAL--------------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD---LDY 246 D K G H ++S S+ E ++ I H++ LD Sbjct: 226 DGTLFHENEMIEQGLLGKTGSRMGHVNMSGENGSMAAFENLDVARKIYVHINNSNPTLDA 285 Query: 247 DMVLKST--PSRVVPAFDGMQFSS 268 + + DGM+ + Sbjct: 286 SSKERRIVNAAGWEIGEDGMEVTL 309 >gi|160878508|ref|YP_001557476.1| ribonuclease Z [Clostridium phytofermentans ISDg] gi|189043783|sp|A9KSU3|RNZ_CLOPH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|160427174|gb|ABX40737.1| ribonuclease Z [Clostridium phytofermentans ISDg] Length = 304 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 84/254 (33%), Gaps = 54/254 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGL--RG 97 ++ + R + +++++D G + +RE+ SID + +TH H DHI G+ GL Sbjct: 19 WLTALMTRLNGSSLLIDCGEGTQI-AIREKGWSFHSIDIICFTHYHGDHISGLPGLLLSM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 + +P+ V + L F F + + VN VI V Sbjct: 78 GNADRTQPVTVIGPKGLERVVSALRVIAPELPFELNFIEVTNPQETICVNDYVINAFRVN 137 Query: 150 ICMKSAGGVIE------AIPILQQHGRISSLGF-------------------------RF 178 + G IE IP + + + R Sbjct: 138 HNVICYGYTIEVKRTGRFIPEMAMQNEVPIELWSRLQKGQTIEKDSRVFTPDMILGPQRK 197 Query: 179 G-NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELI 230 G + YCTD P +E+ Q D I + + H + E+ + + Sbjct: 198 GIKLTYCTDSRPVPQ-IIEQAQGSDLFICEGMYGEKEKQSNAIENKHMTFYEAAELAKQA 256 Query: 231 NPKNAILTHMHVDL 244 K LTH L Sbjct: 257 GVKELWLTHYSPSL 270 >gi|238923242|ref|YP_002936757.1| ribonuclease Z [Eubacterium rectale ATCC 33656] gi|259494133|sp|C4ZFN9|RNZ_EUBR3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|238874916|gb|ACR74623.1| ribonuclease Z [Eubacterium rectale ATCC 33656] Length = 303 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 78/266 (29%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GY 98 ++ +S + + + +++D G + + + ID + TH HADHI G+ GL Sbjct: 19 WLTALSLKYNGSNILIDCGEGTQIAMKEAGINFKPIDILCITHFHADHISGLPGLLLTMG 78 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV--IENNDVPICMKSAG 156 ++ P+ + + + RT P + + IE N+ + G Sbjct: 79 NAERTEPLTIIGPKGLTRVVTAL----------RTIAPELPFEIKCIELNEQDEYFEMNG 128 Query: 157 GVIEAIPILQQHGRISSLGF-----RFGNVA----------------------------- 182 I A +H + G+ R G + Sbjct: 129 YHIHA--FRVKHAVL-CYGYSVEIKRSGRFSVERANEKEIPMRLWNPLQKGNTVEFEGRV 185 Query: 183 -----------------YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHF 218 YCTD +E + D I + + H Sbjct: 186 YTPDMVLGPARKGIKVTYCTDSRPL-EHIVEAAEGSDLFICEGMYAEKEKIVKAKQYKHM 244 Query: 219 SLSESLKKIELINPKNAILTHMHVDL 244 + E+ + K LTH L Sbjct: 245 TFYEAADMAKRAGVKELWLTHFSPSL 270 >gi|256396657|ref|YP_003118221.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256362883|gb|ACU76380.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 257 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 83/244 (34%), Gaps = 39/244 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + V++D G ++ R V + AV+ +H HADH +D Y Sbjct: 20 SSYLVEH-----GGYRVLLDFGNGALGELQRYGDVYDLQAVILSHLHADHC--VDMCGYY 72 Query: 99 FLKQKRP-------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN--DVP 149 ++ RP + V+ + + +++ DD + + + + Sbjct: 73 VARKYRPGGEPLPLLPVWGPAGTRERIAKAYD-----TDDAECESVFSFRDVLEGAPEGA 127 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFL 204 G H + + R + Y D P +L+ L + D L Sbjct: 128 TGNTFEIGPFTVCVTRVDH-PVEAYAIRLEADGHTLVYSGDTG--PCAALDNLAKGADLL 184 Query: 205 IIDALKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + +A + H + E+ + +LTH+ D ++ L + + Sbjct: 185 LAEASFQEPRDNGLLGLHLNGREAGESATAGGVGRLVLTHIPPWTDAELNLAAAKN---- 240 Query: 260 AFDG 263 ++DG Sbjct: 241 SYDG 244 >gi|225028722|ref|ZP_03717914.1| hypothetical protein EUBHAL_03001 [Eubacterium hallii DSM 3353] gi|224953948|gb|EEG35157.1| hypothetical protein EUBHAL_03001 [Eubacterium hallii DSM 3353] Length = 291 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 70/228 (30%), Gaps = 55/228 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK +LG G P AC N SS + + IVD Sbjct: 1 MKT--KLVLLGTGT----PN------AC-----PNANGPSSAVVV------GDRAYIVDF 37 Query: 61 GPDFYMQVLREQVLSIDAV--------LYTHPHADHIHGIDGLR--GYFLKQKRPIDVYA 110 GP Q IDA+ TH H DH G L + L++ P+ V+ Sbjct: 38 GPGVVRQASAAYFNGIDALRPDLLTVAFCTHLHTDHTAGYPDLIFTPWVLERPVPLKVFG 97 Query: 111 A---PDCMKHLFESFRY-------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 H+ +++ F+ ++ Y +E ++ + + Sbjct: 98 PKGMQHMTDHILKAYETDIDFRINGFEKANESGYR-------VEVTEIESGIIYKDDRVT 150 Query: 161 AIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFL 204 HG + G++F + D EK ++ D L Sbjct: 151 VEAFPVSHGTLECYGYKFITPDKTIVITGDTAPL-DIVAEKAKDCDIL 197 >gi|167969086|ref|ZP_02551363.1| hypothetical protein MtubH3_14078 [Mycobacterium tuberculosis H37Ra] gi|215403186|ref|ZP_03415367.1| hypothetical protein Mtub0_05711 [Mycobacterium tuberculosis 02_1987] gi|215430225|ref|ZP_03428144.1| hypothetical protein MtubE_06024 [Mycobacterium tuberculosis EAS054] gi|215445521|ref|ZP_03432273.1| hypothetical protein MtubT_06107 [Mycobacterium tuberculosis T85] gi|260200396|ref|ZP_05767887.1| hypothetical protein MtubT4_09768 [Mycobacterium tuberculosis T46] Length = 258 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 46/250 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S + R +++D G Sbjct: 4 RITVLGCSGS----VVGPDSPA-------------SGYLLRAPHTPP---LVIDFGGGVL 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAAPDCMKHLFES 121 + R + VL +H HADH + GL + +Y D L Sbjct: 44 GALQRHADPASVHVLLSHLHADHCLDLPGLFVWRRYHPSRPSGKALLYGPSDTWSRL--- 100 Query: 122 FRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y ++ + + + G + +P L H S G R Sbjct: 101 ------GAASSPYGGEIDDCSDIFDVHHWADSEPVTLGALTIVPRLVAHPT-ESFGLRIT 153 Query: 180 N-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELI 230 + +AY D + +E + +D + +A H S +E+ Sbjct: 154 DPSGASLAYSGDT-GICDQLVELARGVDVFLCEASWTHSPKHPPDLHLSGTEAGMVAAQA 212 Query: 231 NPKNAILTHM 240 + +LTH+ Sbjct: 213 GVRELLLTHI 222 >gi|146337312|ref|YP_001202360.1| beta-lactamase family hydrolase [Bradyrhizobium sp. ORS278] gi|146190118|emb|CAL74110.1| putative hydrolase; putative Metal-dependent hydrolase of the beta-lactamase superfamily III [Bradyrhizobium sp. ORS278] Length = 314 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 98/308 (31%), Gaps = 61/308 (19%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K LG G PR+ +NP N + + T ++D G Sbjct: 29 KTGTRIIFLGT---KGGPRVGIG-----ASNPAN-------LVVV-----NGTPFVIDCG 68 Query: 62 PDFYMQVLREQ--VLSIDAVLYTHPHADHIH--GIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q++ + S+ +L +H H+DH G + PI + ++ Sbjct: 69 MGVSRQLVSAGVPIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSFGPKG-LEA 127 Query: 118 LFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS- 172 + SF ++ D P P++I + + + H I+ Sbjct: 128 MTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKDIDADGVVVKTADVTVTAFRTPHPPITD 187 Query: 173 SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------------LK 210 + ++F G + + +D A+ + + + D L+ + LK Sbjct: 188 NFAYKFETPDGTIVFSSDT-AYNPKLADFAKGADVLVHECLYVPAVDRLVIKTKNGSTLK 246 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG------- 263 L SH + + + K +L+H D ++ + V + G Sbjct: 247 KHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGRILVAKD 306 Query: 264 -MQFSSPI 270 M+ P+ Sbjct: 307 LMELKLPV 314 >gi|296103955|ref|YP_003614101.1| ribonuclease Z [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058414|gb|ADF63152.1| ribonuclease Z [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 305 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 40/183 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLDLQHPTRGGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMK 116 Q+L +D + TH H DH+ G+ GL + P+ +Y + Sbjct: 42 GTQQQLLHTAYHPGKLDKIFITHLHGDHLFGLPGL--LCSRSMAGNANPLTIYGPAGTGE 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + R D YP +E ++ + G H + G+ Sbjct: 100 FVETTLRLSGSWTD---YP-------LEVIEITEGLVLDDGDYTVTARPLNH-PVECYGY 148 Query: 177 RFG 179 R Sbjct: 149 RIE 151 >gi|313201325|ref|YP_004039983.1| coenzyme pqq biosynthesis protein b [Methylovorus sp. MP688] gi|312440641|gb|ADQ84747.1| coenzyme PQQ biosynthesis protein B [Methylovorus sp. MP688] Length = 305 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 95/314 (30%), Gaps = 63/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 +LG GA G P+ + CD RRT+SS+ +S V+ +T Sbjct: 1 MQIHVLGAGAGGGFPQWNCNCPNCDGLRKGTIKAKRRTQSSICVSGDGINW----VLFNT 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I ++ DH G+ LR +K+ +++ Sbjct: 57 SPDILQQIQEFPPLQPARAIRDSGIVGIVLIDAQIDHTTGLLMLREGQVKR----EIWCT 112 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI------PI 164 + L Y + + + + + A A+ P Sbjct: 113 DMVYQDLTTGNPLL---NILGHYCGVNHHPIAVDGQTTFEIPGAANLRFTAVALKSAAPP 169 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIID------- 207 H G G + Y + L+ D +++D Sbjct: 170 YSPHRNDPHPGDTIGVLIEDTKTGKKCWYSPGLGEIEPHLPPLLEQADCIMVDGTFWTDT 229 Query: 208 -----ALKNGLHSSHFSLSESLK--KIELINP-KNA--ILTHMHVDL-----DYDMVLKS 252 L S L +S + +E ++P K A +L H++ D + Sbjct: 230 EMIDMGLMTKTARSIGHLPQSGEGGMMEALSPYKKARKVLIHINNTNPILREDSAERAEL 289 Query: 253 TPSRVVPAFDGMQF 266 + A+DGM Sbjct: 290 ERHGIEVAYDGMDI 303 >gi|306833965|ref|ZP_07467089.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus bovis ATCC 700338] gi|304423966|gb|EFM27108.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus bovis ATCC 700338] Length = 269 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 77/246 (31%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++D G +L E + +DA+ TH H+DHI G+ L ++ + Sbjct: 25 PQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVG-----VLARRYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I + + G I+ Sbjct: 80 DVYANEKTWQMIDERNM-------------IGKLDFAQKHIFERGKTLTLGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L++G + Sbjct: 127 SHDAVEPQFYRLMKDNKSFVILTDTGYVSDRMAGIIENADGYLIESNHDVEILRSGAYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I I K L H+ +L + + + + Sbjct: 187 SLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMENNLIQAD 246 Query: 257 VVPAFD 262 +D Sbjct: 247 FGVGYD 252 >gi|226360556|ref|YP_002778334.1| hypothetical protein ROP_11420 [Rhodococcus opacus B4] gi|226239041|dbj|BAH49389.1| hypothetical protein [Rhodococcus opacus B4] Length = 284 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 42/249 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S+ P D +S + + +++D GP Sbjct: 33 MRITVLGCSGSVSGP---------DS--------PASGYLLTAPDTPP---LVLDFGPGV 72 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAAPDCMKHLFE 120 + R +VL +H HADH + GL + P VY D + + Sbjct: 73 LGALQRFADPGEVSVLLSHLHADHCLDLPGLLVWRRYHPHPPKGRALVYGPSDTARRIGV 132 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + C +DD + + + V I G + H + GFR N Sbjct: 133 ASAECGGDIDDISDTIDLR-HWADGEPVTI------GDLTITARRVNHPP-EAYGFRLTN 184 Query: 181 -----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELIN 231 + Y D E +E ++ D L+ +A + H S +E+ + Sbjct: 185 GAGRTLVYTGDT-GMCEEVIELARDADVLLAEASWTHSPDRPEGIHLSGTEAGRVAHRAG 243 Query: 232 PKNAILTHM 240 +LTH+ Sbjct: 244 VAELLLTHI 252 >gi|144899937|emb|CAM76801.1| beta-lactamase [Magnetospirillum gryphiswaldense MSR-1] Length = 275 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 86/276 (31%), Gaps = 50/276 (18%) Query: 27 ACDPTNPKNRRTRSSLKISRVSERGSNTTVIV-DTGPDFYM--QVLREQVLSIDAVLYTH 83 AC + +S E V++ D G M + L ++ S +++TH Sbjct: 15 ACPSPDHVVYGGNTS-----CVEFRLGDNVLIFDAGTGIRMLGRDLFKRGTSSATLMFTH 69 Query: 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 H DHI+G F + HL L + P P+ + Sbjct: 70 THWDHINGFPFFAPAFN------PAFGLQVMAGHLNGQAGAIEAVLAKQMENPTF-PVPL 122 Query: 144 ENNDVPICMKSAGGVIEAIPI--------LQQHGRISSLGFRFG----NVAYCTDVNAFP 191 E + E P+ +H + G+R +V Y TD P Sbjct: 123 ETMRSRLSFHDFRAGDELHPVDGVVVKTAPLRHPN-QATGYRVEYQGKSVCYVTDTEHVP 181 Query: 192 ----AESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKN-AILTHM 240 L +Q D +I D+ +H H + E ++ AI Sbjct: 182 GQPDENVLGLIQGADLVIYDSTYTDDEFPAKIHWGHSTWQEGVRLCRAAGVGRLAIF--- 238 Query: 241 HVDLDYDMV--------LKSTPSRVVPAFDGMQFSS 268 H D ++D V K + A DGM+ + Sbjct: 239 HHDPEHDDVFMAKLEAEAKQAWDGTLVARDGMEVTV 274 >gi|288572791|ref|ZP_06391148.1| metallo-beta-lactamase family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568532|gb|EFC90089.1| metallo-beta-lactamase family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 273 Score = 64.0 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 28/218 (12%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIH 90 N+R S ++ + + +D GP M LR V ID +L TH H DH Sbjct: 24 NQRRSSGGMVASL----DGLILAIDPGPGALVRMCSLRPTVDPNRIDGMLLTHRHIDHSG 79 Query: 91 GIDGL-RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + + +RP + A P + E F L R I + E+ +P Sbjct: 80 DFNVIAEAMTGGGRRPGGLVALPS--DAISEE-PVLFGYLKRR----IAEIHLWEDG-MP 131 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRF-GNV---AYCTDVNAFPAESLEKLQNLDFLI 205 + E IP+ +H + G +F GN +D AE + + D ++ Sbjct: 132 VPFPKG----EVIPLRLRHHGVECYGLKFIGNFPTWGIISDTAYI-AEIPDFFSDCDVVV 186 Query: 206 IDA--LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + L+ H S+ + K +E I+PK ++TH+ Sbjct: 187 ANTTLLEKVGRIEHLSVPDMEKLLEEISPKLLLMTHLG 224 >gi|19745356|ref|NP_606492.1| hypothetical protein spyM18_0195 [Streptococcus pyogenes MGAS8232] gi|19747461|gb|AAL96991.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] Length = 259 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGRAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 DGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|254478176|ref|ZP_05091558.1| metallo-beta-lactamase domain protein [Carboxydibrachium pacificum DSM 12653] gi|214035905|gb|EEB76597.1| metallo-beta-lactamase domain protein [Carboxydibrachium pacificum DSM 12653] Length = 259 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 35/178 (19%) Query: 53 NTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++VD G +L V I A+L TH H DHI G L ++ I Sbjct: 21 DVHLLVDAGLTGRTIEKALLNIGVHPEQISAILITHEHKDHILG-----AGVLSRRYNIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA + + + ++R Y + G I+ P + Sbjct: 76 IYANKATWEAMERDIKEI--KEENRLY-------------FATGEEFEIGEIKIKPFKKP 120 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +GF F ++ TD+ L D +++++ LK G + Sbjct: 121 HDAAEPVGFSFKAGGKKISIATDLGYMTRGVAYNLMESDLILLESNHDVKMLKEGPYP 178 >gi|81429059|ref|YP_396059.1| beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78610701|emb|CAI55752.1| Putative metal-dependent hydrolase (Beta-lactamase family III) [Lactobacillus sakei subsp. sakei 23K] Length = 246 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 33/206 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ----KR 104 + + +++D G + + +E L +DAVL TH H DHI + L+ Y+ Q K Sbjct: 25 KSGDYHLLLDCGSGALLALEKELDPLQLDAVLLTHYHHDHIADVGVLQYYWQLQAGQKKE 84 Query: 105 PI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 PI +Y D + + P V + G ++ Sbjct: 85 PILPIYG----------------HLQDPLHFGSLTLPNVTQGFGYQEDTTLQLGPLKVTF 128 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHS 215 +H + + R + + D FP + E Q D L+ D L + Sbjct: 129 KRTEH-PVPAFAVRIEEEATGKVLVFTADTAYFPGLA-EFCQGADLLMTDTNFLADRTGK 186 Query: 216 -SHFSLSESLKKIELINPKNAILTHM 240 +H + ++S ++ K +LTH+ Sbjct: 187 MAHMTTTQSANLAQISGVKQLLLTHL 212 >gi|150392428|ref|YP_001322477.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149952290|gb|ABR50818.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 264 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 49/230 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G + ++ + + +L +H H DHI G+ L ++ Sbjct: 20 SDGKEHLLVDAGLSGKQIESRLKDIGMNPKDLTGILVSHEHRDHILGVG-----ILSRRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA K + + + G + P Sbjct: 75 NLPVYANEGTWKGMADK---------------VGKVKEEHICFFDQTRDFKIGKLTVSPF 119 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID------------- 207 H +GF F ++ TD+ E L K+ N D ++++ Sbjct: 120 SISHDAKDPVGFCFQGSNAKISIATDLGHIDEEILNKVGNSDLVVLESNHDVEMLKIGQY 179 Query: 208 --ALKNGLHS--SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 ALK + S H S + I + N K +L H+ + ++ + Sbjct: 180 PYALKRRVLSDVGHLSNDAAGDAIVDLVKRNVKAILLAHLSKENNFPELA 229 >gi|258648432|ref|ZP_05735901.1| metallo-beta-lactamase family protein [Prevotella tannerae ATCC 51259] gi|260851182|gb|EEX71051.1| metallo-beta-lactamase family protein [Prevotella tannerae ATCC 51259] Length = 261 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 52/234 (22%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I+D G + RE ++ A+L TH H DH+ + L G + + Sbjct: 20 DGIGLIIDAGIGIRSFKKYFREYGFTYPTLKAILVTHDHTDHVKAVGALSGEY-----NL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALD---DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +V+A + K + ++ Y K + RTY P + + G Sbjct: 75 EVFATEEVHKGILNNY-YAHKKVRPELCRTYLPGDDW--------------SIGPFHITT 119 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + G+ N + TD +F E + ++ L+I+A L G Sbjct: 120 FTVPHDASHNCGYFIETATTNFCFITDAGSFTPEMISFIRRARNLVIEANYDAAMLDEGP 179 Query: 214 HSSHF------------SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 + H + + E + +N L H+ + ++ + + T Sbjct: 180 YPLHLKKRIKAPTGHACNAETARILEENLAATTENIWLCHLSEENNHPELARKT 233 >gi|55377790|ref|YP_135640.1| hypothetical protein rrnAC0963 [Haloarcula marismortui ATCC 43049] gi|55230515|gb|AAV45934.1| unknown [Haloarcula marismortui ATCC 43049] Length = 250 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 85/281 (30%), Gaps = 49/281 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R +S + R R ++VD G Sbjct: 1 MRLTFLGTGSAM----------------PTGSRMQSGYLLERDGNR-----LLVDCGSGV 39 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMK---HL 118 + +D VL TH H DH+ +D L + + P L Sbjct: 40 LHSLAQTDTGYEGVDTVLLTHHHLDHVSDLDVLMKARWLAGETDLTIAGPPGTSDLVRDL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E+ Y LD P + C A + G +LG Sbjct: 100 LETHDYMQDRLDLTLRDLDGGPFELAGFSGDTCETRHSMQCFAYRLSVDDGPAITLG--- 156 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLKKIELINPK 233 D AF +E L+ D H + +L E+L+ + Sbjct: 157 ------ADSEAFTDL-IEFADGSAVLVHDCSFPDDVDVSNHPTPTTLGETLRDAD-AEVG 208 Query: 234 NAILTHM--HVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 LTH+ H + ++ +L+S V A D + + Sbjct: 209 RVYLTHLYPHTEGRHEEMLESIADSYDGDVQFAEDSLTITV 249 >gi|260434835|ref|ZP_05788805.1| ribonuclease Z [Synechococcus sp. WH 8109] gi|260412709|gb|EEX06005.1| ribonuclease Z [Synechococcus sp. WH 8109] Length = 319 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 79/309 (25%), Gaps = 105/309 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEM--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q LR + + V TH H DH+ G+ GL G +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLAGSSSAGVDLYGPDPLESYLN 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 R + YP ++ + + + + P+ R+ + +R Sbjct: 102 GVLR---TSSTRIGYPLAIHRVRDAAEQSTLLFEDDDFTVRCTPLTH---RVPAYAYRIE 155 Query: 179 -----GNV--------------AY----------CTDVNAFP------------------ 191 G Y D + Sbjct: 156 QKPLAGRFDIEKARELNIPPGPVYAQLKRGETVTLEDGRSIDGTSLCGEERPGVSVVYCT 215 Query: 192 -----AESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 ++E + D LI H S H + + + + Sbjct: 216 DTVFCEAAVELARGADLLI--------HESTFAHGEAEMAFQKQHSTSTMAAQTAAEAGV 267 Query: 233 KNAILTHMH 241 +LTH+ Sbjct: 268 GQLVLTHLS 276 >gi|168491146|ref|ZP_02715289.1| VicX protein [Streptococcus pneumoniae CDC0288-04] gi|183574335|gb|EDT94863.1| VicX protein [Streptococcus pneumoniae CDC0288-04] Length = 269 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 84/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 SKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H ++ +RF + TD ++N D +I+A L++G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIEANHDVEILRSGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|225027064|ref|ZP_03716256.1| hypothetical protein EUBHAL_01320 [Eubacterium hallii DSM 3353] gi|224955528|gb|EEG36737.1| hypothetical protein EUBHAL_01320 [Eubacterium hallii DSM 3353] Length = 263 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 76/232 (32%), Gaps = 49/232 (21%) Query: 52 SNTTVIVDTG-PDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++D G Q+ +I + TH H DHI G+ +K P Sbjct: 20 EKSHFLIDAGISRKRIVEGLTQMEVAP-ETIQGIFVTHEHMDHISGLG-----VFLRKYP 73 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + V+A + + + + V+ + E+ + G IEA Sbjct: 74 VPVFATAKTIDEILST-----------SSLGKVDKNLFESITPDNPIYMDGIKIEAS--R 120 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS 215 H + + + V TD + +EKLQ + L+ ++ L G + Sbjct: 121 ILHDAADPVCYTVSDTESKVGVATDFGTYDEYLVEKLQGCESLLVESNHDLNMLMVGPYP 180 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + + K+ L H+ + +Y + T Sbjct: 181 YPLKKRIMGNKGHLSNERAGQFLSKVIGEECKHIFLGHLSKENNYGELAYET 232 >gi|118443215|ref|YP_877046.1| metallo-beta-lactamase superfamily protein [Clostridium novyi NT] gi|118133671|gb|ABK60715.1| Metallo-beta-lactamase superfamily protein [Clostridium novyi NT] Length = 262 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 89/250 (35%), Gaps = 59/250 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS +++++D G + ++ + + ID + TH H DH+ G+ Sbjct: 14 SVYIS-----SGKSSILIDAGLPGKHIEKALEAINKNPNDIDGIFVTHEHIDHVKGVG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ I +YA + + ++ I I + I +K Sbjct: 67 ---VLSRRYNIPIYANELTWQGMKKNIGKI-----------KEENINIISKHKNITIK-- 110 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H + +G+ TD+ F E E ++ D +++++ Sbjct: 111 --DMDIFNYSISHDAVDPVGYAIYSGKSKACVATDLGYFSDEVRENTKDADVVLLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSE---SLKKIELINPKNAILTHMHV-----DLDY 246 LK G + H S + ++ + N KN IL H+ DL Y Sbjct: 169 VEMLKFGPYPYNLKRRILSNVGHLSNDDCGKAIVTMTENNCKNIILGHLSKTNNYPDLAY 228 Query: 247 DMVLKSTPSR 256 + V++ Sbjct: 229 ETVVEVLREN 238 >gi|78213660|ref|YP_382439.1| RNAse Z [Synechococcus sp. CC9605] gi|123577622|sp|Q3AHP8|RNZ_SYNSC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|78198119|gb|ABB35884.1| Ribonuclease Z [Synechococcus sp. CC9605] Length = 319 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 76/309 (24%), Gaps = 105/309 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEM--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q LR + + V TH H DH+ G+ GL G +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLAGSSSAGVDLYGPDPLESYLN 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 + R P + + + + L H R+ + +R Sbjct: 102 G----VLRTSSTRIGYP-LAVHRVRDAAEQGTLLFEDDDFTVRCTLLTH-RVPAYAYRIE 155 Query: 179 -----GNV--------------AY----------CTDVNAFP------------------ 191 G Y D + Sbjct: 156 QKPLAGRFDIEKARELNIPPGPVYAQLKRGETVTLEDGRSIDGTSLCGEERPGVSVVYCT 215 Query: 192 -----AESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 ++E + D LI H S H + + + + Sbjct: 216 DTVFCEAAIELARGADLLI--------HESTFAHGEAEMAFQKQHSTSTMAAQTAAEAGV 267 Query: 233 KNAILTHMH 241 +LTH+ Sbjct: 268 GQLVLTHLS 276 >gi|322694942|gb|EFY86759.1| tRNA processing endoribonuclease Trz1, putative [Metarhizium acridum CQMa 102] Length = 1220 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 92/298 (30%), Gaps = 60/298 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S VP + S + RV G ++D G Sbjct: 926 EIIPLGTGSS--VPS---------------KHRNVSATLIRVPGIG---NYLLDCGEGTL 965 Query: 66 MQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVY 109 Q+ R + ++ ++ +H HADH G L + +Q I Sbjct: 966 GQIRRAFDAEEAADVLRNLKCIVISHVHADHHMGTASLIKAWYEQSLRDGTNTTLAISCI 1025 Query: 110 AAPDCM-KHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQ- 166 M + L + F L + P P + + I+ IP+ Sbjct: 1026 GRYRSMLEELSQVEDLGFHRLRFPSCPFPNGKDRDMTTAEDLGEENFGLASIKRIPVPHC 1085 Query: 167 --QHGRISSL--GFRFGNVAYCTDVNAFPAESLEK-LQNLDFLIIDAL---KNGLH---S 215 +G L G R AY D P+ + + + L+ + H Sbjct: 1086 WRSYGTQLELTSGLRI---AYSGDCR--PSSAFAQGCKGAHLLVHECTFGDDKQDHAKAK 1140 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR-----VVPAFDGMQFSS 268 H +++E+L + + +LTH LK V+ AFD M+ Sbjct: 1141 KHSTMAEALSVAREMEARRTLLTHFSQRYSKADSLKRDRVHGEEHSVLLAFDLMRVKL 1198 >gi|222528646|ref|YP_002572528.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455493|gb|ACM59755.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 265 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 80/238 (33%), Gaps = 53/238 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQV---LSIDAVLYTHPHADHIHGIDGLR 96 S+ IS +T++IVD G F E++ I+A+L +H H DH+ Sbjct: 18 SILISY-----KDTSIIVDAGVSFKKLAEALEKIGFNKKINAILLSHDHYDHV-----KC 67 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +K + + + + S D +Y +++ + Sbjct: 68 AGVYFRKLNVPIITNYKTWESIKNSLG-----KVDESYVKLIDT----------GTSFSV 112 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G I H +GF F V+ CTDV + D +++++ Sbjct: 113 GSIGIDTFSIPHDASDPMGFCFYFKDKKVSICTDVGHVNDSVARMIDFSDIILLESNHDV 172 Query: 209 --LKNGLHS-----------SHFSLSESLKKIELIN---PKNAILTHMHVDLDYDMVL 250 L G + H S ++ + I +N + L H+ + ++ V Sbjct: 173 EMLMFGPYPYYLKQRIKSDKGHLSNEQAAQMILRLNLARTRRIYLGHLSEENNHPDVA 230 >gi|187924523|ref|YP_001896165.1| beta-lactamase [Burkholderia phytofirmans PsJN] gi|187715717|gb|ACD16941.1| beta-lactamase domain protein [Burkholderia phytofirmans PsJN] Length = 257 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + T V++D G + + L +DA+L TH H+DHI Sbjct: 14 ALLVEAQSGATTTRVLLDCGFSAKEVERRLTRLGASAEGLDAILITHEHSDHIG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L +K I +Y + + + + ++ + A Sbjct: 69 ALTLARKWSIPLYMSWGTARAV------------------GADEADVDLQVLWGDEAVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 G + +P H L + N + TDV L D L+++ Sbjct: 111 GDLSILPYTVPHDAREPLQYVLSNGASRLGVLTDVGTSTPHISSVLSGCDALVLECNHDV 170 Query: 209 -------------LKNGLHSSHFSLSESLKKIELI 230 + G + H + + + + + Sbjct: 171 RMLAGSRYPQSLKARIGGNHGHLNNDAAAEILASL 205 >gi|15901087|ref|NP_345691.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15903148|ref|NP_358698.1| metal-dependent hydrolase [Streptococcus pneumoniae R6] gi|111657845|ref|ZP_01408560.1| hypothetical protein SpneT_02000968 [Streptococcus pneumoniae TIGR4] gi|116516804|ref|YP_816554.1| vicX protein [Streptococcus pneumoniae D39] gi|148985120|ref|ZP_01818359.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|148989247|ref|ZP_01820627.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|148993835|ref|ZP_01823237.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|149002592|ref|ZP_01827524.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|149007117|ref|ZP_01830786.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|149012276|ref|ZP_01833345.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|149019217|ref|ZP_01834579.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168484879|ref|ZP_02709824.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|168486547|ref|ZP_02711055.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|168489053|ref|ZP_02713252.1| VicX protein [Streptococcus pneumoniae SP195] gi|168493147|ref|ZP_02717290.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|168577196|ref|ZP_02723005.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|169832897|ref|YP_001694656.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|182684047|ref|YP_001835794.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|194397665|ref|YP_002037826.1| VicX protein [Streptococcus pneumoniae G54] gi|221231920|ref|YP_002511072.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225854691|ref|YP_002736203.1| VicX protein [Streptococcus pneumoniae JJA] gi|225859006|ref|YP_002740516.1| VicX protein [Streptococcus pneumoniae 70585] gi|225860941|ref|YP_002742450.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|237649927|ref|ZP_04524179.1| VicX protein [Streptococcus pneumoniae CCRI 1974] gi|237822524|ref|ZP_04598369.1| VicX protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230884|ref|ZP_06964565.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254365|ref|ZP_06977951.1| VicX protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502779|ref|YP_003724719.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|303254278|ref|ZP_07340387.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|303258860|ref|ZP_07344839.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|303261544|ref|ZP_07347491.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|303264214|ref|ZP_07350134.1| vicX protein [Streptococcus pneumoniae BS397] gi|303266155|ref|ZP_07352048.1| vicX protein [Streptococcus pneumoniae BS457] gi|303268118|ref|ZP_07353918.1| vicX protein [Streptococcus pneumoniae BS458] gi|307067874|ref|YP_003876840.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|307127187|ref|YP_003879218.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|14193096|gb|AAK55819.1|AF219111_3 MicC [Streptococcus pneumoniae] gi|6689278|emb|CAB65440.1| VicX protein [Streptococcus pneumoniae] gi|14972706|gb|AAK75331.1| vicX protein [Streptococcus pneumoniae TIGR4] gi|15458730|gb|AAK99908.1| VicX protein [Streptococcus pneumoniae R6] gi|116077380|gb|ABJ55100.1| vicX protein [Streptococcus pneumoniae D39] gi|147759203|gb|EDK66196.1| vicX protein [Streptococcus pneumoniae SP14-BS69] gi|147761421|gb|EDK68387.1| vicX protein [Streptococcus pneumoniae SP18-BS74] gi|147763602|gb|EDK70537.1| vicX protein [Streptococcus pneumoniae SP19-BS75] gi|147922565|gb|EDK73683.1| vicX protein [Streptococcus pneumoniae SP3-BS71] gi|147925225|gb|EDK76304.1| vicX protein [Streptococcus pneumoniae SP6-BS73] gi|147927660|gb|EDK78685.1| vicX protein [Streptococcus pneumoniae SP9-BS68] gi|147931087|gb|EDK82066.1| vicX protein [Streptococcus pneumoniae SP23-BS72] gi|168995399|gb|ACA36011.1| VicX protein [Streptococcus pneumoniae Hungary19A-6] gi|172041983|gb|EDT50029.1| VicX protein [Streptococcus pneumoniae CDC1873-00] gi|182629381|gb|ACB90329.1| vicX protein [Streptococcus pneumoniae CGSP14] gi|183570428|gb|EDT90956.1| VicX protein [Streptococcus pneumoniae CDC1087-00] gi|183572535|gb|EDT93063.1| VicX protein [Streptococcus pneumoniae SP195] gi|183576568|gb|EDT97096.1| VicX protein [Streptococcus pneumoniae CDC3059-06] gi|183577200|gb|EDT97728.1| VicX protein [Streptococcus pneumoniae MLV-016] gi|194357332|gb|ACF55780.1| VicX protein [Streptococcus pneumoniae G54] gi|220674380|emb|CAR68930.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225720567|gb|ACO16421.1| VicX protein [Streptococcus pneumoniae 70585] gi|225723315|gb|ACO19168.1| VicX protein [Streptococcus pneumoniae JJA] gi|225726680|gb|ACO22531.1| VicX protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238374|gb|ADI69505.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|301794308|emb|CBW36733.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|301800146|emb|CBW32751.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] gi|301801919|emb|CBW34643.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] gi|302598772|gb|EFL65809.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|302637124|gb|EFL67612.1| vicX protein [Streptococcus pneumoniae SP14-BS292] gi|302639803|gb|EFL70259.1| vicX protein [Streptococcus pneumoniae SP-BS293] gi|302642335|gb|EFL72682.1| vicX protein [Streptococcus pneumoniae BS458] gi|302644325|gb|EFL74579.1| vicX protein [Streptococcus pneumoniae BS457] gi|302646026|gb|EFL76253.1| vicX protein [Streptococcus pneumoniae BS397] gi|306409411|gb|ADM84838.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pneumoniae AP200] gi|306484249|gb|ADM91118.1| VicX protein [Streptococcus pneumoniae 670-6B] gi|327389461|gb|EGE87806.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA04375] gi|332073563|gb|EGI84042.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17570] gi|332074556|gb|EGI85030.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17545] gi|332074835|gb|EGI85307.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41301] Length = 269 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 84/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 SKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H ++ +RF + TD ++N D +I+A L++G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIEANHDVEILRSGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|283131387|dbj|BAI63390.1| metal-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis] gi|283131400|dbj|BAI63402.1| hypothetical protein [Streptococcus dysgalactiae subsp. equisimilis] Length = 259 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L Q + + +Y + D + + P V E + G Sbjct: 81 KHLWQPKVLPIYGHDE----------------DRNEFAKLSIPDVSEGKAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|218883849|ref|YP_002428231.1| beta-lactamase domain protein [Desulfurococcus kamchatkensis 1221n] gi|218765465|gb|ACL10864.1| beta-lactamase domain protein [Desulfurococcus kamchatkensis 1221n] Length = 249 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 50/259 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG GA+ +P G R + ++D G ++ Sbjct: 7 FLGTGAA--IPVTRG--------------LPCIAL------RVDSNIYLLDVGEGCQSRM 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + + AV THPH DH G+ GL + +K + + + +H+ Sbjct: 45 FKAGLSPIKVKAVFVTHPHGDHYLGLFGLLQTMGLMDRKEALKLVVPKEVEEHIKVVVE- 103 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----N 180 K L +P + VI + +V K I QHG + + GFR G + Sbjct: 104 --KKLMRTVFP--LELTVITSGEVYRDEK-----ISVEAYPVQHG-VEAYGFRVGIGKKS 153 Query: 181 VAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPK 233 + Y D P ++ E + +D LI ++ SS H + ++ Sbjct: 154 LCYTGDT--MPCNTIVENCKGVDVLIHESTFTSEMSSEAHEEYHSTSKDAALTAIEAGVA 211 Query: 234 NAILTHMHVDLDYDMVLKS 252 + +LTH+ + VL+ Sbjct: 212 SLVLTHISARHSDEEVLRD 230 >gi|302385056|ref|YP_003820878.1| ribonuclease Z [Clostridium saccharolyticum WM1] gi|302195684|gb|ADL03255.1| ribonuclease Z [Clostridium saccharolyticum WM1] Length = 303 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 89/283 (31%), Gaps = 58/283 (20%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++D G + L+E+ ID + +TH HADHI G+ GL Sbjct: 19 WLTAMMARCDGSDLLIDCGEGTQI-ALKEKGWSPKPIDIICFTHYHADHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 +++ P+ + + L F F LD I+ P VI+ V Sbjct: 78 GNAERRSPLTLIGPKGLERVVGALRTIAPELPFELKFIELDQIREQVIIGPYVIDAYRVN 137 Query: 150 ICMKSAGGVIEA---------------IPI----LQQHGRISSLG-------------FR 177 + G I IP Q G G R Sbjct: 138 HNVVCYGYSISIPRKGRFDVERAYAAGIPQKFWNRLQKGETIEDGERTLTPDMVLGPARR 197 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELI 230 V YCTD P E + D I + + H + E+ + + Sbjct: 198 GLKVTYCTDTRPVP-VIAEYAREADLFICEGMYGEEGKESKAREYKHMTFYEAARLAKEA 256 Query: 231 NPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSSP 269 P+ LTH L +Y ++ R A D Sbjct: 257 QPRQMWLTHYSPSLTRPEEYMEKVREIFPRAKAAKDAWTLELE 299 >gi|322387746|ref|ZP_08061355.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321141613|gb|EFX37109.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 269 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S ++VD G + + + +DA+L TH HADHIHG+ L +K + Sbjct: 25 SKKKILVDAGLSGKKITSLLGEINRKPEDLDAILITHEHADHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANDKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|115522871|ref|YP_779782.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodopseudomonas palustris BisA53] gi|115516818|gb|ABJ04802.1| coenzyme PQQ biosynthesis protein B [Rhodopseudomonas palustris BisA53] Length = 327 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 58/195 (29%), Gaps = 48/195 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN---------------------RRTRSSLK 43 +LG A GVP+ C RT++S+ Sbjct: 2 LRVIVLGAAAGGGVPQWNCGCPVCRAARADPDQLRADSLRADSLRADSTRAMARTQASIA 61 Query: 44 ISRVSERGSNTTVIVDTGPDFYMQV------------LREQVLSIDAVLYTHPHADHIHG 91 IS E +V+ PD Q LR I V+ T+ D + G Sbjct: 62 ISVDDENW----FLVNASPDLRQQFNATPALHPKPGRLRH--SPIAGVILTNGEVDAVAG 115 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + +R + P +YA + L + F L + PI I+ P+ Sbjct: 116 LLSMR-----EGSPFTIYAHQRVLSILGAN--SIFNVLGESIV--QRQPIEIDVPFEPML 166 Query: 152 MKSAGGVIEAIPILQ 166 + +E P Sbjct: 167 PDGSASGLEIEPFAV 181 >gi|163848767|ref|YP_001636811.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526716|ref|YP_002571187.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670056|gb|ABY36422.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450595|gb|ACM54861.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 255 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 77/222 (34%), Gaps = 42/222 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G G+P DP + + G +VD G + Y Sbjct: 4 RVVLLGTGT--GLP---------DPDRAY----------THLVWDGPGGPFLVDVGGESY 42 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAAPDCMKHLFE 120 ++L + + VL TH H DHI+G+ L + L+ P+ +Y+ P ++ L Sbjct: 43 RRMLAAGIDPQRLTGVLLTHSHCDHINGLPALL-FSLRLGGRTEPLPIYSLPATIE-LTA 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 +F A + P++ V + + + + H R L RF Sbjct: 101 AF--LAAAGLEDCATPVIWQPVTPGEPLQLRD-----GLVITTAITAHSR-PCLALRFAA 152 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 V Y +D P ++ LI +A + H Sbjct: 153 PNVPAVCYSSDTEPCP-AVVDLATGAQILIHEATTAEPFAGH 193 >gi|303234005|ref|ZP_07320654.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] gi|302494930|gb|EFL54687.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] Length = 240 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 54/220 (24%) Query: 52 SNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + T ++++ G F + L +V ID L TH H DH + L K ID Y Sbjct: 21 NGTKILLECGLPFKKIQKALNYKVSDIDFCLVTHEHMDHAKAVKDL------MKAGIDCY 74 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH- 168 + L S + +N + I P+ H Sbjct: 75 MTKGTAEALEVSGH---------------RLKIFKNWAETKYKTTYINNILIQPLRAIHD 119 Query: 169 GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA--------------- 208 + + + + + TD + + +++ L+I+ Sbjct: 120 AKEPVMYYIKDKKINESLLFVTDTAFM---AYKIPSDINVLMIECNYVKKLIDERVDENG 176 Query: 209 ----LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMH 241 L+N + +H SL E+L + + K + H+ Sbjct: 177 INVSLRNRIVKNHMSLETVLEALDSVRMGKLKKVYILHLS 216 >gi|308802197|ref|XP_003078412.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] gi|116056864|emb|CAL53153.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] Length = 1014 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 93/319 (29%), Gaps = 78/319 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSE--RGSNTTVIVDTGPD 63 LG G P R S + + + +++D G Sbjct: 422 EIIFLGTG----------------SAEPSKYRGSSGILVELPHPTVSHGKSWLMLDCGEG 465 Query: 64 --------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC- 114 F +V+ V S+ V +H HADH+ G+ G+ Q + Sbjct: 466 TVGSIARMFGREVMMSIVQSLKMVWISHHHADHMLGVRGVLD-VHSQTCEAPLTLVGPTI 524 Query: 115 --------------MKHLFES--FRYCFKALD-------------------DRTYPPIVN 139 + + F F L ++ P N Sbjct: 525 LREWLEICGVSKSSYRFIRSRDLFAGPFGRLPPPPPPPMQPKSQPRSVVNAHQSMPSGPN 584 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAES 194 + + + G+ + +H R + G+ +AY D P+ + Sbjct: 585 SNRGSLSSIETTLIQLTGLSRIEAVPVEHCR-DAAALIIGSPSNWSLAYSGDCR--PSRA 641 Query: 195 LEKL-QNLDFLIIDALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVDLDYD 247 + + D +I +A +H + SE+L+ K+ +LTH Sbjct: 642 FARAARGCDVMIHEATFENELYNHAVRKRHSTTSEALETAADAQVKHIVLTHFSQRYPKA 701 Query: 248 MVLKSTPSRVVPAFDGMQF 266 + L S + AFDG + Sbjct: 702 ISLDSLSIEPIIAFDGFRV 720 >gi|325270982|ref|ZP_08137569.1| metallo-beta-lactamase superfamily protein [Prevotella multiformis DSM 16608] gi|324986779|gb|EGC18775.1| metallo-beta-lactamase superfamily protein [Prevotella multiformis DSM 16608] Length = 268 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 46/235 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + VL TH HADH+ + + G + Sbjct: 21 GTDCLMIDCGVGIRSLKKHFHNYGLQMKMVHNVLITHDHADHVKSVGSISG-----DLQL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + + ++ +C + D+ + + G P Sbjct: 76 PVYTTEDIHRGISQN--WCVRRKIDKALAMCLA----------KGEEIKIGEFAVTPFGV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H +G+ TD E + ++L+I+A L+ G + Sbjct: 124 PHDSTDCVGYSIVQGGMRFTLVTDCGHITEEIAHYISISNYLVIEANHEPEKLEAGPYPR 183 Query: 217 HF---------SLSE---SLKKIELINPK--NAILTHMHVDLDYDMVLKSTPSRV 257 H LS + +E +P + L H+ + ++ + K T V Sbjct: 184 HLKVRISGPNGHLSNEACAEALVENASPGLHHVWLCHLSDENNHPELAKKTVEAV 238 >gi|238917000|ref|YP_002930517.1| ribonuclease Z [Eubacterium eligens ATCC 27750] gi|238872360|gb|ACR72070.1| ribonuclease Z [Eubacterium eligens ATCC 27750] Length = 269 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 51/235 (21%) Query: 52 SNTTVIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V+ D G + + IDA+ TH H DH G+ + +K I Sbjct: 20 EDTHVLFDAGISRKRIEEGLNTAGLSLKDIDAIFVTHEHIDHTKGLG-----VISRKDGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y+ + + + + I + I N + + G + P Sbjct: 75 PIYSTSGTIDGIEQ----------ISSLGNIPDGI---FNKINADEDISIGDVTVHPFRI 121 Query: 167 QHGRISSLGFRF--------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNG 212 H + + F + TD+ F ++ L D ++++A L+ G Sbjct: 122 SHDANEPVAYTFTQKCADGIKKASVVTDLGYFDDYVVDNLTESDIMLVEANHDINMLQVG 181 Query: 213 LHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + H S S + + + K L H+ + +YD + T Sbjct: 182 PYPFYLKKRILGNKGHLSNETSGQLVNSLLHDKLKKIYLGHLSKENNYDKLAYET 236 >gi|148998655|ref|ZP_01826094.1| vicX protein [Streptococcus pneumoniae SP11-BS70] gi|147755492|gb|EDK62540.1| vicX protein [Streptococcus pneumoniae SP11-BS70] Length = 269 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 84/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 SKKKLLVDAGLSGKKIISLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H ++ +RF + TD ++N D +I+A L++G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIEANHDVEILRSGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|76802807|ref|YP_330902.1| hypothetical protein NP4346A [Natronomonas pharaonis DSM 2160] gi|76558672|emb|CAI50264.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 252 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 51/282 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA++ P R ++ L + G+ + ++VD G Sbjct: 1 MRVTFLGTGAAM----------------PSGDRFQTGLLLEDSG--GTASPLLVDCGSGV 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFES 121 + R + VL TH H DH+ + L +++ + + Sbjct: 43 LHGLARTDGGYEAPGTVLLTHHHLDHVADLLPLLKARWLAGETDLELVGPAGTAALIED- 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + + + + AG + A + H + L +RF Sbjct: 102 ---LLSVHEYLQGRVAITVRELSAGSATV----AGYDVTA--VETDHS-MDGLAYRFETD 151 Query: 181 ---VAYCTDVNAFPAESLEKLQNLDFLIIDALKN-----GLHSSHFSLSESLKKIELINP 232 + D E + L D H + L E+L ++ Sbjct: 152 DAIFTFSGDTEPI-DEIAALAEGSAVLAHDCSFPDGVDVDNHPTPSRLGETLSGYDI--- 207 Query: 233 KNAILTHM--HVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 LTH+ H D ++ ++ + V A DG+ S Sbjct: 208 GRVYLTHLYPHTDGHHEEMVAAVEDCFDGDVRIANDGLTVSI 249 >gi|325272109|ref|ZP_08138544.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] gi|324102752|gb|EGC00164.1| beta-lactamase domain protein [Pseudomonas sp. TJI-51] Length = 252 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G +L + AVL TH HADH+HG+ L ++ + Sbjct: 20 GDTFILVDCGFSLRETERRLALLGVSPAQLSAVLVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + K ++ + + I G ++ Sbjct: 75 PVYLSQGTLRGMR-------KPVEVAGFLACGQSLHI-------------GSLQVNAARV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 +H L + + TD+ ++ A LE+ Q LD L+I+A L G + + Sbjct: 115 EHDAYEPLQYVVSDGKRRFGMLTDLGSYDALLLERYQGLDALLIEANHCRDLLARGHYPA 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + + N ++ +L H+ Sbjct: 175 FLKRRVGGMQGHLNNHQAARLVHELGWNNLQHLVLAHLS 213 >gi|225874519|ref|YP_002755978.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] gi|225791942|gb|ACO32032.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] Length = 328 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 76/269 (28%), Gaps = 86/269 (31%) Query: 54 TTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T ++VD G + + E + +DA+L TH H DH+ G+ +K I V Sbjct: 23 TRLLVDAGLSCREIFKRMRAMGESIEDLDAILITHEHQDHVQGL-----AVTARKLGIPV 77 Query: 109 YAAPDCMKH------LFESFRYC------------------------------------- 125 Y + + Y Sbjct: 78 YFTEATHRAWMRWMTPRKRLTYAEWLEQQKAMTAAGKEPASDGDEAQDAAQEEREELTLD 137 Query: 126 ------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL---QQHGRISSLGF 176 KA + P E V A I I + H + +GF Sbjct: 138 LAAAAQSKAELEAPEPSKPEKDPCELPGVEYFRAGADFCIGDIAVRPFTIPHDAVDPVGF 197 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----------- 215 F + + TD+ P L+ D L+++A L++G + Sbjct: 198 VFEVEGVRLGFATDLGYIPPNVHAHLKKCDVLLLEANHDVDMLRDGPYPWSVKQRVMSRV 257 Query: 216 SHFSLSESLKKIELI---NPKNAILTHMH 241 H S + + +E +L H+ Sbjct: 258 GHLSNAAAADFLENSYDGQAAYVVLAHLS 286 >gi|251779298|ref|ZP_04822218.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083613|gb|EES49503.1| metallo beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 360 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 25/194 (12%) Query: 52 SNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + L++ + +D V+ THPH+DHI G+ + F I Sbjct: 65 DGKNILIDAGNNDSMAYNYLKQLGIKKLDYVMATHPHSDHIGGMTQIINEF-----DIGE 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY----PPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + AP H ++F KAL ++ P + + + + N + ++ Sbjct: 120 FYAPKV-NHSTKTFENMIKALQNKGIKLTAPTVGDTLNVGNATLQFLAPNSAK------Y 172 Query: 165 LQQHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + + ++GN +Y D A + + LD D LK G H SH S S+ Sbjct: 173 EDMNNYSIACKLKYGNTSYVFMGDAEALSEGEI-LAKQLDI-SADVLKLGHHGSHSSTSQ 230 Query: 223 SLKKIELINPKNAI 236 + ++ +NP+ AI Sbjct: 231 A--FLDKVNPRYAI 242 >gi|172036924|ref|YP_001803425.1| hypothetical protein cce_2009 [Cyanothece sp. ATCC 51142] gi|171698378|gb|ACB51359.1| unknown [Cyanothece sp. ATCC 51142] Length = 286 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 80/255 (31%), Gaps = 42/255 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V R +I D G + + L ++ + +TH H DHI G F+ Sbjct: 34 SCVEMRVGKERLIFDGGTGLRILGESLLSEMPVTGHLFFTHSHWDHIQGFPFFAPAFIP- 92 Query: 103 KRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + + D +P P+ I ++ A +I+ Sbjct: 93 GNQFHIYGLPAPNGATIKQRLH------DQMLHPNFPVPLQIMQANLDFYDIEAREIIKI 146 Query: 162 IPILQQHGRI----SSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDAL 209 I + G++ +LG+R Y TD FP L + LIID Sbjct: 147 NDITIETGKLNHPGEALGYRVTYQGLTAVYITDTEHFPDRLDNNVLHLANHAQVLIIDTT 206 Query: 210 KN----------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM--------VLK 251 + H + E +K E K +L H D + ++ Sbjct: 207 YTNEEYYDPKLSKVGWGHSTWQEGVKIAEAAKVKKLVL--FHHDPSHHDDCLDTIKRQVQ 264 Query: 252 STPSRVVPAFDGMQF 266 + A +G+ Sbjct: 265 QVYPNAILAKEGLVI 279 >gi|86606310|ref|YP_475073.1| ribonuclease Z [Synechococcus sp. JA-3-3Ab] gi|86554852|gb|ABC99810.1| ribonuclease Z [Synechococcus sp. JA-3-3Ab] Length = 324 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 37/185 (20%) Query: 1 MKDY--YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M D T LG S G+P R+ S + +R + Sbjct: 1 MTDPNAIRVTFLGT--SSGMPT---------------RQRNVSGVAVQFPQRSE--WWLF 41 Query: 59 DTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPD 113 D G Q+LR + + + TH H DHI+G+ GL P ID+Y P Sbjct: 42 DCGEGTQHQLLRLDELRPSQLRRIFITHMHGDHIYGLPGLLASCGLGSTPQHIDIYGPPG 101 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 ++L RY + P +E + ++ + P+ R+ + Sbjct: 102 LEEYLKTVLRY-----SESRIPYSFRVHTVETG---LILQDPEYWVFCAPLDH---RVPA 150 Query: 174 LGFRF 178 G+R Sbjct: 151 FGYRV 155 >gi|188996687|ref|YP_001930938.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931754|gb|ACD66384.1| beta-lactamase domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 254 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 87/239 (36%), Gaps = 42/239 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDV 108 + +++D GP +++ + ++A++ +H H DH+ I + K +D+ Sbjct: 32 AGKNILIDPGPGSLIRIFERGLEPKDLNAIVLSHRHLDHVADIASVVESATDSNKNKLDL 91 Query: 109 YA---------APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P +K+ + F+ IE ++ ++ I Sbjct: 92 LLAPIDAVDGDDPVVLKYTKKGFK------------------KIEITELGKIIEYENIKI 133 Query: 160 EAIPILQQHG-RISSLGFRFGNVAYCTD-VNAFPAESL-EKLQNLDFLIIDALKNGLHSS 216 + G SL F + N + F + L +N D ++ + + + Sbjct: 134 KPSIKHIHQGADTYSLQFEYNNKVFIYVACGRFYEDMLYAYPENPDVMVFNTTFVKSNLN 193 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDM---VLKSTPSR----VVPAFDGMQF 266 H S + + I+ + PK ILTH + + V K R V+ A+DG++ Sbjct: 194 YYHLSAEDVERIIKKVKPKLTILTHFSIQMLKHTPSKVAKEMSDRTGLKVIAAYDGLKV 252 >gi|134097800|ref|YP_001103461.1| beta-lactamase-like [Saccharopolyspora erythraea NRRL 2338] gi|291005564|ref|ZP_06563537.1| beta-lactamase-like protein [Saccharopolyspora erythraea NRRL 2338] gi|133910423|emb|CAM00536.1| beta-lactamase-like [Saccharopolyspora erythraea NRRL 2338] Length = 256 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 88/277 (31%), Gaps = 52/277 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP NP S + +T + +D G Sbjct: 1 MKLTILGC--SGSVPGPG---------NPA-----SGYLVE-----SGDTRIALDLGNGT 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYAAPDCM 115 + + R +DAVL +H H DH L + +R + V+A + Sbjct: 40 FGALQRHLDPFDLDAVLLSHLHPDHCADFAALTVFRRYHPAKPHDTAERRLPVFAPAEAP 99 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + + L + + + I G E + H G Sbjct: 100 SRLAALYAPSARELAETDLTDVYDFSAHSGEPARI------GPFEIHAVPLDH-VCEGWG 152 Query: 176 FRFGN----VAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHSS----HFSLSESLKK 226 R +AY D P + L E Q D L+ +A + H S ++ + Sbjct: 153 LRIAADDRVLAYTGDTG--PCDGLGELAQGADVLLSEASWPDSPDAPPGIHLSGRQAAEA 210 Query: 227 IELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + +LTH+ D +++L FDG Sbjct: 211 AKGGGVGRLLLTHLQPWTDPEVILAEARDG----FDG 243 >gi|317050475|ref|YP_004111591.1| beta-lactamase superfamily hydrolase [Desulfurispirillum indicum S5] gi|316945559|gb|ADU65035.1| beta-lactamase superfamily hydrolase [Desulfurispirillum indicum S5] Length = 258 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 52/220 (23%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++D G + + + SIDA+L +H H+DH+ G ++ + Sbjct: 20 PKTRFLIDAGLNCKSLVQRLNSIGVDEHSIDAILLSHEHSDHVCG-----AGVFSRRFRV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + S D + P+ +N + AG + Sbjct: 75 PVYATQLTGECTVNSVG------DFHQFVPL-------HNSTSFSLGDAGVEV----FSV 117 Query: 167 QHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +GFR + + Y TD + + + L++++ L G + Sbjct: 118 SHDAADPVGFRISSLQNRHLCYVTDTGIYTSLIKQYAIGCHTLVMESNHDEIMLMEGKYP 177 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S E+ ++ + +N IL+H+ Sbjct: 178 WPLKQRVRSRTGHASNREASAFLQEVWWDGMQNVILSHLS 217 >gi|222100685|ref|YP_002535253.1| RNAse Z [Thermotoga neapolitana DSM 4359] gi|221573075|gb|ACM23887.1| RNAse Z [Thermotoga neapolitana DSM 4359] Length = 280 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G L +V + V TH H DHI G+ ++ +++P+DV Sbjct: 21 RILFDAGEGV-STTLGSKVYAFKYVFLTHGHVDHIAGL--WGVVNIRNNGMGDREKPLDV 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + E + KA + + N +E D + G P +H Sbjct: 78 FYPKG-NRAVEEYTSFIKKANPELRFS--FNVHPLEEGDRVFLRDAGGFKRYVQPFRTKH 134 Query: 169 -GRISSLGFRFGNVA------------------------------YCTDVNAFPAESL-- 195 S G+ V Y + +SL Sbjct: 135 VATEVSFGYHIFEVRRKLKEEFQGLDSKVIARLVKEKGRDFVTREYHKKILTISGDSLAL 194 Query: 196 --EKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E+++ + LI + ++ + +H S+ E ++ ++ K IL H+ Sbjct: 195 DPEEVEGTELLIHECTFLDPRDRRYKNHASIDEVMETVKKAGVKRVILYHIS 246 >gi|167563317|ref|ZP_02356233.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis EO147] gi|167570489|ref|ZP_02363363.1| metallo-beta-lactamase family protein [Burkholderia oklahomensis C6786] Length = 258 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 62/176 (35%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L +V +DA+L TH H DH+ Sbjct: 14 ALVVEASNGATTTRVLLDCGFSAKELERRLARLDLRVDELDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + ++A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADDADVDLHVLWSGDEAAL 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGAARLGVLTDVGMSTPHIGAVLGGCDGLVLEA 166 >gi|330981640|gb|EGH79743.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 43 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 2/43 (4%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKIS 45 T+LG G + VP AC N RR S I Sbjct: 1 MRLTLLGTGDARQVPVYGCQCAACTAALTNHDLRRLPCSALIE 43 >gi|310829062|ref|YP_003961419.1| beta-lactamase-like protein [Eubacterium limosum KIST612] gi|308740796|gb|ADO38456.1| beta-lactamase-like protein [Eubacterium limosum KIST612] Length = 236 Score = 63.6 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 42/245 (17%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G P+ G + E G + V+ D G Sbjct: 1 MKLTVLGNTGPY---PKAGGACS------------------GYLLENGDSKVVL-DMGNG 38 Query: 64 FYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 LR + I AV+ +H H DHI + LR + I +YA PD F+ Sbjct: 39 TLAN-LRTICDIEDITAVICSHLHPDHISDLFVLRYALEMRGMTIPLYA-PDSPDKEFDR 96 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 Y + PI + +E + ++ I G+ + Sbjct: 97 LSY----KNVFDLTPITEDLKLEIGGMTFSFMEMRHPLKDFAIKAYDGKST--------F 144 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y D A E + +D L+ D+ L + + H S+ ++++ + ILTH Sbjct: 145 MYTGDT-AMCQALEEFTKGVDVLLCDSAFLDDVDSAIHLSMEKAIQNANNAGVRRLILTH 203 Query: 240 MHVDL 244 ++ Sbjct: 204 FSPEI 208 >gi|305662451|ref|YP_003858739.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] gi|304377020|gb|ADM26859.1| beta-lactamase domain protein [Ignisphaera aggregans DSM 17230] Length = 290 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 95/275 (34%), Gaps = 59/275 (21%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M+ + LG AS+ P +R SSL I GS + +++D Sbjct: 1 MRKNF-IAFLGTAASI----------------PTKKRFTSSLLI-----CGSKSCILLDV 38 Query: 61 GPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-------KQKRPIDVYAA 111 G + LR + I+ + +H H DHI+G+ L + K+ + + Sbjct: 39 GEGTQIRLDELRFDISRIEIIGISHLHGDHIYGLFPLIESLYMRTCSQGRGKKILRIICP 98 Query: 112 ---PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L R + + + E + +KS I +PI H Sbjct: 99 KNFENVISSLLIGGRKN-RRDANECDIELEVVSASELLSNRLSIKSLSEDISIMPIPVNH 157 Query: 169 GRISSLGFRFG-----------NVAYCTDVNAF-PAESLEKLQN--LDFLIIDA------ 208 G + S G+ + Y D E + L+N +D LI +A Sbjct: 158 GDVESYGYVVELRDIGKCHNTIRIFYTGD--GICSNECINTLRNMSIDILISEATFLDYY 215 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +K + H ++ + +N ILTH+ Sbjct: 216 QDIKRAEKTFHSTVYNAANTARELNANLLILTHIS 250 >gi|205356929|ref|ZP_02343450.2| ribonuclease Z [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325433|gb|EDZ13272.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 341 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 85/329 (25%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP T +N +++ + + + D G Sbjct: 35 DKMELIFLGT--SAGVP-----------TRSRNV---TAILLHLQHPKQPGV-WLFDCGE 77 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 78 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 137 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 138 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 186 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 187 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 246 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ I+TH Sbjct: 247 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTH 306 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 307 ISSRYDDKGCQRLLAECRAIFPATELAYD 335 >gi|254481977|ref|ZP_05095219.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] gi|214037667|gb|EEB78332.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] Length = 347 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 17/168 (10%) Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAP 112 ++D+G + R + + +L TH H+DHI I + + + +P+ +Y Sbjct: 84 LIDSGAGSTDNINRLGLPTERLQGLLLTHFHSDHIAEIYEVNLGSWVRGRPQPLTIYGPR 143 Query: 113 DCMK-------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + Y + PP + + + + + G ++ + Sbjct: 144 GVDEVTNGVNASYRQDRIYRTGHHGEDLLPPALGVLQHKTIAPGVIFED--GDLKITAYV 201 Query: 166 QQHGRI-SSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 +H I ++G+RF G + + E+L+ + D L+ DAL Sbjct: 202 AEHPPIHPAVGYRFDYRGRSVVISGDSNVTGETLKIVDGADLLLHDAL 249 >gi|227872293|ref|ZP_03990651.1| beta-lactamase superfamily I metal-dependent hydrolase [Oribacterium sinus F0268] gi|227841865|gb|EEJ52137.1| beta-lactamase superfamily I metal-dependent hydrolase [Oribacterium sinus F0268] Length = 258 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 55 TVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G ++ L I+ + TH H DHI I L +K I VY Sbjct: 23 HILLDAGVGIRSIESALRGLDISCKDIEGICVTHEHIDHIKAIGSL-----CRKYTIPVY 77 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A ++ + K PI+ G + +P H Sbjct: 78 ATLGTLQGILLC--DAMKEFPKDLLRPILK-----------DESFQIGDLSVLPFSVSHD 124 Query: 170 RISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + +R +VA TD+ + ++ LQ LD L+++A Sbjct: 125 TRDPVAYRVSCGEKSVAVVTDLGCYDEYTISHLQKLDVLLLEA 167 >gi|300214764|gb|ADJ79180.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Lactobacillus salivarius CECT 5713] Length = 317 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 85/295 (28%), Gaps = 79/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S ++ + D G Sbjct: 1 MELEFLGTG-----------------AGSPSKSRNVSA-VALKLLDEIKKIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYAAPDCMKHL 118 Q+L + ID + TH H DHI G+ G R + +K P+ +Y + Sbjct: 43 QHQILNTTIRPRKIDKIFITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTIYGPKGISDFV 102 Query: 119 ----------------------------FESFR-YCFK----------ALDDRTYPPIVN 139 + F+ Y +K ++++ YP + Sbjct: 103 NISLKVSQTKLSYELNFVELEEEGLLLENDRFKVYAYKLDHRIECWGYRIEEKDYPGELQ 162 Query: 140 PIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDVNAFPAES 194 + VP AG V+ G+ + G + D P Sbjct: 163 VEKLREAKVPSGPIYGRLKAGEVVTLEDGRTIDGKDFIGKAKKGRIVTILGDTRQTPNLK 222 Query: 195 LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L ++ D L+ ++ L H H + ++ + + K +LTH+ Sbjct: 223 L-LAKDADVLVHESTFGKGEGKLARNYH--HSTCVQAATLAKEVGVKQLLLTHIS 274 >gi|225377508|ref|ZP_03754729.1| hypothetical protein ROSEINA2194_03158 [Roseburia inulinivorans DSM 16841] gi|225210646|gb|EEG93000.1| hypothetical protein ROSEINA2194_03158 [Roseburia inulinivorans DSM 16841] Length = 305 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 83/284 (29%), Gaps = 61/284 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGL---- 95 ++ R + + +++D G + ++E+ ID + +TH HADHI G+ GL Sbjct: 19 WLTAALMRYNGSNLLIDCGEGTQI-AIKEKGWTFKPIDVICFTHYHADHISGLPGLLLTM 77 Query: 96 ----RGYFLKQKRP-----------------------IDVYAAPDCMKHLFESFRYCFK- 127 R L P I++ + M+ + + FK Sbjct: 78 GNAERTETLTMIGPKGLEKVVSALRMIAPELPFEIRYIELTGPEEDME-INGYHIHAFKV 136 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-------- 179 + Y V DV + P+ + + G F Sbjct: 137 NHNISCYGYTVEIRRAGRFDVERARNNHIPQKLWNPLQKGQTVTTEDGITFTPDMVLGTP 196 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIE 228 V YCTD ++ ++ D I D + H + E+ + Sbjct: 197 RKGIKVTYCTDTRP-TENIVKCARHSDLFICEGMYAEKDKIAKAKQYKHMTFYEAADMAK 255 Query: 229 LINPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH DY +K DG Sbjct: 256 RAGVEEMWLTHFSPSLVHAEDYMPEVKKIFPNAYLGKDGKSVEL 299 >gi|294669231|ref|ZP_06734311.1| ribonuclease Z [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308863|gb|EFE50106.1| ribonuclease Z [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 307 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 86/326 (26%), Gaps = 101/326 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT---VIVDTG 61 LG G A P+ +N ++ + + + + D G Sbjct: 1 MELQFLGTG-------------AGSPSKARN--------VTCTALKTGGKSNEVWLFDCG 39 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMK 116 Q+LR + I + TH H DHI G+ GL R + P+ +Y + Sbjct: 40 EATQHQILRTNIRPGKIRRIFITHLHGDHIFGLPGLLSSRSFLGGADEPLCLYGPAGIRR 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + + +YP + V + + G H + S + Sbjct: 100 FVESALE---VSQTQLSYPINFHEFVSDGLILD------DGEFTVRAFGLAHS-LPSFAY 149 Query: 177 RF------------------------------GNVAYCTDVNAFPAESL----------- 195 R G D + Sbjct: 150 RIEEKERAGGLQMERLRELGIPSGPLLGRLKNGETVTLDDGRLIDGKEYLSPPRKGRIIA 209 Query: 196 ------------EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAIL 237 + D L+ +A + H ++S++ K L Sbjct: 210 VFGDTKPCPSAPAAAEGADVLVHEATFAAGDEAMAEKVFHSTVSDAANLAAEAGVKQLYL 269 Query: 238 THMH---VDLDYDMVLKSTPSRVVPA 260 TH+ D + ++L+ + PA Sbjct: 270 THISARYADEEQRLMLERQAQNIFPA 295 >gi|283779406|ref|YP_003370161.1| sulfohydrolase/glycosulfatase, Zn-dependent hydrolase [Pirellula staleyi DSM 6068] gi|283437859|gb|ADB16301.1| Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase [Pirellula staleyi DSM 6068] Length = 253 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 84/222 (37%), Gaps = 35/222 (15%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 +P + R S L I + +++D G FY Q ++D + +H H DH+ G Sbjct: 14 HPSDVRQTSCLMIPELG-------IVLDAGTGFYRTREFLQTSTLD-IFLSHVHLDHVIG 65 Query: 92 IDGLRGYF-LKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDV 148 + L + + + V+ + + + F + P+ P+ I Sbjct: 66 LTYLFNVVDRRDMQRVAVHGEAAKLAAIEKHMLDTTLFPVPLPCQWLPLTGPVAI----- 120 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF-PAESLEKLQNLDF 203 GG + P+ G SLG R G++AY TD A A+ + +++ +D Sbjct: 121 -----GGGGTLRTFPLKHPGG---SLGMRLDFPDGSLAYITDTTAAKSADYVHEIRGVDL 172 Query: 204 LI-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTH 239 LI D ++ + H L+ + K +L H Sbjct: 173 LIHECNFADGYEDWAEKTGHSCLTPVCEVARAAEAKRLVLVH 214 >gi|325679289|ref|ZP_08158874.1| putative ribonuclease Z [Ruminococcus albus 8] gi|324108886|gb|EGC03117.1| putative ribonuclease Z [Ruminococcus albus 8] Length = 304 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 82/279 (29%), Gaps = 74/279 (26%) Query: 52 SNTTVIVDTGPDFYMQVL--REQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 + +++D G + + ++ I+ +L TH HADH+ G+ G L ++ PID Sbjct: 28 NGKAILIDCGEGMQVALASSDLKISRIEMILITHNHADHVTGLPGLLLSMGNCSREEPID 87 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND-VPICMKSAGGVIEAIPILQ 166 +Y + + C + D V ++ + + V ++ + Sbjct: 88 IYLPESAERVVRNLISVCGRLPFD------VRLHMLPDKEAVSFTADKIDPMLTVYTLPV 141 Query: 167 QHGRISSLGFRF---GNVAYCTD---VNAFPAESLEKL---------------------- 198 +H + L + + D P + L Sbjct: 142 RHS-VKCLAYSMLLEKKAVFQPDKAQSLGVPVKMWRVLHSGEAVTLDDGRVIQPDEVLGD 200 Query: 199 -----------------------QNLDFLIIDALKNGLHSS-------HFSLSESLKKIE 228 ++ D I + + H + ++ + E Sbjct: 201 KRPPVKVTYVTDTLPIDPIVNFAKDADLFICEGMYGDADKKQSMNEKGHMLMQDACRLAE 260 Query: 229 LINPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDG 263 K LTH +++ LK V+ + DG Sbjct: 261 KACVKELWLTHYSPAEKHPENFEKELKKLFPNVIISKDG 299 >gi|260592422|ref|ZP_05857880.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] gi|260535658|gb|EEX18275.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] Length = 242 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 84/228 (36%), Gaps = 50/228 (21%) Query: 57 IVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++D G L++ + + +L TH HADH+ + + G + VY Sbjct: 1 MIDCGVGVRS--LKKSFHNYGLQMQMVHNILITHDHADHVKSVGSISG-----DLRLPVY 53 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + + +C + D + +++N +V I G P H Sbjct: 54 TTSEVHAGISRN--WCVRRKIDHE----LARELVKNEEVQI------GEFYVTPFTVPHD 101 Query: 170 RISSLGF--RFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF- 218 +G+ R ++ + TD E + ++L+I+A L +G + H Sbjct: 102 SSDCVGYSIRHDDICFTLVTDCGHITDEIAHYVSISNYLVIEANHEPGKLASGPYPLHLK 161 Query: 219 --------SLS-ESLK--KIELINP--KNAILTHMHVDLDYDMVLKST 253 LS E+ ++ +P ++ L H+ + ++ + K T Sbjct: 162 ERIGGPNGHLSNEACANTLVDNASPCLRHVWLCHLSDENNHPELAKKT 209 >gi|70726413|ref|YP_253327.1| hypothetical protein SH1412 [Staphylococcus haemolyticus JCSC1435] gi|123660271|sp|Q4L6K4|RNZ_STAHJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|68447137|dbj|BAE04721.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 306 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 93/300 (31%), Gaps = 74/300 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQA---IALNLEPFSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ V Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTVIGPRGLQQFIE 102 Query: 112 ------------PDCMKHLFESFRYCFKALDDRTY-----PPIVNPIVIENNDVPICMKS 154 P + F Y K + P + Sbjct: 103 TTLRLSESHLNYPITYIEIDNHFTYHHKGFSISAHLLNHGIPSYGYRIESPTTPGTIDVE 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE----------------SLEKL 198 A I P + S F Y +D PA+ L Sbjct: 163 ALKSIGLYPGPKYQEVKSYDNFEHEGQVYNSDDFKGPAKPGPIISIFGDTKPCQSELSIA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 ++ D +I +A L N H SH + + + I+ N K ++TH+ +++ + Sbjct: 223 KDSDVMIHEATYIEGEKTLANNYHHSH--IEDVFELIKQANVKRCLITHLSNRYNHENIQ 280 >gi|322385037|ref|ZP_08058687.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] gi|321270947|gb|EFX53857.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus cristatus ATCC 51100] Length = 268 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 91/282 (32%), Gaps = 72/282 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + ++IL G+S G C +R L + T+++ + Sbjct: 3 MTKGFQYSILASGSS----------GNCFYLETDQKR----LLVDAGLSGKKITSLLSE- 47 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + + +DA+L TH H DHIHG+ L +K +D+YA + + + Sbjct: 48 --------IDRKPEDLDAILVTHEHKDHIHGVG-----VLARKYNLDIYANEATWRAMEK 94 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + E + G ++ H + +RF Sbjct: 95 DLGKLDASQK----------HIFEMGKMK-----TFGDLDVESFGVSHDAAAPQFYRFMK 139 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFS 219 + TD ++N D +LI I+ L++G + H S Sbjct: 140 DGKSFVMLTDTGYVSDRMAGVIENADAYLIESNHDIEILRSGAYPWSLKQRILSDLGHLS 199 Query: 220 LSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 + + I + K L H+ +L + ++ Sbjct: 200 NEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQL 241 >gi|332159416|ref|YP_004424695.1| ribonuclease Z [Pyrococcus sp. NA2] gi|331034879|gb|AEC52691.1| ribonuclease Z [Pyrococcus sp. NA2] Length = 307 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 52/179 (29%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G P R S+ I E + D G Sbjct: 2 IEVIFLGTGGIKPTPE----------------RNVPSIAIRIDGEI-----TLFDAGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + + + TH H DH GI L K++ P+ +Y + Sbjct: 41 LRQMEIAGISPMKVKRIFITHFHGDHYLGIPALVQTMSLWKRRDPLHIYGPEGASTFI-- 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + L Y P + +++P + E HG I +LG+ F Sbjct: 99 ------ENLLKSGY--FEPPFDVIVHEIPGKYRLKFENYEIWSFEVSHG-IPALGYVFK 148 >gi|260663645|ref|ZP_05864534.1| ribonuclease Z [Lactobacillus fermentum 28-3-CHN] gi|260551871|gb|EEX24986.1| ribonuclease Z [Lactobacillus fermentum 28-3-CHN] Length = 310 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 84/292 (28%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + ER + + D G Sbjct: 1 MQIEFLGTGAGS----------------PSKQRNVSSLALRLLEERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------P 112 Q+L + ++ + TH H DHI G+ G R + P+ +Y Sbjct: 43 QHQILHTTIRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIYGPKGIKDFVQ 101 Query: 113 DCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQH 168 +K Y F+ L + + + S G +E A P Sbjct: 102 TALKVSESRLSYPLKFEELTGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMV 161 Query: 169 GRISSLGFRFGN---------------------------------VAYCTDVNAFPAESL 195 ++ G G VA D ++ Sbjct: 162 EKVRQAGIPSGPLYGQLKRGEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDT-RVTDNAV 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + D L+ +A + + H + +++ + + +L H+ Sbjct: 221 KLAKGADVLVHEATFAKNEQRLAHNYYHSTSAQAATVAKKAGAQRLLLNHIS 272 >gi|239624566|ref|ZP_04667597.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239520952|gb|EEQ60818.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 290 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 80/241 (33%), Gaps = 67/241 (27%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--R 96 +SL ++ G ++ VD + V+ V DAV+ TH H DH++G+ L + Sbjct: 20 NTSLLVT-----GKEGSLAVDLSCNLAA-VVNAGV---DAVILTHEHIDHVYGLPSLLHQ 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + + +++Y ++ L + + F + + N I P+ Sbjct: 71 MWIAGRGKALNIYVPQG-LEQLADGLIHLFGLREKK------NMFEIRLRTEPV---FCV 120 Query: 157 GVIEAIPILQQHGRISSLGFRFGN------------------------VAYCTDV---NA 189 G ++ H + S+G + + Y D Sbjct: 121 GTMKVTTFPTDHTEM-SIGVVIEDGMEGSMGDGMEDTIEDVMKDVRSKLVYTCDTRPLRD 179 Query: 190 FPAESLEKLQNLDFLIIDA----------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 P ++ LI +A L+ G H S +++ K + L H Sbjct: 180 IP----SFMEGAQVLIHEASGLSKEEEALLRKG----HSSGADAGKMARELGVDKLYLCH 231 Query: 240 M 240 + Sbjct: 232 L 232 >gi|168187919|ref|ZP_02622554.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] gi|169294233|gb|EDS76366.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] Length = 243 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 79/235 (33%), Gaps = 32/235 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + + +++D G +V + IDAV+ +H H DH ++ + I Sbjct: 25 QSGDHNILIDCGSGVLSKVQNYVPLSKIDAVILSHYHGDHAA---DIKALQYSAQIDI-- 79 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + E+ + + + + + + + + G ++ +H Sbjct: 80 ------KNKIRENELQIYSHDLSDDFKSLTLEGISKWHKIDDATEIQIGDLKVNFKWGKH 133 Query: 169 GRISSLGFRFGN----VAYCTD---VNAFPAESLEKLQNLDFLIIDA--LKN--GLHSSH 217 + SL RF Y D + S ++ D I + L G H Sbjct: 134 -LVPSLAMRFEKNGKVFVYSGDTEWCDGILDIS----KDADLFICETNFLNKDIGRGKGH 188 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS----RVVPAFDGMQFSS 268 + E K + N +L+H+ + D + +L + A+ G +F+ Sbjct: 189 LTSGEVGKIANMNNVDKLVLSHIPHNTDLNELLNEAKEEFSGEIYKAYSGEEFNL 243 >gi|309390252|gb|ADO78132.1| beta-lactamase domain protein [Halanaerobium praevalens DSM 2228] Length = 272 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +V+VD G + M L +DA+L TH H DHI I L ++ Sbjct: 20 RAGKNSVLVDAGLSGKAIEARMNCLGLDPADLDALLVTHEHKDHIKSIG-----VLSRRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA + I EN V G ++ P Sbjct: 75 KIPIYANDGTWGAAEAD----------------LGKIKAENKRV-FTGDFLVGNLKFSPY 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 H +G+ + TD AE + K++ DF +++ Sbjct: 118 SLSHDAAQPVGYTCQVEDKKIVVATDTGLMSAEVIAKIKGADFYVLE 164 >gi|11499738|ref|NP_070980.1| hypothetical protein AF2155 [Archaeoglobus fulgidus DSM 4304] gi|2648359|gb|AAB89085.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 234 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 92/286 (32%), Gaps = 74/286 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G S+ P ++ +SS+ + + ++ D G Sbjct: 1 MRLTFLGTGVSV----------------PYGKKAQSSILL-----DTGESKILFDCGIGS 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYAAPDC---MKHL 118 Y ++ + V +IDAV TH H DH + L+ +L + ++ M+ L Sbjct: 40 YHRLEQLGVSVNNIDAVCITHHHLDHNGDLLNILKARWLLGGGVLKIFGPKGTKSFMESL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E++ Y + IV E ++ I H I S G+ Sbjct: 100 LEAYPYL---------RGKLKFIVDEGEAFDE-------SVKIRAIPTVHS-IESRGYVV 142 Query: 179 GN-VAYCTDVNAF------------PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 + VA D A SL D+ H++ +L E+L Sbjct: 143 EDTVAISGDTRAIKEFISVECSLMVHELSLPFNYQADY----------HTTPENLKENL- 191 Query: 226 KIELINPKNAILTH---MHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH M + D +++ V A D M Sbjct: 192 --RYCKAEKLYLTHLYPMAHAVK-DEIIEYLEFDAVVADDMMSIRL 234 >gi|194444117|ref|YP_002041574.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195874003|ref|ZP_02699856.2| ribonuclease Z [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205360448|ref|ZP_03224628.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194402780|gb|ACF63002.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195631428|gb|EDX49988.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205349465|gb|EDZ36096.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 341 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 81/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 35 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 77 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 78 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 137 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 138 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 186 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 187 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 246 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ I+TH Sbjct: 247 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTH 306 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 307 ISSRYDDKGCQRLLAECRAIFPATELAYD 335 >gi|319892488|ref|YP_004149363.1| Ribonuclease Z [Staphylococcus pseudintermedius HKU10-03] gi|317162184|gb|ADV05727.1| Ribonuclease Z [Staphylococcus pseudintermedius HKU10-03] gi|323464409|gb|ADX76562.1| ribonuclease Z [Staphylococcus pseudintermedius ED99] Length = 305 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 96/296 (32%), Gaps = 84/296 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E + + D G Sbjct: 1 MEITFFGT--SAGLPT-------------KERHTQS---IALKLEPYATDVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + + + TH H DH+ G+ G+ R + + +P+ V K + Sbjct: 43 QHQILHHSIKLGKVSHIFITHMHGDHVFGLPGVLTSRSFQGGESKPLTVIGP----KGIK 98 Query: 120 ESFRYCFKALDDRTYPPI------------VNPIVIENNDVPICMKSAGGVIEA--IPIL 165 + Y P+ +N + + + G I+A P Sbjct: 99 DYVEYNLSLTYSHLNYPLHIIEIEDQMNLSINGFEVNARPLNHGIPCFGYRIQAPDTPGK 158 Query: 166 QQHGRISSLG---------------FRFGNVAY-CTDVNAFPAE---------------- 193 ++ +LG F F Y D P + Sbjct: 159 LDVQKLQALGMPPGPQYQKVKSQDTFEFEGQIYNANDFKG-PDKKGQVVTIFGDTRPSQY 217 Query: 194 SLEKLQNLDFLI-----ID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +LE ++ D L+ ID L N H SH + + L IE + K+ +LTH+ Sbjct: 218 ALELAKDADVLVHESTYIDGDKTLANAYHHSH--IEDVLALIEKASVKHGLLTHIS 271 >gi|306829562|ref|ZP_07462752.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] gi|304428648|gb|EFM31738.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus mitis ATCC 6249] Length = 269 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 82/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILIDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|209963920|ref|YP_002296835.1| hypothetical protein RC1_0586 [Rhodospirillum centenum SW] gi|209957386|gb|ACI98022.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 276 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 41/233 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + + T+++D G + R+ + +L TH H DHI G +F Sbjct: 29 SCVEVQAGDRTLLLDAGSGLRAAGKHLRRDGIKHA-TMLVTHTHWDHITGF----PFFE- 82 Query: 102 QKRPIDVYAAPDCMK----------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y M + E+ C ++ + + + P Sbjct: 83 -----PAYCPDFSMDILGGHLQGVACISEALATCMESPLFPVPLETMRADLRFSWIQPGD 137 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDF 203 + I H ++G+R +V Y TD P A L ++ D Sbjct: 138 VLDIDRGITIRTASMNHPG-GAIGYRIECAGRSVCYVTDTEHVPGLMDASILRLIEGADM 196 Query: 204 LIIDALKN------GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 +I DA H + SE +K + + L H D D+D Sbjct: 197 VIYDASYTDEEFEQRRGWGHSTWSEGVKLCQEAGARRLCL--FHHDPDHDDAA 247 >gi|256809983|ref|YP_003127352.1| beta-lactamase domain-containing protein [Methanocaldococcus fervens AG86] gi|256793183|gb|ACV23852.1| beta-lactamase domain-containing protein [Methanocaldococcus fervens AG86] Length = 266 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 93/297 (31%), Gaps = 75/297 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT------TVI 57 LGCG G W I++ G + Sbjct: 2 RVEIVFLGCG--------GGRWAT----------------ITQKKATGGFRIHTNELRMH 37 Query: 58 VDTGPD--FYMQVLREQVLSIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKR 104 VD GP + L+ +A+ +H H DH G+ RG FL Sbjct: 38 VDPGPGAIVRLNELKISPWRTNALFISHCHPDHYTDGEVIVEAMTQGMTKKRGIFLGNLS 97 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ + +++ + + YP + Sbjct: 98 VVEGFGE---YEYVISKYHQSKLEKVNVLYPG---------------DEMELYDTTIKAT 139 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--NGLHSSHF 218 +HG +GFR G++ Y +D P + + LI + ++ N H Sbjct: 140 HTKHGDPFGIGFRLSTIYGDIGYTSDTELIPELIKDF-DGVRILIANIVRKKNERIRGHL 198 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 ++++ I + P+ I+ HM + + + + + ++T V+PA G++ Sbjct: 199 CSNDAIDLINSMSKKPELLIMNHMGIKMTNPQIEAEYISQNTGIEVIPARLGLKVEL 255 >gi|312132176|ref|YP_003999516.1| ribonuclease z [Leadbetterella byssophila DSM 17132] gi|311908722|gb|ADQ19163.1| ribonuclease Z [Leadbetterella byssophila DSM 17132] Length = 299 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FTILG G++ P R S+ + +E ++++D G Sbjct: 1 MKFTILGTGSAT----------------PITERRPSAALLDLGNE-----SILLDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L+ +V I +L TH H DH G+ L R P+ + + Sbjct: 40 QFQMLKYKVRFSRIKYILITHLHGDHFFGLIALLNTLNNTGRTEPLVLIGPHGLQDIIGV 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 RY L+ NP E + I I +H RI G+ Sbjct: 100 QLRYSLSFLNYTIDYRTTNPGAFEE-------VFSNEKISISTIPLKH-RIPCTGYLI 149 >gi|159185275|ref|NP_355517.2| metal dependant beta lactamase protein [Agrobacterium tumefaciens str. C58] gi|159140535|gb|AAK88302.2| metal dependant beta lactamase protein [Agrobacterium tumefaciens str. C58] Length = 286 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 82/221 (37%), Gaps = 39/221 (17%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + R + ++ D G + L E + ++ + ++H H DHI G + + Sbjct: 43 CIEVRCGDHVLLFDAGSGLHPAGLALRAEGITDVN-LFFSHCHYDHIVGFPYFKPF-YNS 100 Query: 103 KRPIDVY----AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++ A + + + F + P P+ I + AG V Sbjct: 101 SNDVAIWSGHLAGSMTTREMLKDF---------MSPPWFPVPLEICCAKIATRDFKAGDV 151 Query: 159 IEAIP------ILQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFL 204 ++ P + H +++G+R ++A TD ++ L+ ++++D Sbjct: 152 LDVHPGLSIRTGMLNHPG-NAIGYRLDWEGKSLAIITDTEHEPSSIDETVLDLIRDVDLF 210 Query: 205 IIDALKNG------LHSSHFSLSESLKKIELINPKNAILTH 239 + DA+ H S ++++ +L + KN H Sbjct: 211 LYDAMFTDEEMGLYRGYGHSSWQQAIRLAKLADAKNVGFIH 251 >gi|288959477|ref|YP_003449818.1| beta-lactamase superfamily hydrolase [Azospirillum sp. B510] gi|288911785|dbj|BAI73274.1| beta-lactamase superfamily hydrolase [Azospirillum sp. B510] Length = 295 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 82/251 (32%), Gaps = 42/251 (16%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSID-AVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R ++ D G + L +D +L TH H DHI G+ F R + Sbjct: 55 RCPGAHIVFDCGTGIRPLGESLAHDGGPVDIDLLLTHSHLDHISGLPFFAPAFDPASR-L 113 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP--- 163 ++A HL + D T P P+ I D AG ++ P Sbjct: 114 RLWA-----GHLPPERPFRTVLADMMTAPLFPVPVEIFRADCQFRDFQAGQTLDLAPGVV 168 Query: 164 ---ILQQHGRISSLGFRFG----NVAYCTDVNAFPAE-----SLEKLQNLDFLIIDALKN 211 H + G+R ++ TD PAE L+ L+ D ++ D Sbjct: 169 VRTCRLNHPD-GATGYRVEQGGRSLCILTDTEH-PAEGRDPVILDLLRGADVMVYDCTYT 226 Query: 212 G-LHSS-----HFSLSESLKKIELINPKNAILTHMHVD-------LDYDMVLKS-TPSRV 257 + S H + E L+ E A++ H D LD Sbjct: 227 DAEYPSRVGWGHSTWQECLRLAEAAGVGRAVI--FHHDPARTDDMLDVIAAEAEAMRPGS 284 Query: 258 VPAFDGMQFSS 268 + A +GM+ S Sbjct: 285 LVAREGMELSL 295 >gi|212640653|ref|YP_002317173.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] gi|212562133|gb|ACJ35188.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Anoxybacillus flavithermus WK1] Length = 265 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 76/250 (30%), Gaps = 54/250 (21%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S ++VD G + + + I +L TH H+D Sbjct: 4 MRFSVLASGSTGNAFYVETKQERLLVDAGLSGKQLEKLFADIDRHIEDITGILVTHEHSD 63 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ + +K + +YA K + I + + + Sbjct: 64 HIKGLG-----VIARKYRLPIYANEKTWKAMDGI---------------IGDIPLEQKFI 103 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 P G ++ H + + F + TD +++ D Sbjct: 104 FPTGSVRTFGDLDVESFGVSHDAAEPMFYVFHYEGKKLVLITDTGYVSERMKGVIRHADV 163 Query: 204 LI------IDALKNGLHS-----------SHFSLSES-LKKIELIN--PKNAILTHMHVD 243 + ++ L+ G + H S ++ L ++I K L H+ D Sbjct: 164 FVFESNHDVEMLRMGKYPWNIKRRILSDVGHVSNEDAGLALADVIGDQTKRIYLAHLSQD 223 Query: 244 LDYDMVLKST 253 + + + T Sbjct: 224 NNMKELARMT 233 >gi|301300910|ref|ZP_07207082.1| ribonuclease Z [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851509|gb|EFK79221.1| ribonuclease Z [Lactobacillus salivarius ACS-116-V-Col5a] Length = 317 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 79/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S ++ + D G Sbjct: 1 MELEFLGTG-----------------AGSPSKSRNVSA-VALKLLDEIKKIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYAAPDCMKHL 118 Q+L + ID + TH H DHI G+ G R + +K P+ +Y + Sbjct: 43 QHQILNTTIRPRKIDKIFITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTIYGPKGISDFV 102 Query: 119 ----------------------------FESFR-YCFK----------ALDDRTYPPIVN 139 + F+ Y +K ++++ YP + Sbjct: 103 NISLKVSQTKLSYELNFVELEEEGLLLENDRFKVYAYKLDHRIECWGYRIEEKDYPGELQ 162 Query: 140 PIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDVNAFPAES 194 + VP AG V+ G+ + G + D P Sbjct: 163 VEKLREAKVPSGPIYGRLKAGEVVTLEDGRTIDGKDFIGKAKKGRIVTILGDTRQTPNLK 222 Query: 195 LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + ++ D L+ ++ L H H + ++ + + K +LTH+ Sbjct: 223 I-LAKDADVLVHESTFGKGEGKLARNYH--HSTCVQAATLAKEVGVKQLLLTHIS 274 >gi|291546271|emb|CBL19379.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus sp. SR1/5] Length = 265 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V+VD G + + L +D +L TH H+DHI G+ + +K I Sbjct: 20 EEAHVLVDVGISGKSIEKGLNSLDLTGKDVDGILITHEHSDHIKGLG-----VISRKYGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + K + +++ + P Sbjct: 75 PIYTTGGTADAML-RMKSLGKMPEGL------------IHEIREDEPFGIKDLTVNPFTI 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H +G+R +V TD+ + ++ L+NLD ++++A L+ G + Sbjct: 122 PHDAAQPVGYRLECGEHSVGIATDLGKYNDYIVKNLENLDAVLLEANHDIRMLQVGKYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + + + I N K L H+ + +Y+ + T Sbjct: 182 YLKQRILGDRGHLSNENAGRLLCRILHDNLKAVFLGHLSRENNYEELAYET 232 >gi|227357968|ref|ZP_03842310.1| ribonuclease Z [Proteus mirabilis ATCC 29906] gi|227161703|gb|EEI46735.1| ribonuclease Z [Proteus mirabilis ATCC 29906] Length = 317 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 80/305 (26%), Gaps = 101/305 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A GVP + R +S+ + + + + D G Sbjct: 13 MELTFLGTNA--GVP----------SKD----RNVTSMVLDL--QNKQKSLWMFDCGEAT 54 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPIDVYAA----PDCM 115 Q+L V I+ + TH H DHI G+ GL P+ +Y Sbjct: 55 QHQILHSHVKLSRINKIFITHLHGDHIFGLPGLLC-SRSMGGTENPLTIYGPTGIKAFIE 113 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L S Y LD +IE + G + + + G Sbjct: 114 TALTLSQSYLTYPLD-----------IIEIEQDGFLFEEEGIRVSCGALSHP---VPCFG 159 Query: 176 FRF------------------------------GNVAYCTDVNAFP-------------- 191 +R G D Sbjct: 160 YRLEEDNKPGKLNADKLEAENIPRGPWYKLLKQGKTVTLPDGRIIDGKDYLSTEIKGRCI 219 Query: 192 ---------AESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAI 236 +++ +N D ++ +A H S ++ + + N K I Sbjct: 220 VIFGDTQPTPNAVKLAENADVIVHEATFKHDMADKANSRGHSSTIQAAELAKKANAKRLI 279 Query: 237 LTHMH 241 +TH+ Sbjct: 280 ITHIS 284 >gi|149927494|ref|ZP_01915748.1| Beta-lactamase-like protein [Limnobacter sp. MED105] gi|149823767|gb|EDM82993.1| Beta-lactamase-like protein [Limnobacter sp. MED105] Length = 251 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 104/284 (36%), Gaps = 57/284 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGC S+G+P +S I ++ +++D G ++ Sbjct: 1 MLGCSGSIGIPGQGT----------------TSFLI--------DSDILIDAGTGL-CEL 35 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ I+ V TH H DHI G+ L + +K P+ VYA ++ L + + F Sbjct: 36 DFARLEQIEHVFITHSHLDHICGLPFLIDTVGVGRKSPLRVYATLPTIRALQQ---HIFN 92 Query: 128 A--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 D + P V+E ++ + G + + H + ++G G Sbjct: 93 EEIWPDFSKIPTAENPVLEYVEIKPEQELLFGERKITTVEVDH-TVPAVGVFLTTPTGGW 151 Query: 182 AYCTDVNAFPAESLEKL---QNLDFLIIDALKNGL------HSSHFSLSESLKKIELINP 232 + D + + + +D+ I+A + H S +++ +N Sbjct: 152 CFSGDTHK-TDRLFTLINQAKKVDYFFIEAAFPDKEKWLADLAKHLCPSLLFGELQKLNA 210 Query: 233 K-NAILTHMHVDLDYDMVLKST-------PSRVVPAFDGMQFSS 268 ++H+ ++D + K P R++ A GM F+ Sbjct: 211 ACEIWISHL-KPREHDEIQKELQQYPGSQPLRILSA--GMIFNI 251 >gi|227548660|ref|ZP_03978709.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] gi|227079274|gb|EEI17237.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] Length = 256 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 48/254 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC SL P NP SS I+ G +++D GP Sbjct: 1 MKLTILGCSGSLAAP-----------GNPG-----SSYLITVPGRSG----ILMDCGPGA 40 Query: 65 YMQVLREQVLSID-AVLYTHPHADHIHGIDGLRGYFLK------QKRPIDVYAAPDCMKH 117 L+E D VL++H HADH L + ++R + ++ H Sbjct: 41 LA-ALQEVHDPADVHVLFSHLHADHCSDTASLAIWRRFHPTAPARQRHM-MFGPSYTKLH 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + +DD I + + ++ I P+ +H + S R Sbjct: 99 IGRMGADGPDEVDD-----ITDTFDVSTWVANKAVE--IDDITVTPVPVEHTALESHALR 151 Query: 178 FGN------VAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKK 226 +A+ D + ++ ++ D + +A + H S +++ + Sbjct: 152 VAERSTGKVLAFSGD-SGMTPTLVDAARDADIFLCEAAWGPSAEGKPGGMHLSGAQAGEI 210 Query: 227 IELINPKNAILTHM 240 K +L H+ Sbjct: 211 ARRAGVKTLVLVHI 224 >gi|295706507|ref|YP_003599582.1| ribonuclease Z [Bacillus megaterium DSM 319] gi|294804166|gb|ADF41232.1| ribonuclease Z [Bacillus megaterium DSM 319] Length = 309 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +R SSL + + ERG+ + D G Sbjct: 1 MELLFLGTGA--GVPA--------------KQRNVSSLALELLQERGAV--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI+G+ GL G Q + VY K + E Sbjct: 43 QHQILHTTVKPRRIEKIFITHLHGDHIYGLPGLLGSRSFQGGESLLTVYGP----KGIKE 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 P+ + E ++ + +E +HG I S G+R Sbjct: 99 FIEVTVAVSQTHLQYPLEIVEIEEESESGTIFEDETFSVEF--GKLEHG-ILSYGYRV 153 >gi|147677125|ref|YP_001211340.1| metal-dependent hydrolases [Pelotomaculum thermopropionicum SI] gi|146273222|dbj|BAF58971.1| metal-dependent hydrolases [Pelotomaculum thermopropionicum SI] Length = 258 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 23/217 (10%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 R+ S R V++D+G +++ S+DAV+ +H H DH + LR Sbjct: 14 RAGGACSGYLLRAGGLNVLLDSGNGTLSRMMSFIDFRSLDAVIISHLHHDHYLDLFSLRH 73 Query: 98 YFLKQKR------PIDVYAA--PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 +R P+ ++ P+ ++ F+ + P + Sbjct: 74 AVEGARRAGTLAGPLRLFIPPVPETDFETLAGYKKAFETTPIESLPA----EKVAGGFTA 129 Query: 150 ICMKSAGGVIEAIPILQ--QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + V +P +S G G + Y D E + + + Sbjct: 130 RRLDLKRLVFRFVPARHALPGYSVSVEGD--GKLVYSGDTVR-TEELVALASGAGLFLCE 186 Query: 208 AL-----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 A L +H + ++ + + +LTH Sbjct: 187 ASGLNSDAEYLKDNHLTAGQAGELAREAGVRRLLLTH 223 >gi|171780119|ref|ZP_02921023.1| hypothetical protein STRINF_01907 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281467|gb|EDT46902.1| hypothetical protein STRINF_01907 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 269 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 78/246 (31%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ L ++ + Sbjct: 25 PQKCLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VLARRYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I V + + G I+ Sbjct: 80 DVYANAKTWQMIDERNM-------------IGKLDVGQKHVFERGKTLTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L+ G + Sbjct: 127 SHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAGVIENADGYLIESNHDVEILRAGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I I K L H+ +L + + + + Sbjct: 187 SLKQRILSDRGHLSNEDGADTMIRTIGNRTKRIYLGHLSKENNIKELAHMTMENNLMQAN 246 Query: 257 VVPAFD 262 D Sbjct: 247 FAVGHD 252 >gi|183222244|ref|YP_001840240.1| putative metallo-beta-lactamase superfamily protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912296|ref|YP_001963851.1| metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776972|gb|ABZ95273.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780666|gb|ABZ98964.1| Putative metallo-beta-lactamase superfamily protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 315 Score = 63.2 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 97/270 (35%), Gaps = 64/270 (23%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFY---MQVLREQVLSID---AVLYTHPHADHIHGID 93 + + I VI+D G Q+ E D +L +H H DHI G Sbjct: 65 TCVLIE----GDGGERVILDMGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQG-- 118 Query: 94 GLRGYFLKQKRP---IDVY-AAPDCMKHLF-----ESFRYCFKALDDRTYPPIVNPIVIE 144 +F P I Y P+ + L E+F F+ + + + + + Sbjct: 119 --WPFFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQMASKK-----HFHLWK 171 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA------ES 194 + + G ++ IP +H S G+R +CTDV + Sbjct: 172 EFESYML-----GGLKIIPFGLRHPG-SCTGYRIREGNKIFLFCTDVEYREEDREHLLKM 225 Query: 195 LEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY-- 246 ++ D +IIDA + + H ++S++++ E++ ++ +LTH + D+ Sbjct: 226 KPQIAGADLIIIDAQYSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTH--HEPDHTD 283 Query: 247 --------DMVLKSTPSR--VVPAFDGMQF 266 D P V A +G +F Sbjct: 284 HEVARIILDEARLLKPGGMQVHIAHEGQKF 313 >gi|303389544|ref|XP_003073004.1| ribonuclease Z [Encephalitozoon intestinalis ATCC 50506] gi|303302148|gb|ADM11644.1| ribonuclease Z [Encephalitozoon intestinalis ATCC 50506] Length = 596 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 79/260 (30%), Gaps = 49/260 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G ++ P+ +N +S + ++ +++D G D Sbjct: 316 SILFLGTGCAI-------------PSKYRN--------VSGILYESTDRAIMLDCGEDTL 354 Query: 66 MQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA----PDCMK 116 Q+ R + + A+ +H HADH+ GI K + V+A P Sbjct: 355 FQIHRAYGGFDVLKKLKAIFISHSHADHMLGI---ISVLKKVGHRVKVFAPVVIRPFVEC 411 Query: 117 HLFESFRYC------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + Y + R + + N + H Sbjct: 412 FGAGDYEYIETNHAKIAEREFRGDLGSMGEFSLGNINAEDYFLKFDVGFRISICGVDHCS 471 Query: 171 ISSLGFRFGN----VAYCTDVN-----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 S G R + + Y D + + + + + D + +H+ H ++ Sbjct: 472 -DSCGIRIQDDTTVITYSGDSRPSILFGIMSSDSDVMIHEATFVFDQQERAMHTGHSTVD 530 Query: 222 ESLKKIELINPKNAILTHMH 241 +++ K +LTH Sbjct: 531 GAVEVFRSSRSKVLLLTHFS 550 >gi|291513679|emb|CBK62889.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Alistipes shahii WAL 8301] Length = 246 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 77/239 (32%), Gaps = 59/239 (24%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++++ G F Q L + + L TH H DH I+ + K + Sbjct: 18 ENDREALLLEAGVRFASVKQALDYNITKVVGCLITHEHKDHAGYINEVL------KATVP 71 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA+ +++ PI P G IP + Sbjct: 72 VYASAGTIENT-----------------PIEGPRRANVCKAGTLFTLGG--FRIIPFGTK 112 Query: 168 HGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQN--------LDFLIIDA------ 208 H LGF GN+ + TD P + L N LD L DA Sbjct: 113 HDSAEPLGFFINHEETGNILFATDTYYLPCK-FAGLNNVLIECNYRLDLL--DANIAAGR 169 Query: 209 ----LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 ++N SH S ++L+ ++ N +L H+ D + + + V A Sbjct: 170 IPAVVRNRTLKSHLSYDHCVQALQANDIKGVNNIVLIHLS---DGNSNAEQFRAGVRAA 225 >gi|251800209|ref|YP_003014940.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247547835|gb|ACT04854.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 268 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 90/275 (32%), Gaps = 79/275 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT+LG G S G + + V+VD G Sbjct: 3 LTFTVLGSG-STG---------------------------NATIVSNGDKMVLVDAGLSM 34 Query: 65 Y--MQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 +++R+Q + A+ TH H+DHI G+ +K + ++A + Sbjct: 35 KKIEELMRDQGVSGHQLSALFVTHEHSDHIKGLG-----AFARKYELPIFANEGTWGGME 89 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 + R +++E + G +E H +G+ F Sbjct: 90 RHVGNI--EPEKR--------VIMETGE-----SLRFGTMEVCSYPISHDAAEPVGYTFV 134 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHF 218 ++ TD+ + + + + D L++++ L+ G + H Sbjct: 135 DNGEKLSLATDLGYMSDKVKQAIIDSDVLVLESNHDTEMLRMGRYPWNIKRRILSDVGHL 194 Query: 219 SLSESLKKIELI---NPKNAILTHMHVDLDYDMVL 250 S + + + + K L H+ LD++++ Sbjct: 195 SNVAAGEALCELLTDRTKRVYLAHLS--LDHNLMD 227 >gi|254785151|ref|YP_003072579.1| metallo-beta-lactamase family protein [Teredinibacter turnerae T7901] gi|237687451|gb|ACR14715.1| metallo-beta-lactamase family protein [Teredinibacter turnerae T7901] Length = 254 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 64/207 (30%), Gaps = 50/207 (24%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + ++VD G +L I AVL TH HADHI G+ L ++ Sbjct: 20 RVGDQCLLVDCGFTLRELEKRLALLELSAADITAVLVTHEHADHIKGVGPLA-----RRH 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I VY C + R P D P + I P+ Sbjct: 75 TIPVYMTSGSFIS-----GKCGEIPHFRAVLP----------DQPFQIH----DITVTPV 115 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H F F + TD+ L + Q L+++A L NG + Sbjct: 116 AVPHDAREPCQFVFSYQGMKLGILTDLGTITPHVLSQYQGCHGLLVEANHDLTMLANGPY 175 Query: 215 SS-----------HFSLSESLKKIELI 230 H + ++ ++ I Sbjct: 176 PPSLRARVGSNWGHLNNQQTSAFLQQI 202 >gi|268591447|ref|ZP_06125668.1| ribonuclease Z [Providencia rettgeri DSM 1131] gi|291313101|gb|EFE53554.1| ribonuclease Z [Providencia rettgeri DSM 1131] Length = 304 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 82/301 (27%), Gaps = 94/301 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R +S+ ++ V R + + D G Sbjct: 1 MELTFLGT--SAGVPT--------------KERNVTSMILNLVGIR--KSYWLFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLF 119 ++L I+ + TH H DHI G+ GL D VY ++ Sbjct: 43 QHRILNSPFKTPKIEKIFITHLHGDHIFGLPGLLC-SRSMGGATDLLTVYGPKGLKHYIE 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 ++ TYP +E ++ G + H R+ G+R Sbjct: 102 TVLA---VSVSYMTYP-------LEIVEIEAGQLFDDGELIVTAYALDH-RVECYGYRIE 150 Query: 179 -------------------------------------GNVAYCTDVNAFP---------- 191 G V D P Sbjct: 151 GHPKSGALDAVKLANDNIPRGPWMQALKAGETIVLDDGRVVNGADYLGEPIPGKVVAIFG 210 Query: 192 -----AESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 ++LE +N D +I + + H + ++ + K I TH+ Sbjct: 211 DTQPTEQALELARNADVMIHETTLEAEFAQKANERGHSTTVQAAELARAAGVKRFIATHI 270 Query: 241 H 241 Sbjct: 271 S 271 >gi|322372855|ref|ZP_08047391.1| VicX protein [Streptococcus sp. C150] gi|321277897|gb|EFX54966.1| VicX protein [Streptococcus sp. C150] Length = 270 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 73/236 (30%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + +DA+L TH H DHIHG+ L +K + Sbjct: 26 PEKKILIDAGLSGKKITNLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + G I+ Sbjct: 81 DIYANEKTW-QIMDSKNMLGKVDNSQK------------HVFSRDKIMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 128 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L + + Sbjct: 188 STKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTMENQL 243 >gi|212710279|ref|ZP_03318407.1| hypothetical protein PROVALCAL_01338 [Providencia alcalifaciens DSM 30120] gi|212687086|gb|EEB46614.1| hypothetical protein PROVALCAL_01338 [Providencia alcalifaciens DSM 30120] Length = 305 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R +S+ ++ V R + D G Sbjct: 1 MELTFLGT--SAGVPT--------------KERNVTSIILNLVGIR--KGYWLFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAAPDCMKHLF 119 ++L I+ + TH H DHI G+ GL P+ +Y +++ Sbjct: 43 QHRILNSPFKTPKIEKIFITHLHGDHIFGLPGLLC-SRSMGGTTDPLTLYGPKGLKQYVE 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + TYP + + IE ++ G + H R+ G+R Sbjct: 102 IVLS---VSDSFMTYP--LEIVEIEAGEL-----FDDGELVVTAYRLDH-RVECYGYRIE 150 >gi|30841332|gb|AAP34379.1| PqqB [Kluyvera intermedia] Length = 307 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 25/170 (14%) Query: 9 ILGCGASLGVPRITGDWGACDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ + C RT+SS+ +S E V+ + PD Sbjct: 5 VLGSAAGGGFPQWNCNCANCSGLRNGSIQAQARTQSSIIVSDNGEDW----VLCNASPDI 60 Query: 65 YMQ------VLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q ++++ VL I +++ T DH G+ LR Q V+ P+ Sbjct: 61 SQQIAHTPELIKKGVLRGTAIGSIILTDSQIDHTTGLLSLREGCPHQ-----VWCTPEVH 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 L F F L + + + + AIPIL Sbjct: 116 GDLTSGFP-IFTMLQH--WNGGLQHHALTPLEPFRVDVCHSLQFTAIPIL 162 >gi|225856892|ref|YP_002738403.1| VicX protein [Streptococcus pneumoniae P1031] gi|225725120|gb|ACO20972.1| VicX protein [Streptococcus pneumoniae P1031] Length = 269 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 83/232 (35%), Gaps = 52/232 (22%) Query: 56 VIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G +L E + +DA+L TH H+DHIHG+ L +K +D+YA Sbjct: 29 LLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGMDLYA 83 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + ++ Y V+ + + + G I+ H Sbjct: 84 NEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGVSHDA 130 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 ++ +RF + TD ++N D +I+A L++G ++ Sbjct: 131 VAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIEANHDVEILRSGSYAWRLKQ 190 Query: 216 ------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 191 RILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|77918933|ref|YP_356748.1| beta-lactamase superfamily hydrolase [Pelobacter carbinolicus DSM 2380] gi|77545016|gb|ABA88578.1| metal-dependent hydrolases of the beta-lactamase superfamily I [Pelobacter carbinolicus DSM 2380] Length = 256 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 52/219 (23%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + + +++D G QV+ + +DA+L TH H DH G+ + ++ + Sbjct: 20 AESRLLIDAGLSAREIGRRLQVIGAEPERLDALLVTHEHRDHCCGLGPVA-----RRWNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + L + + + ++ D IE + Sbjct: 75 PVHVHQATHEAL-------------PGVGKLPSTVTFDSGD-----TFRLRDIEVQTVPI 116 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H ++ GF G + TD+ ++ + L++ D L++G + Sbjct: 117 THDAVAPTGFILSTSAGKIGIVTDLGLATRLVADRFKGCRVLVLESNHDEDLLRDGPYPW 176 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S +E+ + + + + L H+ Sbjct: 177 HLKQRVRSRHGHLSNNEAAQLLRDLHWDGLEAVFLAHLS 215 >gi|295133753|ref|YP_003584429.1| ribonuclease Z [Zunongwangia profunda SM-A87] gi|294981768|gb|ADF52233.1| ribonuclease Z [Zunongwangia profunda SM-A87] Length = 301 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 100/308 (32%), Gaps = 81/308 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P++ +S ++ N ++D G +Q+ + ++ I+ + +H H Sbjct: 8 CYAATPRSLTNPTSQVLTMQ-----NQMFLIDCGEGTQVQLRKNKIKFGKIEHIFISHLH 62 Query: 86 ADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH +G+ GL F L +++ + VY + + + L P + + Sbjct: 63 GDHFYGLIGLISTFMLLNREKELHVYGPKGIKEVILLQLK-----LSKAWTPYPLYFHEL 117 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------NVA--- 182 + ++ +E IP+ R+ + GF F +VA Sbjct: 118 TSTQPEKIYENEKLSVETIPLKH---RVYTNGFLFKEKQGDRKLLVEEARKYKIDVALFK 174 Query: 183 --------------------------------YCTDVNAFPAESLEKLQNLDFL------ 204 +C+D F E + +L N+D L Sbjct: 175 SLKKGKDVISEEGKLIKNELVTESGDAPKSYAFCSDTV-FSEEIIPQLSNIDVLYHESTF 233 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPA 260 + + LK + H + ++ + N K IL H + + + V+ A Sbjct: 234 LQEQLKLTDPTKHSTAMQAATIAKQANVKQLILGHYSTRYPDIKLFKIEAEQVFPNVLLA 293 Query: 261 FDGMQFSS 268 DG Sbjct: 294 EDGKTLEF 301 >gi|226226598|ref|YP_002760704.1| hypothetical protein GAU_1192 [Gemmatimonas aurantiaca T-27] gi|226089789|dbj|BAH38234.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 252 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 80/277 (28%), Gaps = 46/277 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T +G G + P R ++ + + +++D G Sbjct: 1 MKLTTIGTGTAA----------------PHPSRVSAAHLVEA-----GDIRLLLDCGSGA 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK-----RPIDVYAAPDCMKH 117 ++ V I V TH H DHI + L + + P+ +Y Sbjct: 40 VHRMAHLGVAWQDITHVALTHFHTDHIADLPLLIMGWRWGQLPPRSTPVTIYGPVGTGAL 99 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + A+ P+ + + ++ GG +E H S+ + Sbjct: 100 IERM-----AAVHGGWMLAPGFPVTVRDLGSDEIVRLPGG-VELSSHPVPHTP-ESVAYS 152 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSESLKKIELIN 231 + Y D + ++ D L+ + H + + Sbjct: 153 ISEGNRRLVYTGDT-GVSEALGDWSRDCDLLLAECSLPDDMAIGEHLTPRQVGALAARAQ 211 Query: 232 PKNAILTHMHVDLD----YDMVLKSTPSRVVPAFDGM 264 + +LTH + ++ + V + + A DG Sbjct: 212 TRQLVLTHFYPPVEAVDIHAEVAEQYAGPTIVATDGW 248 >gi|291571400|dbj|BAI93672.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 294 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 83/250 (33%), Gaps = 50/250 (20%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V R + +I D G + Q L ++ + +TH H DHI G +F Sbjct: 35 CVEMRVGSQRLIFDGGTGLRVLGQALLAEMPVTAHMFFTHSHWDHIQGF----PFFAPAF 90 Query: 104 RPI---DVYA----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 PI ++Y ++ + D +P P+ + + + G Sbjct: 91 VPINTFNIYGAIAPNGSTIEQ---------RLNDQMLHPNFPVPLQVMGAKLNFIDLTIG 141 Query: 157 GVIE------AIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLD 202 I L H ++G+R AY TD FP L+ +N + Sbjct: 142 ESIYLEDDLVIETALLNHPG-EAVGYRVSWKGYTTAYVTDTEHFPYRLDENVLKLARNAN 200 Query: 203 FLIIDAL-----KNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLK 251 LI DA SS H + E++K + K ++ H D + D + Sbjct: 201 VLIYDATYTDEEYYSPKSSKVGWGHSTWQEAVKVAQAAGVKKLVI--FHHDPLHNDDFMD 258 Query: 252 STPSRVVPAF 261 V AF Sbjct: 259 KIGENVADAF 268 >gi|304439047|ref|ZP_07398966.1| beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372406|gb|EFM25993.1| beta-lactamase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 264 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I +NT +++D G + ++ + +IDA+ TH H DH+ G+ Sbjct: 14 SIFIEE-----NNTRILIDAGHSGKKIESLLKDIDVDPSTIDAIFVTHEHIDHVKGVG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ +DV+A+ F+A++ + I I N + K Sbjct: 67 ---VLHRRYKMDVFASEVT-----------FRAMESQVKKINAENIKIFQNSIGFRYK-- 110 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 + P+ H F TD E ++K+ D ++A Sbjct: 111 --DLYIEPMEIYHDCQEGNSFIIHSKDEKATILTDTGWVNTEMMKKMDGSDIYYLEANHN 168 Query: 209 --------------LKNGLHSSHFSLSESLKKIELI---NPKNAILTHMHVD 243 + + H S + + + + + IL H+ D Sbjct: 169 VDMLINGTYPWQTKQRILSNRGHLSNENAGEILNKLLRKKGERIILAHLSSD 220 >gi|302334895|ref|YP_003800102.1| beta-lactamase domain protein [Olsenella uli DSM 7084] gi|301318735|gb|ADK67222.1| beta-lactamase domain protein [Olsenella uli DSM 7084] Length = 274 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 45/188 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G ++++D G + R + + A+L TH H+DH+ G Sbjct: 22 EGPKGSILIDCGISRRELLRRAGDLGVDMGRVSALLLTHEHSDHVAG------------- 68 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+A + P + + + AG ++ P Sbjct: 69 -IPVFA--------KHFGGTLVATAGTVSGSPRLAGLSFDLVGHSDSFDVAGMHVQCFPT 119 Query: 165 LQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFL-I-----IDA 208 G +GFRF + +CTD AE+L L+++ L I +D Sbjct: 120 SHDVG--DPMGFRFSVTGDDGQAEDALGWCTDSGLLTAEALGLLRDVRILGIESNHDVDL 177 Query: 209 LKNGLHSS 216 L +G + + Sbjct: 178 LAHGPYPA 185 >gi|150390365|ref|YP_001320414.1| hypothetical protein Amet_2603 [Alkaliphilus metalliredigens QYMF] gi|149950227|gb|ABR48755.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 246 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 85/254 (33%), Gaps = 69/254 (27%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T+I++ G F + L + + + L TH H DH I+ L K ID Sbjct: 18 ENKEETLILECGLTFKKIQEGLGYETIKVVGCLVTHEHKDHSKSIEQL------NKNGID 71 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY + M+ L Y KA + K G +P Q Sbjct: 72 VYTSNGTMQALGLKESYRLKA-------------------IKAQEKIRVGGFTILPFDTQ 112 Query: 168 HGRISSLGFRF-----GNVAYCTD---VNAFPAESLEKLQNLDF---------------- 203 H LGF G + + TD K + LD Sbjct: 113 HDAEEPLGFLIQHQDMGKLLFITDSYYCKY-------KFKGLDHIMVECNYKKEILQQNI 165 Query: 204 ---LIIDALKNGLHSSHFSLSESLKKIE---LINPKNAILTHMH-----VDLDYDMVLKS 252 L+++ LKN + SHF L + + L N KN +L H+ +L + + +S Sbjct: 166 EKGLVLECLKNRITKSHFELENVKEFLRSSDLSNTKNIVLIHLSSQNSDKNLFKEEIERS 225 Query: 253 TPSRVVPAFDGMQF 266 T V G++ Sbjct: 226 TGRPVYIGSKGLEI 239 >gi|167769374|ref|ZP_02441427.1| hypothetical protein ANACOL_00700 [Anaerotruncus colihominis DSM 17241] gi|167668342|gb|EDS12472.1| hypothetical protein ANACOL_00700 [Anaerotruncus colihominis DSM 17241] Length = 228 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 ++ AVL TH H DHI G+ L +K I +YA + ++ L D Sbjct: 10 DPRALLAVLVTHEHTDHISGLR-----VLLKKLRIPLYATAEVLERLR----------WD 54 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-----NVAYCTD 186 P +E + G + H + S+G+R VA TD Sbjct: 55 GVIAPDQEAFTVEAGR-----PFSVGSLVIDGFDTPHDSVHSVGYRVQTPDGRRVAVATD 109 Query: 187 VNAFPAESLEKLQNLDFLIID 207 + L D ++I+ Sbjct: 110 MGYISDGVASVLTGCDLVMIE 130 >gi|315428153|dbj|BAJ49738.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 262 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 98/289 (33%), Gaps = 67/289 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 TILG G+ I P +R S + I T +++D GP Sbjct: 3 RITILGAGS------IA----------PSEKRFGSGVFIEA-----EETRLLIDPGPGTI 41 Query: 66 MQVLREQVLSID--AVLYTHPHADHIHGIDGLR-GYFLK-------QKRPIDVYAAPDCM 115 +++R V + AVL +H H DHI + L + Q + + + Sbjct: 42 YKLIRLAVNPLSLTAVLISHFHLDHISDLLPLIMMWCYDEEGKPSSQPKNLHLIGPSGLH 101 Query: 116 KHLFE-----SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 K + + +F Y K + R + I + V G + +H Sbjct: 102 KLVEQVISIDAFSYLNKPMQVRRFLQIDEMRHGDMRQV--------GECKITAAEVEH-- 151 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLH----SSHFSLS 221 ++ L ++ N+ Y D P + L E +N D LI + H H S Sbjct: 152 LNGLAYKITHRGKNIVYSGDT--VPDQHLIELAKNCDLLIHECS--FPHQQLIGKHTSEK 207 Query: 222 ESLKKIELINPKNAILTHMH-------VDLDYDMVLKST-PSRVVPAFD 262 + + NP+ +TH++ ++ + P + A D Sbjct: 208 QLAEIAAKTNPRKIAVTHLYPTWSGREHEITEALKQAGIPPENITVAED 256 >gi|55821167|ref|YP_139609.1| hypothetical protein stu1158 [Streptococcus thermophilus LMG 18311] gi|55737152|gb|AAV60794.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 276 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 74/236 (31%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 32 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + G I+ Sbjct: 87 DIYANEKTW-QIMDSKNMLGKVDNSQK------------HIFSRGKLLTFGDIDIESFGV 133 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I+ +RF + TD ++N D +LI I+ L+ G + Sbjct: 134 SHDAINPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRAGSYPW 193 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L Y + Sbjct: 194 STKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMENQL 249 >gi|15608479|ref|NP_215855.1| hypothetical protein Rv1339 [Mycobacterium tuberculosis H37Rv] gi|15840794|ref|NP_335831.1| hypothetical protein MT1380 [Mycobacterium tuberculosis CDC1551] gi|31792535|ref|NP_855028.1| hypothetical protein Mb1374 [Mycobacterium bovis AF2122/97] gi|121637270|ref|YP_977493.1| hypothetical protein BCG_1401 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661128|ref|YP_001282651.1| hypothetical protein MRA_1347 [Mycobacterium tuberculosis H37Ra] gi|148822560|ref|YP_001287314.1| hypothetical protein TBFG_11369 [Mycobacterium tuberculosis F11] gi|215410984|ref|ZP_03419792.1| hypothetical protein Mtub9_06553 [Mycobacterium tuberculosis 94_M4241A] gi|215426668|ref|ZP_03424587.1| hypothetical protein MtubT9_09843 [Mycobacterium tuberculosis T92] gi|219557242|ref|ZP_03536318.1| hypothetical protein MtubT1_08017 [Mycobacterium tuberculosis T17] gi|224989744|ref|YP_002644431.1| hypothetical protein JTY_1375 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799613|ref|YP_003032614.1| hypothetical protein TBMG_02639 [Mycobacterium tuberculosis KZN 1435] gi|254550351|ref|ZP_05140798.1| hypothetical protein Mtube_07810 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186278|ref|ZP_05763752.1| hypothetical protein MtubCP_09652 [Mycobacterium tuberculosis CPHL_A] gi|260204600|ref|ZP_05772091.1| hypothetical protein MtubK8_09886 [Mycobacterium tuberculosis K85] gi|289442781|ref|ZP_06432525.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289446934|ref|ZP_06436678.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289554869|ref|ZP_06444079.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289569352|ref|ZP_06449579.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289574005|ref|ZP_06454232.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289745091|ref|ZP_06504469.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289749895|ref|ZP_06509273.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289753421|ref|ZP_06512799.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289757444|ref|ZP_06516822.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|294994897|ref|ZP_06800588.1| hypothetical protein Mtub2_10398 [Mycobacterium tuberculosis 210] gi|297633892|ref|ZP_06951672.1| hypothetical protein MtubK4_07210 [Mycobacterium tuberculosis KZN 4207] gi|297730880|ref|ZP_06959998.1| hypothetical protein MtubKR_07305 [Mycobacterium tuberculosis KZN R506] gi|298524846|ref|ZP_07012255.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306775518|ref|ZP_07413855.1| hypothetical protein TMAG_03486 [Mycobacterium tuberculosis SUMu001] gi|306788430|ref|ZP_07426752.1| hypothetical protein TMDG_01222 [Mycobacterium tuberculosis SUMu004] gi|306792759|ref|ZP_07431061.1| hypothetical protein TMEG_01241 [Mycobacterium tuberculosis SUMu005] gi|306797163|ref|ZP_07435465.1| hypothetical protein TMFG_02534 [Mycobacterium tuberculosis SUMu006] gi|306803042|ref|ZP_07439710.1| hypothetical protein TMHG_00526 [Mycobacterium tuberculosis SUMu008] gi|306807236|ref|ZP_07443904.1| hypothetical protein TMGG_01906 [Mycobacterium tuberculosis SUMu007] gi|306971626|ref|ZP_07484287.1| hypothetical protein TMJG_03727 [Mycobacterium tuberculosis SUMu010] gi|307079338|ref|ZP_07488508.1| hypothetical protein TMKG_01842 [Mycobacterium tuberculosis SUMu011] gi|307083903|ref|ZP_07493016.1| hypothetical protein TMLG_03431 [Mycobacterium tuberculosis SUMu012] gi|308369771|ref|ZP_07419005.2| hypothetical protein TMBG_01170 [Mycobacterium tuberculosis SUMu002] gi|308370692|ref|ZP_07422391.2| hypothetical protein TMCG_00974 [Mycobacterium tuberculosis SUMu003] gi|308377695|ref|ZP_07480094.2| hypothetical protein TMIG_03019 [Mycobacterium tuberculosis SUMu009] gi|313658213|ref|ZP_07815093.1| hypothetical protein MtubKV_07325 [Mycobacterium tuberculosis KZN V2475] gi|54040091|sp|P66874|Y1374_MYCBO RecName: Full=Uncharacterized protein Mb1374 gi|54042603|sp|P66873|Y1339_MYCTU RecName: Full=Uncharacterized protein Rv1339/MT1380 gi|1419042|emb|CAA99972.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13880989|gb|AAK45645.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|31618124|emb|CAD94235.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121492917|emb|CAL71388.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148505280|gb|ABQ73089.1| hypothetical protein MRA_1347 [Mycobacterium tuberculosis H37Ra] gi|148721087|gb|ABR05712.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224772857|dbj|BAH25663.1| hypothetical protein JTY_1375 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321116|gb|ACT25719.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289415700|gb|EFD12940.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289419892|gb|EFD17093.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289439501|gb|EFD21994.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289538436|gb|EFD43014.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289543106|gb|EFD46754.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289685619|gb|EFD53107.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289690482|gb|EFD57911.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289694008|gb|EFD61437.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289713008|gb|EFD77020.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298494640|gb|EFI29934.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308215990|gb|EFO75389.1| hypothetical protein TMAG_03486 [Mycobacterium tuberculosis SUMu001] gi|308326497|gb|EFP15348.1| hypothetical protein TMBG_01170 [Mycobacterium tuberculosis SUMu002] gi|308331138|gb|EFP19989.1| hypothetical protein TMCG_00974 [Mycobacterium tuberculosis SUMu003] gi|308334979|gb|EFP23830.1| hypothetical protein TMDG_01222 [Mycobacterium tuberculosis SUMu004] gi|308338785|gb|EFP27636.1| hypothetical protein TMEG_01241 [Mycobacterium tuberculosis SUMu005] gi|308342426|gb|EFP31277.1| hypothetical protein TMFG_02534 [Mycobacterium tuberculosis SUMu006] gi|308346337|gb|EFP35188.1| hypothetical protein TMGG_01906 [Mycobacterium tuberculosis SUMu007] gi|308350260|gb|EFP39111.1| hypothetical protein TMHG_00526 [Mycobacterium tuberculosis SUMu008] gi|308354909|gb|EFP43760.1| hypothetical protein TMIG_03019 [Mycobacterium tuberculosis SUMu009] gi|308358853|gb|EFP47704.1| hypothetical protein TMJG_03727 [Mycobacterium tuberculosis SUMu010] gi|308362790|gb|EFP51641.1| hypothetical protein TMKG_01842 [Mycobacterium tuberculosis SUMu011] gi|308366437|gb|EFP55288.1| hypothetical protein TMLG_03431 [Mycobacterium tuberculosis SUMu012] gi|323720156|gb|EGB29259.1| hypothetical protein TMMG_02040 [Mycobacterium tuberculosis CDC1551A] gi|326902962|gb|EGE49895.1| hypothetical protein TBPG_00819 [Mycobacterium tuberculosis W-148] gi|328459359|gb|AEB04782.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 273 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 46/250 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S + R +++D G Sbjct: 19 RITVLGCSGS----VVGPDSPA-------------SGYLLRAPHTPP---LVIDFGGGVL 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAAPDCMKHLFES 121 + R + VL +H HADH + GL + +Y D L Sbjct: 59 GALQRHADPASVHVLLSHLHADHCLDLPGLFVWRRYHPSRPSGKALLYGPSDTWSRL--- 115 Query: 122 FRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y ++ + + + G + +P L H S G R Sbjct: 116 ------GAASSPYGGEIDDCSDIFDVHHWADSEPVTLGALTIVPRLVAHPT-ESFGLRIT 168 Query: 180 N-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELI 230 + +AY D + +E + +D + +A H S +E+ Sbjct: 169 DPSGASLAYSGDT-GICDQLVELARGVDVFLCEASWTHSPKHPPDLHLSGTEAGMVAAQA 227 Query: 231 NPKNAILTHM 240 + +LTH+ Sbjct: 228 GVRELLLTHI 237 >gi|330894758|gb|EGH27419.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. mori str. 301020] Length = 252 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAANQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G + + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQVGALGIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFNDGKRRFGLLTDLGSYCPNVLQRYQGLDALMIEANHCRDMLARGHYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|323704746|ref|ZP_08116323.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535672|gb|EGB25446.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 270 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 73/238 (30%), Gaps = 55/238 (23%) Query: 53 NTTVIVDTG---PDFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++VD G +L SI A+L TH H DHI G L ++ I Sbjct: 32 DVHILVDAGLSGSTIEKSLLNIDVNPHSISAILITHEHNDHIKG-----AGILSRRYDIP 86 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA + ++ + P G ++ P + Sbjct: 87 IYANEATWSSM-------------ESFIGDIEPH--NKRFFKTGEDFTLGDVKIRPFKKS 131 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS-- 215 H +GF F TD+ + + D +++ D L NG + Sbjct: 132 HDASEPVGFSFFCGQNKATIATDLGYISRGVAANIMDSDVVLLESNHDVDMLMNGTYPWP 191 Query: 216 ---------SHFSLSESLKKIE---LINP-KNAILTHMHV-----DLDYDMVLKSTPS 255 H S ++ + I+ + L H+ ++ Y V+ + Sbjct: 192 LKKRILSPHGHLSNKDAAEAIKKFIKLKAIGKIYLGHLSQNNNKPEIAYKTVVDALKE 249 >gi|268324703|emb|CBH38291.1| conserved hypothetical protein, metallo-beta-lactamase superfamily [uncultured archaeon] Length = 265 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 84/234 (35%), Gaps = 31/234 (13%) Query: 53 NTTVIVDTGP----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T +++D GP F + + A++ TH H DH + ++ + + Sbjct: 37 GTNILIDPGPGTLVRFASSKPKLNPAKLHAIVLTHKHLDHSNDVNVMIEAMTRGG----- 91 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + ++ A+ Y ++ I + + G ++ P H Sbjct: 92 FKHRGVLLCPNDALTDEGDAIVLNHYKGLLERIEVLKEGGTYTV---GEIMINTPKRHVH 148 Query: 169 GRISSLGFRFG-------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFS 219 G + + G G V++ D F LE L+++ S H Sbjct: 149 G-VETYGLNIGLKEEEETKVSFIADTRYF--NGLENYYGGKALVLNVAMYQRRESVDHLC 205 Query: 220 LSESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPS----RVVPAFDGMQF 266 + ++ K I++ P+ AILTH + + + K V+ A DGM+F Sbjct: 206 VEDAKKIIDVKRPRVAILTHFGMTMLRNKPWAIAKQLSEETGVEVIAARDGMRF 259 >gi|220934023|ref|YP_002512922.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. HL-EbGR7] gi|219995333|gb|ACL71935.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. HL-EbGR7] Length = 255 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 24/182 (13%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 R+S + +++D G + +++ I V THPH DH+ + L Sbjct: 16 RRTSAL-------RVDDDILLDCGTGVGD-LSPDELSRIRHVFLTHPHMDHVACLPMLVD 67 Query: 98 --YFLKQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMK 153 + + P+ VYA P C++ L + F D P + V+ V Sbjct: 68 TLFAQLKDAPLMVYATPPCIEILQ---AHIFNWQIWPDFQTLPAPDSPVVRFRPVEWGET 124 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL---QNLDFLII 206 G + H + + G+R G AY D + + L LD L++ Sbjct: 125 VTLGARRIDVLPAIH-TVPACGYRVEGNGGAFAYTGDCTS-NDSLWKALNAHDRLDLLVV 182 Query: 207 DA 208 + Sbjct: 183 EC 184 >gi|331266320|ref|YP_004325950.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326682992|emb|CBZ00609.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 269 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|14590979|ref|NP_143054.1| ribonuclease Z [Pyrococcus horikoshii OT3] gi|41017522|sp|O58883|RNZ_PYRHO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|3257568|dbj|BAA30251.1| 307aa long hypothetical sulfatase [Pyrococcus horikoshii OT3] Length = 307 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 54/179 (30%), Gaps = 36/179 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G P R S+ I E ++ D G Sbjct: 2 IEVIFLGTGGIKPTPE----------------RNVPSIAIKIGGEI-----ILFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ ++ I V TH H DH G+ L K+K P+ +Y L Sbjct: 41 LRQMEIARISPMKIKRVFITHFHGDHYLGLPALIQTMSLWKRKDPLHIYGPEGSSTFLQN 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L+ + P + I +++ + E HG + +LG+ F Sbjct: 101 -------LLNSGYFAPSFD---ILVHEISGKSRLKFKEYEVWAFEVSHG-VPALGYVFK 148 >gi|293189258|ref|ZP_06607981.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces odontolyticus F0309] gi|292821721|gb|EFF80657.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Actinomyces odontolyticus F0309] Length = 265 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 64/218 (29%), Gaps = 37/218 (16%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKHLFESFRYCFKA 128 +DA+ +H HADH+ I L+ ++ P + +Y + M+ + + A Sbjct: 61 ELDALALSHCHADHMGDIISLQ--VYRKWGPGAAASALPLYGPAETMRRVRQ----IEDA 114 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------- 179 D Y + + G + P H + + G R Sbjct: 115 PDGEAYEA-----EFVFTHMQLGEAYQVGPMTIRPYRALH-PVEAFGLRIEGPSEDDPER 168 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKN 234 ++ Y D +E + +D L+ + H + + Sbjct: 169 LVSLFYTGDT-DLCDTIIEGARGVDVLLSEVGFTSDVTEPDMHMDGVRAGEVATRAGVGR 227 Query: 235 AILTHMHVDLDYDMVLKSTPSRVV----PAFDGMQFSS 268 I TH+ D V A GMQ S Sbjct: 228 MIATHIQPWTPRDRVASEVRQTWSGPLDFATSGMQVSL 265 >gi|307706666|ref|ZP_07643472.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307709235|ref|ZP_07645694.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|322376759|ref|ZP_08051252.1| VicX protein [Streptococcus sp. M334] gi|307617910|gb|EFN97071.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307620181|gb|EFN99298.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|321282566|gb|EFX59573.1| VicX protein [Streptococcus sp. M334] Length = 269 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKLLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|284163348|ref|YP_003401627.1| ribonuclease Z [Haloterrigena turkmenica DSM 5511] gi|284013003|gb|ADB58954.1| ribonuclease Z [Haloterrigena turkmenica DSM 5511] Length = 314 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 92/329 (27%), Gaps = 84/329 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG ++ P R S++ ++R E ++ D G Sbjct: 3 LRVTFLGTAGAI----------------PTTERNPSAIFVAREGEE-----LLFDAGEGT 41 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE- 120 Q++R S+ + TH H DH+ GI GL F ++ P+ ++ + L Sbjct: 42 QRQMMRFGTGFSVSHLFVTHLHGDHVLGIPGLLQTMDFNDREEPLAIHTPHGTRRQLKGL 101 Query: 121 --------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------------- 159 SF + D + + +S G + Sbjct: 102 VNALGNRPSFPVRINEVGDGDVAYRADEYEVRAFATDHDARSVGYALVEDDRKGRFDRER 161 Query: 160 ----------------EAIPILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEK 197 E P+ + G + G+ + Y D A ++E Sbjct: 162 AEELGVPVGPKFSKLHEGEPVELEDGTVVEPEQVVGDPRPGRAIVYTGDTRP-AAATVEA 220 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH---------V 242 + + LI DA ++H + ++ + L H+ Sbjct: 221 ADDPELLIHDATFADDRADRARKTAHSTARQAAEIANRAGADQLALMHLSSRYAGQTDAH 280 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 V + V DG P P Sbjct: 281 LEQAREVFAGDETDVFVPDDGQALEIPYP 309 >gi|220930747|ref|YP_002507656.1| beta-lactamase [Clostridium cellulolyticum H10] gi|220001075|gb|ACL77676.1| beta-lactamase domain protein [Clostridium cellulolyticum H10] Length = 263 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + + E+ + A+L +H H DH+ G L +K I Sbjct: 21 EKTKILIDAGLSGKKILEALCSIGEKPEELSAILISHEHVDHVRG-----AGILSRKVDI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIPIL 165 +YA + + P+ +EN + G I P Sbjct: 76 PIYANESTWCAMENG----------------IGPVKLENKVAFSTGEEFEIGDICIRPFA 119 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +GF F + TD+ E L+ + D +++++ LK G + Sbjct: 120 IPHDAAEPVGFNFFADGKRITTATDIGHMSDELLDSIVGNDLVLLESNHDIEMLKVGPYP 179 Query: 216 -----------SHFSLSESLKKIELINPK---NAILTHMHVDLDYDMVLKST 253 H S + K I + K IL H+ + ++ + T Sbjct: 180 WPLKKRILGDHGHLSNENAAKVITYLAEKGCSRFILGHLSSENNFPELAYQT 231 >gi|55823080|ref|YP_141521.1| hypothetical protein str1158 [Streptococcus thermophilus CNRZ1066] gi|55739065|gb|AAV62706.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 276 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 73/236 (30%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 32 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + G I+ Sbjct: 87 DIYANEKTW-QIMDSKNMLGKVDNSQK------------HIFSRGKLLTFGDIDIESFGV 133 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 134 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRAGSYPW 193 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L Y + Sbjct: 194 STKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMENQL 249 >gi|330508826|ref|YP_004385254.1| metallo-beta-lactamase domain-containing protein [Methanosaeta concilii GP-6] gi|328929634|gb|AEB69436.1| metallo-beta-lactamase domain protein [Methanosaeta concilii GP-6] Length = 247 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 49/249 (19%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G +G+P+ R+++++ I +++D G Sbjct: 2 SLKVTLLGTG--VGIPQPG--------------RSQAAILIENDLP------LLLDCGAG 39 Query: 64 --FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFE 120 + + +ID V+ +H H DH+H + L + + ++ + Sbjct: 40 TLLRLDQVGAGPEAIDTVVLSHLHLDHVHDLLALANGRYLSGLQGLSIFGPAGTREW--- 96 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F++L P + + ++ + + H +++L +R Sbjct: 97 -----FESLQAA--YPNLERMESHVQELKAMDSFSIKGFDIFAEEALHS-VTALAYRLEA 148 Query: 181 ----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIELIN 231 + Y D A D LI + H++ L L +L Sbjct: 149 EERVIVYSGDT-EPSARVAALADGSDLLIHECSFPEPFDVTNHTTPLKLGNMLSNHDL-- 205 Query: 232 PKNAILTHM 240 K +LTH+ Sbjct: 206 -KRVVLTHL 213 >gi|89897763|ref|YP_521250.1| hypothetical protein DSY5017 [Desulfitobacterium hafniense Y51] gi|89337211|dbj|BAE86806.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 270 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 52/172 (30%), Gaps = 37/172 (21%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G + L I+ + TH H+DHI G+ + +K I Sbjct: 20 EKRNFLVDCGISLKATLHNLAILDIAPSEIEGIFITHEHSDHIKGVGAVA-----RKLKI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA+ L P I + V AG + P Sbjct: 75 PIYASAKIWDELN---------------PSIGKLKDEQRVVVKDAFTCAGLRVRVFPTS- 118 Query: 167 QHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H S G R + TD E + L+ D L+++A Sbjct: 119 -HDSQESFGVRVEVEQPVKGRSRAIGIATDTGIVTEEMHQALKGCDALVVEA 169 >gi|116627884|ref|YP_820503.1| beta-lactamase superfamily hydrolase [Streptococcus thermophilus LMD-9] gi|116101161|gb|ABJ66307.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus LMD-9] gi|312278465|gb|ADQ63122.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus thermophilus ND03] Length = 270 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 73/236 (30%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 26 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + G I+ Sbjct: 81 DIYANEKTW-QIMDSKNMLGKVDNSQK------------HIFSRGKLLTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 128 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L Y + Sbjct: 188 STKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMENQL 243 >gi|322715361|gb|EFZ06932.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326624132|gb|EGE30477.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 308 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 81/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 2 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 44 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 45 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 104 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 105 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 153 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 154 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 213 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ I+TH Sbjct: 214 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTH 273 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 274 ISSRYDDKGCQRLLAECRAIFPATELAYD 302 >gi|62128516|gb|AAX66219.1| putative metal-dependent hydrolase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 334 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 81/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 28 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 70 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 71 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 130 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 131 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 179 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 180 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 239 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ I+TH Sbjct: 240 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTH 299 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 300 ISSRYDDKGCQRLLAECRAIFPATELAYD 328 >gi|317131697|ref|YP_004091011.1| putative metal dependent hydrolase [Ethanoligenens harbinense YUAN-3] gi|315469676|gb|ADU26280.1| putative metal dependent hydrolase [Ethanoligenens harbinense YUAN-3] Length = 262 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 77/224 (34%), Gaps = 50/224 (22%) Query: 50 RGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G + + + + AV TH H+DHI + L +K Sbjct: 19 EDGDAGVLIDAGVSMRRICAGLLAIGSDISRVRAVFLTHEHSDHIKALP-----MLFKKY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+A P ++ + +NP E + C + G + + Sbjct: 74 EIPVFATPGTIRGACAA-------------VEALNPDRFEQMETGCCAEVGGMAVSS--F 118 Query: 165 LQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H + S+G+R + A TD+ + +Q ++ ID L+NG Sbjct: 119 ATSHDSLESVGYRISFAGGEDAAVATDLGFVDEPVMRGVQGCKMVMLESNHDIDMLRNGR 178 Query: 214 HS-----------SHFSLSE---SLKKIELINPKNAILTHMHVD 243 + H S + L + ++ +L H+ D Sbjct: 179 YPYYLKRRILSAMGHLSNRDCAAVLPALADAGMRHVVLAHLSAD 222 >gi|194289307|ref|YP_002005214.1| hypothetical protein RALTA_A1183 [Cupriavidus taiwanensis LMG 19424] gi|193223142|emb|CAQ69147.1| conserved hypothetical protein; putative Metal-dependent hydrolase [Cupriavidus taiwanensis LMG 19424] Length = 262 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 67/216 (31%), Gaps = 60/216 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G S G +SL I E + T V++D G Sbjct: 2 MRFAFLGSG-SEG----------------------NSLLIES-REDTTTTRVLLDCGFGI 37 Query: 65 YM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 ++ R V +DAVL TH H DH+ Y + + VY + Sbjct: 38 RETARRLERLGVTPDQLDAVLVTHEHGDHVG-----SAYAFAARHRLTVYTSHGT----- 87 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPIC---MKSAGGVIEAIPILQQHGRISSLGF 176 + + + DV +C A G ++ +P H + F Sbjct: 88 --------------WLATSHLRGADVADVRVCCADHGFAIGGLQVLPYTVPHDAREPVQF 133 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD +L +D L+++ Sbjct: 134 VLSDGQARLGVLTDAGMETPYVTARLAGVDALVLEC 169 >gi|209546335|ref|YP_002278225.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539192|gb|ACI59125.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 276 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R +I D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGEHRMIFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D P + IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHPGQALTPHEGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 + H ++G+R +VA D+ P SLE +++ D ++ D Sbjct: 150 IKTFMLNHPG-GAIGYRIEWQGRSVALIYDIEHIPGSYDPVSLEMMRDADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKIAGAKRFALFH 241 >gi|282599833|ref|ZP_05972082.2| metal-dependent Hydrolase of the beta-lactamase superfamily III [Providencia rustigianii DSM 4541] gi|282567343|gb|EFB72878.1| metal-dependent Hydrolase of the beta-lactamase superfamily III [Providencia rustigianii DSM 4541] Length = 251 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 39/227 (17%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + T++G G + D RT +S+ + + ++VD Sbjct: 3 MLPNFQVTVVGAGDAY-------DCE----------RTNASILVEESGFK-----LLVDC 40 Query: 61 GPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKH 117 GP ++ + Q +DA+ TH H DH G+ L + ++KRP+ + A + Sbjct: 41 GPTVPQKMFKMHQADELDAIYITHCHPDHCLGLTSLLNWMDSYRRKRPLTIIAQQAQWEI 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----RISS 173 L + P + +I I + G +A QH + Sbjct: 101 LAPLLHFA------HWPKPQLGFEIIRKYSEEIQ---SIGSWKATTSPTQHSVSNLSLHL 151 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 + Y D + + D++ ++ H SH S Sbjct: 152 TSGSGHRLFYSGD-GEISLQGEQLALQSDWVFLECETLNSHPSHGSW 197 >gi|163790942|ref|ZP_02185365.1| metallo-beta-lactamase YycJ [Carnobacterium sp. AT7] gi|159873784|gb|EDP67865.1| metallo-beta-lactamase YycJ [Carnobacterium sp. AT7] Length = 270 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 70/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG-PDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD+G + L V +D +L TH H DH+HG+ L +K Sbjct: 26 ESKEKKLLVDSGLSGKRVTELLKKIDRNVADLDGILVTHEHRDHVHGVG-----VLARKY 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIP 163 +DVYA + PI+ I E + G I+ Sbjct: 81 NLDVYANEQTWAAM----------------SPIIGTIKTEQKYLFEMGKTMTIGDIDIES 124 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGL 213 H I+ + F TD + N D +L ++ L+ G Sbjct: 125 FGVSHDAIAPQFYSFHKDNKKFVMLTDTGYVSDRMRGIVSNADAYLFESNHDLEMLRMGN 184 Query: 214 HSSHF------------SLSESLKKIELIN--PKNAILTHMHVD 243 + H + +L E+I K L H+ D Sbjct: 185 YPWHLKQRILGDKGHLSNEDGALALSEIIGDATKRVYLGHLSKD 228 >gi|256832124|ref|YP_003160851.1| hypothetical protein Jden_0886 [Jonesia denitrificans DSM 20603] gi|256685655|gb|ACV08548.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603] Length = 267 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 19/218 (8%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + E G +V++D G + R ++AV +H H DH + G Y Sbjct: 20 SSYLVQADDEDGKQWSVVLDLGSGALGALQRHVNPFDVNAVFLSHLHPDHCADMAGYYVY 79 Query: 99 FLK---------QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP--IVNPIVIENND 147 + Q P+ VY D + L + D + + + IE Sbjct: 80 YRYHPSYGTEKSQCTPVTVYGPRDTQERLGCMYGLDEGENMDGQFVHNTLSDGDRIEVGP 139 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL--- 204 + I ++S +EA + S R +AY D + N+D Sbjct: 140 LTIDVRSVRHPVEAFGFRIEGPSEHSPADRV-TLAYTGDT-DICDSLDDLAANVDLFLSE 197 Query: 205 --IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 I+ + + H + +++ E ++ +LTH+ Sbjct: 198 AAFIEGRDDAIEGLHLTGAKAGHIAERAGARSLVLTHI 235 >gi|220923163|ref|YP_002498465.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219947770|gb|ACL58162.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 323 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 83/248 (33%), Gaps = 37/248 (14%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYT 82 DP + +++ S + + ++ D G ++ + + S+ V T Sbjct: 22 CYDSDPARDRITKSQPSRFSAATLVQAGGLNLLFDAGRGCAIRLRQIGVPLGSVAPVFLT 81 Query: 83 HPHADHIHGIDGLRGYFLKQ------KRPIDVYAAPDCMKHLFESFRYCF-----KALDD 131 H H+DH G+ L Q + P+ + KH+ E+ R F + D Sbjct: 82 HFHSDHTVGLPDLWMTGYIQTSYAMRRAPMVLIGPVGT-KHMAENMRAAFIDDIRIRMAD 140 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRFGNVA----YCT 185 P I I + + + A G ++ HG + + G+R + Sbjct: 141 EKTPEIATQIDARDFNSDDVVFEANG-VKVTAFAVNHGPLIHPAYGYRVDHAGHSVLISG 199 Query: 186 DVNAFPAESLEKLQNLDFL----------IIDALKNG---LHSSHFSLSESLKKIELINP 232 D F + D L ++D L+N H H S E+ P Sbjct: 200 DTK-FDEAVIRHGTGADLLVHEVCDAPSDVLDKLQNRAIMEH--HTSPEEAGTVFSRAKP 256 Query: 233 KNAILTHM 240 K A TH+ Sbjct: 257 KLAAYTHI 264 >gi|57866978|ref|YP_188643.1| AtsA/ElaC family protein [Staphylococcus epidermidis RP62A] gi|293366536|ref|ZP_06613213.1| ribonuclease Z [Staphylococcus epidermidis M23864:W2(grey)] gi|76363382|sp|Q5HP47|RNZ_STAEQ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|57637636|gb|AAW54424.1| AtsA/ElaC family protein [Staphylococcus epidermidis RP62A] gi|291319305|gb|EFE59674.1| ribonuclease Z [Staphylococcus epidermidis M23864:W2(grey)] gi|329735312|gb|EGG71604.1| ribonuclease Z [Staphylococcus epidermidis VCU045] Length = 306 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 99/310 (31%), Gaps = 96/310 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + ID + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + YP I ++ + + HG I S G+R Sbjct: 103 TSLQ---LSESHLNYP-------ITYIEINQQLAYHHNGFTVQAEMLNHG-IPSFGYRIE 151 Query: 180 ------------------------------------NVAYCTD----------VNAFPAE 193 + Y +D + + + Sbjct: 152 APITPGTINVEALRGIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 194 S------LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + E +N D +I +A L N H SH + + I+ N +++TH Sbjct: 212 TKPCENEYELAKNSDLMIHEATYIEGDKKLANNYHHSH--IDDVFNLIKQANVNKSLITH 269 Query: 240 MHVDLDYDMV 249 + + D V Sbjct: 270 ISNRYNIDEV 279 >gi|33598687|ref|NP_886330.1| metallo-beta-lactamase family protein [Bordetella parapertussis 12822] gi|33603641|ref|NP_891201.1| metallo-beta-lactamase family protein [Bordetella bronchiseptica RB50] gi|33574817|emb|CAE39478.1| metallo-beta-lactamase family protein [Bordetella parapertussis] gi|33577766|emb|CAE35031.1| metallo-beta-lactamase family protein [Bordetella bronchiseptica RB50] Length = 294 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 99/316 (31%), Gaps = 77/316 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LG G P RR S + RV + ++ D G Sbjct: 1 MNLWLLGTGTPT----------------PSLRRM-CSGYLVRVGDE----YLVFDHGFGA 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR-----PIDVYAAPDCMKH 117 + ++L V + ++H H DH+ L + +DVY P +K Sbjct: 40 HHRMLELGVRATQVSHAFFSHHHYDHMGDYPRLL-LTRWDQGVGRVDDMDVYGPPP-LKL 97 Query: 118 LFES-------FR---------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + E F Y + P + + V +++ Sbjct: 98 ITERLIGDDGAFGPDLISRTENQCSIDVYQARGGTGMRARPQPRLHELAADAV---VRTP 154 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI----- 205 G + P+ + S G+R + Y D P+ +L +L Q+ D L+ Sbjct: 155 GWTVRVAPVNHFAPHLVSYGYRLDADGQSFVYSGDTG--PSRALRELAQDCDVLVHMCHY 212 Query: 206 IDALKNGLHSSHFSLS--ESLKKIELINPKNAILTHMHVDLDY--------DMVLKSTPS 255 + + F++ E + N +N +++H+ D+ V + Sbjct: 213 VSGTAPSKTFAAFTMGHRELAELAAEANVRNLVISHVTEQFDHPGMRERIVREVGEIYRG 272 Query: 256 RVVPAFDGMQFSSPIP 271 + DGM+ P Sbjct: 273 NIFFGEDGMEIPFAGP 288 >gi|27468105|ref|NP_764742.1| hypothetical protein SE1187 [Staphylococcus epidermidis ATCC 12228] gi|251810920|ref|ZP_04825393.1| ribonuclease Z [Staphylococcus epidermidis BCM-HMP0060] gi|282876071|ref|ZP_06284938.1| ribonuclease Z [Staphylococcus epidermidis SK135] gi|41017554|sp|Q8CSG7|RNZ_STAES RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|27315651|gb|AAO04786.1|AE016748_20 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|251805600|gb|EES58257.1| ribonuclease Z [Staphylococcus epidermidis BCM-HMP0060] gi|281295096|gb|EFA87623.1| ribonuclease Z [Staphylococcus epidermidis SK135] gi|329737307|gb|EGG73561.1| ribonuclease Z [Staphylococcus epidermidis VCU028] Length = 306 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 99/310 (31%), Gaps = 96/310 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + ID + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + YP I ++ + + HG I S G+R Sbjct: 103 TSLQ---LSESHLNYP-------ITYIEINQQLAYHHNGFTVQAEMLNHG-IPSFGYRIE 151 Query: 180 ------------------------------------NVAYCTD----------VNAFPAE 193 + Y +D + + + Sbjct: 152 APIMPGTINVEALRGIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 194 S------LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + E +N D +I +A L N H SH + + I+ N +++TH Sbjct: 212 TKPCENEYELAKNSDLMIHEATYIEGDKKLANNYHHSH--IDDVFNLIKQANVNKSLITH 269 Query: 240 MHVDLDYDMV 249 + + D V Sbjct: 270 ISNRYNIDEV 279 >gi|300864020|ref|ZP_07108924.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] gi|300337972|emb|CBN54070.1| beta-lactamase-like [Oscillatoria sp. PCC 6506] Length = 302 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 54/258 (20%), Positives = 89/258 (34%), Gaps = 48/258 (18%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V R + +I D G + +LR+ + + +TH H DHI G F+ Sbjct: 54 SCVEMRLGDKRLIFDGGTGLRVLGISLLRQMPVEAH-MFFTHTHWDHIQGFPFFVPAFVP 112 Query: 102 QKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +Y A + + D +P PI + +D+ + G +IE Sbjct: 113 -KNCFHIYGAIAPNGSTIKQRLS------DQMLHPNFPVPIQVMASDLKFYDITPGDIIE 165 Query: 161 -----AIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIID 207 L H +++G+R YCTD +P L +N D LI D Sbjct: 166 LDDIKIETALLNHPN-TAVGYRVTWQGHTAVYCTDTEHYPDRLDENVLHLARNADVLIYD 224 Query: 208 ALK----------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM-----VLKS 252 A + H + ++ + K ++ H D +D V +S Sbjct: 225 ATYTNAEYHDFKSPKIGWGHSTWEVGVEVAKAAGVKRIVM--FHHDPSHDDNFLDSVEES 282 Query: 253 T----PSRVVPAFDGMQF 266 P+ A +GM Sbjct: 283 LQSVFPNG-FLAREGMTV 299 >gi|255283217|ref|ZP_05347772.1| ribonuclease Z [Bryantella formatexigens DSM 14469] gi|255266290|gb|EET59495.1| ribonuclease Z [Bryantella formatexigens DSM 14469] Length = 303 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 57/304 (18%), Positives = 96/304 (31%), Gaps = 77/304 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG + +P R +SL + + +++++D G + Sbjct: 6 LLGCGGMMPLP----------------YRWLTSLMVRY-----NGSSLLIDCGEGTQI-A 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAA---PDCMKHLFE 120 +RE+ ID + +TH H DHI G+ G L ++ P+ + + L Sbjct: 44 IREKGWSFKPIDVICFTHYHGDHISGLPGLLLSMGNAERTEPLTLIGPRGLERVVNALRV 103 Query: 121 S-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 F FK + V + V + G +E Sbjct: 104 IAPELPFPLIFKEIQSAEESFEVLGCRVTAYRVNHNVLCYGYCVEVDRAGKFDVERAKAQ 163 Query: 162 -IPI-----------LQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEK-LQNLD 202 IP+ L + GR + G VAYCTD P +S+ + D Sbjct: 164 EIPMKFWNRLQKGETLTEDGRTYTPDMVLGKSRKGLKVAYCTDTR--PTKSIVRNAAGAD 221 Query: 203 FLIIDALKNGLHS-------SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 I + + H + E+ + K LTH L T Sbjct: 222 LFICEGMYGEPGKEQKAQEYKHMTFKEAANLAKEAKVKEMWLTHYSPSLARPEEYLETAR 281 Query: 256 RVVP 259 ++ P Sbjct: 282 KIFP 285 >gi|308272442|emb|CBX29046.1| hypothetical protein N47_J00270 [uncultured Desulfobacterium sp.] Length = 270 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 80/230 (34%), Gaps = 56/230 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS T+V++D G + M+ ++DA++ +H H+DHI G+ Sbjct: 29 SIYIS-----DGQTSVLIDAGLSGVEIERRMKANNLVPNNLDAIIVSHEHSDHISGVG-- 81 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ I VY + K ++ ++ I + Sbjct: 82 ---VLSRRFAIPVYISSKTQKA-------------ASSFLGRIDEFKIFECGTGFNING- 124 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 I P H + GF + TD+ E L+ LI++A Sbjct: 125 ---INFHPFSLSHDARDTAGFTVTKNKTKIGIATDLGIVTTMVKEHLKMCSILILEANHD 181 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 L NG + H S +S ++ I N ++ IL+H+ Sbjct: 182 PYMLANGPYPWPLKQRIKSRSGHLSNQDSKVLLQEIVHDNLEHVILSHLS 231 >gi|169806724|ref|XP_001828106.1| ribonuclease Z [Enterocytozoon bieneusi H348] gi|161779234|gb|EDQ31258.1| ribonuclease Z [Enterocytozoon bieneusi H348] Length = 531 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 60/272 (22%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G ++ P+ KN ++ + +N ++ D G D Sbjct: 298 LLFLGTGCAI-------------PSKEKN--------VASLLYFNNNYGILFDCGEDTIG 336 Query: 67 QVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF-E 120 Q+ R + I + +H H DH+ GI + I + + +L Sbjct: 337 QIKRIYSNISILNQIYIIFISHSHPDHMLGI---VAILKSSQHCITIIGSTILDNYLQIF 393 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + +Y F + Y VI+N I I GF+ Sbjct: 394 NVKYKFVNVSTNNY------FVIDNIKFTIAKSEHFKDSVFCAIDHN-------GFK--- 437 Query: 181 VAYCTDVNAFPAESLE--KLQNLDFLI-----IDALKNGLHSS-HFSLSESLKKIELINP 232 ++Y D P+ + L N D +I +D+ K+ + H + +E+ + + Sbjct: 438 LSYSGDCR--PSMTFANISLYN-DVMIHECTFLDSQKDFALKTKHSTNTEAYEIFKASKS 494 Query: 233 KNAILTHMH--VDLDYDMVLKSTPSRVVPAFD 262 K ILTH LD + + V+ A D Sbjct: 495 KKLILTHFSQRNKLDMW-INEVLDDNVLLAHD 525 >gi|126663926|ref|ZP_01734921.1| ribonuclease Z [Flavobacteria bacterium BAL38] gi|126624190|gb|EAZ94883.1| ribonuclease Z [Flavobacteria bacterium BAL38] Length = 301 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 100/308 (32%), Gaps = 81/308 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P+ +S + N ++D G +Q+ + ++ I+ + +H H Sbjct: 8 CYAATPRTITNPTSQVLDI-----KNHLFLIDCGEGTQVQLRKHKIKFSRINHIFISHLH 62 Query: 86 ADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH +G+ GL F L ++ + VY + + R + + Sbjct: 63 GDHFYGLIGLISTFMLLNRENDLHVYGPKGVKEIILLQLR-----ASGSFTGYNLYFHEL 117 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------------------------- 178 E+ + + + +++ IP+ RI + GF F Sbjct: 118 ESKESEVIFEDETVIVKTIPLNH---RIYTNGFLFQEKLGKRHLNIEAVAKYKIEKCYFD 174 Query: 179 -----GNV-----------------------AYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 GNV A+C+D + + + +D L +A Sbjct: 175 KIKSGGNVTLDSGEVIDNELLSLPPDATKSYAFCSDT-MYDESIVPIINEVDVLYHEATF 233 Query: 209 LKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDL----DYDMVLKSTPSRVVPA 260 L + H + H + E+ K +L N K IL H + ++ V A Sbjct: 234 LDSEAHYTEKTKHTTAKEAAKIAKLANVKQLILGHYSTRYGSIEPFKTEAQTIFENVFLA 293 Query: 261 FDGMQFSS 268 DG +F Sbjct: 294 DDGREFEF 301 >gi|111220957|ref|YP_711751.1| hypothetical protein FRAAL1504 [Frankia alni ACN14a] gi|111148489|emb|CAJ60160.1| conserved hypothetical protein [Frankia alni ACN14a] Length = 225 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 34/236 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 +++D G ++ R + IDAVL +H H DH +D + + ++ P Sbjct: 2 ESDGFRLVLDAGNGSMGELQRHCDLRDIDAVLLSHLHGDHC--LDLVANSYARRYHPEGM 59 Query: 106 ---IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY + + L F+ D + I + I G Sbjct: 60 PPKLPVYGPINTQERLCG----AFEKWPDDSLADIYDFRTIGAG------CLHVGPFRID 109 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLH 214 H + + G R + Y D A + ++ D + +A ++ Sbjct: 110 LTRVAH-PVEAYGVRVTAEDRVLTYSGDTGAC-DRLVRLARDSDLFLCEASFLDDEDNPP 167 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG-MQFSSP 269 H + E+ + + +LTH+ + + +S AFDG + ++P Sbjct: 168 DLHLTGREAGEHAQKAGVGRLVLTHL---VPWGNAARSE-EEAAGAFDGNLTIAAP 219 >gi|168207696|ref|ZP_02633701.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|168214936|ref|ZP_02640561.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170660992|gb|EDT13675.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|170713632|gb|EDT25814.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 263 Score = 62.8 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 55/251 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSEKTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H ++S G+ + + TD+ F E L ++ + +++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKYKGKSASIATDIGTFTEEILRNIRESEVILLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVL 250 +K G + H S + K I I + IL H+ + + Sbjct: 169 VQMVKFGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELA 228 Query: 251 KSTPSRVVPAF 261 + V+ A Sbjct: 229 EQAVINVLNAH 239 >gi|227514772|ref|ZP_03944821.1| ribonuclease Z [Lactobacillus fermentum ATCC 14931] gi|227086881|gb|EEI22193.1| ribonuclease Z [Lactobacillus fermentum ATCC 14931] Length = 310 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 83/292 (28%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + ER + + D G Sbjct: 1 MQIEFLGTGAGS----------------PSKQRNVSSLALRLLEERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------P 112 Q+L + ++ + TH H DHI G+ G R + P+ +Y Sbjct: 43 QHQILHTTIRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIYGPKGIKDFVQ 101 Query: 113 DCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQH 168 +K Y F L + + + S G +E A P Sbjct: 102 TALKVSESRLSYPLKFVELTGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMV 161 Query: 169 GRISSLGFRFGN---------------------------------VAYCTDVNAFPAESL 195 ++ G G VA D ++ Sbjct: 162 EKVRQAGIPSGPLYGQLKRGEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDT-RVTDNAV 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + D L+ +A + + H + +++ + + +L H+ Sbjct: 221 KLAKGADVLVHEATFAKNEQRLAHNYYHSTSAQAATVAKKAGAQRLLLNHIS 272 >gi|325571473|ref|ZP_08146973.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325155949|gb|EGC68145.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 268 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + ++VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLYIE-----SNKKRILVDAGLSGKKITSLLDEVGRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I N V + + + Sbjct: 73 ---VLARKYKLDVYANTKTWQAMD---------------PMIGNVAVEQKHIFEMGKVLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H + +RF + TD ++ D +L+ Sbjct: 115 LGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGADAYLVESNHD 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 ++ L+ G + H S + +L +++ N K L H+ + Sbjct: 175 LEMLRMGPYPWSLKQRILGDRGHLSNEDGALVMTDILTDNTKRVYLGHLSKE 226 >gi|206578868|ref|YP_002237337.1| ribonuclease Z [Klebsiella pneumoniae 342] gi|290508470|ref|ZP_06547841.1| ribonuclease Z [Klebsiella sp. 1_1_55] gi|254808641|sp|B5XNW7|RNZ_KLEP3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|206567926|gb|ACI09702.1| ribonuclease Z [Klebsiella pneumoniae 342] gi|289777864|gb|EFD85861.1| ribonuclease Z [Klebsiella sp. 1_1_55] Length = 306 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 55/181 (30%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 T LG S GVP RTR +S+ ++ + + D G Sbjct: 1 MELTFLGT--SAGVP----------------TRTRNMTSIILNLQQPTRAEM-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHL 118 Q L ++ + TH H DH+ G+ GL Q + +Y + + Sbjct: 42 GTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLPLTLYGPKGLKEFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P+ I + G + A P+ + G+R Sbjct: 102 --------ETALRLSGSWTDYPLTIIEVGPGLVFDEEGYRVTAYPLSHP---VECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|325293949|ref|YP_004279813.1| metal dependent beta lactamase protein [Agrobacterium sp. H13-3] gi|325061802|gb|ADY65493.1| metal dependent beta lactamase protein [Agrobacterium sp. H13-3] Length = 286 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 71/212 (33%), Gaps = 21/212 (9%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + R + ++ D G + L E + ++ + ++H H DHI G + + Sbjct: 43 CIEVRCGDHVLLFDAGSGLHPAGLALRAEGITDVN-LFFSHCHYDHIVGFPYFKPF-YNS 100 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIEA 161 + +++ F + P V + D P + + Sbjct: 101 SNDVAIWSGHLAGTMTTREMLKDFMSPPWFPVPLEVCCAKMATRDFMPGDVLDVHPGLSI 160 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNA----FPAESLEKLQNLDFLIIDALKNG- 212 + H +++G+R + A TD L+ ++++D + DA+ Sbjct: 161 RTGMLNHPG-NAIGYRLDWAGKSFAIITDTEHEPGNIDKNVLDLIKDVDLFLYDAMFTDE 219 Query: 213 -----LHSSHFSLSESLKKIELINPKNAILTH 239 H S E+++ +L KN H Sbjct: 220 EMALYRGYGHSSWQEAIRLAKLAGAKNVGFIH 251 >gi|257865292|ref|ZP_05644945.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257874892|ref|ZP_05654545.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257799226|gb|EEV28278.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257809058|gb|EEV37878.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 267 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + ++VD G +L E + +DA+L TH H DHIHG+ Sbjct: 19 SLYIE-----SNKKRILVDAGLSGKKITSLLDEVGRKPEDLDAILVTHEHRDHIHGVG-- 71 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I N V + + + Sbjct: 72 ---VLARKYKLDVYANTKTWQAMD---------------PMIGNVAVEQKHIFEMGKVLT 113 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H + +RF + TD ++ D +L+ Sbjct: 114 LGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGADAYLVESNHD 173 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 ++ L+ G + H S + +L +++ N K L H+ + Sbjct: 174 LEMLRMGPYPWSLKQRILGDRGHLSNEDGALVMTDILTDNTKRVYLGHLSKE 225 >gi|324993991|gb|EGC25910.1| ribonuclease Z [Streptococcus sanguinis SK405] gi|324994690|gb|EGC26603.1| ribonuclease Z [Streptococcus sanguinis SK678] gi|327474856|gb|EGF20261.1| ribonuclease Z [Streptococcus sanguinis SK408] gi|327489981|gb|EGF21770.1| ribonuclease Z [Streptococcus sanguinis SK1058] Length = 309 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 90/296 (30%), Gaps = 79/296 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQN---- 200 +++AG + ++G+ L G + Y + P +++ L + Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGIKIIAADYISAPR--PGKTIAILGDTRKT 220 Query: 201 ---------LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A K + H + ++ + + K +L H+ Sbjct: 221 SASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|270292776|ref|ZP_06198987.1| VicX protein [Streptococcus sp. M143] gi|270278755|gb|EFA24601.1| VicX protein [Streptococcus sp. M143] Length = 269 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKANNIKELAHMTMVNQL 242 >gi|257871620|ref|ZP_05651273.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257805784|gb|EEV34606.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 268 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + ++VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLYIE-----SNKKRILVDAGLSGKKITSLLDEVGRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I N V + + + Sbjct: 73 ---VLARKYKLDVYANTKTWQAMD---------------PMIGNVAVEQKHIFEMGKVLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H + +RF + TD ++ D +L+ Sbjct: 115 LGDLDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGADAYLVESNHD 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 ++ L+ G + H S + +L +++ N K L H+ + Sbjct: 175 LEMLRMGPYPWSLKQRILGDRGHLSNEDGALVMTDILTDNTKRVYLGHLSKE 226 >gi|84495428|ref|ZP_00994547.1| hypothetical protein JNB_11519 [Janibacter sp. HTCC2649] gi|84384921|gb|EAQ00801.1| hypothetical protein JNB_11519 [Janibacter sp. HTCC2649] Length = 263 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 94/273 (34%), Gaps = 47/273 (17%) Query: 18 VPRITGD--WGACDPTNPKNRRTRSSL-KISRVSERGSNTTVIVDTGPDFYMQVLR-EQV 73 V I G W D S + +R +++D G + +LR Sbjct: 18 VTVIGGQGAWPTADAG--------CSGYLVEASGQR-----ILMDPGWATFQGLLRLADP 64 Query: 74 LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 L IDAVL +H H DH + L R P+ VYA + HL + Sbjct: 65 LEIDAVLVSHSHPDHCADLLPLLRSRALSEPAADPLPVYAPAGALDHLL-------ASDA 117 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD 186 + V+ + K G +A H +++LG R +V+Y D Sbjct: 118 VGAVQRAADLRVVSDGS-----KVRMGEFDAAFAELPH-HVTNLGVRLSAEGTSVSYTGD 171 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSSH-----FSLSESLKKIELINPKNAILTHMH 241 A +E + D I +A + L+ ++++ + +LTH+ Sbjct: 172 -GGPDAAVVELAADADLHIAEATFAEPITGEDAGLLTDLATAVEQGAAAGARQVLLTHLW 230 Query: 242 VDLDYDMVLKSTPSR----VVPAFDGMQFSSPI 270 YD +++ V A GM + +P Sbjct: 231 PGASYDEIVQERYGHSSPLVAVARAGMTWQAPA 263 >gi|325291404|ref|YP_004267585.1| hypothetical protein Sgly_3321 [Syntrophobotulus glycolicus DSM 8271] gi|324966805|gb|ADY57584.1| hypothetical protein Sgly_3321 [Syntrophobotulus glycolicus DSM 8271] Length = 262 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 70/223 (31%), Gaps = 57/223 (25%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQK 103 G + ++D G + + + ++D ++ TH H DH+ GI K Sbjct: 19 GQEGSFLIDCGIAMKN--ILKNLSTLDIEPAGLKGIIVTHEHTDHVKGIG---PLARKLG 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +YA + S V M AG + Sbjct: 74 --IPIYATAGLWAEMNGSIGKIGSEQRVV---------------VEREMMLAGMQVNL-- 114 Query: 164 ILQQHGRISSLGFRF--GNVA--YCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H S G + G +A TD + LQ D I ++AL NG Sbjct: 115 FETSHDSRESYGIKIREGRLALGIATDSGTVTEDMDAHLQGCDAFIVEANHDVEALWNGR 174 Query: 214 HS-----------SHFS---LSESLK-KIELINPKNAILTHMH 241 + H S LSE+L IE N K +L H+ Sbjct: 175 YPWSLKKRVNSNYGHLSNNQLSEALAKWIEG-NTKKVVLAHLS 216 >gi|319942907|ref|ZP_08017190.1| beta-lactamase family protein [Lautropia mirabilis ATCC 51599] gi|319743449|gb|EFV95853.1| beta-lactamase family protein [Lautropia mirabilis ATCC 51599] Length = 268 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 27/213 (12%) Query: 4 YYHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 F ILGC G G P G P P RT SS + ++VD G Sbjct: 3 SMRFHILGCSGGLGGTPGTAG-----RPGRP--ART-SSFLVDHD--------ILVDAGT 46 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFES 121 + E + ID V TH H DHI + + ++RPI V+A P+ ++ L + Sbjct: 47 GV-EDLSVEDMRRIDHVFLTHSHLDHICALPLMLDTVGSSRERPIIVHALPETIQALKDH 105 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 D P P ++ + + + G PI H + ++GF Sbjct: 106 IFNWVIWPDFTEIPHFERPWMV-YSPLQVGHPVQIGNRTIRPITANH-TVPAVGFHIGAT 163 Query: 179 -GNVAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 G++ Y D ++ + +L LI++ Sbjct: 164 AGSLVYSGDTLPTEEFWRTVNGISDLRHLILET 196 >gi|237755883|ref|ZP_04584477.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691953|gb|EEP60967.1| metallo-beta-lactamase family protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 228 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 46/241 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDV 108 + +++D GP +++ + ++AV+ +H H DH+ I + K +D+ Sbjct: 6 AGKNILIDPGPGSLIRIFERGLEPNDLNAVVLSHRHLDHVADIASVVESATDSNKNKLDL 65 Query: 109 YA---------APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P +K+ + F+ IE ++ ++ I Sbjct: 66 LLAPIDAVDGDDPVVLKYTKKGFK------------------KIEITELGKIIEYENIKI 107 Query: 160 EAIPILQQHG--RISSLGFRFGN--VAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLH 214 + + I H SL F + N Y F + L +N D ++ + + Sbjct: 108 KPL-IKHIHPGADTYSLQFEYNNKIFIYVA-CGRFYEDMLYAYPENPDIMVFNTTFVKSN 165 Query: 215 SS--HFSLSESLKKIELINPKNAILTHMHVDLD-------YDMVLKSTPSRVVPAFDGMQ 265 + H S + + IE + PK ILTH + + + T +V+ A+DG++ Sbjct: 166 LNYYHLSAEDVERIIEKVKPKLTILTHFSLQMLRYTPFKIAKEMSDRTGLKVIAAYDGLK 225 Query: 266 F 266 Sbjct: 226 V 226 >gi|187935629|ref|YP_001886966.1| metallo-beta-lactamase domain protein [Clostridium botulinum B str. Eklund 17B] gi|187723782|gb|ACD25003.1| metallo-beta-lactamase domain protein [Clostridium botulinum B str. Eklund 17B] Length = 236 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 70/211 (33%), Gaps = 54/211 (25%) Query: 56 VIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G +F + L + + L TH H DH G++ K IDVY + Sbjct: 23 LLLELGINFKNIKKALNYDLSKVVGALVTHEHKDHSKGVNDA------MKSGIDVYMSEG 76 Query: 114 CMKH--LFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L ++F Y L G +P QH Sbjct: 77 TAAGIELKDTFYDYRLNYLKHS-------------------ESYKIGRFLVVPFNTQHDV 117 Query: 171 ISSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLD------------FLIIDALKNGL 213 LGF G + + TD K QN+D L + A ++ Sbjct: 118 NEPLGFLIYHPQIGKLLFATDTYYL----KSKFQNVDHILIECNYSEDVLLTLPAWRSRT 173 Query: 214 HSSHFSLS---ESLKKIELINPKNAILTHMH 241 SH SL E+L+ L K+ +L H+ Sbjct: 174 IKSHMSLETLKETLRTWNLEGTKDIMLIHIS 204 >gi|156933135|ref|YP_001437051.1| ribonuclease Z [Cronobacter sakazakii ATCC BAA-894] gi|166991103|sp|A7MHT9|RNZ_ENTS8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|156531389|gb|ABU76215.1| hypothetical protein ESA_00945 [Cronobacter sakazakii ATCC BAA-894] Length = 304 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 54/179 (30%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S G+P TR+ I + + + D G Sbjct: 1 MELTFLGT--SAGLPST----------------TRNVTAIVLNPQNNRSGLWLFDCGEGT 42 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR I+ + TH H DHI G+ GL P+++Y + + Sbjct: 43 QHQMLRATATPGKIEKIFITHLHGDHIFGLPGLLCSRSMAGCETPLEIYGPKGIAEFVET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + R L +N I + G + H + G+R Sbjct: 103 TLR-----LSGSWTSYPLNVHEITEGQL-----LDDGELTVTAYPLTH-PVECYGYRIE 150 >gi|33865074|ref|NP_896633.1| hypothetical protein SYNW0538 [Synechococcus sp. WH 8102] gi|41017537|sp|Q7U8S4|RNZ_SYNPX RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|33638758|emb|CAE07053.1| conserved hypothetical protein [Synechococcus sp. WH 8102] Length = 319 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 55/180 (30%), Gaps = 30/180 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRSEM--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q LR + + V TH H DH+ G+ GL G + +D+Y L Sbjct: 42 QHQFLRSDLRLSQLRRVFVTHMHGDHVFGLPGLLASLGLSGSCQDGVDLYGPDPLESFLK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + YP V+ + + + P+ R+ + +R Sbjct: 102 GALN---TSSTRIGYPLQVHRSRPAAEQGTLLFEDDELTVRCTPLTH---RVPAYAYRVD 155 >gi|312864763|ref|ZP_07724994.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] gi|311099890|gb|EFQ58103.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] Length = 269 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 75/221 (33%), Gaps = 47/221 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + + +DA+L TH H DHIHG+ L +K + Sbjct: 25 DKKKLLIDAGLSGKKITSLLAEIDRKPEDLDAILVTHEHKDHIHGVG-----VLARKYGL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + ++ K ++ + E V G I+ Sbjct: 80 PIYANEKTWQTM-DAHNMIGKVDPEQK-------HIFERGKV-----MTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAIDPQFYRFMKDDKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRSGAYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + S I I K L H+ + Sbjct: 187 SLKQRILSDKGHLSNEDGSETMIRTIGNRTKKIYLGHLSKE 227 >gi|91772705|ref|YP_565397.1| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242] gi|91711720|gb|ABE51647.1| protein with beta-lactamase-like domain [Methanococcoides burtonii DSM 6242] Length = 250 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 92/281 (32%), Gaps = 50/281 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++ P+ R +S + I V+ D G Sbjct: 3 MKITFLGTGVAI----------------PQKDRVQSGVLIEY-----GENKVLFDCGGGI 41 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFE 120 ++ VL ID ++ +H H DH+ + L +D +Y + L Sbjct: 42 LNRIFESGVLHTEIDTIVLSHLHLDHVADVMCLLKAN-WLCEKLDAVIYGPVGTQEWLGR 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + + + + + E ++ S G + H + SLG+R + Sbjct: 101 LMA-IYPYMKVKVNVEVREVVAGEEFEL-----SQGCNVRCT--DGIHS-VPSLGYRVEH 151 Query: 181 ----VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS--SHFSLSESLKKIELINPK 233 V Y D P +S+ KL Q D LI + +H + +E + Sbjct: 152 DGEVVVYSGDTE--PCDSIMKLAQGADMLIHECSFPLDFPMTNHATPDMLRPYLENSDIS 209 Query: 234 NAILTHMHVDL-DYDM-----VLKSTPSRVVPAFDGMQFSS 268 LTH++ + ++ + + V A D M Sbjct: 210 KVYLTHLYPHMQGHEKETLEYIKEKYEGEVHIASDLMTVEL 250 >gi|205353428|ref|YP_002227229.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|254808660|sp|B5RCD8|RNZ_SALG2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|205273209|emb|CAR38172.1| Ribonuclease Z [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628519|gb|EGE34862.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 305 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 80/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEVSAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA +S H S ++ I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANSRGHSSTRQTATLAREAAVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|319764912|ref|YP_004128849.1| cyclic-amp phosphodiesterase [Alicycliphilus denitrificans BC] gi|317119473|gb|ADV01962.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans BC] Length = 262 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 64/192 (33%), Gaps = 27/192 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C T K RT +S + ++VD G L E++ +D V TH H D Sbjct: 8 CSGTLAKGCRT-TSFLL--------GERILVDAGTGVGELTL-EEMQRVDHVFLTHSHLD 57 Query: 88 HIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLF-ESFRYCFKALDDRTYPPIVNPIVIEN 145 HI + L + RP+ V+A P + L F R P + + Sbjct: 58 HIAALPLLLDAVGAHRARPLQVHALPATLDALRAHVFNGVIWPDFTRIPTPQAPFVRLLP 117 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNL 201 V AG +E +P + ++G+ G Y D + Sbjct: 118 LGVGDVFVVAGTPLEVLPARH---SVPAVGYAARGQRGWWVYSGDTEGQEPAFWRR---- 170 Query: 202 DFLIIDALKNGL 213 ++AL+ Sbjct: 171 ----VNALRQSP 178 >gi|28211043|ref|NP_781987.1| hypothetical protein CTC01364 [Clostridium tetani E88] gi|28203482|gb|AAO35924.1| hypothetical membrane spanning protein [Clostridium tetani E88] Length = 648 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 24/204 (11%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D GP+ +V+ V +D V+ THPH DHI G+D Sbjct: 348 SILIQQ-----DGKNMLIDGGPNSSGKVVVDYLKSHGVTKLDYVIGTHPHEDHIGGLD-- 400 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + V+ ++F+ A++++ I P V E+ ++ + + Sbjct: 401 --VVINNFEIGQVFMPKATANT--QTFKSVVTAINNKGLK-ITTPKVGESYNLGNAVWTI 455 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + I + +FGN + D + K + LD D LK G Sbjct: 456 LAPSSDSYTDVNNYSIVTK-LKFGNNSFIFTGDAEDVSEGEILK-KQLDI-SADVLKVGH 512 Query: 214 HSSHFSLSESLKKIELINPKNAIL 237 H S+ S +E ++ +NPK A++ Sbjct: 513 HGSNSSTTE--DFLKKVNPKYAVI 534 >gi|219670911|ref|YP_002461346.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219541171|gb|ACL22910.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 270 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 52/172 (30%), Gaps = 37/172 (21%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G + L I+ + TH H+DHI G+ + +K I Sbjct: 20 EKRNFLVDCGISLKATLHNLAILDIAPSEIEGIFITHEHSDHIKGVGAVA-----RKLKI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA+ L P I + V AG + P Sbjct: 75 PIYASAKIWDELN---------------PSIGKLKDEQRVVVRDAFTCAGLRVRVFPTS- 118 Query: 167 QHGRISSLGFRFG----------NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H S G R + TD E + L+ D L+++A Sbjct: 119 -HDSQESFGVRVEVEQPVRGRSKAIGIATDTGIVTEEMHQALKGCDALVVEA 169 >gi|114570261|ref|YP_756941.1| coenzyme PQQ synthesis protein B [Maricaulis maris MCS10] gi|114340723|gb|ABI66003.1| coenzyme PQQ synthesis protein B [Maricaulis maris MCS10] Length = 320 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 60/279 (21%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +LG G G P++ DP +P RR +S+ + + + + + Sbjct: 29 SIELIVLGVGQDGGAPQLGNS---ADPAWEDPSLRRLATSIAL---VDHQLDERYLFEAT 82 Query: 62 PDFYMQVLR-------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 PD Q+ R E+ +D + TH H H G+ L + + + V+A P Sbjct: 83 PDIREQLYRLDQIAPTERRPGLDGIFLTHGHMGHYTGLMFLGHESMGAQG-VPVFAMPRM 141 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR--IS 172 +L + + +V I + + G + PI H + Sbjct: 142 ADYLTS----------NGPWSQLVRYENIALQPMHDGVAVEVGRLSVTPIAVPHRQEFTE 191 Query: 173 SLGFRFGNVA----YCTDVNAFPA-ESL---------EKLQNLDFLIIDALKNG------ 212 +G+R + D++++ E+ + + ++D +DA Sbjct: 192 VVGYRIDTPGLSAFFLPDIDSWEEWETWQDGTALRIEDVIASVDVAYLDATFFANGEILG 251 Query: 213 ------LHS--SHFSLSES-LKKIELINPKNAILTHMHV 242 H SH + L E + H + Sbjct: 252 RDMSGFPHPMISHSMARFADLPASERAKIR---FIHFNH 287 >gi|237732305|ref|ZP_04562786.1| ribonuclease Z [Citrobacter sp. 30_2] gi|226907844|gb|EEH93762.1| ribonuclease Z [Citrobacter sp. 30_2] Length = 305 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 94/318 (29%), Gaps = 79/318 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP T +N +++ ++ + + D G Sbjct: 1 MELLFLGT--SAGVP-----------TRSRNV---TAILLNLQHPTQAGL-WLFDCGEGT 43 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q+L +D + +H H DH+ G+ GL R + P+ +Y Sbjct: 44 QHQMLTTPFNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGNVQ-PLTLYGPKGLREFTE 102 Query: 116 KHLFESFRYCFKALD---------------DRTYPPIVNP-----IVIENNDVP------ 149 L S + LD T P+ +P I+ +D P Sbjct: 103 TALRLSGSWTDYPLDIVEITPGEIVDDGLRKVTAYPLAHPLECYGFRIQEHDKPGALDAN 162 Query: 150 ------------ICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCTDVNAFPAESLE 196 AG I HG + R +VA D A ++E Sbjct: 163 ALKAAGVKAGPWFQDLKAGKTIVLEDGRTIHGADFLAPATRGKSVAIFGDTGPC-ASAIE 221 Query: 197 KLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + +D ++ +DA +S H S ++ + I+TH+ D Sbjct: 222 LARGVDVMVHETTLDASMEEKANSRGHSSTRQAAQLALDAGVGRLIMTHVSSRYDEKGCQ 281 Query: 251 KSTPS------RVVPAFD 262 + A D Sbjct: 282 RLLAECKAIFPDTELAHD 299 >gi|204929228|ref|ZP_03220371.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321772|gb|EDZ06971.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 341 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 82/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 35 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 77 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 78 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 137 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 138 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 186 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 187 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVMLADGRQINGADYLAPAVAGKSVAIF 246 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ + I+TH Sbjct: 247 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREADVGRLIMTH 306 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 307 ISSRYDDKGCQRLLAECRAIFPATELAYD 335 >gi|315613220|ref|ZP_07888130.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315314782|gb|EFU62824.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 269 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKISSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|116073639|ref|ZP_01470901.1| Ribonuclease Z [Synechococcus sp. RS9916] gi|116068944|gb|EAU74696.1| Ribonuclease Z [Synechococcus sp. RS9916] Length = 315 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 80/300 (26%), Gaps = 88/300 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP T +N SS+ + + D G Sbjct: 1 MQVTFLGT--SSGVP-----------TRARNV---SSVALRLPQRSEL---WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V TH H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLAGNSSGVDLYGPDPLEAYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 R + YP + + + ++ ++ A P+ R+ + +R Sbjct: 102 VLR---TSSTRIGYPMAFHRVKEPAQQGTLVLEDDDIIVRATPLTH---RVPAYAYRIEQ 155 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 156 KPRAGRFDVAKAHALDIPPGPIYGELQQGRTVTLEDGRTIDGRDLCGPARPGVSVVYCTD 215 Query: 192 ----AESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNAILTHMH 241 ++E + D LI ++ + H + + + + K LTH+ Sbjct: 216 TVFCEAAVELARGADLLIHESTFSHAEAEMAFQRQHSTSTMAAQTAAEAGVKQLALTHLS 275 >gi|260062467|ref|YP_003195547.1| ribonuclease Z [Robiginitalea biformata HTCC2501] gi|88784032|gb|EAR15202.1| ribonuclease Z [Robiginitalea biformata HTCC2501] Length = 306 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 104/301 (34%), Gaps = 67/301 (22%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P+ +T S ++ +++D G M++ R ++ ID + +H H Sbjct: 8 CYAATPR-YQTHPSAQVLETG----GHLLLIDCGEGTQMELRRYRIRLARIDHIFISHLH 62 Query: 86 ADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHL---------FESFRYCFKALDDRTY 134 DH G+ GL F L ++RP+ +Y + + F F+ L Sbjct: 63 GDHFFGLPGLIATFQLLGRERPLHIYGPKGIREAISLLLRVGETRTRFALEFRELTSTQP 122 Query: 135 PPIVNPIVIENNDVPI--CMKSAGGVIEAIPIL--QQHGRISSLG-----FRF------- 178 I+ +E + +P+ + + G +I+ P + + G SLG +R Sbjct: 123 ETILANEKLEVSTLPLNHRIYANGFLIQRKPGMRKLRAGVAESLGVDKAYYRKIKQGADG 182 Query: 179 --------------------GNVAYCTDVNAFPAESLEKLQNLDFL-----IIDA-LKNG 212 + AYC+D P + ++ +D L ++ + Sbjct: 183 VAADGRTIPNHRLTEPPPPAASYAYCSDTAYKPELA-AWIRGVDTLYHESTFLETEARLA 241 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHV---DLDY--DMVLKSTPSRVVPAFDGMQFS 267 + H + ++ + IL H DL+ L P V A DG F Sbjct: 242 AETGHSTALQAARIARDAGVGRLILGHYSTRYRDLEAFRQEALGQFP-NVELAEDGKAFE 300 Query: 268 S 268 Sbjct: 301 W 301 >gi|257870082|ref|ZP_05649735.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804246|gb|EEV33068.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 268 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 78/232 (33%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + ++VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLYIE-----SNKKRILVDAGLSGKKITSLLDEVGRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + + V E V Sbjct: 73 ---VLARKYKLDVYANTKTWQAMDNMVGNI----------AVEQKHVFEMGKV-----LT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H + +RF + TD ++ D +L+ Sbjct: 115 MGDMDIESFGVSHDAAAPQFYRFHKDGKSFVMLTDTGYCSDHVRGIIKGADAYLVESNHD 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 ++ L+ G + H S + +L +++ N K L H+ + Sbjct: 175 LEMLRMGPYPWSLKQRILGDRGHLSNEDGALVMADILTDNTKRVYLGHLSKE 226 >gi|251795614|ref|YP_003010345.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247543240|gb|ACT00259.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 251 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 69/227 (30%), Gaps = 54/227 (23%) Query: 46 RVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 +S T++VD G +L + I ++ TH H DH G+ Sbjct: 15 CLSISNGRITILVDVGLPKTKVEKIILAAGIDPTKIHSIYVTHEHQDHARGL------AF 68 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K I VYA+ +K L ++ I + +C + Sbjct: 69 ADKYKIPVYASEGTLKALER-----------------LDSGRIMYHGKSLCFDAFDLEKH 111 Query: 161 --AIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDA 208 H LGF V+ D E L + N D + ID Sbjct: 112 MFVTAFNVSHDAYEPLGFVVQGKDCKVSVMMDTGCVTDEMLHYMANSDIYVFECNHDIDM 171 Query: 209 LKNGLHSS-----------HFSLSESLKKIELI---NPKNAILTHMH 241 + NG + + H S + + + + + +LTHM Sbjct: 172 VVNGEYPAATKSRILADTGHLSNDAAAEALAKLIKGRGEQILLTHMS 218 >gi|322516694|ref|ZP_08069603.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] gi|322124727|gb|EFX96165.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus vestibularis ATCC 49124] Length = 276 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 32 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + + ++ G I+ Sbjct: 87 DIYANEKTW-QIMDSKNMLGKVDNSQKHVFSRDKLL------------TFGDIDIESFGV 133 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 134 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRAGSYPW 193 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L + + Sbjct: 194 STKQRILSDQGHLCNEDGADAMIRSIGNKTKKIYLGHLSKENNIKELAHMTMENQL 249 >gi|168334162|ref|ZP_02692371.1| beta-lactamase domain protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 268 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 30/210 (14%) Query: 50 RGSNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++ +++D G + + L E ++A++ +H H DH G+ Sbjct: 30 EWNDLRILLDCGAESNNSSIINVQKTLGEDFNKLNAIIISHAHKDHYGGLF---NNVFSD 86 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I + P + + + + R I + +V I + Sbjct: 87 SHRI--ISTPITKQKIRTCMPH----NNLRINYIIETIYTFDYFEVFFAAHG-NAQITFL 139 Query: 163 PILQQHGR----ISSLGFRF---GNVA-YCTDVNAFPAESLEKLQNLDFLIIDAL--KNG 212 P G I G + G+ + + F ++L+ ++NLD LII+ + Sbjct: 140 PAGHIDGAAMTLIQIDGKKILYTGDFSLPLSTCEPFIKQTLKLIRNLDILIIEGTNNRET 199 Query: 213 LHSS---HFSLSESLKKIELINPKNAILTH 239 H S H +E + I+ P+ L H Sbjct: 200 GHKSSIKHARFNELYELIKFTYPQKIFLVH 229 >gi|298530507|ref|ZP_07017909.1| metal-dependent hydrolase [Desulfonatronospira thiodismutans ASO3-1] gi|298509881|gb|EFI33785.1| metal-dependent hydrolase [Desulfonatronospira thiodismutans ASO3-1] Length = 279 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 32/222 (14%) Query: 50 RGSNTTVIVDTGPDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I+D G +L+EQ L D + +TH H DHI G+ + + I Sbjct: 33 NDQGGRIILDAGTGIRRLGAVLLKEQALKTD-LFFTHTHWDHIMGLPFFQPLYQP-GFSI 90 Query: 107 DVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++Y P + F+ F+ P I + ++ G +E I + Sbjct: 91 NLYGQPRLQGDIHRLVFKDLFR-PPHFPVPYSRVMSQINYQEFQGGVEVQGFYLETIALS 149 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFP---------AESLEKLQNLDFLIIDA---- 208 H + GFR + + TD N E + ++ D L+ D+ Sbjct: 150 --HPNLGQ-GFRISSSGRTFVFLTD-NELGYCHRGGASFEEYVRFARDADLLVHDSEFTP 205 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + H + ++++ K L H + D + Sbjct: 206 EEYRQKTGWGHSTCMQAMELAAASRVKRLGL--FHHNQDRND 245 >gi|163943142|ref|YP_001648026.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163865339|gb|ABY46398.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 264 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|296131710|ref|YP_003638957.1| hypothetical protein TherJR_0165 [Thermincola sp. JR] gi|296030288|gb|ADG81056.1| conserved hypothetical protein [Thermincola potens JR] Length = 266 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 68/181 (37%), Gaps = 35/181 (19%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + NT+VIVD G + +Q + E S+ A+L TH H+DHI G+ L Q+ Sbjct: 18 KSDNTSVIVDAGMSGKALEAKIQAMGELCESLSAILITHEHSDHIKGVG-----VLAQRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY + L S + P V+E ++ Sbjct: 73 DLPVYVTEKTWRALQFSLGKIQEQQVCCFRPG----HVLE-----------IDSLKIETF 117 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ F + TD +E ++K++ + I++A L+ G + Sbjct: 118 STSHDAADPVGYVFYEGDTKASIITDTGCMTSEIVKKVRGSHYFILEANHDIEMLQRGPY 177 Query: 215 S 215 Sbjct: 178 P 178 >gi|229136287|ref|ZP_04265034.1| hypothetical protein bcere0014_51560 [Bacillus cereus BDRD-ST196] gi|228647159|gb|EEL03247.1| hypothetical protein bcere0014_51560 [Bacillus cereus BDRD-ST196] Length = 249 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|90962068|ref|YP_535984.1| ribonuclease Z [Lactobacillus salivarius UCC118] gi|122448828|sp|Q1WT50|RNZ_LACS1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|90821262|gb|ABD99901.1| Ribonuclease Z [Lactobacillus salivarius UCC118] Length = 317 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 84/295 (28%), Gaps = 79/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S ++ + D G Sbjct: 1 MELEFLGTG-----------------AGSPSKSRNVSA-VALKLLDEIKKIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYAAPDCMKHL 118 Q+L + ID + TH H DHI G+ G R + +K P+ +Y + Sbjct: 43 QHQILNTTIRPRKIDKIFITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTIYGPKGISDFV 102 Query: 119 ----------------------------FESFR-YCFK----------ALDDRTYPPIVN 139 + F+ Y +K ++++ YP + Sbjct: 103 NISLKVSQTKLSYELNFVELEEEGLLLENDRFKVYAYKLDHRIECWGYRIEEKDYPGELQ 162 Query: 140 PIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDVNAFPAES 194 + P AG V+ G+ + G + D P Sbjct: 163 VEKLREAKAPSGPIYGRLKAGEVVTLEDGRTIDGKDFIGKAKKGRIVTILGDTRQTPNLK 222 Query: 195 LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L ++ D L+ ++ L H H + ++ + + K +LTH+ Sbjct: 223 L-LAKDADVLVHESTFGKGEGKLARNYH--HSTCVQAATLAKEVGVKQLLLTHIS 274 >gi|261880520|ref|ZP_06006947.1| ribonuclease Z [Prevotella bergensis DSM 17361] gi|270332743|gb|EFA43529.1| ribonuclease Z [Prevotella bergensis DSM 17361] Length = 304 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPH 85 C P R + SS + ++D G MQ+ R I A+L +H H Sbjct: 11 CGSALPTLRHSASSQVVEIRG-----KFFMIDCGEGTQMQLRRTHVGFTKIQAILISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F R P+ +YA P ++ + +S F + + + + Sbjct: 66 GDHCFGLIGLISTFGMLGRTAPLHIYA-PKSLEPMLDSMVQMFCPNLEYS----ITFHAV 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + IEAIP+ RI G+ F Sbjct: 121 DTSQQSVIYEDRSMTIEAIPLEH---RIPCCGYLF 152 >gi|237746767|ref|ZP_04577247.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes HOxBLS] gi|229378118|gb|EEO28209.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes HOxBLS] Length = 260 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 55/242 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVL----SIDAVLYTHPHADHIHGIDGL 95 SL +S + + T V+VD G V R E+V + A++ TH H+DH G+ Sbjct: 14 SLLVS-AKDGLTTTFVMVDCGFGTRETVRRLERVGCSPSDLSALIVTHEHSDHAGGV--- 69 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 ++ I V+ + + L + F I+ + Sbjct: 70 --LAFARRHRIPVWMSYGTFQALGKDFS------------------EIDLSFCRDGDCFN 109 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G ++ H L F + TD L L D L+++ Sbjct: 110 VGDLQISAFTVSHDAKEPLQFHMTDGAVKFGMLTDTGQTTPHILNALSGCDALMVECNYD 169 Query: 209 ---LKNGLHS---------------SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 LKN + +H E L +I+ K I H+ + ++ + Sbjct: 170 DLMLKNSSYPFYLKKRIGSIYGHLSNH-CAGEFLAQIDQSRLKKVIGAHLSQNNNFPELA 228 Query: 251 KS 252 K Sbjct: 229 KQ 230 >gi|271963758|ref|YP_003337954.1| ribonuclease Z [Streptosporangium roseum DSM 43021] gi|270506933|gb|ACZ85211.1| ribonuclease Z [Streptosporangium roseum DSM 43021] Length = 324 Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 94/336 (27%), Gaps = 108/336 (32%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG +++ PT +N R + D G Sbjct: 5 ELVVLGTSSAV-------------PTRHRNHNG--------YLLRWDGQGFLFDPGEGTQ 43 Query: 66 MQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+L V + D + TH H DH G+ G+ + I A + ++ Sbjct: 44 RQMLHAGVGAHDITWICVTHFHGDHCLGVPGIV-------QRI---ARDGVAHEVQAAYP 93 Query: 124 YCFKALDDRTY--PPIVNPIVIENNDVPICM-KSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + VI V + G + H + S G+R Sbjct: 94 ATGETYWRRLRHASAFADTSVITERPVSGPVTTFEAGPVTLTARPLSH-PVESYGYRLDE 152 Query: 179 ----------------------------------GNVAYCTDVNAF-PAESLEKL----- 198 G++ D + P +S + Sbjct: 153 PDGRRMIPSLLAERGIRGPSIGELQRTGSVTAPDGSLVRLADCSGLRPGQSAAFIMDTRL 212 Query: 199 --------QNLDFLIID----------ALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + +D L+I+ A + G H + +++ + ++ +LTH+ Sbjct: 213 CEGVFALAEGVDLLVIESTFLSGEEALASRYG----HLTAAQAGRVAAESGARSLVLTHL 268 Query: 241 HVDLDY-------DMVLKSTPSRVVPAFDGMQFSSP 269 D + +S VV A D M+ P Sbjct: 269 SERYDAEDGPRFLEEAHRSFDGDVVLAHDLMRVPVP 304 >gi|258508788|ref|YP_003171539.1| metal-dependent hydrolase [Lactobacillus rhamnosus GG] gi|257148715|emb|CAR87688.1| Metal-dependent hydrolase [Lactobacillus rhamnosus GG] gi|259650094|dbj|BAI42256.1| hydrolase [Lactobacillus rhamnosus GG] Length = 245 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 44/242 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DH + L+ ++ +K Sbjct: 25 ESGDYHLLMDLGSGGLLALEKVFDPLQLDAVLLTHYHHDHTADVGVLQYFYQLRKGNKKV 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F F T ++ G + Sbjct: 85 SPLPIYGHTKDPLNFGSLTFG-PFTQGIGYTGDSTLHL----------------GPLTLT 127 Query: 163 PILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH 214 + QH + + R + +D F + ++ D L+ D L + Sbjct: 128 FLETQH-PVPAFAVRIKEEGTNKVLVNTSDTRYFSGL-VPFAKHADLLMADTNFLADQPA 185 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLD-------YDMVLKSTPSRVVPAFDGMQF 266 H + E+ + K ++LTH+ LD V P + A D + Sbjct: 186 PRWHLTAPEAGTLAKEAQVKRSLLTHLPQQLDLVTLKDQAQAVAGGIP--IDVARDDLTI 243 Query: 267 SS 268 + Sbjct: 244 NV 245 >gi|329954911|ref|ZP_08295928.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] gi|328527015|gb|EGF54026.1| metallo-beta-lactamase domain protein [Bacteroides clarus YIT 12056] Length = 267 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 53/230 (23%) Query: 56 VIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHI---HGIDGLRGYFLKQKRPID 107 +++D G + L+E + I AV TH HADHI G+ I Sbjct: 26 ILIDAGIAVRIIKKGLKEAGINMEMIRAVFVTHDHADHIKAVGGLGEKLN--------IP 77 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + +S+ K Y P+ +E+ Sbjct: 78 IYTTARIHEGINKSYCMTEKLHSSVRYLEKQQPMQLED-------------FHIESFEVP 124 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H ++G+ ++ TD+ + + ++LI++A L+ G + Sbjct: 125 HDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAHYICKANYLILEANYDDEMLRMGTYPQY 184 Query: 216 ---------SHF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H +++ + E I + L H+ D ++ + T Sbjct: 185 LKERITSRTGHMSNIATAEFLAENITEHLQYIWLCHLSKDNNHPELAYKT 234 >gi|312864353|ref|ZP_07724586.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] gi|311100074|gb|EFQ58285.1| metallo-beta-lactamase domain protein [Streptococcus downei F0415] Length = 258 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 40/226 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTGHDGFQLLMDAGSRAVTELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y + Y F L + + G Sbjct: 81 KHLWEPKVLPIYGHDED--------SYEFAKLTMAGVS--------QGQAYDVAGTQQIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + + + D + D Sbjct: 125 PFDISFIKTVH-PVPCYAFRILERETGQVLVFTGDTGYFDGLA-DFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM------HVDLDYDM 248 H +H + E+ + + K +LTH+ +D D+ + Sbjct: 183 EGNENHPAHLTSKEAGQIAQEAAVKKLVLTHVPPLPPQGIDSDHHL 228 >gi|46124515|ref|XP_386811.1| hypothetical protein FG06635.1 [Gibberella zeae PH-1] Length = 840 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 86/299 (28%), Gaps = 65/299 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S+ P R SS I ++D G Sbjct: 547 EIIPLGTGSSI----------------PGKYRNVSSTLIRVPG----IGNYLLDAGEGTL 586 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMK 116 Q+ R + + ++ +H HADH G L + ++ + Sbjct: 587 GQIRRLFGEKETGNILRDLKCIVISHLHADHHLGTPMLIKAWYEHTINN----SNAKLAI 642 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG---------GVIEAIPILQQ 167 ++ + + + G G+ I Sbjct: 643 SCVARYQALLEEVSQVEDIGFHRLHFPNAEADTNTKRGHGRYELKDNTFGLKAITRIPVP 702 Query: 168 HGRIS-------SLGFRFGNVAYCTDVNAFPAESLEK-LQNLDFLIIDALKNG---LHSS 216 H ++ + G R AY D P+ Q L+ + + H+ Sbjct: 703 HCWLAMATELELTSGLRI---AYSGDCR--PSTEFATTCQGAHLLVHECTFDDDMISHAK 757 Query: 217 ---HFSLSESLKKIELINPKNAILTHMHVD-LDYDMVLKSTPS---RVVPAFDGMQFSS 268 H ++SE+L + + + +LTH + D + + V+ AFD M+ Sbjct: 758 KKMHSTMSEALGIAKQMKARKTLLTHFSQRYVKADSLKEQKRDDSGDVLMAFDHMKVKL 816 >gi|197118715|ref|YP_002139142.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197088075|gb|ACH39346.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 257 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 38/182 (20%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + R ++D +L TH H DHI G+ ++ + Sbjct: 20 DGCRLLIDAGLSGRETIARLSSIGVDAATLDGILITHEHTDHIRGVGATA-----RRLKL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V + ++ ++ + + P Sbjct: 75 PVLGSARTLQAARHVIG------------------RVDYVEFEPGTSFVFKGVSIDPFPV 116 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSS 216 H +G+R G + + TD+ + +KL+ L+++ L++G + Sbjct: 117 THDACDPVGYRIESGEGGIGFATDLGIATRLTHDKLKGCRALVLEFNHDERMLQDGPYPW 176 Query: 217 HF 218 H Sbjct: 177 HL 178 >gi|320086745|emb|CBY96517.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 334 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 80/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 28 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 70 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 71 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 130 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 131 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 179 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 180 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 239 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 + Q +D ++ +DA ++ H S ++ I+TH Sbjct: 240 GDTAPCEAAFALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTH 299 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 300 ISSRYDDKGCQRLLAECRAIFPATELAYD 328 >gi|315427186|dbj|BAJ48800.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 262 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 98/289 (33%), Gaps = 67/289 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 TILG G+ I P +R S + I T +++D GP Sbjct: 3 RITILGAGS------IA----------PSEKRFGSGVFIEA-----EETRLLIDPGPGTI 41 Query: 66 MQVLREQVLSID--AVLYTHPHADHIHGIDGLR-GYFLK-------QKRPIDVYAAPDCM 115 +++R V + AVL +H H DHI + L + Q + + + Sbjct: 42 YKLIRLAVNPLSLTAVLISHFHLDHISDLLPLIMMWCYDEEGKPSSQPKNLHLIGPSGLH 101 Query: 116 KHLFE-----SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 K + + +F Y K + R + I + V G + +H Sbjct: 102 KLVEQVISIDAFSYLNKPMQVRRFLQIDEMRHGDMRQV--------GECKITAAEVEH-- 151 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLH----SSHFSLS 221 ++ L ++ N+ Y D P + L + +N D LI + H H S Sbjct: 152 LNGLAYKITHRGKNIVYSGDT--VPDKHLIDLAKNCDLLIHECS--FPHQQLIGKHTSEK 207 Query: 222 ESLKKIELINPKNAILTHMH-------VDLDYDMVLKST-PSRVVPAFD 262 + + NP+ +TH++ ++ + P + A D Sbjct: 208 QLAEIAAKTNPRKIAVTHLYPTWSGREHEITEALKQAGIPPENITVAED 256 >gi|289548930|ref|YP_003473918.1| beta-lactamase [Thermocrinis albus DSM 14484] gi|289182547|gb|ADC89791.1| beta-lactamase domain protein [Thermocrinis albus DSM 14484] Length = 253 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 50/231 (21%), Positives = 89/231 (38%), Gaps = 29/231 (12%) Query: 53 NTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDV 108 + VD GP Y+ + +ID V+ +H H DH ++ + + R + + Sbjct: 33 GVWIHVDPGPGAFVYLHQMGLDPRNIDIVVLSHLHLDHSADVNVVIEAASEGGKNRRVVL 92 Query: 109 YAAPDCMKH-LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 A ++ Y K Y + +K AG I A+ + Sbjct: 93 VAPRTALEGEDRVVLPYIRKERVGAEYV----------LEEGTEIKHAGISIRAVMKHRH 142 Query: 168 HGRISSLGFRFGN-VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHS--SHFSLSES 223 HG + + F N V Y + + + L+ +N+D II+ H S+ ++ Sbjct: 143 HG-VETYALLFDNRVLYVS-CALYEDKMLDMYPKNVDVTIINTTLYKKSKYVEHLSVEDA 200 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV--------PAFDGMQF 266 K I + PK A+LTH ++ +M ++ S V A+DGM+ Sbjct: 201 KKIIGSVRPKLAVLTHFGYEILKNMDPQAIASEVEESTGIRTVSAYDGMEV 251 >gi|323489829|ref|ZP_08095053.1| metallo-beta-lactamase family protein [Planococcus donghaensis MPA1U2] gi|323396464|gb|EGA89286.1| metallo-beta-lactamase family protein [Planococcus donghaensis MPA1U2] Length = 244 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 39/223 (17%) Query: 33 PKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG 91 KN T S+ I + R +VD G V ++ +DAV+ +H H DH+ Sbjct: 14 NKNEAT-SAFLIEQDGFRC-----LVDCGSGVLGAVQNYTELRELDAVIISHYHPDHVAD 67 Query: 92 ID-----GLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 I + G LK+ P+ +YA ++ + +Y + I+ Sbjct: 68 IGVLQHAAMVGMQLKEWNTPLYIYAHDKDLE-----------EFNKLSYKGVTEGRAIQA 116 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---GNVAYCT-DVNAFPAESLEKLQNL 201 ++ G + H + L RF G A T D E ++ ++ Sbjct: 117 SE-----TLELGPWKVTFCETIH-PVYCLAMRFTANGRTAVFTADTAW-KDELIDFSRDA 169 Query: 202 DFLIIDALKNGLH----SSHFSLSESLKKIELINPKNAILTHM 240 D L+ ++ + H S S++ K E K +LTH+ Sbjct: 170 DLLVAESNLYEKYIGIIGGHMSGSQAGKLAEQAGAKQLLLTHL 212 >gi|322375299|ref|ZP_08049812.1| VicX protein [Streptococcus sp. C300] gi|321279562|gb|EFX56602.1| VicX protein [Streptococcus sp. C300] Length = 269 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|194737306|ref|YP_002115383.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712808|gb|ACF92029.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 341 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 45/329 (13%), Positives = 82/329 (24%), Gaps = 97/329 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG S GVP R + + + + D G Sbjct: 35 DKMELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGE 77 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 78 GTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFI 137 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 138 ATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 186 Query: 179 ------------------------------GNVAYCTDVNAFP----------------- 191 G D Sbjct: 187 VEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIF 246 Query: 192 ------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTH 239 +L Q +D ++ +DA ++ H S ++ + I+TH Sbjct: 247 GDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREADVGRLIMTH 306 Query: 240 MHVDLDYDMVLKSTPS------RVVPAFD 262 + D + A+D Sbjct: 307 ISSRYDDKGCQRLLAECRAIFPATELAYD 335 >gi|167629947|ref|YP_001680446.1| conserved beta-lactamase domain protein [Heliobacterium modesticaldum Ice1] gi|167592687|gb|ABZ84435.1| conserved beta-lactamase domain protein [Heliobacterium modesticaldum Ice1] Length = 282 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 80/265 (30%), Gaps = 57/265 (21%) Query: 46 RVSERGSNTTVIVDTGPDFY---MQVLREQVLSID-AVLYTHPHADHIHGIDGLRGYF-- 99 V R I+D G Y +L+ I A L +H H DHI G +F Sbjct: 33 CVQVRIGERDFIIDAGSGLYHLGQALLKNNSGPIRGAFLISHIHWDHIQGF----PFFGP 88 Query: 100 -LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG- 157 + +Y L +F F+ Y P++ +E + G Sbjct: 89 AFADQNRFALYG----QAKLGRTFADLFRGQMQPPYFPVL----LEAMGAQLDFHDLSGG 140 Query: 158 -------VIEAIPILQQHGRISSLGFRFG----NVAYCTD---VNAFPAESLEKLQNLDF 203 I +L H L +R + Y +D + + D Sbjct: 141 EVLDFDDGITVRTVLTNHPD-GCLAYRIEQGGRSCCYLSDTEHCASVDPVLKAFIAGADL 199 Query: 204 LIIDA-----------LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY----- 246 +I DA L+ H + E +K ++ K +L H ++ Sbjct: 200 VIYDACYTDEEYKGEGLQPSRKGWGHSTWQEGVKLMQAAGAKTLVL--FHHAVERTDADM 257 Query: 247 ---DMVLKSTPSRVVPAFDGMQFSS 268 + + K+ + A +GM Sbjct: 258 QRIEEMAKAAYPDCLAAREGMTIRL 282 >gi|302865942|ref|YP_003834579.1| beta-lactamase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302568801|gb|ADL45003.1| beta-lactamase domain protein [Micromonospora aurantiaca ATCC 27029] Length = 248 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 77/238 (32%), Gaps = 35/238 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP 105 +++D G +L + +DAV +H H DH + L R + P Sbjct: 25 EHDGFRLLIDPGYATLQPLLALTRAEHVDAVYVSHGHPDHCADLQPLVRARVLANRSGPP 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA + L P ++ P P G E Sbjct: 85 LPVYAPTGSLAGLLA-----------IDEPGLLEPGYRLTGFTP-GETLRLGPYEVRTFA 132 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALK----NGLHSSH 217 H + + G RF +AY D PA +E ++ D LI +A H Sbjct: 133 LPH-WVPNAGARFSAAGLVLAYTGDTGPSPAL-VELARDADLLIAEATYPDDIPQRHEG- 189 Query: 218 FSLSESLK---KIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 +LS +++ + +LTH+ + L + V A G+ + Sbjct: 190 -NLSSAVEVGRYAAEAGVRRLLLTHLWPGTEPREALAAVRRGFAGPVEVAAPGLTVTV 246 >gi|229170164|ref|ZP_04297851.1| hypothetical protein bcere0007_50980 [Bacillus cereus AH621] gi|228613309|gb|EEK70447.1| hypothetical protein bcere0007_50980 [Bacillus cereus AH621] Length = 249 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|75759266|ref|ZP_00739366.1| Ribonuclease Z [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493272|gb|EAO56388.1| Ribonuclease Z [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 318 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 88/285 (30%), Gaps = 81/285 (28%) Query: 21 ITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDA 78 I +W C + R S + + ERG T + D G Q+L V I+ Sbjct: 16 IFRNWCRCSFKRKE----RFSNALQLLEERG--QTWLFDCGEATQHQILHTSVRPRRIEK 69 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF----------------- 119 + TH H DHI G+ GL G Q P+ VY + + Sbjct: 70 IFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKGIKQFIEVALSVSTTHVKYPLEVV 129 Query: 120 -------------------------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 E F Y D + + + + PI + Sbjct: 130 EITEEGTVFEDNEFYVETKRLSHGIECFGYRIVEKDIQGALLVDKLLEMGVKPGPIFKRL 189 Query: 155 AGGVI------------EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD 202 G + E I Q+ GRI ++ G+ YC S E Q+ D Sbjct: 190 KDGEVVELEDGTILNGNEFIGPPQK-GRIITI---LGDTRYC-------EASRELAQDAD 238 Query: 203 FLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L+ +A + H + ++ N K ILTH+ Sbjct: 239 VLVHEATFAAEDEQQAHDYFHSTSKQAASIALQANAKRLILTHIS 283 >gi|294501160|ref|YP_003564860.1| ribonuclease Z [Bacillus megaterium QM B1551] gi|294351097|gb|ADE71426.1| ribonuclease Z [Bacillus megaterium QM B1551] Length = 309 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 63/178 (35%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +R SSL + + ERG+ + D G Sbjct: 1 MELLFLGTGA--GVPA--------------KQRNVSSLALELLQERGAV--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+L V I+ + TH H DHI+G+ G G Q + VY K + E Sbjct: 43 QHQILHTTVKPRRIEKIFITHLHGDHIYGLPGFLGSRSFQGGESLLTVYGP----KGIKE 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 P+ + E ++ + +E +HG I S G+R Sbjct: 99 FIEVTLAVSQTHLQYPLEIVEIEEESESGTIFEDETFSVEF--GKLEHG-ILSYGYRV 153 >gi|254430575|ref|ZP_05044278.1| ribonuclease Z [Cyanobium sp. PCC 7001] gi|197625028|gb|EDY37587.1| ribonuclease Z [Cyanobium sp. PCC 7001] Length = 325 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 51/179 (28%), Gaps = 29/179 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RSRNVSAVALRLPQRSEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + + TH H DH+ G+ GL ID+Y +L Sbjct: 42 QHQFLRSDLRVSQLRRIFVTHMHGDHVFGLPGLLASLGLAGNCPGIDLYGPDRLRDYLE- 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + Y + + + G + H R+ + +R Sbjct: 101 --GVLHTSSTRIGY--TIRHHRVRGAAEAGTLLLDDGELTVRCTALTH-RVPAYAYRID 154 >gi|126667041|ref|ZP_01738016.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Marinobacter sp. ELB17] gi|126628447|gb|EAZ99069.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Marinobacter sp. ELB17] Length = 322 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG S G P R + +S G +VD G Sbjct: 1 MEFTFLGT--SAGTPT---------------RSRNVTAL--ALSHSGHKPWYLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+LR V+ + A+ TH H DH G+ GL L + P+D+ A + + Sbjct: 42 QHQLLRAHYSVMQLRAIFITHIHGDHTFGLPGLLTSASMLGRTEPLDIVAPVQTQRFINA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + D + +N I E D + G + H R+ + F Sbjct: 102 TL-----ENSDSSLGYTLNFINSEAPDFCWKDQDFG----VTNVALSH-RVPCRAYVF 149 >gi|304314905|ref|YP_003850052.1| metal-dependent hydrolase [Methanothermobacter marburgensis str. Marburg] gi|302588364|gb|ADL58739.1| predicted metal-dependent hydrolase [Methanothermobacter marburgensis str. Marburg] Length = 255 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 86/234 (36%), Gaps = 28/234 (11%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPID 107 + VD GP +DAV+ +H H DH + L + ++ Sbjct: 23 GGMNIHVDPGPGALVRSYQFDADPRKLDAVMVSHSHTDHYTDAEVLIEAMTRGMTRQNGT 82 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V + + + ++ ++P G IE + Sbjct: 83 VVGSVSVIDGYRDWGPCISDYHKRKSRCLTLSP----------GETVEIGEIEVMGTGTV 132 Query: 168 HGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLS 221 HG + +GF R G+ V+Y +D F S E ++ D LI ++ G H Sbjct: 133 HGDPTGVGFKLRAGDLTVSYTSDTEYFDGLS-EYHRDADVLIASVIRPGNDHIRGHMCTD 191 Query: 222 ESLKKIELINPKNAILTHMHV-------DLDYDMVLKSTPSRVVPAFDGMQFSS 268 + +K +E + P A+++H+ + +++ V + T R + A DGM+ Sbjct: 192 DFIKLVEEVEPGLAVMSHLGMKMILNDPEMEAFRVQEVTGIRTLAARDGMKIEL 245 >gi|206560527|ref|YP_002231292.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] gi|198036569|emb|CAR52466.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] Length = 258 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 73/225 (32%), Gaps = 51/225 (22%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L V +DA+L TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLGVADLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID----- 207 + +P H L F F + TDV L D L+++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGMATPHITAVLSGCDALVLESNHDT 170 Query: 208 ----ALKN--------GLHSSHFSLSESLKKIELINPKNAILTHM 240 A + G + H S + + + + + + L H+ Sbjct: 171 AMLAASRYPQSLKARIGGNHGHLSNDAAAEILASL--ERSRLQHL 213 >gi|168209849|ref|ZP_02635474.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|168217375|ref|ZP_02643000.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|169342273|ref|ZP_02863353.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169299654|gb|EDS81712.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|170712072|gb|EDT24254.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|182380566|gb|EDT78045.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 263 Score = 62.5 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 55/251 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSEKTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H ++S G+ + + TD+ F E L ++ + +++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKHKGKSASIATDIGTFTEEILRNIRESEVILLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVL 250 +K G + H S + K I I + IL H+ + + Sbjct: 169 VQMVKFGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELA 228 Query: 251 KSTPSRVVPAF 261 + V+ A Sbjct: 229 EQAVINVLNAH 239 >gi|228994181|ref|ZP_04154081.1| hypothetical protein bpmyx0001_49040 [Bacillus pseudomycoides DSM 12442] gi|228765633|gb|EEM14287.1| hypothetical protein bpmyx0001_49040 [Bacillus pseudomycoides DSM 12442] Length = 264 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Q + I +L TH H+DHI G+ L +K + Sbjct: 22 EKQKLLIDAGLSGKATEALFQQAELNIQDISGILVTHEHSDHIKGLG-----VLARKYQL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + P V DV G IE Sbjct: 77 PVYANEKTWSAMEHLIGNI----------PTDQKFVFSIGDVK-----TFGDIEVESFGV 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD ++ + + ++ L+ G + Sbjct: 122 SHDAAEPMFYAFHHNGRKLALITDTGYVSDRMKGIIKGANAFVFESNHDVEMLRMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I K+ L H+ +D Sbjct: 182 SIKRRILSDVGHVSNEDAALAMADVITDETKHIYLAHLSLD 222 >gi|229065121|ref|ZP_04200414.1| hypothetical protein bcere0026_51740 [Bacillus cereus AH603] gi|228716150|gb|EEL67869.1| hypothetical protein bcere0026_51740 [Bacillus cereus AH603] Length = 249 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|227495767|ref|ZP_03926078.1| metal-dependent hydrolase [Actinomyces urogenitalis DSM 15434] gi|226834696|gb|EEH67079.1| metal-dependent hydrolase [Actinomyces urogenitalis DSM 15434] Length = 276 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 86/269 (31%), Gaps = 58/269 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT----TVIVDT 60 T++GC S+ P D A SS + T +V++D Sbjct: 1 MKITVIGCTGSMSGP----DSSA------------SSYLVQARGMSAEGTERTYSVVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM--KH 117 GP Q+LR +DA++ +H HADH+ +D + + ++ P + Sbjct: 45 GPGSMGQMLRYIDPADLDALVISHCHADHM--VDLVGMHVFRRWNPAGALGPVLTIGPAE 102 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L R + TY G + P H + + G+R Sbjct: 103 LPARLRGVDGTSEAETYATEFTFRTAVPGQ-----SIQIGPMTITPFEALH-PVEAYGYR 156 Query: 178 FGN---------------VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHF 218 +A+ D ++ +DFL+ +A ++ + H Sbjct: 157 IEGPSQSLGQDGVPTRAAMAFTGDT-DLTESMIDMADGVDFLLAEAAFVEGRDTVRGMHL 215 Query: 219 SLSESLKKIELIN---PKN----AILTHM 240 + + + P+ +LTH+ Sbjct: 216 TGKRAGELAAGTAGQTPRRPVGHLVLTHI 244 >gi|297618954|ref|YP_003707059.1| ribonuclease Z [Methanococcus voltae A3] gi|297377931|gb|ADI36086.1| ribonuclease Z [Methanococcus voltae A3] Length = 336 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 36/182 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T LG AS VP R + L + E + D G + Sbjct: 3 LTFLGTSAS--VPT--------------KERAHTGLALRYNGE-----YFLFDCGENVQR 41 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAP---DCMKHLF 119 Q++ V I+ + +H H DHI G+ GL +K+P+ ++ P + ++++ Sbjct: 42 QMMSTNVSPMKINNIFISHLHGDHILGLGGLLQSMALSNRKKPLKIFGPPKITETVENIL 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + Y + D + P I + + ++G E H + SL + F Sbjct: 102 K-IGYHSISYDIEVVELELKPNKI------LSVNNSGNGYEIYCYPTNHS-VPSLAYIFK 153 Query: 180 NV 181 + Sbjct: 154 EL 155 >gi|149375343|ref|ZP_01893114.1| metallo-beta-lactamase family protein [Marinobacter algicola DG893] gi|149360379|gb|EDM48832.1| metallo-beta-lactamase family protein [Marinobacter algicola DG893] Length = 326 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG S G P R S + G ++D G Sbjct: 1 MEFTFLGT--SAGTPT---------------RSRNVSGL--ALCHSGPKPWYLIDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+LR + V+ + A+ TH H DH G+ GL L + P+D+ A + Sbjct: 42 QHQLLRTRYSVVQLRAIFITHIHGDHTFGLPGLLTSASMLGRTEPLDIIAPTQV-----Q 96 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F A D + +N I E +D + + + H R++ + F Sbjct: 97 RFISAVLANSDSSLSYSLNFIDSEASDFQWQDE----HVRVTNVALSH-RVACRAYVF 149 >gi|330903719|gb|EGH34291.1| carbon-phosphorus lyase complex accessory protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 69 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 204 LIIDAL---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK--STPSRVV 258 L++D + +H L+ +L+ IE + P A+LTH+ LD ++ + P V+ Sbjct: 2 LVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMERGQRLPDHVL 61 Query: 259 PAFDGMQF 266 D M Sbjct: 62 IGLDSMAL 69 >gi|291540989|emb|CBL14100.1| RNAse Z [Roseburia intestinalis XB6B4] Length = 358 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 85/287 (29%), Gaps = 81/287 (28%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R + +++++D G + ++E+ ID + +TH HADHI G+ GL +R Sbjct: 78 RYNGSSLLIDCGEGTQI-AIKEKGWTFKPIDVICFTHYHADHISGLPGLLLSMGNAERTE 136 Query: 107 DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + P ++ + + R L IE + ++ G I A Sbjct: 137 PLTMIGPKGLERVVGALRMIAPELP-------FEIRYIEIMEPEADIEINGYHIHA--FR 187 Query: 166 QQHGRISSLGF-----RFGNVA-------------------------------------- 182 H I+ G+ R G + Sbjct: 188 VNH-NITCYGYTVEIRRAGRFSVEHAKEREIPQKYWNRLQKGEEIETEDGAHYTPDMVLG 246 Query: 183 ---------YCTDVNAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLK 225 YCTD P ESL +N D LI + + H + E+ + Sbjct: 247 AARKGIKVTYCTDTR--PTESLVASAKNSDLLICEGMYAEKEKIAKAKQYKHMTFYEAAE 304 Query: 226 KIELINPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH DY ++ DG Sbjct: 305 VAKKAEVAEMWLTHFSPSLVHAEDYMPQVREIFPNAFLGKDGKSVEL 351 >gi|150016551|ref|YP_001308805.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149903016|gb|ABR33849.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 315 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 24/212 (11%) Query: 52 SNTTVIVDTGPDFYMQV--LRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + L+ V +ID + THPH DHI +D + LK Sbjct: 70 DGKNILIDAGTSDKKALDYLKSIGVTTIDYAIATHPHEDHIGSMDDVIN-NLKVGTF--- 125 Query: 109 YAAPDCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 YA ++F AL ++ P + + I + + + ++ + Sbjct: 126 YAPK--ATTTTKTFENMVDALKNKNLKMNVPKVGDQITVGDATLTFLAPNSAKYED---- 179 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 L + + L + + + D + + + LD D LK G H SH S +++ Sbjct: 180 LNNYSIVCKLKYGNNSFIFMGDAEDVSEGEILQ-KQLDI-QADVLKVGHHGSHSSTTQA- 236 Query: 225 KKIELINPKNAILT---HMHVDLDYDMVLKST 253 ++ +NPK A+++ ++ L Sbjct: 237 -FLDKVNPKYAVISCEKGNDYGHPHEETLDKL 267 >gi|290968985|ref|ZP_06560520.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290780941|gb|EFD93534.1| metallo-beta-lactamase domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 313 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 32/168 (19%) Query: 50 RGSNTTVIVDTGPDFY---MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R NT +++D G + R + IDAV TH H DH+ G+ L +K Sbjct: 63 RCGNTRILIDAGISCRRVETGLRRYGCTLADIDAVFLTHEHQDHVSGLR-----TLLKKS 117 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY + + + + + +N +P+ ++ G ++ +P Sbjct: 118 QMPVYTTRETWQAIGNA------------------VVGHQNRFMPVMRRTQVGEMQIVPF 159 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +G+ V TD+ L+ D I++A Sbjct: 160 AISHDAARPVGYSVYHEQVKVTLATDLGKITPAVLQAAAYSDIFILEA 207 >gi|300770117|ref|ZP_07079996.1| ribonuclease Z [Sphingobacterium spiritivorum ATCC 33861] gi|300762593|gb|EFK59410.1| ribonuclease Z [Sphingobacterium spiritivorum ATCC 33861] Length = 303 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHA 86 P R SS ++ + ++D G MQ+ R + I + +H H Sbjct: 11 SSATPMYERHPSSQLLNF-----NEQFFLIDCGEGTQMQLFRYGIRSNRIGHIFISHLHG 65 Query: 87 DHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 DH G+ GL R + +Y + L FR+ D + Sbjct: 66 DHYLGLVGLLSSMHLVGRKSGLHLYGPAPLKEILDVQFRH-----SDTQLRYNLIFHPTN 120 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + +++A + P+ RI GFRF Sbjct: 121 PDKEEVILETAAFKVSTFPLTH---RIPCTGFRFD 152 >gi|197121211|ref|YP_002133162.1| beta-lactamase [Anaeromyxobacter sp. K] gi|196171060|gb|ACG72033.1| beta-lactamase domain protein [Anaeromyxobacter sp. K] Length = 288 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 34/211 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RP 105 T+ VD GP ++ L + +DA++ TH H DH + + Sbjct: 36 DGATIWVDPGPGALVRALSSRPKIDPAKVDALVITHRHLDHAGDATAVVEAMTRGGFSPR 95 Query: 106 IDVYAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + A D ++ FRY F A + P + + + A GV P Sbjct: 96 GTLLAPRDALETEPVVFRYAQAFPARVGQLAPGVRHAL-------------APGVTLETP 142 Query: 164 ILQQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---LH 214 + HG +S+ G R G+V ++A P +D L+++ + Sbjct: 143 VAHDHGVETYGYLLSAPGLRAGHVVDTFWMDALPEA----YAGVDLLLVNTTRLRGGDRR 198 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLD 245 H ++ + + + P+ A+LTH+ + L Sbjct: 199 YLHLGADDAERLVAAVRPRLAVLTHLGMQLP 229 >gi|238895792|ref|YP_002920528.1| ribonuclease Z [Klebsiella pneumoniae NTUH-K2044] gi|238548110|dbj|BAH64461.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 306 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 55/180 (30%), Gaps = 36/180 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 T LG S GVP RTR +S+ ++ + + D G Sbjct: 1 MELTFLGT--SAGVP----------------TRTRNMTSIILNLQQPTRAEM-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHL 118 Q L ++ + TH H DH+ G+ GL Q + +Y + + Sbjct: 42 GTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLPLTLYGPKGLKEFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P+ I + G + A P+ + G+R Sbjct: 102 --------ETALRLSGSWTDYPLTIIEVGPGLVFDEEGYRVTAYPLSHP---VECYGYRI 150 >gi|152971203|ref|YP_001336312.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166991105|sp|A6TBW1|RNZ_KLEP7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150956052|gb|ABR78082.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 306 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 55/180 (30%), Gaps = 36/180 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 T LG S GVP RTR +S+ ++ + + D G Sbjct: 1 MELTFLGT--SAGVP----------------TRTRNMTSIILNLQQPTRAEM-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHL 118 Q L ++ + TH H DH+ G+ GL Q + +Y + + Sbjct: 42 GTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLPLTLYGPKGLKEFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P+ I + G + A P+ + G+R Sbjct: 102 --------ETALRLSGSWTDYPLTIIEVGPGLVFDEEGYRVTAYPLSHP---VECYGYRI 150 >gi|229099889|ref|ZP_04230812.1| hypothetical protein bcere0020_51070 [Bacillus cereus Rock3-29] gi|229106049|ref|ZP_04236668.1| hypothetical protein bcere0019_51730 [Bacillus cereus Rock3-28] gi|229118952|ref|ZP_04248297.1| hypothetical protein bcere0017_52150 [Bacillus cereus Rock1-3] gi|228664477|gb|EEL19973.1| hypothetical protein bcere0017_52150 [Bacillus cereus Rock1-3] gi|228677368|gb|EEL31626.1| hypothetical protein bcere0019_51730 [Bacillus cereus Rock3-28] gi|228683504|gb|EEL37459.1| hypothetical protein bcere0020_51070 [Bacillus cereus Rock3-29] Length = 258 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 16 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 68 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 69 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 113 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 114 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 173 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 174 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 230 >gi|90415976|ref|ZP_01223909.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] gi|90332350|gb|EAS47547.1| Beta-lactamase-like [marine gamma proteobacterium HTCC2207] Length = 253 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 58/169 (34%), Gaps = 34/169 (20%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T ++VD G R ++ IDA+L TH H+DH G+ L F Sbjct: 18 EWRDTCLMVDCGFSIRDTTQRLAKLGKTPENIDAILVTHEHSDHWKGVVPLASKF----- 72 Query: 105 PIDVYAAPDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 IDVY CM+ S Y FK +D G + P Sbjct: 73 AIDVYVTAGCMRSRKASGRDYPFKVMDSH-------------------QAFQIGDLRVTP 113 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + H + F F + + TDV + D L+I+A Sbjct: 114 VPVPHDAREPVQFLFNSEQHQLGILTDVGSLTPHIETVYAKCDGLLIEA 162 >gi|91775194|ref|YP_544950.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91775338|ref|YP_545094.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709181|gb|ABE49109.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709325|gb|ABE49253.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|167042413|gb|ABZ07139.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine microorganism HF4000_ANIW133B20] Length = 257 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 29/168 (17%) Query: 50 RGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T +++D G + L Q I+ +L TH H DH G+ L + Sbjct: 18 EQDSTRLLLDCGFGLRDAIRRIARLGLQPEEINGILVTHEHDDHTGGVFKLA-----NRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I V+ + + + +I+++ + G ++ P Sbjct: 73 RIPVWLTYGTYITSQKLMPKELE----------FDLHIIDSHQ-----PFSIGNLQIQPY 117 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + F F + + TD L D L+++ Sbjct: 118 PVPHDAREPVQFTFEDGKHKLGVLTDAGTSTPHIEATLSACDALVLEC 165 >gi|29375772|ref|NP_814926.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227518451|ref|ZP_03948500.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227552981|ref|ZP_03983030.1| beta-lactamase [Enterococcus faecalis HH22] gi|229546125|ref|ZP_04434850.1| beta-lactamase [Enterococcus faecalis TX1322] gi|229550314|ref|ZP_04439039.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|255973086|ref|ZP_05423672.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255976125|ref|ZP_05426711.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256618780|ref|ZP_05475626.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256762200|ref|ZP_05502780.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256852845|ref|ZP_05558215.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256958689|ref|ZP_05562860.1| vicX protein [Enterococcus faecalis DS5] gi|256962213|ref|ZP_05566384.1| vicX protein [Enterococcus faecalis Merz96] gi|256965403|ref|ZP_05569574.1| MicC [Enterococcus faecalis HIP11704] gi|257077957|ref|ZP_05572318.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|257082846|ref|ZP_05577207.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|257085544|ref|ZP_05579905.1| vicX protein [Enterococcus faecalis Fly1] gi|257086550|ref|ZP_05580911.1| VicX protein [Enterococcus faecalis D6] gi|257089607|ref|ZP_05583968.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257415814|ref|ZP_05592808.1| vicX protein [Enterococcus faecalis AR01/DG] gi|257419023|ref|ZP_05596017.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257422892|ref|ZP_05599882.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|293383240|ref|ZP_06629156.1| VicX protein [Enterococcus faecalis R712] gi|293387605|ref|ZP_06632151.1| VicX protein [Enterococcus faecalis S613] gi|294781112|ref|ZP_06746462.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|300859771|ref|ZP_07105859.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|307268691|ref|ZP_07550060.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|307273516|ref|ZP_07554759.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|307274479|ref|ZP_07555662.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|307279015|ref|ZP_07560073.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|307288502|ref|ZP_07568488.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|307291180|ref|ZP_07571065.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|312899668|ref|ZP_07758992.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|312903947|ref|ZP_07763116.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|312907172|ref|ZP_07766163.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|312909791|ref|ZP_07768639.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|312951042|ref|ZP_07769950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|29343233|gb|AAO80996.1| metallo-beta-lactamase YycJ [Enterococcus faecalis V583] gi|227074129|gb|EEI12092.1| beta-lactamase [Enterococcus faecalis TX0104] gi|227177890|gb|EEI58862.1| beta-lactamase [Enterococcus faecalis HH22] gi|229304577|gb|EEN70573.1| beta-lactamase [Enterococcus faecalis ATCC 29200] gi|229308649|gb|EEN74636.1| beta-lactamase [Enterococcus faecalis TX1322] gi|255964104|gb|EET96580.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|255968997|gb|EET99619.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T2] gi|256598307|gb|EEU17483.1| vicX protein [Enterococcus faecalis ATCC 4200] gi|256683451|gb|EEU23146.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T3] gi|256711304|gb|EEU26342.1| metallo-beta-lactamase YycJ [Enterococcus faecalis T8] gi|256949185|gb|EEU65817.1| vicX protein [Enterococcus faecalis DS5] gi|256952709|gb|EEU69341.1| vicX protein [Enterococcus faecalis Merz96] gi|256955899|gb|EEU72531.1| MicC [Enterococcus faecalis HIP11704] gi|256985987|gb|EEU73289.1| metal-dependent hydrolase [Enterococcus faecalis JH1] gi|256990876|gb|EEU78178.1| metallo-beta-lactamase YycJ [Enterococcus faecalis E1Sol] gi|256993574|gb|EEU80876.1| vicX protein [Enterococcus faecalis Fly1] gi|256994580|gb|EEU81882.1| VicX protein [Enterococcus faecalis D6] gi|256998419|gb|EEU84939.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|257157642|gb|EEU87602.1| vicX protein [Enterococcus faecalis ARO1/DG] gi|257160851|gb|EEU90811.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257164716|gb|EEU94676.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|291079418|gb|EFE16782.1| VicX protein [Enterococcus faecalis R712] gi|291082937|gb|EFE19900.1| VicX protein [Enterococcus faecalis S613] gi|294451790|gb|EFG20242.1| metallo-beta-lactamase domain protein [Enterococcus faecalis PC1.1] gi|295112755|emb|CBL31392.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Enterococcus sp. 7L76] gi|300850589|gb|EFK78338.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TUSoD Ef11] gi|306497834|gb|EFM67366.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0411] gi|306500577|gb|EFM69908.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0109] gi|306504140|gb|EFM73352.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0860] gi|306508873|gb|EFM77960.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2134] gi|306509793|gb|EFM78820.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0855] gi|306515003|gb|EFM83549.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4248] gi|310626200|gb|EFQ09483.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 512] gi|310630997|gb|EFQ14280.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0102] gi|310632667|gb|EFQ15950.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0635] gi|311289749|gb|EFQ68305.1| metallo-beta-lactamase domain protein [Enterococcus faecalis DAPTO 516] gi|311293174|gb|EFQ71730.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0470] gi|315027750|gb|EFT39682.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2137] gi|315029158|gb|EFT41090.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4000] gi|315031525|gb|EFT43457.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0017] gi|315035059|gb|EFT46991.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0027] gi|315145508|gb|EFT89524.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX2141] gi|315147679|gb|EFT91695.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX4244] gi|315151381|gb|EFT95397.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0012] gi|315154079|gb|EFT98095.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0031] gi|315157366|gb|EFU01383.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0043] gi|315158429|gb|EFU02446.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0312] gi|315162571|gb|EFU06588.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0645] gi|315165414|gb|EFU09431.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1302] gi|315166592|gb|EFU10609.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1341] gi|315169879|gb|EFU13896.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1342] gi|315172770|gb|EFU16787.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1346] gi|315575744|gb|EFU87935.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309B] gi|315578296|gb|EFU90487.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0630] gi|315579812|gb|EFU92003.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX0309A] gi|323480430|gb|ADX79869.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] gi|327534822|gb|AEA93656.1| beta-lactamase [Enterococcus faecalis OG1RF] Length = 268 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 80/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + V+VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLFIET-----NQKKVLVDAGLSGKKITSLLAEVNRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I V + + + Sbjct: 73 ---VLARKYKLDVYANEKTWQAMD---------------PMIGKVDVAQKHIFEMGKVLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H I+ +RF TD ++N D +L+ Sbjct: 115 LGDMDIESFGVSHDAIAPQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENADAYLVESNHE 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 I+ L+ G + H S + +L +++ K L H+ + Sbjct: 175 IEILRAGPYPWSLKQRILGDKGHLSNDDGALVMADVLGDKTKRIYLGHLSKE 226 >gi|307704958|ref|ZP_07641846.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] gi|307621468|gb|EFO00517.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] Length = 269 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKFLVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAVAPQFYRFMKDDKSFVLLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|167586778|ref|ZP_02379166.1| beta-lactamase domain protein [Burkholderia ubonensis Bu] Length = 258 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEAASGATTTRVLLDCGFSAKEVERRLGRLHLGIDDLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + +E + + + Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVELHVLWGDETARI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + +P H L F F + TDV L D L+++ Sbjct: 111 RDLAVLPYTVPHDAREPLQFVFMDGCHRLGVLTDVGGATPHITAVLSGCDALVLE 165 >gi|293374559|ref|ZP_06620879.1| ribonuclease Z [Turicibacter sanguinis PC909] gi|325843491|ref|ZP_08168001.1| ribonuclease Z [Turicibacter sp. HGF1] gi|292646825|gb|EFF64815.1| ribonuclease Z [Turicibacter sanguinis PC909] gi|325489310|gb|EGC91686.1| ribonuclease Z [Turicibacter sp. HGF1] Length = 303 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 88/300 (29%), Gaps = 96/300 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G G+P R S+ I+ + +++D G Sbjct: 2 LDVTLLGTG--GGMPLPG--------------RYLSATLITYRGNK-----ILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 + + + SID + TH H DHI G+ GL G R P+ + + + Sbjct: 41 QVSMREINSGFKSIDMICITHIHGDHIIGLPGLLGTIGNSGRVNPLLILGPEGISEAVS- 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---- 176 A Y P VIEN ++ G I + H +G+ Sbjct: 100 ------AARVIAKYLPY-EINVIENPQQ--EIELYKGEIVIKTLELDHSS-PCIGYQLYV 149 Query: 177 ----RFG--------------------------------------------NVAYCTDVN 188 +F V+ TD Sbjct: 150 KRRPKFDLEKALSNKVPKDIWNQLQKSDEPIFYEEREYYPHLVLGEVRKGIKVSLVTDTR 209 Query: 189 AFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E + ++ D I + ++ + + H + E+ + N K+ +LTH Sbjct: 210 PI-LEIIPFIEGSDLFICEGTYAFDEEIEKAIKNKHMTFKEAATLAKKGNVKSLLLTHFG 268 >gi|312139207|ref|YP_004006543.1| hypothetical protein REQ_17890 [Rhodococcus equi 103S] gi|311888546|emb|CBH47858.1| conserved hypothetical protein [Rhodococcus equi 103S] Length = 252 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 78/251 (31%), Gaps = 46/251 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S+ P S + V++D GP Sbjct: 1 MRITVLGCSGSVSGPD--------------------SAASGYLLTAPGTPPVVMDFGPGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHL 118 + + +L +H HADH + GL ++ P VY D + Sbjct: 41 LGALQKHADPGEATILLSHLHADHCLDMPGL--LVWRRYHPTPPSGRALVYGPTDSACRI 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + C LDD + I+ + G I H S GFR Sbjct: 99 GVASAECGGELDDIS-------DTIDLRSWSDGHVAEIGEIAVQAFRVNHPP-ESYGFRV 150 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIEL 229 + +AY D ++ ++ D L+ +A + H S +E+ + Sbjct: 151 TSKAGRVLAYTGDT-GMCDAVVDLARDADVLLSEASWTHGPDRPEGIHLSGTEAGRVAAR 209 Query: 230 INPKNAILTHM 240 +LTH+ Sbjct: 210 AGVGELLLTHI 220 >gi|293365510|ref|ZP_06612219.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307703468|ref|ZP_07640410.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|291315878|gb|EFE56322.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307622875|gb|EFO01870.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] Length = 269 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 81/236 (34%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + ++ Y V+ + + + G I+ Sbjct: 80 DLYANEKTWQAM-----------ENSKYLGKVDSS--QKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGIVENADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 RLKQRILSDLGHLSNEDGAEAMIRTMGNRTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|283131432|dbj|BAI63433.1| metal-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis] Length = 259 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y + D + + P V E + G Sbjct: 81 KHLWEPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGKAYDVTGFERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|213969681|ref|ZP_03397816.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] gi|301384797|ref|ZP_07233215.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato Max13] gi|302060717|ref|ZP_07252258.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato K40] gi|302131945|ref|ZP_07257935.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925489|gb|EEB59049.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato T1] Length = 252 Score = 62.1 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F N TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSNGTRRFGLLTDLGSYCSNILQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|254251997|ref|ZP_04945315.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Burkholderia dolosa AUO158] gi|124894606|gb|EAY68486.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Burkholderia dolosa AUO158] Length = 258 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G D + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVDRRLGRLNLGIDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + I+ + + A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADDADIDLHVLWGDETVAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + +P H L F F + TDV L D L+++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITSVLSGCDALVLE 165 >gi|292490002|ref|YP_003532894.1| ribonuclease Z [Erwinia amylovora CFBP1430] gi|292901024|ref|YP_003540393.1| ribonuclease Z [Erwinia amylovora ATCC 49946] gi|291200872|emb|CBJ48007.1| ribonuclease Z [Erwinia amylovora ATCC 49946] gi|291555441|emb|CBA23898.1| ribonuclease Z [Erwinia amylovora CFBP1430] gi|312174192|emb|CBX82445.1| ribonuclease Z [Erwinia amylovora ATCC BAA-2158] Length = 304 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 100/319 (31%), Gaps = 82/319 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG GA G P R +S+ + R N T + D G Sbjct: 1 MHLQFLGTGA--GTPS--------------RERNVTSIALDLQGVR--NATWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP-------- 112 Q+L + I+ + TH H DHI G+ GL P+ +Y P Sbjct: 43 QHQILCTPIKPGRIEKIFITHLHGDHIFGLPGLLTSRSMNGCVEPMTLYGPPGIKTFVET 102 Query: 113 ----------DCMKHLFESFRYCFKALDDR------TYPPIVNPIVIENNDVPICMKSAG 156 ++ + F+ R T+P I+ +D P + + Sbjct: 103 SLSLSGSWLTFPLEIIEIGAGEVFQDAQFRVTAYPLTHPVECYGYRIDEHDKPGALDAPK 162 Query: 157 GVIEAIP-----ILQQHGRISSL------------GFRFG--NVAYCTDVNAFPAESLEK 197 IP + GR +L G + ++A D A ++E Sbjct: 163 LAAHGIPAGPYFYDLKQGRSVTLADGRVINGWDYVGGKIKGRSLAIFGDTAP-TAAAVEL 221 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH-----MHVDLDY 246 +D ++ +A + H S ++ + + K I+TH +H DY Sbjct: 222 ASEVDVIVHEATLEVAMEEKANGRGHSSTVQAARVAQQSGAKKLIITHLSSRYLHH--DY 279 Query: 247 DMVLKSTP---SRVVPAFD 262 + +L A D Sbjct: 280 ERLLAECRAVFPHTEMAHD 298 >gi|311693754|gb|ADP96627.1| ribonuclease Z [marine bacterium HP15] Length = 323 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 83/299 (27%), Gaps = 89/299 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG S G P T +N + L +S + ++D G Sbjct: 1 MEFTFLGT--SAGTP-----------TKSRNV---TGLALSHGGPKH---WYLIDCGEGT 41 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q+LR V+ + A+ TH H DH G+ GL R +Y ++F Sbjct: 42 QHQLLRTHHSVMQLQAIFITHIHGDHTFGLPGLLTSASMLGRTAPLYL---VAPRPVKTF 98 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 D + ++ + + A+P+ R+S F F Sbjct: 99 IEAAIGNSDSSLS--FELRFFDSEAENFHWEDDSLSVTAVPLSH---RVSCRAFVFTEKN 153 Query: 179 ----------------------------------GNVAYCTDVNAF-------------- 190 G +A C D Sbjct: 154 LERQLVRDRLEADGIEAGPAWGRLQQGDDVVLEDGRLARCDDYTRIARKPRKVIVAGDND 213 Query: 191 -PAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P L + +I +A + G H S ++ + E N +LTH Sbjct: 214 QPDLLLAACTGVQVVIHEATYTQEVSDRVGPWPQHSSAAQVARFAEAAGVPNLVLTHFS 272 >gi|329576536|gb|EGG58043.1| metallo-beta-lactamase domain protein [Enterococcus faecalis TX1467] Length = 268 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 80/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + V+VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLFIET-----NQKKVLVDAGLSGKKITSLLAEVNRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I V + + + Sbjct: 73 ---VLARKYKLDVYANEKTWQAMD---------------PMIGKVDVAQKHIFEMGKVLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H I+ +RF TD ++N D +L+ Sbjct: 115 LGDMDIESFGVSHDAIAPQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENADAYLVESNHE 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 I+ L+ G + H S + +L +++ K L H+ + Sbjct: 175 IEILRAGPYPWSLKQRILGDKGHLSNDDGALVMADVLGDKTKRIYLGHLSKE 226 >gi|229164412|ref|ZP_04292341.1| hypothetical protein bcere0009_51700 [Bacillus cereus R309803] gi|228619062|gb|EEK75959.1| hypothetical protein bcere0009_51700 [Bacillus cereus R309803] Length = 249 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|188026419|ref|ZP_02962021.2| hypothetical protein PROSTU_04109 [Providencia stuartii ATCC 25827] gi|188020017|gb|EDU58057.1| hypothetical protein PROSTU_04109 [Providencia stuartii ATCC 25827] Length = 309 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 59/186 (31%), Gaps = 43/186 (23%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T LG S GVP R +S+ ++ R T + D G Sbjct: 4 EKMELTFLGT--SAGVPT--------------KERNVTSMLLNLTGIR--KTYWMFDCGE 45 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYAA----PD 113 ++L + I+ + TH H DHI G+ GL P+ +Y Sbjct: 46 GTQHRILNSVFKAPRIEKIFITHLHGDHIFGLPGLLC-SRSMGGSTDPLTLYGPKGLKQY 104 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L S Y TYP + I IE + G + H R+ Sbjct: 105 VETVLTLSSSYM-------TYP--LEMIEIEPGQL-----FDDGELIVTAYPLDH-RVEC 149 Query: 174 LGFRFG 179 G+R Sbjct: 150 YGYRIE 155 >gi|148269208|ref|YP_001243668.1| ribonuclease Z [Thermotoga petrophila RKU-1] gi|281411506|ref|YP_003345585.1| ribonuclease Z [Thermotoga naphthophila RKU-10] gi|147734752|gb|ABQ46092.1| RNAse Z [Thermotoga petrophila RKU-1] gi|281372609|gb|ADA66171.1| ribonuclease Z [Thermotoga naphthophila RKU-10] Length = 280 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 59/236 (25%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G +L +V + V TH H DHI G+ ++ +++P+DV Sbjct: 21 RILFDAGEGV-STILGSKVYAFKYVFLTHGHVDHIAGL--WGVVNIRNNGMGDREKPLDV 77 Query: 109 Y---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + ++ F + N ++ + + G P Sbjct: 78 FYPRGNRAVEEYTE------FIKRANPDLRFSFNVHPLKEGEKVFLRDAGGFKRYVQPFR 131 Query: 166 QQH-GRISSLGFRFGNVA------------------------------YCTDVNAFPAES 194 +H S G+ V Y V +S Sbjct: 132 TKHVSSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDS 191 Query: 195 L----EKLQNLDFLI-----IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L E+++ + LI +DA ++ + +H ++ E ++ ++ K IL H+ Sbjct: 192 LALDPEEIRGTELLIHECTFLDA-RDRRYKNHAAIDEVMESVKAAGVKKVILYHIS 246 >gi|6687474|emb|CAB64977.1| YycJ protein [Enterococcus faecalis] Length = 249 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 80/232 (34%), Gaps = 54/232 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 SL I + V+VD G +L E + +DA+L TH H DHIHG+ Sbjct: 20 SLFIET-----NQKKVLVDAGLSGKKITSLLAEVNRKPEDLDAILVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +DVYA + + P I V + + + Sbjct: 73 ---VLARKYKLDVYANEKTWQAMD---------------PMIGKVDVAQKHIFEMGKVLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H I+ +RF TD ++N D +L+ Sbjct: 115 LGDMDIESFGVSHDAIAPQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENADAYLVESNHE 174 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 I+ L+ G + H S + +L +++ K L H+ + Sbjct: 175 IEILRAGPYPWSLKQRILGDKGHLSNDDGALVMADVLGDKTKRIYLGHLSKE 226 >gi|300312571|ref|YP_003776663.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300075356|gb|ADJ64755.1| metal-dependent hydrolases of the beta-lactamase superfamily I protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 88/257 (34%), Gaps = 59/257 (22%) Query: 42 LKISRVSER---GSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGID 93 L IS + S TTV++D G ++LR + + A++ TH H+DH+ G+ Sbjct: 15 LLISAAAGDQRPSSGTTVMLDCGFTLREAERRMLRLGLDPSDVSAIVVTHEHSDHVSGV- 73 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + ++ I V+ + + + + ++ K Sbjct: 74 ----FKFARRYRIPVWLSYGTWQAVAD------------------QATDVDVQFCADGQK 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 A G +E P H + + G+ + TD A ++ L D L+++ Sbjct: 112 LAIGDLELSPYTVPHDAREPIQYVAGDGDRRLGVLTDAGQPTAHLVQALGACDALLLECN 171 Query: 209 -----LKNGLHSS-----------HFSLS---ESLKKIELINPKNAILTHMHVDLDYDMV 249 L + + H + E L+ ++ K I H+ + + Sbjct: 172 HDRDMLDRSPYPAFLKRRIGGDYGHLANDASAEILRMLDKSRLKRVIGAHLSQQNNTPEL 231 Query: 250 LKSTPSRVVPAFDGMQF 266 ++ V+ GM F Sbjct: 232 ARAALEGVL----GMTF 244 >gi|81428654|ref|YP_395654.1| ribonuclease Z (RNAse Z) [Lactobacillus sakei subsp. sakei 23K] gi|123564205|sp|Q38WT6|RNZ_LACSS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|78610296|emb|CAI55345.1| Ribonuclease Z (RNAse Z) [Lactobacillus sakei subsp. sakei 23K] Length = 312 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N +S+ + + ER N + D G Sbjct: 1 MELEFLGTGA--GVP-----------ARQRNV---TSIALKLLDER--NEVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + TH H DH+ G+ G R + P+ +Y +++ Sbjct: 43 QHQILKTTLKPRKVKKIFLTHLHGDHLFGLPGFLSSRSFQ-GGDEPLTIYGPKGTEEYVR 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + L + + +V+ N V I K H RI+S GFR Sbjct: 102 TSLK-----LSESHLTYALKFVVLPENGVIIDDK----TFRVECAKLDH-RIASYGFRI 150 >gi|108802875|ref|YP_642812.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108764118|gb|ABG03000.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 813 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 26/176 (14%) Query: 50 RGSNTTVIVDTG--PDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +T V+VD G PD Q+ E++ +D + TH H DH + +K Sbjct: 411 DFGSTRVLVDAGIKPDGRGQLAPDFEEIGPLDGAIITHAHLDHCGAL----PLLVKNHPQ 466 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y P K + + ++ + VP G Sbjct: 467 LPIYCTPPSAKLIVSALNDHAAMGGGVPGGAPIHEVKKRLVSVPFGKPFEVGGATVTLTE 526 Query: 166 QQHGRISSLG-------------FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H LG F G++ D + P L ++ +D LI++A Sbjct: 527 SGH----ILGAASVLLRSSSAMVFHTGDIC-MEDHFSIPPARLPEVSGIDLLIMEA 577 >gi|327405262|ref|YP_004346100.1| Ribonuclease Z [Fluviicola taffensis DSM 16823] gi|327320770|gb|AEA45262.1| Ribonuclease Z [Fluviicola taffensis DSM 16823] Length = 303 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 33/180 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG GA+L P + R ++ +S ++ +++D G Sbjct: 2 NFEVTILGSGAAL----------------PTSNRNPTAQYVSC-----NDRHILIDCGEG 40 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLF 119 +Q+ + + I+ +L +H H DH G+ G R + +Y + + + Sbjct: 41 TQVQLRKYHVHIQKINHILISHLHGDHFFGLVGFLSSMHLLGRDKGLTIYGPEELEQIIR 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L+ + N + +IE H RI + GF Sbjct: 101 L-------QLEVGGARLGFELNFVALNGKENRLLFEDKIIEIWTFPLSH-RIPTNGFLIK 152 >gi|312862955|ref|ZP_07723195.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] gi|311101815|gb|EFQ60018.1| metallo-beta-lactamase domain protein [Streptococcus vestibularis F0396] Length = 270 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 26 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + + ++ G I+ Sbjct: 81 DIYANEKTW-QIMDSKNMLGKIENSQKHVFSRDKLL------------TFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 128 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L + + Sbjct: 188 STKQRILSDQGHLCNEDGADAMIRSIGNKTKKIYLGHLSKENNIKELAHMTMENQL 243 >gi|145355609|ref|XP_001422051.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582290|gb|ABP00345.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 447 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 87/268 (32%), Gaps = 52/268 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++ VP + S + G +++DTG Sbjct: 137 ELVFLGTGSA--VPA---------------KYRNVSGFSMQFGGEGYRGNIMLDTGEGSL 179 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP----IDVYA 110 Q++R E++ + V +H HADH G+ + R ++ I V Sbjct: 180 AQMIRRFGASAVDEKLREMRMVWISHIHADHHVGLPRILTARAEIFRRDGVEPPIIPVVG 239 Query: 111 AP---------DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ++ L F + D+ ++P V M S I A Sbjct: 240 PRALRRFLDYYEDLERLHCDFIDLSETTQDKWSSETMSPQVARLR--TALMGSDLDEIVA 297 Query: 162 IPILQ-QHGRISSL-GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGL 213 +P+ H + L G R + Y D P + ++ L+ +A + + Sbjct: 298 VPVHHCAHAYGAKLVGKRGWTMVYSGDTRPCP-SLVAAARDATLLVHEATFENGMEEEAV 356 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMH 241 H + E+++ ILTH Sbjct: 357 KKRHSTTKEAVQTGIDAGAYRTILTHFS 384 >gi|302024079|ref|ZP_07249290.1| metallo-beta-lactamase superfamily protein [Streptococcus suis 05HAS68] gi|330832447|ref|YP_004401272.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] gi|329306670|gb|AEB81086.1| metallo-beta-lactamase superfamily protein [Streptococcus suis ST3] Length = 267 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 54/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + IDA+L TH H+DHIHGI L +K + Sbjct: 25 DKKKILVDAGLSGKKVTSLLAEIDRKPEDIDAILVTHEHSDHIHGIG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + V + + + G ++ Sbjct: 80 DIYANELTWQAMESKLGKI---------------DVAQKHIFELGAMKTFGDLDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH-- 214 H +RF + TD + ++N D +LI I+ L++G + Sbjct: 125 SHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIESNHDIEILRSGSYSW 184 Query: 215 ---------SSHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H + + I + K L H+ +L + ++ Sbjct: 185 NLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 240 >gi|302879753|ref|YP_003848317.1| cyclic-AMP phosphodiesterase class-II [Gallionella capsiferriformans ES-2] gi|302582542|gb|ADL56553.1| cyclic-AMP phosphodiesterase class-II [Gallionella capsiferriformans ES-2] Length = 254 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 84/215 (39%), Gaps = 43/215 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S G I G+ +S I R +++D G Sbjct: 1 MRLKVLGC--SGG---IGGNLHT------------TSFLIDRD--------ILIDAGTGV 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 L+E + ID + TH H DHI + L + RP+ VYAA ++ L Sbjct: 36 GELSLKE-MSEIDHIFITHAHMDHICSLPLLMDSVGGMRARPVTVYAAQATLEMLQR--- 91 Query: 124 YCFK---ALDDRTYPPIVNPIV-IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F D P + +P++ + ++ + G I ++P + + ++G+ Sbjct: 92 HIFNWEIWPDFSEIPNVAHPVMRYQAMELGEVITLQGRKISSVPAVHA---VPAVGYHID 148 Query: 180 ----NVAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 ++ + D + A + ++ NL +LII+ Sbjct: 149 SGEASLVFSGDTCSNDALWRVVNQIANLRYLIIET 183 >gi|307566457|ref|ZP_07628891.1| ribonuclease Z [Prevotella amnii CRIS 21A-A] gi|307344845|gb|EFN90248.1| ribonuclease Z [Prevotella amnii CRIS 21A-A] Length = 304 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 33/180 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P I + SS I N ++D G Sbjct: 2 ENFKIHILGCGSAL--PTI--------------KHASSSQVIEL-----RNKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 Q+ + + I A+ +H H DH GI G+ F R P+ +YA + L Sbjct: 41 GTQTQLRKHHIPFSRIQAIFISHLHGDHCFGIPGIISTFGLTGRTAPLHIYAPANYEAIL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ + + ++ + + + N + + IE IP+ RI GF F Sbjct: 101 QQTISFFCQNIEFK-----IIFHSLNTNIQKVIFEDRSLTIETIPLQH---RIECCGFLF 152 >gi|253700508|ref|YP_003021697.1| beta-lactamase [Geobacter sp. M21] gi|251775358|gb|ACT17939.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 257 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 38/179 (21%) Query: 55 TVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G + R ++D +L TH H DHI G+ ++ + V Sbjct: 23 RLLIDAGLSGRETIARLSSIGVDAATLDGILITHEHTDHIRGVGATA-----RRLKLPVL 77 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + ++ V+ + E P K + P H Sbjct: 78 GSAHTLQAARH-------------VIGRVDYVEFEPG-TPFVFKG----VSIDPFPVTHD 119 Query: 170 RISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSSHF 218 +G+R G + + TD+ + +KL+ L+++ L++G + H Sbjct: 120 ACDPVGYRIESGEGGIGFATDLGIATRLTHDKLKGCRALVLEFNHDERMLQDGPYPWHL 178 >gi|162147065|ref|YP_001601526.1| pyrroloquinoline quinone biosynthesis protein PqqB [Gluconacetobacter diazotrophicus PAl 5] gi|209544127|ref|YP_002276356.1| pyrroloquinoline quinone biosynthesis protein PqqB [Gluconacetobacter diazotrophicus PAl 5] gi|189037405|sp|A9HEC4|PQQB_GLUDA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|161785642|emb|CAP55213.1| Coenzyme PQQ synthesis protein B [Gluconacetobacter diazotrophicus PAl 5] gi|209531804|gb|ACI51741.1| coenzyme PQQ biosynthesis protein B [Gluconacetobacter diazotrophicus PAl 5] Length = 307 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 106/323 (32%), Gaps = 80/323 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + AC + RT++S+ +S +V+ P Sbjct: 4 LIVLGAAAGGGFPQWNSNAPACRRARADDPAAPSRTQASIAVSGDGAHW----FVVNASP 59 Query: 63 DFYMQV-------LREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ R + S I V+ T D + G+ L++++P + A P Sbjct: 60 DLRAQIGQTPALHPRHGLRSTPIAGVILTGGEVDTVTGL-----LTLRERQPFTLLATPP 114 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQHGR 170 + L + F+ALD P V D P + G + P G+ Sbjct: 115 VLDLLDANP--IFEALDRSIVP-----RVPLALDQPFALALPDGTPAGLTITPFAVP-GK 166 Query: 171 IS-------------SLGFRFG-------NVAY-CTDVNAFPAESLEKLQNLDFLIIDA- 208 + G G AY +L+ D + D Sbjct: 167 VPLYAESGPDPAAIVENGETIGLAMTDGVRHAYFIPGCARMTGPLRARLRGADLVFFDGT 226 Query: 209 -------LKNGLHSS------HFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 L+ G+ H S+S ++ ++ + +L H++ ++L Sbjct: 227 LWTDDEMLRAGVGQKTGQRMGHMSVSGDGGTIDAFADLDVRRKVLIHINNSNP--LLLAD 284 Query: 253 TPS-------RVVPAFDGMQFSS 268 +P +FDGM+ ++ Sbjct: 285 SPERQVAHQAGWEVSFDGMRITT 307 >gi|330968862|gb|EGH68928.1| Beta-lactamase-like protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 252 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEIAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAANLVSELGWQDLQHLVLAHLS 213 >gi|329725436|gb|EGG61919.1| ribonuclease Z [Staphylococcus epidermidis VCU144] Length = 306 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 97/310 (31%), Gaps = 96/310 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + ID + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S L + I ++ + + HG I S G+R Sbjct: 103 TSL-----QLSESHL-----NYTITYIEINQQLAYHHNGFTVQAEMLNHG-IPSFGYRIE 151 Query: 180 ------------------------------------NVAYCTD----------VNAFPAE 193 + Y +D + + + Sbjct: 152 APITPGTINVEALRGIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 194 S------LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + E +N D +I +A L N H SH + + I+ N +++TH Sbjct: 212 TKPCENEYELAKNSDLMIHEATYIEGDKKLANNYHHSH--IDDVFNLIKQANVNKSLITH 269 Query: 240 MHVDLDYDMV 249 + + D V Sbjct: 270 ISNRYNIDEV 279 >gi|326385029|ref|ZP_08206701.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196243|gb|EGD53445.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 247 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 29/211 (13%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + + + V++D G + ++ + + AVL +H HADH + ++ P Sbjct: 11 YLVQADGHQPVLIDCGHGVFGELQQHADPNRVAVLLSHLHADHCMDLP--AMLVWRRWAP 68 Query: 106 ID------VYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y + Y + D + + E ++ Sbjct: 69 TPATERSLLYGPAGTAVRVGAGASEYPGEVDDLSDTYDVREWVDREPVEI--------HG 120 Query: 159 IEAIPILQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + P H S+ G R + Y D E ++ ++ D + +A Sbjct: 121 LHIEPFKVNHPP-STFGLRITGPDGEVLVYSGDT-GICDEVVDLARDSDLFLCEASWTHE 178 Query: 214 HSS-----HFSLSESLKKIELINPKNAILTH 239 H S E+ + ++ LTH Sbjct: 179 PGVRPEGLHLSGVEAGQVAHRAKVRSLALTH 209 >gi|227828368|ref|YP_002830148.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|227831125|ref|YP_002832905.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|229580010|ref|YP_002838410.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229581329|ref|YP_002839728.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|229585598|ref|YP_002844100.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238620561|ref|YP_002915387.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|227457573|gb|ACP36260.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|227460164|gb|ACP38850.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] gi|228010726|gb|ACP46488.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228012045|gb|ACP47806.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|228020648|gb|ACP56055.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238381631|gb|ACR42719.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|323475443|gb|ADX86049.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A] gi|323478164|gb|ADX83402.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4] Length = 228 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 105/275 (38%), Gaps = 58/275 (21%) Query: 5 YHFTILGCG--ASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T +G G +SLG+ +R +SS+ I N V++D GP Sbjct: 1 MKITFIGTGAGSSLGL-----------------KRVKSSILI--------NDKVLLDLGP 35 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLF 119 +++ A+ TH H DH +G+ ++ R I +Y+ ++ L Sbjct: 36 GAELRLEDMS-THPKALFITHLHVDHFNGVFD--YLVQRKIRQIPDLEIYSTKGFLEVL- 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +Y + N I + + + + +E I H I ++ + Sbjct: 92 ------------NSYIRVGNNISAKVYESDLP-RGKIDDMEIYSIQACHS-IYAVSYIIS 137 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIID--ALKNGLHSSHFSLSESLKKIELINPK 233 + V Y D LE ++++D +I + + + H S+ + + K Sbjct: 138 DGNTKVLYTGDTKEPCNTILENVKDVDLIIHETTCMNDCSAWGHTSIKQIFELFSN---K 194 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 I TH+ V+++ + ++ ++++ A DG+ + Sbjct: 195 RIIATHIPVEIE-EKIISFANNKIIIASDGLSLNV 228 >gi|123444417|ref|XP_001310979.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121892771|gb|EAX98049.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 361 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 86/289 (29%), Gaps = 58/289 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + T LG G P R S+ + +I+D G Sbjct: 97 TKTFALTFLGSG----------------SKFPTRTRNVQSVLVHC-----KEGYMILDCG 135 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAP 112 + Q+ R + ++ V +H H+DH G+ + LK R + V Sbjct: 136 VNSVGQMRRLFGVEGTNHILKNLFCVWISHFHSDHSLGLAVIMEERLKVTDRRLTVLCDH 195 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---G 169 P+ + + G I+ H G Sbjct: 196 ITHGRTIVK-------------EPLYGEDYFKADFKNRNDVFKYGNIQLRSTPVHHDFRG 242 Query: 170 RISSLGFRFG---NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLH--SSH 217 + F + D NAF + ++ ++ D LI +A + H H Sbjct: 243 TSMACEITFDSKYKLVMSGDRNAFYEDMEKEFKSTDILIHEATFKDDSNAEEEDHCDRVH 302 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 + SE+++ + +N K L H D + V+ A+D + Sbjct: 303 STFSEAVESGKKLNAKFEFLNHCSQRYDLNEFCLPKHPNVMFAYDYLTI 351 >gi|299783056|gb|ADJ41054.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Lactobacillus fermentum CECT 5716] Length = 310 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 82/292 (28%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + ER + + D G Sbjct: 1 MQIEFLGTGAGS----------------PSKQRNVSSLALRLLEERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------P 112 Q+L + ++ + TH H DHI G+ G R + P+ +Y Sbjct: 43 QHQILHTTIRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIYGPKGIKDFVQ 101 Query: 113 DCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQH 168 +K Y F L + + + S G +E A P Sbjct: 102 TALKVSESRLSYPLKFVELTGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMV 161 Query: 169 GRISSLGFRFGN---------------------------------VAYCTDVNAFPAESL 195 ++ G G VA D ++ Sbjct: 162 EKVRQAGIPSGPLYGQLKRGEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDT-RVTDNAV 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + D L+ +A + + H + ++ + + +L H+ Sbjct: 221 KLAKGADVLVHEATFAKNEQRLAHNYYHSTSXQAATVAKKAGAQRLLLNHIS 272 >gi|159899891|ref|YP_001546138.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892930|gb|ABX06010.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 255 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 85/231 (36%), Gaps = 24/231 (10%) Query: 56 VIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAA 111 V++D G Y ++L+ + + A+ +H H DH+ G+ L + + + V+ Sbjct: 32 VLLDCGGSPYRRMLKYGLDPRQLRAIFISHNHPDHLMGLPSLLLHLWLAQHNGELLVFGN 91 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + +A D + +++ + + G H R Sbjct: 92 SRTIATAEA----VVQAADLGIHAIKPQFQTLDDAGGKVELPFDLGA-TLTTAPTYHSR- 145 Query: 172 SSLGFRF-----GNVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESLK 225 +L R G++ Y D P +L +L + LI + + +H + ++ Sbjct: 146 PTLALRIDQTGQGSLVYGADSG--PCAALVELSDHAHTLIHECTVSTPFDTHSTPEQAAT 203 Query: 226 KIELINPKNAILTH---MHVDLDYDMVLK---STPSRVVPAFDGMQFSSPI 270 + + ILTH ++ + +++ + V+ A+DG F+ Sbjct: 204 TAQNAGVQRLILTHYSPINTAPEAEVLARVATIFKGEVLIAYDGAVFALDA 254 >gi|88859135|ref|ZP_01133776.1| hypothetical protein PTD2_09024 [Pseudoalteromonas tunicata D2] gi|88819361|gb|EAR29175.1| hypothetical protein PTD2_09024 [Pseudoalteromonas tunicata D2] Length = 273 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 85/259 (32%), Gaps = 50/259 (19%) Query: 5 YHFTILGCGASLGVP----RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 T G S+ P I G AC + + +N +I+D+ Sbjct: 1 MKVTFYGTRGSIPTPGPNTVIYGGNTAC-------------VLLEA-----NNKKLILDS 42 Query: 61 GPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-AAPDCM--K 116 G + R + +L +H H DHI G + R I +Y A + M K Sbjct: 43 GTGIRLLGERLAKETDSIHILLSHNHWDHIQGFPFFVP-AYQANRTIHIYSAPTEPMQPK 101 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + E F + ++ + + + E I H + Sbjct: 102 AILEQMERSFFPVPPSKLSAKIHVHSLTEEVANLNIVG----FEIITKAINHPNGG-FAY 156 Query: 177 RF----GNVAYCTDVNAFPAESL--------EKLQNLDFLIIDA------LKNGLHSSHF 218 + +AY TD + ++L L ++D LI DA + + L H Sbjct: 157 KISCDNKTIAYVTDNELYSKDNLKTSLSQWHAFLADVDLLIHDAQYTDSEMPSKLGWGHS 216 Query: 219 SLSESLKKIELINPKNAIL 237 S+++++ + K IL Sbjct: 217 SIAQAITLGQTAKVKQLIL 235 >gi|199598034|ref|ZP_03211458.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] gi|199591124|gb|EDY99206.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] Length = 245 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 44/242 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DH + L+ ++ +K Sbjct: 25 ESGDYHLLMDLGSGGLLALEKVFDPLQLDAVLLTHYHHDHTADVGVLQYFYQLRKGNKKV 84 Query: 105 -PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y D + +F F T ++ G + Sbjct: 85 SPLPIYGHTKDPLNFGSLTFG-PFTQGIGYTGDSTLHL----------------GPLTLT 127 Query: 163 PILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLH 214 + QH + + R + +D F + ++ D L+ D L + Sbjct: 128 FLETQH-PVPAFAVRIKEEGTNKVLVNTSDTRYFSGLA-PFAKHADLLMADTNFLADQPA 185 Query: 215 SS-HFSLSESLKKIELINPKNAILTHMHVDLD-------YDMVLKSTPSRVVPAFDGMQF 266 H + E+ + K +LTH+ LD V P + A D + Sbjct: 186 PRWHLTAPEAGTLAKEAQVKRLLLTHLPQQLDLVTLKDQAQAVAGGIP--IDVARDDLTI 243 Query: 267 SS 268 + Sbjct: 244 NV 245 >gi|152981637|ref|YP_001352974.1| metallo-beta-lactamase superfamily protein [Janthinobacterium sp. Marseille] gi|151281714|gb|ABR90124.1| metallo-beta-lactamase superfamily protein [Janthinobacterium sp. Marseille] Length = 259 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 42/181 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIHGID 93 + + TT+++D G +Q+L + ++ TH H DH+ G+ Sbjct: 14 ALLISTQSGSTRTTLMLDCGFGIKETERRLARLQMLP---TDLSGIIVTHEHQDHVGGV- 69 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + ++ + V+ + + + V +N+ + Sbjct: 70 ----FKFARRHKLPVWLTYGTYQAVHDKCD-------------GVQLHFCRDNE-----R 107 Query: 154 SAGGVIEAIPILQQHG------RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 A G +E +P H ++S G R + TD A + L D L+++ Sbjct: 108 FAIGDLELLPYTVPHDAREPVQYVASDGTR--RLGVLTDAGHGTAHMVAALGGCDALMLE 165 Query: 208 A 208 Sbjct: 166 C 166 >gi|119486346|ref|ZP_01620405.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] gi|119456559|gb|EAW37689.1| Beta-lactamase-like protein [Lyngbya sp. PCC 8106] Length = 302 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 86/267 (32%), Gaps = 66/267 (24%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V R +I D G +L+E L + + ++H H DHI G +F+ Sbjct: 54 SCVEMRLGKKLLIFDAGTGLRVLGTNLLKEMPLDV-CMFFSHTHWDHIQGF----PFFIP 108 Query: 102 QKRPI---DVYA----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 PI +Y ++ + D +P P+ + +D+ Sbjct: 109 AFIPINRFHIYGAITPDGSTIEQ---------RLADQMVHPNFPVPMHVMQSDMKFYDII 159 Query: 155 AG-------GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQ 199 G IE P+ +G I G+R V YC+D FP L + Sbjct: 160 PGEIVSLEDIKIETAPLNYPNGAI---GYRVTWQGHTVVYCSDTEHFPDRLDENVLHLAR 216 Query: 200 NLDFLIIDALK----------NGLHSSHFSLSESLKKIELINPKNAILTHM-----HVDL 244 D LI DA + H + ++ + K + M D Sbjct: 217 GADVLIYDATYTNEEYYHLQSPKVGWGHSTWQVGVEVAKKAGVKKIV---MYQHDPSHDD 273 Query: 245 DY-----DMVLKSTPSRVVPAFDGMQF 266 D+ V P + A +GMQ Sbjct: 274 DFLDQVEADVQAVFPEGI-VAREGMQL 299 >gi|229014628|ref|ZP_04171742.1| hypothetical protein bmyco0001_50280 [Bacillus mycoides DSM 2048] gi|228746639|gb|EEL96528.1| hypothetical protein bmyco0001_50280 [Bacillus mycoides DSM 2048] Length = 249 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNYRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|323342379|ref|ZP_08082611.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463491|gb|EFY08685.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 244 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 63/225 (28%), Gaps = 64/225 (28%) Query: 46 RVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G + L +D VL TH H DH + + Sbjct: 16 CCLVESQGVRIMIDCGTTKRYLKQSFESLALTFDDVDCVLITHDHGDHTSQLKH---FAH 72 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 Q +Y + M F Y P G Sbjct: 73 HQ-----IYCPSEIM----------FNHTKVEPYTP-----------------FHVGPFI 100 Query: 161 AIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID--------- 207 + H S+G+ + + Y TD + E +++ D+ I++ Sbjct: 101 ITAVKTSHDADDSVGYIVDDGSRKLVYITDTGYIREQDFELIKDADYYILESNHDPELLM 160 Query: 208 ------ALKNG--LHSSHFSLSESLKKIELI---NPKNAILTHMH 241 A+K + H S E+ + + K +L H+ Sbjct: 161 QTNRPYAIKRRILSDTGHLSNEEAGVLLSKVVSEKTKEILLAHLS 205 >gi|239941578|ref|ZP_04693515.1| hypothetical protein SrosN15_11319 [Streptomyces roseosporus NRRL 15998] gi|239988042|ref|ZP_04708706.1| hypothetical protein SrosN1_12108 [Streptomyces roseosporus NRRL 11379] gi|291445022|ref|ZP_06584412.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291347969|gb|EFE74873.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 250 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 83/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSKGSAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCMK 116 ++ R + +DA+ +H HADH ID + ++ + RP+ VY + Sbjct: 40 LGELQRHVGLYDLDAIFLSHLHADHC--IDMCAYFVVRYYPHGGDRPRPLPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + DR + + +++ I G H + + G Sbjct: 98 RLTAAHG---DTPSDRAMGEVFDFHTLKSGSFEI------GPFSVRTEKLCH-PVDTFGI 147 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R ++AY D + +++D + +A K + H + E+ + Sbjct: 148 RVEHGGSSLAYSGDTGTC-EALEDLARDVDLFLCEASFVDGKEDIPDLHLNGREAGEAAA 206 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 207 RAGAHRLVLTHI 218 >gi|281357506|ref|ZP_06243994.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281316109|gb|EFB00135.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 261 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 100/291 (34%), Gaps = 68/291 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LG GA+ DW + + R +S + + +++D G Sbjct: 9 LNLKLLGTGAA------DYDW---NRFGEEGVRGSTSSLL--------DGHILIDCGITG 51 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFE 120 + R + +ID +L TH H DH + L RP VYA+ + + L Sbjct: 52 LRNLERFGISCAAIDTLLITHSHDDHF--LPEQIA-VLAAGRPTPLAVYASAEAVAEL-- 106 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----GRISSLGF 176 P + + + MK G + H + F Sbjct: 107 ------------GGIPGIAAFPLHSG-----MKFRLGETAVTALPANHLTNIPGEQAFHF 149 Query: 177 RF----GNVAYCTDVNAFPAESLEKLQNL--DFLIIDALKNGLHS----SHFSLSESLKK 226 F GN+ Y D +++ +++L D++++D H L+ ++ Sbjct: 150 CFETPAGNLLYALDGAWMLKQAVRLIEHLRFDWIVMDCTMADSGDFRIFEHTDLAMAVHM 209 Query: 227 IELIN------PK-NAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQF 266 IE + P+ IL H+ L + + K + AFDGM+ Sbjct: 210 IETLRNLNIVTPRTRIILDHLARTLWPATEEERRRKIAGTGFELAFDGMEL 260 >gi|282879545|ref|ZP_06288276.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] gi|281306493|gb|EFA98522.1| metallo-beta-lactamase domain protein [Prevotella timonensis CRIS 5C-B1] Length = 266 Score = 62.1 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 84/286 (29%), Gaps = 74/286 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F +G G+S N +++D G Sbjct: 2 LQFICMGSGSSG-----NCYC-----------------------LFTENDGLMIDAGLGV 33 Query: 65 YM--QVLREQVLSIDAVLYTHP---HADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 + +E LS+ + + HADHI + L F + VYA + Sbjct: 34 RTLKRSFKENGLSLSHIHHIIITHDHADHIKSVGSLSREF-----SLPVYATAKVHDGIE 88 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +F P + + G P H S+G+R Sbjct: 89 RNF------CVRNKVAPNLKRC------FTKQVPLQVGEFMVTPFHVPHDSCDSVGYRIS 136 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHF---------SL 220 TDV E E + ++L+I+A L G + +H L Sbjct: 137 CQGIIFVLMTDVGHITDEMKEIIAEANYLVIEANHDEDMLAQGPYPAHLKARIASQTGHL 196 Query: 221 SESL---KKIELINP--KNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 S E + ++ L H+ + ++ + + T +++ ++ Sbjct: 197 PNSECGRALAENMTAELRHVWLCHLSEENNHPELARKTVEQILRSY 242 >gi|331005417|ref|ZP_08328798.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] gi|330420777|gb|EGG95062.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC1989] Length = 272 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 53/215 (24%) Query: 56 VIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G + L +DA++ TH H DHI G+ L +K + VY Sbjct: 37 VLIDCGFTIKETERRLARLDLTPSHLDAIIVTHEHGDHIKGVGPLA-----RKYNLPVYI 91 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + + +I + P + P+ H Sbjct: 92 TAGTFRS--------------KKIGALDDVRLIHRYE-PFDIN----AFHITPVAVPHDA 132 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 F + TD+ Q+ D LI++A L + + Sbjct: 133 SEPAQFIIECDNKRLGILTDLGNISPHVEMHYQSCDALILEANHDPAMLASSAYPFSLKQ 192 Query: 216 ------SHFSLSES---LKKIELINPKNAILTHMH 241 H S ++ L+ ++ ++ ++ H+ Sbjct: 193 RVGGAWGHLSNQQAARFLESVDRQKLQHLVVAHIS 227 >gi|323128131|gb|ADX25428.1| hypothetical protein SDE12394_10060 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 259 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y + D + + P V E + G Sbjct: 81 KHLWEPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGKAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|304316628|ref|YP_003851773.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778130|gb|ADL68689.1| beta-lactamase superfamily hydrolase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 240 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 87/250 (34%), Gaps = 55/250 (22%) Query: 5 YHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G GV GAC S + ++ V+VD G Sbjct: 1 MKLTILGSHGPYPGV------DGAC-----------SGYLLE-----DNDLNVLVDCGSG 38 Query: 64 FYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------KRPIDVYAAPDCMK 116 + R + + ++ TH H+DH+ + LR K PI+V+ + K Sbjct: 39 VISRYQRFHDLRDLKYIILTHLHSDHMSDMLVLRYAVDIMMRKGYIKEPINVFCPSEPYK 98 Query: 117 HLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L E +F FK I+N D + + I + +S+ Sbjct: 99 VLEELNFNGVFK---------------IKNIDEDLKLNIGNLNITFKKVEHP---VSTFA 140 Query: 176 FRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELI 230 +F + + +D + +N D + D L NG H + ++ + + Sbjct: 141 VKFDDGQRTFVFSSDTVYC-DNLVSFAENSDLFLCDGNLLNGEKGPHLTARQAAEISKAA 199 Query: 231 NPKNAILTHM 240 K ++TH+ Sbjct: 200 FCKKLVITHL 209 >gi|220907791|ref|YP_002483102.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7425] gi|219864402|gb|ACL44741.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 7425] Length = 320 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 46/225 (20%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPP 136 + ++H H DHI G K+ +Y A K + + D +P Sbjct: 67 HLFFSHTHWDHIQGFPFFEP-AFKEGNCFHIYGAIDRGGKSIQQRLH------DQMLHPN 119 Query: 137 IVNPIVIENNDVPICMKSAGGV-------IEAIPILQQHGRISSLGFRFGN----VAYCT 185 P+ I ++ + G +E P+ G I G+R V+Y T Sbjct: 120 FPVPLQIMRGNLKFYDLAIGQSVLLDDVLVETAPLNHPGGSI---GYRVNWKGLAVSYIT 176 Query: 186 DVNAFP---AESLEKL-QNLDFLIIDA--LKNGLHS--------SHFSLSESLKKIELIN 231 D F E + L ++ D +I DA H+ H + E+ K Sbjct: 177 DTEHFSDRLDEQVLWLARSADIMIYDATYTDEEYHAVQGSKVGWGHSTWQEATKLARAAG 236 Query: 232 PKNAILTHMHVDLDY-----DMVLKSTP---SRVVPAFDGMQFSS 268 K IL H D D+ D V + + A +G+ Sbjct: 237 VKQLIL--FHHDPDHNDDFLDRVERQAKRAFANSFLAREGLVIQL 279 >gi|229020686|ref|ZP_04177415.1| hypothetical protein bcere0030_51610 [Bacillus cereus AH1273] gi|229026902|ref|ZP_04183226.1| hypothetical protein bcere0029_51670 [Bacillus cereus AH1272] gi|228734405|gb|EEL85075.1| hypothetical protein bcere0029_51670 [Bacillus cereus AH1272] gi|228740614|gb|EEL90883.1| hypothetical protein bcere0030_51610 [Bacillus cereus AH1273] Length = 249 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDISGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|154507588|ref|ZP_02043230.1| hypothetical protein ACTODO_00068 [Actinomyces odontolyticus ATCC 17982] gi|153797222|gb|EDN79642.1| hypothetical protein ACTODO_00068 [Actinomyces odontolyticus ATCC 17982] Length = 265 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 66/218 (30%), Gaps = 37/218 (16%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYAAPDCMKHLFESFRYCFKA 128 +DA++ +H HADH+ I L+ ++ P + +Y + M+ + + A Sbjct: 61 DLDALVLSHCHADHMGDIISLQ--VYRKWGPGAAASALPLYGPAETMRRVRQ----IEDA 114 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------- 179 D+ Y + + G + P H + + G R Sbjct: 115 PDNEAYEA-----EFVFTHMQLGEAYQVGPMTIRPYRALH-PVEAFGLRIEGPSEDDPER 168 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKN 234 ++ Y D +E + +D L+ + H + + Sbjct: 169 LVSLFYTGDT-DLCDTIIEGARGVDMLLSEVGFTSDETEPDMHMDGVRAGEVATRAGVAR 227 Query: 235 AILTHMHVDLDYDMVLKSTPSRVV----PAFDGMQFSS 268 I TH+ D V A GMQ S Sbjct: 228 MIATHIQPWTPRDRVASEVRQTWSGPLDFATSGMQVSL 265 >gi|223932687|ref|ZP_03624686.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|223898657|gb|EEF65019.1| beta-lactamase domain protein [Streptococcus suis 89/1591] Length = 267 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 54/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + IDA+L TH H+DHIHGI L +K + Sbjct: 25 DKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + V + + + G ++ Sbjct: 80 DIYANELTWQAMESKLGKI---------------DVAQKHIFELGAMKTFGDLDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH-- 214 H +RF + TD + ++N D +LI I+ L++G + Sbjct: 125 SHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIESNHDIEILRSGSYSW 184 Query: 215 ---------SSHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H + + I + K L H+ +L + ++ Sbjct: 185 NLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 240 >gi|22299524|ref|NP_682771.1| hypothetical protein tlr1981 [Thermosynechococcus elongatus BP-1] gi|22295707|dbj|BAC09533.1| tlr1981 [Thermosynechococcus elongatus BP-1] Length = 316 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 45/252 (17%) Query: 52 SNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +I+D G ++ +Q ++ + +TH H DHI G + F+ + Sbjct: 61 NGQRIILDGGTGLRVLGEHLMGQQPVTAH-LFFTHTHWDHIQGFPFFQPAFVP-GNQFHI 118 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE------AI 162 YA P E + D +P P+ I D+ G + Sbjct: 119 YAVPGKNGQGIER-----RLNDQMLHPNFPVPLQIMGGDLRFYDLEVGERVHLGDGVVVS 173 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDALKNGL- 213 H G+R +VAY TD P + + D +I DA Sbjct: 174 NEALNHPGGGV-GYRVSWQGIHVAYITDTEHLPDRLHPGAFALADHADVMIYDATYTDEE 232 Query: 214 --HS-------SHFSLSESLKKIELINPKNAILTHMHVDLDYD--------MVLKSTPSR 256 H H + E++K + K IL H D +D + ++ + Sbjct: 233 YYHPQQSKVGWGHSTWQEAVKLAQAAQVKQLIL--FHHDPSHDDDCLDRIGELARAQFPQ 290 Query: 257 VVPAFDGMQFSS 268 + A +G+ S Sbjct: 291 TLLAREGLIISV 302 >gi|320547233|ref|ZP_08041526.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320448121|gb|EFW88871.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 269 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 75/236 (31%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S +++D G + + + +DA+L TH H+DHI G+ L ++ + Sbjct: 25 SQKRLLIDAGLTGKKITSLLADIDRKPEDLDAILITHEHSDHIKGVG-----VLARRYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I + + G I+ Sbjct: 80 DVYANEKTWQMIDERNM-------------IGKLDTAQKHVFERGKVLTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L+ G + Sbjct: 127 SHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAGVIENADGYLIESNHDVEILRAGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I I K L H+ +L + + + Sbjct: 187 SLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMENNL 242 >gi|302669936|ref|YP_003829896.1| ribonuclease Z [Butyrivibrio proteoclasticus B316] gi|302394409|gb|ADL33314.1| ribonuclease Z [Butyrivibrio proteoclasticus B316] Length = 306 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 82/299 (27%), Gaps = 93/299 (31%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P R +SL + + V++D G + + Sbjct: 6 LLGTGGMMPLP----------------NRYLTSLMVRY-----NGKCVLIDCGEATQIAM 44 Query: 69 LREQVLS--IDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 ++ + S ID + +TH HADH+ G+ G+ ++ P+ + + + + R Sbjct: 45 KKKGLSSKPIDVICFTHFHADHVSGLPGMLLTMGNAERTEPLLIVGPKGV-ERIVNALRV 103 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-----RFG 179 L P + + ++ ++ G H I+ G+ R G Sbjct: 104 IAPEL-----PFEIKFKELTTDEETFEIEGMPG-FSVTAFKVNH-NITCYGYSMSLKRQG 156 Query: 180 NV-----------------------------------------------AYCTDVNAFPA 192 Y TD Sbjct: 157 KFNVEAAMAAGIDKRYWNGLQKGETYTLDDGRVITPDMVLGDARKGIKLTYTTDTRP-TD 215 Query: 193 ESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINPKNAILTHMHVDL 244 + D I + + H + E+ K K LTH L Sbjct: 216 SIVRNAAESDLFICEGMYGEPDKQAKAREYKHMTFYEAAKMARDAGVKEMWLTHYSPSL 274 >gi|284031347|ref|YP_003381278.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283810640|gb|ADB32479.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 238 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 62/174 (35%), Gaps = 25/174 (14%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADH---IHGIDGLRGYFLKQKRPID 107 V++D G Q+L+ +DAV+ TH H DH + + +R Y + PI Sbjct: 23 DGFKVVLDLGYAALPQLLKHCPDGEVDAVVVTHQHPDHCVDVSALARVRYYQARDAAPIP 82 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y P + L AL+ R P V + + G L Sbjct: 83 LYCPPGVLDVLR--------ALEPRPDPATVFAVR------DLADAGEIGPFRLETALLP 128 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSS 216 H I++LG R VAY D + D + DA L+ ++ Sbjct: 129 H-YITNLGVRLSAPGVTVAYTGD-SGPSDLLAGLAAGSDLFVADATLQGEPPAT 180 >gi|255026506|ref|ZP_05298492.1| hypothetical protein LmonocytFSL_09523 [Listeria monocytogenes FSL J2-003] Length = 105 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 22/118 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ +S ++ER NT + D G Sbjct: 1 MELVFLGTGA--GVPSRG--------------RNVTSIALSMLNER--NTIWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHL 118 Q++R Q+ ++ + TH H DHI G+ GL Q + +Y +++ Sbjct: 43 QHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYV 100 >gi|297582766|ref|YP_003698546.1| ribonuclease Z [Bacillus selenitireducens MLS10] gi|297141223|gb|ADH97980.1| ribonuclease Z [Bacillus selenitireducens MLS10] Length = 309 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA GVP + + + G ++D G Sbjct: 1 MELHMLGTGA--GVPT---------------KERNVTAMV-MKGVDGKKACWMIDCGEGT 42 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + + I V TH H DH++G+ G G F +P+ VY ++ + Sbjct: 43 QHQILHAPIKAGAITKVFITHLHGDHLYGLPGFLGSRSFQGADQPLTVYGPSGLRPYIEQ 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + TYP + +E ++ G + H R+ S G+RF Sbjct: 103 SLA---VSGTHLTYP--LTVHEVEEGEI-----VDDGNWRISCLALDH-RMPSFGYRFD 150 >gi|322412767|gb|EFY03675.1| hypothetical protein SDD27957_10460 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 259 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y + D + + P V E + G Sbjct: 81 KHLWEPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGKAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|292654323|ref|YP_003534220.1| ribonuclease Z [Haloferax volcanii DS2] gi|291370702|gb|ADE02929.1| ribonuclease Z [Haloferax volcanii DS2] Length = 315 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 101/324 (31%), Gaps = 81/324 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G + VP R S+ ++R ER ++ D G Sbjct: 1 MRATFLGTGGA--VPTTA--------------RAPSAFLVNRDGER-----LLFDCGEGT 39 Query: 65 YMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE- 120 Q++R + + TH H DHI GI GL F + + ++ P HL + Sbjct: 40 QRQMMRYGTGFGVSHLFVTHLHGDHILGIPGLIQTLDFNDRDDSLAIHGPPGSKGHLEQL 99 Query: 121 --------SFR-----------------YCFKALDDRTYPPIVNPIVIEN---------- 145 F Y +A D V ++E+ Sbjct: 100 VHAGGYQPGFHVSVHEVRPGNVAYRADDYEVRAFDTEHRTASVGYALVEDDRPGRFDREK 159 Query: 146 -NDVPICMKSAGGVIEA-IPILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEK 197 ++ + + A G + A + + G + G+ V Y D ++E Sbjct: 160 AEELGVPVGPAFGRLHAGEDVELEDGTVVRSEQVVGDPRPGRTVVYTGDTRPL-NSTVEV 218 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD---- 247 + D L+ DA + ++H + E+ + + + LTH+ D Sbjct: 219 ACDADLLVHDATFTDEEAERAKQTAHSTAREAARVARDADVRRFALTHISARYAADPSPL 278 Query: 248 -MVLKSTPSR-VVPAFDGMQFSSP 269 + A DG + P Sbjct: 279 LEQAREVYDGEAFVAEDGQKLEVP 302 >gi|227538570|ref|ZP_03968619.1| ribonuclease Z [Sphingobacterium spiritivorum ATCC 33300] gi|227241489|gb|EEI91504.1| ribonuclease Z [Sphingobacterium spiritivorum ATCC 33300] Length = 303 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHA 86 P R SS ++ + ++D G MQ+ R + I + +H H Sbjct: 11 SSATPMYERHPSSQLLNF-----NEQFFLIDCGEGTQMQLFRYGIRSNRIGHIFISHLHG 65 Query: 87 DHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 DH G+ GL R + +Y + L FR+ D + Sbjct: 66 DHYLGLVGLLSSMHLVGRKSDLHLYGPAPLKEILDVQFRH-----SDTQLRYNLIFHPTN 120 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + +++ + P+ RI GFRF Sbjct: 121 PDKEEVILETTAFKVSTFPLTH---RIPCTGFRFD 152 >gi|220915915|ref|YP_002491219.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953769|gb|ACL64153.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 288 Score = 62.1 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 34/211 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RP 105 T+ VD GP ++ L + +DA++ TH H DH + + Sbjct: 36 DGATIWVDPGPGALVRALSSRPKVDPAKVDALVITHRHLDHAGDATAVVEAMTRGGFSPR 95 Query: 106 IDVYAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + A D ++ FRY F A P + + + A GV P Sbjct: 96 GTLLAPRDALETEPVVFRYAQAFPARVGVLAPGVRHAL-------------APGVTLETP 142 Query: 164 ILQQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---LH 214 + HG +S+ G R G+V ++A P +D L+++ + Sbjct: 143 VAHDHGVETYGYLLSAPGLRAGHVVDTFWMDALPEA----YAGVDLLLVNTTRLRGGDRR 198 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLD 245 H ++ + + + P+ A+LTH+ + L Sbjct: 199 YLHLGADDAERLVAAVRPRLAVLTHLGMQLP 229 >gi|227431959|ref|ZP_03913979.1| ribonuclease Z [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352244|gb|EEJ42450.1| ribonuclease Z [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 318 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + TH H DHI G+ G R + K P+ +Y + + Sbjct: 43 QHQILKTTLRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQGADKNEPLTIYGPKGVKEFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + +YP IE D+ + + + +H RI + GFR Sbjct: 103 QTALR---ISETRLSYP-------IEYVDLTEGVIFEDHTFQVVAAPMRH-RIETWGFRV 151 >gi|149923575|ref|ZP_01911974.1| coenzyme PQQ synthesis protein B [Plesiocystis pacifica SIR-1] gi|149815544|gb|EDM75078.1| coenzyme PQQ synthesis protein B [Plesiocystis pacifica SIR-1] Length = 360 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 89/283 (31%), Gaps = 50/283 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTN--PKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G+P + D C+ P +SL I +RG ++D PD Sbjct: 53 RLRVLGIAQDGGLPHVACDCVRCEAARVEPSRASFVASLGIIGADDRGL---WLIDATPD 109 Query: 64 FYMQVL---------------------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 Q+ R +D + TH H H G+ L G+ Sbjct: 110 LPAQLELLGDVLERRHAAGSEGQPTLGRVDRSPLDGIALTHAHMGHYLGLAHL-GFEAGS 168 Query: 103 KRPIDVYAAPDCMKHLFESFRY----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + V A+ + L + + + PP + + + +++ Sbjct: 169 TSGVRVLASARMVDFLRANAPWDQLVALANIAPAVAPPGEAIELRAGDGTSLGVRATALS 228 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLE-------KLQNLDFLIIDAL-- 209 + G R + Y D N +P + E L +D L++DA Sbjct: 229 VPHRGEYTDTYAWYIEGARAKAL-YVPDTNPWPQWTAEAGLDLDAVLDGVDLLLVDATFY 287 Query: 210 -------KNGLHSSHFSLSESLKKIE-LINPKNA-ILTHMHVD 243 ++ H + +++ +E ++ A H++ Sbjct: 288 SGDELPGRDTTKIGHPLVVDTMALLEGRLSEDFAVWFVHLNHS 330 >gi|307332186|ref|ZP_07611270.1| Adenosylcobinamide-phosphate guanylyltransferase [Streptomyces violaceusniger Tu 4113] gi|306882175|gb|EFN13277.1| Adenosylcobinamide-phosphate guanylyltransferase [Streptomyces violaceusniger Tu 4113] Length = 399 Score = 61.7 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR +C + R +SL I + +++D P Sbjct: 1 MELTLLGTGAPDGLPRHGCPCASCAAAVGEEARAATSLLI--------DGALLIDLTPGV 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPHA 86 R + + VL +HPHA Sbjct: 53 AFAAARAGHSLAGVRQVLLSHPHA 76 >gi|320528200|ref|ZP_08029365.1| putative ribonuclease Z [Solobacterium moorei F0204] gi|320131548|gb|EFW24113.1| putative ribonuclease Z [Solobacterium moorei F0204] Length = 305 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 101/328 (30%), Gaps = 101/328 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + VP NR +SL + R + T++VD G Sbjct: 2 LDICLLGTGGT--VPLP-------------NRWL-TSLLV-----RWNGNTLLVDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 + + + +ID +L TH H DH G+ GL K +R + +Y K L E Sbjct: 41 QIAIHQHGYSCKAIDTILLTHFHTDHTAGLPGLLLTMAKSERTEAVTIYGP----KGLTE 96 Query: 121 SFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F +K Y P + + I+ + +K ++ + +H + + F Sbjct: 97 VFEGIYK---VARYIPFEIKLVEIDGPQIDFEIKG----LKIKALHAKHS-VPCYAYIFE 148 Query: 180 ---------------------------------------------------NVAYCTDVN 188 + Y TD Sbjct: 149 LDRTRKFDKDKAIAKGVPMQLWGKLQKGNTIEFDGKIYTPDDVLGESRQGLKMVYATDTR 208 Query: 189 AFPAESLEKLQNLDFLIIDALKNGL-------HSSHFSLSESLKKIELINPKNAILTHMH 241 E + N D I + + + H ++ E+ + + K TH Sbjct: 209 PL-DELITLAGNADLYIGEGMYGDPEKIEKASLNKHSTMQETAILAKKMMVKELWFTHYS 267 Query: 242 VDLD----YDMVLKSTPSRVVPAFDGMQ 265 + Y+ V+ ++ V A DG Q Sbjct: 268 PSIKDPSVYEDVIHQIFAQAVIAKDGQQ 295 >gi|258539967|ref|YP_003174466.1| metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705] gi|257151643|emb|CAR90615.1| Metal-dependent hydrolase [Lactobacillus rhamnosus Lc 705] Length = 245 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 33/211 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DH + L+ ++ +K Sbjct: 25 ESGDYHLLMDLGSGGLLALEKVFDPLQLDAVLLTHYHHDHTADVGVLQYFYQLRKGNKKV 84 Query: 105 -PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 P+ +Y L F +L ++ + G + Sbjct: 85 SPLPIYG--HTKDPLN------FGSLTFGSFTQGI--------GYTGDSTLHLGPLTLTF 128 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHS 215 + QH + + R + +D F + ++ D L+ D L + Sbjct: 129 LETQH-PVPAFAVRIKEEGTNKVLVNTSDTRYFSGL-VPFAKHADLLMADTNFLADQPAP 186 Query: 216 S-HFSLSESLKKIELINPKNAILTHMHVDLD 245 H + E+ + K +LTH+ LD Sbjct: 187 RWHLTAPEAGTLAKEAQVKRLLLTHLPQQLD 217 >gi|229552596|ref|ZP_04441321.1| metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1] gi|229314148|gb|EEN80121.1| metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1] Length = 245 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 33/211 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 + +++D G + + + L +DAVL TH H DH + L+ ++ +K Sbjct: 25 ESGDYHLLMDLGSGGLLALEKVFDPLQLDAVLLTHYHHDHTADVGVLQYFYQLRKGNKKV 84 Query: 105 -PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 P+ +Y L F +L ++ + G + Sbjct: 85 SPLPIYG--HTKDPLN------FGSLTFGSFTQGI--------GYTGDSTLHLGPLTLTF 128 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHS 215 + QH + + R + +D F + ++ D L+ D L + Sbjct: 129 LETQH-PVPAFAVRIKEEGTNKVLVNTSDTRYFSGL-VPFAKHADLLMADTNFLADQPAP 186 Query: 216 S-HFSLSESLKKIELINPKNAILTHMHVDLD 245 H + E+ + K +LTH+ LD Sbjct: 187 RWHLTAPEAGTLAKEAQVKRLLLTHLPQQLD 217 >gi|28871098|ref|NP_793717.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854348|gb|AAO57412.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331017400|gb|EGH97456.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGSRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|289676519|ref|ZP_06497409.1| Beta-lactamase-like protein [Pseudomonas syringae pv. syringae FF5] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEITGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|229148012|ref|ZP_04276351.1| hypothetical protein bcere0012_51330 [Bacillus cereus BDRD-ST24] gi|228635437|gb|EEK91928.1| hypothetical protein bcere0012_51330 [Bacillus cereus BDRD-ST24] Length = 249 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNKNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|78223151|ref|YP_384898.1| Beta-lactamase-like [Geobacter metallireducens GS-15] gi|78194406|gb|ABB32173.1| Beta-lactamase-like protein [Geobacter metallireducens GS-15] Length = 261 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 49/224 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-----IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T V++D G V R V+ +D + +H H DH+ G+ L +K Sbjct: 23 ESDGTRVLIDAGLSAREIVRRLAVIEVEPADLDGLFISHEHVDHVRGVG-----VLARKY 77 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V+ + + E F + Y ++I+ P Sbjct: 78 RLPVHVSYPTHHEVREGFGDAPVVEFESGYSFGFRDLLID------------------PF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +GF G V TD+ +KL+ L++++ L G + Sbjct: 120 PITHDACDPVGFTIESKEGKVGIATDLGTATRLVADKLKRCRVLVLESNHDEEMLMGGPY 179 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 H + I ++ H+ + ++ + + Sbjct: 180 PWH--------LKQRIKSRHG---HLSNNDSAALLAEVLHPGLE 212 >gi|330964851|gb|EGH65111.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGTRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|331701139|ref|YP_004398098.1| ribonuclease Z [Lactobacillus buchneri NRRL B-30929] gi|329128482|gb|AEB73035.1| Ribonuclease Z [Lactobacillus buchneri NRRL B-30929] Length = 312 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 30/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N+ + D G Sbjct: 1 MQIEFLGTGAGS----------------PGKFRNVSSLALRLLDE--INSVWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + I+ + +H H DHI G+ GL Q P+D+Y +++ Sbjct: 43 QHQILRSTIRPRKIEKIFISHLHGDHIFGLPGLLSSRSFQGGNTPLDIYGPKGIKEYVNV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + + +N + + + + A P+ RI+S G+R Sbjct: 103 SLK-----ISESRLSYKINFHELPKDTDGKIFEGKKFTVYAAPLDH---RITSFGYRV 152 >gi|91790505|ref|YP_551457.1| cyclic-AMP phosphodiesterase [Polaromonas sp. JS666] gi|91699730|gb|ABE46559.1| cyclic-AMP phosphodiesterase [Polaromonas sp. JS666] Length = 263 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 71/189 (37%), Gaps = 22/189 (11%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C ++ RT +S + ++VD G L E + ID VL TH H D Sbjct: 8 CSGAIARDCRT-TSFLLDHD--------LLVDAGTGVGDLTLDE-MRGIDHVLLTHSHLD 57 Query: 88 HIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIEN 145 H+ + + QK RPI ++A + L D P P I Sbjct: 58 HVAALPLMVDAIAGQKTRPIQIHALQGTIDALKAHIFNNTIWPDFSRIPDPATPFISFHP 117 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNL 201 ++ ++ AG IE +P + + ++G+ G + D PA ++ L Sbjct: 118 LELGQTLELAGKHIEVLPAVH---TVPAVGYAVSAGKGCWVFTGDTERNPAL-WARINQL 173 Query: 202 DF--LIIDA 208 D L+I+ Sbjct: 174 DVAMLVIET 182 >gi|319939368|ref|ZP_08013728.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] gi|319811354|gb|EFW07649.1| zinc-dependent hydrolase [Streptococcus anginosus 1_2_62CV] Length = 267 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + + +DA+L TH H DHIHG+ L +K + Sbjct: 25 PKKRLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + + V + + + G I+ Sbjct: 80 DIYANQETWNAME---------------VALGKIDVSQKHIFEMGKTKTFGDIDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +R + TD ++N D +LI I+ L++G + Sbjct: 125 SHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPW 184 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + + I + K L H+ + Sbjct: 185 SLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKE 225 >gi|228905406|ref|ZP_04069361.1| hypothetical protein bthur0014_64710 [Bacillus thuringiensis IBL 4222] gi|228911301|ref|ZP_04075105.1| hypothetical protein bthur0013_54390 [Bacillus thuringiensis IBL 200] gi|228924206|ref|ZP_04087477.1| hypothetical protein bthur0011_51770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961725|ref|ZP_04123329.1| hypothetical protein bthur0005_51630 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228968611|ref|ZP_04129596.1| hypothetical protein bthur0004_53830 [Bacillus thuringiensis serovar sotto str. T04001] gi|229051131|ref|ZP_04194675.1| hypothetical protein bcere0027_50820 [Bacillus cereus AH676] gi|229072927|ref|ZP_04206123.1| hypothetical protein bcere0025_50870 [Bacillus cereus F65185] gi|229112875|ref|ZP_04242406.1| hypothetical protein bcere0018_51120 [Bacillus cereus Rock1-15] gi|229130708|ref|ZP_04259661.1| hypothetical protein bcere0015_51390 [Bacillus cereus BDRD-Cer4] gi|229153620|ref|ZP_04281797.1| hypothetical protein bcere0011_51490 [Bacillus cereus m1550] gi|229181708|ref|ZP_04309031.1| hypothetical protein bcere0005_50470 [Bacillus cereus 172560W] gi|229193713|ref|ZP_04320654.1| hypothetical protein bcere0002_53560 [Bacillus cereus ATCC 10876] gi|228589738|gb|EEK47616.1| hypothetical protein bcere0002_53560 [Bacillus cereus ATCC 10876] gi|228601741|gb|EEK59239.1| hypothetical protein bcere0005_50470 [Bacillus cereus 172560W] gi|228629849|gb|EEK86501.1| hypothetical protein bcere0011_51490 [Bacillus cereus m1550] gi|228652725|gb|EEL08610.1| hypothetical protein bcere0015_51390 [Bacillus cereus BDRD-Cer4] gi|228670554|gb|EEL25867.1| hypothetical protein bcere0018_51120 [Bacillus cereus Rock1-15] gi|228710173|gb|EEL62151.1| hypothetical protein bcere0025_50870 [Bacillus cereus F65185] gi|228722194|gb|EEL73595.1| hypothetical protein bcere0027_50820 [Bacillus cereus AH676] gi|228791103|gb|EEM38720.1| hypothetical protein bthur0004_53830 [Bacillus thuringiensis serovar sotto str. T04001] gi|228797960|gb|EEM44969.1| hypothetical protein bthur0005_51630 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835424|gb|EEM80794.1| hypothetical protein bthur0011_51770 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228848319|gb|EEM93169.1| hypothetical protein bthur0013_54390 [Bacillus thuringiensis IBL 200] gi|228854226|gb|EEM98929.1| hypothetical protein bthur0014_64710 [Bacillus thuringiensis IBL 4222] Length = 249 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|110801158|ref|YP_697296.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|110675805|gb|ABG84792.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] Length = 263 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 55/251 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSKKTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H ++S G+ + + TD+ F E L ++ + +++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKHKGKSASIATDIGTFTEEILRNIRESEVILLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVL 250 +K G + H S + K I I + IL H+ + + Sbjct: 169 VQMVKFGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKHRKIILGHLSNTNNVPELA 228 Query: 251 KSTPSRVVPAF 261 + V+ A Sbjct: 229 EQAVINVLNAH 239 >gi|75761476|ref|ZP_00741441.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206970448|ref|ZP_03231401.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218232694|ref|YP_002370237.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218900603|ref|YP_002449014.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|296505890|ref|YP_003667590.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|74491037|gb|EAO54288.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|206735025|gb|EDZ52194.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|218160651|gb|ACK60643.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218541502|gb|ACK93896.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|296326942|gb|ADH09870.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 264 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|256375158|ref|YP_003098818.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] gi|255919461|gb|ACU34972.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] Length = 270 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 80/265 (30%), Gaps = 49/265 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGC SL P + SS + V +D G Sbjct: 3 LTVLGCSGSLPGPE-----------------SPSSGYL----VESGGCAVALDLGSGVLA 41 Query: 67 QVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPDCMK 116 + + D A+L +H H DH L P + V+ + Sbjct: 42 AMQARECDPFDLGALLLSHLHPDHCADFTTLAVMRRYHIHPPYDAYQRKLPVHGPSEVAD 101 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + L + + V++ + G +H + GF Sbjct: 102 RLARAYAESAEELATTDLSDVFDFHVLDAGSFEV------GPFRVRSRPVEHS-CEAHGF 154 Query: 177 RFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL----KNGLHSSHFSLSESLKKI 227 R +AY D P +L L +D L+ +A + H S +++ + Sbjct: 155 RLEADGAAIAYTGDSG--PCAALADLASGVDLLLAEATWTDHPDRPLGEHLSGAQAGRLA 212 Query: 228 ELINPKNAILTHMHVDLDYDMVLKS 252 +LTH+ D VL Sbjct: 213 HEAGVGELVLTHLAPWTDPAEVLAE 237 >gi|66044796|ref|YP_234637.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] gi|63255503|gb|AAY36599.1| Beta-lactamase-like [Pseudomonas syringae pv. syringae B728a] Length = 252 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEIAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|157150207|ref|YP_001450080.1| zinc-dependent hydrolase [Streptococcus gordonii str. Challis substr. CH1] gi|262282635|ref|ZP_06060403.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] gi|157075001|gb|ABV09684.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus gordonii str. Challis substr. CH1] gi|262261926|gb|EEY80624.1| zinc-dependent hydrolase [Streptococcus sp. 2_1_36FAA] Length = 267 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 79/236 (33%), Gaps = 54/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G + + + +DA+L TH H DHIHG+ L +K + Sbjct: 25 AQKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVG-----VLARKYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA D K + + I + E V G I+ Sbjct: 80 DIYANEDTWKAMDSALGKI----------DISQKHIFEMGKV-----MTFGDIDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD ++N D +LI ++ L++G + Sbjct: 125 SHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVVENADGYLIESNHDVEILRSGAYPW 184 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 185 SLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 240 >gi|42784656|ref|NP_981903.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206975806|ref|ZP_03236717.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217962955|ref|YP_002341533.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|222098939|ref|YP_002532997.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|42740588|gb|AAS44511.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|206745900|gb|EDZ57296.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217063510|gb|ACJ77760.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|221242998|gb|ACM15708.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|324329413|gb|ADY24673.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 264 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|330685978|gb|EGG97601.1| ribonuclease Z [Staphylococcus epidermidis VCU121] Length = 306 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 101/301 (33%), Gaps = 74/301 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQA---IALNLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + ID + TH H DHI G+ GL R + + +P+ + K++ Sbjct: 43 QHQILHHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTLVGPKGIQKYIE 102 Query: 120 ES-------FRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQHG 169 + Y ++ D + N +++ + +KS G IE P Sbjct: 103 TTLTLSESHLNYPITYIEIDESLNYHHNGFIVQAEMLNHGIKSFGYRIETPTTPGTIDVD 162 Query: 170 RISSLG---------------FRFGNVAYCTD----------VNAFPAESLE------KL 198 + ++G F F Y +D V A ++ Sbjct: 163 ALKAIGLEPGPKYQEVKTNNTFEFNGKVYQSDEFKGEAKSGPVVAIFGDTKPCPNEHIIA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 D ++ +A L N H SH + + I N K +++THM + + Sbjct: 223 NEADIMVHEATYIEGEKTLANSYHHSH--IDDVFNLIRQANVKQSLITHMSNRYTKEEIE 280 Query: 251 K 251 Sbjct: 281 N 281 >gi|229035120|ref|ZP_04189066.1| hypothetical protein bcere0028_51460 [Bacillus cereus AH1271] gi|229142211|ref|ZP_04270735.1| hypothetical protein bcere0013_52960 [Bacillus cereus BDRD-ST26] gi|229176137|ref|ZP_04303630.1| hypothetical protein bcere0006_52050 [Bacillus cereus MM3] gi|229199591|ref|ZP_04326252.1| hypothetical protein bcere0001_50890 [Bacillus cereus m1293] gi|228583996|gb|EEK42153.1| hypothetical protein bcere0001_50890 [Bacillus cereus m1293] gi|228607372|gb|EEK64701.1| hypothetical protein bcere0006_52050 [Bacillus cereus MM3] gi|228641229|gb|EEK97536.1| hypothetical protein bcere0013_52960 [Bacillus cereus BDRD-ST26] gi|228728186|gb|EEL79216.1| hypothetical protein bcere0028_51460 [Bacillus cereus AH1271] Length = 249 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|116618569|ref|YP_818940.1| beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271231|sp|Q03W55|RNZ_LEUMM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116097416|gb|ABJ62567.1| RNAse Z [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 318 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + TH H DHI G+ G R + K P+ +Y + + Sbjct: 43 QHQILKTTLRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQGADKNEPLTIYGPKGVKEFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + +YP IE D+ + + + +H RI + GFR Sbjct: 103 QTALR---ISETRLSYP-------IEYVDLTEGVIFEDHTFQVVAAPMRH-RIETWGFRV 151 >gi|294629585|ref|ZP_06708145.1| metal-dependent hydrolase [Streptomyces sp. e14] gi|292832918|gb|EFF91267.1| metal-dependent hydrolase [Streptomyces sp. e14] Length = 250 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 76/252 (30%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DAV +H HADH ID + + R P+ VY Sbjct: 40 LGELQRHCGLYDLDAVFLSHLHADHC--IDMCVYFVARYYRYDGGRCDPLPVYGPEGTEH 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + + ++ G H + + Sbjct: 98 RLTTAYA---DTPSASSMSEVFDFHTVKPG------TFEIGPFTVHTERVAH-PVEAYAI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + + Y D E + D + +A K + H + E+ + Sbjct: 148 RIEHGGRTLTYSGDT-GVSDALEELARGADLFLCEAAFTDGKEDIPDLHLNGREAGEAAA 206 Query: 229 LINPKNAILTHM 240 ++ +LTH+ Sbjct: 207 RAGVRSLVLTHI 218 >gi|229495604|ref|ZP_04389337.1| metallo-beta-lactamase family protein [Porphyromonas endodontalis ATCC 35406] gi|229317587|gb|EEN83487.1| metallo-beta-lactamase family protein [Porphyromonas endodontalis ATCC 35406] Length = 268 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 84/240 (35%), Gaps = 48/240 (20%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++D G + L Q I VL TH HADHI G+ L + Sbjct: 19 SSGEGGLLIDAGIPTRTIARALAFQGIPIEGHIMGVLVTHEHADHIKGLSALA-----LQ 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VY ++ +S RY +K ++ P V + E +P Sbjct: 74 YHLPVYTTG-TIQQAIDSLRY-YKKMEGLPRPT-----------VEVGEAFCLAGFEIVP 120 Query: 164 ILQQHGRISSLGFRF--GNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H ++G+ F G+ + TDV AE LI++A L G Sbjct: 121 FNVPHDSTENVGYYFRRGDFSLTLATDVGHVTAEVHRYAALPRHLILEANYDPEMLWRGR 180 Query: 214 HS-----------SHFSLSESLKKIELI-NP--KNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H S ES + + + +P + L H+ + ++ + + T V+ Sbjct: 181 YPQYLKERVSGGNGHLSNLESAEFLCDVYHPELERVWLCHLSRENNHPELCRKTFEDVLF 240 >gi|283458298|ref|YP_003362917.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa DY-18] gi|283134332|dbj|BAI65097.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa DY-18] Length = 297 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 71/259 (27%), Gaps = 53/259 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P P S ++ G +I+D G Sbjct: 1 MRLTVIGCTGSFPGPV--------SPA--------SCYMLTATDFAGRTWRIIMDMGNGS 44 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHL 118 + R + IDA+L +H H DH + GL K I +Y ++L Sbjct: 45 LGMLQRHIDLSDIDAILISHLHPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGPAAINEYL 104 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + P E + G P H R Sbjct: 105 SATHG---------LDPEPGMSTEFEYHTWTEGEPVQIGPFRVEPFRVVHPSKDPYALRI 155 Query: 179 --------GNVAYCTDVNAFPAESLEKLQNLDFLII---------DALKNGLHSSHFSLS 221 +Y D ++ + D + DAL+ H + Sbjct: 156 TCNDREGHTVFSYSGDT-DLCEGLVKAARGADLFLCEAAYQEGRDDALRGI----HLTGK 210 Query: 222 ESLKKIELINPKNAILTHM 240 + + +N +LTH+ Sbjct: 211 RAGEAATEAGVRNLLLTHL 229 >gi|253999510|ref|YP_003051573.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|253986189|gb|ACT51046.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] Length = 258 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 29/165 (17%) Query: 53 NTTVIVDTGPDFY---MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +TT+++D G ++ R + S++ +L TH H DH G+ L F I Sbjct: 22 DTTLLLDCGFGLRDAIHRLQRAGISPESLNGILVTHEHDDHAGGVFKLANKFG-----IP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+ + R + VI+++ VP ++ G P Sbjct: 77 VWLTHGTFTMVERLMP------KQRGF----ELHVIDSH-VPFTIQDLG----INPFPVP 121 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + + F N + TD L L+++ Sbjct: 122 HDAREPVQYTFDNGNTKLGVLTDTGTSTPHIEAMLSGCHGLVLEC 166 >gi|182626502|ref|ZP_02954252.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177908188|gb|EDT70752.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 263 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 55/251 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSEKTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H ++S G+ + + TD+ F E L ++ + +++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKHKGKSASIATDIGTFTEEILRNIRESEVILLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVL 250 +K G + H S + K I I + IL H+ + + Sbjct: 169 VQMVKFGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMKHDKYRKIILGHLSNTNNVPELA 228 Query: 251 KSTPSRVVPAF 261 + V+ A Sbjct: 229 EQAVINVLNAH 239 >gi|124383458|ref|YP_001029080.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10229] gi|124291478|gb|ABN00747.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10229] Length = 258 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + + +V +DA+L TH H DH+ Sbjct: 14 ALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYTSWGTARAV------------------GADEADVDLHVLWSDETAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEA 166 >gi|331268257|ref|YP_004394749.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329124807|gb|AEB74752.1| metallo-beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 262 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 87/241 (36%), Gaps = 54/241 (22%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N+++++D G + ++ + + ID + TH H DH+ G+ L ++ Sbjct: 18 SSGNSSILIDAGLPGKHIEKALESINKNPNEIDGIFVTHEHIDHVKGVG-----VLSRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA K + ++ I I + + +K+ ++ Sbjct: 73 NIPIYANDLTWKSMLKNIGKI-----------KEENIKIICKNKSVTIKN----MDICNY 117 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H I +G+ V TD+ F E E +N D +++++ LK G + Sbjct: 118 SISHDAIDPVGYSIYAGKKKVCIATDLGYFSEEVEENTKNADIVLLESNHDIEMLKFGPY 177 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKSTPS 255 H S + K + + N KN IL H+ DL Y+ V+ Sbjct: 178 PYSLKKRILSNVGHLSNEDCGKAVVSMTQNNCKNIILGHLSKTNNYPDLAYETVVSVLRD 237 Query: 256 R 256 Sbjct: 238 N 238 >gi|319948538|ref|ZP_08022669.1| hypothetical protein ES5_04161 [Dietzia cinnamea P4] gi|319437785|gb|EFV92774.1| hypothetical protein ES5_04161 [Dietzia cinnamea P4] Length = 262 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 77/258 (29%), Gaps = 45/258 (17%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGC S+G P +S + E V++D GP Sbjct: 6 LTVLGCSGSIGGP--------------------TSPASGYLVEVDGLAPVVIDMGPGVLG 45 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHLFES 121 + R +L +H HADH + L + + + + + Sbjct: 46 ALQRHVAPEDATILLSHLHADHCLDVPSLLVLRRFGPGARGVGRVPLVGPSGTAYRIGVA 105 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV----IEAIPILQQHGRISSLGFR 177 A + + + + DV + G + +H S G R Sbjct: 106 -----SAEEPGAVDDLSDTFDVSTWDVTPEVAMRGDDDEVALHVRAERVEHPP-ESYGLR 159 Query: 178 FGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSLSESLKKIE 228 + +AY D A+ +E D L+ +A H S SE+ Sbjct: 160 LESGDGRVLAYSGDT-AYCDALVELAVGADVLLCEASWTHEEGRPPGIHMSGSEAGLTAR 218 Query: 229 LINPKNAILTHMHVDLDY 246 +LTH+ D+ Sbjct: 219 RAGVGRLVLTHIPPWTDH 236 >gi|302380868|ref|ZP_07269331.1| metallo-beta-lactamase domain protein [Finegoldia magna ACS-171-V-Col3] gi|303234850|ref|ZP_07321475.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] gi|302311363|gb|EFK93381.1| metallo-beta-lactamase domain protein [Finegoldia magna ACS-171-V-Col3] gi|302493968|gb|EFL53749.1| metallo-beta-lactamase domain protein [Finegoldia magna BVS033A4] Length = 277 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 35/179 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ +++D G + ++ + +DA+ TH HADHI GI L ++ + Sbjct: 22 EHSKILIDAGFSGKTIENLLKYINVDPSELDAIFVTHEHADHIKGIG-----VLSRRYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + A + + D Y + ENN ++ +PI Sbjct: 77 PIIANTETWYAMDNKIGKI---NDKNIY-------IFENNR-----HINFKDLDILPIKT 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +S G+ ++ TD E++++ + I+A LK G + Sbjct: 122 SHDSANSCGYVVSKDNKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDIDMLKYGSYP 180 >gi|116328095|ref|YP_797815.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331452|ref|YP_801170.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120839|gb|ABJ78882.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125141|gb|ABJ76412.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 318 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 83/264 (31%), Gaps = 71/264 (26%) Query: 56 VIVDTGPDFYM---QVLREQVLSIDAV---LYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 VI+D G +L E L ++TH H DHI G+ +F + +Y Sbjct: 75 VIIDGGTGIRELGNSILHEGFLEGKGKAKWIFTHTHWDHIQGV----PFF------VPLY 124 Query: 110 AAPDCM------KHLFESFRY-----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 A + +L E +Y F D + E P+ Sbjct: 125 APGNTFDILSSVDNLEERLKYQHSFTHFPVPYDGFRATKNFKFIPEGKAFPVTE-----S 179 Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLE-------KLQNLDFLIID 207 I AI +H S +RF ++ + +D F + +E + D L+ D Sbjct: 180 ISAISKSVRHPG-GSFSYRFEEEGKSLIFASDA-EFNLDEMENIQDYLNYFRGADVLVFD 237 Query: 208 ALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST------- 253 + S H S S + N K ++ H D YD Sbjct: 238 T-QYTFEESLQKIDWGHSSASMATDIALRANVKRLVM--FHHDPSYDDEKLDAVYLRALK 294 Query: 254 ------PSR---VVPAFDGMQFSS 268 P ++ A++G++ Sbjct: 295 YKEMFDPHNRLEIIMAYEGLELEV 318 >gi|169824155|ref|YP_001691766.1| metallo-beta-lactamase superfamily hydrolase [Finegoldia magna ATCC 29328] gi|167830960|dbj|BAG07876.1| metallo-beta-lactamase superfamily hydrolase [Finegoldia magna ATCC 29328] Length = 277 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 35/179 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ +++D G + ++ + +DA+ TH HADHI GI L ++ + Sbjct: 22 EHSKILIDAGFSGKTIENLLKYINVDPSELDAIFVTHEHADHIKGIG-----VLSRRYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + A + + D Y + ENN ++ +PI Sbjct: 77 PIIANTETWYAMDNKIGKI---NDKNIY-------IFENNR-----HINFKDLDILPIKT 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H +S G+ ++ TD E++++ + I+A LK G + Sbjct: 122 SHDSANSCGYVVSKDNKKLSIVTDTGIIEDSVYEEIKDSNLFFIEANHDIDMLKYGSYP 180 >gi|149371386|ref|ZP_01890872.1| ribonuclease Z [unidentified eubacterium SCB49] gi|149355524|gb|EDM44083.1| ribonuclease Z [unidentified eubacterium SCB49] Length = 301 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 92/331 (27%), Gaps = 97/331 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ +S + ++D G Sbjct: 1 MKLTILG----------------CHSATPRWDAHPTSQILEVKGHL-----FLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ R +V I + +H H DH G+ GL F R + +Y + + Sbjct: 40 QVQLRRYKVKFARIKHIFISHLHGDHFFGLVGLVSTFRLLGREADLHIYGPKGIKEAITL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + L + +++ + + + +++ IP+ R+ + GF Sbjct: 100 QLK-----LGKSWTNYGLYFHELDHTESEVVFEDDSVIVKTIPLEH---RVYTNGFLISE 151 Query: 179 ----------------------------GNV-----------------------AYCTDV 187 G+V A+C+D Sbjct: 152 KITERPLNINACRNLGIDKIYFNKIKQGGDVKAEDGSVIKNETLTLEPGAPKSYAFCSDT 211 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHS------SHFSLSESLKKIELINPKNAILTHMH 241 P + ++ + + H H + E+ I+ H Sbjct: 212 VYLP-SIVPIIKGATMIYHETTFLESHKDLAIKTKHSTAKEAAIIARDAEVGGLIVGHYS 270 Query: 242 -VDLDYDMVLKSTP---SRVVPAFDGMQFSS 268 DY+ K V+ +DG++ S Sbjct: 271 GRYNDYEDFKKEAQTVFENVIVGYDGLEVSF 301 >gi|167763041|ref|ZP_02435168.1| hypothetical protein BACSTE_01407 [Bacteroides stercoris ATCC 43183] gi|167699381|gb|EDS15960.1| hypothetical protein BACSTE_01407 [Bacteroides stercoris ATCC 43183] Length = 267 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 57/232 (24%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHI---HGIDGLRGYFLKQKRPID 107 +++D G + L+E + I AV TH HADHI G+ I Sbjct: 26 ILIDAGIAVRTIKKGLKEAGINMEMIRAVFVTHDHADHIKAVGGLGEKLN--------IP 77 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + +S+ K Y P+ +E+ Sbjct: 78 IYTTARIHEGINKSYCMTEKLHSSVRYLEKQQPMQLED-------------FRIESFEVP 124 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 H ++G+ ++ TD+ + + ++LI++A L+ G + Sbjct: 125 HDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAHYICKANYLILEANYDDEMLRMGTYPQY 184 Query: 216 ---------SHFSLSESLKKI-----ELINPKNAILTHMHVDLDYDMVLKST 253 H S ++ + + E + L H+ D ++ + T Sbjct: 185 LKERITGRTGHMSNIDTAEFLAENFTEHLQ--YIWLCHLSKDNNHPELAYKT 234 >gi|115374435|ref|ZP_01461717.1| TaR3 [Stigmatella aurantiaca DW4/3-1] gi|115368527|gb|EAU67480.1| TaR3 [Stigmatella aurantiaca DW4/3-1] Length = 322 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 26/219 (11%) Query: 47 VSERGSNTTVIV-DTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQ 102 E G +++ D G + L Q ++ A + +H H DH+ G+ F+ Q Sbjct: 74 CVEMGVGDELLIFDLGTGARPLGEHLVAQAKAVQASIFLSHYHYDHLQGLPFFTPIFMPQ 133 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 Y +P + L E V ++ +DV + G Sbjct: 134 -NAFTFYGSPRNGQCLKEILSGQMTQPYFPVTAEGVFRAQLDYHDVHAGERVTVGSASIS 192 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDVNAFPAES---LEKLQNLDFLIID-------- 207 + H +LG+R +V Y TD+ + D LI D Sbjct: 193 TLELNHPG-GNLGYRVECDGRSVVYATDIEQSEEGDARFFAFAKGADLLIYDSMYTEDEY 251 Query: 208 ALKNGLHSS---HFSLSESLKKIELINPKNAILTHMHVD 243 ++G + H + +++ K +L H D Sbjct: 252 CGRHGPARTGWGHSTWQAAVRAANESQAKTLVL--FHHD 288 >gi|86157177|ref|YP_463962.1| Beta-lactamase-like [Anaeromyxobacter dehalogenans 2CP-C] gi|85773688|gb|ABC80525.1| Beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 304 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 86/237 (36%), Gaps = 41/237 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RP 105 T+ VD GP ++ L + +DA++ TH H DH + + Sbjct: 55 GGATIWVDPGPGALVRALSSRPKIDPAKVDALVITHRHLDHAGDATAVVEAMTRGGFSPR 114 Query: 106 IDVYAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + A D ++ FRY F A P + + A GV P Sbjct: 115 GTLLAPRDALETEPVVFRYAQAFPARVGVLAPGARHAL-------------APGVTLETP 161 Query: 164 ILQQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG---LH 214 + HG +++ G R G+V ++A P +D L+++ + Sbjct: 162 VAHDHGVETYGYLLTAPGLRAGHVVDTFWMDALPEA----YAGVDLLLVNTTRLQGGDRR 217 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRV--VPAFDGM 264 H ++ + + + P+ A+LTH+ + L D + S + V V A DG Sbjct: 218 YLHLGADDAERLVAAVRPRLAVLTHLGMQLPPRKADAAALEISRRTGVPTVAARDGW 274 >gi|170733447|ref|YP_001765394.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169816689|gb|ACA91272.1| beta-lactamase domain protein [Burkholderia cenocepacia MC0-3] Length = 258 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIADLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|317496358|ref|ZP_07954712.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316913494|gb|EFV34986.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 271 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 80/233 (34%), Gaps = 61/233 (26%) Query: 41 SLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ I N +VD G + Q+ R + +DA+ TH H DHI GI Sbjct: 14 SVYIE-----DDNFRCLVDVGLTGKKITENLGQIGR-DIKDVDAIFVTHEHIDHIKGIG- 66 Query: 95 LRGYFLKQKRPIDVYAAPDCMKH------LFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 L +K I VYA + + ++ F+ D + + +V N Sbjct: 67 ----VLARKYNIPVYANKLTWDNMSKIGEIKSDLKFHFEKEDSKIFNGLV------VNSF 116 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI--- 205 + +A G R V+ TD + ++ +++ L+ Sbjct: 117 GVSHDAANPQFYVF---------EKDGKR---VSILTDTGYISDKMVDYVKDSHTLVYES 164 Query: 206 ---IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 + L +G + H S ++S + I N KN +L H+ Sbjct: 165 NHEENVLLSGPYPWPTKQRILSDKGHLSNTDSANYLTRIVGSNTKNVLLAHLS 217 >gi|30265480|ref|NP_847857.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47531048|ref|YP_022397.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49188299|ref|YP_031552.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49479014|ref|YP_039452.1| zinc-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145270|ref|YP_086727.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|65317443|ref|ZP_00390402.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Bacillus anthracis str. A2012] gi|118480490|ref|YP_897641.1| zinc-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|165872530|ref|ZP_02217163.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167636226|ref|ZP_02394529.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167641435|ref|ZP_02399685.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170689206|ref|ZP_02880403.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170708659|ref|ZP_02899098.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177651929|ref|ZP_02934512.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190568936|ref|ZP_03021838.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196036128|ref|ZP_03103528.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|196041941|ref|ZP_03109228.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196045464|ref|ZP_03112695.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|218906654|ref|YP_002454488.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225867443|ref|YP_002752821.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227818231|ref|YP_002818240.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229600134|ref|YP_002869671.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254687097|ref|ZP_05150955.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254724120|ref|ZP_05185905.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254735137|ref|ZP_05192847.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254742154|ref|ZP_05199841.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755936|ref|ZP_05207968.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254761648|ref|ZP_05213668.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|301056936|ref|YP_003795147.1| putative Zn-dependent hydrolase [Bacillus anthracis CI] gi|30260158|gb|AAP29343.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47506196|gb|AAT34872.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49182226|gb|AAT57602.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49330570|gb|AAT61216.1| possible Zn-dependent hydrolase, glyoxylase family [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978739|gb|AAU20289.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|118419715|gb|ABK88134.1| Zn-dependent hydrolase, glyoxylase family [Bacillus thuringiensis str. Al Hakam] gi|164711753|gb|EDR17297.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167510610|gb|EDR86006.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167528341|gb|EDR91112.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170126441|gb|EDS95329.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170666849|gb|EDT17615.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172082633|gb|EDT67697.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190560003|gb|EDV13986.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|195991295|gb|EDX55263.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|196023671|gb|EDX62347.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196027196|gb|EDX65816.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|218537280|gb|ACK89678.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225786478|gb|ACO26695.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|227007798|gb|ACP17541.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229264542|gb|ACQ46179.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|300379105|gb|ADK08009.1| possible Zn-dependent hydrolase, glyoxylase family [Bacillus cereus biovar anthracis str. CI] Length = 264 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|255326295|ref|ZP_05367381.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa ATCC 25296] gi|255296749|gb|EET76080.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Rothia mucilaginosa ATCC 25296] Length = 297 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 71/259 (27%), Gaps = 53/259 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P P S ++ G +I+D G Sbjct: 1 MRLTVIGCTGSFPGPV--------SPA--------SCYMLTATDFAGRTWRIIMDMGNGS 44 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHL 118 + R + IDA+L +H H DH + GL K I +Y ++L Sbjct: 45 LGMLQRHIDLSDIDAILISHLHPDHCIDLSGLHVAVKWDPRGWPKGRIPLYGPAAINEYL 104 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + E + G P H R Sbjct: 105 SATHG--LDPDPGMS-------TEFEYHTWTEGEPVQIGPFRVEPFRVVHPSKDPYALRI 155 Query: 179 --------GNVAYCTDVNAFPAESLEKLQNLDFLII---------DALKNGLHSSHFSLS 221 +Y D ++ + D + DAL+ H + Sbjct: 156 TCNDREGHTVFSYSGDT-DLCEGLVKAARGADLFLCEAAYQEGRDDALRGI----HLTGK 210 Query: 222 ESLKKIELINPKNAILTHM 240 + + +N +LTH+ Sbjct: 211 RAGEAATEAGVRNLLLTHL 229 >gi|291301454|ref|YP_003512732.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570674|gb|ADD43639.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 257 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 25/206 (12%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF------LKQKR 104 +T + +D G + R ++ +DA+ +H HADH D L Y+ L+ Sbjct: 32 GDTRIWLDAGTGTLAALQRHVRLTDLDAIWISHAHADHSA--DLLTAYYALLYADLRLTA 89 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ +Y P L + + + + ++ G + Sbjct: 90 PLPLYGPPGIADRLA---DFLTNGPERSPVERAFTIHELHDGH-----RAEIGPLSLTTR 141 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSSHF 218 +HG + + R + + Y D + E D L+ +A H Sbjct: 142 AVEHG-LPAFAVRVDDGDVSLVYSGDTAPCAKLT-ELATTCDTLLCEADSAEPSTPPVHH 199 Query: 219 SLSESLKKIELINPKNAILTHMHVDL 244 + ++ I+TH+ L Sbjct: 200 TPEDAGTTATAAGVGRLIITHVGPFL 225 >gi|149918730|ref|ZP_01907217.1| ribonuclease Z [Plesiocystis pacifica SIR-1] gi|149820331|gb|EDM79747.1| ribonuclease Z [Plesiocystis pacifica SIR-1] Length = 331 Score = 61.7 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 86/327 (26%), Gaps = 90/327 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R + D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRYRNHNG--------YLIRWDGEGFLFDP 38 Query: 61 GPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMK 116 G Q++ V S D + TH H DH G+ G+ P+ VY K Sbjct: 39 GEGIQRQLIHAGVSSTDITKICITHFHGDHCLGLAGISQLLSLDGCPHPVHVYFPASGEK 98 Query: 117 HLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + P+ P + + G +E HG + ++G Sbjct: 99 YYHRLRRASIYHDRAEVHGHPVPEPGPERTCVWSVDEERKGLKLEVA--SLNHG-VPTMG 155 Query: 176 FRF-GNVAYCTDVNAFPAE----------------------------------------- 193 +R + D + Sbjct: 156 YRLEERGGWTLDPDKLREAGLRGPMIKQLQQAGELEVDGKTVTLADVGKPRRGQVVAFVM 215 Query: 194 -------SLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + + + D LI ++ L+ + H + ++ + + + +LTH Sbjct: 216 DTRLCKGAFDLAEGADMLICESTYIEADLQRAKDNGHLTAKQAARIAKEAGVEQLVLTHF 275 Query: 241 HVDLDY-----DMVLKSTPSRVVPAFD 262 D + + +V A D Sbjct: 276 SRRYDRNAPFLEEAREVFDGEIVAARD 302 >gi|254516538|ref|ZP_05128597.1| metallo-beta-lactamase superfamily protein [gamma proteobacterium NOR5-3] gi|219674961|gb|EED31328.1| metallo-beta-lactamase superfamily protein [gamma proteobacterium NOR5-3] Length = 308 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 58/257 (22%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLK 101 + R ++VD G +DA+L +H HADH G+ L GYF Sbjct: 46 YLVWRNGKARLLVDLGGGAILRFAQSGASFADLDAILLSHLHADHSAGLPALLKSGYFAH 105 Query: 102 QKRPIDVYAAP-------------DCMKHLFES----FRYCFKALDDRTYPPIVNPIVIE 144 + R + V + MK L ++ ++Y L + P + + Sbjct: 106 RTRSLPVVGPAAGGNTKVHFPSLDEYMKSLLQTGSGAYQYLGDYLSEEGGMPPLKLTTVA 165 Query: 145 N---NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEK 197 N + + + + ++ HG + +L +R V + D + ++ Sbjct: 166 NKLGDKTSVVTEGGQAGLSVQAMVVSHGPVPTLAYRIEVDDKVVVFAGDQDGRTDAFVDF 225 Query: 198 LQNLDFLIIDALKNGLHSSHFSLSESL---------------KKIELINPKNAILTHMHV 242 ++ + L++ H + E+ + + K+ +L+H Sbjct: 226 ARDANLLVL----------HMPIHEAAGAAARALHAPPSKLGEVADAAEAKSVLLSHFM- 274 Query: 243 DLDYDMVLKSTPSRVVP 259 L P V Sbjct: 275 ----ARSLADLPGNVAL 287 >gi|134296274|ref|YP_001120009.1| beta-lactamase domain-containing protein [Burkholderia vietnamiensis G4] gi|134139431|gb|ABO55174.1| beta-lactamase domain protein [Burkholderia vietnamiensis G4] Length = 258 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 53/251 (21%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+ + T V++D G + + L V +DA+L TH H+DH+ Sbjct: 14 ALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGVDDLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + IP H L F F + TDV L D L++++ Sbjct: 111 RDLAVIPYTVPHDAREPLQFVFMDGSRRLGVLTDVGMATPHITTVLSGCDALVLESNHDT 170 Query: 209 -------------LKNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKS 252 + G H S + L +E ++ + H+ + + + Sbjct: 171 AMLAGSRYPQSLKARIGGSHGHLSNDAAAGILASLERSRLRHLVAAHLSQQNNRPELARQ 230 Query: 253 TPSRVVPAFDG 263 + V DG Sbjct: 231 AFAGV-LGTDG 240 >gi|297155504|gb|ADI05216.1| pyrroloquinoline quinone biosynthesis protein PqqB [Streptomyces bingchenggensis BCW-1] Length = 302 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 92/313 (29%), Gaps = 64/313 (20%) Query: 7 FTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G+P+ C +P RR +SL + +V+ PD Sbjct: 3 LRVLGTAAGGGLPQWNCACPGCSGARAHPGRRRRHASLAVRATEGHW----YLVNATPDL 58 Query: 65 YMQVL---------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ R + + V+ T DH GI LR +DV A Sbjct: 59 GDQIEDCPELHPGPRPRQTPLAGVVLTDAELDHTLGIARLREAA----GGVDVLATAPVR 114 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS--- 172 + L + D + ++ +P+ + + + A+P+ + R + Sbjct: 115 RALLDGLH----LGDVLGPYTTLRWRGLDAEPMPLA-EGSPLTVSAVPVSAKRPRYAAGM 169 Query: 173 ----------SLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGL 213 + R G++ Y + A+P D +I+D Sbjct: 170 DADAALDAAWVVALRLTDRETGGSLLYAPALAAWPDAFQRAAAEADCVIVDGTFWDDEEP 229 Query: 214 HSSHFSLSESLKK-----------IELIN--PKNAILTHMHVDLDYDMVLKSTPS----- 255 S FS + + + P + TH++ Sbjct: 230 RRSGFSTRTATGMGHLPIDGPGGTAKRLAELPGRCLYTHLNNTNPLADPAAPQYEALAGL 289 Query: 256 RVVPAFDGMQFSS 268 + A DGM Sbjct: 290 GLEVAADGMVIEL 302 >gi|184155103|ref|YP_001843443.1| beta-lactamase superfamily hydrolase [Lactobacillus fermentum IFO 3956] gi|254808643|sp|B2GBD1|RNZ_LACF3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|183226447|dbj|BAG26963.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus fermentum IFO 3956] Length = 310 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 82/292 (28%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + ER + + D G Sbjct: 1 MQIEFLGTGAGS----------------PSKQRNVSSLALRLLEERNAI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------P 112 Q+L + ++ + TH H DHI G+ G R + P+ +Y Sbjct: 43 QHQILHTTIRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIYGPKGIKDFVQ 101 Query: 113 DCMKHLFESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQH 168 +K Y F L + + + S G +E A P Sbjct: 102 TALKVSESRLSYPLKFVELTGDGEVFKDQTFTVTARRLDHKIASFGYRVEEAAHPGELMV 161 Query: 169 GRISSLGFRFGN---------------------------------VAYCTDVNAFPAESL 195 ++ G G VA D ++ Sbjct: 162 EKVRQAGIPSGPLYGQLKRGEVVTLPDGRTVDGHDFIGAPQPGRIVAILGDT-RVTDNAV 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + D L+ +A + + H + ++ + + +L H+ Sbjct: 221 KLAKGADVLVHEATFAKNEQRLAHNYYHSTSVQAATVAKKAGAQRLLLNHIS 272 >gi|107028727|ref|YP_625822.1| beta-lactamase-like [Burkholderia cenocepacia AU 1054] gi|116690114|ref|YP_835737.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897891|gb|ABF80849.1| beta-lactamase-like protein [Burkholderia cenocepacia AU 1054] gi|116648203|gb|ABK08844.1| beta-lactamase domain protein [Burkholderia cenocepacia HI2424] Length = 258 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIADLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|228918074|ref|ZP_04081602.1| hypothetical protein bthur0012_52700 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930468|ref|ZP_04093468.1| hypothetical protein bthur0010_51460 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936742|ref|ZP_04099533.1| hypothetical protein bthur0009_51770 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949184|ref|ZP_04111452.1| hypothetical protein bthur0007_53040 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094573|ref|ZP_04225640.1| hypothetical protein bcere0021_52760 [Bacillus cereus Rock3-42] gi|229124965|ref|ZP_04254139.1| hypothetical protein bcere0016_52420 [Bacillus cereus 95/8201] gi|229187691|ref|ZP_04314827.1| hypothetical protein bcere0004_52220 [Bacillus cereus BGSC 6E1] gi|228595759|gb|EEK53443.1| hypothetical protein bcere0004_52220 [Bacillus cereus BGSC 6E1] gi|228658466|gb|EEL14132.1| hypothetical protein bcere0016_52420 [Bacillus cereus 95/8201] gi|228688820|gb|EEL42651.1| hypothetical protein bcere0021_52760 [Bacillus cereus Rock3-42] gi|228810467|gb|EEM56820.1| hypothetical protein bthur0007_53040 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822951|gb|EEM68792.1| hypothetical protein bthur0009_51770 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829187|gb|EEM74824.1| hypothetical protein bthur0010_51460 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841554|gb|EEM86670.1| hypothetical protein bthur0012_52700 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 249 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|146319011|ref|YP_001198723.1| beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|146321221|ref|YP_001200932.1| beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|253752078|ref|YP_003025219.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253753903|ref|YP_003027044.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253755222|ref|YP_003028362.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|145689817|gb|ABP90323.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 05ZYH33] gi|145692027|gb|ABP92532.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus suis 98HAH33] gi|251816367|emb|CAZ51998.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251817686|emb|CAZ55434.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251820149|emb|CAR46486.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|292558661|gb|ADE31662.1| Beta-lactamase-like protein [Streptococcus suis GZ1] gi|319758445|gb|ADV70387.1| beta-lactamase superfamily hydrolase [Streptococcus suis JS14] Length = 267 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 54/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + IDA+L TH H+DHIHGI L +K + Sbjct: 25 DKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + V + + + G ++ Sbjct: 80 DIYANELTWQAMESKLGKI---------------DVAQKHIFELGAMKTFGDLDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLH-- 214 H +RF + TD + ++N D +LI I+ L+ G + Sbjct: 125 SHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIVENADAYLIESNHDIEILRAGSYSW 184 Query: 215 ---------SSHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H + + I + K L H+ +L + ++ Sbjct: 185 NLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL 240 >gi|254247813|ref|ZP_04941134.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124872589|gb|EAY64305.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 258 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEASSGTTTTRVLLDCGFSAKEVERRLGRLNLCIADLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGNRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|302187128|ref|ZP_07263801.1| Beta-lactamase-like protein [Pseudomonas syringae pv. syringae 642] Length = 252 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NETYVLVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEIAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|162450884|ref|YP_001613251.1| hypothetical protein sce2612 [Sorangium cellulosum 'So ce 56'] gi|161161466|emb|CAN92771.1| hypothetical protein sce2612 [Sorangium cellulosum 'So ce 56'] Length = 532 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 49/140 (35%), Gaps = 31/140 (22%) Query: 52 SNTTVIVDTGPDFY-MQVLREQV-----------LSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G F QVL +V +DAVL TH H DHI G+ L F Sbjct: 9 EGRRVLVDCGVMFPNDQVLGVEVAIPDLSYVREAGGVDAVLLTHGHEDHIGGLPSLLREF 68 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P+ V+ ++ + E + I + +V A G Sbjct: 69 -----PVPVFGTRFTLRLVRERLA--------------EHGIDVPLREVEPQQHFAAGPF 109 Query: 160 EAIPILQQHGRISSLGFRFG 179 A P+ H ++G+ Sbjct: 110 RAEPLRVTHSIPDAVGYAIE 129 >gi|228955713|ref|ZP_04117708.1| hypothetical protein bthur0006_50610 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803941|gb|EEM50565.1| hypothetical protein bthur0006_50610 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 249 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFLFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|71733363|ref|YP_273792.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|289628951|ref|ZP_06461905.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651067|ref|ZP_06482410.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298486121|ref|ZP_07004185.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71553916|gb|AAZ33127.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159366|gb|EFI00423.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325209|gb|EFW81276.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320327796|gb|EFW83804.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330868051|gb|EGH02760.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 252 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 82/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAANQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G + + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQVGALGIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|291520588|emb|CBK75809.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Butyrivibrio fibrisolvens 16/4] Length = 242 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 42/203 (20%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + +L TH H+DH+ G+ + +K +Y +K + A+DD + Sbjct: 24 DMAGLLVTHEHSDHVSGLG-----VIARKYHTPIYGTAATIKAIRSMKS--LGAIDDTLF 76 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAF 190 VI ++ + G ++ P H + +R N VA CTD+ + Sbjct: 77 ------HVIRPDE-----DFSIGSLKIHPFHISHDAADPVAYRIENANSKVAVCTDLGYY 125 Query: 191 PAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELI--- 230 ++ L LD L+++A L+ G + H S S K + + Sbjct: 126 DGYIVDNLTGLDALLLEANHDIHMLEVGSYPYPLKRRILGDHGHLSNEASGKLLSQVLND 185 Query: 231 NPKNAILTHMHVDLDYDMVLKST 253 + K+ L H+ + +Y + T Sbjct: 186 DIKHVFLGHLSHENNYPDLAYET 208 >gi|115376741|ref|ZP_01463967.1| ribonuclease Z [Stigmatella aurantiaca DW4/3-1] gi|310824834|ref|YP_003957192.1| ribonuclease z [Stigmatella aurantiaca DW4/3-1] gi|115366228|gb|EAU65237.1| ribonuclease Z [Stigmatella aurantiaca DW4/3-1] gi|309397906|gb|ADO75365.1| Ribonuclease Z [Stigmatella aurantiaca DW4/3-1] Length = 307 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 41/178 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A+ PT +N +S ++ + ++ D G Sbjct: 4 LRLTFLGTSAAQ-------------PTLHRN--------LSGLAVKADADLLLFDCGEGS 42 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQK-----RPIDVYAAPDCMKHL 118 Q++R +++AV +TH HADH GI G+ PI +Y P + L Sbjct: 43 QRQMVRFGTGFTVEAVFFTHFHADHYLGI---IGFLRTLGMMGREHPIQLYGPPPARRLL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 ++ +D ++P V +++ D ++ +G ++A+ + RI++LG+ Sbjct: 100 HQA---VHLGVDTLSFP--VEIHELKDGD---RVRRSGYSVQAVGVDH---RINALGY 146 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 6/60 (10%) Query: 217 HFSLSESLKKIELINPKNAILTHMH--VDLDYDMVLKSTPSR----VVPAFDGMQFSSPI 270 H + E+ + + ILTH+ D D +L V A DG+ P+ Sbjct: 246 HSTAREAARVARDAGARRLILTHLSSRHDTDPSKLLGQAREEYTGPVEVAHDGLTVELPL 305 >gi|269836351|ref|YP_003318579.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269785614|gb|ACZ37757.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 554 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 75/216 (34%), Gaps = 41/216 (18%) Query: 53 NTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V++D G F + +R E+V + +L TH H DHI G+ L Sbjct: 28 GDLVMIDAGAKFPEEEMRGVDLIVPDITYVKERVDRLRGILITHGHEDHIGGLPYLLP-Q 86 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + PI +Y + + Y LD+ + V+E Sbjct: 87 LKSRAPIPLYGSA-------LAMAYAEAKLDEAGVLDLAEFHVVEPGQ--HYQLGRYLTA 137 Query: 160 EAIPILQQHGRISSLGFR--FGNVAYCTDVNAFP---------AESLEKL--QNLDFLII 206 E +P+ ++ R G + D P L +L + + L+ Sbjct: 138 EFVPVTHSIPGSFAVALRTPLGWAVHTGDFKFDPTPPLGPPTDEARLRELGNEGVLLLLS 197 Query: 207 DAL---KNGLHSSHFSLSESL-KKIELINPKNAILT 238 DA+ + G S +SE+L + I +LT Sbjct: 198 DAVRVERPGHTPSEAVVSETLYRVIGEAK-GRVVLT 232 >gi|163792586|ref|ZP_02186563.1| ribonuclease Z [alpha proteobacterium BAL199] gi|159182291|gb|EDP66800.1| ribonuclease Z [alpha proteobacterium BAL199] Length = 295 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 75/219 (34%), Gaps = 39/219 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G C +R + + + +V+VD G Sbjct: 1 MKVTLLGTG-----------CPQC-----HTKRYGPANLVRH-----GSVSVLVDCGSGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKH--- 117 +++ +DAVL TH H+DH+ + L Q R P+ +Y + Sbjct: 40 TQRLVGAGSPGGKLDAVLLTHLHSDHLVDLYQLIVSGWHQGRTTPLRIYGPKGTRAYVDG 99 Query: 118 ---LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L++ R A + R V+E + P+ + G + A+ + + + Sbjct: 100 LLALWKDERELRIAHEQRPSSAGFTAEVMEYAEGPV-VDLPGLSVTAVKVDHR-PVEEAY 157 Query: 175 GFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 GF F + D PA + + D LI + Sbjct: 158 GFVFRADDGSTAVFSGDTRYCPAL-IRAARGADVLIHEC 195 >gi|53719866|ref|YP_108852.1| hypothetical protein BPSL2256 [Burkholderia pseudomallei K96243] gi|53723771|ref|YP_103296.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] gi|67642967|ref|ZP_00441717.1| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] gi|76809136|ref|YP_334082.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] gi|121600703|ref|YP_993490.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126449138|ref|YP_001080998.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|126453263|ref|YP_001066870.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|134277726|ref|ZP_01764441.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|167001774|ref|ZP_02267566.1| metallo-beta-lactamase family protein [Burkholderia mallei PRL-20] gi|167739304|ref|ZP_02412078.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 14] gi|167816519|ref|ZP_02448199.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 91] gi|167824913|ref|ZP_02456384.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 9] gi|167846431|ref|ZP_02471939.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei B7210] gi|167895010|ref|ZP_02482412.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 7894] gi|167903395|ref|ZP_02490600.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei NCTC 13177] gi|167911648|ref|ZP_02498739.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 112] gi|167919646|ref|ZP_02506737.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei BCC215] gi|226198923|ref|ZP_03794486.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|237812981|ref|YP_002897432.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|242318101|ref|ZP_04817117.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|254178289|ref|ZP_04884944.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] gi|254184400|ref|ZP_04890990.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|254191433|ref|ZP_04897937.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254195938|ref|ZP_04902364.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] gi|254200250|ref|ZP_04906616.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|254209328|ref|ZP_04915674.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|254261141|ref|ZP_04952195.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] gi|254297065|ref|ZP_04964518.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|254358002|ref|ZP_04974275.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] gi|52210280|emb|CAH36259.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|52427194|gb|AAU47787.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 23344] gi|76578589|gb|ABA48064.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710b] gi|121229513|gb|ABM52031.1| metallo-beta-lactamase family protein [Burkholderia mallei SAVP1] gi|126226905|gb|ABN90445.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106a] gi|126242008|gb|ABO05101.1| metallo-beta-lactamase family protein [Burkholderia mallei NCTC 10247] gi|134251376|gb|EBA51455.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 305] gi|147749846|gb|EDK56920.1| metallo-beta-lactamase family protein [Burkholderia mallei FMH] gi|147750101|gb|EDK57172.1| metallo-beta-lactamase family protein [Burkholderia mallei JHU] gi|148027129|gb|EDK85150.1| metallo-beta-lactamase family protein [Burkholderia mallei 2002721280] gi|157807173|gb|EDO84343.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 406e] gi|157939105|gb|EDO94775.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pasteur 52237] gi|160699328|gb|EDP89298.1| metallo-beta-lactamase family protein [Burkholderia mallei ATCC 10399] gi|169652683|gb|EDS85376.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei S13] gi|184214931|gb|EDU11974.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1655] gi|225929023|gb|EEH25047.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei Pakistan 9] gi|237506604|gb|ACQ98922.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei MSHR346] gi|238524198|gb|EEP87632.1| metallo-beta-lactamase family protein [Burkholderia mallei GB8 horse 4] gi|242141340|gb|EES27742.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1106b] gi|243062466|gb|EES44652.1| metallo-beta-lactamase family protein [Burkholderia mallei PRL-20] gi|254219830|gb|EET09214.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 1710a] Length = 258 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + + +V +DA+L TH H DH+ Sbjct: 14 ALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYTSWGTARAV------------------GADEADVDLHVLWSDETAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEA 166 >gi|227891089|ref|ZP_04008894.1| ribonuclease Z [Lactobacillus salivarius ATCC 11741] gi|227866963|gb|EEJ74384.1| ribonuclease Z [Lactobacillus salivarius ATCC 11741] Length = 317 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 79/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S ++ + D G Sbjct: 1 MELEFLGTG-----------------AGSPSKSRNVSA-VALKLLDEIKKIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYAAPDCMKHL 118 Q+L + ID + TH H DHI G+ G R + +K P+ +Y + Sbjct: 43 QHQILNTTIRPRKIDKIFITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTIYGPKGISDFV 102 Query: 119 ----------------------------FESFR-YCFK----------ALDDRTYPPIVN 139 + F+ Y +K ++++ YP + Sbjct: 103 NISLKVSQTKLSYELNFVELEEEGLLLENDRFKVYAYKLDHRIECWGYRIEEKDYPGELQ 162 Query: 140 PIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA-YCTDVNAFPAES 194 + VP AG V+ G+ + G + D P Sbjct: 163 VEKLREAKVPSGPIYGRLKAGEVVTLEDGRTIDGKDFIGKAKKGRIVTILGDTRQTPNLK 222 Query: 195 LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L ++ + L+ ++ L H H + ++ + + K +LTH+ Sbjct: 223 L-LAKDAEVLVHESTFGKGEGKLARNYH--HSTCVQAATLAKEVGVKQLLLTHIS 274 >gi|89092643|ref|ZP_01165596.1| cAMP phosphodiesterase class-II [Oceanospirillum sp. MED92] gi|89083155|gb|EAR62374.1| cAMP phosphodiesterase class-II [Oceanospirillum sp. MED92] Length = 230 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 43/214 (20%) Query: 53 NTTVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPID 107 + +++VD G Q+L +I V+ TH H DHI G+ + + + K PI+ Sbjct: 2 DDSLLVDAGTGIELLNMEQML-----AIRDVVITHAHIDHIIGLPLMLATIYDQHKEPIN 56 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTY------PPIVNPIVIENNDVPICMKSAGGVIEA 161 +YA P+ ++ L + + F Y PI++ I D ++ G IEA Sbjct: 57 LYALPEVIEALEQ---HIFNWTIWPDYTCLPEERPIISLHKINVGD---TLELQGKKIEA 110 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL--QNLDFLIIDAL------ 209 +P ++G+ + A+ D + L + D LIID Sbjct: 111 LPANHP---TPTVGYLVSDENTSFAFSGD-SGINDVLWPILNDRKPDLLIIDVSFTDEVD 166 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + H + L++ L+++E ++TH+ Sbjct: 167 ELARLSGHLTPSHLADQLQQLEHHA--RIMITHL 198 >gi|325690509|gb|EGD32512.1| ribonuclease Z [Streptococcus sanguinis SK115] Length = 309 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 88/295 (29%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRF------------GNVAYCTDVNAFPA 192 +++AG + ++G+ L G + +A D A Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPRPGKTIAILGDTRK-TA 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ D L+ +A K + H + ++ + + K +L H+ Sbjct: 222 ASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|117924248|ref|YP_864865.1| beta-lactamase domain-containing protein [Magnetococcus sp. MC-1] gi|117608004|gb|ABK43459.1| beta-lactamase domain protein [Magnetococcus sp. MC-1] Length = 251 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 85/249 (34%), Gaps = 46/249 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 TILG G GVP + + +++D G Sbjct: 1 MRLTILGSGT--GVPLPEHQ--------------PPGYWVQSLG-----CQLLMDCGSGS 39 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDC-MKHLF 119 + + L ++++D V +H H DH + L +R +Y Sbjct: 40 VWRLTALGGSLVTLDGVAISHTHPDHCGDLLTLLHALHLPGMQRDKPLYLFGPTGFAAFL 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS-SLGFRF 178 E F F+ P +V++ N + + G + QH + ++G+R Sbjct: 100 EQF--IFQQTKK----PKGFALVVQENPQAVRL----GDLSLSSAPMQHSTSTAAIGYRV 149 Query: 179 ----GNVAYCTDVNAFPAESLEKLQN-LDFLIIDA--LKNGLHSSHFSLSESLKKIELIN 231 G + Y D A P+ +L L + D + D L G + H S + + + Sbjct: 150 TSQGGTLVYSGD--AEPSAALIGLSDAADLAVFDCSTLAQGQVAGHMSALQCGEVAQQAG 207 Query: 232 PKNAILTHM 240 K IL+H+ Sbjct: 208 VKRLILSHL 216 >gi|319954399|ref|YP_004165666.1| rnase z [Cellulophaga algicola DSM 14237] gi|319423059|gb|ADV50168.1| RNAse Z [Cellulophaga algicola DSM 14237] Length = 301 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 96/331 (29%), Gaps = 97/331 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ +S + N ++D G Sbjct: 1 MKLTILG----------------CYAATPRTMTNPTSQVLEI-----KNQMFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 +Q+ + ++ I+ + +H H DH G+ GL F R + +Y + + Sbjct: 40 QVQLRKHKIRFSKINHIFISHLHGDHFFGLPGLVSTFRLLGRDTEMHIYGPKGIEEAIN- 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 L + + + + + + + ++ IP+ R+ + GF F Sbjct: 99 ----LLLKLGNSWTNYKLIFHELTSKESELIYEDDKVTVKTIPLNH---RVYTNGFLFQE 151 Query: 180 -----------------NVAY-----------CTDVNAFPAESL---------------- 195 V Y D P + L Sbjct: 152 KLSSRTLDIEAVESYGIEVCYYQNIKNGRDITLDDGRVIPNDELTFDPPKPKSYAFCSDT 211 Query: 196 -------EKLQNLDFL-----IIDALKN-GLHSSHFSLSESLKKIELINPKNAILTHM-- 240 ++ +D L ++ + H + E+ + N IL H Sbjct: 212 AYKPDIVPLIKGVDVLYHESTFLETQAELAPKTKHSTAKEAAAIAKQANVGQLILGHYST 271 Query: 241 ---HVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +DL + L+ +V+ A DG F+ Sbjct: 272 RYKSIDLFKEEALEVF-DKVLLADDGKVFNF 301 >gi|307244737|ref|ZP_07526839.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] gi|306491914|gb|EFM63965.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] Length = 266 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 79/235 (33%), Gaps = 50/235 (21%) Query: 53 NTTVIVDTG-PDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T +++D G ++ + + + + TH H+DHI G+ L +K + Sbjct: 22 DTNILIDAGLSGKRISKGLENIDVDISKLRGIFVTHEHSDHIKGLG-----VLSRKYDLP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y L ++ ++I +ND + G + P Sbjct: 77 IYLNYKTWLALESKIGKIKES-----------NVMIFDNDKAYDL----GDMCIKPFSIN 121 Query: 168 HGRISSLGF-----RFGNVAYCTDVNAFPAESLEKLQNLDFLIID--------------- 207 H +GF + ++ TD + + ++++ Sbjct: 122 HDAADPVGFSLFNEKEEKLSIATDTGHISEDVRANILGSKLVVLESNYDKEMLLMGSYTY 181 Query: 208 ALKNG--LHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 ALK ++ H S ++ K + + +L H+ + ++ + T + + Sbjct: 182 ALKKRVMSNTGHLSNEDAAKFAVDLIKNGTEEILLAHLSRENNFPALAYETSNHI 236 >gi|302545018|ref|ZP_07297360.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptomyces hygroscopicus ATCC 53653] gi|302462636|gb|EFL25729.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptomyces himastatinicus ATCC 53653] Length = 250 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 48/217 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSAESAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-------IDVYAAPDCMK 116 ++ R + +DAV+ +H H DH ID + + R I VY D + Sbjct: 40 LGELQRHCGLYDLDAVILSHLHPDHC--IDMCAYFVARYYRHDGGRAEAIPVYGPEDTER 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L +++ D+++ + + + G H + + GF Sbjct: 98 RLVQAYD---DVPDEKSMQEVFDFRTLTPG------TFELGPFTIRTARVCH-PVEAFGF 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDA 208 R + + Y D P E+L L + D + +A Sbjct: 148 RIEHGDRALVYSGDTG--PCEALTDLARGADLFLCEA 182 >gi|110802160|ref|YP_699862.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110682661|gb|ABG86031.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 263 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 55/250 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSERTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 ++ H ++S G+ + + TD+ F E L ++ + +++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKHKGKSASIATDIGTFTEEILRNIRESEVILLESNHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVL 250 +K G + H S + K I I + IL H+ + + Sbjct: 169 VQMVKFGPYPYELKRRVLSEVGHLSNEDCGKAIVDIMNHDKHRKIILGHLSNTNNVPELA 228 Query: 251 KSTPSRVVPA 260 + V+ A Sbjct: 229 EQAVINVLSA 238 >gi|108800809|ref|YP_641006.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119869949|ref|YP_939901.1| beta-lactamase domain-containing protein [Mycobacterium sp. KMS] gi|126436407|ref|YP_001072098.1| beta-lactamase domain-containing protein [Mycobacterium sp. JLS] gi|108771228|gb|ABG09950.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119696038|gb|ABL93111.1| beta-lactamase domain protein [Mycobacterium sp. KMS] gi|126236207|gb|ABN99607.1| beta-lactamase domain protein [Mycobacterium sp. JLS] Length = 257 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 78/248 (31%), Gaps = 42/248 (16%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S ++ +++D G Sbjct: 4 RITVLGCSGS----VVGPDSPA------------SGYLVTAPDTPP----LVLDFGGGVL 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAAPDCMKHLFES 121 + R + VL +H HADH + GL + P +Y + L + Sbjct: 44 GALQRHADPNSVYVLLSHLHADHCLDLPGLFVWRRYHPSPAPDRGVLYGPANTWARLGAA 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + + I + + N ++ G + +P L H S G R + Sbjct: 104 -----SSPEGGEIDDISDIFEVRNWSDNSAVQ--IGALSVLPRLVCHPT-ESYGMRLTDP 155 Query: 181 ----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINP 232 Y D F +E + D + +A H S +E+ + L Sbjct: 156 SGATFVYSGDT-GFCDPLIELARGADVFLCEASWTHSPEHPPGLHLSGTEAGRAAALAGV 214 Query: 233 KNAILTHM 240 +LTH+ Sbjct: 215 GELLLTHI 222 >gi|225870883|ref|YP_002746830.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225700287|emb|CAW94546.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 270 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 26 PKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMA-----RKYNL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I N V + + G I+ Sbjct: 81 DVYANEKTWQMIDERHM-------------IGNLDVAQKHVFERGKTMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L+ G + Sbjct: 128 SHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAGIIENADGYLIESNHDVEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 188 SLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVNQL 243 >gi|126441460|ref|YP_001059589.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] gi|126220953|gb|ABN84459.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 668] Length = 258 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + + +V +DA+L TH H DH+ Sbjct: 14 ALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYTSWGTARAV------------------GADEADVDLHVLWSDETAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEA 166 >gi|288960732|ref|YP_003451072.1| pyrroloquinoline quinone biosynthesis protein B [Azospirillum sp. B510] gi|288913040|dbj|BAI74528.1| pyrroloquinoline quinone biosynthesis protein B [Azospirillum sp. B510] Length = 310 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 104/328 (31%), Gaps = 82/328 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 +LG A G P+ C + RT+SSL ++ ER ++++ Sbjct: 1 MKILVLGSAAGGGFPQWNCACAGCRRARSGDPAAKPRTQSSLAVTADGERW----LLLNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L L I A L T+ DH+ G+ L++ P +YA Sbjct: 57 SPDLGAQLLANPQLHPTGGLRGNPISAALLTNADIDHVAGL-----LTLRESHPFSIYAT 111 Query: 112 PDCMKHLF--ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L F L R + P D + G +EA + G Sbjct: 112 TRVHGVLAGNSVFNVLNPDLVARRQMALGEPFEPTGADG----RPLGLEVEAFAVP---G 164 Query: 170 RI------SSLGFRFGNVA-------------------YCTDVNAFPAESLEKLQNLDFL 204 ++ +S G FG+VA Y A P ++L + Sbjct: 165 KVALYLEDASAGPGFGSVAEDTVAVRIRPSDGSGDGFFYIPGCAALPGWLADRLFGAALV 224 Query: 205 IIDA--------LKNGLHSS------HFSL---SESLKKIELINPKNAILTHMHVDLDYD 247 + D ++NG H + S+ ++ I H++ Sbjct: 225 LFDGTTWTDDEMIRNGTGVKTAGRMGHMPMSGPEGSIAAFAPLSVARKIYIHINNTNP-- 282 Query: 248 MVLKSTPS-------RVVPAFDGMQFSS 268 +L+ +P A DG++ + Sbjct: 283 ALLEDSPERAEAEAAGWRIAHDGLELTL 310 >gi|313201535|ref|YP_004040193.1| beta-lactamase domain-containing protein [Methylovorus sp. MP688] gi|312440851|gb|ADQ84957.1| beta-lactamase domain protein [Methylovorus sp. MP688] Length = 257 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 29/165 (17%) Query: 53 NTTVIVDTGPDFY---MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +TT+++D G ++ R + S++ +L TH H DH G+ L F I Sbjct: 21 DTTLLLDCGFGLRDAIHRLQRAGISPESLNGILVTHEHDDHAGGVFKLANKFG-----IP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++ + R + VI+++ VP ++ G P Sbjct: 76 IWLTHGTFTMVERLMP------KQRGF----ELHVIDSH-VPFTIQDLG----VNPFPVP 120 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + + F + + TD L L+++ Sbjct: 121 HDAREPVQYTFDDGNTKLGVLTDTGTSTPHIEAMLSGCHGLVLEC 165 >gi|283131372|dbj|BAI63376.1| metal-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis] Length = 259 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKEISPLDLDAVIVSHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y + D + + P V E + G Sbjct: 81 KHLWEPKVLPIYGHDE----------------DRHEFAKLSIPDVSEGKAYDVTGVERIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + FR + + D + + + + D + D Sbjct: 125 PFDITFLKTVH-PVVCYAFRIVERATGQVLVFTGD-SGYFEGLADFAKEADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ K +LTHM Sbjct: 183 EGNENHMAHLTSKEAGLMASQAGVKKLVLTHM 214 >gi|258510650|ref|YP_003184084.1| ribonuclease Z [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477376|gb|ACV57695.1| ribonuclease Z [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 313 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 92/325 (28%), Gaps = 80/325 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G P RR + I+ R +T + D G Sbjct: 1 MELIFLGTGA--GAPS---------------RRRNVTA-IALRLTRDDSTVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAP------- 112 ++ +D V TH H DHI G+ GL R + P+ +Y P Sbjct: 43 QHRMFDAPFGPNRVDRVFITHLHGDHIFGLPGLLSTRSFPENVG-PLRLYGPPGIRAFVR 101 Query: 113 DCMKHLFESFRY--CFKALDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPIL--QQ 167 + Y F P+ + + + S G +E P Sbjct: 102 ATLDGSQTHLSYEIQFHEWTSPEPAPVREGLYTVRAALLDHAIPSYGYRVEEAPFPGRLH 161 Query: 168 HGRISSLG---------FRFGNVAYCTDVNAF-------PAE----------------SL 195 R+ + G + G D PAE ++ Sbjct: 162 ADRLRAEGLQPSPLWSQLKAGEDVTLPDGRRLRAADFVDPAEPGRVIAILGDTRPCKAAV 221 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 E + D L+ +A H+ H + ++ + K ILTH+ + Sbjct: 222 ELARGADCLVHEATFLDRHAHLASAFFHSTARQAAEIAREAEAKCLILTHVSARYERAEE 281 Query: 250 LKSTPS------RVVPAFDGMQFSS 268 + + A DGM + Sbjct: 282 DEILAEARAVFPNTLLAHDGMVYEI 306 >gi|157151193|ref|YP_001450284.1| ribonuclease Z [Streptococcus gordonii str. Challis substr. CH1] gi|189043794|sp|A8AWX4|RNZ_STRGC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157075987|gb|ABV10670.1| metallo-beta-lactamase superfamily protein [Streptococcus gordonii str. Challis substr. CH1] Length = 309 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ I++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDIEIYGPKGIKNFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + N + +++ H I + Sbjct: 103 MSSLR---------VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRI 154 >gi|300856328|ref|YP_003781312.1| putative phage-like hydrolase [Clostridium ljungdahlii DSM 13528] gi|300436443|gb|ADK16210.1| putative phage-related hydrolase [Clostridium ljungdahlii DSM 13528] Length = 242 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 85/264 (32%), Gaps = 79/264 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G+S L + + T+I++ G + Sbjct: 1 MKLKVLGSGSSG----------------------NCYLL------QNKDETLIIECGLSY 32 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + L + ++ L +H H DH ++ + IDVY + + +K + Sbjct: 33 KTILKGLNFDLRNVVGCLISHEHKDHSKAVNDVLN------NAIDVYTSEETLKAI---- 82 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 + + Y + + + G +PI QH LGF Sbjct: 83 -------NIKNYRAKI---------IRAEEQFNIGQFTILPIKTQHDAADPLGFLIYHSD 126 Query: 178 FGNVAYCTD-------VNAFPAESLEKLQNLDF--------LIIDALKNGLHSSHFSLSE 222 FG + + TD + +E ++D L+ L N L SHFS Sbjct: 127 FGKMLFITDSYYCQYKFSGLNHIMIECNYSMDILNRNIEAGLVHSVLANRLLKSHFSFDN 186 Query: 223 SLKKIE---LINPKNAILTHMHVD 243 + ++ L K +L H+ D Sbjct: 187 VKEFLKVTDLSKTKEIVLLHLSND 210 >gi|168186921|ref|ZP_02621556.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] gi|169295165|gb|EDS77298.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] Length = 240 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 84/265 (31%), Gaps = 85/265 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G+S L +G T+I++ G + Sbjct: 1 MKLKVLGSGSSG----------------------NCYLL------QGKEETLILECGLPY 32 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + L ++ ++ L TH H DH + L + IDVY + + Sbjct: 33 KTILKGLNFKIGNVVGCLVTHEHKDHSKAANDLI------RNGIDVYLSQGTAAGIE--- 83 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----- 177 F ++ +++ G +P +H LGF Sbjct: 84 ---FIDINRS----------HRIHEIKSEKVFKIGEFIILPFKTEHDANEPLGFLIYHKD 130 Query: 178 FGNVAYCTD---VNAFPAESLEKLQNLDFLIIDA---------------LKNGLHSSHF- 218 G V + TD K Q++D ++++ LKN + SHF Sbjct: 131 IGQVLFITDSYYCKY-------KFQDVDHILVECNYSSEILEQRELPKTLKNRIVKSHFE 183 Query: 219 --SLSESLKKIELINPKNAILTHMH 241 ++ E LK +L K +L H+ Sbjct: 184 LENVKEFLKATDLKKTKEIVLIHLS 208 >gi|124027120|ref|YP_001012440.1| ribonuclease Z [Hyperthermus butylicus DSM 5456] gi|123977814|gb|ABM80095.1| ribonuclease Z [Hyperthermus butylicus DSM 5456] Length = 245 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 87/272 (31%), Gaps = 42/272 (15%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +G + GVP KN + + + +++D GP ++ Sbjct: 4 FIGTAGAGGVP-----------GRAKN-----CILV-----DTGDARLLLDVGPGCVERL 42 Query: 69 --LREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 L +D + +H H DH G+ +R +P + A L Sbjct: 43 YELGYSACDVDYIYISHLHMDHWSGLFDYAVRYSVEGCSQPPTLLAGEKVRDQLSSVIET 102 Query: 125 CFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 L I +E + + I + A + A + G + Y Sbjct: 103 LPGRLRGEVGARSIPASGGLELDGMLIRVYEAVHTLPAYTVEV-----IVDG---STLVY 154 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKN-AI 236 D + E D L+++A + H ++ E+ + + + + Sbjct: 155 SGDT-GPTGKLRELASRTDLLVVEASMPRGMEVKARETGHHTVDEAAAYRDQMRSEALLV 213 Query: 237 LTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 LTH+ + D+ P RV+ A DG+ S Sbjct: 214 LTHLTRESLEDIRRHGLPRRVIAASDGLVLSI 245 >gi|70728838|ref|YP_258587.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens Pf-5] gi|68343137|gb|AAY90743.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens Pf-5] Length = 252 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++LR V + A+L TH HADH+HG+ L ++ + Sbjct: 20 ADTCVLVDCGFSLRETERRLLRLGVDPAQLSAILVTHEHADHVHGVGLLS-----RRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ + + G + I Sbjct: 75 PVYLSQGTLRGMRK---------------PVEVAGFVRGGE-----SLQIGALRIDVIAV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H F F + TD+ ++ A L+ + LD L+I+A L G + Sbjct: 115 AHDAQEPTQFVFSDGQRRFGLLTDLGSYCAGVLDGYRGLDALMIEANHCRDRLARGYYPY 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGGDLGHLNNHQAASLVAELGWQDLQHLVLAHLS 213 >gi|257414083|ref|ZP_05591894.1| ribonuclease Z [Roseburia intestinalis L1-82] gi|257201312|gb|EEU99596.1| ribonuclease Z [Roseburia intestinalis L1-82] Length = 319 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 85/287 (29%), Gaps = 81/287 (28%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R + +++++D G + ++E+ ID + +TH HADHI G+ GL +R Sbjct: 39 RYNGSSLLIDCGEGTQI-AIKEKGWTFKPIDVICFTHYHADHISGLPGLLLSMGNAERTE 97 Query: 107 DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + P ++ + + R L IE + ++ G I A Sbjct: 98 PLTMIGPKGLERVVGALRMIAPELP-------FEIRYIEIMEPEADIEINGYHIHA--FR 148 Query: 166 QQHGRISSLGF-----RFGNVA-------------------------------------- 182 H I+ G+ R G + Sbjct: 149 VNH-NITCYGYTVEIRRAGRFSVEHAKEREIPQKYWNRLQKGEEIETEDGAHYTPDMVLG 207 Query: 183 ---------YCTDVNAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLK 225 YCTD P ESL +N D LI + + H + E+ + Sbjct: 208 AARKGIKVTYCTDTR--PTESLVASAKNSDLLICEGMYAEKEKIAKAKQYKHMTFYEAAE 265 Query: 226 KIELINPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH DY ++ DG Sbjct: 266 VAKKAEVAEMWLTHFSPSLVHAEDYMPQVREIFPNAFLGKDGKSVEL 312 >gi|327470776|gb|EGF16232.1| ribonuclease Z [Streptococcus sanguinis SK330] Length = 309 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 87/295 (29%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ + +Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLAIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRF------------GNVAYCTDVNAFPA 192 +++AG + ++G+ L G + +A D P Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPRPGKTIAILGDTRKTP- 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ D L+ +A K + H + ++ + + K +L H+ Sbjct: 222 ASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|33861905|ref|NP_893466.1| hypothetical protein PMM1349 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|41017538|sp|Q7V0B9|RNZ_PROMP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|33640273|emb|CAE19808.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 312 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T R SSL + + + D G Sbjct: 1 MNITFLGT--SSGVPTLT--------------RNVSSLALKL---SQTAEVWLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I++Y + + Sbjct: 42 QHQLMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSNGIEIYGPSELKSFVTS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F L ++P + +E+ + ++ +H R+ + G+R Sbjct: 102 ALESSFCKL---SFP--LRFRAVEDFASLNKILFENDKLKVHCACLKH-RLPAYGYRV 153 >gi|330959286|gb|EGH59546.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 252 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAASQLSAILVTHEHADHVHGVGLLS-----RRYDV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGFFAGGE-----SVQIGSLDIEVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFNDGERRFGLLTDLGSYCSNVLQRYHGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|15672377|ref|NP_266551.1| hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|12723268|gb|AAK04493.1|AE006276_8 hypothetical protein L582 [Lactococcus lactis subsp. lactis Il1403] gi|326405971|gb|ADZ63042.1| beta-lactamase superfamily Zn-dependent hydrolase [Lactococcus lactis subsp. lactis CV56] Length = 270 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 73/219 (33%), Gaps = 47/219 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + + IDA+L TH H+DHI GI L +K I Sbjct: 26 PKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIG-----VLARKYGI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA D L + + P+ + E G I+ Sbjct: 81 DLYANEDTWSEL--------DSKNALGKIPVEQKHLFEMGK-----TMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I+ +RF + TD ++N D +L+ I+ L+ G + Sbjct: 128 SHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEILRMGAYPW 187 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S + + I K L H+ Sbjct: 188 RTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLS 226 >gi|255009779|ref|ZP_05281905.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] gi|313147568|ref|ZP_07809761.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] gi|313136335|gb|EFR53695.1| metallo-beta-lactamase domain-containing protein [Bacteroides fragilis 3_1_12] Length = 246 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 55/218 (25%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 + + + L TH H DH I+ + K + VYA+ ++ Sbjct: 38 AIDFNLQKVAGCLITHEHKDHCKAINEVL------KTSVPVYASAGTIQ----------- 80 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GNVA 182 ++ + Y E + + G + +P +H G+ GNV Sbjct: 81 TMNGQGY--------HEPHPLEAGKVYMIGRFKVLPFHTKHDCAEPFGYLIQHEETGNVL 132 Query: 183 YCTDVNAFPAESLEKLQN--------LDFL--------IIDALKNGLHSSHFSLS---ES 223 + TD P + L N LD L I AL++ SH S ++ Sbjct: 133 FATDTYYLPNR-FQNLSNVLIEANYRLDILERNIAEGRIPKALRDRTLQSHMSFDTCRDA 191 Query: 224 LKKIELINP-KNAILTHMHVDLDYDMVLKSTPSRVVPA 260 L + N +L H+ D + + A Sbjct: 192 L-LSNDLKAVNNIVLIHLS---DGNSNAAEFREGIHQA 225 >gi|300709170|ref|XP_002996752.1| hypothetical protein NCER_100128 [Nosema ceranae BRL01] gi|239606075|gb|EEQ83081.1| hypothetical protein NCER_100128 [Nosema ceranae BRL01] Length = 578 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 47/259 (18%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 KD + T LG G ++ P R S L +S S + D G Sbjct: 308 KDSFVLT-LGSGCAI----------------PSKYRNVSCLLVSIKS-----KVFLFDCG 345 Query: 62 PDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 D Q+LR + I + +H H DH G+ L K K ++++A + Sbjct: 346 EDSLNQLLRLNGSYKVLQKIGTIFISHSHGDHNLGLINLLS---KIKHKVNLFAPQCILD 402 Query: 117 --HLFESFRYCFKALD----DRTYPPIVNPIVIENNDVPICMKSAGGV-IEAIPILQQHG 169 LF CF ++ Y V+ I+N + + + V I Sbjct: 403 FVSLFNENIKCFATDSAKELEQNYYKSVDKKSIDNYILHFTLDNFVFVSICGCKHNLDSC 462 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLH------SSHFSLSE 222 +S ++ ++Y D P+ + N D LI ++ + + ++H +L++ Sbjct: 463 SVSIE-YKNIKISYSGDTR--PSCLFADMACNSDILIHESTFDNENEEKAIKTNHSTLND 519 Query: 223 SLKKIELINPKNAILTHMH 241 + K +LTH Sbjct: 520 AYNIFLRSKSKVLLLTHFS 538 >gi|281490937|ref|YP_003352917.1| beta-lactamase superfamily Zn-dependent hydrolase [Lactococcus lactis subsp. lactis KF147] gi|281374695|gb|ADA64215.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] Length = 270 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 73/219 (33%), Gaps = 47/219 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + + IDA+L TH H+DHI GI L +K I Sbjct: 26 PKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIG-----VLARKYGI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA D L + + P+ + E G I+ Sbjct: 81 DLYANEDTWCEL--------DSKNALGKIPVEQKHLFEMGK-----TMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I+ +RF + TD ++N D +L+ I+ L+ G + Sbjct: 128 SHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMRGTIENADAYLMESNHDIEILRMGAYPW 187 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S + + I K L H+ Sbjct: 188 RTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLS 226 >gi|229000250|ref|ZP_04159819.1| hypothetical protein bmyco0003_48030 [Bacillus mycoides Rock3-17] gi|229007773|ref|ZP_04165361.1| hypothetical protein bmyco0002_46520 [Bacillus mycoides Rock1-4] gi|228753481|gb|EEM02931.1| hypothetical protein bmyco0002_46520 [Bacillus mycoides Rock1-4] gi|228759582|gb|EEM08559.1| hypothetical protein bmyco0003_48030 [Bacillus mycoides Rock3-17] Length = 264 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Q + I +L TH H+DHI G+ L +K + Sbjct: 22 EKQKLLIDAGLSGKATEALFQQAELDIQDISGILVTHEHSDHIKGLG-----VLARKYQL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + P V DV G IE Sbjct: 77 PVYANEKTWSAMEHLIGNI----------PTDQKFVFSIGDVK-----TFGDIEVESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD ++ + + ++ L+ G + Sbjct: 122 SHDAAEPMFYAFHHNGRKLALITDTGYVSDRMKGIIKGANAFVFESNHDVEMLRMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I K+ L H+ +D Sbjct: 182 SIKRRILSDVGHVSNEDAALAMADVITDETKHIYLAHLSLD 222 >gi|225868180|ref|YP_002744128.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701456|emb|CAW98589.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 270 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 26 PKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMA-----RKYNL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I N V + + G I+ Sbjct: 81 DVYANEKTWQMIDERHM-------------IGNLDVTQKHVFERGKTMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI ++ L+ G + Sbjct: 128 SHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAGIIENADGYLIESNHDVEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 188 SLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVNQL 243 >gi|225011946|ref|ZP_03702384.1| ribonuclease Z [Flavobacteria bacterium MS024-2A] gi|225004449|gb|EEG42421.1| ribonuclease Z [Flavobacteria bacterium MS024-2A] Length = 301 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 35/179 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK-NRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG C P+ N+ T +S + ++D G Sbjct: 1 MKLTILG----------------CHSATPRENKHT-TSQLLEV-----GGNLFLIDCGEG 38 Query: 64 FYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLF 119 +Q+ ++ + I + +H H DH +G+ GL F R + +Y + + Sbjct: 39 TQIQLRKIKVKFSRIQHIFISHLHGDHFYGLIGLISTFRLLGRTAMLHIYGPKGIKEIIT 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + D YP ++ +E + + + +E +P+ RI + GF F Sbjct: 99 LQLKLAKSWTD---YP--LHFHELEQDSSQVVFEDETVRVETLPLDH---RIYTNGFLF 149 >gi|120610022|ref|YP_969700.1| beta-lactamase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588486|gb|ABM31926.1| beta-lactamase domain protein [Acidovorax citrulli AAC00-1] Length = 258 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 60/212 (28%), Gaps = 56/212 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G+S + G G ++VD G Sbjct: 2 LRFKNLGSGSSGNATVVEGRCGT------------------------QVRRLLVDCGLGP 37 Query: 65 YMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 R + IDA+ TH H+DH+ G+ + + I + + + Sbjct: 38 RQLAGRLGEAGLAIDDIDAIFITHEHSDHVGGLQKVA-----LRHRIPAWMSHGTYTAI- 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 P ++ ++ D G EA P H L R Sbjct: 92 --------------GAPDLDGLLHLTAD---GESIDLGAFEARPFTVPHDAREPLHLRCS 134 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIID 207 + + TD+ L L+ L+++ Sbjct: 135 DGATHIGLLTDLGHATEHVLAHLRGCHALLLE 166 >gi|302342335|ref|YP_003806864.1| beta-lactamase [Desulfarculus baarsii DSM 2075] gi|301638948|gb|ADK84270.1| beta-lactamase [Desulfarculus baarsii DSM 2075] Length = 268 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 72/238 (30%), Gaps = 53/238 (22%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKR 104 G ++VD G R + +D AV+ TH H DH G +R + Sbjct: 20 EGDGGAILVDAGLSARELQRRMAMAELDPGEIQAVVLTHEHGDHCRG---VRVLARRLG- 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V A P + + F+ PI +E + P Sbjct: 76 -VPVLATPKTWAQVQDKKGVAFE--------PIQAGQALEYC-----------GLHLQPF 115 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G G + CTD+ +L LI++A L G + Sbjct: 116 SVSHDAADPIGLTIGCGGARLGLCTDLGVATKLVQTRLGGCHALILEANHDPEMLSQGPY 175 Query: 215 SS-----------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVV 258 H S +S + + + +L H+ ++ + + VV Sbjct: 176 PPWLKQRVRSRVGHLSNHDSAQLLTELMHVGLGQVVLAHLSETNNFPELARRAAEGVV 233 >gi|326943260|gb|AEA19156.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 264 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + D+ G IE Sbjct: 75 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDLK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|303237057|ref|ZP_07323627.1| ribonuclease Z [Prevotella disiens FB035-09AN] gi|302482444|gb|EFL45469.1| ribonuclease Z [Prevotella disiens FB035-09AN] Length = 305 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P R + + ++D G +Q+ R ++ + AV +H H Sbjct: 11 CGSALPTLRHNATCQIVEVRG-----KLFMIDCGEGTQIQIRRSRIHFSKVQAVFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G+ F R P+ VYA + ++ S K L+ + + Sbjct: 66 GDHCFGLMGMLSTFGMTGRTNPLHVYAPKEFEQYFNLSMELFCKGLEYEVF-----FHCV 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E + + + IE++P+ RI GF F Sbjct: 121 ETTENKVIYEDKSITIESVPLEH---RIPCCGFLF 152 >gi|315221422|ref|ZP_07863343.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] gi|315189541|gb|EFU23235.1| metallo-beta-lactamase domain protein [Streptococcus anginosus F0211] Length = 267 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + + +DA+L TH H DHIHG+ L +K + Sbjct: 25 PKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + + V + + + G I+ Sbjct: 80 DIYANQETWNAME---------------VALGKIDVSQKHIFEMGKTKTFGDIDIESFGV 124 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++ +R + TD ++N D +LI I+ L++G + Sbjct: 125 SHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGIIENADGYLIESNHDIEILRSGAYPW 184 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + + I + K L H+ + Sbjct: 185 SLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKE 225 >gi|228942611|ref|ZP_04105143.1| hypothetical protein bthur0008_52380 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975541|ref|ZP_04136093.1| hypothetical protein bthur0003_52850 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982177|ref|ZP_04142466.1| hypothetical protein bthur0002_53310 [Bacillus thuringiensis Bt407] gi|228777529|gb|EEM25807.1| hypothetical protein bthur0002_53310 [Bacillus thuringiensis Bt407] gi|228784151|gb|EEM32178.1| hypothetical protein bthur0003_52850 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817037|gb|EEM63130.1| hypothetical protein bthur0008_52380 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 249 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + D+ G IE Sbjct: 60 DLPVYANEKTWNAMEHLIGNI----------PTEQKFIFSVGDLK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|320101558|ref|YP_004177149.1| beta-lactamase domain-containing protein [Isosphaera pallida ATCC 43644] gi|319748840|gb|ADV60600.1| beta-lactamase domain-containing protein [Isosphaera pallida ATCC 43644] Length = 256 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 63/206 (30%), Gaps = 21/206 (10%) Query: 52 SNTTVIVDTGPDFYMQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFL--- 100 +++D + L + ++AVL TH HADH+ G++ + Sbjct: 31 DGRWLLIDCPHPIRKMIHEAGQAAGLPFDLEQVEAVLITHLHADHVSGVEDFGFFNYFAL 90 Query: 101 --KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + I A L + + + PI E + + G Sbjct: 91 GRRARVVIHPELAGPLWDDLLAAGMGRMRFQAGEPFEPIDRERYFETIPLEPGQRLTLGP 150 Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGL 213 E H + G+R +A D AF L L N ++ + + Sbjct: 151 FEVESHPTTHS-LPCQGYRVTAAGRTLAVSGDT-AFDPVLLAWLTCNAHLIVHEVTTHDP 208 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H L++ + + L H Sbjct: 209 PGMHTHLTQLAALPSELR-ERLRLVH 233 >gi|297560868|ref|YP_003679842.1| beta-lactamase domain-containing protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845316|gb|ADH67336.1| beta-lactamase domain-containing protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 259 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 61/207 (29%), Gaps = 25/207 (12%) Query: 52 SNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----QKRP 105 + ++VD GP + R + + ++ TH HADH L + + Sbjct: 28 DDGVLLVDAGPGSLLAYRTRYGLDRLRGIVVTHLHADHSL---DLMAWAYRWTFPEVLPR 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALD-DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y + L +F F PI + + Sbjct: 85 IPLYYPEGEAERL-AAFDAVFGIPTLPTMNSPIAQSFEPREMAMDGTTRYEVAGASFRSF 143 Query: 165 LQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL----- 213 H + S RF + V++ +D + + + D + ++ Sbjct: 144 RAHHS-VPSAALRFEDPDGGRVVSFSSDT-GYCEAVVRAAEGADLFVCESTYLEADDQAL 201 Query: 214 -HSSHFSLSESLKKIELINPKNAILTH 239 H + + + + +LTH Sbjct: 202 TGHGHLTAAMAGDLAAEAGVDHLVLTH 228 >gi|291535714|emb|CBL08826.1| RNAse Z [Roseburia intestinalis M50/1] Length = 306 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 85/287 (29%), Gaps = 81/287 (28%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R + +++++D G + ++E+ ID + +TH HADHI G+ GL +R Sbjct: 26 RYNGSSLLIDCGEGTQI-AIKEKGWTFKPIDVICFTHYHADHISGLPGLLLSMGNAERTE 84 Query: 107 DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + P ++ + + R L IE + ++ G I A Sbjct: 85 PLTMIGPKGLERVVGALRMIAPELP-------FEIRYIEIMEPEADIEINGYHIHA--FR 135 Query: 166 QQHGRISSLGF-----RFGNVA-------------------------------------- 182 H I+ G+ R G + Sbjct: 136 VNH-NITCYGYTVEIRRAGRFSVEHAKEREIPQKYWNRLQKGEEIETEDGAHYTPDMVLG 194 Query: 183 ---------YCTDVNAFPAESL-EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLK 225 YCTD P ESL +N D LI + + H + E+ + Sbjct: 195 AARKGIKVTYCTDTR--PTESLVASAKNSDLLICEGMYAEKEKIAKAKQYKHMTFYEAAE 252 Query: 226 KIELINPKNAILTHMH----VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + LTH DY ++ DG Sbjct: 253 VAKKAEVAEMWLTHFSPSLVHAEDYMPQVREIFPNAFLGKDGKSVEL 299 >gi|150376065|ref|YP_001312661.1| pyrroloquinoline quinone biosynthesis protein PqqB [Sinorhizobium medicae WSM419] gi|150030612|gb|ABR62728.1| coenzyme PQQ biosynthesis protein B [Sinorhizobium medicae WSM419] Length = 303 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 102/312 (32%), Gaps = 63/312 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDT 60 +LG A G+P+ C +T+SSL +S E + + + Sbjct: 7 LRILVLGAAAGGGLPQWNCGCPNCAMARDPGSGLKPQTQSSLAVSLDGEAWA----VFNA 62 Query: 61 GPDFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 PD Q+ + L I++V+ T+ DH+ G+ L++K+ +++ Sbjct: 63 SPDIRQQIHANRPLQPRRLRHSPIESVVLTNGDIDHLAGL-----LVLREKQAFALFSTG 117 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP--------- 163 + + ++ F+ LD P +V+ IE + ++ G + A+P Sbjct: 118 AVGRIVADNP--VFQVLD----PELVSKRTIEIEETFSPLQGLGARLFAVPGKVPLFLEN 171 Query: 164 ------ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------- 209 + +H L V Y +L+N D + D Sbjct: 172 GEPDLGLEGEHTVGVELAAAGKRVYYVPGCAVMTDALAARLRNADAVFFDGTLYSDDEMI 231 Query: 210 ------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMV----LKSTPSR 256 K G H + SL + +N + I H++ + Sbjct: 232 QTGMGRKTGRRMGHMPIDGEGGSLDALGTLNIRRKIYVHINNTNPIWRAGSERERVEAQG 291 Query: 257 VVPAFDGMQFSS 268 +DGM+ Sbjct: 292 FEIGYDGMEVRL 303 >gi|317130922|ref|YP_004097204.1| ribonuclease Z [Bacillus cellulosilyticus DSM 2522] gi|315475870|gb|ADU32473.1| ribonuclease Z [Bacillus cellulosilyticus DSM 2522] Length = 304 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 90/303 (29%), Gaps = 74/303 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA G+P + S + + D G Sbjct: 1 MKVTFLGTGA--GIPA---------------KERNVSSIALHLHNDSLF--WLFDCGEAT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+++ +H H DHI G+ GL G Q P+ VY + Sbjct: 42 QHQILHTPIKLRKINSIFISHLHGDHIFGLPGLLGSRSFQGAETPLTVYGPVGIQHFIET 101 Query: 121 S---------FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV------------- 158 S + FK L++ N ++ + + S G Sbjct: 102 SLKVSTTYLKYPIHFKELENDGVIYEDNEYIVTTQLLEHGIDSYGFRVDQKEQAGSLLMD 161 Query: 159 ------IEAIPI---------------LQQHGRISSLGFRFGN-VAYCTDVNAFPAESLE 196 I PI HG + G VA D F + S+ Sbjct: 162 KVVAAGIPPGPILKDLKVGRSVTLQDGRVFHGEDFIGPPKKGKSVAVLGDT-RFSSRSIA 220 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + + L+ +A + H + E+ K +L + ILTH+ D + Sbjct: 221 LCKGVHTLVHEATFAHKDEQIAHEYFHATTEEAAKVAKLSRVEQLILTHISSRYQKDDMK 280 Query: 251 KST 253 + Sbjct: 281 QLL 283 >gi|270157510|ref|ZP_06186167.1| ribonuclease Z [Legionella longbeachae D-4968] gi|289164104|ref|YP_003454242.1| metallo-beta-lactamase family protein [Legionella longbeachae NSW150] gi|269989535|gb|EEZ95789.1| ribonuclease Z [Legionella longbeachae D-4968] gi|288857277|emb|CBJ11104.1| putative metallo-beta-lactamase family protein [Legionella longbeachae NSW150] Length = 358 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 79/259 (30%), Gaps = 56/259 (21%) Query: 28 CDPTNP----KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLY 81 C +P +N R + L + ++ D G + + I V Sbjct: 45 CGTGDPEVTMQNIRRPACLAM-----IADKHFMLFDAGEGASQTLASMGLPYAAIHNVFI 99 Query: 82 THPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKHLFESF--RYCFKALDDRTY 134 TH H+DH G+ + R PI+VY +K L +++ F+A + + Sbjct: 100 THWHSDHFSGLGQVINASWNNGRNQPINVYGPYGVQQVLKGLAKAYQLDVIFRASNSQGR 159 Query: 135 P------PIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG----NVAY 183 I + N+D + I+ H +LG+ + Sbjct: 160 LDPQLGFGIPKLVDAVNHDQTVYKVP---NIKITAFPVSHEPVYPALGYVINYKGCKIVI 216 Query: 184 CTDVNAFPAESLEKLQNLDFLI----------------------IDALKNGLHSS-HFSL 220 D + +N D LI +DA + + H Sbjct: 217 SGDTKVNSTLT-AHAKNADLLINEVLSNPLNQETYQQSMAKGNKLDAAFSLETKNYHSDS 275 Query: 221 SESLKKIELINPKNAILTH 239 E K + K+ +LTH Sbjct: 276 LELAKMAQQAKVKHLVLTH 294 >gi|167752350|ref|ZP_02424477.1| hypothetical protein ALIPUT_00594 [Alistipes putredinis DSM 17216] gi|167660591|gb|EDS04721.1| hypothetical protein ALIPUT_00594 [Alistipes putredinis DSM 17216] Length = 309 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 33/179 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG ++ P S +I +V E+ +VD G Sbjct: 2 SFSVTILGSASAKPTPD-----------------RHPSAQIVKVHEQ----HYLVDAGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF 119 Q+ R + + AV +H H DH+ G+ L ++ P+ ++ + L Sbjct: 41 AQQQMFRYGINPLKLRAVFISHLHGDHVFGLFPLISTLGLYGRRTPLKIFGPAPLGEMLG 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 RY D P + + ++ + ++ + ++P+ RI + G+ F Sbjct: 101 CHLRYF-----DTQLPYEIEWVEVDTTRHALLFENRTLEVWSVPLRH---RIPTSGYLF 151 >gi|21229043|ref|NP_634965.1| metal dependent hydrolase [Methanosarcina mazei Go1] gi|20907592|gb|AAM32637.1| metal dependent hydrolase [Methanosarcina mazei Go1] Length = 251 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 95/285 (33%), Gaps = 55/285 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++ P+ R +S + + R +++D G Sbjct: 1 MEITFLGTGVAI----------------PQKGRVQSGVMV-----RLEEKPLLIDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMK---HL 118 + +L +D VL +H H DH+ + L + + + +Y + Sbjct: 40 LSRFPDAGILHTNVDTVLLSHLHLDHVADLIPLVKANWLRGKTDMRIYGPDGTEDWFSTV 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ Y VN VIE + G E H + +L +R Sbjct: 100 LGAYEYILDG---------VNVDVIELSP-GKEFTPEGFDCEITCAAAAHS-VPTLAYRV 148 Query: 179 ----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKKIEL 229 G Y D + ++ D LI + K H++ +L+E L++ Sbjct: 149 TAEDGEFVYSGDTEPC-RDVMDLAVETDLLIHECSFPAGTKVTNHTTPVTLAEMLEEYN- 206 Query: 230 INPKNAILTHMHVDL-DYD-MVLKSTPSR----VVPAFDGMQFSS 268 + + LTH + ++ ++ + ++ A D M+ Sbjct: 207 MEIGSICLTHFYPEMRGHEREAVHRLKGYGDGEIILAEDLMRLEL 251 >gi|228477473|ref|ZP_04062109.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus salivarius SK126] gi|228250908|gb|EEK10096.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Streptococcus salivarius SK126] Length = 270 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 26 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + + ++ G I+ Sbjct: 81 DIYANEKTW-QIMDSKNMLGKIDNTQKHVFSRDKLL------------TFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +RF + TD ++N D +LI ++ L+ G + Sbjct: 128 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDVEILRAGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H + + I I K L H+ +L + + Sbjct: 188 STKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTMENQL 243 >gi|284046716|ref|YP_003397056.1| beta-lactamase [Conexibacter woesei DSM 14684] gi|283950937|gb|ADB53681.1| beta-lactamase domain protein [Conexibacter woesei DSM 14684] Length = 263 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 36/210 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------- 102 +++D G LRE ++DAV+ TH HADH L Y Sbjct: 37 DGVCLLLDCGNGV-FGKLREVHDYETVDAVVVTHLHADHCI---DLIPYSYALSYSPRAR 92 Query: 103 ---KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + +Y P F+ + P + + + G + Sbjct: 93 SFPRSRPTLYVPPGGRD--------VFRQIAGAWQTPELVEQAFCLIEYDPVGRIELGPL 144 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGL- 213 H I + + G+ + D P E+L E ++ D L+++A + Sbjct: 145 TISFHEVPHF-IRTHAVKVTGATGSFTFGADCC--PNEALVEFARDSDLLMLEATLDQPE 201 Query: 214 ---HSSHFSLSESLKKIELINPKNAILTHM 240 H H + +E+ + + +LTH+ Sbjct: 202 TNGHRGHLTAAEAGEHGREAAARRLVLTHI 231 >gi|301064960|ref|ZP_07205314.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300440943|gb|EFK05354.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 326 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 36/210 (17%) Query: 56 VIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +IVD G R I+ +++TH H DHI G + + K I + Sbjct: 86 IIVDAGSGIR----RLGNRLIEEERYHYHLIFTHSHLDHILGFPFFKPIYHP-KAVIHLM 140 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIPILQQH 168 P ++ + A +P + + + DV I+ +P+ H Sbjct: 141 GCPTTQGNIRKLLGKAMSAP---LFPIQFDALQASIDYDVECRFDFEIDSIKIVPVNLNH 197 Query: 169 GRISSLGFRF----GNVAYCTDVNAFP---------AESLEKLQNLDFLIIDA------L 209 +G++F + + TD N E + ++ D LI D+ Sbjct: 198 PNGG-MGYKFIEKGKSFVFLTD-NELGGKHRNGRTFEEYVAFSKDADLLIHDSEYTEEEY 255 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTH 239 + H + E+L+ + K L H Sbjct: 256 RITRGWGHSTYPEALRLARKAHVKRFGLFH 285 >gi|332158502|ref|YP_004423781.1| hypothetical protein PNA2_0861 [Pyrococcus sp. NA2] gi|331033965|gb|AEC51777.1| hypothetical protein PNA2_0861 [Pyrococcus sp. NA2] Length = 270 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 71/214 (33%), Gaps = 28/214 (13%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP +++LR ++ ID + +H H DH + Y Sbjct: 32 KNIFVDPGPGALIRMLRYKLDPRKIDVLFISHRHTDHCN---DAEVIVEGM-----TYG- 82 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQH 168 + D+ P + + E + + G + I QH Sbjct: 83 -VTKRRGILIGSKSVVHGDENHTPALSKYHLEALEEVHAPNPGDRFKLGEEDMIITPSQH 141 Query: 169 GRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSE 222 +++GFR FG+++Y +D F + E LI + H S + Sbjct: 142 SDPTTIGFRLKTAFGDISYISDTEYF-EKLKEWHDGARVLIASVTRPRDMKIPYHLSTDD 200 Query: 223 SLKKIE--LINPKNAILTH----MHVDLDYDMVL 250 + ++ P+ ++TH MH Y Sbjct: 201 VVYMLKDMKQKPEVLVMTHLGMKMHFAGPYKEAQ 234 >gi|221632944|ref|YP_002522167.1| hypothetical protein trd_0950 [Thermomicrobium roseum DSM 5159] gi|221156952|gb|ACM06079.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159] Length = 263 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 65/214 (30%), Gaps = 37/214 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG S P S + T+++VD GP Sbjct: 1 MKVTVLG--GSAAAPNPGQGC--------------SGYLLEC-----GRTSLLVDCGPGI 39 Query: 65 YMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAPDCMKHLF 119 +LR + + ++DA++ +H H DH+ I +R +R I ++ P L Sbjct: 40 LPSLLRYRRLDNLDAIVLSHLHQDHVLDIVPMRYALKYAPALHRRRIPLWVPPGGSLFL- 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 + + I D ++ G I P I R Sbjct: 99 QRLAQVLALGSEAADSFFAETFEIAEFDPQSVLEVPGWEIRFHPTRHW---IPCWALRVT 155 Query: 179 ---GNVAYCTDVNAFPAESLE-KLQNLDFLIIDA 208 V Y D ++L D LI +A Sbjct: 156 CPHATVVYTADTGW--DDTLPSFAHGADLLIAEA 187 >gi|116333781|ref|YP_795308.1| beta-lactamase superfamily hydrolase [Lactobacillus brevis ATCC 367] gi|116099128|gb|ABJ64277.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus brevis ATCC 367] Length = 246 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 33/216 (15%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLR-----GYFLKQKRP 105 + +++D G + + + L ++AVL TH H DH + L+ G + + Sbjct: 27 GDFHLLLDCGSGALLALEKVLDPLQLNAVLLTHYHHDHTADVGVLQYEWQLGSTQRSQAE 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y D + + P G L Sbjct: 87 LPIYG----------------HTADPLNFGALTWPHATIGRPYDPTQPIQIGPFTIT-FL 129 Query: 166 QQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--- 216 H + + R +A+ D AF + D L+ D H Sbjct: 130 ATHHPVPAYAPRITETATGATLAFTADTAAFSGLT-TWATGADVLLADTNFFADHQGTAW 188 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + +++ K + +LTH+ D + Sbjct: 189 HLTSTQAGKLAQQAGVSRLLLTHLPQVGDLQQLKAE 224 >gi|108763293|ref|YP_632131.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108467173|gb|ABF92358.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 292 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 61/225 (27%), Gaps = 44/225 (19%) Query: 53 NTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---I 106 +I+D G ++RE + ++H H DH+ G +F P + Sbjct: 47 GHRLILDAGTGIRALGEIMMREGAPQEATLFFSHLHWDHVQGF----PFFTPAWLPTSEL 102 Query: 107 DVYAA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y L P ++ G Sbjct: 103 TLYGPGANGAQALQSELAAQM-----QPPHFPVPLSTMRSRMDFRSALHARPVEVGPFRV 157 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVN----AFPAESLEKLQNLDFLIIDALKNGL 213 PI H + L +R + Y TDV E + D L +DA + Sbjct: 158 TPIDVPHPQ-GCLAYRLEADGHSFVYATDVEVRVQELAPEVGRLFEGADVLCLDA-QYTP 215 Query: 214 HS------------SHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H ++ ++ L+ + L H D + Sbjct: 216 DEYEGRKGVAKKGWGHSTMMDAAGVAGLVGARRLCL--FHHDPAH 258 >gi|284998623|ref|YP_003420391.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] gi|284446519|gb|ADB88021.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] Length = 228 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 105/275 (38%), Gaps = 58/275 (21%) Query: 5 YHFTILGCG--ASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T +G G +SLG+ +R +SS+ I N V++D GP Sbjct: 1 MKITFIGTGAGSSLGL-----------------KRVKSSILI--------NDKVLLDLGP 35 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLF 119 +++ A+ TH H DH +G+ ++ R I +Y+ ++ L Sbjct: 36 GAELRLEDMS-THPKALFITHLHVDHFNGVFD--YLVQRKIRQIPDLEIYSTKGFLEVL- 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +Y + N I + + + + +E I H I ++ + Sbjct: 92 ------------NSYIRVGNNISAKVYESDLP-RGKIDDMEIYSIQACHS-IYAVSYIIS 137 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIID--ALKNGLHSSHFSLSESLKKIELINPK 233 + V Y D LE ++++D +I + + + H S+ + + K Sbjct: 138 DGNTKVLYTGDTKEPCNIILENVKDVDLIIHETTCMNDCSAWGHTSIKQIFELFSN---K 194 Query: 234 NAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSS 268 I TH+ V+++ + ++ ++++ A DG+ + Sbjct: 195 RIIATHIPVEIE-EKIISFANNKIIIASDGLSLNV 228 >gi|332042808|gb|EGI79007.1| ribonuclease Z [Lacinutrix algicola 5H-3-7-4] Length = 301 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 93/308 (30%), Gaps = 81/308 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P+ ++ + N ++D G +Q+ + ++ I + +H H Sbjct: 8 CYSATPRTFTNPTAQVLEI-----KNHIFLIDCGEGTQVQLRKHKIKFNRIKHIFISHLH 62 Query: 86 ADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F ++ + +Y + + + L + + Sbjct: 63 GDHFFGLVGLISTFRLLTREADLHIYGPKGIKEVITLQMK-----LSKSWTNYKLIFHEL 117 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------NVAY-- 183 + + + + + IP+ R+ + GF F VAY Sbjct: 118 TSLESQVLFEDDKVQVSTIPLDH---RVYTNGFLFKEKPGERKLDMNAVLNEDIEVAYYR 174 Query: 184 ---------------------------------CTDVNAFPAESLEKLQNLDFLIIDALK 210 C+D A+ + ++N+D + ++ Sbjct: 175 KLKQGFNVENKKGDLVKNETVTFPPEKPKSYAFCSDT-AYNEAIVPLIKNIDVIYHESTF 233 Query: 211 NGLHS------SHFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPA 260 H+ H + E+ K +L N IL H D + K V A Sbjct: 234 LEQHAHLAPKTKHSTAKEAAKIAQLANAGKLILGHYSTRYDNLNMFKTEAKEYFDNVELA 293 Query: 261 FDGMQFSS 268 DG F+ Sbjct: 294 DDGKVFNL 301 >gi|312621951|ref|YP_004023564.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor kronotskyensis 2002] gi|312202418|gb|ADQ45745.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor kronotskyensis 2002] Length = 247 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 65/202 (32%), Gaps = 38/202 (18%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT----Y 134 VL TH H DHI + L Y Q L + F + + Y Sbjct: 60 VLITHTHPDHIASLGQLILYCYYQ---------------LSKKITLIFPQPEIISNLLDY 104 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRF----GNVAYCTDVNA 189 I N I P + + I + Q H + G+ Y D + Sbjct: 105 MGIRN--EIYTLKTPQDFVNYLSKLTVISLEQVHVNELPCFGYLIYLNNVTFYYSGDSKS 162 Query: 190 FPAESL-EKLQN-LDFLIID-ALKNGLHSSHFSLSESLKKIELINP---KNAILTHMHVD 243 P L + L+ +DFL D N H H S+ E E I P K H+ Sbjct: 163 IPLYILTKFLEGEIDFLFQDTCSANHNHHPHLSIKE---LSEQIPPSKRKQVYCIHIDER 219 Query: 244 LDYDMVLK---STPSRVVPAFD 262 D ++ + P +VP D Sbjct: 220 FDINLAKNLGFNIPQEIVPERD 241 >gi|258616316|ref|ZP_05714086.1| AtsA/ElaC family beta-lactamase [Enterococcus faecium DO] Length = 117 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 22/119 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + ER N + D G Sbjct: 1 MELQFLGTGA--GVPA--------------KHRNVTSIALKLLDER--NEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 MQ+LR + I + TH H DHI G+ GL Q P+++Y +++ Sbjct: 43 QMQILRTTIRPRKIGKIFITHLHGDHIFGLPGLISSRSFQGGDTPLEIYGPKGIEEYIK 101 >gi|330975303|gb|EGH75369.1| Beta-lactamase-like protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 252 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRDTERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEIAGLLAGGE-----SLQIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|16761239|ref|NP_456856.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765640|ref|NP_461255.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141065|ref|NP_804407.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56412789|ref|YP_149864.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161612962|ref|YP_001586927.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|162139569|ref|YP_217300.2| ribonuclease Z [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167992648|ref|ZP_02573745.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242432|ref|ZP_02667364.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448552|ref|YP_002046367.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197249331|ref|YP_002147269.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264292|ref|ZP_03164366.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361723|ref|YP_002141359.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244294|ref|YP_002216381.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387983|ref|ZP_03214595.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213613387|ref|ZP_03371213.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213645883|ref|ZP_03375936.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289829685|ref|ZP_06547226.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|41017524|sp|P60194|RNZ_SALTI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41017525|sp|P60195|RNZ_SALTY RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|76363379|sp|Q57M43|RNZ_SALCH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|76363380|sp|Q5PN69|RNZ_SALPA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189043790|sp|A9N598|RNZ_SALPB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808657|sp|B5EZJ2|RNZ_SALA4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808658|sp|B5FPF2|RNZ_SALDC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808661|sp|B4TBI0|RNZ_SALHS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808663|sp|B5BCN2|RNZ_SALPK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|25323589|pir||AH0795 probable hydrolase STY2544 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420853|gb|AAL21214.1| putative metal-dependent hydrolase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503538|emb|CAD07546.1| putative hydrolase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136691|gb|AAO68256.1| putative hydrolase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127046|gb|AAV76552.1| putative hydrolase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161362326|gb|ABX66094.1| hypothetical protein SPAB_00668 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194406856|gb|ACF67075.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197093199|emb|CAR58643.1| putative hydrolase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213034|gb|ACH50431.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242547|gb|EDY25167.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938810|gb|ACH76143.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605081|gb|EDZ03626.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205329254|gb|EDZ16018.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338288|gb|EDZ25052.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247520|emb|CBG25347.1| RNase Z [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301158871|emb|CBW18384.1| Ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913303|dbj|BAJ37277.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222986|gb|EFX48057.1| Ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130643|gb|ADX18073.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 305 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 80/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA ++ H S ++ I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|323486391|ref|ZP_08091716.1| hypothetical protein HMPREF9474_03467 [Clostridium symbiosum WAL-14163] gi|323694983|ref|ZP_08109131.1| ribonuclease Z [Clostridium symbiosum WAL-14673] gi|323400373|gb|EGA92746.1| hypothetical protein HMPREF9474_03467 [Clostridium symbiosum WAL-14163] gi|323500954|gb|EGB16868.1| ribonuclease Z [Clostridium symbiosum WAL-14673] Length = 303 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 82/283 (28%), Gaps = 60/283 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYF 99 ++ + R + +++D G L+E+ +D + +TH HADHI G+ GL Sbjct: 19 WLTSLMTRCDGSNLLIDCGEGT-QVALKEKGWSPKPVDVICFTHYHADHISGLPGLL-LT 76 Query: 100 LKQKRP------IDVYAAPDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDV 148 + I + L F F L + + P VI+ V Sbjct: 77 MGNAERTEPVIMIGPKGLERVVGALRTIAPELPFPLRFIELSEPREQFQIGPYVIDAYKV 136 Query: 149 PICMKSAGGVIEA-------------IPILQQH------GRISSLGFR------------ 177 + G I I Q++ G G R Sbjct: 137 NHNVTCYGYSISIPRKGRFDVERARQQQIPQKYWNRLQKGETVQDGERTLTPDMVLGPAR 196 Query: 178 -FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-------NGLHSSHFSLSESLKKIEL 229 V YCTD P E + D I + + H ++ E+ Sbjct: 197 KGIRVTYCTDTRPVP-VIAEYAKEADLFICEGMYGEDGKESKAREYKHMTMYEAASLART 255 Query: 230 INPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSS 268 P LTH L +Y ++ A DG Sbjct: 256 AKPAQMWLTHYSPSLNRPEEYMDKVREIFPEAKAAKDGWTAEL 298 >gi|254166631|ref|ZP_04873485.1| hypothetical protein ABOONEI_1723 [Aciduliprofundum boonei T469] gi|254167329|ref|ZP_04874181.1| hypothetical protein ABOONEI_2142 [Aciduliprofundum boonei T469] gi|254168988|ref|ZP_04875827.1| hypothetical protein ABOONEI_916 [Aciduliprofundum boonei T469] gi|289596485|ref|YP_003483181.1| hypothetical protein Aboo_0810 [Aciduliprofundum boonei T469] gi|197622094|gb|EDY34670.1| hypothetical protein ABOONEI_916 [Aciduliprofundum boonei T469] gi|197623592|gb|EDY36155.1| hypothetical protein ABOONEI_2142 [Aciduliprofundum boonei T469] gi|197624241|gb|EDY36802.1| hypothetical protein ABOONEI_1723 [Aciduliprofundum boonei T469] gi|289534272|gb|ADD08619.1| conserved hypothetical protein [Aciduliprofundum boonei T469] Length = 260 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 88/231 (38%), Gaps = 27/231 (11%) Query: 55 TVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDVYA 110 + +D GP +Q+ R +V D + +H H DH + L K+ + Sbjct: 33 NIHIDPGPGALVQMHRFKVNPTKTDVIAISHAHTDHYTDAEVLVEAITNGGTKKKGLLVG 92 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + ++ E F + + + +V+ + + + + K I+ H Sbjct: 93 SKSVLEGYDE-----FDPVISKYHRGLVDKVAVLSPGNVVRYKG----IKIRATKSYHND 143 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN--GLHSSHFSLSESL 224 +++GFR G ++Y D + + +N LI+ + H S E+ Sbjct: 144 PTTIGFRIETSQGVISYLADT-DYNDSLIGAHRNARVLILPVTRPLGAKIPYHLSTKEAA 202 Query: 225 KKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 K ++ I P+ AILTH + + D + K T R + A DGM Sbjct: 203 KIVKGIEPEIAILTHFGLKMIEENPEFQADWIWKETGIRTIAADDGMVVEI 253 >gi|77457600|ref|YP_347105.1| Beta-lactamase-like [Pseudomonas fluorescens Pf0-1] gi|77381603|gb|ABA73116.1| putative hydrolase [Pseudomonas fluorescens Pf0-1] Length = 253 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 55/220 (25%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++LR V + A+L TH HADH+HG+ L ++ + Sbjct: 20 ADTYVLVDCGFSLRETEKRLLRLGVNPAQLSAILVTHEHADHVHGVGLLS-----RRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + + V + G + I Sbjct: 75 PVYLSRGTLRGMRK--------------------PIEPAGFVTGGEQLQIGALNIGVIAV 114 Query: 167 QHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS 215 H + F + TD+ ++ L+ ++LD L+I D L G + Sbjct: 115 AHDAQEPTQYVFSDQEQRRFGLLTDLGSYCERVLDGYRDLDALMIESNHCRDMLARGHYP 174 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 YFLKQRVGGELGHLNNHQAAFLVAELGWQGLQHLVLAHLS 214 >gi|324991628|gb|EGC23561.1| ribonuclease Z [Streptococcus sanguinis SK353] gi|325694700|gb|EGD36606.1| ribonuclease Z [Streptococcus sanguinis SK150] Length = 309 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 90/296 (30%), Gaps = 79/296 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQN---- 200 +++AG + ++G+ L G + Y + P +++ L + Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPR--PGKTIAILGDTRKT 220 Query: 201 ---------LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A K + H + ++ + + K +L H+ Sbjct: 221 SASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|289208145|ref|YP_003460211.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. K90mix] gi|288943776|gb|ADC71475.1| cyclic-AMP phosphodiesterase [Thioalkalivibrio sp. K90mix] Length = 267 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 51/230 (22%), Positives = 84/230 (36%), Gaps = 45/230 (19%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 NRRT +S+ I +++D G L E + I V TH H DHI + Sbjct: 17 NRRT-TSILIDED--------ILIDAGSGVGDLTLGE-LQKIRHVFLTHSHLDHIGFLPM 66 Query: 95 LRGYFL-KQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPIC 151 L PI ++A P +K L E + F D T P +++ + Sbjct: 67 LADMVYSSNAPPIQIHALPPTLKALRE---HVFNWVIWPDFTCLPSPEQPLLQFRPIRPD 123 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQN---LDF 203 + + G+ E + H + ++G+ A+ D ++ E L LD Sbjct: 124 QQVSIGLREVHTLPALH-TVPAIGYGVMHNDGVGFAFTGDTSS-SEALWEALNALPYLDL 181 Query: 204 LIID-------------ALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 L+I+ A H L++ L + P+ AI TH+ Sbjct: 182 LMIESGLPDEMDGMADLAKHYTPHR----LADDLDALRH-QPRIAI-THL 225 >gi|207857731|ref|YP_002244382.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|254808659|sp|B5R2Z4|RNZ_SALEP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|206709534|emb|CAR33879.1| Ribonuclease Z [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 305 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 80/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEVSAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA ++ H S ++ I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|322381708|ref|ZP_08055667.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154332|gb|EFX46649.1| hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 252 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 65/233 (27%) Query: 46 RVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 + + T +++D G ++L + I A+ TH HADH G+ L Sbjct: 14 CIHIQSGETGILIDAGLPKTKIEKRLLENDIDPTQIKAIFITHAHADHTKGLP------L 67 Query: 101 KQKRPIDVYAAP-------DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 K I VYA+ L F Y + Sbjct: 68 ANKYKIPVYASEGEWKDIDSVDDDLCR-----FIMRHSGDYTAV---------------- 106 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G ++ P H LG+ + D L+ L +I+A Sbjct: 107 -ELGEVKLYPFSTHHDAYEPLGYAIEDRSGKRCCVVLDTGKVDENMLKMLTGSSVFVIEA 165 Query: 209 ------LKNGLHSS-----------HFSLSESLKKIELI---NPKNAILTHMH 241 ++ + + H S +++ ++ + ++ LTH+ Sbjct: 166 NHDPDMVEMSSYPNSVKGRIISDIGHLSNAQTAAALKQLVTGRGEHIYLTHLS 218 >gi|291543358|emb|CBL16467.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus sp. 18P13] Length = 260 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 61/180 (33%), Gaps = 38/180 (21%) Query: 52 SNTTVIVDTGPDFY--MQVL-REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V++D G MQ L + I + TH H+DHI G+ R + K + Sbjct: 21 PHGGVLIDAGVSCKRLMQALGDCGIPESAIRGIFITHDHSDHIKGL---RMVTKRLK--V 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA ++ L P V+E G E Sbjct: 76 PVYAQAQTLEKLIA----------GEHLAPGCPAQVMEG-------AVTAGDAELTAFDI 118 Query: 167 QHGRISSLGFRF----GNV-AYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H + S G+R G A CTD+ + L D ++++A L NG + Sbjct: 119 PHDTVQSCGYRIRTGDGRTCAVCTDLGHVTPTVHQALLGCDLVLLEANYDPRMLANGPYP 178 >gi|289706340|ref|ZP_06502698.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289556835|gb|EFD50168.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 271 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIH---GIDGLRGYFL--KQKRPIDV 108 +++D G + R + +D +L +H H DH G+ + + + V Sbjct: 40 RILLDLGNGALGVLQRYVDLEDLDGILLSHLHPDHFMDLCGMHVAIRWNPAGWGRGRLPV 99 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-----GVIEAIP 163 Y + E++ ++P + D SAG G P Sbjct: 100 YGPAGTADRIAEAYG--------------MDPEPGMHQDFEFRCWSAGRTERLGPFRFTP 145 Query: 164 ILQQHGRISSLGFRFG-------------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 + +H + R + Y D +A +E ++ D + +A Sbjct: 146 VPVRHPIDEAYAIRVEVDRVDDDGGLTTRVLTYSGDTDAC-EGLVEAARDADMFLCEAAF 204 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +G+ H + + + + +LTH+ Sbjct: 205 HEGRDDGIDGVHLTGRRAGETAAQAGARKLLLTHL 239 >gi|228988689|ref|ZP_04148775.1| hypothetical protein bthur0001_53440 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229159022|ref|ZP_04287078.1| hypothetical protein bcere0010_51930 [Bacillus cereus ATCC 4342] gi|228624441|gb|EEK81212.1| hypothetical protein bcere0010_51930 [Bacillus cereus ATCC 4342] gi|228771140|gb|EEM19620.1| hypothetical protein bthur0001_53440 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 249 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 7 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 59 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 60 DLPVYANEKTWSAMEHLIGNI----------PTEQKFIFSVGDVK-----TFGDIEVESF 104 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 105 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 164 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 165 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 221 >gi|254468140|ref|ZP_05081546.1| metallo-beta-lactamase family protein [beta proteobacterium KB13] gi|207086950|gb|EDZ64233.1| metallo-beta-lactamase family protein [beta proteobacterium KB13] Length = 250 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 55/231 (23%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V+VD G + + L ID +L TH H DH+ I + +K I Sbjct: 21 DKSIVMVDCGFNYKETENRLSELDLTFSDIDHILITHEHEDHMRAIK-----MIIKKENI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + + K + I+ E N V ++ + Sbjct: 76 RISCSYGTAKKI---------------------GIIDEVNIVNPGDMLEENDLQIEVVPV 114 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 H + F + TD + + +E NL++L+I+A L + S Sbjct: 115 PHDAREPCHYIFKKDALKIGIITDFGSLTPKIIESYSNLNYLVIEANHDASLLMKSSYPS 174 Query: 217 -----------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H + + + I I K I H+ ++ ++++T Sbjct: 175 SLKNRIYGKLGHANNDLTFELISKINKEKLKKIIFCHLSKLNNHKDIIRNT 225 >gi|171777571|ref|ZP_02919259.1| hypothetical protein STRINF_00094 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283180|gb|EDT48604.1| hypothetical protein STRINF_00094 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 258 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 34/211 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTSEDGFQLLMDCGSRAVTELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y D++ + + V + + G Sbjct: 81 KHLWEPKILPIYG----------------HTEDEQEFAKLTLDGVSQGKSYDVNGVEKIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + D + D Sbjct: 125 PFDITFIKTVH-PVPCYAFRIVERATGQTLVFTGDTGYFEGLD-KFAAGADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTH 239 H +H + E+ + + + +LTH Sbjct: 183 AGNENHPAHLTTKEAGQIAKAAGVTSLVLTH 213 >gi|50543722|ref|XP_500027.1| YALI0A13057p [Yarrowia lipolytica] gi|49645892|emb|CAG83956.1| YALI0A13057p [Yarrowia lipolytica] Length = 815 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 94/298 (31%), Gaps = 57/298 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+ AC R + L + GS T V++D G Y Sbjct: 509 ELLTLGTGS------------ACPSK----YRNVAGLIMRVPRADGSFTGVVMDCGEGTY 552 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDC 114 + R + + I + +H HADH G + P + V Sbjct: 553 GTLTRMYSPEACLQIMREIKMIYISHLHADHHLGTPTFI-EQWLKANPDETLSVVGPQSY 611 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR---I 171 + L E + + Y +E + + G+ H Sbjct: 612 KRFLEECANFTPEMQARIRYYGC--WAFLEKHRKMSALPEVPGLTSIKTCWAHHCEQSFC 669 Query: 172 SSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSL 220 GF+ NVAY D A S E ++ D +I +A + + H + Sbjct: 670 VEFGFQLDDSETFNVAYSGDTRPIEAFS-EMARDCDLVIHEATLNNDLPEEAILKKHCTF 728 Query: 221 SESLKKIELINPKNAILTHMHV------DLDYDMVL----KSTPSRVVPAFDGMQFSS 268 SE+L + + K+ +LTH +L + + P V AFD M+ Sbjct: 729 SEALGVCKDMEAKHVVLTHFSQRYPKLPELSALTLETKDLQKVP--VAIAFDMMRIRL 784 >gi|18310345|ref|NP_562279.1| ribonuclease Z [Clostridium perfringens str. 13] gi|168214882|ref|ZP_02640507.1| ribonuclease Z [Clostridium perfringens CPE str. F4969] gi|41017569|sp|Q8XKN1|RNZ_CLOPE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|18145025|dbj|BAB81069.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170713673|gb|EDT25855.1| ribonuclease Z [Clostridium perfringens CPE str. F4969] Length = 316 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 91/307 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V + +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFNGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R D+Y + ++ Sbjct: 41 QVSMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPNGIKEVIEG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + H LG+ Sbjct: 101 FLITLPYLPYKLNILEDASNLEFMVKKEKIELVELNEKISSDLTIETLGLDHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKELWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P E + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTEDIPGFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLAKKGQVKELLL 277 Query: 238 THMHVDL 244 TH + Sbjct: 278 THFSPSI 284 >gi|47568661|ref|ZP_00239358.1| metallo-beta-lactamase family protein YycJ [Bacillus cereus G9241] gi|47554649|gb|EAL13003.1| metallo-beta-lactamase family protein YycJ [Bacillus cereus G9241] Length = 264 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + + +L TH H+DHI G+ L +K Sbjct: 22 DEKKLLVDAGLSGKATEALFKQAEL--NINDVSGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 DLPVYANEKTWSAMEHLIGNI----------PTEQKFIFSIGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F N +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHNNNRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H + +L ++I K+ L H+ +D + + + + S+V Sbjct: 180 PWSIKRRILSDVGHVCNEDAALAMADVITDETKHIYLAHLSLDNNMKELARMSVSQV 236 >gi|18311587|ref|NP_563521.1| metallo-beta-lactamase family protein [Clostridium perfringens str. 13] gi|18146271|dbj|BAB82311.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 263 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 34/176 (19%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + T +++D G +Q + + ID + TH H+DHI G Sbjct: 14 SILV-----GSEKTKILIDAGLSGKKIIDGLQEVGQNPNEIDGIFITHEHSDHIKG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I +YA K + +S +P + Sbjct: 65 -AGILSRKFNIPIYANELTWKAMEKSLGKI---------------KEENIKIMPKRSTMS 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 ++ H ++S G+ + + TD+ F E L ++ + ++++ Sbjct: 109 LNDLDITSFNTPHDSVASTGYTIKHKGKSASIATDIGTFTEEILRNIRESEVILLE 164 >gi|319902163|ref|YP_004161891.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides helcogenes P 36-108] gi|319417194|gb|ADV44305.1| metallo-beta-lactamase superfamily hydrolase [Bacteroides helcogenes P 36-108] Length = 267 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 57/232 (24%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHI---HGIDGLRGYFLKQKRP 105 +++D G +++ + I AV TH HADHI G+ K Sbjct: 26 ILIDAGIAVRT--IKKGLKEAGISMEMIRAVFVTHDHADHIKAVGGLGE--------KLH 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + + +S+ K Y P+ +E+ Sbjct: 76 IPIYTTAQIHEGINKSYCMTEKLHTSAHYLEKQQPMQLED-------------FHIESFE 122 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++G+ ++ TD+ + ++ +FLI++A L G + Sbjct: 123 VPHDGTDNVGYCIEIDGKVFSFLTDLGEITPTAAGYIRKANFLILEANYDDEMLHMGTYP 182 Query: 216 -----------SHF-SLSESLKKIELINP--KNAILTHMHVDLDYDMVLKST 253 H +++ + E I + L H+ D ++ + T Sbjct: 183 QYLKDRITSRTGHMSNIATAEFLAENITEHLRYIWLCHLSKDNNHPELAYKT 234 >gi|193213095|ref|YP_001999048.1| seceted metal-dependent hydrolase of the beta-lactamase superfamily III [Chlorobaculum parvum NCIB 8327] gi|193086572|gb|ACF11848.1| seceted metal-dependent hydrolase of the beta-lactamase superfamily III [Chlorobaculum parvum NCIB 8327] Length = 248 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 19/170 (11%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 + +H H DHI G+ L + + + + ++ ++HL + + Sbjct: 53 HLFLSHLHLDHIIGLHLLNKFSIPKG--LTIHCRKGDLQHLKT----IIAPPYSLPFSAL 106 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 P+ + +D ++ G +++ P+ + ++GFR G VAYC D + Sbjct: 107 SYPVTLREHDGT-AIELDGFTVQSAPMRH---SVPTIGFRLGIEGKTVAYCPDT-GYCQS 161 Query: 194 SLEKLQNLDFLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTH 239 ++E N D LI + + H + + + K L H Sbjct: 162 AVELASNADLLIAECAFRSGEENQDWPHLNPESAARLALEAGAKQLALVH 211 >gi|167629091|ref|YP_001679590.1| beta-lactamase protein [Heliobacterium modesticaldum Ice1] gi|167591831|gb|ABZ83579.1| beta-lactamase protein [Heliobacterium modesticaldum Ice1] Length = 298 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G T ++VD G + + + +IDA++ TH H DHI G+ L ++ Sbjct: 18 EGKQTRLLVDAGLAGKAVEKGLAAVGVDPRTIDAIVVTHEHIDHIRGVG-----VLARRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA+ C + + + P +I+ N K +E Sbjct: 73 KLPVYASEGCWEGMKHAIGDV----------PEAQVRLIDPNK-----KVTLKNLEIEAF 117 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + +G + + TD+ +L + LI +A L+ G + Sbjct: 118 PTPHDARAPIGMTIDDGDSRLGIATDIGYVTRGMGRRLIDCQGLIFEANYDPKLLQTGPY 177 Query: 215 SS-----------HFSLSESLKKIELIN---PKNAILTHMHVD 243 + H S ++ + + + + +L+H+ + Sbjct: 178 PAHLKRRIASDKGHLSNPDAGEALVKLCDGAVRQVLLSHLSQE 220 >gi|239995653|ref|ZP_04716177.1| beta-lactamase-like protein [Alteromonas macleodii ATCC 27126] Length = 353 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 32/233 (13%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGI 92 + RT SS + V+ + V+VD G +Q S++ +L +H H DH + Sbjct: 88 DGRT-SSAYVVWVN---GSARVLVDAGSGSSVQFGAAGATFESLEVILLSHLHTDHSADL 143 Query: 93 DGLR--GYFLKQKRPIDVYAA------PDCMKHLFE------SFRYCFKALDDRTYPPIV 138 GYF +++ + + P ++ +F+Y + + Sbjct: 144 PSFVKGGYFTDREKDLIIMGPEGNDIMPSTNAYVSSLIGKNGAFKYLSSYTIEGQDDYTI 203 Query: 139 NPIVIENNDVPICMKSAGGV-IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 + I K + + HG I +L ++ + D N Sbjct: 204 STKSIGATTFEQPFKRNVNDSVSVEAMTVNHGPIPALAWKVKANGCEAVFSGDTNDKQGN 263 Query: 194 SLEKLQNLDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +N D L++ DA + + H + ++ + N K +L+H+ Sbjct: 264 LARFAKNADLLVLHNAIGDDAGQVAK-NLHMTPTQIIDIAAQSNAKQIVLSHI 315 >gi|167837129|ref|ZP_02464012.1| metallo-beta-lactamase family protein [Burkholderia thailandensis MSMB43] Length = 258 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + + + +V +DA+L TH H DH+ Sbjct: 14 ALVVEASNGATTTRVLLDCGFSAKELERRLARVDLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + +A Sbjct: 69 ALTLARRASLPLYTSWGTARAV------------------GADEADVDLRVLWGDETAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPRISAVLSGCDGLVLEA 166 >gi|160892681|ref|ZP_02073471.1| hypothetical protein CLOL250_00211 [Clostridium sp. L2-50] gi|156865722|gb|EDO59153.1| hypothetical protein CLOL250_00211 [Clostridium sp. L2-50] Length = 267 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 57/253 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G + + + + ++ +L TH H DH+ G+ + +K I Sbjct: 20 EETHLLVDAGVSGKKIESALNEIDRKPSDLNGILVTHEHIDHVKGLG-----VMARKHGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + +DD + IE ++ + Sbjct: 75 PIYTTGGTISEIKKMSS--VGTIDDSLF------HEIEPDEPFF-----INDLSIDASAI 121 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + + + TD+ + + KL+N D ++I+A L+ G + Sbjct: 122 WHDAADPVCYSISDGKSKFSIATDMGNYDEYVVNKLKNSDIMVIEANHDIRMLQAGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKSTPSRV 257 H S S + I+ + + K +L H+ +L Y+ V Sbjct: 182 YLKQRILGNRGHLSNERSGQLIKALLNSHIKAILLGHLSKENNFEELAYETVKLELSDN- 240 Query: 258 VPAFD----GMQF 266 A D G++ Sbjct: 241 EYASDVREFGLEV 253 >gi|297570235|ref|YP_003691579.1| hypothetical protein DaAHT2_2295 [Desulfurivibrio alkaliphilus AHT2] gi|296926150|gb|ADH86960.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2] Length = 306 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 84/274 (30%), Gaps = 60/274 (21%) Query: 44 ISRVSERGSNTTVIVDTGPDFYM---QVLREQVLS--IDA-VLYTHPHADHIHGIDGLRG 97 + + +I+D G Q++ IDA + TH H DHI G Sbjct: 31 LEIRFPELDDRLLIIDAGSGLRSLGNQMMARDFARGPIDASIFLTHTHWDHIMGFPFFVP 90 Query: 98 YFLKQKRPIDVYAA----PDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 ++ + +Y D ++ + Y + + + +N + ++ + + Sbjct: 91 IYVP-GNKLTIYGPVSYEEDTLQGIVGGQLTYRYFPVREAELAATINYVELKEGRLDL-- 147 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF---GNV---AY---------CTD--VNAFPAESL 195 G + + H + LG+R G V AY TD + AE Sbjct: 148 ---GDGVSLVTRYLNH-PVLCLGYRIEYGGKVLCTAYDTEPYRNLFVTDPAAPGYDAEMA 203 Query: 196 ---------------EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPK 233 E D LI D+ L L H S ++ K Sbjct: 204 REGEEVAAEQNRLHEEFFAGADLLIHDSQYTEQEYLAGKLGWGHSSFERAIAVARRAGVK 263 Query: 234 NAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQF 266 + L H D + D L + DG++ Sbjct: 264 SLAL--FHHDPERTDAQLDDLAANYCDREDGLEI 295 >gi|154251904|ref|YP_001412728.1| ribonuclease Z [Parvibaculum lavamentivorans DS-1] gi|154155854|gb|ABS63071.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 381 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 88/291 (30%), Gaps = 76/291 (26%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV- 108 V++DTGP + +++ ++ I +L+TH H+DHI + R + + Sbjct: 82 GGHIVVIDTGPGSWSRIVAGKLPAGKIGTILFTHLHSDHIGALGEFAVQSWIGGRVVPLE 141 Query: 109 --------------------YAAPDCMKHLFESFRYCFKALDDRT------------YPP 136 Y + + + F F + Sbjct: 142 VYGPGKLEGSVPPLNSLGHAYGSSGTVDVVR-GFAEAFDSDSGYRILHHGTDYLSPEGAR 200 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFRF---GNVAYCT-DVNAFP 191 I+ + + ++ L H + + G+R G VA + D Sbjct: 201 IIGHEIARPAPNTLVPVFDKDGLQISAFLVDHHPVEPAFGYRVEYQGRVAIISGDTKR-- 258 Query: 192 AESLEKL-QNLDFLIIDALKNG--------------------LHSS---HFSLSESLKKI 227 ES+E + D L+ +AL + +H + H S ++ + Sbjct: 259 TESVELFSKGADLLVHEALNHSMSSIISEALTETDNLRLAKMVHDTLDYHASPVDAAEIA 318 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSRV---------VPAFDGMQFSSP 269 +LTH+ L + V V +DG+ + P Sbjct: 319 RDAGVPMLVLTHIVPPLPNALARHIFMRGVAEARGDGETVLGYDGLLVTLP 369 >gi|119899618|ref|YP_934831.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Azoarcus sp. BH72] gi|119672031|emb|CAL95945.1| putative 3',5'-cyclic-nucleotide phosphodiesterase [Azoarcus sp. BH72] Length = 232 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 30/182 (16%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAA 111 + +++D G + Q+ ID + TH H DHI I L + P+ VY + Sbjct: 2 DDDILIDCGTGVGD-LEYGQLKRIDHIFITHAHLDHIAMIPLLIDSVGEARGVPVTVYGS 60 Query: 112 PDCMKHLF-ESFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + ++ L F + F A+ DR + P + VI+ + ++ A G + +P Sbjct: 61 AETIRILRSHIFNWLIWPDFSAIPDR-HRPFLRFQVIKVGE---TVRLARGAVTVMP--- 113 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 H + ++ + G + Y D P LI A+ H H + Sbjct: 114 AHHTVPAVAYCLDSGDGQLVYSGDTAYCPE-----------LIA-AINRTPHLRHLIVET 161 Query: 223 SL 224 + Sbjct: 162 AF 163 >gi|170287870|ref|YP_001738108.1| ribonuclease Z [Thermotoga sp. RQ2] gi|170175373|gb|ACB08425.1| ribonuclease Z [Thermotoga sp. RQ2] Length = 280 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 59/236 (25%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G L +V + V TH H DHI G+ ++ +++P+DV Sbjct: 21 RILFDAGEGV-STTLGSKVYAFKYVFLTHGHVDHIAGL--WGVVNIRNNGMGDREKPLDV 77 Query: 109 Y---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + ++ F + N ++ + + G P Sbjct: 78 FYPEGNRAVEEYTE------FIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFR 131 Query: 166 QQH-GRISSLGFRFGNVA------------------------------YCTDVNAFPAES 194 +H S G+ V Y V +S Sbjct: 132 TKHVSSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDS 191 Query: 195 L----EKLQNLDFLI-----IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L E+++ + LI +DA ++ + +H ++ E ++ ++ K IL H+ Sbjct: 192 LALDPEEIRGTELLIHECTFLDA-RDRRYKNHAAIDEVMESVKAAGVKKVILYHIS 246 >gi|329117846|ref|ZP_08246563.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] gi|326908251|gb|EGE55165.1| metallo-beta-lactamase domain protein [Streptococcus parauberis NCFD 2020] Length = 283 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 75/236 (31%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPD--FYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHI G+ L +K + Sbjct: 39 PKQKILVDAGLTGKKMTSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VLARKYHL 93 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + K + + I + G I+ Sbjct: 94 DIYANQNTWKIIDDRNM-------------IGKIDSEHKHIFDRDKVMTFGDIDIESFGV 140 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +RF + TD ++N D +LI I+ L++G + Sbjct: 141 SHDAHDPQFYRFMKDNKSFVMLTDTGYVSDRMSGIIENADGYLIESNHDIEILRSGGYPW 200 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + + Sbjct: 201 SLKQRILSDRGHLSNEDGAQAMIRSMGNATKKIYLGHLSKENNIKELAHMTMENQL 256 >gi|209523306|ref|ZP_03271862.1| beta-lactamase-like protein [Arthrospira maxima CS-328] gi|209496457|gb|EDZ96756.1| beta-lactamase-like protein [Arthrospira maxima CS-328] Length = 257 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 82/246 (33%), Gaps = 50/246 (20%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI- 106 R + +I D G + Q L ++ + +TH H DHI G +F PI Sbjct: 2 RVGSQRLIFDGGTGLRVLGQALLAEMPVTAHMFFTHSHWDHIQGF----PFFAPAFVPIN 57 Query: 107 --DVYA----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 ++Y ++ + D +P P+ + + + G I Sbjct: 58 TFNIYGAIAPNGSTIEQ---------RLNDQMLHPNFPVPLQVMGAKLNFIDLTIGESIY 108 Query: 161 ------AIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLII 206 L H ++G+R AY TD FP L+ +N + LI Sbjct: 109 LEDDLVIETALLNHPG-EAVGYRVSWKGYTTAYVTDTEHFPDRLDENVLKLARNANVLIY 167 Query: 207 DAL-----KNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPS 255 DA SS H + E++K + + ++ H D + D + Sbjct: 168 DATYTDEEYYSPKSSKVGWGHSTWQEAVKVAQAAGVQKLVI--FHHDPLHNDDFMDKIGE 225 Query: 256 RVVPAF 261 V AF Sbjct: 226 NVADAF 231 >gi|134095357|ref|YP_001100432.1| putative metallo-beta-lactamase family protein [Herminiimonas arsenicoxydans] gi|133739260|emb|CAL62309.1| Putative metallo-hydrolase/oxidoreductase superfamily protein [Herminiimonas arsenicoxydans] Length = 261 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 58/232 (25%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------QVLREQVLSIDAVLYTHPHADHIHGID 93 + + TTV++D G Q+L + ++ TH H DH+ G+ Sbjct: 16 ALLISTQSGTTRTTVMLDCGFGIRETERRLERLQLLPADLA---GIIVTHEHQDHVGGV- 71 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + ++ + V+ + + +E + Sbjct: 72 ----FKFARRHRLPVWLTFGTYQATRDRCD------------------DVEIHICRDGAV 109 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 A G +E P H + + + + TD A +E L D L+++ Sbjct: 110 FAIGDLELSPYTVPHDAREPVQYVASDGALRLGVLTDAGHATAHLIEALAACDALMLECN 169 Query: 209 -----LKNGLHSS-----------HFSLSESLKK---IELINPKNAILTHMH 241 L++ + H S + + ++ K + H+ Sbjct: 170 HDIQMLRDSAYPPSLKQRIGGDYGHLSNQMAGEILSGLDKSRLKRVVGAHLS 221 >gi|326402251|ref|YP_004282332.1| coenzyme PQQ synthesis protein B [Acidiphilium multivorum AIU301] gi|325049112|dbj|BAJ79450.1| coenzyme PQQ synthesis protein B [Acidiphilium multivorum AIU301] Length = 307 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 93/316 (29%), Gaps = 65/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ G C + RT+++L +S + VI + Sbjct: 1 MKIIILGAAAGGGFPQWNCACGNCARARCGDPAAKSRTQAALAVSV----NDSDYVIFNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L R + I A + T D G+ L++ +YA Sbjct: 57 SPDLRGQILATPALQPRSGLRDSPIAAAVLTGGDVDFTAGL-----LNLREGHRFGLYAG 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH--- 168 L + F+ LD P P+ + + G +EA + + Sbjct: 112 RRIFDLLGD--SQIFRVLDAGLVPRRELPVDVPTRLANGVGQDLGITVEAFVVPGKVALY 169 Query: 169 -----------GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIID----- 207 ++G R + Y + +++ ++ D Sbjct: 170 AEDVSRADFGSSEGDTIGLRIADDHGRAFFYIPSCARVSEDVARRVRGAALVLFDGTLWH 229 Query: 208 -------ALKNGL-----HSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVL 250 L H S S+ ++ + H++ D Sbjct: 230 DNEMIEAGLMPKTGARMGHISVSGPEGSIAAFAGLDVARKVFVHVNNSNPMILDDTPERA 289 Query: 251 KSTPSRVVPAFDGMQF 266 ++ + + A DGM+ Sbjct: 290 EAERAGWIVAHDGMEI 305 >gi|289670660|ref|ZP_06491735.1| putative metallo-beta-lactamase superfamily protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 334 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 15/167 (8%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + + + TH H+DH + + + + Sbjct: 83 DGQPYLIDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHSADLLNVVWLAWASGLQTAVH 142 Query: 108 VYAAPDCMKHLFESFRY----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +Y P K + + + PP I + D P + + Sbjct: 143 LYGPPGIAKMVNAFVEMNAIDIEARIREEGRPPFKQLIHVHEFDQPGTV-LKNDQVTVTA 201 Query: 164 ILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI 205 L H + + +RF +V + D PA + E +N D L+ Sbjct: 202 TLVDHYTLKPAFAYRFEARDRSVVFSGDTRYLPALA-EFAKNTDILV 247 >gi|259046824|ref|ZP_05737225.1| ribonuclease Z [Granulicatella adiacens ATCC 49175] gi|259036447|gb|EEW37702.1| ribonuclease Z [Granulicatella adiacens ATCC 49175] Length = 314 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 84/293 (28%), Gaps = 77/293 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP R +S+ + + E N + D G Sbjct: 1 MELQFLGTGA--GVPS--------------KMRNVTSIALKLLDE--INEVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------P 112 Q+L + I + TH H DHI G+ GL R + + + +Y Sbjct: 43 QQQILNTNIRPGKIKKIFITHMHGDHIFGLPGLLTSRSFQ-GGEDDLTLYGPKGIKNFID 101 Query: 113 DCMKHLFESFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA--IPILQQH 168 ++ Y + + +E + + S G + P Q Sbjct: 102 TTIQASCSKLGYPLRVVEFEKEGLLFEDKHFKVEMKRLEHGIPSYGFRVTEKDQPGELQA 161 Query: 169 GRISSLGFRFGNVA---------------------YCT------------DVNAFPAESL 195 R+ LG FG + Y + D S Sbjct: 162 DRLKELGIPFGPLYGKLKKGETITLEDGTIVNGQDYISPDIKGRVVTICGDTRKC-EASE 220 Query: 196 EKLQNLDFLIIDALKNG-------LHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A G H H + ++ + + K +LTH+ Sbjct: 221 ILAYRSDVLVHEATYEGDKGQQAYRHF-HSTSLQAAEVAKNAEVKRLLLTHIS 272 >gi|170699300|ref|ZP_02890349.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] gi|170135792|gb|EDT04071.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 53/254 (20%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+ + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGIDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRGSLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + +P H L F F + TDV L D L++++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITTVLSGCDALVLESNHDT 170 Query: 209 -------------LKNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKS 252 + G + H S + L +E ++ + H+ + + + Sbjct: 171 AMLAGSRYPQSLKARIGGNHGHLSNDAAAGILASLERSRLQHLVAAHLSQQNNRPELARQ 230 Query: 253 TPSRVVPAFDGMQF 266 + V DG + Sbjct: 231 ALAGV-LGTDGEEV 243 >gi|116333981|ref|YP_795508.1| beta-lactamase superfamily hydrolase [Lactobacillus brevis ATCC 367] gi|122269335|sp|Q03QP5|RNZ_LACBA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116099328|gb|ABJ64477.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus brevis ATCC 367] Length = 317 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 89/292 (30%), Gaps = 75/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S + + ER N+ + D G Sbjct: 1 MEIEFLGTGAGS----------------PGKFRNVTSTALRLLDER--NSVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAP------- 112 Q+LR + ID + TH H DHI G+ GL R + P+ +Y Sbjct: 43 QHQILRTTLKPRKIDKIFITHLHGDHIFGLPGLLSSRSFQ-GGDAPLTIYGPKGIRNFVE 101 Query: 113 ------DCMKHLFESF------RYCFKALDDRTYPPIVNPIV------IENNDVPICMKS 154 + + F+ R Y ++ + IE D P ++ Sbjct: 102 VSLRVSETKLSYKIRYQELTTDGLVFEDGKFRVYAQHLDHRIECFGYRIEEKDHPGELQV 161 Query: 155 AGGVIEAIP-------------ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESL 195 IP + GR+ + G VA D P Sbjct: 162 EQLQAAKIPSGPVYGQLKAGKTVTLPDGRVINGADFLGPAQPGRIVAILGDTRQTPNAEK 221 Query: 196 EKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + N D L+ ++ K H + ++ + + ++ K +L H+ Sbjct: 222 LAI-NADVLVHESTFAKGESKLARSYYHSTNIQAAELAKRMHVKQLLLNHIS 272 >gi|289664476|ref|ZP_06486057.1| putative metallo-beta-lactamase superfamily protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 334 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 15/167 (8%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + + + TH H+DH + + + + Sbjct: 83 DGQPYLIDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHSADLLNVVWLAWASGLQTAVH 142 Query: 108 VYAAPDCMKHLFESFRY----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +Y P K + + + PP I + D P + + Sbjct: 143 LYGPPGIAKMVNAFVEMNAIDIEARIREEGRPPFKQLIHVHEFDQPGTV-LKNDQVTVTA 201 Query: 164 ILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI 205 L H + + +RF +V + D PA + E +N D L+ Sbjct: 202 TLVDHYTLKPAFAYRFEARDRSVVFSGDTRYLPALA-EFAKNTDILV 247 >gi|224583202|ref|YP_002637000.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254808662|sp|C0Q055|RNZ_SALPC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|224467729|gb|ACN45559.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 305 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 80/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGPPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA ++ H S ++ I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|71908970|ref|YP_286557.1| Beta-lactamase-like [Dechloromonas aromatica RCB] gi|71848591|gb|AAZ48087.1| Beta-lactamase-like protein [Dechloromonas aromatica RCB] Length = 255 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 38/213 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S G+ +++RT +S + +++D G Sbjct: 1 MKLRVLGC--SGGI-------------GGRHQRT-TSFLVDHD--------ILIDAGTGV 36 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAAPDCMKHLFESFR 123 + E + +ID V TH H DHI + + ++++P+ VY + L + Sbjct: 37 GELSIAE-MAAIDHVFLTHAHLDHIVSLPLMIDSVGDRRRKPLMVYGTQAVLDTLRQ--- 92 Query: 124 YCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 + F D + P + + + G + H + ++G+ Sbjct: 93 HIFNWSIWPDFSVLPRADQPFMRYQTIETGATVTLGDRGISALPVDH-TVPAVGYCLDSG 151 Query: 180 --NVAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 ++ + D A + L +L NL LII+ Sbjct: 152 AASLVFSGDTGPCDAFWQGLNRLDNLRHLIIEC 184 >gi|328946463|gb|EGG40603.1| ribonuclease Z [Streptococcus sanguinis SK1087] Length = 309 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 90/296 (30%), Gaps = 79/296 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ ++++ Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIFGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQN---- 200 +++AG + ++G+ L G + Y + P +++ L + Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGIKIIAADYISAPR--PGKTIAILGDTRKT 220 Query: 201 ---------LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A K + H + ++ + + K +L H+ Sbjct: 221 SASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|254411019|ref|ZP_05024797.1| metallo-beta-lactamase superfamily protein [Microcoleus chthonoplastes PCC 7420] gi|196182374|gb|EDX77360.1| metallo-beta-lactamase superfamily protein [Microcoleus chthonoplastes PCC 7420] Length = 282 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 32/243 (13%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLS---IDAV-LYTHPHADHIHGIDGLRGYFL 100 S V R ++ +I D G +L + + I+A +TH H DHI G+ FL Sbjct: 35 SCVEMRIADKRLIFDGGTGIR--MLGKNLKPQLPIEAYWFFTHYHWDHIQGVPFFDPAFL 92 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + ++ A + + F+ L+ P ++ D+ G I Sbjct: 93 E-GNLLHIHGAAPDGVSMQQHFKERVLHLN-SPVPKREIQADLKFYDLICGDTMTLGDIT 150 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDAL--- 209 H ++G+R + YCTD +P L ++ D LI DA+ Sbjct: 151 IETSPLNHPN-GAMGYRVTWQGRSAVYCTDTEHYPDHLDENVLNLARDADILIYDAMYTD 209 Query: 210 KNGLHSS-------HFSLSESLKKIELINPKN-AILTHMHVDLDY-DMVLKSTPSRVVPA 260 + + H + E +K + K AI H + ++ D +L V A Sbjct: 210 QEYHNPKSPKVGWGHSTWQEGVKLAKAAGVKQLAIF---HHEPNHSDDMLDEIAIEVKSA 266 Query: 261 FDG 263 +G Sbjct: 267 CEG 269 >gi|319946570|ref|ZP_08020804.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319746618|gb|EFV98877.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 269 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 58/257 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGL 95 S I ++VD G +L E + +DA+L TH H+DHIHG+ Sbjct: 19 SFYIETP-----KKKILVDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVG-- 71 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K +D+YA K + + Y V+ ++ + Sbjct: 72 ---VLARKYGMDLYANEATWKAM-----------EGSKYLGKVDDSQKHLFEMGKTLTF- 116 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI----- 205 G ++ H + +RF + TD ++N D +LI Sbjct: 117 -GDLDVESFGVSHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHD 175 Query: 206 IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDY 246 ++ L+ G ++ H S + + I + K L H+ +L + Sbjct: 176 VEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNKTKKIYLGHLSKENNIKELAH 235 Query: 247 DMVLKST-PSRVVPAFD 262 ++ + + D Sbjct: 236 MTMVNQLARADLAVGHD 252 >gi|119953531|ref|YP_945740.1| ribonuclease Z [Borrelia turicatae 91E135] gi|254808618|sp|A1R0H8|RNZ_BORT9 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|119862302|gb|AAX18070.1| metal-dependent hydrolase [Borrelia turicatae 91E135] Length = 319 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 102/337 (30%), Gaps = 103/337 (30%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++ ILG G T P + R +S+ I E + + D G Sbjct: 2 NFNINILGTGG----------------TRPLHNRYLTSVLIEYHGE-----SFLFDCGEA 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKH 117 M + ++++ I + TH HADHI G+ G+ +K P+ + K+ Sbjct: 41 TQMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMAQSGNTRKEPLTIIGPIGIKKY 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + + L I+ +I N I + IE I + I +G+ Sbjct: 101 LETNI----ELLRVHKNYDIIYKEIIINKTESILYEDKKKRIEYIKLKH---SIDCVGYL 153 Query: 178 F------GNV-----------------------------------------------AYC 184 F G AY Sbjct: 154 FIEKNKPGKFDTQKAESLNIPKGPIRKKLQEGHEVILNEKKILPSDILGEPQKGLKFAYI 213 Query: 185 TDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILT 238 TD A+ E ++N + +II++ LK H + + K + L Sbjct: 214 TDT-AYSEELSTHIKNFNLVIIESTFKNELKEEAKKKLHLTAKLAAKITKKAKVHQTGLI 272 Query: 239 HMH------VDLDY--DMVLKSTPSR-VVPAFDGMQF 266 H DL D + P+ + DGM+ Sbjct: 273 HFSERYTLNKDLFELLDEAKQEYPNGEIFLTKDGMRL 309 >gi|115352181|ref|YP_774020.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115282169|gb|ABI87686.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 53/254 (20%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+ + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGIDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRGSLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + +P H L F F + TDV L D L++++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITTVLSGCDALVLESNHDT 170 Query: 209 -------------LKNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKS 252 + G + H S + L +E ++ + H+ + + + Sbjct: 171 AMLAGSRYPQSLKARIGGNHGHLSNDAAAGILASLERSRLQHLVAAHLSQQNNRPELARQ 230 Query: 253 TPSRVVPAFDGMQF 266 + V DG + Sbjct: 231 AFAGV-LGTDGEEV 243 >gi|125975633|ref|YP_001039543.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|256003632|ref|ZP_05428621.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|125715858|gb|ABN54350.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|255992423|gb|EEU02516.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|316939750|gb|ADU73784.1| beta-lactamase superfamily hydrolase [Clostridium thermocellum DSM 1313] Length = 244 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 86/271 (31%), Gaps = 50/271 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG + P G S + + T +++D G Sbjct: 1 MKLTILG--NNGPFPSAGGAC---------------SGYLVTEGD----TRILIDCGNGV 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLR-GYFLK--QKRPID---VYAAPDCMKH 117 + ++ + AV+ TH H+DH+ + LR +K + I+ VYA + + Sbjct: 40 LANYQKFARIEDLSAVILTHLHSDHMSDMMVLRYALQIKKSRGADIELLKVYAPSEPAEE 99 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D + PI V++ ++ I ++ + +G Sbjct: 100 YNR-----LNIPDVYSLNPISEDTVLKFGNLEISFAVMKHPVKCFGVSVYNGS------- 147 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSS--HFSLSESLKKIELINP 232 + D +E + D +++DA K+ + H + E + Sbjct: 148 -KRFVFSGDTAW-DQNIIEFSRGADLVMLDAGLLSKDKKSDNVPHLTARECGLVAKEAGV 205 Query: 233 KNAILTHMHVDLD---YDMVLKSTPSRVVPA 260 +LTH + D + K V A Sbjct: 206 SKLLLTHFWPEDDVSNHLAEAKENFENVEIA 236 >gi|323126807|gb|ADX24104.1| zinc-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 269 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 25 PKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E LD + + G ++ Sbjct: 80 DVYANEKTWQFMDERN--MLGKLDAS-----------QKHIFQRDKMLTFGDVDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 SLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|41017580|sp|Q9HJ19|RNZ_THEAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 307 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 89/289 (30%), Gaps = 72/289 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P R+ + V + + + D Sbjct: 1 MASNIRIIFYGTGGSWPTP------------------LRA---MPGVGVKIDDVLNLFDC 39 Query: 61 GPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+++ + ID + TH H DH G+ GL F + + ++++ +K Sbjct: 40 GEGTQKQIMKSSTSFMDIDNIFITHFHGDHFLGLLGLVQSMSFNNRTKQLNIFGPHGAIK 99 Query: 117 HLFES---------FR-YCFKALDDRTY---------------PPIVNPIVIENNDVPIC 151 L + F ++ DRTY P ++ + E + V I Sbjct: 100 ILSNALNVGYYTLHFPLKIYELEPDRTYDLGKFLIRTMLNDHPVPALSYSIEERDLVRID 159 Query: 152 MKSA---GGVIEAIPILQQHGRISSLG--FRFGNVA----------YCTDVNAFPAESLE 196 + A I ++++G G +R ++A Y D +E Sbjct: 160 PEKAREKNIPSRIIEKIRENGSYVYKGNEYRIDDIAGGVRKGRRIVYTGDTRPM-DRMIE 218 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 +N D LI D + H S ++ + L H Sbjct: 219 FARNADVLIHDTTTDSSFEPMVNEFGHSSSRQAARIARQARVGRLYLYH 267 >gi|256375154|ref|YP_003098814.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] gi|255919457|gb|ACU34968.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] Length = 256 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 38/248 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++LGC S VP T +S + V++D G Sbjct: 1 MRLSVLGCAGS--VPGPG---------------TPTSGYLVEAG----GARVVLDLGSGV 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + +LR +DAVL +H H DH L ++ P Y P + + Sbjct: 40 FSGLLRRCDPFDLDAVLLSHLHLDHCADFSALA--TYRRHHPEPPY-DPSSRRLSVLAPG 96 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI----SSLGFRFG 179 + + L + + +++ A G P+ + R+ + FR Sbjct: 97 HAPERLAAAHAASRADLERLRLDELFDFTPLAAGRHRIGPVEVEVARMRHICEAYAFRLT 156 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSS---HFSLSESLKKIELIN 231 ++ + D E +E + D L+ D A + + H S E+ Sbjct: 157 HGGRSLVFSGDTVQC-GELVELARGADLLLADAAWREQAGRADHLHMSGKEAASVAAEAG 215 Query: 232 PKNAILTH 239 +LTH Sbjct: 216 VGRLLLTH 223 >gi|16082168|ref|NP_394611.1| ribonuclease Z [Thermoplasma acidophilum DSM 1728] gi|10640466|emb|CAC12280.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 308 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 89/289 (30%), Gaps = 72/289 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P R+ + V + + + D Sbjct: 2 MASNIRIIFYGTGGSWPTP------------------LRA---MPGVGVKIDDVLNLFDC 40 Query: 61 GPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+++ + ID + TH H DH G+ GL F + + ++++ +K Sbjct: 41 GEGTQKQIMKSSTSFMDIDNIFITHFHGDHFLGLLGLVQSMSFNNRTKQLNIFGPHGAIK 100 Query: 117 HLFES---------FR-YCFKALDDRTY---------------PPIVNPIVIENNDVPIC 151 L + F ++ DRTY P ++ + E + V I Sbjct: 101 ILSNALNVGYYTLHFPLKIYELEPDRTYDLGKFLIRTMLNDHPVPALSYSIEERDLVRID 160 Query: 152 MKSA---GGVIEAIPILQQHGRISSLG--FRFGNVA----------YCTDVNAFPAESLE 196 + A I ++++G G +R ++A Y D +E Sbjct: 161 PEKAREKNIPSRIIEKIRENGSYVYKGNEYRIDDIAGGVRKGRRIVYTGDTRPM-DRMIE 219 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 +N D LI D + H S ++ + L H Sbjct: 220 FARNADVLIHDTTTDSSFEPMVNEFGHSSSRQAARIARQARVGRLYLYH 268 >gi|309790325|ref|ZP_07684892.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308227659|gb|EFO81320.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 558 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 62/186 (33%), Gaps = 34/186 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ + A+L TH H DHI + L P VYA L Sbjct: 57 LREKTDKVKAILLTHGHEDHIGAVPHLVA---DLGFP-PVYATRLTHGILGNK------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + VN I I + D G P H ++GF G V Y Sbjct: 106 LKEHRLLDKVNTITINDKDA-----FQVGQFTIEPFHIAHSIPDAVGFAITCAGGLVVYL 160 Query: 185 TD-------VNAFPAESLEKLQ----NLDFLIIDALKNGL---HSSHFSLSESLKKIELI 230 TD V+ P + ++ + LI D ++ S S+ E+ I + Sbjct: 161 TDWKLDHTPVDGKPTDLVKLAELGQRKPLALITDCVRVESKGYTPSETSVGEAFDNIFAV 220 Query: 231 NPKNAI 236 P I Sbjct: 221 APGRVI 226 >gi|306832339|ref|ZP_07465493.1| metallo-beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425778|gb|EFM28896.1| metallo-beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 34/211 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTSEDGFQLLMDCGSRAVTELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y D++ + + V + + G Sbjct: 81 KHLWEPKILPIYG----------------HTEDEQEFAKLTLDGVSQGKAYDVNGVEKIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + D + D Sbjct: 125 PFDITFIKTVH-PVPCYAFRIVERATGQTLVFTGDTGYFEGLD-KFAAGADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTH 239 H +H + E+ + + + +LTH Sbjct: 183 AGNENHPAHLTTKEAGQIAKAAGVTSLVLTH 213 >gi|269925877|ref|YP_003322500.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789537|gb|ACZ41678.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 249 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 26/203 (12%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------KR 104 T+++D G + ++ SI A++ +H H DH L Y Sbjct: 28 EQQTILIDVGTGVFERLRATADPESITAIVISHLHFDHWA---DLIPYRYYLSLEAKPSN 84 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P +Y P+ ++ L + +D P E + G Sbjct: 85 PPKLYLPPNGVEILRR----VVEPIDPN---PDFFTGTFETFEYDPQSGLHIGKAHFQFR 137 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSH 217 H I + G R Y D E + D L+ +A + G + H Sbjct: 138 KMLH-PIDTYGMRISTNDRTFVYSADTGW-EDSIYEFTEQADLLLCEAAYVDQPGNPNVH 195 Query: 218 FSLSESLKKIELINPKNAILTHM 240 + ++ K + N K +LTH+ Sbjct: 196 ITAEQAGKIAQAGNVKKLVLTHL 218 >gi|168817958|ref|ZP_02829958.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344730|gb|EDZ31494.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 305 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 79/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 + Q +D ++ +DA ++ H S ++ I+TH+ Sbjct: 213 TAPCEAAFALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|320108414|ref|YP_004184004.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] gi|319926935|gb|ADV84010.1| metallo-beta-lactamase family protein [Terriglobus saanensis SP1PR4] Length = 356 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S T ++VD G + R E ++DA+L TH HADH+ G+ L +K Sbjct: 18 SSSGTRILVDAGLSCRELMRRMAMVGENPETLDAILITHEHADHVAGLP-----VLARKF 72 Query: 105 PIDVYAAPDCMKH 117 I VY + Sbjct: 73 GIPVYFTEATHRA 85 Score = 42.8 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 38/155 (24%) Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCT 185 D+ +Y P+V ++ A G I+ +P H GF F + + T Sbjct: 186 DNPSYLPVVEYFRAGSH-------LAIGDIDILPFTIPHDAADPCGFVFEAEGIRLGFAT 238 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIE 228 D+ P L+N D L++++ L++G + H S + + + + Sbjct: 239 DLGYVPQNVKMALKNCDALLLESNHDLEMLRDGPYPWSVKQRVLSRVGHLSNTATAEFLT 298 Query: 229 L---INPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 IL H+ + P A Sbjct: 299 RDYDGGAAYVILAHLS-------ESNNLPEMARLA 326 >gi|257483919|ref|ZP_05637960.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331013150|gb|EGH93206.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 252 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVAANQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G + + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQVGALGIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L+ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQHYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|167720307|ref|ZP_02403543.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei DM98] gi|217420366|ref|ZP_03451871.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] gi|217395778|gb|EEC35795.1| metallo-beta-lactamase family protein [Burkholderia pseudomallei 576] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 32/175 (18%) Query: 43 KISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + S + T V++D G + + + +V +DA+L TH H DH+ Sbjct: 15 LVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVG-----CA 69 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L ++ + +Y + + + + ++ + + +A G Sbjct: 70 LTLARRASLPLYTSWGTARAV------------------GADEADVDLHVLWSDETAAVG 111 Query: 158 VIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + +P H L F F + + TDV L D L+++A Sbjct: 112 DLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEA 166 >gi|15643627|ref|NP_228673.1| hypothetical protein TM0864 [Thermotoga maritima MSB8] gi|61680268|pdb|1WW1|A Chain A, Crystal Structure Of Trnase Z From Thermotoga Maritima gi|61680269|pdb|1WW1|B Chain B, Crystal Structure Of Trnase Z From Thermotoga Maritima gi|158428284|pdb|2E7Y|A Chain A, High Resolution Structure Of T. Maritima Trnase Z gi|158428285|pdb|2E7Y|B Chain B, High Resolution Structure Of T. Maritima Trnase Z gi|4981399|gb|AAD35946.1|AE001753_2 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 280 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 53/233 (22%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G L +V + V TH H DHI G+ ++ +++P+DV Sbjct: 21 RILFDAGEGV-STTLGSKVYAFKYVFLTHGHVDHIAGL--WGVVNIRNNGMGDREKPLDV 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + E + +A D + N ++ + + G P +H Sbjct: 78 FYPEG-NRAVEEYTEFIKRANPDLRFS--FNVHPLKEGERVFLRNAGGFKRYVQPFRTKH 134 Query: 169 -GRISSLGFRFGNVA------------------------------YCTDVNAFPAESL-- 195 S G+ V Y V +SL Sbjct: 135 VSSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL 194 Query: 196 --EKLQNLDFLI-----IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E+++ + LI +DA ++ + +H ++ E ++ ++ K IL H+ Sbjct: 195 DPEEIRGTELLIHECTFLDA-RDRRYKNHAAIDEVMESVKAAGVKKVILYHIS 246 >gi|156551824|ref|XP_001604122.1| PREDICTED: similar to zinc phosphodiesterase [Nasonia vitripennis] Length = 878 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 110/304 (36%), Gaps = 67/304 (22%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K+Y +LG G+S +P N+ +S + +V+E T++I+D G Sbjct: 562 KEYPRLVMLGTGSS--IP---------------NKVRNTSGILFQVNED---TSIILDCG 601 Query: 62 PDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---DVY- 109 Q++R + SI AV +H HADH G+ G+ LKQ++ + V+ Sbjct: 602 EATMGQIIRFFGVSEADRVLKSIKAVYVSHLHADHHLGLVGI----LKQRKRLTDEPVFL 657 Query: 110 -AAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 A + + F + ++ I ++ + + G+ I Sbjct: 658 LAPQQISWYLNYYHSRFEPIQDLYRLISNRDLLLNQTILSSATSKALYDSLGIANISTIN 717 Query: 166 QQHGRISSLGFRFG-----NVAYCTDVNAFP-AESLEKLQNLDFLIIDAL------KNGL 213 H + G Y D P ++ ++ LI +A + + Sbjct: 718 VTHCPF-AYGIAITLNDGRKTCYSGDT--VPCENMVKLAKDSFLLIHEATMEDGLEQEAV 774 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS---------RVVPAFDGM 264 H ++S+++ N +LTH Y + + PS RV AFD M Sbjct: 775 LKRHSTISQAVSIGVKANVNFTLLTHFSQR--YSKIPR-LPSVEQSGIDFARVGIAFDFM 831 Query: 265 QFSS 268 + S Sbjct: 832 KISF 835 >gi|257899656|ref|ZP_05679309.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|257837568|gb|EEV62642.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] Length = 269 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 56/247 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 SL I ++VD G Q+ R +D +L TH H DHIHG+ Sbjct: 21 SLYIE-----SEKKRLLVDAGLSGKKITSLMAQIDRTP-DQLDGILVTHEHRDHIHGVG- 73 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K +DV+A + + P I N V + + + Sbjct: 74 ----VLARKYHLDVFANQQTWEAME---------------PLIGNVPVEQKHLFEMGKVR 114 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI---- 205 G I+ H + +RF TD ++N D +L+ Sbjct: 115 TFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYLMESNH 174 Query: 206 -IDALKNGLHS-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVL 250 ++ L+ G + H S + +L ++I K L H+ + + + Sbjct: 175 DLEMLRMGPYPWNLKQRILGDRGHLSNEDGALVMTDVIGNRTKRIYLGHLSKENNMKELA 234 Query: 251 KSTPSRV 257 T V Sbjct: 235 HLTMENV 241 >gi|228475514|ref|ZP_04060232.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228270296|gb|EEK11731.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 263 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + + Q+ R + +++ +L TH H+DHI G+ + ++ Sbjct: 19 ESEKGSLLVDVGLTGKKMENLFSQIDR-DIKNLNGILVTHEHSDHIKGLG-----VIARR 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA K + + DD+ P+ + + AG IE+ Sbjct: 73 YGLPVYANEKTWKAIEKK--------DDK--IPMDQKFIFNPYE---TKSIAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 118 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCR 177 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + + K L+H+ D Sbjct: 178 YPWKTKQRILSDMGHVSNEDAGHAMADVITGHTKRIYLSHLSRD 221 >gi|33591564|ref|NP_879208.1| metallo-beta-lactamase family protein [Bordetella pertussis Tohama I] gi|33571206|emb|CAE40710.1| metallo-beta-lactamase family protein [Bordetella pertussis Tohama I] Length = 294 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 98/314 (31%), Gaps = 73/314 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LG G P R S + RV + ++ D G Sbjct: 1 MNLWLLGTGTPT----------------PSLWRM-CSGYLVRVGDE----YLVFDHGFGA 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR-----PIDVYAAPDCMKH 117 + ++L V + ++H H DH+ L + +DVY P +K Sbjct: 40 HHRMLELGVRATQVSHAFFSHHHYDHMGDYPRLL-LTRWDQGVGRIDDMDVYGPPP-LKL 97 Query: 118 LFES-------FR-------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + E F ++A P + E +++ G Sbjct: 98 ITERLIGDDGAFGPDLISRTENQCSIDVYQARGGTGMRARPQPHLHE-LAADAVVRTPGW 156 Query: 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 + P+ + S G+R + Y D P+ +L +L Q+ D L+ + Sbjct: 157 TVRVAPVNHFAPHLVSYGYRLDADGQSFVYSGDTG--PSRALRELAQDCDVLVHMCHYVS 214 Query: 208 ALKNGLHSSHFSLS--ESLKKIELINPKNAILTHMHVDLDY--------DMVLKSTPSRV 257 + F++ E + N +N +++H+ D+ V + + Sbjct: 215 GTAPSKTFAAFTMGHRELAELAAEANVRNLVISHVTEQFDHPGMRERIVREVGEIYRGNI 274 Query: 258 VPAFDGMQFSSPIP 271 DGM+ P Sbjct: 275 FFGEDGMEIPFAGP 288 >gi|15835240|ref|NP_296999.1| ribonuclease Z [Chlamydia muridarum Nigg] gi|270285412|ref|ZP_06194806.1| ribonuclease Z [Chlamydia muridarum Nigg] gi|270289426|ref|ZP_06195728.1| ribonuclease Z [Chlamydia muridarum Weiss] gi|301336809|ref|ZP_07225011.1| ribonuclease Z [Chlamydia muridarum MopnTet14] gi|41017583|sp|Q9PK48|RNZ_CHLMU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|7190665|gb|AAF39456.1| AtsA/ElaC family protein [Chlamydia muridarum Nigg] Length = 304 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 85/284 (29%), Gaps = 70/284 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILGC +S PT +N R + ++ D G Sbjct: 6 LTILGC-SSQQ------------PTRHRNH--------GAYLLRWNGEGLLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMKHL-FES 121 Q + + + + +H H DH G+ + L K PI Y K+ Sbjct: 45 QFIYANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKVSHPIHCYYPASGKKYFDRLR 104 Query: 122 FRYCFKALDDRTYPPI--------VNPIVIENNDVPICMKSAGGVIEAI----------- 162 + + PI IE + + + G I Sbjct: 105 YSTIYHETIKVVEHPISSEGIVEDFGNFRIEARQLDHLVDTLGWRITEPDTTKFISEKIK 164 Query: 163 ------PILQ---QHGRISSLG--FRFGNVAYC--TDVNAFPAESL------EKLQNLDF 203 PI+Q G I R +V+Y D A A+SL + +N Sbjct: 165 AAGLKGPIMQELINKGIIKVNNNIIRLEDVSYTRKGDSIAVVADSLPCQAIVDLAKNARI 224 Query: 204 LIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 L+ ++ H H + ++ ++ + + ILTH Sbjct: 225 LLCESTYLEEHAHLAKNHYHMTAKQAAEQAKRAEAQQLILTHFS 268 >gi|257092295|ref|YP_003165936.1| beta-lactamase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044819|gb|ACV34007.1| beta-lactamase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 255 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 90/256 (35%), Gaps = 53/256 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S G I G RRT +S+ + + +++D G Sbjct: 1 MKVRVLGC--SGG---IGGSH----------RRT-TSMLV--------DDDLLIDAGTGV 36 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGI----DGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 L E + ID V TH H DHI + D + + +P+ VYA + + + + Sbjct: 37 ADLSLAE-LAVIDHVFLTHSHLDHIASLPLLVDSVSDL---RDKPLTVYATAETLAIIGK 92 Query: 121 SFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F D P V+ + + G + +H + ++G++ Sbjct: 93 ---HIFNWVIWPDFRVIPSPEEAVMRYRSIALGQSVRLGGRTITALPAEH-TVPAVGYQL 148 Query: 179 ----GNVAYCTDVNAFPAESLEK---LQNLDFLIIDAL------KNGLHSSHFSLSE-SL 224 G++ + D + NL FL+I+ + S H S + Sbjct: 149 DSGSGSLVFTGDT-TINDAFWPVVNSIANLRFLLIETAFPNHERRLAEVSKHLCPSMLAT 207 Query: 225 KKIELINPKNAILTHM 240 + +L ++H+ Sbjct: 208 ELTKLTIAAEVYVSHL 223 >gi|121997107|ref|YP_001001894.1| cyclic-AMP phosphodiesterase [Halorhodospira halophila SL1] gi|121588512|gb|ABM61092.1| cyclic-AMP phosphodiesterase [Halorhodospira halophila SL1] Length = 256 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 21/188 (11%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 R++ + + ++VD G + ++ I VL TH H DHI + + Sbjct: 16 LRTTALL-------VDGWLLVDAGSGVGD-LTAAELGGIRDVLLTHAHLDHIAYLGLMAD 67 Query: 98 YFLKQKR-PIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKS 154 + PI V+A + L + F D T P V+ + + Sbjct: 68 ARIGDDSPPIRVHAPAPTLDALR---AHLFNGVLWPDFTAIPTREEPVLTLHPLAPDQAV 124 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 G + P+ QH + ++G+R + + D P + L + + D LII+ Sbjct: 125 PIGALHVTPLPAQHA-VPAVGYRIEDGHACFVFTGDTGPCPTFWQRLLEAEPPDALIIEC 183 Query: 209 LKNGLHSS 216 S Sbjct: 184 AFPDALRS 191 >gi|172061048|ref|YP_001808700.1| beta-lactamase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993565|gb|ACB64484.1| beta-lactamase domain protein [Burkholderia ambifaria MC40-6] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+ + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGIDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRGSLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + +P H L F F + TDV L D L+++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITTVLSGCDALVLE 165 >gi|237800260|ref|ZP_04588721.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023117|gb|EGI03174.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 252 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 83/219 (37%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T ++VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYILVDCGFSLKETERRLARLGVAASQLSAILVTHEHADHVHGVGLLS-----RRHNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G ++ + Sbjct: 75 PVYLSGGTLRGMRK---------------PVEVAGLLAGGE-----SLRIGALDIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + F F + TD+ ++ + L++ Q LD L+I+A L G + Sbjct: 115 AHDALEPTQFVFSDGERRFGLLTDLGSYCSNVLQRYQGLDALMIEANHCRDMLARGQYPV 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGCETGHLNNHQAASLVSELGWQDLQHLVLAHLS 213 >gi|307298324|ref|ZP_07578128.1| beta-lactamase domain-containing protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916410|gb|EFN46793.1| beta-lactamase domain-containing protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 410 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 57/232 (24%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D T +G VPR+ S+ + G+ + + D G Sbjct: 53 DQMRITFMGTSV---VPRLAQQCN--------------SIFVEL----GNGDSFVFDFGS 91 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA---------- 110 + + +D V TH H DH+ + L + Q R +Y Sbjct: 92 GVSSNYVAVGIPPSRMDKVFLTHLHGDHVGDLITLYCFGPSQDRKTPLYLYGPSGDSPEE 151 Query: 111 -----APDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG----GV 158 A + M+ + E+F + L D + I ++P Sbjct: 152 GTLAFAQNLMELMKWHVEAFSFLSTGLKDGR-----DGYDIIAKELPYMTVGGVAYEENG 206 Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPA-ESLEKLQNLDFLI 205 + H R S+ ++ ++ + D P +++ + +D LI Sbjct: 207 VRITHFPAVHDRNGSISYKLEWNGLSMVFSGDT--IPNYYMIQQAKGVDVLI 256 >gi|171321929|ref|ZP_02910819.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] gi|171092776|gb|EDT38050.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] Length = 258 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 53/254 (20%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + V+ + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEVASGTTTTRVLLDCGFSAKEVERRLGRLNLGIDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRGSLPLYMSWGTARAV------------------GADEADVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + +P H L F F + TDV L D L++++ Sbjct: 111 RDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITTVLSGCDALVLESNHDT 170 Query: 209 -------------LKNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDYDMVLKS 252 + G + H S + L +E ++ + H+ + + + Sbjct: 171 AMLAGSRYPQSLKARIGGNHGHLSNDAAADILASLERSRLQHLVAAHLSQQNNRPELARQ 230 Query: 253 TPSRVVPAFDGMQF 266 + V DG + Sbjct: 231 AFAGV-LGTDGEEV 243 >gi|78779831|ref|YP_397943.1| RNAse Z [Prochlorococcus marinus str. MIT 9312] gi|123553848|sp|Q319D8|RNZ_PROM9 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|78713330|gb|ABB50507.1| RNAse Z [Prochlorococcus marinus str. MIT 9312] Length = 312 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 29/178 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T S ++S+ + D G Sbjct: 1 MNITFLGT--SSGVPSLT---------------RNVSSLALKLSQSSEV--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+++ + I + TH H DHI+G+ GL I++Y + Sbjct: 42 QHQIMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSNGIEIYGPLGLRSFISS 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F L ++P ++ + +EN + ++ +H +I + G+R Sbjct: 102 ALSSSFCKL---SFP--LHFVEVENFASENKILFENNKLKVNCACLKH-KIPAYGYRV 153 >gi|298709066|emb|CBJ31015.1| conserved unknown protein [Ectocarpus siliculosus] Length = 903 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 90/316 (28%), Gaps = 74/316 (23%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNR-------RTRSSLKISRVS--ERGSNTTVIVD 59 LG G++ KNR R + + G+ +++D Sbjct: 570 FLGTGSA---------------APTKNRGCSGILVRIPQAGLVGHNGLAAEGAPLRLLID 614 Query: 60 TGPDF---------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR------ 104 G LRE + +D V +H HADH G+ L + ++ Sbjct: 615 AGEGTLGHFERQFGREGALRE-IRGLDCVWISHKHADHHTGLFRLIAEHHRARQASRPAG 673 Query: 105 --------PIDVYAAPDCMKHLF-------ESFRY----------CFKALDDRTYPPIVN 139 P+ V A + + E Y + + Sbjct: 674 GGPREAAAPLVVVAPSAVLTFVKACKEFSGEDISYQAMRCKDLERAWHWRGGSGTRAGPS 733 Query: 140 PIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 P + + +G + I + +G + L + Y D + Sbjct: 734 PSGRRGSRRGVSALLSGMRSVSVIHCREAYGLVVQLWEDGAKLVYSGDTRPC-DRLVRAG 792 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLK 251 LI +A ++ + H + SE+L+ + +LTH ++ Sbjct: 793 TGAALLIHEATFDDSMQQDAVSKFHCTTSEALEVGRRMRAGEVVLTHFSQRYPRVPVLDT 852 Query: 252 STPSRVVPAFDGMQFS 267 AFDGM + Sbjct: 853 ERAQHFCVAFDGMVLN 868 >gi|297537812|ref|YP_003673581.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297257159|gb|ADI29004.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 259 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 94/257 (36%), Gaps = 51/257 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILGC S G+ RT +S+ + + +++D G Sbjct: 1 MQIKILGC--SGGI--------------GAELRT-TSMLVDQD--------ILIDAGTGV 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFR 123 + E +L ID +L TH H DHI I L + + PI V+A + ++ L Sbjct: 36 GNLSMDE-LLKIDHILLTHSHLDHIAFIPFLLDTVMGIRAEPITVHANKETLETLRL--- 91 Query: 124 YCF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-- 179 + F K D P + + N+V + + P+ H + ++G+ Sbjct: 92 HIFNWKVWPDFNAIPSADNPFLRYNEVKLGETLEFNGRKFTPLPANH-VVPAIGYHVDSG 150 Query: 180 --NVAYCTDVNAFPAE--SLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIEL 229 ++ + D + K++NL +LII+ L S H S + ++ Sbjct: 151 EASLVFTGDTTVCDGLWVEVNKIKNLKYLIIETAFSNSELALAQLSKHLCPSLLMSELAS 210 Query: 230 I------NPKNAILTHM 240 + N +TH+ Sbjct: 211 LAMHHTHNAVEIYITHL 227 >gi|282859461|ref|ZP_06268566.1| ribonuclease Z [Prevotella bivia JCVIHMP010] gi|282587689|gb|EFB92889.1| ribonuclease Z [Prevotella bivia JCVIHMP010] Length = 304 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P + SS + + ++D G MQ+ R ++ I AV +H H Sbjct: 11 CGSALPTMKHASSSQVVEL-----RDKLFMIDCGEGTQMQLRRYRIHFSRIQAVFLSHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH GI G+ F R P+ +YA L ++ + ++L+ + V + Sbjct: 66 GDHCFGIPGMISTFGMTGRTAPLHIYAPASYEPILQQTLHFFCQSLEFK-----VEYHPL 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + +E IP+ R+ GF F Sbjct: 121 DTTKQAVIFEDRSLTVETIPLQH---RVDCCGFLF 152 >gi|171185982|ref|YP_001794901.1| beta-lactamase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935194|gb|ACB40455.1| beta-lactamase domain protein [Thermoproteus neutrophilus V24Sta] Length = 235 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 73/232 (31%), Gaps = 48/232 (20%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP--- 112 ++VD G Y ++ + + DA++ +H H DHI G+ + R + V A Sbjct: 30 ILVDAGECTYARLTQCGLPWPDAIVISHRHGDHILGLPTFMLLAKRLGRRLTVVANREAA 89 Query: 113 ------DCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + Y F + +E + Sbjct: 90 EAARTLAVATGIENALAYIDFVEASGEVVV----------GSTKLKFAKTAHTVETTAVR 139 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHS-SHFS 219 +HG V Y +D A +E + D LI + + H H + Sbjct: 140 VEHGGRC--------VVYSSDTAP-TAGVVELARGCDLLIHETSGNPGQEEEAHRVGHST 190 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 ++++ + L +H L+ P R+ PA D PIP Sbjct: 191 TADAVNIAREAGVR--YLMPVHYYLE--------PPRIPPAID---IIVPIP 229 >gi|307133238|ref|YP_003885254.1| Ribonuclease Z [Dickeya dadantii 3937] gi|306530767|gb|ADN00698.1| Ribonuclease Z [Dickeya dadantii 3937] Length = 308 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 72/304 (23%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M+ LG A GVP R +S+ + R + + D Sbjct: 1 MERCMELIFLGTNA--GVPT--------------KERNVTSIALDLHGIRPAF--WLFDC 42 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA----P 112 G Q+LR V ++ + TH H DH+ G+ GL P+ +Y Sbjct: 43 GEGTQHQILRTPVKPGKLEKIFITHLHGDHLFGLPGLLCSRSMAGIETPLTLYGPAGLKA 102 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIE--AIPILQ 166 L S + L+ P + + +++ + G IE P Sbjct: 103 FVEATLTLSGSWLTYPLEVVEVAPGTVFEDHQFRVTAHELSHTLYCVGYRIEERPKPGPL 162 Query: 167 QHGRISSLGFRFG---------------------------------NVAYCTDVNAFPAE 193 +++ G + G ++A D P Sbjct: 163 DVRKLAVEGVKPGAYFQQLKRGETVTLDDGRVLNGWDYVGPGLPGKSLAIFGDTRPTPEA 222 Query: 194 SLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 L+ +D ++ +A G H + ++ K I+TH + Sbjct: 223 -LKLAAGVDVMVHEATLEGAMAERADERGHSTTLQTAATARDAGAKRLIITHFSARYGRE 281 Query: 248 MVLK 251 +++ Sbjct: 282 DLIR 285 >gi|269302897|gb|ACZ32997.1| ribonuclease Z [Chlamydophila pneumoniae LPCoLN] Length = 307 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 94/325 (28%), Gaps = 99/325 (30%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M ILGC +S PT +N+ R + ++ D Sbjct: 1 MSSR-ELIILGC-SSQQ------------PTRTRNQ--------GAYLFRWNGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMK 116 G Q + + +++ + +H H DH G+ + L K PI Y K Sbjct: 39 GEGTQRQFIFANIAPTTVNRIFVSHFHGDHCLGLGSMLMRLNLDKVSHPIHCYYPASGKK 98 Query: 117 HL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + PI ++E+ G QH ++ +LG Sbjct: 99 YFDRLRYGTIYHETIQVVEHPISEEGIVED----------FGSFRIEARRLQH-QVDTLG 147 Query: 176 FRF-----------------------------------GNVAYCTDVN------------ 188 +R G+ Y +DV+ Sbjct: 148 WRITEPDTIKFLPKELESRGIRGPIIQDLIRDQEISIGGSTVYLSDVSYVRKGDSIAIIA 207 Query: 189 -AFP-AESLEKLQNLDFLIIDALKNGLHS----SHFSL--SESLKKIELINPKNAILTHM 240 P +++ +N ++ ++ H SHF + ++ + + ILTH Sbjct: 208 DTLPCQAAIDLAKNSCMMLCESTYLEQHRHLAESHFHMTAKQAATLAKRAATQKLILTHF 267 Query: 241 H-----VDLDYDMVLKSTPSRVVPA 260 +D Y P V A Sbjct: 268 SARYLNLDDFYKEASAVFP-NVSVA 291 >gi|330817628|ref|YP_004361333.1| hypothetical protein bgla_1g27620 [Burkholderia gladioli BSR3] gi|327370021|gb|AEA61377.1| hypothetical protein bgla_1g27620 [Burkholderia gladioli BSR3] Length = 258 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 56/213 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG--- 61 FT LG G S G + + S + T V++D G Sbjct: 1 MRFTSLGSG-SEG-----------------------NALVVEASSGTTTTRVLLDCGFSA 36 Query: 62 --PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 D + + +DA+L TH H+DHI + ++ I ++ + K + Sbjct: 37 KELDRRLTRVGLGSCELDAILITHEHSDHIG-----SALTVARRFGIPLFMSWGTAKAVG 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 V+ V+ ++ + G ++ +P H L F F Sbjct: 92 AD-------------SAAVDLHVLWGDE-----TTPIGDLQILPYTVPHDAREPLQFVFS 133 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD L D L+++A Sbjct: 134 DGAARLGVLTDAGMSTPHLCGVLSGCDALVLEA 166 >gi|86360332|ref|YP_472220.1| hypothetical protein RHE_PE00054 [Rhizobium etli CFN 42] gi|86284434|gb|ABC93493.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 276 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R ++ D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGKHRLLFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + + IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLTPHEGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 H ++G+R ++A D+ P SLE +Q D ++ D Sbjct: 150 IKTFTLNHPG-GAIGYRVEWQGRSIALIYDIEHIPGSYDPVSLEMMQGADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWEHGTELAKMAGAKCFALFH 241 >gi|295396716|ref|ZP_06806862.1| metallo-beta-lactamase [Brevibacterium mcbrellneri ATCC 49030] gi|294970462|gb|EFG46391.1| metallo-beta-lactamase [Brevibacterium mcbrellneri ATCC 49030] Length = 274 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 27/224 (12%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADH---IHGID 93 +S + + T +++D G VL IDAV +H H DH + G+ Sbjct: 22 ASCYVVSAHDGEKTTNIVLDLGSGALGPLQTVLTH--TQIDAVFLSHLHPDHCLDVTGLY 79 Query: 94 GLRGY---FLKQKRP---IDVYAAPDCMKHLFESFRYC--FKALDDRTYPPIVNPIVIEN 145 LR Y F P + VY L + R A + E Sbjct: 80 VLRTYDPEFFFADTPLPKLPVYGPGGSEDRLQAAHRTPAGLAAGPGKNADESTLNSAFEF 139 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQN 200 D+ + G + IP L +H + + R + + Y D +A + Sbjct: 140 KDLTPGSRHTIGPLTVIPHLVEH-PVETYALRIEHANGAVLTYSGDSDAC-DGLVAAAHG 197 Query: 201 LDFLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHM 240 D + +A + H + + + + + K +LTH+ Sbjct: 198 ADLFVCEAAFEEGRDTVRGIHLTGKRAGEVAQAASVKRLMLTHI 241 >gi|291522088|emb|CBK80381.1| RNAse Z [Coprococcus catus GD/7] Length = 304 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 87/293 (29%), Gaps = 86/293 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P R +SL + + +++++D G Sbjct: 2 LDLCLLGTGGMMPLP----------------YRWLTSLMLRY-----NGSSLLIDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGI----------DGLRGYFLKQKRPIDVYAA 111 + +RE+ +D + TH H DHI G+ D + I Sbjct: 41 QI-AIREKGWSFRPLDIICITHFHGDHISGLPGILLAMSNSDRTEPLTM-----IGPKGL 94 Query: 112 PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----- 161 +K L F F L + + VI+ V + G I Sbjct: 95 ERVVKALRVIAPELPFEIKFIELTEPQQQIRLQGYVIDAFKVNHRVACYGYSISIERAGM 154 Query: 162 ----------IPILQ------------QHGRIS----SLG-FRFG-NVAYCTDVNAFPAE 193 +P+ + GRI LG R G V Y TD Sbjct: 155 FDVEKARQNEVPMPLWSKLQKGETIRTEDGRIYQPEMVLGPARKGLKVTYTTDTRP-TDS 213 Query: 194 SLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + + D I + + N + H + E+ + + K LTH Sbjct: 214 IVRNARGSDLFICEGMYGEKGDVNNAVKYKHMTFEEAGRLAKQAGVKELWLTH 266 >gi|301762826|ref|XP_002916832.1| PREDICTED: zinc phosphodiesterase ELAC protein 1-like [Ailuropoda melanoleuca] gi|281342229|gb|EFB17813.1| hypothetical protein PANDA_004947 [Ailuropoda melanoleuca] Length = 363 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 85/337 (25%), Gaps = 122/337 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P +S + R + D G Sbjct: 2 SMDVTFLGTGAAYPSPTRG-----------------ASALVLRC----EGECWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVTKQPIEIYGPAGLR 100 Query: 116 KHLFES---------FRYCF------------KALDDRTYPPIVNPIVIENNDVPICMKS 154 ++ + F Y + L + Y + E I + S Sbjct: 101 DFIWRTMELSHTELVFPYVVHELVPTADQCPTEELKECMYVSKTDSHPKEGQGRTILLDS 160 Query: 155 AGGV--------IEAIPILQQHGRISSLGF------RFGNV--------------AY--- 183 H RI S GF R G + AY Sbjct: 161 EENSYLLVDDEQFVVKAFRLFH-RIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKL 219 Query: 184 -------------------------------CTDVNA-FPAESLEKLQNLDFLIIDAL-- 209 D + ++ D LI +A Sbjct: 220 KNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGMKLCFEADLLIHEATLD 279 Query: 210 -----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 K H H + + +L K +LTH Sbjct: 280 DAQMDKAKEHG-HSTPQMAAAFAKLCQAKRLVLTHFS 315 >gi|69247568|ref|ZP_00604402.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257880372|ref|ZP_05660025.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882233|ref|ZP_05661886.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257891030|ref|ZP_05670683.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|260562327|ref|ZP_05832841.1| metallo-beta-lactamase YycJ [Enterococcus faecium C68] gi|261208374|ref|ZP_05923024.1| metallo-beta-lactamase YycJ [Enterococcus faecium TC 6] gi|289566833|ref|ZP_06447243.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Enterococcus faecium D344SRF] gi|293553008|ref|ZP_06673653.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1039] gi|293559837|ref|ZP_06676352.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1162] gi|293567709|ref|ZP_06679052.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1071] gi|293570845|ref|ZP_06681892.1| metallo-beta-lactamase YycJ [Enterococcus faecium E980] gi|294616681|ref|ZP_06696451.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1636] gi|294619186|ref|ZP_06698672.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1679] gi|294623106|ref|ZP_06701992.1| metallo-beta-lactamase YycJ [Enterococcus faecium U0317] gi|314939993|ref|ZP_07847188.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|314943536|ref|ZP_07850301.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|314948946|ref|ZP_07852313.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] gi|314950765|ref|ZP_07853841.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|314994101|ref|ZP_07859418.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|314998032|ref|ZP_07862924.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|68194792|gb|EAN09269.1| Beta-lactamase-like [Enterococcus faecium DO] gi|257814600|gb|EEV43358.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257817891|gb|EEV45219.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257827390|gb|EEV54016.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|260073251|gb|EEW61592.1| metallo-beta-lactamase YycJ [Enterococcus faecium C68] gi|260077435|gb|EEW65154.1| metallo-beta-lactamase YycJ [Enterococcus faecium TC 6] gi|289161364|gb|EFD09254.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Enterococcus faecium D344SRF] gi|291589644|gb|EFF21449.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1071] gi|291590435|gb|EFF22174.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1636] gi|291594568|gb|EFF25959.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1679] gi|291597475|gb|EFF28640.1| metallo-beta-lactamase YycJ [Enterococcus faecium U0317] gi|291602814|gb|EFF33021.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1039] gi|291606201|gb|EFF35620.1| metallo-beta-lactamase YycJ [Enterococcus faecium E1162] gi|291609113|gb|EFF38388.1| metallo-beta-lactamase YycJ [Enterococcus faecium E980] gi|313587962|gb|EFR66807.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|313591468|gb|EFR70313.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133B] gi|313597045|gb|EFR75890.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133A] gi|313597774|gb|EFR76619.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133C] gi|313640763|gb|EFS05343.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a04] gi|313644645|gb|EFS09225.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0082] Length = 269 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 56/247 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 SL I ++VD G Q+ R +D +L TH H DHIHG+ Sbjct: 21 SLYIE-----SEKKRLLVDAGLSGKKITSLMAQIDRTP-DQLDGILVTHEHRDHIHGVG- 73 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K +DV+A + + P I N V + + + Sbjct: 74 ----VLARKYHLDVFANQQTWEAME---------------PLIGNVPVEQKHLFEMGKVR 114 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI---- 205 G I+ H + +RF TD ++N D +L+ Sbjct: 115 TFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYLMESNH 174 Query: 206 -IDALKNGLHS-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVL 250 ++ L+ G + H S + +L ++I K L H+ + + + Sbjct: 175 DLEMLRMGPYPWNLKQRILGDRGHLSNEDGALVMTDVIGNRTKRIYLGHLSKENNMKELA 234 Query: 251 KSTPSRV 257 T V Sbjct: 235 HLTMENV 241 >gi|325182302|emb|CCA16756.1| PREDICTED: similar to AGAP009743PA putative [Albugo laibachii Nc14] Length = 718 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 95/312 (30%), Gaps = 69/312 (22%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D T LG G ++ P R S + I + +++D G Sbjct: 409 DIPRITFLGTGCAI----------------PSKFRNVSGIHIVLHGLQRCGG-LLLDCGE 451 Query: 63 DFYMQVLREQ----------VLSIDAVLYTHPHADHIHGI-------------DGLRGYF 99 Q+ R + + + +H HADH G+ D L Sbjct: 452 GSLGQLYRAVGGNRLLLSRVISQLQCIWISHNHADHHLGVLRILSERSNLGFDDPLLIIA 511 Query: 100 LKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK-SAGG 157 Q R ++ Y D + SFR+ + D+ + + + + Sbjct: 512 PNQIRYWLEEYCQIDL--SIQSSFRFVDNRIFDQNDSNFDANHQTRRDTLNFLHEKLSLK 569 Query: 158 VIEAIPILQQH----------GRISSL------GFRFGNVAYCTDVNAFPAESLEKLQNL 201 IP+ H GR+SS R VAY D + Sbjct: 570 SFLTIPVKHTHLSYAAVLEYGGRLSSTIESEQEENRIYKVAYSGDCRPSADLVSAAMD-- 627 Query: 202 DFLII------DALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP 254 FL I D L+ H + +E+++ + K+ ILTH V S Sbjct: 628 AFLFIHEATFDDTLQKEAKDKCHSTFTEAMQVVRNARAKHVILTHFSQRYPTISVSDSDV 687 Query: 255 SRVVPAFDGMQF 266 V+ AFD + Sbjct: 688 LNVLTAFDLLTL 699 >gi|104781771|ref|YP_608269.1| ribonuclease Z [Pseudomonas entomophila L48] gi|122403296|sp|Q1IA50|RNZ_PSEE4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|95110758|emb|CAK15471.1| putative Ribonuclease Z [Pseudomonas entomophila L48] Length = 320 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 58/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP + S + V E + +VD G Sbjct: 1 MDLQFLGT--SSGVPT---------------KARNVSA--TAVIEATGHGWYLVDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + + A+ TH H DH G+ GL R P+ + + + Sbjct: 42 QHQLLRSPLSMRDLRAIFITHVHGDHCFGLPGLLASAGMSGRKAPLPLIMPTALHDWVRQ 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 A D P + +E D C G I+ + H R+ S GF F Sbjct: 102 GL-----AASDTYLPFELQLQALETFDGFTC-----GNIQVGKVELSH-RVPSYGFVFD 149 >gi|227512142|ref|ZP_03942191.1| ribonuclease Z [Lactobacillus buchneri ATCC 11577] gi|227524129|ref|ZP_03954178.1| ribonuclease Z [Lactobacillus hilgardii ATCC 8290] gi|227084536|gb|EEI19848.1| ribonuclease Z [Lactobacillus buchneri ATCC 11577] gi|227088707|gb|EEI24019.1| ribonuclease Z [Lactobacillus hilgardii ATCC 8290] Length = 314 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 88/293 (30%), Gaps = 75/293 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N+ + D G Sbjct: 2 MQIEFLGTGAGS----------------PGKFRNVSSLALRLLDE--INSVWLFDVGEGT 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL-- 118 Q+LR + ID + +H H DHI G+ GL Q P+D+Y +++ Sbjct: 44 QHQILRSTIRPRKIDKIFISHLHGDHIFGLPGLLSSRSFQGGFEPLDIYGPKGIKEYVEV 103 Query: 119 -------------------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 ++ F+ Y ++ I + + G + Sbjct: 104 SLKISESHLSYKIRFHELTKQTNGLIFEDNKFSVYAAPLD-HRILSIGYRVVEHDHPGEL 162 Query: 160 EAIPILQQH-GRISSLG-FRFGNVAYCTDVNAFP-----------------------AES 194 + Q H G + G D + Sbjct: 163 MVDKLTQLHIPSGPVYGRLKKGETVTLDDGRVVDGKQMIGPAQPGRIVTIIGDTRKTENA 222 Query: 195 LEKLQNLDFLI----IDALKNGLHSSHFSLS--ESLKKIELINPKNAILTHMH 241 ++ Q+ D L+ + + L SH+ + ++ + + + K +L H+ Sbjct: 223 VKLAQDADVLVHESTLGKSETKLARSHYHSTNVQAAQIAKKAHVKQLLLNHIS 275 >gi|149181631|ref|ZP_01860124.1| ribonuclease Z [Bacillus sp. SG-1] gi|148850609|gb|EDL64766.1| ribonuclease Z [Bacillus sp. SG-1] Length = 307 Score = 60.5 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA GVP +N +S+ + + ERG + + D G Sbjct: 1 MDLLFLGTGA--GVP-----------AKSRNV---TSIALKLLEERG--SVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL G Q + VY P + + Sbjct: 43 QHQILHTSLKPRKIEKIFITHLHGDHIFGLPGLLGSRSFQGGETALTVYGPPGIREFIEV 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + ++ P+ IE + + +EA + + G+R Sbjct: 103 SLS--------VSGTRLLYPLHIEEIEEGSIFEDDQFSVEACKLDHA---LPCFGYRI 149 >gi|328948108|ref|YP_004365445.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] gi|328448432|gb|AEB14148.1| beta-lactamase domain protein [Treponema succinifaciens DSM 2489] Length = 314 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 67/212 (31%), Gaps = 26/212 (12%) Query: 56 VIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYA 110 ++D G R+ + +H H DHI G +F + P ID+Y Sbjct: 75 FLLDCGTGLREFSVAGRQPENGHYNIFLSHFHWDHIQGF----PFFGQSFSPNSKIDIYT 130 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + E + + + N + ++ G IE + G Sbjct: 131 PFADAEEYLERQSSLPYFPINACFESVKNQLSFHLMQEGNPIEIGGLKIECHRMFHP-GD 189 Query: 171 ISSLGFR--FGNVAYCTDV----NAFPA--ESLEKLQNLDFLIIDALKNGLHSS------ 216 S F Y TDV + F + +N D L+ D+ ++ Sbjct: 190 SYSYSFEEDGKRFIYSTDVELQTSDFDKGCARNKFFENADVLVFDSQYTNPEAAKKVNWG 249 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 H S S ++ N KN H + +YD Sbjct: 250 HNSFSSAIDFASNWNIKNLYF--FHHEPNYDD 279 >gi|15617949|ref|NP_224233.1| ribonuclease Z [Chlamydophila pneumoniae CWL029] gi|15835562|ref|NP_300086.1| ribonuclease Z [Chlamydophila pneumoniae J138] gi|16753020|ref|NP_445293.1| ribonuclease Z [Chlamydophila pneumoniae AR39] gi|33241364|ref|NP_876305.1| ribonuclease Z [Chlamydophila pneumoniae TW-183] gi|41017588|sp|Q9Z9F6|RNZ_CHLPN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|4376278|gb|AAD18178.1| Sulphohydrolase/Glycosulfatase [Chlamydophila pneumoniae CWL029] gi|7189668|gb|AAF38556.1| AtsA/ElaC family protein [Chlamydophila pneumoniae AR39] gi|8978400|dbj|BAA98237.1| sulphohydrolase/glycosulfatase [Chlamydophila pneumoniae J138] gi|33235872|gb|AAP97962.1| putative sulphohydrolase/glycosulfatase [Chlamydophila pneumoniae TW-183] Length = 307 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 94/325 (28%), Gaps = 99/325 (30%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M ILGC +S PT +N+ R + ++ D Sbjct: 1 MSSR-ELIILGC-SSQQ------------PTRTRNQ--------GAYLFRWNGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMK 116 G Q + + +++ + +H H DH G+ + L K PI Y K Sbjct: 39 GEGTQRQFIFANIAPTTVNRIFVSHFHGDHCLGLGSMLMRLNLDKVSHPIHCYYPASGKK 98 Query: 117 HL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + PI ++E+ G QH ++ +LG Sbjct: 99 YFDRLRYGTIYHETIQVVEHPISEEGIVED----------FGSFRIEAQRLQH-QVDTLG 147 Query: 176 FRF-----------------------------------GNVAYCTDVN------------ 188 +R G+ Y +DV+ Sbjct: 148 WRITEPDTIKFLPKELESRGIRGLIIQDLIRDQEISIGGSTVYLSDVSYVRKGDSIAIIA 207 Query: 189 -AFP-AESLEKLQNLDFLIIDALKNGLHS----SHFSL--SESLKKIELINPKNAILTHM 240 P +++ +N ++ ++ H SHF + ++ + + ILTH Sbjct: 208 DTLPCQAAIDLAKNSCMMLCESTYLEQHRHLAESHFHMTAKQAATLAKRAATQKLILTHF 267 Query: 241 H-----VDLDYDMVLKSTPSRVVPA 260 +D Y P V A Sbjct: 268 SARYLNLDDFYKEASAVFP-NVSVA 291 >gi|328882374|emb|CCA55613.1| Ribonuclease Z [Streptomyces venezuelae ATCC 10712] Length = 301 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 83/287 (28%), Gaps = 69/287 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGQGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q+LR V ID + TH H DH G+ G+ + P V A P +H Sbjct: 39 GEGTQRQMLRAGVAAHDIDRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQH 98 Query: 118 LFESFRYCFKALDDRTY----------PPIVNPIVIENNDVPICMKSAGGVIE------A 161 FE RY + + + ++ + ++S G + Sbjct: 99 FFERLRYATAYRETVRLTEGPVAADGPLAVTDAYTLDACRLSHPVESYGYRLTEPDGRRI 158 Query: 162 IPILQ--------QHGRISSLGF-------------RFGNVAYCTDVNAFPAESLEKLQN 200 +P GRI G R A+ D + Sbjct: 159 LPERLAAHGITGPDVGRIQREGVLDGVTLDEVSEVRRGQRFAFVMDT-RLCDGVHALAEG 217 Query: 201 LDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ ++ H + ++ ++ +LTH Sbjct: 218 ADMLVIESTFLDEDVRLATDHGHLTAGQAAAVARDAGVRHLVLTHFS 264 >gi|304404065|ref|ZP_07385727.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304347043|gb|EFM12875.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 245 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 82/206 (39%), Gaps = 20/206 (9%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRP 105 + +++D G + + + +DAVL +H H DH+ G++ L + F+ Q++P Sbjct: 26 DADSFRLLLDCGITGPAALHQLGIRFGDLDAVLVSHTHGDHVGGLEELAFQMMFVHQRKP 85 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS---AGGVIEAI 162 + +Y + L+E + K + ++ + ++P+ + G V+E I Sbjct: 86 V-LYLPQPLREPLWE---HTLKGGLTQGPLQSLDDF-FDVREMPVGEPTTIAPGLVVEPI 140 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHSSHFS 219 GR+S G Y D+ F E L++L + + + D H Sbjct: 141 QTEHIEGRLSYSFLINGTFFYSADMK-FNPELLQQLVDERGVQLIFHDCQLIAPGVVHAC 199 Query: 220 LSESLKKIELINPKNAILTHMHVDLD 245 + E L E I +T + D Sbjct: 200 IDELLTLPEHIQA----ITKLMHYGD 221 >gi|15669564|ref|NP_248377.1| hypothetical protein MJ_1374 [Methanocaldococcus jannaschii DSM 2661] gi|41018432|sp|Q58769|Y1374_METJA RecName: Full=Uncharacterized protein MJ1374 gi|1592019|gb|AAB99381.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 266 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 75/297 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT------TVI 57 LGCG G W I++ G + Sbjct: 2 RVEIIFLGCG--------GGRWAT----------------ITQKKATGGFRIHTNELRMH 37 Query: 58 VDTGPD--FYMQVLREQVLSIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKR 104 VD GP + L+ +A+ +H H DH G+ RG FL Sbjct: 38 VDPGPGAIVRLNELKISPWRTNALFISHCHPDHYTDGEIIVEAITQGMTKKRGVFLGSLS 97 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ + +++ + YP + Sbjct: 98 VVEGFGE---YEYVVSKYHQSKLEEVRVLYPG---------------DSAELYDTTIKAT 139 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--NGLHSSHF 218 +HG +GFR G++ Y +D P +E + LI + ++ N H Sbjct: 140 HTKHGDPFGIGFRLSTIYGDIGYTSDTEFIPQL-IEDFDGVRILIANIVRKKNERIKGHL 198 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 ++++ I + P+ I+ HM V + + + + ++T V+PA G++ Sbjct: 199 CSNDAIDLINSMNKKPELLIMNHMGVKMTNPQIEAEYISQNTGIEVIPARLGLKVEL 255 >gi|167747102|ref|ZP_02419229.1| hypothetical protein ANACAC_01814 [Anaerostipes caccae DSM 14662] gi|167654062|gb|EDR98191.1| hypothetical protein ANACAC_01814 [Anaerostipes caccae DSM 14662] Length = 259 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 43/228 (18%) Query: 53 NTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T ++VD G + L + + +L TH H+DHI G+ + ++ + Sbjct: 21 ETKLLVDCGISAKRIEKSLDELDTRASELSGILITHEHSDHIKGLG-----VMLRRYGLP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A + + D Y V+ + + + +EA + Sbjct: 76 VFATAKTIDAVL-----------DSRYIGKVDKDLFHPIEADHPFQLDDITVEASHVWHD 124 Query: 168 HGRISSLGFRFGNV--AYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS---- 215 F + TD+ + +EK+++ L ++A L+ G + Sbjct: 125 AADPVCYSFYSEGFKASIATDLGDYDEYLVEKIRDSHILFVEANHDVNMLQVGSYPYYLK 184 Query: 216 -------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + IE + L H+ + ++ + T Sbjct: 185 RRILGDHGHLSNERCAQLIEDTVTEKTQKVYLGHLSKENNFAELAYET 232 >gi|313890254|ref|ZP_07823888.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121359|gb|EFR44464.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 270 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G +L E + +DA+L TH H+DHI G+ L +K + Sbjct: 26 PQKRILVDAGLTGKKIISLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VLARKYHL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + + K + Y G ++ Sbjct: 81 DIYANQKTWQIIDDR-NMIGKIDTTQKY------------IFDRDKVMTFGDLDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +RF + TD + N D +LI I+ L++G + Sbjct: 128 SHDAADPQFYRFMKDNKSFVMLTDTGYVSDRMSGIISNADAYLIESNHDIEILRSGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I I K L H+ +L + + Sbjct: 188 SLKQRILSDKGHLSNEDGAGAMIRSIGNKTKKIFLGHLSKENNIKELAHMTMENQL 243 >gi|209966191|ref|YP_002299106.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] gi|209959657|gb|ACJ00294.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW] Length = 290 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 81/262 (30%), Gaps = 50/262 (19%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQV----LSIDA-VLYTHPHADHIHGIDGLRG 97 S + R +I D G + + L+ +DA + TH H DH+ G+ Sbjct: 41 SCIEVRCGGRLLIFDAGTGIRLLGEALQAGELADGTPLDADLFLTHTHYDHVGGLPFFTP 100 Query: 98 YFLKQKRPI---DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + R I ++ + + + P P+ + + Sbjct: 101 AYDPHNRLILWEGHLGPERTLQQVLDQL---------MSAPLFPVPVNLIETSCRYRKFA 151 Query: 155 AGGVIEAIP------ILQQHGRISSLGFRFG----NVAYCTDVNAF----PAESLEKLQN 200 AG +E P H ++ G+R V TD +E ++ Sbjct: 152 AGDTLEPRPGIRLRTAPLNHPN-NATGYRVDYGGRAVCIVTDTEHQRGVRDPRVVELVRG 210 Query: 201 LDFLIIDAL----KNGLH--SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV----- 249 D +I D+ + H H + E+ + +L H D ++ + Sbjct: 211 ADLMIYDSTYTDEEYERHVGWGHSTWQEACRVAAEAGVARTVL--FHHDPAHNDLALDAI 268 Query: 250 ---LKSTPSRVVPAFDGMQFSS 268 ++ + A +GM + Sbjct: 269 GAAAETMRPGTLLAAEGMVLTL 290 >gi|269837101|ref|YP_003319329.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786364|gb|ACZ38507.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 267 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 26/218 (11%) Query: 52 SNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK------ 103 T V++D GP VLR+ + ++DA++ +H HADH L K Sbjct: 27 EGTRVVLDCGPGILP-VLRDLTDMRTLDAIIISHLHADHTL---DLVPLRYGLKYGPGAT 82 Query: 104 -RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 R + V+ P + L + + + + D + I Sbjct: 83 DRRLPVFLPPGGLAFL-DRIAGALATDGEPAGDFFESVFALTEYDPASTLTVGTLTIRFH 141 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 P I R + + Y D P + D +I +A N S Sbjct: 142 PTRHA---IPCWAMRIEDGEHSLVYLADTAPTPDVA-RFAHGADLVICEATLNDPEFSAT 197 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + ++ + + +LTH V+L D + Sbjct: 198 VGHLTARQAGEMAAAAEARTLLLTHYWVELGRDRLRAE 235 >gi|317049963|ref|YP_004117611.1| ribonuclease Z [Pantoea sp. At-9b] gi|316951580|gb|ADU71055.1| ribonuclease Z [Pantoea sp. At-9b] Length = 303 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 36/180 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA G P + +R +++ ++ T + D G Sbjct: 1 MQLTFLGTGA--GAPSL--------------QRNVTAIALTL---SKRGDTWLFDCGEAT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q +R + ++ + TH H DHI G+ GL R K P+ +Y + + Sbjct: 42 QHQYMRSTLKPSKLEKIFITHLHGDHIFGLPGLLTSRSMA-GLKEPLTIYGPQGIRQFID 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + +E ++ + G H + G+R Sbjct: 101 TAL----------SLSGSYTSFPLEIVEIAAGLVFDDGDFRVTAWPMNH-IVECYGYRIE 149 >gi|260429819|ref|ZP_05783795.1| coenzyme PQQ biosynthesis protein B [Citreicella sp. SE45] gi|260419302|gb|EEX12556.1| coenzyme PQQ biosynthesis protein B [Citreicella sp. SE45] Length = 298 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 97/318 (30%), Gaps = 74/318 (23%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTG 61 + ILG A G+P+ C +T+SSL +S + Sbjct: 2 QFRARILGAAAGGGLPQWNCGCENCRLARAGEIPAQTQSSLAVSANGTDWAILN----AS 57 Query: 62 PDFYMQV----------LREQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPI-- 106 PD Q+ LRE + + +VL T+ DH+ G+ ++ + L I Sbjct: 58 PDIRAQLATTPELHPTGLRE--MPLRSVLLTNGDIDHVAGLLTLREMQPFTLFATAGIHE 115 Query: 107 -----DVYA---------APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 ++A A ++ E F L P P+ +E ++V + Sbjct: 116 VLAVNPIFAALNPSVVTRAEVALERPAEIAPGLFATLFA---VPGKVPLYMEGDEVQTDL 172 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 + + + + G ++ Y +L+ + D Sbjct: 173 VGE----QTVGVELRAGDETAF--------YIPGCAMLNDALRHRLEGAALVFFDGTLWR 220 Query: 210 -----------KNGLHSSHFSLSES---LKKIELINPKNAILTHMHVDLDY-----DMVL 250 K G H S+S + + E + + HM+ + Sbjct: 221 DDEMVRAGLGQKTGRRMGHMSMSGADGSIAAFEHMKIGRKVFVHMNNTNPVLRPGSEERR 280 Query: 251 KSTPSRVVPAFDGMQFSS 268 + + DGM+ ++ Sbjct: 281 AAEKAGWTIGRDGMEVTA 298 >gi|326793236|ref|YP_004311057.1| beta-lactamase [Clostridium lentocellum DSM 5427] gi|326544000|gb|ADZ85859.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427] Length = 243 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 75/227 (33%), Gaps = 26/227 (11%) Query: 39 RSSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +S I + + +++D G + Q L E V I ++ TH H DH+ + Sbjct: 17 NTSAYI-----KKEDRMLLIDCGGTVFHELQKQKLLEGVNQI-YMIITHTHPDHVGSVGE 70 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + YF + + + + F + + + N Sbjct: 71 VIFYFYY------LLGKKATIIYPHKEHIAKFLESVGVSGEMYELLAINDENQEIYIQDQ 124 Query: 155 AGGVIEAIPILQQH-GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN--LDFLIID 207 G I I H I + GF + Y D N E ++ L+N +D + D Sbjct: 125 YLGKIGIRHIPVTHVDTIEAYGFILKIQGKTLYYSGDANQLSTEVIQGLKNGQIDVIYHD 184 Query: 208 A--LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 L +SH SL + + IE H+ + +LK Sbjct: 185 TCGLDYEK-NSHMSLKKLKEMIEEPYRNKVYCMHLDKHITKAEILKE 230 >gi|322617060|gb|EFY13966.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617634|gb|EFY14533.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322634466|gb|EFY31199.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639176|gb|EFY35868.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640039|gb|EFY36706.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645740|gb|EFY42264.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651515|gb|EFY47890.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322659428|gb|EFY55675.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665888|gb|EFY62071.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669872|gb|EFY66013.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673858|gb|EFY69955.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678616|gb|EFY74672.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683588|gb|EFY79602.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|323193502|gb|EFZ78707.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198407|gb|EFZ83509.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201921|gb|EFZ86983.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323218286|gb|EGA02996.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323227392|gb|EGA11557.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232281|gb|EGA16384.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235685|gb|EGA19769.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241154|gb|EGA25190.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244896|gb|EGA28898.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250015|gb|EGA33909.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251627|gb|EGA35495.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323260654|gb|EGA44262.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323270801|gb|EGA54239.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 305 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 81/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVMLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA ++ H S ++ + I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREADVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|323499052|ref|ZP_08104032.1| hypothetical protein VISI1226_20979 [Vibrio sinaloensis DSM 21326] gi|323315887|gb|EGA68918.1| hypothetical protein VISI1226_20979 [Vibrio sinaloensis DSM 21326] Length = 314 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 34/218 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G Y++ + + +D TH H DH++ + L GYF ++ P+D Sbjct: 60 GKSRILIDAGGGVYLRFGQAGAKLEDLDFFGITHFHTDHVNDLPALLKGGYFFERNDPLD 119 Query: 108 VYAA------PDCMKHLFESFRY---CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + P ++ +F F L+ Y IE DVP V Sbjct: 120 IAGPEAGSAFPSLTGYIKANFDRETGAFAYLNG-LYDGTDGLFPIELTDVPTDSADPVLV 178 Query: 159 -----IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII--- 206 + I HG + L +R G + D N ++ + D L++ Sbjct: 179 YQQDGLTITAIGIPHGDVPCLSYRIESEDGVIVVSADQNGSDKRFIDFAKGADILMMPMA 238 Query: 207 -----DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D + + +H+ + K ++ + PK +L H Sbjct: 239 IHEDADGVSSFMHAKPSVIG---KIVQQVQPKMLVLNH 273 >gi|330989395|gb|EGH87498.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 252 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 34/166 (20%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T V+VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYVLVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + P+ ++ + G + + Sbjct: 75 PVYLSSGTLRGMRK---------------PVEVAGLLAGGE-----SLQVGALGIDVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + F F + TD+ ++ + L++ Q LD L+I+A Sbjct: 115 AHDALEPTQFVFNDGKRRFGLLTDLGSYCSNVLQRYQGLDALMIEA 160 >gi|15674630|ref|NP_268804.1| hypothetical protein SPy_0530 [Streptococcus pyogenes M1 GAS] gi|19745652|ref|NP_606788.1| hypothetical protein spyM18_0596 [Streptococcus pyogenes MGAS8232] gi|21909910|ref|NP_664178.1| VicX protein [Streptococcus pyogenes MGAS315] gi|28896391|ref|NP_802741.1| hypothetical protein SPs1479 [Streptococcus pyogenes SSI-1] gi|56808930|ref|ZP_00366638.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Streptococcus pyogenes M49 591] gi|71903091|ref|YP_279894.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|71910250|ref|YP_281800.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94988067|ref|YP_596168.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94989947|ref|YP_598047.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94991953|ref|YP_600052.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94993853|ref|YP_601951.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|139474238|ref|YP_001128954.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|209559001|ref|YP_002285473.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes NZ131] gi|306827820|ref|ZP_07461090.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pyogenes ATCC 10782] gi|13621743|gb|AAK33525.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19747783|gb|AAL97287.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|21904098|gb|AAM78981.1| VicX protein [Streptococcus pyogenes MGAS315] gi|28811642|dbj|BAC64574.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71802186|gb|AAX71539.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS6180] gi|71853032|gb|AAZ51055.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94541575|gb|ABF31624.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS9429] gi|94543455|gb|ABF33503.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94545461|gb|ABF35508.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94547361|gb|ABF37407.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|134272485|emb|CAM30748.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] gi|209540202|gb|ACI60778.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes NZ131] gi|304429990|gb|EFM33029.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus pyogenes ATCC 10782] Length = 269 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 25 PKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA L + K + + G ++ Sbjct: 80 DIYANEKTW-QLMDECNMLGKLDASQK------------HIFQRDKVLTFGDVDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + N K L H+ +L + ++ Sbjct: 187 SLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|330444333|ref|YP_004377319.1| ribonuclease Z [Chlamydophila pecorum E58] gi|328807443|gb|AEB41616.1| Ribonuclease Z [Chlamydophila pecorum E58] Length = 317 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 86/294 (29%), Gaps = 79/294 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M ILGC +S PT +N+ R +N ++ D Sbjct: 12 MSSR-ELIILGC-SSQQ------------PTRTRNQ--------GAYLFRWNNEGLLFDP 49 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMK 116 G Q + + + + +H H DH G+ + L K P+ Y K Sbjct: 50 GEGTQRQFIFANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKISHPVHCYYPASGKK 109 Query: 117 HL-FESFRYCFKALDDRTYPPI--------VNPIVIENNDVPICMKSAGGVIEAI----- 162 + + + PI IE + + + G I Sbjct: 110 YFDRLRYGTIYHETIQVIEHPINEEGIVEDFGNFRIEARRLQHQVDTLGWRITEPDTIKF 169 Query: 163 ------------PILQQ---HGRISSLGFRFGNVAYCTDVN-------------AFP-AE 193 PI+Q+ HG + LG Y ++V+ P Sbjct: 170 LPEKLRARGLQGPIMQELIKHGSVHHLG----KTTYLSEVSYQRPGDSIAVIADTLPCQA 225 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 +++ +N ++ ++ H H + ++ + + +LTH Sbjct: 226 AIDLARNARLMLCESTYLEEHRHLAESHYHMTAKQAATLAKKAQAQQLVLTHFS 279 >gi|251780861|ref|ZP_04823781.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085176|gb|EES51066.1| beta-lactamase domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 237 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 67/208 (32%), Gaps = 46/208 (22%) Query: 56 VIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 ++++ G +F + L + + L TH H DH +D + K ID+Y + Sbjct: 23 LLLELGINFKNIKKALNYDLSKVVGALITHEHKDHCKCVDDVI------KAGIDIYMSKG 76 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + Y I + + G +P QH Sbjct: 77 TSEGIK--------------YKVSEEAIKNRVHYLKHAESYKIGGFLIVPFNAQHDVNEP 122 Query: 174 LGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------LKNGLHSS 216 LGF G + + TD +++D + I+ + S Sbjct: 123 LGFLIYHKYIGKIVFATDTYYL----KNTFRDIDHVFIECNYSEDVLQQLPPWRARTIKS 178 Query: 217 HFSLS---ESLKKIELINPKNAILTHMH 241 H SL E+L+ L K+ L H+ Sbjct: 179 HMSLETLKETLQTWNLEKTKDITLIHIS 206 >gi|262282439|ref|ZP_06060207.1| ribonuclease Z [Streptococcus sp. 2_1_36FAA] gi|262261730|gb|EEY80428.1| ribonuclease Z [Streptococcus sp. 2_1_36FAA] Length = 309 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ I++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDIEIYGPKGIKNFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + N + +++ H I + Sbjct: 103 MSSLR---------VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|90421214|ref|ZP_01229114.1| putative metal-dependent beta-lactamase [Aurantimonas manganoxydans SI85-9A1] gi|90334527|gb|EAS48312.1| putative metal-dependent beta-lactamase [Aurantimonas manganoxydans SI85-9A1] Length = 292 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 58/175 (33%), Gaps = 15/175 (8%) Query: 45 SRVSERGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V R + ++ D G ++ EQV ID +L TH H DHI G+ + K Sbjct: 30 SCVEVRCGDRVLVFDAGTGIVGCGRKLYEEQVGEID-ILLTHCHFDHIIGLPFVIPL-YK 87 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 + ++A F P I+ D P + G I Sbjct: 88 DHAAVRIHAGHFLDDTTCRDMVERFMRPPYFPVTPKQFAAHIDYRDFRPPAVLDLGDGIV 147 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIID 207 + H ++G+R ++ Y TD P + + +I D Sbjct: 148 VRTVRLNHPN-GAVGYRVDFEGRSICYITDTEHEPGTRDEAVAAFVAGAEVMIYD 201 >gi|24213920|ref|NP_711401.1| metal-dependent hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|45658320|ref|YP_002406.1| hypothetical protein LIC12478 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24194772|gb|AAN48419.1| metal-dependent hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|45601562|gb|AAS71043.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 318 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 89/248 (35%), Gaps = 37/248 (14%) Query: 52 SNTTVIVDTGPDFY---MQVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFLKQKRP 105 S ++ D G +++R++ + + + ++H H DHI GI + ++ Sbjct: 71 SGKRLVFDCGTGLRILGDELMRKEFQNGEGKLSLFFSHTHWDHIQGIPFFKPIYIP-GNE 129 Query: 106 IDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIP 163 Y+ PD + L + F + + + + + + G + P Sbjct: 130 FHFYSPFPDLQERLEKQH---FPEYFPIPFSGLASTKIFTCLNPGETLDLEGDCRVSFYP 186 Query: 164 ILQQHG----RISSLG--FRFGNVAYCT--DVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 + G R+ G F F A T D ++ +N D L++DA + L Sbjct: 187 LKHPGGSYAYRVEEKGKVFIFATDAEFTGEDFDSISE-MKPFFENADLLVLDA-QYTLDE 244 Query: 216 S-------HFSLSESLKKIELINPKNAILTHMHVDLDY-----DMVLKSTPSR-VVPAFD 262 S H S + ++ N K +LTH + Y D++L+ + V Sbjct: 245 SFQKFDWGHTSYTMAVNCAVAWNVKTLVLTH--HEPVYSDDVLDLILEEARAHSVSLGNS 302 Query: 263 GMQFSSPI 270 M+ + Sbjct: 303 SMKIELAV 310 >gi|89099012|ref|ZP_01171891.1| ribonuclease Z [Bacillus sp. NRRL B-14911] gi|89086142|gb|EAR65264.1| ribonuclease Z [Bacillus sp. NRRL B-14911] Length = 308 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P R +S+ + + ERG T + D G Sbjct: 1 MDLLFLGTGA--GIPA--------------KLRNVTSMALKLLEERG--TVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI+G+ GL Q ++VY ++ Sbjct: 43 QHQILHTSLKPRRIEKIFITHMHGDHIYGLPGLLSSRSFQGGETEVEVYGPKGLKDYIEI 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + YP +IE + I + L HG I SLG+R Sbjct: 103 SLS---VSGTCLKYP----LKIIEAIEGVIFEDE---DFKVEAKLLDHG-IPSLGYRI 149 >gi|327461200|gb|EGF07533.1| ribonuclease Z [Streptococcus sanguinis SK1057] Length = 309 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 79/296 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRT------------YPPIVNPIV-----------IENN 146 + L Y F D+ + Y ++ + +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKIMETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQN---- 200 +++AG + ++G+ L G + Y + P +++ L + Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPR--PGKTIAILGDTRKT 220 Query: 201 ---------LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A K + H + ++ + + K +L H+ Sbjct: 221 SVSVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|169830171|ref|YP_001700329.1| YycJ [Lysinibacillus sphaericus C3-41] gi|168994659|gb|ACA42199.1| YycJ [Lysinibacillus sphaericus C3-41] Length = 262 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 71/241 (29%), Gaps = 54/241 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + IVD G Q+ + V + + TH H+DHI GI Sbjct: 14 SIYVE-----NDDYAFIVDAGLSGKKMEQLFTKIDRNVKQLSGIFVTHEHSDHIKGIG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K + +YA + + I V + + + Sbjct: 67 ---VLARKYSVPIYANAKTWQAIDGL---------------IGEVPVEQRFEFDMDTVKH 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------ 205 G + H + + F + TD ++ D + Sbjct: 109 FGSLAVESFAVSHDAADPMFYTFHEDNRKLVIITDTGYVSDRMKGIIRGADSFVFESNHD 168 Query: 206 IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLK 251 ++ L+ G + H S ++ + + N L+H+ D + + + Sbjct: 169 VNMLQMGRYPWSIKRRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKDNNMKELAR 228 Query: 252 S 252 Sbjct: 229 M 229 >gi|160933807|ref|ZP_02081195.1| hypothetical protein CLOLEP_02668 [Clostridium leptum DSM 753] gi|156867684|gb|EDO61056.1| hypothetical protein CLOLEP_02668 [Clostridium leptum DSM 753] Length = 264 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 33/163 (20%) Query: 56 VIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++VD G Q+ + S+ A+ TH H DH+ G+ L + I VY Sbjct: 25 ILVDAG-RTAKQMEGALSANDINISSVRAIFVTHEHTDHVKGLR-----VLASRHHIKVY 78 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 ++ ++ L + I++ + ++ AG I P H Sbjct: 79 SSMGTLEALNDM--------------QILSGKFPCDVISENGIQEAGMEIR--PFHTSHD 122 Query: 170 RISSLGFRF----GNVAYC-TDVNAFPAESLEKLQNLDFLIID 207 S+G+R G V TD+ E L D +++ Sbjct: 123 SAESVGYRISLPNGRVVVVATDLGFVSEEVRSALAGCDVAVME 165 >gi|116328750|ref|YP_798470.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331661|ref|YP_801379.1| metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121494|gb|ABJ79537.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125350|gb|ABJ76621.1| Metal-dependent hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 318 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 79/211 (37%), Gaps = 29/211 (13%) Query: 52 SNTTVIVDTGPDFY---MQVLREQVLSID---AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +I D G +++R++ + + A+ ++H H DHI GI + ++ Sbjct: 71 NGRRMIFDCGTGLRVLGDELMRKEFQNGEGKIALFFSHTHWDHIQGIPFFKPIYIP-GNE 129 Query: 106 IDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIP 163 + Y+ PD + L F + + + + + + + G + P Sbjct: 130 LHFYSPYPDLQERLERQQSPEFFPIP---FSALASTKLFTCLSLGETLDLEGDCKVSFYP 186 Query: 164 ILQQHG----RISSLG--FRFGNVAYCT--DVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 + G R+ G F F A T D ++ +N D L++DA + L Sbjct: 187 LKHPGGSFAYRVEENGKVFIFATDAEFTGEDFDSVTE-MKPFFENADLLVLDA-QYTLDE 244 Query: 216 S-------HFSLSESLKKIELINPKNAILTH 239 S H S + ++ N K +LTH Sbjct: 245 SFQKFDWGHTSYTMAVNCAVAWNVKKLVLTH 275 >gi|6689354|emb|CAB65453.1| VicX protein [Streptococcus pyogenes] Length = 270 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 26 PKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA L + K + + G ++ Sbjct: 81 DIYANEKTW-QLMDECNMLGKLDASQK------------HIFQRDKVLTFGDVDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H I +R + TD ++N D +LI I+ L++G + Sbjct: 128 SHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENADGYLIESNHDIEILRSGSYPW 187 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + N K L H+ +L + ++ Sbjct: 188 SLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVNQL 243 >gi|326316168|ref|YP_004233840.1| beta-lactamase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373004|gb|ADX45273.1| beta-lactamase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 258 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 61/212 (28%), Gaps = 56/212 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G+S + G G ++VD G Sbjct: 2 LRFKNLGSGSSGNATIVEGRCGT------------------------QVRRLLVDCGLGP 37 Query: 65 YMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 R + IDA+ TH H+DH+ G+ + + I + + + + Sbjct: 38 RQLAGRLGEAGLAIDDIDAIFITHEHSDHVGGLQKIA-----LRHRIPAWMSHGTHEAI- 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 P ++ ++ D G EA P H L R Sbjct: 92 --------------GAPDLDGLLHLTAD---GESIDLGAFEARPFTVPHDAREPLHLRCS 134 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIID 207 + + TD+ L L+ L+++ Sbjct: 135 DGATHIGLLTDLGHATEHVLAHLRGCHALLLE 166 >gi|183220712|ref|YP_001838708.1| beta-lactamase family hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910813|ref|YP_001962368.1| metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775489|gb|ABZ93790.1| Metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779134|gb|ABZ97432.1| Putative metal-dependent hydrolase of the beta-lactamase superfamily I [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 318 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 79/260 (30%), Gaps = 51/260 (19%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFL--K 101 +I+D G Q++ + TH H DHI GI FL Sbjct: 69 DKEGNLIIIDGGTGLRELGNQIMATDFGKGAGHAYWILTHTHWDHIQGIPFFIPLFLPGN 128 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I + + K L F + + Y IE +V S G I+A Sbjct: 129 HFEFISSMSDAE--KRLEHQFVFTHFPVSFDHYAAKKTFQFIEEGEV----VSLGPHIQA 182 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAES------LEKLQNLDFLIIDALKN 211 +H S +RF ++ + +D E ++ ++ D L+ D + Sbjct: 183 FSKAVRHPG-GSFSYRFTEEGKSIIFASDAEFNLEEMENIDTYIDYFRDADVLVFDT-QY 240 Query: 212 GLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST----------- 253 S H S S + K ++ H D YD Sbjct: 241 TFEESLQKIDWGHSSASIATDIALRAKVKKLVM--FHHDPSYDDEKLDLVYLRALKYKEM 298 Query: 254 --PSR---VVPAFDGMQFSS 268 P ++ A++G++ Sbjct: 299 FDPHGKLEIIMAYEGLEIEV 318 >gi|313887625|ref|ZP_07821307.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846234|gb|EFR33613.1| metallo-beta-lactamase domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 261 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 77/219 (35%), Gaps = 48/219 (21%) Query: 53 NTTVIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT +I+D G + + V IDAV TH H DHI G+ L ++ + Sbjct: 21 NTKIIIDAGLSGKKIEENLKKIGVNPSDIDAVFVTHEHIDHIKGVG-----VLSRRHNLK 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V++ + + + K LD + N + EN ++ +PI Sbjct: 76 VFSNMMTLDAMLPT----VKKLDPK------NTFIFENGKA-----FTFKDLDIMPISTF 120 Query: 168 HGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQN-----------LDFLIIDA----- 208 H S GF ++ TD E++EK+ +D LI Sbjct: 121 HDCASGCGFVIKGDKKLSLLTDTGWVNQEAMEKMDGSNLIYLESNHDVDMLINGTYPYPT 180 Query: 209 ----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 L H S+ + E L I + IL H+ D Sbjct: 181 KQRILSTKGHLSNENAGEVLAMILKKKQEQVILGHLSTD 219 >gi|190895375|ref|YP_001985667.1| hydrolase protein, beta-lactamase superfamily [Rhizobium etli CIAT 652] gi|190699320|gb|ACE93404.1| putative hydrolase protein, beta-lactamase superfamily [Rhizobium etli CIAT 652] Length = 276 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R N ++ D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGNHRMLFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + S IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLSPHEGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 H ++G+R ++A D+ P SLE +Q D ++ D Sbjct: 150 IKTFTLNHPG-GAIGYRIEWQGRSIALIYDIEHNPGSYDPVSLEMMQGADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKMAGAKRFALFH 241 >gi|251781985|ref|YP_002996287.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390614|dbj|BAH81073.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 269 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 25 PKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E LD + + G ++ Sbjct: 80 DVYANEKTWQLMDERN--MLGKLDAS-----------QKHIFQRDKMLTFGDVDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 SLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|86740948|ref|YP_481348.1| beta-lactamase-like protein [Frankia sp. CcI3] gi|86567810|gb|ABD11619.1| beta-lactamase-like [Frankia sp. CcI3] Length = 273 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 93/293 (31%), Gaps = 68/293 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC + G+P G SS + T +++D GP Sbjct: 1 MRLTVLGCRS--GMPT-GGQCS-------------SSYLVCTA-----ETKMLLDCGPGA 39 Query: 65 YMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGY----------------------FLK 101 + + +D ++ +H H+DH + L Sbjct: 40 ATALSALGHPAVLDGIVISHLHSDHCY---DLLPVGKALLASRTRYPMRFPTLPARDIPT 96 Query: 102 QKRPIDVYAAP---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + PI +Y D + L F L D+ + + + + K + Sbjct: 97 RSEPIPLYLPRGGLDTFRTLAGLFPVATIPLLDKAFEVAFDVREYDPGE---TFKIGDCL 153 Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA---LKN 211 + + + + G R ++AY D ++ + +D + +A L + Sbjct: 154 VSLHGLRHA---VPNCGIRIETADASLAYTGDT-GVTDALVDLARGVDLFLAEATLELTD 209 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHM-HVDLDYDMVLKSTPSRVVPAFDG 263 H S ++ + L +LTH D ++ ++ RV FDG Sbjct: 210 DSDHGHLSALDAAEAARLAGVGQLVLTHFVTDDPEWLAARRAEAERV---FDG 259 >gi|22537368|ref|NP_688219.1| ribonuclease Z [Streptococcus agalactiae 2603V/R] gi|77412852|ref|ZP_00789057.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|41017558|sp|Q8DZ99|RNZ_STRA5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|22534241|gb|AAN00092.1|AE014247_7 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|77161148|gb|EAO72254.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] Length = 309 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +N S + ++ + N + D G Sbjct: 1 MEIQFLGTGAGQ-------------PAKARN----VSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DH+ G+ G R + ++ +D+Y Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDIYGPVGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRT------------YPPIVNPIV-----------IENN 146 M L Y F D+ + Y ++ + +E Sbjct: 103 MTALRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGYRVVQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCT------------DVNAFPA 192 +K AG + ++G +L G Y + D Sbjct: 163 LDAEALKLAGVPFGPLFGKVKNGENVTLEDGREIIAKDYISEPKKGKVITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ D L+ ++ + H + ++ + N K +L H+ Sbjct: 222 ASIRLALGADVLVHESTYGKGDERIAKSHGHSTNMQAADIAKQANAKRLLLNHVS 276 >gi|313889832|ref|ZP_07823474.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121877|gb|EFR44974.1| metallo-beta-lactamase domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 259 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 34/212 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR------G 97 S + +++D G ++ + L +DAV+ +H H DH+ + LR Sbjct: 21 SYLLTGHDGFQLLMDAGSRALNELEKVISPLELDAVIISHYHPDHVADLGVLRHYRQLYP 80 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +YA D + + P V + + G Sbjct: 81 KHLWEPKLLPIYA----------------HNEDQAEFAKLSLPDVSVGVAYDVEGSQSIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H I FR + D F + + D + D Sbjct: 125 PFDIAFIKTVHPVI-CYAFRIVERQTGQVFVFTADTGYFDDLA-TFAADADLFLADVYLY 182 Query: 212 G---LHSSHFSLSESLKKIELINPKNAILTHM 240 H +H + E+ + + K +LTHM Sbjct: 183 EGNENHIAHLTTKEAGQIAQQAKVKKLVLTHM 214 >gi|188992760|ref|YP_001904770.1| ribonuclease Z [Xanthomonas campestris pv. campestris str. B100] gi|167734520|emb|CAP52730.1| ribonuclease Z [Xanthomonas campestris pv. campestris] Length = 250 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 ERG + +D G + AV TH H DH+ G++ L YF +++ Sbjct: 26 ERGGAPWLTIDCGSEGLTSYQAHYAQMPQAVFITHVHLDHVGGLERLFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRLA---DYPNVLAEGGANFWDAFQLVPVGEAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLQGALVWTGDTRPIPEMLARYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|167463465|ref|ZP_02328554.1| ribonuclease Z [Paenibacillus larvae subsp. larvae BRL-230010] Length = 302 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 57/259 (22%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG 94 R +S+ ++ + ERG + + D G Q+L+ + +D + TH H DH++G+ G Sbjct: 1 RNVTSIVLNLLPERG--SYWLFDCGEGTQHQILKSPIRLGKVDKIFITHLHGDHLYGLPG 58 Query: 95 LRGYFLKQKR--PIDVYAAPDCMKHLFE---------SFRYCFKALDDRTYPPIVNPIVI 143 + Q P+ +Y + + +++ ++ + + Sbjct: 59 VLTSRCYQGGEDPLVLYGPKGIGAFVRQVLDISGAQLTYKLRVVEIEHEGNLYEDDRFSV 118 Query: 144 ENNDVPICMKSAGGVI--EAIPILQQHGRISSLGF----RFGN----------------- 180 E + ++S G I + +P H R+ +LG FG Sbjct: 119 EARRLNHRIESFGYRIVEKDLPGKLDHARLKALGVPAGPLFGRLKNGESITLENGQVIHG 178 Query: 181 ------------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSE 222 + D P +++ Q D L+ +A H + + Sbjct: 179 PDYVGEPVKGRIITILGDTQKTP-NAVKLAQGADLLVHEATFGAERQDLAGAYGHSTTID 237 Query: 223 SLKKIELINPKNAILTHMH 241 + + E +LTH+ Sbjct: 238 AARTAEEAGVGTLVLTHIS 256 >gi|297539541|ref|YP_003675310.1| beta-lactamase domain-containing protein [Methylotenera sp. 301] gi|297258888|gb|ADI30733.1| beta-lactamase domain protein [Methylotenera sp. 301] Length = 259 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T +++D G + R Q + ++ TH H DH G + K I Sbjct: 20 NQTRLMLDCGFSIKETLARLARLSLQPDDLAGIVITHEHDDHAGG-----AFKFAAKYKI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ +K Y PI ++ N V + + G I P Sbjct: 75 PVWLTYGTLKM-------------SSRYIPI--QHDLQLNVVDSHSEFSVGDIHVQPYPV 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + F + + TDV +E+L L+++ Sbjct: 120 PHDAREPMQCVFSDGNHKLGVLTDVGRTTPHIVERLSGCRALVLEC 165 >gi|288906284|ref|YP_003431506.1| metal-dependent hydrolase [Streptococcus gallolyticus UCN34] gi|325979297|ref|YP_004289013.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733010|emb|CBI14591.1| putative metal-dependent hydrolase [Streptococcus gallolyticus UCN34] gi|325179225|emb|CBZ49269.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 258 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 34/211 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTSEDGFQLLMDCGSRAVTELEKEISPLGLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y D++ + + V + + G Sbjct: 81 KHLWEPKILPIYG----------------HTEDEQEFAKLTLDGVSQGKAYDVNGVEKIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + D + D Sbjct: 125 PFDITFIKTVH-PVPCYAFRIVERATGQTLVFTGDTGYFEGLD-KFAAGADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTH 239 H +H + E+ + + + +LTH Sbjct: 183 AGNENHPAHLTTKEAGQIAKAAGVTSLVLTH 213 >gi|168237331|ref|ZP_02662389.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197289657|gb|EDY29020.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 305 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 81/327 (24%), Gaps = 97/327 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAFP------------------- 191 G D Sbjct: 153 HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGD 212 Query: 192 ----AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMH 241 +L Q +D ++ +DA ++ H S ++ + I+TH+ Sbjct: 213 TAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREADVGRLIMTHIS 272 Query: 242 VDLDYDMVLKSTPS------RVVPAFD 262 D + A+D Sbjct: 273 SRYDDKGCQRLLAECRAIFPATELAYD 299 >gi|257069149|ref|YP_003155404.1| metal-dependent hydrolase, beta-lactamase superfamily III [Brachybacterium faecium DSM 4810] gi|256559967|gb|ACU85814.1| metal-dependent hydrolase, beta-lactamase superfamily III [Brachybacterium faecium DSM 4810] Length = 265 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 71/215 (33%), Gaps = 22/215 (10%) Query: 40 SSLKISRVSERGSNTTVIVDTGPD-FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS I G V++D G F +DAV+ +H H DH + GL + Sbjct: 20 SSYLIEHEDADGRLWRVLLDLGSGAFGPLQSVIDPADLDAVIISHLHPDHFLDVTGLEVF 79 Query: 99 FLKQKRP----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + R + V+A + + + D T P E++ + + Sbjct: 80 WAYHSRDDLGLLPVHAPAPLPERIAAVLGREGRVPDGVTCAP------FEHHVLTDHQRF 133 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 G ++ H + + GFR Y D +A E ++ D + +A Sbjct: 134 TIGPLQIETRAVLH-PVEAYGFRITAGDATFVYSGDTDAC-EALDELARDADLFLCEAGY 191 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + H + + + + LTH+ Sbjct: 192 IEGRDDRFTGVHLTGRRAGQCATRAGVRQLALTHI 226 >gi|194433318|ref|ZP_03065598.1| ribonuclease Z [Shigella dysenteriae 1012] gi|194418412|gb|EDX34501.1| ribonuclease Z [Shigella dysenteriae 1012] gi|320178758|gb|EFW53721.1| Ribonuclease Z [Shigella boydii ATCC 9905] Length = 311 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 85/299 (28%), Gaps = 81/299 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 107 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 164 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPA 192 +N ++ VP AG I Q +G G +A D Sbjct: 165 LNAQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDT-GPSD 223 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 +L+ + +D ++ +A H S ++ I+TH+ D Sbjct: 224 AALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD 282 >gi|123966743|ref|YP_001011824.1| metallo-beta-lactamase superfamily protein [Prochlorococcus marinus str. MIT 9515] gi|166991498|sp|A2BY56|RNZ_PROM5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123201109|gb|ABM72717.1| Metallo-beta-lactamase superfamily enzyme [Prochlorococcus marinus str. MIT 9515] Length = 312 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 45/211 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S GVP +T R SSL + + + D G Sbjct: 1 MNVTFLGT--SSGVPTLT--------------RNVSSLALKL---SQTAEVWLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPD----CMK 116 Q+++ + I + TH H DHI+G+ GL I++Y + + Sbjct: 42 QHQLMKSNIKSSQIKKIFITHMHGDHIYGLPGLLATLGLSGNSNGIELYGPSELKFFVLS 101 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L YC ++P + +E+ + ++ +H R+ + G+ Sbjct: 102 ALKS--SYC-----KLSFP--LRFKEVEDKASFNKILFENDKLKVHCACLKH-RLPAYGY 151 Query: 177 R--------FGNVAYCTDVNAFPAESLEKLQ 199 R ++ TD+N P +LQ Sbjct: 152 RVSEKDKPGIFDIKKATDLNIPPGPIYSELQ 182 >gi|218663591|ref|ZP_03519521.1| putative hydrolase protein, beta-lactamase superfamily [Rhizobium etli IE4771] Length = 276 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R ++ D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGKHRMLFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + + IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLTPHQGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 H ++G+R ++A D+ P SLE +Q D ++ D Sbjct: 150 IKTFTLNHPG-GAIGYRIEWQGRSIALIYDIEHNPGSYDPVSLEMMQGADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKMAGAKRFALFH 241 >gi|52082609|ref|YP_081400.1| hypothetical protein BL02375 [Bacillus licheniformis ATCC 14580] gi|52788007|ref|YP_093836.1| YycJ [Bacillus licheniformis ATCC 14580] gi|52005820|gb|AAU25762.1| conserved hypothetical protein YycJ [Bacillus licheniformis ATCC 14580] gi|52350509|gb|AAU43143.1| YycJ [Bacillus licheniformis ATCC 14580] Length = 264 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ L +K Sbjct: 22 DDHAFLVDAGLSGKAMEGLMAQIDR-KLDQLDGIFVTHEHSDHIKGLG-----VLARKYE 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA K + + K + + + P+ + G ++ Sbjct: 76 LPVYANEKTWKAME---GHIGKMDNGQKFV------------FPMETVKSFGSLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WNIKRRILSDVGHVSNEDAALAMTDVIGNETSRIYLAHLSQDNNMKELARM 231 >gi|54023061|ref|YP_117303.1| hypothetical protein nfa10940 [Nocardia farcinica IFM 10152] gi|54014569|dbj|BAD55939.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 284 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 71/247 (28%), Gaps = 36/247 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S+ P D A + T V++D GP Sbjct: 31 MRLTVLGCSGSVSGP----DSPASG----------------YLLTGPDMTPVVIDFGPGV 70 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + R +D + TH HADH + GL ++ P + +S Sbjct: 71 LGALQRYADPGEVD-IFLTHLHADHCLDLPGL--LVWRRYHPTPPVGRAIV-RGPSDSAL 126 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 A + VI+ G I + S G R Sbjct: 127 RIGNASAEVGGECDDWSDVIDLRPWQEGETVEFGPGHTIAARRMFHPPESYGLRITTNAG 186 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLIIDALK-----NGLHSSHFSLSESLKKIELINPK 233 Y D A E Q D L+ +A N H S +E+ + Sbjct: 187 RTFVYTGDT-AMCDAVQELAQGADVLMAEASWTHDPANRPPGIHLSGTEAGRIAARAGVG 245 Query: 234 NAILTHM 240 +LTH+ Sbjct: 246 ELLLTHI 252 >gi|330808080|ref|YP_004352542.1| putative hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376188|gb|AEA67538.1| putative hydrolase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 252 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 80/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T V+VD G ++LR V + A+L TH HADH+HG+ L ++ + Sbjct: 20 AGTYVLVDCGFSLRETEKRLLRLGVHPAQLSAILVTHEHADHVHGVGLLS-----RRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ L + PI + + + G ++ + Sbjct: 75 PVYLSRGTLEGLRK---------------PIEPAGFVAGGE-----QLRIGCLDISVVSV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H + F + TD+ ++ ++ ++LD L+I D L G + Sbjct: 115 AHDAREPTQYVFSDGERRFGLLTDLGSYCDRVMDSYRDLDALMIESNHCRDMLARGYYPY 174 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGGEHGHLNNHQAAFLVAELGWQGLQHLVLAHLS 213 >gi|301058550|ref|ZP_07199555.1| metallo-beta-lactamase family protein [delta proteobacterium NaphS2] gi|300447282|gb|EFK11042.1| metallo-beta-lactamase family protein [delta proteobacterium NaphS2] Length = 281 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 72/216 (33%), Gaps = 36/216 (16%) Query: 51 GSNTTVIVDTGPDFYM--QVLREQVLSID-AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 TV++D G L + ++D +L TH H DHI G F R I Sbjct: 34 DCGETVVIDAGSGLRPLGDHLMAKGKNVDIHLLMTHVHWDHIQGFPFFDPVFKPTTRII- 92 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVN--PIVIENNDVPICMKSAGGVIEAIPIL 165 V AP C+K L F + D +P I + D + Sbjct: 93 VDGAPRCIKGLRAIFD---SGIGDGFFPIRFEDLGADIRHLDRLPYGPLVIQNTTITTVP 149 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESL---------EKLQNLDFLI------- 205 H + GFRF + + TD N + Q+ D L+ Sbjct: 150 LHHPQ-DGFGFRFEEDGKSFVFITD-NELTRKVWQGKCVDDFVPFCQDADILVHDAQFLP 207 Query: 206 --IDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 I+A + HS H + +L+ K+ +L H Sbjct: 208 EEIEAHRGWGHSDHST---ALELALKAGVKHLLLFH 240 >gi|257885428|ref|ZP_05665081.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257821284|gb|EEV48414.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] Length = 269 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 81/247 (32%), Gaps = 56/247 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 SL I ++VD G Q+ R +D +L TH H DHIHG+ Sbjct: 21 SLYIE-----SEKKRLLVDAGLSGKKITSLMAQIDRTP-DQLDGILVTHEHRDHIHGVG- 73 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K +DV+A + + P I N V + + + Sbjct: 74 ----VLARKYHLDVFANQQTWEAME---------------PLIGNIPVEQKHLFEMGKVR 114 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI---- 205 G I+ H + +RF TD ++N D +L+ Sbjct: 115 TFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGYCSDYMRGVIENADGYLMESNH 174 Query: 206 -IDALKNGLHS-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVL 250 ++ L+ G + H S + +L ++I K L H+ + + + Sbjct: 175 DLEMLRMGPYPWNLKQRILGDRGHLSNEDGALVMTDVIGNRTKRIYLGHLSKENNMKELA 234 Query: 251 KSTPSRV 257 T V Sbjct: 235 HLTMENV 241 >gi|256076516|ref|XP_002574557.1| zinc phosphodiesterase [Schistosoma mansoni] gi|238659766|emb|CAZ30790.1| zinc phosphodiesterase, putative [Schistosoma mansoni] Length = 750 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 94/326 (28%), Gaps = 87/326 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG +S P R S + + + + +++D G Sbjct: 378 EITFLGTASSS----------------PNKYRNISCILM----QLDPDNYIMLDCGEGSL 417 Query: 66 MQVLREQ--------VLSIDAVLYTHPHADHIHGIDG--------LRGYFLKQKRPIDVY 109 Q+ + + +L TH HADH G+ L+ + Q + Sbjct: 418 SQLYALHGVEKGNDILRKLRLILVTHMHADHHGGVFTVALVRSNLLKSDGIDQSNCLLPV 477 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND----------------VPICMK 153 P H +F F D+ P + PI+ + +D Sbjct: 478 LTPSEFCHWLTNFNKLFHY--DQIVDPFIIPIIYDKHDKNSNPSWVLNMKRNETENWLKL 535 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN-------------------------VAYCTDVN 188 I P+ H R SS F N + Y D Sbjct: 536 LEQLDINIRPVKVPHTR-SSWAFIIDNPYPFKNLVNSKNIAENCSEIQRKWSIVYSGDTP 594 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHV 242 + P +N D LI +A N + + H + S++++ +N +L H Sbjct: 595 SCPELVRAG-KNCDLLIHEATVNDEYVDLAVKAKHSTTSQAIQAGRDMNASFILLNHFSQ 653 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 + S V +FD M Sbjct: 654 RYGRVPPIDEFKSDVAASFDFMTVKF 679 >gi|220913059|ref|YP_002488368.1| hypothetical protein Achl_2314 [Arthrobacter chlorophenolicus A6] gi|219859937|gb|ACL40279.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6] Length = 265 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 63/226 (27%), Gaps = 52/226 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P +S + ++ V++D G Sbjct: 1 MKLTIVGCTGS--FPGPGS---------------PASCYLLTATDGERTWKVVMDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHL 118 + R + IDA+ TH H DH + GL + I V+ + Sbjct: 44 LGAIQRYTDLEDIDAIFLTHLHPDHCMDLCGLHVAVRWKPGGWDRGRIPVWGPAATADRM 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG 175 + Y ++P + E D G P H + Sbjct: 104 ATA------------YGLDLDPGMHEEFDFTNWSERRPVTVGPFTVTPYAVNHPVEEAYA 151 Query: 176 FRFG-------------NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 R + Y D ++ P E +N D + +A Sbjct: 152 LRVDVVEPDKDGNPVARTLTYSGDTDSCPGLE-EAAKNADLFLCEA 196 >gi|162447081|ref|YP_001620213.1| beta-lactamase family hydrolase [Acholeplasma laidlawii PG-8A] gi|161985188|gb|ABX80837.1| metal-dependent hydrolase, beta-lactamase family [Acholeplasma laidlawii PG-8A] Length = 256 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 24/137 (17%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E V +++ + TH H+DHI G+ G+ LK +VY + L Sbjct: 44 EDVSAVNTLFLTHEHSDHIFGLLGM----LKAGHLKEVYLTQGTLDSL------------ 87 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD 186 ++ VI D + + +PIL H +GFRF + TD Sbjct: 88 SSEVRQLLPKTVIIKADESFEFR----QFKVLPILLSHDAKEPVGFRFDWREKSFVCLTD 143 Query: 187 VNAFPAESLEKLQNLDF 203 E L++ D Sbjct: 144 TGYVDESYHEVLKDADL 160 >gi|319783986|ref|YP_004143462.1| coenzyme PQQ biosynthesis protein B [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169874|gb|ADV13412.1| coenzyme PQQ biosynthesis protein B [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 312 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 103/329 (31%), Gaps = 82/329 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPK----NRRTRSSLKISRVSERGSNTTVIVDT 60 H I+G A G P+ ++ + RT+SS+ S V+ + Sbjct: 1 MHLRIIGSAAGGGFPQWNCNYRLSRAARNGMASVHPRTQSSVAASADGLGW----VLFNA 56 Query: 61 GPDFYMQVL---------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 PD Q+ + S I AV+ T+ DHI G+ L++++P +Y Sbjct: 57 SPDIRQQIAATPELQPAGDAPLRSTPIRAVVLTNADVDHIAGL-----LSLRERQPFAIY 111 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + L + F LD P + P E + G +IE + G Sbjct: 112 ATAQVLATLEAN--SIFNVLDPALVPRRILPPAKELAICDAEGRDTGVMIEPFAVP---G 166 Query: 170 RI-------------------SSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFL 204 +I ++G R G+V Y A +L + L Sbjct: 167 KIALYLEDRDHPDANFSSDAGDTIGVRIAGIGSRGSVFYIPGCARIDARLRARLTDAACL 226 Query: 205 IIDAL--------------KNGLHSSHFSLSESLKKI---ELINPKNAILTHMHV----- 242 + D K G H ++S L I + + H++ Sbjct: 227 LFDGTVYTDDEMIVAGVGQKTGARMGHLAISGELGSIAGLANVKVGRRVFVHINNTNPIL 286 Query: 243 ---DLDYDMVLKSTPSRVVPAFDGMQFSS 268 ++ V + A DGM+ Sbjct: 287 DESSAEHAAVKA---AGWEIANDGMEMEF 312 >gi|237795713|ref|YP_002863265.1| hypothetical membrane spanning protein [Clostridium botulinum Ba4 str. 657] gi|229261262|gb|ACQ52295.1| hypothetical membrane spanning protein [Clostridium botulinum Ba4 str. 657] Length = 647 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 35/227 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D G + + + V +D V+ THPH DHI G+D + Sbjct: 339 SILIQQ-----DGHNMLIDAGTNASENTVVNYLKSKGVTKLDYVIGTHPHEDHIGGLDKV 393 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT----YPPIVNPIVIENNDVPIC 151 + I H ++F+ ++ ++ P + + + D I Sbjct: 394 ID-NFAVDKVI---MPKVT--HTTQTFKDVITSIQNKGLKITVPTVGDKYSLGVADFTIL 447 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDAL 209 + + +FGN A+ D + + + LD D L Sbjct: 448 APNNSSYSNLN------NYSIVIKLKFGNRAFIFTGDAESLSEGEI-LAKQLDI-TGDVL 499 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 K G H S S +++ + +NPK A+++ + + L Sbjct: 500 KLGHHGSKTSTTQA--FLNKVNPKYAVVSCGKNNSYKHPHQETLNKL 544 >gi|73662558|ref|YP_301339.1| hypothetical protein SSP1249 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642642|sp|Q49XV1|RNZ_STAS1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|72495073|dbj|BAE18394.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 306 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 38/201 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ I+ E SN + D G Sbjct: 1 MEITFFGT--SAGLPT-------------KERNTQA---IALNLEPYSNNIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + +D + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEGKPLTLIGPKGIKAYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + R + YP + I IEN+ + + HG I S G+R Sbjct: 103 TTLR---LSESKLNYP--ITYIEIENH-----LSYQNNGFNVEAHMLNHG-IPSFGYRIE 151 Query: 180 NVAYCT---DVNAFPAESLEK 197 Y + DV+A LE Sbjct: 152 AP-YTSGKIDVSALKEIGLEP 171 >gi|84494377|ref|ZP_00993496.1| hypothetical protein JNB_06264 [Janibacter sp. HTCC2649] gi|84383870|gb|EAP99750.1| hypothetical protein JNB_06264 [Janibacter sp. HTCC2649] Length = 255 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 78/241 (32%), Gaps = 38/241 (15%) Query: 18 VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSI 76 V I P + +S + V + V+ D G + R + + Sbjct: 3 VTVIGCSGSFAGPNSA------ASSYLVSVDDGERTWNVLFDLGNGALGPLQRHVDLRDL 56 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQK--------RPIDVYAAPDCMKHLFESFRYCFKA 128 DAV +H H DH + G ++ + V+ + + + Sbjct: 57 DAVFISHLHPDHCA---DICGLYVAHHYAPAGAPADRLPVWGPSETAARVALMYHGLEDG 113 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYC 184 D+ V + + + + G + P H + + GFR ++Y Sbjct: 114 GMDK---------VFDFGRLSDSVAVSIGPVTITPYAVNH-PVEAFGFRVEADGVVLSYT 163 Query: 185 TDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELI-NPKNAILTH 239 D ++ + + D ++ D+ ++ + H + S + + K +LTH Sbjct: 164 GDTDSCDNLT-PLMTGADLVLADSAFVDGRDEVRGVHLTASRAAQAAVAAGGVKRLVLTH 222 Query: 240 M 240 + Sbjct: 223 L 223 >gi|295094862|emb|CBK83953.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Coprococcus sp. ART55/1] Length = 265 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 47/231 (20%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S+T ++VD G + E + +D VL TH H DH+ GI L +K + Sbjct: 20 SDTHLLVDVGISCKRVENALKDEGIKPSELDGVLVTHEHIDHVKGIG-----VLARKHGV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + ++D+ + +++ K I P Sbjct: 75 PIYATAGTIAEMKKMTS--LGSIDEGLF-----------HEIRPDEKILIKDITVDPSSI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + V+ TD+ + ++KL N D ++++A L+ G + Sbjct: 122 WHDAADPVCYSLYGDGKKVSIATDMGNYNDYIVDKLDNSDIMVVEANHDVRMLEAGPYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S S + I + + K +L H+ + +++ + T Sbjct: 182 YLKRRILGNYGHLSNELSGQLIYRLLNDHVKGILLGHLSKENNFEELAYET 232 >gi|320333058|ref|YP_004169769.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319754347|gb|ADV66104.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 348 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFL 100 + +T +++D G D +V +L ID +L++H H DH+ G D R F Sbjct: 15 ALLITADSGQQHTRLLLDCGADVLREVPLADILRIDHLLFSHLHMDHVCGFDAFFRANFG 74 Query: 101 KQKRPIDVYAAPDCMKHLFESF 122 + R V+ P + + F Sbjct: 75 RVDRENHVWGPPGTIAAIHHRF 96 >gi|306814617|ref|ZP_07448779.1| ribonuclease Z [Escherichia coli NC101] gi|305852011|gb|EFM52463.1| ribonuclease Z [Escherichia coli NC101] Length = 305 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 83/296 (28%), Gaps = 75/296 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEIFDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAESL 195 ++ VP AG I Q +G G +A D A L Sbjct: 162 QALKAAGVPPGPLFQALKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAA-L 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 E + +D ++ +A H S ++ I+TH+ D Sbjct: 221 ELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITHVSSRYD 276 >gi|296114293|ref|ZP_06832947.1| pyrroloquinoline quinone biosynthesis protein PqqB [Gluconacetobacter hansenii ATCC 23769] gi|295979054|gb|EFG85778.1| pyrroloquinoline quinone biosynthesis protein PqqB [Gluconacetobacter hansenii ATCC 23769] Length = 307 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 104/314 (33%), Gaps = 62/314 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C + RT++S+ IS I++ P Sbjct: 4 IIVLGAAAGGGFPQWNSNADGCRRARSGDPAALPRTQASIAISGDGVHW----FIINASP 59 Query: 63 DFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ RE + S I V+ T D I G+ L++++P+ + A Sbjct: 60 DLRTQISQTPALHPREGLRSTPIAGVILTGGEVDTIAGL-----LTLRERQPLTLLATDM 114 Query: 114 CMKHLFES--FRYCFKALDDRTYPPI---VNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 ++ L + F + + RT P+ V +++ + +++ + P+ + Sbjct: 115 VLETLDANPVFEALNRQVVTRTQLPLEQDVALHLVDGAPAGLTIRAFVVPGKV-PLYAER 173 Query: 169 GRISS----LGFRFG--------NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------- 208 G + G G V + +L D + D Sbjct: 174 GPNPAAIVENGETIGLEITDGKRRVCFIPGCARMTDALRRRLSGADLVFFDGTLWVDDEM 233 Query: 209 LKNGLHSS------HFSL---SESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTP 254 L+ G+ H SL + + + +L H++ D ++ Sbjct: 234 LRAGIGEKTGQRMGHMSLMGEGGTFEAFRDLEIGRKVLIHINNSNPVLLSDSAERQQANA 293 Query: 255 SRVVPAFDGMQFSS 268 A DGM+ + Sbjct: 294 QGWDVAHDGMRITL 307 >gi|221214744|ref|ZP_03587713.1| beta-lactamase domain protein [Burkholderia multivorans CGD1] gi|221165283|gb|EED97760.1| beta-lactamase domain protein [Burkholderia multivorans CGD1] Length = 258 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + + T V++D G + + L V +DA+L TH H+DH+ Sbjct: 14 ALVVEATSGTTTTRVLLDCGFSAKEVERRLGRLNLCVDDLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + ++ + +A Sbjct: 69 ALTLARRASLPLYMSWGTARA------------------AGADEADVDLRVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|118444705|ref|YP_878433.1| ribonuclease Z [Clostridium novyi NT] gi|166991098|sp|A0Q1D1|RNZ_CLONN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|118135161|gb|ABK62205.1| metallo-beta-lactamase family protein, putative [Clostridium novyi NT] Length = 311 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 85/307 (27%), Gaps = 101/307 (32%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G + P RR+ SSL ++ + ++VD G + + Sbjct: 6 FLGTGGGMPTP----------------RRSLSSLLLNFKGCK-----ILVDCGEGTQLSM 44 Query: 69 LRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 ID + TH H DHI G G+ R P+ + D + + Sbjct: 45 KNAKTGFKDIDIICITHCHGDHIIGFPGILSTIGNSGRTNPLTIIGPKDITRIVK----- 99 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMK--------SAGGVIEAIPILQQHGRISSLGF 176 Y P +IEN + +GG + + H I + + Sbjct: 100 --GLTVITPYLPY-ELNIIENPMQKLSFNVTKENLKLESGGELLIDTLELNHS-IPCIAY 155 Query: 177 RFG---------------------------------------------------NVAYCT 185 F +++ T Sbjct: 156 NFTVKRKPKFNREKAVNYNIPRKFWGDLQVGKNINYEGRVYTPSMVLGKERKGIKISFVT 215 Query: 186 DVNAFPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 D + ++ D I D + + + H + S++ N K ILT Sbjct: 216 DTTPI-DSIISFIEESDMFICEGTYGTDDDIDKAIKNKHMTFSQAATLAFRGNVKELILT 274 Query: 239 HMHVDLD 245 H V ++ Sbjct: 275 HFGVTME 281 >gi|325524401|gb|EGD02483.1| beta-lactamase domain-containing protein [Burkholderia sp. TJI49] Length = 258 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + + T V++D G + + L + +DA+L TH H+DH+ Sbjct: 14 ALVVEATSGTTTTRVLLDCGFSAKEVERRLGRLNLCIGDLDAILITHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + + ++ + + +A Sbjct: 69 ALTLARRASLPLYMSWGTARAV------------------GADDAEVDLHVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITTVLSGCDALVLE 165 >gi|313205576|ref|YP_004044753.1| rnase z [Riemerella anatipestifer DSM 15868] gi|312444892|gb|ADQ81247.1| RNAse Z [Riemerella anatipestifer DSM 15868] gi|315022694|gb|EFT35719.1| ribonuclease Z [Riemerella anatipestifer RA-YM] gi|325334994|gb|ADZ11268.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Riemerella anatipestifer RA-GD] Length = 304 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 17/143 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRG 97 +S + ++D G +Q+ R + I+ + +H H DH G+ GL Sbjct: 22 TSQLLEVQ-----ERYFLIDCGEGAQVQLRRAKAKFSKINHIFISHLHGDHCFGLPGLIA 76 Query: 98 YFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F R P+ +Y K + E F+ + + ++ + N V I Sbjct: 77 SFRLLGRETPLHIYGP----KGIQEMLETIFRITETQRGFEVIYHELEGNQSVKIYED-- 130 Query: 156 GGVIEAIPILQQHGRISSLGFRF 178 +E I H RI G+ F Sbjct: 131 -HKVEVFTIPLNH-RIYCNGYLF 151 >gi|311107360|ref|YP_003980213.1| metallo-beta-lactamase [Achromobacter xylosoxidans A8] gi|310762049|gb|ADP17498.1| metallo-beta-lactamase superfamily protein 8 [Achromobacter xylosoxidans A8] Length = 297 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 80/270 (29%), Gaps = 57/270 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA+L P R +S++ ++ +T + D G Sbjct: 1 MKITMLGTGAAL----------------PDPDRGQSAILLTL----DDDTHYLFDCGEGA 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL------KQKRPIDVYAAPDCM- 115 Q++R V + V TH H DHI + + K P+ V Sbjct: 41 TRQMVRANVDPAKVGFVFLTHLHHDHIC---DYPYFVISSWMLNKTGAPL-VLGPKGTRH 96 Query: 116 --KHLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-- 168 HLFE+ Y YP + + E +V G + +H Sbjct: 97 FVDHLFENGAYHTDYQARSAYPVRQANLEAMRPEVREVSPGPVFDDGRVRISVDWVEHIP 156 Query: 169 -GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH------ 217 G R +A+ D + Q+ D LI + +H Sbjct: 157 RDVCECFGVRVEAEGKVIAFSGDTAPC-EAMVRLAQDADLLIHECTFPESFIAHRAKTGV 215 Query: 218 ----FSLSESLKKIE-LINPKNAILTHMHV 242 + L I K+ + TH Sbjct: 216 GTYAHTSPTDLGIIASRAGVKSLVATHFGH 245 >gi|269792420|ref|YP_003317324.1| beta-lactamase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100055|gb|ACZ19042.1| beta-lactamase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 277 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 32/236 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-- 103 R ++D GP Q+ R +D V+ +H H DH + + + Sbjct: 26 RYGGFAGVLDPGPGSLHQICRAVPELDPTELDGVIISHRHLDHCGDANAVVEAMVGGGFN 85 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++ D + F Y + + R ++ + P+ G Sbjct: 86 ERGSIFLPKDALSDEPVVFGYLRRKVGRR-------VLLEDGGSYPL-----GEGQTLRA 133 Query: 164 ILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--KNGLHSS 216 + +H +++ GF +V +D + P + ++ ++++ + + Sbjct: 134 LGLKHHGVTTFGFVLSGRGLRSVGIVSDTSLVPQ-VFQIARSCQVMVVNVTLERRRPNLD 192 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDY------DMVLKSTPSRVVPAFDGMQF 266 H SL + + + I +LTHM + + SRV+ DGM Sbjct: 193 HLSLEDLKELLSEIPVPLVLLTHMGRGVLRLGPDAVASMFNHLSSRVICGEDGMVV 248 >gi|330827116|ref|YP_004390419.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans K601] gi|329312488|gb|AEB86903.1| cyclic-AMP phosphodiesterase [Alicycliphilus denitrificans K601] Length = 262 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 68/195 (34%), Gaps = 33/195 (16%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C T K RT +S + + ++VD G L E++ +D V TH H D Sbjct: 8 CSGTLAKGCRT-TSFLL--------DERILVDAGTGVGELTL-EEMQRVDHVFLTHSHLD 57 Query: 88 HIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 HI + L + RP+ V+A P + L + F + + I P Sbjct: 58 HIAALPLLLDAVGAHRARPLRVHALPATLDALR---AHVFNGVIWPDFTRIPTPHAPFVR 114 Query: 147 DVPI----CMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL 198 +P+ AG +E +P + ++G+ G Y D + Sbjct: 115 LLPLGVGDVFVVAGTPLEVLPARH---SVPAVGYAARGQRGWWIYSGDTEGQEPAFWRR- 170 Query: 199 QNLDFLIIDALKNGL 213 ++AL+ Sbjct: 171 -------VNALRQSP 178 >gi|227509461|ref|ZP_03939510.1| ribonuclease Z [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191173|gb|EEI71240.1| ribonuclease Z [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 315 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 88/293 (30%), Gaps = 75/293 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N+ + D G Sbjct: 2 MQIEFLGTGAGS----------------PGKFRNVSSLALRLLDE--INSVWLFDVGEGT 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL-- 118 Q+LR + ID + +H H DHI G+ GL Q P+D+Y +++ Sbjct: 44 QHQILRSTIRPRKIDKIFISHLHGDHIFGLPGLLSSRSFQGGFEPLDIYGPKGIKEYVEV 103 Query: 119 -------------------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 ++ F+ Y ++ I + + G + Sbjct: 104 SLKISESHLSYKIRFHELTKQTNGLIFEDNKFSVYAAPLD-HRILSIGYRVVEHDHPGEL 162 Query: 160 EAIPILQQH-GRISSLG-FRFGNVAYCTDVNAFP-----------------------AES 194 + Q H G + G D + Sbjct: 163 MVDKLTQLHIPSGPVYGRLKKGETVTLDDGRVVDGKQMIGPAQPGRIVTIIGDTRKTENA 222 Query: 195 LEKLQNLDFLI----IDALKNGLHSSHFSLS--ESLKKIELINPKNAILTHMH 241 ++ +N D L+ + + L SH+ + ++ + + + K +L H+ Sbjct: 223 VKLARNADVLVHESTLGKSETKLARSHYHSTNVQAAQIAKKAHVKKLLLNHIS 275 >gi|210624116|ref|ZP_03294197.1| hypothetical protein CLOHIR_02153 [Clostridium hiranonis DSM 13275] gi|210153192|gb|EEA84198.1| hypothetical protein CLOHIR_02153 [Clostridium hiranonis DSM 13275] Length = 267 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 83/237 (35%), Gaps = 53/237 (22%) Query: 53 NTTVIVDTG-PDFYMQV----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T +++D G + + E ++ + TH H DHI G + +K I Sbjct: 22 DTNILIDAGLSGKRITDGIKDIGENPDNLKGIFITHEHIDHIRG-----AGIVSRKFNIP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++A + + + + + + N +V EN+ A G I P + Sbjct: 77 IFANVETWRAMKDKLGKI-----ESS-----NMVVFENDK-----NYAIGDIIIRPFSIE 121 Query: 168 HGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIID-------------- 207 H + +G+ ++ TD+ + L ++++ Sbjct: 122 HDAANPVGYNLCAKGGSEKMSIATDIGTITENVRKNLYKSKLVVLESNYDKNMLLAGSYS 181 Query: 208 -ALKNGLHS--SHFSLSES----LKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 ALK + S H S E+ + I+ + +L H+ + ++ + T + Sbjct: 182 YALKRRVMSEVGHLSNDEAGKFCVDLIKN-GTERILLAHLSKENNFPELAYETSKGI 237 >gi|148259099|ref|YP_001233226.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acidiphilium cryptum JF-5] gi|146400780|gb|ABQ29307.1| coenzyme PQQ biosynthesis protein B [Acidiphilium cryptum JF-5] Length = 307 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 95/316 (30%), Gaps = 65/316 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPT---NPKNR-RTRSSLKISRVSERGSNTTVIVDT 60 ILG A G P+ G C +P + RT+++L +S + VI + Sbjct: 1 MKIIILGAAAGGGFPQWNCACGNCARARCGDPAAKPRTQAALAVSV----NDSDYVIFNA 56 Query: 61 GPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+L R + I A + T D G+ L++ +YA Sbjct: 57 SPDLRGQILATPALQPRSGLRDSPIAAAVLTGGDVDFTAGL-----LNLREGHRFGLYAG 111 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH--- 168 L + F+ LD P P+ + + G +EA + + Sbjct: 112 RRIFDLLGD--SQIFRVLDAGLVPRRELPVDVPTRLANGAGQDLGITVEAFVVPGKVALY 169 Query: 169 -----------GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIID----- 207 ++G R + Y + +++ ++ D Sbjct: 170 AEDVSRADFGSSEGDTIGLRIADDHGRAFFYIPSCARVSEDVARRVRGAALVLFDGTLWH 229 Query: 208 -------ALKNGL-----HSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVL 250 L H S S+ ++ + H++ D Sbjct: 230 DNEMIEAGLMPKTGARMGHISVSGPEGSIAAFAGLDVARKVFVHVNNSNPMILDDTPERA 289 Query: 251 KSTPSRVVPAFDGMQF 266 ++ + + A DGM+ Sbjct: 290 EAERAGWIVAHDGMEI 305 >gi|332088400|gb|EGI93518.1| ribonuclease Z [Shigella boydii 5216-82] gi|332090756|gb|EGI95849.1| ribonuclease Z [Shigella dysenteriae 155-74] Length = 305 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 85/299 (28%), Gaps = 81/299 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPA 192 +N ++ VP AG I Q +G G +A D Sbjct: 159 LNAQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDT-GPSD 217 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 +L+ + +D ++ +A H S ++ I+TH+ D Sbjct: 218 AALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD 276 >gi|38234422|ref|NP_940189.1| hypothetical protein DIP1852 [Corynebacterium diphtheriae NCTC 13129] gi|38200685|emb|CAE50381.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 272 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 79/250 (31%), Gaps = 37/250 (14%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILG S+G P NP S I + ++ +D G Sbjct: 16 SSMKLTILGSSGSVGAP-----------DNP-----SSGYLIQFENSP----SIAMDFGH 55 Query: 63 DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 ++ R Q + V+++H HADH L + ++ P A + + Sbjct: 56 GVMGELQRIQDPNDAHVVFSHMHADHCMDFPALMVW--RRFHPTQP-APGRNLCGGPKDA 112 Query: 123 RYCFKALDDRTYPPIVNPI-VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 L + + + + G + P H I S R Sbjct: 113 PVVLGRLSSNSIDKVDDMSDTFAFIPWEPGKEEIFGAVTITPWPTIH-PIDSYALRLKET 171 Query: 181 -----VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELI 230 +AY D A+ ++ ++ D + +A + H S +E+ + L Sbjct: 172 RTGKVIAYSGDA-AYAENLIDCARDADLFLCEATWGATSEGKAPDMHMSGAEAGRLARLA 230 Query: 231 NPKNAILTHM 240 K +L H+ Sbjct: 231 GAKKLVLVHI 240 >gi|25011331|ref|NP_735726.1| ribonuclease Z [Streptococcus agalactiae NEM316] gi|76787130|ref|YP_329909.1| ribonuclease Z [Streptococcus agalactiae A909] gi|76799588|ref|ZP_00781712.1| ribonuclease Z [Streptococcus agalactiae 18RS21] gi|77405392|ref|ZP_00782486.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77411710|ref|ZP_00788048.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|41017559|sp|Q8E4W1|RNZ_STRA3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123601673|sp|Q3K0P4|RNZ_STRA1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|24412869|emb|CAD46941.1| Unknown [Streptococcus agalactiae NEM316] gi|76562187|gb|ABA44771.1| tRNase Z [Streptococcus agalactiae A909] gi|76585058|gb|EAO61692.1| ribonuclease Z [Streptococcus agalactiae 18RS21] gi|77162218|gb|EAO73191.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77175974|gb|EAO78749.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|319745214|gb|EFV97533.1| ribonuclease Z [Streptococcus agalactiae ATCC 13813] Length = 309 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +N S + ++ + N + D G Sbjct: 1 MEIQFLGTGAGQ-------------PAKARN----VSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DH+ G+ G R + ++ +D+Y Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDIYGPVGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRT------------YPPIVNPIV-----------IENN 146 M L Y F D+ + Y ++ + +E Sbjct: 103 MTGLRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGYRVVQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCT------------DVNAFPA 192 +K AG + ++G +L G Y + D Sbjct: 163 LDAEALKLAGVPFGPLFGKVKNGENVTLEDGREIIAKDYISEPKKGKVITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ D L+ ++ + H + ++ + N K +L H+ Sbjct: 222 ASIRLALGADVLVHESTYGKGDERIAKSHGHSTNMQAADIAKQANAKRLLLNHVS 276 >gi|170725261|ref|YP_001759287.1| coenzyme PQQ synthesis protein B [Shewanella woodyi ATCC 51908] gi|169810608|gb|ACA85192.1| coenzyme PQQ synthesis protein B [Shewanella woodyi ATCC 51908] Length = 311 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 43/264 (16%) Query: 9 ILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG G P+ C P + RR SL + + SN + + P+F Sbjct: 32 ILGVAQDAGYPQTGCYAEHCMPGWNDLSLRRGAVSL---GLIDPTSNKKYMFEATPNFPE 88 Query: 67 QVLR------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + + +D V TH H H G+ L + VY P + L Sbjct: 89 QLYQLEKEAPNEQFELDGVFITHAHIGHYSGLMFLGREAMGADN-TPVYVMPKMGQFLQ- 146 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLGFRF 178 ++ + ++ IE + G ++ P + H ++G+R Sbjct: 147 ---------NNGPWNQLIKYNNIELQPLKNNHSQKLGSVKVTPFIVPHRDEYSETVGYRI 197 Query: 179 GNVA----YCTDVNAFPA---ESLEKLQNLDFLIIDAL---------KNGLHSSHFSLSE 222 + + D++ + ++ + +D+ +IDA ++ H +SE Sbjct: 198 EGPSKTALFIPDIDKWSEWETNIVDAINTVDYALIDATFFADGELPGRDMSKIPHPFVSE 257 Query: 223 SLKKIELI---NPKNAILTHMHVD 243 S+ + + + H + Sbjct: 258 SMALFQALSSQQKQKVWFIHFNHS 281 >gi|299069728|emb|CBJ41007.1| Beta-lactamase domain protein [Ralstonia solanacearum CMR15] Length = 306 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 79/281 (28%), Gaps = 67/281 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF- 64 H LG G P K+R S+L I + T +VD G Sbjct: 34 HLITLGT---RGGPIP-----------AKDRAQSSNLLIV------NGTYYLVDAGDGVL 73 Query: 65 -YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFES 121 + I V TH H DH G+ L ++ PI VY P + + Sbjct: 74 RRLTQAGANFRQIGKVFITHGHDDHTAGVGTLMSVAWDFQRHDPITVYGPPGTAALVKGA 133 Query: 122 FRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRIS------- 172 +Y + R P+ V +DV + I+ + H I Sbjct: 134 IQYFTVNAEIRWAEGRRTPLGDVFVGHDVAPGLIYQDQNIKVTAVENTHFHIPEGSPYYG 193 Query: 173 ---SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID------------------ 207 S +RF + + D E +N D L+ + Sbjct: 194 KYKSYSYRFQTPDRVIVFTGDT-GPSDAVTELARNADTLVSEVGSSEDVKQVLIKNGTWQ 252 Query: 208 --------ALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 A H + K + K +LTH+ Sbjct: 253 GMTPEQQTAFMRHEVEEHLTPDAVGKMAARAHVKTVVLTHL 293 >gi|312963440|ref|ZP_07777922.1| Coenzyme PQQ synthesis protein B [Pseudomonas fluorescens WH6] gi|311282246|gb|EFQ60845.1| Coenzyme PQQ synthesis protein B [Pseudomonas fluorescens WH6] Length = 287 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 83/283 (29%), Gaps = 67/283 (23%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQV-----------LREQVLSIDAVLYTHPH 85 RT+SS+ IS V+ + PD Q+ LR+ I A++ Sbjct: 21 RTQSSIAISDDGVNW----VLCNASPDIRAQLQGFAPMQPGRALRD--TGIGAIILMDSQ 74 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 DH G+ LR V+ + L F F L + + IE Sbjct: 75 IDHTTGLLSLREGCPH-----PVWCTDMVHEDLSTGFP-LFTMLTH--WNGGLAWNRIEL 126 Query: 146 NDVPICMKSAGGVIEAIPILQ------QHGRISSLGFRFGNVA----------YCTDVNA 189 + +P+ H G G + Y + Sbjct: 127 DASFSIPACPNLRFTPLPLRSAAPPYSPHRFDPHPGDNIGLIVEDLRTGGKLFYAPGLGK 186 Query: 190 FPAESLEKLQNLDFLIIDAL-----------------KNGLHSSHFSLSESLKKIELINP 232 A LE + D L++D + H + L+ +E + Sbjct: 187 VDAPLLEIMAGSDCLLVDGTMWDDDEMQRRGVGTRTGREMGHLAQNGPGGMLEVLEQLPK 246 Query: 233 KNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQFSS 268 + +L H++ ++ + +P V A+DGM Sbjct: 247 QRKVLIHINNTNP--ILDEDSPERAELVRRNVEVAYDGMSIQL 287 >gi|312869010|ref|ZP_07729187.1| ribonuclease Z [Lactobacillus oris PB013-T2-3] gi|311095436|gb|EFQ53703.1| ribonuclease Z [Lactobacillus oris PB013-T2-3] Length = 309 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 83/300 (27%), Gaps = 91/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + ER + + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVSSVALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y + Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGP-----VGIK 97 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 F + + ++ + I++ + H +I+ G+R Sbjct: 98 RFVTTALQVSESRLSYPLHFVEIDHEGEAFHDRG----FTVTARKLDH-KIACYGYRVVE 152 Query: 179 ----------------------------GNVAYCTDVNAF-------------------- 190 G V D Sbjct: 153 ADHPGELQVDKLRALNIPSGPVYGQLKAGKVVTLADGRTVNGQDFIGAPQKGRIIAICGD 212 Query: 191 ---PAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 A ++E Q+ D L+ D K H + ++ + + K +L H+ Sbjct: 213 TRKTANAVELAQDADVLVHESTFAKDEAKLARSYYHSTSLQAAEIAKRAGAKRLLLNHIS 272 >gi|222529825|ref|YP_002573707.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor bescii DSM 6725] gi|222456672|gb|ACM60934.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor bescii DSM 6725] Length = 241 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 58/182 (31%), Gaps = 35/182 (19%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT----Y 134 VL TH H DHI + L Y Q L + F + + Y Sbjct: 68 VLITHTHPDHIASLGQLILYCYYQ---------------LSKKITLIFPQPEIISNLLDY 112 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG----NVAYCTDVNA 189 I N I P + + I + Q H + G+ Y D + Sbjct: 113 MGIRN--EIYTLKTPQDFVNYLSKLTVISLEQVHVNELPCFGYLIYLNNITFYYSGDSKS 170 Query: 190 FPAESL-EKLQN-LDFLIID-ALKNGLHSSHFSLSESLKKIELINP---KNAILTHMHVD 243 P L + L+ +DFL D +N H H S+ E E I P K H+ Sbjct: 171 IPLYILTKFLEGEIDFLFQDTCSENHNHHPHLSIKE---LSEQIPPSKRKQVYCIHIDER 227 Query: 244 LD 245 D Sbjct: 228 FD 229 >gi|262340822|ref|YP_003283677.1| ribonuclease Z [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272159|gb|ACY40067.1| ribonuclease Z [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 305 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 34/183 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK TILG C + P N+ ++ + + ++D Sbjct: 1 MKKP-SLTILG----------------CHSSIPTNKFHPTAQILEMKG-----FSFLIDC 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G +Q+ + ++ I + +H H DH G+ GL F R + +YA + Sbjct: 39 GEGTQVQLRKAKIKFNKIIHIFISHLHGDHFFGLIGLLSTFHLLGREKSVSIYAPKGLKE 98 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + F++ + L Y IE + + IE I +H RI + GF Sbjct: 99 IIDIHFKWSYTRLKYCIYH-------IELSSNKLEKILENEKIEVFSIPLKH-RIYANGF 150 Query: 177 RFG 179 F Sbjct: 151 LFK 153 >gi|121533964|ref|ZP_01665790.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] gi|121307475|gb|EAX48391.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] Length = 260 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 54/224 (24%) Query: 50 RGSNTTVIVDTGPDFY--MQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T ++VD G Q L + +DA+L TH H DH+ G+ L ++ Sbjct: 18 DFDTTKILVDAGISARRIQQALCGIGTSLEEVDAILVTHEHRDHVSGLP-----TLTRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY P +++F ++ + G ++ Sbjct: 73 GLPVYTRPGTWENMFCR------------------ELIPSACCYELGDSLEIGNVKIEAF 114 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLH 214 H +GF F + TD+ + + D L++ D LK G + Sbjct: 115 SISHDAADPVGFNFYYRNRKYSVATDLGFVTDSVKKAIACSDVLVLESNHDVDMLKKGSY 174 Query: 215 S-----------SHFSLSESLKKIELINPKN----AILTHMHVD 243 H S +++ + + P+ L H+ + Sbjct: 175 PWSLKRRIMSSRGHLSNTDAGWALARL-PRKSKTEVFLAHLSQE 217 >gi|311743616|ref|ZP_07717422.1| metal-dependent hydrolase [Aeromicrobium marinum DSM 15272] gi|311312746|gb|EFQ82657.1| metal-dependent hydrolase [Aeromicrobium marinum DSM 15272] Length = 252 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 46/272 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P D +S + G +++D G Sbjct: 1 MRLTVVGCAGSYPGP---------DSA--------ASCYLLETEHEGRTWRLVLDLGNGS 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ----KRPIDVYAAPDCMKHLF 119 Q+ R +D +H H DH + + ++A +++ Sbjct: 44 LGQLQRYCDPRDVDGFAISHLHPDHCLDLTSYTVLSKYHPDGAYGRVPIHAPAGAAEYI- 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 P+ + + + G + H +++ G R Sbjct: 103 -------SVAGGPGGEPVCANLAFSVWEQDPVAE--IGPFRVVATQVDH-PVTAFGLRVE 152 Query: 180 ----NVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELIN 231 VAY D PA + ++ D + +A ++ + H + +E+ + Sbjct: 153 VQGHVVAYSGDTGPTPAID-DVARDADLFLCEASFLESRDNPPNLHLTGAEAGRFAASSG 211 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 + ++TH+ + V ++DG Sbjct: 212 SRLLLVTHI----PAWTDAAEVEADVKSSWDG 239 >gi|153875309|ref|ZP_02003169.1| Arylsulfatase [Beggiatoa sp. PS] gi|152068228|gb|EDN66832.1| Arylsulfatase [Beggiatoa sp. PS] Length = 311 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 74/205 (36%), Gaps = 36/205 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G + ++ D + +H H DH+ + + G+F + R ++ Sbjct: 62 GKSRLMLDAGGGTFLRFGEAKARIEEFDLLAISHFHTDHVADLPAILKGGFFSNRHRALE 121 Query: 108 V------YAAPDCMKHLFE-------SFRYC--FKALDDRTYPPIVNPIVIENNDVPICM 152 + + PD + +F Y F D +P +N I+ + Sbjct: 122 LSGPSGNFMFPDTHSFIEALFKKDQGAFHYLSDFLEDDGSLFP--LNLTTIDIKRTTPTV 179 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 ++ + HG + SL +R ++ + +D N + D LI Sbjct: 180 VFQNDEMKVSALGVPHGIVPSLAYRVDIGDKSLIFGSDQNGSNPAFIAFATGADVLI--- 236 Query: 209 LKNGLHSSHFSLSE-SLKKIELINP 232 +HF++ E + + + ++ Sbjct: 237 -------AHFAIPENAGRVAKRLHA 254 >gi|110803916|ref|YP_698680.1| ribonuclease Z [Clostridium perfringens SM101] gi|123341790|sp|Q0ST77|RNZ_CLOPS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110684417|gb|ABG87787.1| ribonuclease Z [Clostridium perfringens SM101] Length = 316 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 91/330 (27%), Gaps = 95/330 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R ++Y + + Sbjct: 41 QVSMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEEIYIIGPKGIKEVIDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + H LG+ Sbjct: 101 FLITLPYLPYKLNILEDVSDLEFMVKKEKMELVELNEKISSDLSIKTLELDHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKEVWSKLQRNEEVSLNRVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P E + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTEDIPGFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAADLAKKGQVKKLLL 277 Query: 238 THMHVDL----DYDMVLKSTPSRVVPAFDG 263 TH + +Y + DG Sbjct: 278 THFSPAINDPKEYIHNAREVFENSHAGSDG 307 >gi|163846967|ref|YP_001635011.1| beta-lactamase-like protein [Chloroflexus aurantiacus J-10-fl] gi|222524788|ref|YP_002569259.1| beta-lactamase-like protein [Chloroflexus sp. Y-400-fl] gi|163668256|gb|ABY34622.1| beta-lactamase-like protein [Chloroflexus aurantiacus J-10-fl] gi|222448667|gb|ACM52933.1| beta-lactamase-like protein [Chloroflexus sp. Y-400-fl] Length = 302 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 79/284 (27%), Gaps = 74/284 (26%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDA------VLYTHPHADHIHGIDGLRGY 98 + V + +I++ G +L E + A +L TH H DHI G Sbjct: 27 TCVEVEAEDHHIILNAGTGLR--MLGEALRQSHAPPNRFDLLITHTHWDHIIGFPFFAPL 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 F + ID+Y L + + + AG Sbjct: 85 FDPNSK-IDIYGLARTQSSLRTTLAGALSDPLLPL------TLDDLRAQINFFEIGAGHC 137 Query: 159 IEAIPILQ-----QHGRISSLGFRF----GNVAYCTDV---------------------- 187 +E P+ H +L +R G + + D Sbjct: 138 LELGPVRVRTALANH-PYRALAYRLETDQGVLTFIPDTGPFHTVLFGEQRIEWTGQPTAR 196 Query: 188 --------NAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPK 233 A LE D+LI DA H H S S++ + E + Sbjct: 197 SQSELRELAAMKEAILELAYRADWLIYDAQFTDAQYARFPHWGHSSASQAREIAEAAQVR 256 Query: 234 NAILTHMHVDLD----------YDMVLKSTPSR-VVPAFDGMQF 266 IL H D + + P + AF+GM+ Sbjct: 257 QLIL--FHHDPHRTDAELDQIVAEQQAAAVPGLIISAAFEGMEL 298 >gi|302035901|ref|YP_003796223.1| putative ribonuclease Z [Candidatus Nitrospira defluvii] gi|300603965|emb|CBK40297.1| putative Ribonuclease Z [Candidatus Nitrospira defluvii] Length = 252 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 30/235 (12%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHG----IDGLRGYFLKQKR- 104 ++ T ++D GP ++ V I +L++H HADH + Q Sbjct: 26 TDQTFLLDFGPRTLSNLIASGVDRHRITHILFSHFHADHFADFIPFFFDAVIFCKYQGGT 85 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ + K L + F + + + + E +D + G Sbjct: 86 RPPLTLIGPHGTAK-LMRAMMTTFPSFNRAPFR----VTIREVSDRSFRLGETG----IK 136 Query: 163 PILQQH-GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHS 215 P H R+ +G+R V Y D + + + + D I+D + Sbjct: 137 PGTVTHAPRLHCVGYRIEYQDHVVTYSGD-SLYCDNLVRLCREADLAILDCSFPENRPGA 195 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQF 266 H + + +L+H + + V + + A D ++ Sbjct: 196 GHLHAGLCGRVAQEAGINQLVLSHFYPIAERYDVCAQAGNHFSGRIRMARDLLKL 250 >gi|39996731|ref|NP_952682.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|39983612|gb|AAR35005.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|298505743|gb|ADI84466.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 256 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 70/230 (30%), Gaps = 57/230 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I + +++D G ++ +DA+ +H H DH+ G Sbjct: 14 SLFIET-----GESRILIDAGLSARELVRRLSLIGVDAAQLDALFISHEHTDHVRG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I V+ + + + + + Y Sbjct: 65 -AGVLARKYRIPVHVSYPTHREISGQIHGVYVTEFESGY------------------SFT 105 Query: 156 GGVIEAIPILQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 + P H +GF R G V TD+ +KL L++++ Sbjct: 106 FRDLLVDPFRITHDACDPVGFTVESREGKVGIATDLGTATRLVADKLAGCRALVVESNHD 165 Query: 209 ---LKNGLHSSHF------------SLSESLKKIELINP--KNAILTHMH 241 L +G + H + + E+INP + L H+ Sbjct: 166 EGMLMDGPYPWHLKQRIKSRHGHLSNNDTAALLAEVINPGLEGLFLAHLS 215 >gi|320010895|gb|ADW05745.1| ribonuclease Z [Streptomyces flavogriseus ATCC 33331] Length = 302 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 69/287 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q+LR V I+ + TH H DH G+ G+ + P V A P +H Sbjct: 39 GEGTQRQMLRAGVAAHDINRICVTHFHGDHALGLAGVIQRINLDQVPHPVTAHFPASGQH 98 Query: 118 LFESFRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVIE------A 161 F+ RY + + ++ + + ++S G + Sbjct: 99 FFDRLRYATAYRESVELTEAPVAADGVLATTDAYTLDGHRLSHPVESYGYRLTEPDRLRM 158 Query: 162 IPILQ-QH-------GRISSLGF-------------RFGNVAYCTDVNAFPAESLEKLQN 200 +P +H GRI G R A+ D + + Sbjct: 159 LPAKLAEHGIAGPDVGRIQRDGVLRGVPLAEVSETRRGQRFAFVMDT-RLCDGAFALAEK 217 Query: 201 LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ + H + ++ + + ++ +LTH Sbjct: 218 CDMLVIESTFLDEDGRLADDHGHLTAGQAARVAKESGVRHLVLTHFS 264 >gi|289192041|ref|YP_003457982.1| hypothetical protein MFS40622_0555 [Methanocaldococcus sp. FS406-22] gi|288938491|gb|ADC69246.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22] Length = 266 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 93/297 (31%), Gaps = 75/297 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT------TVI 57 LGCG G W I++ G + Sbjct: 2 RVEIIFLGCG--------GGRWAT----------------ITQKKATGGFRIHTNELRMH 37 Query: 58 VDTGPD--FYMQVLREQVLSIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKR 104 VD GP + L+ +A+ +H H DH G+ RG FL Sbjct: 38 VDPGPGAIVRLNELKISPWRTNALFISHCHPDHYTDGEIIVEAITQGMTKKRGVFLGSLS 97 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ + +H+ + YP + Sbjct: 98 VVEGFGE---YEHVVSKYHQSKLEKVQVLYP---------------KDEVELYDTTLKAT 139 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--NGLHSSHF 218 +HG +GFR G++ Y +D P +E + LI + ++ N H Sbjct: 140 HTKHGDPFGIGFRLSTIYGDIGYTSDTELIPEL-IEDFDGVRILIANIVRKKNERIKGHL 198 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 ++++ I + P+ I+ HM V + + + + ++T V+PA G++ Sbjct: 199 CSNDAIDLINSMSKKPELLIMNHMGVKMTNPQIEAEYISQNTGIEVIPAKLGLKVEL 255 >gi|21230454|ref|NP_636371.1| hypothetical protein XCC0994 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769552|ref|YP_244314.1| hypothetical protein XC_3250 [Xanthomonas campestris pv. campestris str. 8004] gi|21112017|gb|AAM40295.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574884|gb|AAY50294.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 250 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 ERG + +D G + AV TH H DH+ G++ L YF +++ Sbjct: 26 ERGGAPWLTIDCGSEGLTSYQAHYGQMPQAVFITHVHLDHVGGLERLFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRLA---DYPNVLAEGGANFWDAFQLVPVGEAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLQGALVWTGDTRPIPEMLARYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|50913817|ref|YP_059789.1| zinc-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|50902891|gb|AAT86606.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus pyogenes MGAS10394] Length = 269 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 25 PKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA L + K + + G ++ Sbjct: 80 DIYANEKTW-QLMDECNMLGKLDASQK------------HIFQRDKVLTFGDVDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTGIIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + N K L H+ +L + ++ Sbjct: 187 SLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVNQL 242 >gi|31793586|ref|NP_856079.1| ribonuclease Z [Mycobacterium bovis AF2122/97] gi|148823610|ref|YP_001288364.1| ribonuclease Z [Mycobacterium tuberculosis F11] gi|215404341|ref|ZP_03416522.1| ribonuclease Z [Mycobacterium tuberculosis 02_1987] gi|215412159|ref|ZP_03420923.1| ribonuclease Z [Mycobacterium tuberculosis 94_M4241A] gi|215427790|ref|ZP_03425709.1| ribonuclease Z [Mycobacterium tuberculosis T92] gi|215431350|ref|ZP_03429269.1| ribonuclease Z [Mycobacterium tuberculosis EAS054] gi|215446651|ref|ZP_03433403.1| ribonuclease Z [Mycobacterium tuberculosis T85] gi|218754136|ref|ZP_03532932.1| ribonuclease Z [Mycobacterium tuberculosis GM 1503] gi|219558402|ref|ZP_03537478.1| ribonuclease Z [Mycobacterium tuberculosis T17] gi|253798515|ref|YP_003031516.1| hypothetical protein TBMG_01567 [Mycobacterium tuberculosis KZN 1435] gi|254232545|ref|ZP_04925872.1| conserved hypothetcal protein [Mycobacterium tuberculosis C] gi|254365182|ref|ZP_04981228.1| conserved hypothetcal protein [Mycobacterium tuberculosis str. Haarlem] gi|254551454|ref|ZP_05141901.1| ribonuclease Z [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260187413|ref|ZP_05764887.1| ribonuclease Z [Mycobacterium tuberculosis CPHL_A] gi|260201533|ref|ZP_05769024.1| ribonuclease Z [Mycobacterium tuberculosis T46] gi|289443930|ref|ZP_06433674.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448050|ref|ZP_06437794.1| ribonuclease Z [Mycobacterium tuberculosis CPHL_A] gi|289553803|ref|ZP_06443013.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289570555|ref|ZP_06450782.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289746188|ref|ZP_06505566.1| ribonuclease Z [Mycobacterium tuberculosis 02_1987] gi|289751012|ref|ZP_06510390.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289754514|ref|ZP_06513892.1| ribonuclease Z [Mycobacterium tuberculosis EAS054] gi|289758535|ref|ZP_06517913.1| ribonuclease Z [Mycobacterium tuberculosis T85] gi|289762574|ref|ZP_06521952.1| ribonuclease Z [Mycobacterium tuberculosis GM 1503] gi|294994485|ref|ZP_06800176.1| ribonuclease Z [Mycobacterium tuberculosis 210] gi|297635011|ref|ZP_06952791.1| ribonuclease Z [Mycobacterium tuberculosis KZN 4207] gi|297732003|ref|ZP_06961121.1| ribonuclease Z [Mycobacterium tuberculosis KZN R506] gi|298525889|ref|ZP_07013298.1| ribonuclease Z [Mycobacterium tuberculosis 94_M4241A] gi|306780448|ref|ZP_07418785.1| hypothetical protein TMBG_00951 [Mycobacterium tuberculosis SUMu002] gi|306785198|ref|ZP_07423520.1| hypothetical protein TMCG_00507 [Mycobacterium tuberculosis SUMu003] gi|306789559|ref|ZP_07427881.1| hypothetical protein TMDG_00886 [Mycobacterium tuberculosis SUMu004] gi|306793884|ref|ZP_07432186.1| hypothetical protein TMEG_02774 [Mycobacterium tuberculosis SUMu005] gi|306798281|ref|ZP_07436583.1| hypothetical protein TMFG_01372 [Mycobacterium tuberculosis SUMu006] gi|306804156|ref|ZP_07440824.1| hypothetical protein TMHG_01601 [Mycobacterium tuberculosis SUMu008] gi|306808727|ref|ZP_07445395.1| hypothetical protein TMGG_00969 [Mycobacterium tuberculosis SUMu007] gi|306968557|ref|ZP_07481218.1| hypothetical protein TMIG_01085 [Mycobacterium tuberculosis SUMu009] gi|313659338|ref|ZP_07816218.1| ribonuclease Z [Mycobacterium tuberculosis KZN V2475] gi|41017536|sp|Q7TYN1|RNZ_MYCBO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|31619179|emb|CAD97291.1| CONSERVED HYPOTHETCAL PROTEIN [Mycobacterium bovis AF2122/97] gi|124601604|gb|EAY60614.1| conserved hypothetcal protein [Mycobacterium tuberculosis C] gi|134150696|gb|EBA42741.1| conserved hypothetcal protein [Mycobacterium tuberculosis str. Haarlem] gi|148722137|gb|ABR06762.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253320018|gb|ACT24621.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289416849|gb|EFD14089.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421008|gb|EFD18209.1| ribonuclease Z [Mycobacterium tuberculosis CPHL_A] gi|289438435|gb|EFD20928.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289544309|gb|EFD47957.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289686716|gb|EFD54204.1| ribonuclease Z [Mycobacterium tuberculosis 02_1987] gi|289691599|gb|EFD59028.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695101|gb|EFD62530.1| ribonuclease Z [Mycobacterium tuberculosis EAS054] gi|289710080|gb|EFD74096.1| ribonuclease Z [Mycobacterium tuberculosis GM 1503] gi|289714099|gb|EFD78111.1| ribonuclease Z [Mycobacterium tuberculosis T85] gi|298495683|gb|EFI30977.1| ribonuclease Z [Mycobacterium tuberculosis 94_M4241A] gi|308326685|gb|EFP15536.1| hypothetical protein TMBG_00951 [Mycobacterium tuberculosis SUMu002] gi|308330113|gb|EFP18964.1| hypothetical protein TMCG_00507 [Mycobacterium tuberculosis SUMu003] gi|308333953|gb|EFP22804.1| hypothetical protein TMDG_00886 [Mycobacterium tuberculosis SUMu004] gi|308337765|gb|EFP26616.1| hypothetical protein TMEG_02774 [Mycobacterium tuberculosis SUMu005] gi|308341427|gb|EFP30278.1| hypothetical protein TMFG_01372 [Mycobacterium tuberculosis SUMu006] gi|308344922|gb|EFP33773.1| hypothetical protein TMGG_00969 [Mycobacterium tuberculosis SUMu007] gi|308349233|gb|EFP38084.1| hypothetical protein TMHG_01601 [Mycobacterium tuberculosis SUMu008] gi|308353854|gb|EFP42705.1| hypothetical protein TMIG_01085 [Mycobacterium tuberculosis SUMu009] gi|326904024|gb|EGE50957.1| hypothetical protein TBPG_01913 [Mycobacterium tuberculosis W-148] gi|328458283|gb|AEB03706.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 280 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 82/266 (30%), Gaps = 58/266 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + ++ +VD G Sbjct: 2 LEITLLGTGSPIPDP---------DRAGP-------STLVRAGAQ-----AFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAPDCMKH 117 + + AVL TH H+DHI + + + P+ + P + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEV 100 Query: 118 LF-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + Y D T PP PI + G I P + Sbjct: 101 VEATLKAFGHDIGYRIAHHADLTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS--------- 216 ++GFR +V D P +SL++L D L+ ++ + + Sbjct: 157 TPTIGFRIESDGASVVLAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDI 214 Query: 217 ---HFSLSESLKKIELINPKNAILTH 239 H S+ E+ ++TH Sbjct: 215 CDYHSSVQEAAATANRAGVGTLVMTH 240 >gi|241889038|ref|ZP_04776342.1| beta-lactamase domain-containing protein [Gemella haemolysans ATCC 10379] gi|241864287|gb|EER68665.1| beta-lactamase domain-containing protein [Gemella haemolysans ATCC 10379] Length = 271 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 79/231 (34%), Gaps = 57/231 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ I +N +VD G + Q+ R + I+A+ TH H DHI G+ Sbjct: 14 SIYIEH-----NNFRCLVDAGLTGKKVVENLAQIER-DIKDINAIFVTHEHIDHIKGVG- 66 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K I VYA +++ + C + D + + Sbjct: 67 ----VLARKYNIPVYANALTWQNMTK----CGEISSDLKF------------NFEKEESK 106 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI----- 205 G + H I+ + F V+ TD + ++ +++ ++ Sbjct: 107 IFGDVVVNSFGVSHDAINPQFYTFECEGKRVSILTDTGYVSDKMIDYVKDSHTIVYESNH 166 Query: 206 -IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 + L +G + H S ++S + I N KN L H+ Sbjct: 167 EENVLLSGPYPWSTKQRILSDMGHLSNTDSANYLTKIVGDNTKNVFLAHLS 217 >gi|295838969|ref|ZP_06825902.1| ribonuclease Z [Streptomyces sp. SPB74] gi|197695525|gb|EDY42458.1| ribonuclease Z [Streptomyces sp. SPB74] Length = 301 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 70/239 (29%), Gaps = 49/239 (20%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R + D G Q+ + + + + TH H DH G+ G+ + P Sbjct: 28 RWDGEAFLFDPGEGTQRQMTHAGISATALHRLCVTHFHGDHSLGLAGVIQRVNLDRVPHP 87 Query: 108 VYAA-PDCMKHLFESFRYCFKALDDRTYPPIV----------NPIVIENNDVPICMKSAG 156 VYA P + F RY + P+ +E + + + G Sbjct: 88 VYAHYPASGEEYFRRLRYATAYYESVGITPVPVHEEGMLATTPAYTLETRRLSHPVDTVG 147 Query: 157 GVIE------AIP-ILQQH-------GRISSLGF-------------RFGNVAYCTDVNA 189 + P L H GR+ G R A+ D Sbjct: 148 YRLTEPDGVRMRPEALAAHGIEGPDVGRLRREGVLRGVRLEEVSEVRRGQRFAFVMDT-R 206 Query: 190 FPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + E + D L+I DA H H + ++ ++ +LTH Sbjct: 207 LCQGARELAEGCDLLVIESTFADEDAALAEEHG-HLTAGQAAALARDAGVRHLVLTHFS 264 >gi|222148290|ref|YP_002549247.1| metal dependent hydrolase [Agrobacterium vitis S4] gi|221735278|gb|ACM36241.1| metal dependent hydrolase [Agrobacterium vitis S4] Length = 555 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 46/227 (20%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + + ++VD G PD + ++ + A+ TH H Sbjct: 22 LALYGFGPPKNREWIMVDCGVTFPGPDLPGVDLVLPDIRFVLSQKN--RLKAIFITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY------CFKALDDRTYPPIVNP 140 DH G++ + + VYA+ L Y V P Sbjct: 80 DHYGGLNDIWP-----GLNVPVYASGFTAGMLEAKRNYEGTRAEIPVTPFKPGDKVHVGP 134 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLE 196 V+E +DV + +I P+ G + G ++ ++ TD Sbjct: 135 FVVEASDVNHSIPEPMSLIIRTPL----GNVIHTGDWKIDHAPSLGPLTD-----EARFR 185 Query: 197 KLQNLDFLII-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 L + L + +A++ G+ S +SE L+KI +T Sbjct: 186 ALGDEGVLAVMCDSTNAMREGVSPSEQEVSEGLRKIIQTAEGRVAIT 232 >gi|329730860|gb|EGG67238.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 21193] Length = 306 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNEHV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRNADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|282861813|ref|ZP_06270877.1| ribonuclease Z [Streptomyces sp. ACTE] gi|282563629|gb|EFB69167.1| ribonuclease Z [Streptomyces sp. ACTE] Length = 302 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 88/287 (30%), Gaps = 69/287 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSAR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q+LR V ID + TH H DH G+ G+ + P V A P +H Sbjct: 39 GEGTQRQMLRAGVAAHDIDRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHFPASGQH 98 Query: 118 LFESFRY--CFKALDDRTYPPIVN--------PIVIENNDVPICMKSAGGVIEAIPILQQ 167 F+ RY ++ + T P+ +++ + ++S G + + Sbjct: 99 FFDRLRYSTAYRESVELTEAPVAADGVLATTGAYTLDSRRLSHPVESYGYRLTEPDRRRM 158 Query: 168 -------H-------GRISSLGF-------------RFGNVAYCTDVNAFPAESLEKLQN 200 H GR+ G R A+ D + + Sbjct: 159 LPEKLAEHGIAGPDVGRLQRDGVLGGVPVEAVSEPRRGQRFAFVMDT-RLCDGAFALAEG 217 Query: 201 LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ + H + ++ + ++ +LTH Sbjct: 218 CDMLVIESTFLDEDGRLAADHGHLTAGQAARVARESGVRHLVLTHFS 264 >gi|229087947|ref|ZP_04220057.1| hypothetical protein bcere0022_45010 [Bacillus cereus Rock3-44] gi|228695360|gb|EEL48235.1| hypothetical protein bcere0022_45010 [Bacillus cereus Rock3-44] Length = 264 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G F L + I +L TH H+DHI G+ L +K Sbjct: 22 DKQKLLVDAGLSGKATEALFRQAEL--DIQDISGILVTHEHSDHIKGLG-----VLARKY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA + P + DV G IE Sbjct: 75 QLPVYANEKTWNAMEHLIGNI----------PTDQKFIFSIGDVK-----TFGDIEVESF 119 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F +A TD ++ + + ++ L+ G + Sbjct: 120 GVSHDAAEPMFYAFHHNGRKLALITDTGYVSDRMKGIIKGANAFVFESNHDVEMLRMGRY 179 Query: 215 S-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H S + +L ++I K+ L H+ +D + + + + ++V Sbjct: 180 PWSIKRRILSDVGHVSNEDAALAMTDVITDETKHIYLAHLSLDNNMKELARMSVAQV 236 >gi|328953215|ref|YP_004370549.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453539|gb|AEB09368.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 279 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 60/213 (28%), Gaps = 30/213 (14%) Query: 50 RGSNTTVIVDTGPDFYMQ----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +IVD G + E+ + TH H DHI G + + Sbjct: 33 SQDGDIIIVDAGSGIRRLGKNLMAAERFDY--TLFMTHSHWDHILGFPFFKPI-YDSRTR 89 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I + + + P I ND + G +E PI Sbjct: 90 ITILGCNRTQGDIKNLLAAAMRTP-FFPVPFSALEAEINYNDECVWSH-HIGPLEVFPIS 147 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAF---------PAESLEKLQNLDFLIIDA---- 208 H LG++F + TD N P E E N D LI DA Sbjct: 148 LSHPNGG-LGYKFVEAGKTFVFLTD-NELGYQHRGGLHPQEYTEFAFNADLLIHDAEYTP 205 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + H + E+L K L H Sbjct: 206 EEYQQTRRWGHSTYLEALDLAMQARVKRFGLFH 238 >gi|322368157|ref|ZP_08042726.1| ribonuclease Z [Haladaptatus paucihalophilus DX253] gi|320552173|gb|EFW93818.1| ribonuclease Z [Haladaptatus paucihalophilus DX253] Length = 308 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 24/118 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG S VP R SS+ ++R +R ++ D G Sbjct: 2 SMRVTFLGT--SGAVPTTD--------------RNPSSILVNREGDR-----LLFDAGEG 40 Query: 64 FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHL 118 Q++R ++ + TH H DHI GI GL F + P+ +Y + Sbjct: 41 TQRQMMRFGTGFTVSDLFITHLHGDHILGIPGLVQTWDFNDRDDPLMIYTPRGTGDDI 98 >gi|270291478|ref|ZP_06197700.1| beta-lactamase family hydrolase [Pediococcus acidilactici 7_4] gi|270280324|gb|EFA26160.1| beta-lactamase family hydrolase [Pediococcus acidilactici 7_4] Length = 245 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 82/215 (38%), Gaps = 32/215 (14%) Query: 53 NTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPI---D 107 +T +++D G +++ + L +DAVL TH H DH + L+ + L +K+ + Sbjct: 28 DTNLLLDAGSATLLELEKHLDPLDLDAVLLTHYHHDHTADLGVLQYRWQLNEKKKVATLP 87 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y D + + P + + G ++ Q Sbjct: 88 IYG----------------HTEDPLNFGALTWPNASKGISYQVNDVIKVGGLKISFEKTQ 131 Query: 168 HGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSSHF 218 H +++ R VA + +D F + + QN D LI D H Sbjct: 132 H-PVAAFATRIEEVATGKVFTFTSDTRYFAQLA-DFAQNSDLLITDTNFLSDYQGVKWHL 189 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + E+ + + + + I++H+ +D ++L+ T Sbjct: 190 TTKETAQLFDNAHAQRLIISHLSPKIDPKIMLEET 224 >gi|262046039|ref|ZP_06019003.1| ribonuclease Z [Lactobacillus crispatus MV-3A-US] gi|295692862|ref|YP_003601472.1| ribonuclease z [Lactobacillus crispatus ST1] gi|260573998|gb|EEX30554.1| ribonuclease Z [Lactobacillus crispatus MV-3A-US] gi|295030968|emb|CBL50447.1| Ribonuclease Z [Lactobacillus crispatus ST1] Length = 312 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + PI +Y + + Sbjct: 43 QHQILRTNIKLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PITIYGPSGIEEFVR 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + +YP +E + + G + + RI S GFR Sbjct: 102 TALK---VSRTKISYP----IRFVELAKSGLICEDKGFRVYTEQLDH---RIPSFGFRV 150 >gi|218461434|ref|ZP_03501525.1| putative hydrolase protein, beta-lactamase superfamily [Rhizobium etli Kim 5] Length = 276 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R ++ D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGKHRMLFDAGSGLREAGLSLLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + + IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLTPHEGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 H ++G+R ++A D+ P SLE +Q D ++ D Sbjct: 150 IKTFTLNHPG-GAIGYRIEWQGRSIALIYDIEHNPGSYDPVSLEMMQGADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKMAGAKRFALFH 241 >gi|126701278|ref|YP_001090175.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile 630] gi|254977311|ref|ZP_05273783.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-66c26] gi|255094642|ref|ZP_05324120.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CIP 107932] gi|255102868|ref|ZP_05331845.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-63q42] gi|255308688|ref|ZP_05352859.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile ATCC 43255] gi|255316395|ref|ZP_05357978.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-76w55] gi|255519054|ref|ZP_05386730.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-97b34] gi|255652238|ref|ZP_05399140.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-37x79] gi|260685192|ref|YP_003216477.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260688851|ref|YP_003219985.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile R20291] gi|306521955|ref|ZP_07408302.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-32g58] gi|115252715|emb|CAJ70559.1| putative metallo-beta-lactamase-like hydrolase [Clostridium difficile] gi|260211355|emb|CBA66985.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile CD196] gi|260214868|emb|CBE07656.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile R20291] Length = 265 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 70/278 (25%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 G G+S G C KN +++ + TT + D G D Sbjct: 8 GSGSS----------GNCHYIGYKN----TNILVDAGLSGKRITTGLKDIGVD------- 46 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + + TH H DHI G L +K I V+A + + Sbjct: 47 --ADKLKGIFITHEHVDHIKG-----AGILSRKFDIPVFANIKTWCSMKDKLGDIKDK-- 97 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GNVAYCT 185 N V EN+ + G I P +H +G+ F ++ T Sbjct: 98 --------NMKVFENDK-----TYSLGDIIVRPFSIEHDASDPVGYNFYTESDEKMSIAT 144 Query: 186 DVNAFPAESLEKLQNLDFLIID---------------ALKNGLHSS--HFSLSES----L 224 D+ + L ++++ ALK + SS H S ++ + Sbjct: 145 DIGCITQNIKKHLYKSKLVVLESNYDPNMLMMGSYTYALKKRVMSSTGHLSNEDAANFCV 204 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 + I ++ +L H+ + ++ + T V+ + D Sbjct: 205 ELINE-GTESILLAHLSKENNFPELAYETSKGVLASND 241 >gi|134300521|ref|YP_001114017.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053221|gb|ABO51192.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 248 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 28/182 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR- 96 R S S + + +++D G ++L+ + +DAV +H H DHI I LR Sbjct: 14 RVSGACSGYLLQDNGCNLLIDAGNGILSKMLQHINIEDLDAVFLSHLHPDHIMDIYSLRH 73 Query: 97 ---GYFL--KQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + R + +Y + + + + F F +I+ Sbjct: 74 AIEAANREGRMNRLVPLYMPTGPAEDFQRIKD-FTKAF------------QIHIIDEIPD 120 Query: 149 PICMKSAGGVIEAIPILQ--QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII 206 P + AG +P IS G + + D AF +E D L+ Sbjct: 121 PREITMAGLKARFVPAKHNLPAYSISIEGSK--RFIFSGDT-AFNEGLIELAIGADLLLC 177 Query: 207 DA 208 +A Sbjct: 178 EA 179 >gi|329934640|ref|ZP_08284681.1| ribonuclease Z [Streptomyces griseoaurantiacus M045] gi|329305462|gb|EGG49318.1| ribonuclease Z [Streptomyces griseoaurantiacus M045] Length = 301 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 82/295 (27%), Gaps = 85/295 (28%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T P+N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRPRNHNG--------YLLRWDAEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V ++ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGVVQRVNLDRVPHEITAHYPASGQH 98 Query: 93 --DGLRGYFLKQK---------------RPIDVYAAPDC-MKHLFESFRYCFKALDDRT- 133 D LR ++ Y + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVALTEAPVGTDGVLARTPAYTLEAHRLDHPVESYGYRLVEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P + I D+ I + + G + + ++ R A+ D Sbjct: 159 LPERLAAHGIAGPDIGRIQREGSLGGVPLEAVSEER--------RGQRFAFVMDT-RLCE 209 Query: 193 ESLEKLQNLDFLIIDA--LKNGLH----SSHFSLSESLKKIELINPKNAILTHMH 241 + D L+I++ L H H + ++ + ++ +LTH Sbjct: 210 GVHVLAEGCDLLVIESTFLDEDEHLATEYGHLTAGQAARVARDAGVRHLVLTHFS 264 >gi|169342512|ref|ZP_02863569.1| ribonuclease Z [Clostridium perfringens C str. JGS1495] gi|169299410|gb|EDS81476.1| ribonuclease Z [Clostridium perfringens C str. JGS1495] Length = 316 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 86/304 (28%), Gaps = 91/304 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R D+Y + + Sbjct: 41 QVSMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPKGIKEVIDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + +H LG+ Sbjct: 101 FLITLPYLPYKLNILEDASNLEFMVKKEKMELVELNEKISSDLSIKTLELEHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKEVWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P + + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTDDIPCFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLAKRGQVKELLL 277 Query: 238 THMH 241 TH Sbjct: 278 THFS 281 >gi|163756072|ref|ZP_02163188.1| ribonuclease Z [Kordia algicida OT-1] gi|161323946|gb|EDP95279.1| ribonuclease Z [Kordia algicida OT-1] Length = 302 Score = 59.8 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 105/323 (32%), Gaps = 81/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG A PT + T + ++ + N ++D G Sbjct: 1 MKLTILG-------------CYAATPT----KHTNPTAQVLEI----RNHIFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----PDCMK 116 +Q+ R +V I + +H H DH +G+ GL F+ R + +Y + Sbjct: 40 QVQLRRSKVKFSRIKHIFISHLHGDHFYGLIGLISTFMLLGRNADLHIYGPKGLKELTLL 99 Query: 117 HLF-----ESFRYCFKALD-----------DRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 L S++ CF L+ T I + N K + Sbjct: 100 QLRLTKSWTSYKLCFHELESDAPEILFEDEKVTVTTIPLNHRVYTNGFLFKEKEKERKLN 159 Query: 161 AIPIL-----------QQHGRISSL--GFRFGN------------VAYCTDVNAFPAESL 195 +L ++GR +L G N A+C+D FP + Sbjct: 160 INAVLNYDIEKCYYQNIKNGRDITLDSGEVISNEKLTFDPPKSQGYAFCSDTVYFPQ-II 218 Query: 196 EKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLD---- 245 ++++++D L +A H + H + ++ + N IL H D Sbjct: 219 DQIKDVDVLYHEATFLDKHDQLALKTKHTTAKQAATIAKDANVGQLILGHFSTRYDGFNE 278 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + ++ V A DG F Sbjct: 279 FKEEAETVFENVALADDGKVFEF 301 >gi|312793045|ref|YP_004025968.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180185|gb|ADQ40355.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 238 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 87/238 (36%), Gaps = 39/238 (16%) Query: 39 RSSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +S SE ++D G P+ Y L E+ +I+ VL TH H+DH+ + Sbjct: 21 NTSAYFEFDSEL-----FLIDCGEGVFPNLYKLKLLERYKTIN-VLITHTHSDHVATLGH 74 Query: 95 LRGYFLK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L Y + + V+ D + +L +++ ND+ I + Sbjct: 75 LLLYCFYELNKKVRVFFPEDSLIS----------SLLSSMGVAKDIYELVKLNDIFIYKE 124 Query: 154 SAGGVIEAIPILQQH-GRISSLGFRFG----NVAYCTDVNAFPAESLEK-LQN-LDFLII 206 + I I Q H I G+ Y D L+K L+ +DFL Sbjct: 125 ----KLTIISIEQAHVHEIPCFGYIIETGECRFFYSGDSKTINQLILDKFLKGEIDFLYQ 180 Query: 207 DALKNGLHSSHFSLSESLKKIELINPKN---AILTHMHVDLDYDMVLK---STPSRVV 258 D + +H LS + + +LI P+ H+ + ++++ P ++ Sbjct: 181 DTCSENFNGNHPHLSLA-ELSQLIPPEKRSYVFCIHLDIKFNFNLASSLGFRIPEQIQ 237 >gi|222034029|emb|CAP76770.1| ribonuclease Z [Escherichia coli LF82] gi|312946890|gb|ADR27717.1| ribonuclease Z [Escherichia coli O83:H1 str. NRG 857C] Length = 305 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 87/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA------- 111 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 112 ----------------------------------PDCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G + G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQELKAGKTIMLDDGRQINGADYLAVPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +LE + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|26248658|ref|NP_754698.1| ribonuclease Z [Escherichia coli CFT073] gi|91211564|ref|YP_541550.1| ribonuclease Z [Escherichia coli UTI89] gi|117624461|ref|YP_853374.1| ribonuclease Z [Escherichia coli APEC O1] gi|218559185|ref|YP_002392098.1| ribonuclease Z [Escherichia coli S88] gi|227887328|ref|ZP_04005133.1| ribonuclease Z [Escherichia coli 83972] gi|237704746|ref|ZP_04535227.1| ribonuclease Z [Escherichia sp. 3_2_53FAA] gi|300983331|ref|ZP_07176545.1| ribonuclease Z [Escherichia coli MS 45-1] gi|301049024|ref|ZP_07196010.1| ribonuclease Z [Escherichia coli MS 185-1] gi|41017561|sp|Q8FFK8|RNZ_ECOL6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|122423124|sp|Q1R9E5|RNZ_ECOUT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991101|sp|A1ADC0|RNZ_ECOK1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808630|sp|B7MG36|RNZ_ECO45 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|26109063|gb|AAN81266.1|AE016763_225 Protein elaC [Escherichia coli CFT073] gi|91073138|gb|ABE08019.1| protein ElaC [Escherichia coli UTI89] gi|115513585|gb|ABJ01660.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218365954|emb|CAR03698.1| binuclear zinc phosphodiesterase [Escherichia coli S88] gi|226901112|gb|EEH87371.1| ribonuclease Z [Escherichia sp. 3_2_53FAA] gi|227835678|gb|EEJ46144.1| ribonuclease Z [Escherichia coli 83972] gi|294491729|gb|ADE90485.1| ribonuclease Z [Escherichia coli IHE3034] gi|300299172|gb|EFJ55557.1| ribonuclease Z [Escherichia coli MS 185-1] gi|300408589|gb|EFJ92127.1| ribonuclease Z [Escherichia coli MS 45-1] gi|307554334|gb|ADN47109.1| ribonuclease Z [Escherichia coli ABU 83972] gi|307626192|gb|ADN70496.1| ribonuclease Z [Escherichia coli UM146] gi|315285864|gb|EFU45302.1| ribonuclease Z [Escherichia coli MS 110-3] gi|315292193|gb|EFU51545.1| ribonuclease Z [Escherichia coli MS 153-1] gi|323952064|gb|EGB47938.1| ribonuclease BN [Escherichia coli H252] gi|323956038|gb|EGB51791.1| ribonuclease BN [Escherichia coli H263] Length = 305 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 87/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA------- 111 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 112 ----------------------------------PDCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G + G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQELKAGKTIMLDDGRQINGADYLAVPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +LE + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|109899158|ref|YP_662413.1| beta-lactamase-like [Pseudoalteromonas atlantica T6c] gi|109701439|gb|ABG41359.1| beta-lactamase-like protein [Pseudoalteromonas atlantica T6c] Length = 318 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 77/231 (33%), Gaps = 30/231 (12%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ--VLREQVLSIDAVLYTHPHADHIHGI 92 + R SS I V++D GP + + +L TH H DH + Sbjct: 59 DGRVSSSYLIWH----NDKARVLIDAGPGSSVNFGASGADFADLQGILLTHLHVDHSGDL 114 Query: 93 DGLR--GYFLKQKRPIDVYAA------PDCMKHLFESFR--YCFKALDDRTYPPIVNPIV 142 YF + + V+ P+ ++L F L D T P Sbjct: 115 PAYVKGSYFTSRSEDLTVFGPAGNAMMPNTSEYLASLMGGDGAFAYLSDYTQPTSQADYH 174 Query: 143 IENNDVPICM-----KSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 I ++P+ + I HG I+++ +R ++ + D++ Sbjct: 175 INAQNIPLTPIKQHSQKISDDIIVTASPVHHGPIAAIAWRVDIGDCSITFSGDMSNKNNT 234 Query: 194 SLEKLQNLDFLII-DALKNGLHSS----HFSLSESLKKIELINPKNAILTH 239 ++ D L++ +A+ + H + K + N +L+H Sbjct: 235 LATLAKDSDILVMHNAVPQSASGAAINLHMRPLDIGKIAQQANANRVVLSH 285 >gi|260221901|emb|CBA30928.1| hypothetical protein Csp_C26000 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 261 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 17/152 (11%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C K+ RT +S + V++D G L E + ID V TH H D Sbjct: 8 CSGAIAKHCRT-TSFLL--------GAKVLIDAGTGVGDLTLDE-MQKIDHVFLTHSHLD 57 Query: 88 HIHGIDGLRGYFL-KQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIE 144 HI + + ++ +PI +Y + L + F D P + Sbjct: 58 HIAALPLMLDAVGARRDKPISLYGLQSTLDALKT---HIFNDVIWPDFLKIPSAESPFLR 114 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + ++ + + QH + +LG+ Sbjct: 115 LFPIEVGQQTLVDGLLVEALPAQHS-VPALGY 145 >gi|311068985|ref|YP_003973908.1| ribonuclease Z [Bacillus atrophaeus 1942] gi|310869502|gb|ADP32977.1| ribonuclease Z [Bacillus atrophaeus 1942] Length = 308 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 59/179 (32%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA + P +N SS+ + + ER + + D G Sbjct: 1 MELLFLGTGAGM-------------PAKSRNV---SSIALKLLEER--RSVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DH++G+ GL G Q + +Y + Sbjct: 43 QHQILHTSIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTIYGPKGIRAFIET 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S TYP +IE + I HG + + G+R Sbjct: 103 SLN---VTATRLTYP----LAIIEIEEGVIFEDDQ---FTVTAKPVIHG-VPAFGYRVQ 150 >gi|157144795|ref|YP_001452114.1| ribonuclease Z [Citrobacter koseri ATCC BAA-895] gi|166991097|sp|A8ADW5|RNZ_CITK8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157082000|gb|ABV11678.1| hypothetical protein CKO_00522 [Citrobacter koseri ATCC BAA-895] Length = 305 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 46/186 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQAGL-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PD 113 Q+L +D + +H H DH+ G+ GL R + P+ +Y Sbjct: 42 GTQHQMLNTAFNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGNAQ-PLTIYGPKGIREF 100 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L S + YP +E ++ G+ + +H + Sbjct: 101 TETALRLSGSWT-------DYP-------LEIVEITAGEILNDGLRKVTAFALEH-PLEC 145 Query: 174 LGFRFG 179 G+R Sbjct: 146 YGYRIE 151 >gi|325103868|ref|YP_004273522.1| RNAse Z [Pedobacter saltans DSM 12145] gi|324972716|gb|ADY51700.1| RNAse Z [Pedobacter saltans DSM 12145] Length = 303 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 35/182 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + TILG S P + R +S ++ + + +++D Sbjct: 1 MK--FEVTILG--NSSATPIFS--------------RNPTSQILNI-----NESLLMIDC 37 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+L ++ I + +H H DH G+ GL +++P++++ + Sbjct: 38 GEGTQQQMLLYEIKYNRISDIFISHLHGDHFFGLIGLISSMNLNGRRKPLNLFGPQGLLD 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + +Y D +N ++ N+ + ++ +E IP+ RI GF Sbjct: 98 IIQIQLKY-----SDTRLIFDLNFTALDPNNTGLVYETRDFTVETIPLNH---RIPCTGF 149 Query: 177 RF 178 Sbjct: 150 IV 151 >gi|310642368|ref|YP_003947126.1| ribonuclease z [Paenibacillus polymyxa SC2] gi|309247318|gb|ADO56885.1| Ribonuclease Z [Paenibacillus polymyxa SC2] Length = 320 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP I +R +S+ + + ER + + D G Sbjct: 11 MELYFLGTNA--GVPTI--------------QRNVTSIALRLLEER--RSMWLFDCGEGT 52 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +VLR ++ ++ + TH H DH+ G+ GL Q P+ VY P +++ Sbjct: 53 QQEVLRSPLKLSRLEKIFITHLHGDHLFGLPGLLSSRAYQGGTAPLTVYGPPGLQQYIEL 112 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +L ++E+ + G L H RI S G+R Sbjct: 113 -------SLGISQSRINYQLHIVEHTGGVLFDD---GQFRVESALLDH-RIDSYGYRI 159 >gi|241764337|ref|ZP_04762365.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|241366293|gb|EER60836.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 262 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 54 TTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++VD G R + IDA+ TH H+DHI + + + I V Sbjct: 27 RRLLVDCGFGIRQLATRLGTAGLRIDEIDAIFITHEHSDHIGCVQAVA-----LRHRIPV 81 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + P ++ ++ E +D+ G + P H Sbjct: 82 WMSAGTYAAM---------------GSPDLDGLLHEAHDMA---AIDLGALSLRPFTVPH 123 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 L + + TD+ LE+LQ L+++A Sbjct: 124 DAREPLQLHCSDGAHHLGILTDLGHASNHVLEQLQGCHALLLEA 167 >gi|253733248|ref|ZP_04867413.1| ribonuclease Z [Staphylococcus aureus subsp. aureus TCH130] gi|253728788|gb|EES97517.1| ribonuclease Z [Staphylococcus aureus subsp. aureus TCH130] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|256076514|ref|XP_002574556.1| zinc phosphodiesterase [Schistosoma mansoni] gi|238659765|emb|CAZ30789.1| zinc phosphodiesterase, putative [Schistosoma mansoni] Length = 839 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 94/326 (28%), Gaps = 87/326 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG +S P R S + + + + +++D G Sbjct: 467 EITFLGTASSS----------------PNKYRNISCILM----QLDPDNYIMLDCGEGSL 506 Query: 66 MQVLREQ--------VLSIDAVLYTHPHADHIHGIDG--------LRGYFLKQKRPIDVY 109 Q+ + + +L TH HADH G+ L+ + Q + Sbjct: 507 SQLYALHGVEKGNDILRKLRLILVTHMHADHHGGVFTVALVRSNLLKSDGIDQSNCLLPV 566 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND----------------VPICMK 153 P H +F F D+ P + PI+ + +D Sbjct: 567 LTPSEFCHWLTNFNKLFHY--DQIVDPFIIPIIYDKHDKNSNPSWVLNMKRNETENWLKL 624 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN-------------------------VAYCTDVN 188 I P+ H R SS F N + Y D Sbjct: 625 LEQLDINIRPVKVPHTR-SSWAFIIDNPYPFKNLVNSKNIAENCSEIQRKWSIVYSGDTP 683 Query: 189 AFPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHV 242 + P +N D LI +A N + + H + S++++ +N +L H Sbjct: 684 SCPELVRAG-KNCDLLIHEATVNDEYVDLAVKAKHSTTSQAIQAGRDMNASFILLNHFSQ 742 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQFSS 268 + S V +FD M Sbjct: 743 RYGRVPPIDEFKSDVAASFDFMTVKF 768 >gi|218960879|ref|YP_001740654.1| hypothetical protein CLOAM0553 [Candidatus Cloacamonas acidaminovorans] gi|167729536|emb|CAO80448.1| hypothetical protein CLOAM0553 [Candidatus Cloacamonas acidaminovorans] Length = 245 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 89/250 (35%), Gaps = 49/250 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G G+P++ ++ SS+ I + N ++ D G Sbjct: 1 MELTILGSG--PGLPQL-------------DKHL-SSILIRK-----ENNLILADCGDSC 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLF- 119 ++L +V +DA+ TH H DH+ G+ + +KR + ++ L Sbjct: 40 AHRLLEHKVAAEELDAIFITHYHPDHLDGLFMVLQMLYLQNRKRDLLLFLPERPASFLEI 99 Query: 120 --------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + F + D + I ND S + +P + + Sbjct: 100 LQLMYTYPQKFGFNLLIRDIEQAELYFDWIYAVPNDHLYRYASIISEYK-LPNQMKSWSL 158 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIEL-- 229 G + G Y +D+ ++ L+ +++DA H E+ + I+L Sbjct: 159 CFTG-KQGKFVYTSDIET-TDCIMDTLKEAHTVLVDA----GHP------EAEQIIKLKY 206 Query: 230 INPKNAILTH 239 K ILTH Sbjct: 207 TAIKKIILTH 216 >gi|124022243|ref|YP_001016550.1| beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9303] gi|166991497|sp|A2C725|RNZ_PROM3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123962529|gb|ABM77285.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Prochlorococcus marinus str. MIT 9303] Length = 318 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 53/179 (29%), Gaps = 29/179 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R S R+ +R + D G Sbjct: 1 MQVTFLGT--SSGVPT---------------RARNVSAVALRLPQRAEL--WLFDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q LR + + V +H H DH+ G+ GL +D+Y +L Sbjct: 42 QHQFLRSDLRLSQLRRVFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGPDPLESYLQG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 R + YP + + + + I H R+ + +R Sbjct: 102 VLR---NSSTRIGYP--LKVHRVRDAAEQNLIVFEDKDILVRCTPLTH-RVPAYAYRVE 154 >gi|20091207|ref|NP_617282.1| arylsulfatase [Methanosarcina acetivorans C2A] gi|19916321|gb|AAM05762.1| arylsulfatase [Methanosarcina acetivorans C2A] Length = 251 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 93/286 (32%), Gaps = 59/286 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ P+ R +S + + R +++D G Sbjct: 1 MEIKFLGTGVAI----------------PQKGRVQSGVLV-----RLEEKPLLIDCGSGV 39 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFES 121 + V +D VL +H H DH+ + L + + + VY + Sbjct: 40 LSRFPDAGVSHTEVDTVLLSHLHLDHVADLVPLIKANWLRGKTDMRVYGPKGTDDWFSQV 99 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 ++ D V+ +IE + G E H + +LG+R Sbjct: 100 IG-AYEYFQD-----AVDVDIIELSP-GKEFTPEGFDCEITCASALHS-VPTLGYRISAE 151 Query: 179 -GNVAYCTD---VNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESL-KKIE 228 G + Y D ++E D LI + +K H++ +L+E Sbjct: 152 AGEIVYSGDTEPCRDIMDLAVEA----DLLIHECSFPAGIKVTNHTTPDTLAEMFGDYNG 207 Query: 229 LINPKNAILTHMHVDL-DYD-MVLKSTPSRVV----PAFD--GMQF 266 I + LTH + ++ ++ + V A D G++ Sbjct: 208 EIG--SICLTHFYPEMRGHEKEAVYRLRGYVEGEVILAEDLMGLEL 251 >gi|317495985|ref|ZP_07954347.1| ribonuclease Z [Gemella moribillum M424] gi|316913889|gb|EFV35373.1| ribonuclease Z [Gemella moribillum M424] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 89/333 (26%), Gaps = 108/333 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + + + + + D G Sbjct: 1 MKLQFLGTGA--GLPA---------------KFRNTQSFVFNFMQE-LKECWMFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP-IDVYAA----PDC 114 Q+LR + I + +H HADHI G+ G R + L K + +Y Sbjct: 43 QHQILRTNIKPTKITKIFISHLHADHILGLIGFLSSRNFLLDSKESGVTIYGPVGIRQFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 ++L F +C D + +I+N + H I Sbjct: 103 KQNLL--FTHCSLNFDVKYVEFSSEQCIIDNK-----------TVVVSTYPLNH-NIECF 148 Query: 175 GFRF-------------------------------GNVAY-------------------- 183 G++ + Y Sbjct: 149 GYKIIFKNQKGSLDAEKLKKLGIMPGPFYKNIKEQDSFVYNETTYNSSEFLSEDKPKKEI 208 Query: 184 --CTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSS----HFSLSESLKKIELINPKN 234 D FP + E ++N D +I + + H + H S+ + I K Sbjct: 209 AIIPDTRYFPQLN-EFVKNSDIIISECTYLDEKDAHHARKNYHLSILDIENFITESTVKR 267 Query: 235 AILTHMHVDLDYDMVLKSTPS-----RVVPAFD 262 LTH+ D D +V A D Sbjct: 268 LFLTHISARYDVDTEKSVVEKIDKTIKVSIAHD 300 >gi|319648474|ref|ZP_08002690.1| hypothetical protein HMPREF1012_03729 [Bacillus sp. BT1B_CT2] gi|317389553|gb|EFV70364.1| hypothetical protein HMPREF1012_03729 [Bacillus sp. BT1B_CT2] Length = 264 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ L +K Sbjct: 22 DDHAFLVDAGLSGKAMEGLMAQIDR-KLDQLDGIFVTHEHSDHIKGLG-----VLARKYE 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA K + + K + + + P+ + G ++ Sbjct: 76 LPVYANEKTWKAME---GHIGKMDNGQKFV------------FPMETVKSFGSLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|302344720|ref|YP_003809249.1| metal-dependent hydrolase [Desulfarculus baarsii DSM 2075] gi|301641333|gb|ADK86655.1| metal-dependent hydrolase [Desulfarculus baarsii DSM 2075] Length = 274 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 72/243 (29%), Gaps = 37/243 (15%) Query: 56 VIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G ++L E +L TH H DH G+ + + P Sbjct: 39 LVIDGGSGARELGRRLLAEGAGE-TLLLMTHLHWDHTMGLPFFGPL-YAPGWRVRLGGWP 96 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + L F + L I + + G +E H + Sbjct: 97 RALAGLAGMFGRV-EGLGRFPVEFGQLAARIVQDPALAAPRFKLGPLEVRTTPLNHPQ-G 154 Query: 173 SLGFRFG----NVAYCTDVNAFPAESLE------KLQNLDFLIIDA------LKNGLHSS 216 ++G RF +A+ +D N + Q +D L+ DA + Sbjct: 155 AIGLRFEAHGRALAFISD-NELDPAAAASQRLPRFCQGVDVLVHDAQFEPDEMPARKGWG 213 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDY---------DMVLKSTPSR--VVPAFDGMQ 265 H +++ ILTH D D + ++ R V A G+ Sbjct: 214 HSDWRSAVELARAAGVGRLILTH--HDPDRVDDQVEAIVEKARRAAGPRLLVQAAHVGLT 271 Query: 266 FSS 268 Sbjct: 272 VEI 274 >gi|299143494|ref|ZP_07036574.1| VicX protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517979|gb|EFI41718.1| VicX protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 265 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 62/226 (27%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT +++D G + + + V IDA+ TH H DH+ G+ L ++ + Sbjct: 25 NTKILIDAGLSGKKIEELLSSINVSVDEIDAIFVTHEHLDHVKGVG-----VLSRRHNLK 79 Query: 108 VYAAPDCM-------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+A + + K + Y F+ N+ P K + Sbjct: 80 VFANNNTLNAMLPITKEIKAENTYVFE------------------NERPFYFK----DLY 117 Query: 161 AIPILQQHGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------- 208 PI H F ++ TD + LE++++ D ++A Sbjct: 118 INPIGTFHDCSCGSCFSIIGDKKISLVTDTGYINEDILEQIKDSDLYYLEANHDFEMLMN 177 Query: 209 --------LKNGLHSSHFSLSESLKKIELINPKN---AILTHMHVD 243 + + H S + + ++ + + +L+H+ D Sbjct: 178 GSYSWSLKQRIASNKGHLSNKNAAEALDKLLNRKKEIVMLSHLSND 223 >gi|229821217|ref|YP_002882743.1| beta-lactamase [Beutenbergia cavernae DSM 12333] gi|229567130|gb|ACQ80981.1| beta-lactamase domain protein [Beutenbergia cavernae DSM 12333] Length = 265 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 83/261 (31%), Gaps = 53/261 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT----VIVDT 60 T++GC S P + G T V++D Sbjct: 1 MRLTVIGCSGSTSGPASPSSC----------------YLVQAEGPDGFGGTRTWSVVLDL 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ----KRPIDVYAAPDCM 115 G + +L + IDAV TH HADH+ + GL Y + P+ V Sbjct: 45 GSGAFGGLLEHVEPAEIDAVALTHLHADHVVDVAGLHVYLRYHPQGPRGPVRVLGPEGTD 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + A DD P+ + IE ++ +EA + + ++G Sbjct: 105 ERIRD----LVMAGDDE---PVTEQLAIEEWPPGGAVQVGPLRLEAAAVRHP---VPAVG 154 Query: 176 FRF----------GNVA--YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HFS 219 R G+ Y D ++ P D L+ +A S H + Sbjct: 155 IRVTGPREGVGDAGDAVLLYTGDTDSCPGVE-ALADGADVLLAEAAFEENRESVRGIHLT 213 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 214 GRRAGELAQG-RAGRLVLTHL 233 >gi|306834460|ref|ZP_07467573.1| metallo-beta-lactamase [Streptococcus bovis ATCC 700338] gi|304423262|gb|EFM26415.1| metallo-beta-lactamase [Streptococcus bovis ATCC 700338] Length = 258 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYF---- 99 S + +++D G ++ +E L +DAV+ +H H DH+ + LR YF Sbjct: 21 SYLVTSEDGFQLLMDCGSRAVTELEKEISPLDLDAVIISHYHPDHVADLGVLRHYFQLYP 80 Query: 100 --LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 L + + + +Y D++ + + V + + G Sbjct: 81 KHLWEPKILPIYG----------------HTEDEQEFAKLTLDGVSQGKAYDVNGVEKIG 124 Query: 158 VIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + I H + FR + + D F + D + D Sbjct: 125 PFDITFIKTVH-PVPCYAFRIVEHATGQTLVFTGDTGYFEGLD-KFAAGADLFLADVYLY 182 Query: 212 ---GLHSSHFSLSESLKKIELINPKNAILTH 239 H +H + E+ + ++ + +LTH Sbjct: 183 AGNENHPAHLTTKEAGQIAKVAGVTSLVLTH 213 >gi|289550723|ref|YP_003471627.1| Ribonuclease Z [Staphylococcus lugdunensis HKU09-01] gi|289180255|gb|ADC87500.1| Ribonuclease Z [Staphylococcus lugdunensis HKU09-01] Length = 307 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 99/318 (31%), Gaps = 83/318 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGESKPLTLVGPHGIKAFVE 102 Query: 112 ------------PDCMKHLFESFRYC---FKALDDRTYPPIVN-PIVIENNDVPICMK-S 154 P + + F Y FK IV+ +E P + Sbjct: 103 TTLSLSESHLNYPITFIEIDDGFSYHHNGFKVTAKVLNHGIVSYGYRVEAPTTPGKINVE 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAF--PAESLEKL------------- 198 A + P + + F F N+ Y + D P + Sbjct: 163 ALKALGLEPGPKYQEVKDNDTFEFNNIIYKSQDFKGLAKPGPIIAIFGDTKPCANEKIIA 222 Query: 199 QNLDFLIID--------ALKNGLHSSHFSLSESLKKIELINPKNAILTHM---------H 241 Q +I + AL N H SH + + + I + K ++THM H Sbjct: 223 QGAQLMIHEATYIEGDKALANNYHHSH--IDDVFQLIHQAHVKQTLITHMSNRYNKEDIH 280 Query: 242 VDLDYDMVLKSTPSRVVP 259 ++ + + P+ + Sbjct: 281 HIYNHLLQQDNVPNFIFV 298 >gi|226359597|ref|YP_002777375.1| hypothetical protein ROP_01830 [Rhodococcus opacus B4] gi|226238082|dbj|BAH48430.1| hypothetical protein [Rhodococcus opacus B4] Length = 395 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 85/287 (29%), Gaps = 80/287 (27%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQK------ 103 T ++D G Q R + + ++ TH HADHI YFL Sbjct: 97 DGATYVIDCGRSSTTQFARAGLRFDGLRSIFITHLHADHIA---DYYNYFLLAGSIPNQE 153 Query: 104 ------RPIDVYAA---------------------------PDCMKHLFESFRY----CF 126 P+ V+ + ++F Y Sbjct: 154 TRDALANPVSVFGPGPAGGLPEKFGGGQAPTVSAEDPTPGLAAFTEKCHDAFAYSSNVFL 213 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL-----------QQHGRI-SSL 174 + R +V+ I DV ++ P++ HG + S Sbjct: 214 RDTGIRDIRTLVDVHEIAVPDVGASYTMTSPRMDPFPVMEDDHVAVTAVLVPHGPVFPSF 273 Query: 175 GFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------------SH 217 FRF G+V + D + + + + D L+ +A+ + SH Sbjct: 274 AFRFDTAHGSVTFSGDTS-YSDNLIALARGSDVLVHEAINVQGPNVSLPPAAMDHMLQSH 332 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLK-STPSRVVPAFDG 263 + + + +L+H+ D D + + + P FDG Sbjct: 333 VEVQKVGAIARAAGVRTLVLSHLS-DFDEEPLDPVRWRKWIEPEFDG 378 >gi|221052866|ref|XP_002261156.1| Metallo-hydrolase/oxidoreductase [Plasmodium knowlesi strain H] gi|194247160|emb|CAQ38344.1| Metallo-hydrolase/oxidoreductase, putative [Plasmodium knowlesi strain H] Length = 812 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + + LG G P R SS + ++ N + D G Sbjct: 323 RSNWKLIFLGTG----------------SMYPSTNRGTSSFLLQTTKKKC-NEAFLFDCG 365 Query: 62 PD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 + +Q ++ I + TH H DH G+ + L+ I++Y + L Sbjct: 366 ENTFIALQKASIKISKIKNIFLTHLHGDHCLGVISVLT-MLRNANTINIYGPEGTHRFLK 424 Query: 120 ESFR 123 +F Sbjct: 425 NTFS 428 >gi|91776036|ref|YP_545792.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylobacillus flagellatus KT] gi|122399779|sp|Q1H0N6|PQQB_METFK RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|91710023|gb|ABE49951.1| Coenzyme PQQ biosynthesis protein B [Methylobacillus flagellatus KT] Length = 305 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 91/317 (28%), Gaps = 69/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG A G P+ + CD +RT+SS+ +S V+ +T Sbjct: 1 MHIHVLGSAAGGGFPQWNCNCPNCDGLRKGTIKAKKRTQSSICVSADGINW----VLFNT 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I ++ DH G+ LR +K+ ++Y Sbjct: 57 SPDILQQIQEFAPLQPGRAIRDSGIVGIVLIDAQIDHTTGLLMLREGQVKR----EIYCT 112 Query: 112 PDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + L YC D PI P +A + A P Sbjct: 113 DMVYQDLTTGNPLLNILDHYCGVNRHD---IPIDGKHSFSVEHAPGLRFTAVALKSAAPP 169 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H G G + Y + ++ D +++D Sbjct: 170 YSPHRHDPHPGDTIGVLIEDLNNGKKAFYAPGLGEIEPHLPALMEQADCIMVDGTFWTDT 229 Query: 209 --------LKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVDL-----DYDMV 249 K H + E L + +L H++ D Sbjct: 230 EMLDMGLMSKKARDIGHNPQSGPGGMMEVLD--GYPGARR-VLIHINNTNPILREDSAER 286 Query: 250 LKSTPSRVVPAFDGMQF 266 ++ T + A+DGM Sbjct: 287 VELTRRGIEVAYDGMDI 303 >gi|15924494|ref|NP_372028.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus Mu50] gi|15927085|ref|NP_374618.1| hypothetical protein SA1335 [Staphylococcus aureus subsp. aureus N315] gi|148267988|ref|YP_001246931.1| ribonuclease Z [Staphylococcus aureus subsp. aureus JH9] gi|150394053|ref|YP_001316728.1| ribonuclease Z [Staphylococcus aureus subsp. aureus JH1] gi|156979823|ref|YP_001442082.1| hypothetical protein SAHV_1492 [Staphylococcus aureus subsp. aureus Mu3] gi|253314872|ref|ZP_04838085.1| hypothetical protein SauraC_01605 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006290|ref|ZP_05144891.2| hypothetical protein SauraM_07475 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793581|ref|ZP_05642560.1| ribonuclease Z [Staphylococcus aureus A9781] gi|258411119|ref|ZP_05681399.1| ribonuclease Z [Staphylococcus aureus A9763] gi|258419917|ref|ZP_05682878.1| ribonuclease Z [Staphylococcus aureus A9719] gi|258437335|ref|ZP_05689319.1| ribonuclease Z [Staphylococcus aureus A9299] gi|258443540|ref|ZP_05691879.1| ribonuclease Z [Staphylococcus aureus A8115] gi|258446747|ref|ZP_05694901.1| ribonuclease Z [Staphylococcus aureus A6300] gi|258448662|ref|ZP_05696774.1| ribonuclease Z [Staphylococcus aureus A6224] gi|258454278|ref|ZP_05702248.1| ribonuclease Z [Staphylococcus aureus A5937] gi|269203131|ref|YP_003282400.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus ED98] gi|282893003|ref|ZP_06301237.1| ribonuclease Z [Staphylococcus aureus A8117] gi|282928974|ref|ZP_06336561.1| ribonuclease Z [Staphylococcus aureus A10102] gi|295406624|ref|ZP_06816429.1| ribonuclease Z [Staphylococcus aureus A8819] gi|296276346|ref|ZP_06858853.1| ribonuclease Z [Staphylococcus aureus subsp. aureus MR1] gi|297245792|ref|ZP_06929657.1| ribonuclease Z [Staphylococcus aureus A8796] gi|41017526|sp|P60196|RNZ_STAAM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41017527|sp|P60197|RNZ_STAAN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991504|sp|A7X2M2|RNZ_STAA1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189043791|sp|A6U1X3|RNZ_STAA2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189043792|sp|A5IT32|RNZ_STAA9 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|13701303|dbj|BAB42597.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247275|dbj|BAB57666.1| similar to metallo-beta-lactamase, AtsA/ElaC family [Staphylococcus aureus subsp. aureus Mu50] gi|147741057|gb|ABQ49355.1| RNAse Z [Staphylococcus aureus subsp. aureus JH9] gi|149946505|gb|ABR52441.1| ribonuclease Z [Staphylococcus aureus subsp. aureus JH1] gi|156721958|dbj|BAF78375.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257787553|gb|EEV25893.1| ribonuclease Z [Staphylococcus aureus A9781] gi|257840269|gb|EEV64733.1| ribonuclease Z [Staphylococcus aureus A9763] gi|257844102|gb|EEV68490.1| ribonuclease Z [Staphylococcus aureus A9719] gi|257848540|gb|EEV72528.1| ribonuclease Z [Staphylococcus aureus A9299] gi|257850946|gb|EEV74889.1| ribonuclease Z [Staphylococcus aureus A8115] gi|257854322|gb|EEV77271.1| ribonuclease Z [Staphylococcus aureus A6300] gi|257857940|gb|EEV80829.1| ribonuclease Z [Staphylococcus aureus A6224] gi|257863557|gb|EEV86315.1| ribonuclease Z [Staphylococcus aureus A5937] gi|262075421|gb|ACY11394.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus ED98] gi|282589381|gb|EFB94472.1| ribonuclease Z [Staphylococcus aureus A10102] gi|282764321|gb|EFC04447.1| ribonuclease Z [Staphylococcus aureus A8117] gi|285817185|gb|ADC37672.1| Ribonuclease Z [Staphylococcus aureus 04-02981] gi|294968371|gb|EFG44395.1| ribonuclease Z [Staphylococcus aureus A8819] gi|297177443|gb|EFH36695.1| ribonuclease Z [Staphylococcus aureus A8796] gi|312829893|emb|CBX34735.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129777|gb|EFT85767.1| hypothetical protein CGSSa03_01788 [Staphylococcus aureus subsp. aureus CGS03] gi|329727372|gb|EGG63828.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 21172] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|283470783|emb|CAQ49994.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ST398] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPIVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|57650460|ref|YP_186389.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus COL] gi|87159998|ref|YP_494149.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195309|ref|YP_500113.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221623|ref|YP_001332445.1| hypothetical protein NWMN_1411 [Staphylococcus aureus subsp. aureus str. Newman] gi|161509732|ref|YP_001575391.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140075|ref|ZP_03564568.1| ribonuclease Z [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732147|ref|ZP_04866312.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|258451162|ref|ZP_05699197.1| ribonuclease Z [Staphylococcus aureus A5948] gi|262049091|ref|ZP_06021968.1| hypothetical protein SAD30_0248 [Staphylococcus aureus D30] gi|262051174|ref|ZP_06023398.1| hypothetical protein SA930_1605 [Staphylococcus aureus 930918-3] gi|282924753|ref|ZP_06332420.1| ribonuclease Z [Staphylococcus aureus A9765] gi|284024564|ref|ZP_06378962.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 132] gi|294848534|ref|ZP_06789280.1| ribonuclease Z [Staphylococcus aureus A9754] gi|304380909|ref|ZP_07363569.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|76363381|sp|Q5HFR8|RNZ_STAAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|122539452|sp|Q2FY67|RNZ_STAA8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123485735|sp|Q2FGM9|RNZ_STAA3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|172048896|sp|A6QH51|RNZ_STAAE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189043793|sp|A8Z2D7|RNZ_STAAT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|57284646|gb|AAW36740.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus COL] gi|87125972|gb|ABD20486.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202867|gb|ABD30677.1| AtsA/ElaC family protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374423|dbj|BAF67683.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368541|gb|ABX29512.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724102|gb|EES92831.1| ribonuclease Z [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257861217|gb|EEV84030.1| ribonuclease Z [Staphylococcus aureus A5948] gi|259160811|gb|EEW45831.1| hypothetical protein SA930_1605 [Staphylococcus aureus 930918-3] gi|259162760|gb|EEW47325.1| hypothetical protein SAD30_0248 [Staphylococcus aureus D30] gi|269940996|emb|CBI49380.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TW20] gi|282592760|gb|EFB97766.1| ribonuclease Z [Staphylococcus aureus A9765] gi|294824560|gb|EFG40983.1| ribonuclease Z [Staphylococcus aureus A9754] gi|302333176|gb|ADL23369.1| metallo-beta-lactamase, AtsA/ElaC family [Staphylococcus aureus subsp. aureus JKD6159] gi|302751335|gb|ADL65512.1| metallo-beta-lactamase, AtsA/ElaC family [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340636|gb|EFM06570.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315198805|gb|EFU29133.1| ribonuclease Z [Staphylococcus aureus subsp. aureus CGS01] gi|320140612|gb|EFW32466.1| ribonuclease Z [Staphylococcus aureus subsp. aureus MRSA131] gi|320144148|gb|EFW35917.1| ribonuclease Z [Staphylococcus aureus subsp. aureus MRSA177] gi|329314182|gb|AEB88595.1| Ribonuclease Z [Staphylococcus aureus subsp. aureus T0131] gi|329725275|gb|EGG61762.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 21189] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|311277401|ref|YP_003939632.1| hypothetical protein Entcl_0070 [Enterobacter cloacae SCF1] gi|308746596|gb|ADO46348.1| hypothetical protein Entcl_0070 [Enterobacter cloacae SCF1] Length = 316 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 73/222 (32%), Gaps = 30/222 (13%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ ++ + TH H DH+ + + GYFL+QK ID Sbjct: 60 GKSAILIDAGGGIFLRFGQSGARLENLKLIGITHFHTDHVSDLAAILKGGYFLQQKEVID 119 Query: 108 VYAA--PDCMKHLFESFRYCFKALDD-RTYPPIV-----------NPIVIENNDVPICMK 153 + + + F FK +Y + I+ + Sbjct: 120 LAGPMGGGAFPSMTQYFHDLFKKEGGAYSYLNGLYNATDGLQLESRVKDIDYTAKEPQLV 179 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 ++ + HG + L FR G + D N + + D L++ L Sbjct: 180 YQDPEMKVTALGIPHGDVPCLAFRIETAKGTMVISADQNGSNEAFVNFAKGADILVMP-L 238 Query: 210 KNGLHSS------HFSLSESLKKIELINPKNAILTH-MHVDL 244 H+ H K INPK +L H M L Sbjct: 239 AIDEHADTASKFLHAEPEAVGKIAAEINPKVLVLNHFMGKGL 280 >gi|297198823|ref|ZP_06916220.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|197711259|gb|EDY55293.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 251 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 83/257 (32%), Gaps = 44/257 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG + P S + RG V VD GP Sbjct: 4 LSLTVLGTASPH--PAPG---------------RPCSGYL----LRGGGAEVWVDAGPGT 42 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCMKHLF 119 + ++ R + A+ +H HADH + F PI VYA P C L Sbjct: 43 FAELQRHTDPSRLTAIWISHLHADHSADLLSAVYAFAFGGLTPPAPIPVYAPPGCAHRLA 102 Query: 120 ESFRYCFKALDDR--TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRISSLGF 176 F D + P+ + + + ++ + ++ EA + + GR+ Sbjct: 103 GFFGQSDVRFLDGILAFHPLYDGHEVRHWNLRLAARAVAHDTEAYGLRAECAGRV----- 157 Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HFSLSESLKKIELINP 232 +AY D + A +E D + +A H H + ++ Sbjct: 158 ----LAYSGD-SGPCAALVELAVESDVFLCEA-DIDRHREGEQVHLTPEDAGDIARKAGA 211 Query: 233 KNAILTHMHVDLDYDMV 249 + I+TH+ L + Sbjct: 212 RELIVTHVGPTLTREAA 228 >gi|225551828|ref|ZP_03772771.1| ribonuclease Z [Borrelia sp. SV1] gi|225371623|gb|EEH01050.1| ribonuclease Z [Borrelia sp. SV1] Length = 319 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 99/334 (29%), Gaps = 95/334 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADH-----------------------IHGIDGLRGYF 99 M + ++++ I + TH HADH I G G++ Y Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKTYT 101 Query: 100 LKQKRPIDVYAA-------------------------PDC-MKHLFESFRYCFKALDDRT 133 + +Y +KH E Y F D Sbjct: 102 QANINMLKIYKNYEIIYKEIIIDKTEKIIYEDKTKKIEYTKLKHSIECVGYLFIEKDK-- 159 Query: 134 YPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P N E ++P G I + + I + VAY TD Sbjct: 160 -PGKFNTEKAEELNIPKGPIRKALQDGKEILVNGKIIKPSEILGKSKKGLKVAYITDTGY 218 Query: 190 FPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH-- 241 F E +++++N + +II++ LK H + E+ ++ L H Sbjct: 219 F-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGEAANIVKQAKVLQTGLIHFSER 277 Query: 242 ----VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 DL+ P + DGM+ + Sbjct: 278 YTLRKDLENLLKEAKLEYPDGEIFLTRDGMRLEA 311 >gi|323450278|gb|EGB06160.1| hypothetical protein AURANDRAFT_72053 [Aureococcus anophagefferens] Length = 1445 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 21/121 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 LG S G P + R+ S++ + + +T + D G Sbjct: 284 SGMELVFLGT--SAGGPTLA--------------RSASAVALRLGAHAKRGSTWLFDCGE 327 Query: 63 DFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFL---KQKRPIDVYAAPDCMKH 117 Y Q+L V +D + +H H DH+ G+ G+ L + +R + VY ++ Sbjct: 328 GTYRQLLATPVSHAAVDRIFVSHLHGDHLWGLPGVVVSALLEQRGRRHLHVYGPEGLHEY 387 Query: 118 L 118 L Sbjct: 388 L 388 >gi|218289402|ref|ZP_03493636.1| ribonuclease Z [Alicyclobacillus acidocaldarius LAA1] gi|218240508|gb|EED07689.1| ribonuclease Z [Alicyclobacillus acidocaldarius LAA1] Length = 313 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 94/325 (28%), Gaps = 80/325 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G P RR + I+ R +T + D G Sbjct: 1 MELIFLGTGA--GAPS---------------RRRNVTA-IALRLTRDDSTVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 ++ +D V TH H DHI G+ GL R + P+ +Y P + Sbjct: 43 QHRMFDAPFGPNRVDRVFITHLHGDHIFGLPGLLSTRSFPENVG-PLRLYGPPGIRAFVR 101 Query: 120 ESFR-------Y--CFKALDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPIL--QQ 167 + Y F+ P+ + + + S G +E P Sbjct: 102 AAIDVSQTHLSYEIQFREWTSPEPAPVHEGLYTVRAALLDHAIPSYGYRVEEAPFPGRLH 161 Query: 168 HGRISSLG---------FRFGNVAYCTDVNAF-------PAE----------------SL 195 R+ + G + G D PAE ++ Sbjct: 162 ADRLRAEGLQPSPLWAQLKAGEDVTLPDGRRLRAADFVDPAEPGRVIAILGDTRPCKAAV 221 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 E + D L+ +A H+ H + ++ + K ILTH+ + Sbjct: 222 ELARGADCLVHEATFLDRHAHLASAFFHSTARQAAEIAREAEAKCLILTHVSARYERAEE 281 Query: 250 LKSTPS------RVVPAFDGMQFSS 268 + + A DGM + Sbjct: 282 DEILAEARAVFPNTLLAHDGMVYEI 306 >gi|291614746|ref|YP_003524903.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] gi|291584858|gb|ADE12516.1| beta-lactamase domain protein [Sideroxydans lithotrophicus ES-1] Length = 254 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 69/220 (31%), Gaps = 52/220 (23%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + L Q + ++ TH H DHI G+ L +K + Sbjct: 20 GQTRILLDCGFSLSETVSRLARLGLQAEQLQGIVVTHEHGDHISGVSRLA-----RKFGL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ ++ +F + ++ + + G ++ P Sbjct: 75 PVWLTHGTLRTQSAAFA------------------GLSITEISPHSRFSIGEVQVQPYPV 116 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + F + + TD + E L L+++ L G + Sbjct: 117 PHDAAEPVQYVFSDGTRRLGVLTDTGSATPHIEETLSGCHALVLECNHDAGMLAEGDYPY 176 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHV 242 H + +++ + + ++ + H+ Sbjct: 177 SLKQRVGGRFGHLNNADAAALLGRLDNSRLQHIVAAHLSH 216 >gi|239941047|ref|ZP_04692984.1| ribonuclease Z [Streptomyces roseosporus NRRL 15998] gi|239987526|ref|ZP_04708190.1| ribonuclease Z [Streptomyces roseosporus NRRL 11379] gi|291444487|ref|ZP_06583877.1| ribonuclease Z [Streptomyces roseosporus NRRL 15998] gi|291347434|gb|EFE74338.1| ribonuclease Z [Streptomyces roseosporus NRRL 15998] Length = 303 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 88/288 (30%), Gaps = 70/288 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q+LR V I + TH H DH G+ G+ + P V A P +H Sbjct: 39 GEGTQRQMLRAGVAAHDIHRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQH 98 Query: 118 LFESFRYCFKALD-----------DRTYPPIVNPIVIENNDVPICMKSAGGVIE------ 160 F+ RY + D +++ + ++S G + Sbjct: 99 FFDRLRYATAYRETVELTQAPVAGDGGILATTPAYTLDSRKLSHPVESYGYRLTEPDTRR 158 Query: 161 -AIPILQQHG----------RISSLGF----------RFGNVAYCTDVNAFPAESLEKLQ 199 +L++HG R SLG R A+ D + Sbjct: 159 MLPALLKEHGIAGPDVGRLQREGSLGDVTLEQVSEHRRGQRFAFVMDT-RLCDGVYALAE 217 Query: 200 NLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ K + H + ++ + + ++ +LTH Sbjct: 218 GCDMLVIESTFLDEDEKLAVDHGHLTAGQAARVAKEAGVRHLVLTHFS 265 >gi|38674604|gb|AAR26319.1| TaR3 [Myxococcus xanthus] Length = 277 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 61/225 (27%), Gaps = 44/225 (19%) Query: 53 NTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---I 106 +I+D G ++RE + ++H H DH+ G +F P + Sbjct: 32 GHRLILDAGTGIRALGEIMMREGAPQEATLFFSHLHWDHVQGF----PFFTPAWLPTSEL 87 Query: 107 DVYAA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y L P ++ G Sbjct: 88 TLYGPGANGAQALQSELAAQM-----QPLHFPVPLSTMRSRMDFRSALHARPVEVGPFRV 142 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVN----AFPAESLEKLQNLDFLIIDALKNGL 213 PI H + L +R + Y TDV E + D L +DA + Sbjct: 143 TPIDVPHPQ-GCLAYRLEADGHSFVYATDVEVRVQELAPEVGRLFEGADVLCLDA-QYTP 200 Query: 214 HS------------SHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H ++ ++ L+ + L H D + Sbjct: 201 DEYEGRKGVAKKGWGHSTMMDAAGVAGLVGARRLCL--FHHDPAH 243 >gi|49483754|ref|YP_040978.1| hypothetical protein SAR1581 [Staphylococcus aureus subsp. aureus MRSA252] gi|82751097|ref|YP_416838.1| metallo-beta-lactamase [Staphylococcus aureus RF122] gi|257425627|ref|ZP_05602051.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 55/2053] gi|257428288|ref|ZP_05604686.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 65-1322] gi|257430925|ref|ZP_05607305.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 68-397] gi|257433614|ref|ZP_05609972.1| ribonuclease Z [Staphylococcus aureus subsp. aureus E1410] gi|257436527|ref|ZP_05612571.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M876] gi|258423158|ref|ZP_05686051.1| ribonuclease Z [Staphylococcus aureus A9635] gi|282904084|ref|ZP_06311972.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C160] gi|282905911|ref|ZP_06313766.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282908821|ref|ZP_06316639.1| ribonuclease Z [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911140|ref|ZP_06318942.1| ribonuclease Z [Staphylococcus aureus subsp. aureus WBG10049] gi|282914309|ref|ZP_06322095.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M899] gi|282916770|ref|ZP_06324528.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282919278|ref|ZP_06327013.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282924603|ref|ZP_06332271.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|283770575|ref|ZP_06343467.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283958266|ref|ZP_06375717.1| ribonuclease Z [Staphylococcus aureus subsp. aureus A017934/97] gi|293503386|ref|ZP_06667233.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|293510401|ref|ZP_06669107.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M809] gi|293530940|ref|ZP_06671622.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M1015] gi|295428080|ref|ZP_06820712.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590952|ref|ZP_06949590.1| ribonuclease Z [Staphylococcus aureus subsp. aureus MN8] gi|56749415|sp|Q6GGJ4|RNZ_STAAR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123549237|sp|Q2YYA2|RNZ_STAAB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|49241883|emb|CAG40576.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|82656628|emb|CAI81054.1| probable metallo-beta-lactamase [Staphylococcus aureus RF122] gi|257271321|gb|EEV03467.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 55/2053] gi|257275129|gb|EEV06616.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 65-1322] gi|257278355|gb|EEV08991.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 68-397] gi|257281707|gb|EEV11844.1| ribonuclease Z [Staphylococcus aureus subsp. aureus E1410] gi|257283878|gb|EEV14001.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M876] gi|257846608|gb|EEV70629.1| ribonuclease Z [Staphylococcus aureus A9635] gi|282313438|gb|EFB43833.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C101] gi|282317088|gb|EFB47462.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C427] gi|282319257|gb|EFB49609.1| ribonuclease Z [Staphylococcus aureus subsp. aureus D139] gi|282321490|gb|EFB51815.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M899] gi|282324835|gb|EFB55145.1| ribonuclease Z [Staphylococcus aureus subsp. aureus WBG10049] gi|282327085|gb|EFB57380.1| ribonuclease Z [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331203|gb|EFB60717.1| ribonuclease Z [Staphylococcus aureus subsp. aureus Btn1260] gi|282595702|gb|EFC00666.1| ribonuclease Z [Staphylococcus aureus subsp. aureus C160] gi|283460722|gb|EFC07812.1| ribonuclease Z [Staphylococcus aureus subsp. aureus H19] gi|283790415|gb|EFC29232.1| ribonuclease Z [Staphylococcus aureus subsp. aureus A017934/97] gi|290920208|gb|EFD97274.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M1015] gi|291095052|gb|EFE25317.1| ribonuclease Z [Staphylococcus aureus subsp. aureus 58-424] gi|291466765|gb|EFF09285.1| ribonuclease Z [Staphylococcus aureus subsp. aureus M809] gi|295128438|gb|EFG58072.1| ribonuclease Z [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575838|gb|EFH94554.1| ribonuclease Z [Staphylococcus aureus subsp. aureus MN8] gi|298694788|gb|ADI98010.1| probable metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ED133] gi|312438028|gb|ADQ77099.1| ribonuclease Z [Staphylococcus aureus subsp. aureus TCH60] gi|315195401|gb|EFU25788.1| probable metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS00] gi|323439494|gb|EGA97215.1| metallo-beta-lactamase [Staphylococcus aureus O11] gi|323441538|gb|EGA99189.1| metallo-beta-lactamase [Staphylococcus aureus O46] Length = 306 Score = 59.4 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + I + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPIVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|168229680|ref|ZP_02654738.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472134|ref|ZP_03078118.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458498|gb|EDX47337.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335962|gb|EDZ22726.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 305 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 85/317 (26%), Gaps = 77/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 S---------FRY-------------------CFK---ALDDRTY-------PPIVNPIV 142 + F F+ L+ Y P +N Sbjct: 104 TLRLSGSWTDFPMQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKPGALNARA 163 Query: 143 IENNDVP----ICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVAYCTDVNAFPAESLEK 197 ++ V AG + Q +G + +VA D +L Sbjct: 164 LKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPC-KAALAL 222 Query: 198 LQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 Q +D ++ +DA ++ H S ++ I+TH+ D + Sbjct: 223 AQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHISSRYDDKGCQR 282 Query: 252 STPS------RVVPAFD 262 A+D Sbjct: 283 LLAECRAIFPATELAYD 299 >gi|188535435|ref|YP_001909232.1| ribonuclease Z [Erwinia tasmaniensis Et1/99] gi|254808637|sp|B2VHF1|RNZ_ERWT9 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|188030477|emb|CAO98371.1| Ribonuclease Z [Erwinia tasmaniensis Et1/99] Length = 304 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 33/181 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG GA G P R +S+ + R N T + D G Sbjct: 1 MHLQFLGTGA--GTPS--------------RERNVTSIALDLHGVR--NATWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+LR + I+ + TH H DH+ G+ GL P+ +Y + Sbjct: 43 QHQILRTPIKPGRIEKIFITHLHGDHLFGLPGLLTSRSMNGCVEPMTLYGPAG-----IK 97 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F +L + I I +V + A + A P+ + G+R Sbjct: 98 TFVETSLSLSGSWLTFPLEIIEISAGEV---FQDAHFRVTAYPLTHP---VECYGYRIDE 151 Query: 181 V 181 + Sbjct: 152 L 152 >gi|261340662|ref|ZP_05968520.1| ribonuclease Z [Enterobacter cancerogenus ATCC 35316] gi|288317076|gb|EFC56014.1| ribonuclease Z [Enterobacter cancerogenus ATCC 35316] Length = 305 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 87/315 (27%), Gaps = 93/315 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP T +N +++ + + D G Sbjct: 1 MELIFLGT--SAGVP-----------TRSRNV---TAILLDLQHPTRGGL-WLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L +D + TH H DH+ G+ GL P+ +Y + + Sbjct: 44 QHQLLHTPYHPGKLDKIFITHLHGDHLFGLPGLLCSRSMAGIASPLTIYGPAGVREFVDT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R D YP +E ++ + GV + H I+ G+R Sbjct: 104 ALRLSGSWTD---YP-------LEIVEIAEGLIFDDGVYKVTATALNH-PITCYGYRIEE 152 Query: 179 ------------------------------------GNVA----YCT------------D 186 G + Y + D Sbjct: 153 HDKPGALNAAALLADGVKPGPLFQRLKQGETVTLDDGRIVNGQHYLSAPLPGKKLAIFGD 212 Query: 187 VNAFPAESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHM 240 P +L Q +D ++ ++A +S H S ++ + I+TH+ Sbjct: 213 TAPCP-SALHLAQGVDVMVHEATLEAAMEEKANSRGHSSTRQAARLAREAGVGKLIITHV 271 Query: 241 HVDLDYDMVLKSTPS 255 D + Sbjct: 272 SSRYDAHGCERLLAE 286 >gi|325963080|ref|YP_004240986.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] gi|323469167|gb|ADX72852.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] Length = 306 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 73/228 (32%), Gaps = 40/228 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-- 107 ++ +VD G D Q++ + I V TH H DH G+ GL + + P+ Sbjct: 40 NDAVYLVDCGLDASRQLVNAGLGFAGIRNVFITHHHLDHTSGLPGLLLHGWAARPPLPAV 99 Query: 108 -VYAAPDCMK---HLFESFRY---CFKALDDRTYPPIVNPIVIE-NNDVPICMKSAGGVI 159 ++ P K +L F F++ + +E D I + Sbjct: 100 NIWGPPGTKKKATNLLAGFADEIALFESGGGFGAFTAPDGHDVEVPLDGSITPVMEDDNV 159 Query: 160 EAIPILQQHGRI--SSLGFRF-----GNVA-YCTDVNAFPAESLEKLQNLDFLIIDA--- 208 HG ++ +RF G VA + D A A + D LI + Sbjct: 160 RVDATRVFHGPEVANAYAYRFTVKSTGKVAVFSGDTAAHDANLAAIARGCDVLIHETQDN 219 Query: 209 -----------------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 LK L +H S+ + K + +H Sbjct: 220 SAIERIAAGLPHSRGEELKKHLFEAHSSVLDLPAVALAAQAKKLVFSH 267 >gi|310821914|ref|YP_003954272.1| hypothetical protein STAUR_4665 [Stigmatella aurantiaca DW4/3-1] gi|309394986|gb|ADO72445.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 246 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 70/215 (32%), Gaps = 26/215 (12%) Query: 51 GSNTTVIV-DTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQKRPI 106 G +++ D G + L Q ++ A + +H H DH+ G+ F+ Q Sbjct: 2 GVGDELLIFDLGTGARPLGEHLVAQAKAVQASIFLSHYHYDHLQGLPFFTPIFMPQ-NAF 60 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y +P + L E V ++ +DV + G + Sbjct: 61 TFYGSPRNGQCLKEILSGQMTQPYFPVTAEGVFRAQLDYHDVHAGERVTVGSASISTLEL 120 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAES---LEKLQNLDFLIID--------ALKN 211 H +LG+R +V Y TD+ + D LI D ++ Sbjct: 121 NHPG-GNLGYRVECDGRSVVYATDIEQSEEGDARFFAFAKGADLLIYDSMYTEDEYCGRH 179 Query: 212 GLHSS---HFSLSESLKKIELINPKNAILTHMHVD 243 G + H + +++ K +L H D Sbjct: 180 GPARTGWGHSTWQAAVRAANESQAKTLVL--FHHD 212 >gi|194477150|ref|YP_002049329.1| Ribonuclease Z [Paulinella chromatophora] gi|171192157|gb|ACB43119.1| Ribonuclease Z [Paulinella chromatophora] Length = 319 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 83/309 (26%), Gaps = 106/309 (34%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP R SS+ + + D G Sbjct: 1 MQVTFLGT--SSGVPTRG--------------RNVSSVALRLPQRSEL---WLFDCGEAT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+LR ++ + + TH H DHI G+ GL +++Y +L Sbjct: 42 QHQILRSELRISQLRRIFITHMHGDHIFGLPGLLASLGLAGNCEGVELYGPDLLRDYLEG 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + R + YP ++ + N+ I + ++ + R+ + +R Sbjct: 102 TLR---TSSTRIGYPLRIHRVRCAANNSAILVDDKDLLVRCTALNH---RVPAYAYRIEQ 155 Query: 179 ----GNV--------------AY----------------------------------CTD 186 G AY CTD Sbjct: 156 KPRAGRFNIEQARSLGIPPGPAYGHLKAGREIVLQDGRIIKGKTLCGPDKPGCCIVYCTD 215 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNGLHSS--------------HFSLSESLKKIELINP 232 F ++ + D LI H S H + + + Sbjct: 216 TV-FSEAAVNLSRGADLLI--------HESTFSHREAEMAYKRQHSTSMMAAQTAAEAGV 266 Query: 233 KNAILTHMH 241 ILTH+ Sbjct: 267 GQLILTHLS 275 >gi|298243555|ref|ZP_06967362.1| beta-lactamase superfamily hydrolase [Ktedonobacter racemifer DSM 44963] gi|297556609|gb|EFH90473.1| beta-lactamase superfamily hydrolase [Ktedonobacter racemifer DSM 44963] Length = 329 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 76/261 (29%), Gaps = 77/261 (29%) Query: 51 GSNTTVIVDTGPDFY-MQV----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G T ++VD G +Q L + + VL TH H+DH+ + L ++ Sbjct: 22 GGRTRLLVDAGLGVRVLQARLRSLGVDLSQLRGVLVTHEHSDHVLALPSLL-----RRYQ 76 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV----------------- 148 + V + + + A + +V+P E + V Sbjct: 77 VPVITNEETFAAIEQGL--AAGAWRSDSGKLVVSPTEAEGDVVIQEQSETTLVQEQSGVE 134 Query: 149 -----------------------PICMKSAGGVIEAIPILQQHGRISSLGFRFG----NV 181 P +A G IE H ++ G+ + Sbjct: 135 IVTRIQESTLVYRPVNNVPALILPTGKTTAVGDIEVTSFPILHDAVAPCGYLLSVGGCRL 194 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESL 224 TD +E L + D L++++ L G + H S ++ Sbjct: 195 CVVTDTGEVTSEMLSMMAQADLLVLESNHDRQRLLRGPYPQRLKQRIISSKGHLSNDQAA 254 Query: 225 KKIEL-INP---KNAILTHMH 241 + P + L H+ Sbjct: 255 NAVLKTWRPDSIRWLWLGHLS 275 >gi|254479254|ref|ZP_05092598.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] gi|214034823|gb|EEB75553.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] Length = 217 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 78/225 (34%), Gaps = 27/225 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQK-- 103 +T +++D G + R + + V+ +H H+DH+ + LR + Sbjct: 2 EDEDTHILLDCGSGVISRYQRYYDLNELKHVILSHLHSDHMSDMLVLRYALDILRARGTV 61 Query: 104 -RPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 P++VY L E F+ FK I V+ ++ I K +E Sbjct: 62 NGPVNVYCPATPENVLEELKFKDVFKIH------TINEETVLNIGEIEISFKKMNHPVET 115 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSL 220 + + G Y D + E + + D L+ D G+ H + Sbjct: 116 YAVKMKKGDKI--------FVYSADTV-YTEELIALAEGADLLLCDGNFLTGMQGPHMTA 166 Query: 221 SESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 +E+ + + K ILTH+ + DY K A D Sbjct: 167 AEAAEIAKKAGCKKLILTHLSPLISIKDYYDEAKKVFENTEIARD 211 >gi|219849178|ref|YP_002463611.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543437|gb|ACL25175.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 302 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 84/285 (29%), Gaps = 76/285 (26%) Query: 45 SRVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + V +I+D G + Q + ID +L TH H DHI G F Sbjct: 27 TCVEVEAEERHIILDAGTGLRLLGDSLQRQHATLHHID-LLITHTHWDHIIGFPFFAPLF 85 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--- 156 + +D+Y L + + P+ +++ I G Sbjct: 86 DPNLK-LDIYGLARTQSSLRTTLAGALSDP--------LLPLTMDDLRAQINFFEIGAGH 136 Query: 157 ----GVIEAIPILQQHGRISSLGFRF----GNVAYCTDV--------------------- 187 G ++ L H +L +R G + + D Sbjct: 137 CFELGPVQVRTALANH-PYRALAYRLETPDGVLTFIPDTGPFHTVLFGEERIEWTGQPTA 195 Query: 188 ---------NAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINP 232 A A +E D+LI DA H H S S++ + E Sbjct: 196 RSQSDLRELAAMKAAIIELAYESDWLIYDAQFTDAQYARFPHWGHSSASQAREIAEEARV 255 Query: 233 KNAILTHMHVDLDY--DMVLKSTPSR---------VVPAFDGMQF 266 + IL H D + + + + V AF+GM+ Sbjct: 256 RQLIL--FHHDPHRTDEELDRIVSEQQAMAAPGLLVTAAFEGMEL 298 >gi|58337247|ref|YP_193832.1| metallo-beta-lactamase superfamily [Lactobacillus acidophilus NCFM] gi|227903832|ref|ZP_04021637.1| ribonuclease Z [Lactobacillus acidophilus ATCC 4796] gi|75432945|sp|Q5FKH3|RNZ_LACAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|58254564|gb|AAV42801.1| putative metallo-beta-lactamase superfamily [Lactobacillus acidophilus NCFM] gi|227868719|gb|EEJ76140.1| ribonuclease Z [Lactobacillus acidophilus ATCC 4796] Length = 312 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + P+ +Y + Sbjct: 43 QHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEDFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP +E ++ + + G + H RI S GFR Sbjct: 102 ISLK---VSRTKISYP----IHYVELSEPGLICEDRG--FKVYTDRLDH-RIPSFGFRV 150 >gi|331269418|ref|YP_004395910.1| metallo beta-lactamase superfamily hydrolase [Clostridium botulinum BKT015925] gi|329125968|gb|AEB75913.1| Metallo beta-lactamase superfamily hydrolase [Clostridium botulinum BKT015925] Length = 430 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 74/209 (35%), Gaps = 33/209 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ----VLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D GP+ +R + +D V+ THPH DHI G+D + Sbjct: 125 SILIQQ-----DEHNMLIDAGPNAAENTVVNYIRSLGIKRLDYVIGTHPHEDHIGGLDKV 179 Query: 96 RGYFLKQKRPID-------VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 F + + Y D + + + TY V I Sbjct: 180 IDSFKIGQVLMPNKISTTGTY--KDVITSIKNKNLKITSPVPGTTYKLGVAEWSIFAPVK 237 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 +S + + L F + + D A +E ++ L D Sbjct: 238 DKDYESVN----------NYSIVQKLKFGNTSFVFTGDAEAVSE--MEMIKGGYALQADV 285 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S ++ ++ +NPK A++ Sbjct: 286 LKIGHHGSKTSTCQA--FLDKVNPKYALI 312 >gi|293415562|ref|ZP_06658205.1| ribonuclease Z [Escherichia coli B185] gi|291433210|gb|EFF06189.1| ribonuclease Z [Escherichia coli B185] Length = 311 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 107 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 164 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 165 LNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 222 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 223 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 277 Query: 241 HVDLD 245 D Sbjct: 278 SSRYD 282 >gi|255657607|ref|ZP_05403016.1| putative metallo-beta-lactamase superfamily protein [Clostridium difficile QCD-23m63] gi|296452713|ref|ZP_06894403.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP08] gi|296880034|ref|ZP_06904004.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP07] gi|296258403|gb|EFH05308.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP08] gi|296429011|gb|EFH14888.1| beta-lactamase superfamily I metal-dependent hydrolase [Clostridium difficile NAP07] Length = 265 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 89/278 (32%), Gaps = 70/278 (25%) Query: 11 GCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR 70 G G+S G C KN +++ + TT + D G D Sbjct: 8 GSGSS----------GNCHYIGYKN----TNILVDAGLSGKRITTGLKDIGID------- 46 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + + TH H DHI G L +K I V+A + + Sbjct: 47 --ADKLKGIFITHEHVDHIKG-----AGILSRKFDIPVFANIKTWCSMKDKLGDIKDK-- 97 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GNVAYCT 185 N V EN+ + G I P +H +G+ F ++ T Sbjct: 98 --------NMKVFENDK-----TYSLGDIIVRPFSIEHDASDPVGYNFYTENDEKMSIAT 144 Query: 186 DVNAFPAESLEKLQNLDFLIID---------------ALKNG--LHSSHFSLSES----L 224 D+ + L ++++ ALK ++ H S ++ + Sbjct: 145 DIGCITQNIKKHLYKSKLVVLESNYDPNMLMMGSYTYALKKRVMSNAGHLSNEDAANFCV 204 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 + I ++ +L H+ + ++ + T V+ + D Sbjct: 205 ELINE-GTESILLAHLSKENNFPELAYETSKGVLASND 241 >gi|307316444|ref|ZP_07595887.1| coenzyme PQQ biosynthesis protein B [Sinorhizobium meliloti AK83] gi|306897642|gb|EFN28385.1| coenzyme PQQ biosynthesis protein B [Sinorhizobium meliloti AK83] Length = 303 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 95/316 (30%), Gaps = 65/316 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVI 57 +LG A G+P+ C DP + +T+SSL +S E + Sbjct: 4 TSDLRIIVLGAAAGGGLPQWNCGCRNCAMARDPASGLRPQTQSSLAVSLDGESWTIFN-- 61 Query: 58 VDTGPDFYMQVL--------REQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI 106 PD QV R + I++V+ T+ DH+ G+ LR + L + Sbjct: 62 --ASPDIRQQVQDNCPLQPRRLRHSPIESVVLTNGDIDHLAGLLVLREKQAFTLFSTGAV 119 Query: 107 -------DVY--AAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIENNDVPICMK 153 V+ P+ + F L P P+ +E+ + + ++ Sbjct: 120 GRIVSDNPVFQVLDPELVSRKTIEIDEAFSPLSGLDARLFAVPGKVPLFLEDGEPDLGIE 179 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 G R V Y +L++ D + D Sbjct: 180 G----------EHTVGLELEAAGR--RVYYVPGCAMMTDSLAARLRDADAVFFDGTLFSD 227 Query: 210 ----------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMV----LKS 252 K G H + SL ++L+N + I H++ + Sbjct: 228 DEMILTGTGRKTGRRMGHMPIDGEGGSLDALDLLNIRRKIYVHINNTNPIWRAGSERERV 287 Query: 253 TPSRVVPAFDGMQFSS 268 +DGM+ Sbjct: 288 EARGFEIGYDGMEVRL 303 >gi|240168796|ref|ZP_04747455.1| ribonuclease Z [Mycobacterium kansasii ATCC 12478] Length = 297 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 74/282 (26%), Gaps = 76/282 (26%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 G S VP T +N R ++ D G Q+L Sbjct: 3 GTSSQVP-----------TRHRNHNG--------YLLRWDEERLLFDPGEGTQRQMLFAG 43 Query: 73 VL--SIDAVLYTHPHADHIHG---------IDG-------------LRGYFLKQKRPI-- 106 V ++ + TH H DH G +D + + I Sbjct: 44 VPLTAVTRLCITHFHGDHCLGVPGVVQRLSLDDAQHRVHAYFPASGRQFFARLHHACIFH 103 Query: 107 --------DVYAAPDC------------MKHLFESFRYCFKALDDRTYPP-IVNPIVIEN 145 V A + H ++ Y D R + P ++ I Sbjct: 104 DRANVHAEPVAADGPVATGAFGVLEARKLDHSVDAIGYRLIEPDGRRFVPELLARFGIAG 163 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 V ++ I+ + S R A+ D + +D L+ Sbjct: 164 PAVGELHRAGSVQIDGRTVDL---SEVSEARRGQRFAFVMDT-RLCDAVYALAEGVDLLV 219 Query: 206 IDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 I+A H H + ++ + + +LTH Sbjct: 220 IEATFLSEDSDLAAHYGHLTARQAARVAAECGVRRLVLTHFS 261 >gi|148653605|ref|YP_001280698.1| ribonuclease Z [Psychrobacter sp. PRwf-1] gi|148572689|gb|ABQ94748.1| RNAse Z [Psychrobacter sp. PRwf-1] Length = 354 Score = 59.4 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 43/199 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNT---------T 55 FT LG S G+P +R ++L I ++ +N+ Sbjct: 2 LQFTFLGT--SAGIPT--------------KKRNVTALAIECLNPYAANSAQQSGSKKPW 45 Query: 56 VIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA 111 V++D G Q+L + V + A+ TH H DH +G+ GL R P+ + A Sbjct: 46 VLIDCGEATQHQLLHTKLSVRHLAAICITHVHGDHCYGLPGLLASMAMSGRTAPLTLIAP 105 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN--------DVPICMKSAGGVIEAIP 163 + + ++ D P ++ + IE+ + I SA +E Sbjct: 106 KAILTLIQ-----AVQSTTDLYLPYDIDFVAIEDKVCADQSIANPVILQLSAAHKLEIKI 160 Query: 164 ILQQHGRISSLGFRFGNVA 182 + H R++S GF V Sbjct: 161 VKLSH-RVASYGFVITQVV 178 >gi|331673779|ref|ZP_08374542.1| ribonuclease Z [Escherichia coli TA280] gi|331069052|gb|EGI40444.1| ribonuclease Z [Escherichia coli TA280] Length = 311 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 84/296 (28%), Gaps = 75/296 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEIFDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 167 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAESL 195 ++ VP AG I Q +G G +A D + +L Sbjct: 168 QALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTSPC-DAAL 226 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + + +D ++ +A H S ++ I+TH+ D Sbjct: 227 DLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD 282 >gi|221198398|ref|ZP_03571444.1| beta-lactamase domain protein [Burkholderia multivorans CGD2M] gi|221208925|ref|ZP_03581922.1| beta-lactamase domain protein [Burkholderia multivorans CGD2] gi|221171208|gb|EEE03658.1| beta-lactamase domain protein [Burkholderia multivorans CGD2] gi|221182330|gb|EEE14731.1| beta-lactamase domain protein [Burkholderia multivorans CGD2M] Length = 258 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + + T V++D G + + L V +DA+L TH H+DH+ Sbjct: 14 ALVVEATSGTTTTRVLLDCGFSAKEVERRLGRLNLCVDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + ++ + +A Sbjct: 69 ALTLARRASLPLYMSWGTARA------------------AGADEADVDLRVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|323941035|gb|EGB37222.1| ribonuclease BN [Escherichia coli E482] Length = 305 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 83/296 (28%), Gaps = 75/296 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAESL 195 ++ VP AG I Q +G G +A D +L Sbjct: 162 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAATVPGKALAIFGDTGPC-DAAL 220 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 + + +D ++ +A H S ++ I+TH+ D Sbjct: 221 DLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD 276 >gi|288799940|ref|ZP_06405399.1| VicX protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333188|gb|EFC71667.1| VicX protein [Prevotella sp. oral taxon 299 str. F0039] Length = 267 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 46/221 (20%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G + RE ++ I+ +L TH HADH+ + L + Sbjct: 21 ENEGLLIDAGVGVRTIKKYFREYGLKLSQINNILITHDHADHVKAVGALSIETGAK---- 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V++ + ++F C + P N +IE + + G + Sbjct: 77 -VWSTKPVHIGIMKNF--CVRKK-----VPEDNISIIETGSM-----FSIGSFDIQSCHV 123 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------------- 208 H + + G+ ++ TD+ + + + N+++L+++A Sbjct: 124 PHDSMDNNGYLVKYENISLGLITDIGSITQDIAHIVANVNYLVVEANHDINLLLSGKYPQ 183 Query: 209 -LKNGLHSSHFSLS-----ESLKKIELINPKNAILTHMHVD 243 LK + SSH LS + L N + L H+ D Sbjct: 184 RLKERILSSHGHLSNKDCGQLLATYGTANLQRVWLCHLSED 224 >gi|209524642|ref|ZP_03273189.1| beta-lactamase domain protein [Arthrospira maxima CS-328] gi|209494786|gb|EDZ95094.1| beta-lactamase domain protein [Arthrospira maxima CS-328] Length = 303 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 95/288 (32%), Gaps = 70/288 (24%) Query: 20 RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV 79 R G+ C N+R + + G+ V+ G D Q+ E +V Sbjct: 48 RYGGNTS-CVEMRLGNQR--------FIFDGGTGLRVL---GLDLLKQMPVEA-----SV 90 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPI---DVYAA-PDCMKHLFESFRYCFKALDDRTYP 135 ++H H DHI G +F+ PI +Y A + E D +P Sbjct: 91 FFSHTHWDHIQGF----PFFVPAFIPINRFHIYGAIAPDGSTIKERLS------DQMVHP 140 Query: 136 PIVNPIVIENNDVPICMKSAGGV------IEAIPILQQHGRISSLGFRF---GNVA-YCT 185 P+ + +D+ G V I+ H + ++G+R G A YC+ Sbjct: 141 NFPVPMHVMQSDLKFYDLIPGDVIALSDGIKIETAPLNHPNM-AVGYRVTWEGRTAVYCS 199 Query: 186 DV----NAFPAESLEKLQNLDFLIIDA--LKNGLHS--------SHFSLSESLKKIELIN 231 D + F L +N D LI DA H H + ++ + Sbjct: 200 DTEHFLDRFDNNVLHLARNADLLIYDATYTNEEYHDHKCPKIGWGHSTWEVGVEIAKKAG 259 Query: 232 PKNAILTHMH-VDLDYD---------MVLKSTPSRVVPAFDGMQFSSP 269 K M+ D +D + + P V A +GM + Sbjct: 260 VKQ---IAMYQHDPSHDDDFLDRVQLELKAAFPQGV-VAREGMVITLE 303 >gi|254495459|ref|ZP_05108383.1| ribonuclease Z [Polaribacter sp. MED152] gi|85819814|gb|EAQ40971.1| ribonuclease Z [Polaribacter sp. MED152] Length = 307 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 33/180 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG C P+ +S + +N ++D G Sbjct: 2 SINLTILG----------------CHSATPRVNAYPTSQYLEI-----NNRHFLIDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLF 119 Q+ + +V I+ + +H H DH +G+ GL + L +++ + VY + Sbjct: 41 TQRQMRKYKVGFSKINHIFISHLHGDHFYGLVGLLSTYGILSREKELHVYGPKGIKEVTL 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L + I E + + + I H R+ + G+ F Sbjct: 101 L-------QLKISQSHAKYDIIFHELSSKKSELIFEDDKVSVTTIPLNH-RVYTNGYLFK 152 >gi|323704216|ref|ZP_08115795.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536282|gb|EGB26054.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 240 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 87/246 (35%), Gaps = 47/246 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG S G P D GAC S + + V+VD G Sbjct: 1 MKLTILG---SHG-PYPGPD-GAC-----------SGYLVE-----DNGVNVLVDCGNGV 39 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQK---RPIDVYAAPDCMK 116 Q + + ++ TH H+DH+ + LR +K+ P++VY + K Sbjct: 40 ISRYQKY-HDLKDLKYIILTHLHSDHMADMLVLRYALDIMMKKGYINEPVNVYCPDEPSK 98 Query: 117 HLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + E F FK I + ++ + I K ++ + +G Sbjct: 99 VIEELGFNDVFKIK------HIDEELKLDIENFTITFKEMVHPVKTFAVKFNNGD----- 147 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKN 234 + +D + + + N D + D L NG H + ++ K + + K Sbjct: 148 ---KTFVFSSDTI-YNDQLVFFASNSDLFLCDGNLLNGEKGPHLTAKQAAKISKSAHCKK 203 Query: 235 AILTHM 240 ++TH+ Sbjct: 204 LVVTHL 209 >gi|300783395|ref|YP_003763686.1| ribonuclease Z [Amycolatopsis mediterranei U32] gi|299792909|gb|ADJ43284.1| ribonuclease Z [Amycolatopsis mediterranei U32] Length = 304 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 81/295 (27%), Gaps = 86/295 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP ++R L R ++ D Sbjct: 1 MSTR-ELVVLGT--ASQVPT-------------RHRNQNGYLL------RWDGEGILFDP 38 Query: 61 GPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRG--------------------- 97 G Q+LR V + D + TH H DH G+ G+ Sbjct: 39 GEGTQRQMLRAGVAATDITRICVTHFHGDHSLGLSGVIQRLSLDKVAHPVDAHFPASGAH 98 Query: 98 YFLKQKRPIDVY----------------------AAPDCMKHLFESFRYCFKALDDRT-Y 134 YF + + Y + H E+F Y D RT Sbjct: 99 YFERMRHATAFYEQADLREHPIAEDGPIATGKLTLEARRLSHPVEAFGYRLTEPDGRTML 158 Query: 135 PPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQ-HGRISSLGFRFGNVAYCTDVNAFPA 192 P + I DV + + G + HG A+ D Sbjct: 159 PERLREHGIAGPDVGRLQREGRLGTTTIEDVSTPRHG---------QRFAFVMDT-RLCD 208 Query: 193 ESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 +N D L+I++ +S H + ++ + + +LTH Sbjct: 209 AVYALSENADMLVIESTFLAEDTSLAKDFGHLTAQQAARVAAESGVRQLVLTHFS 263 >gi|162457319|ref|YP_001619686.1| hypothetical protein sce9034 [Sorangium cellulosum 'So ce 56'] gi|161167901|emb|CAN99206.1| hypothetical protein sce9034 [Sorangium cellulosum 'So ce 56'] Length = 281 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 78/257 (30%), Gaps = 39/257 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V R ++ +I+D G +LRE + VL +H H DHI G+ +L Sbjct: 28 SCVEVRCGSSRIILDAGTGVRKLGDALLREGPVEA-TVLLSHLHWDHIQGLPFFVPAYLP 86 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVI 159 R + + + + L E + ++P ++ + I + G + Sbjct: 87 SSR-LSIVGSAHGVGSLREVLS---TQMAAPSFPVRMDELCAQIAVREARPGEAFDVGEV 142 Query: 160 EAIPILQQHGRISSLGFRFG----NVAYCTDVNA---FPAESLEKLQNLDFLIIDAL--- 209 H L +R +V Y TD D LI DA Sbjct: 143 HVRIAKLNHPG-GVLAYRVEHEGRSVVYATDTEHYACVDPALRALADGADVLIYDAQYTP 201 Query: 210 --------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY--------DMVLKST 253 ++ + H + + + +L H D + + + Sbjct: 202 EEYRGDGGRSKVGWGHSTYVAGAEIARACGARKLVL--FHHDPQRTDAGVAEIERLSREL 259 Query: 254 PSRVVPAFDGMQFSSPI 270 V A +G+ Sbjct: 260 FPGSVAAREGLCIHVEA 276 >gi|46199081|ref|YP_004748.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55981109|ref|YP_144406.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] gi|46196705|gb|AAS81121.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55772522|dbj|BAD70963.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] Length = 573 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 67/193 (34%), Gaps = 20/193 (10%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF---ES 121 + L E I A + TH H DHI G+ L ++ P+ +Y A + L E Sbjct: 75 RVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEE 134 Query: 122 F---RYCFKALDDRT--YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F F + + ++ + + GV+ PI G I G Sbjct: 135 FGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPI----GTIVHTGD 190 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 F+ V+ + + + LI DA + G S +++ L ++ P Sbjct: 191 FKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGYTPSEMEIAKELDRVIGRAP 250 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 251 GRVFVTTFASHIH 263 >gi|259910153|ref|YP_002650509.1| ribonuclease Z [Erwinia pyrifoliae Ep1/96] gi|224965775|emb|CAX57307.1| Ribonuclease Z [Erwinia pyrifoliae Ep1/96] Length = 304 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 98/317 (30%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG GA G P R R+ I+ + N + D G Sbjct: 1 MHLQFLGTGA--GTPS----------------RERNVTGIALDLQGVRNNVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP-------- 112 Q+LR + I+ + TH H DHI G+ GL P+ +Y Sbjct: 43 QHQILRTPIKPGRIEKIFITHLHGDHIFGLPGLLTSRSMNGCVEPMTLYGPSGIKTFVET 102 Query: 113 ----------DCMKHLFESFRYCFKALDDR------TYPPIVNPIVIENNDVPICMKSAG 156 ++ + S F+ R T+P I+ +D P + + Sbjct: 103 SLSLSGSWLNFPLEIIEISAGEVFQDAHFRVTAYPLTHPVECYGYRIDEHDKPGALAAQK 162 Query: 157 GVIEAIP-------------ILQQHGRI----SSLGFRFG--NVAYCTDVNAFPAESLEK 197 +P + GRI +G + ++A D A ++E Sbjct: 163 LAAHGVPTGPYFYDLKQGRSVTLADGRIINGWDYVGSKIKGRSLAIFGDTAP-TAAAVEL 221 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---DYDM 248 +D ++ +A + H S ++ + + K I+TH+ D + Sbjct: 222 AAGVDVMVHEATLEVAMEEKANARGHSSTVQAAQVAQQSGAKKLIITHLSSRYLRHDCER 281 Query: 249 VLKSTP---SRVVPAFD 262 +L A D Sbjct: 282 LLAECRAVFPHTEMAHD 298 >gi|323351344|ref|ZP_08087000.1| ribonuclease Z [Streptococcus sanguinis VMC66] gi|322122568|gb|EFX94279.1| ribonuclease Z [Streptococcus sanguinis VMC66] Length = 309 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 89/295 (30%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQIQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ ++++ Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIFGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F+ D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFREFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRF------------GNVAYCTDVNAFPA 192 +++AG + ++G+ L G + +A D A Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPRPGKTIAILGDTRK-TA 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ D L+ +A K + H + ++ + + K +L H+ Sbjct: 222 ASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLNHIS 276 >gi|73856267|gb|AAZ88974.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 311 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 164 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 165 LNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 222 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 223 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 277 Query: 241 HVDLD 245 D Sbjct: 278 SSRYD 282 >gi|120555084|ref|YP_959435.1| ribonuclease Z [Marinobacter aquaeolei VT8] gi|166991482|sp|A1U2M9|RNZ_MARAV RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|120324933|gb|ABM19248.1| RNAse Z [Marinobacter aquaeolei VT8] Length = 323 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 60/178 (33%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG S G P T +N + + G +VD G Sbjct: 1 MEFTFLGT--SAGTP-----------TRSRN------VTGLALCLSGPKPWYLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q++R + V+ + A+ TH H DHI G+ GL L + P+D+ A P Sbjct: 42 QHQLMRTRYSVMQLRAMFITHIHGDHIFGLPGLLTSASMLGRTEPLDIIAPPQV-----R 96 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F D + +N I E D G + H R+ + F Sbjct: 97 RFIDAVIENSDSSLSYPLNFINSEAPDFYWQDDHLG----VTNVALSH-RVPCRAYVF 149 >gi|226946199|ref|YP_002801272.1| pyrroloquinoline quinone biosynthesis protein PqqB [Azotobacter vinelandii DJ] gi|259534340|sp|C1DEW8|PQQB_AZOVD RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|226721126|gb|ACO80297.1| coenzyme PQQ biosynthesis protein B [Azotobacter vinelandii DJ] Length = 302 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 95/309 (30%), Gaps = 56/309 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H ILG A G P+ + C R + S ++ + PD Sbjct: 1 MHIRILGSAAGGGFPQWNCNCRNCHGLRQGTLRATPRSQSSIALSDDGANWILCNASPDI 60 Query: 65 YMQVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ +I A++ DH G+ L++ P +V+ Sbjct: 61 RAQIEAFPALQPARAVRDTAIRALILLDSQIDHCTGL-----LGLREGCPHEVWCTEMVH 115 Query: 116 KHLFESFRYCFKALD----DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L F F L+ + PIV + P + + A P H Sbjct: 116 QDLTTGFP-LFAMLEHWNGGLHWKPIVLERSFAVDACPALRFTPIPLRSAAPPYSPHRHD 174 Query: 172 SSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSSHF-- 218 G G + Y + A E+++ D L++D L H Sbjct: 175 PHPGDNLGLLVEDSRTGGTLFYAPGLGRVDAPLRERMRRADCLLVDGTLWRDDEMIHAGC 234 Query: 219 ---------SLSES-----LKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RV 257 L +S L+ ++ ++ + +L H++ ++ + +P + Sbjct: 235 GSKLGSEMGHLPQSGAGGMLEVLDGLDGRK-VLIHINNTNP--ILDEDSPERAQLVARGI 291 Query: 258 VPAFDGMQF 266 A DGM Sbjct: 292 EVARDGMDI 300 >gi|56807965|ref|ZP_00365779.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus pyogenes M49 591] Length = 212 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 33/181 (18%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +DAV+ +H H DH+ + LR YF L Q + + +Y + Sbjct: 5 DLDAVIISHYHPDHVADLGVLRHYFQLYPKHLWQPKVLPIYGHDE--------------- 49 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------GNVA 182 D + + P V E + G + + H + FR + Sbjct: 50 -DRNEFAKLSIPDVSEGRAYDVTGVEQIGPFDITFLKTVH-PVVCYAFRIVERATGQVLV 107 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKN---GLHSSHFSLSESLKKIELINPKNAILTH 239 + D + + + + D + D H +H + E+ K +LTH Sbjct: 108 FTGD-SGYFEGLADFAKEADLFLADVYLYEGNENHMAHLTSKEAGLMASQAGVKKLVLTH 166 Query: 240 M 240 M Sbjct: 167 M 167 >gi|329116215|ref|ZP_08244932.1| ribonuclease Z [Streptococcus parauberis NCFD 2020] gi|326906620|gb|EGE53534.1| ribonuclease Z [Streptococcus parauberis NCFD 2020] Length = 309 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLVLKLLDE--INQIWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAAPDCMKHL 118 Q+L + I+ + TH H DHI G+ G R + + ID+Y ++ Sbjct: 43 QRQILETTIKPRKIEKIFITHLHGDHIFGLPGFLSSRAFQASDEQTDIDIYGPVGIKNYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + L P +N + + + +++ ++ + I +G+R Sbjct: 103 QTSLK-----LSGSRLPYQINFHEFDESSLGKILETDKFIVYTEKLAH---TIFCMGYRV 154 >gi|258543187|ref|YP_003188620.1| pyrroloquinoline quinone biosynthesis protein PqqB [Acetobacter pasteurianus IFO 3283-01] gi|256634265|dbj|BAI00241.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-01] gi|256637325|dbj|BAI03294.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-03] gi|256640377|dbj|BAI06339.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-07] gi|256643434|dbj|BAI09389.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-22] gi|256646489|dbj|BAI12437.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-26] gi|256649542|dbj|BAI15483.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-32] gi|256652528|dbj|BAI18462.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655586|dbj|BAI21513.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein B PqqB [Acetobacter pasteurianus IFO 3283-12] Length = 319 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 98/304 (32%), Gaps = 74/304 (24%) Query: 19 PRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV------ 68 P+ + AC + RT++S+ +S + +++ PD Q+ Sbjct: 32 PQWNSNAPACRRARAGDPAAPSRTQASIAVSGDGQHW----YVLNASPDLRTQINQTPDM 87 Query: 69 -LREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 RE + S I V+ T D I G+ L++++ ++YA + L + Sbjct: 88 FPREGLRSTPISGVVLTSGEIDAITGL-----LTLRERQHFNLYATQPVLDQLNANP--I 140 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG----------RISSLG 175 F ALD P + PI + AG I + + I S G Sbjct: 141 FNALDRTLVP-----RHAMQPEHPIPLVPAGFSITPFIVPGKVPLYAEKAENPAEIMSNG 195 Query: 176 FRFG--------NVAYCTDVNAFPAESLEKLQNLDFLIID--------------ALKNGL 213 G + ++ D + D K G Sbjct: 196 ENIGLEITDGHARALFIPGCAMMTDALRNRINGADVVFFDGTLWTDDEMIRAGLGSKTGH 255 Query: 214 HSSHFSLSE----SLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFD 262 H S+++ ++ ++ K IL H++ ++L +P AFD Sbjct: 256 RMGHMSIADEPDGTIAAFRPLHVKRKILIHINNSNP--ILLADSPERRAVEQAGWDVAFD 313 Query: 263 GMQF 266 GM+ Sbjct: 314 GMKV 317 >gi|162449129|ref|YP_001611496.1| hypothetical protein sce0859 [Sorangium cellulosum 'So ce 56'] gi|161159711|emb|CAN91016.1| hypothetical protein sce0859 [Sorangium cellulosum 'So ce 56'] Length = 277 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 75/257 (29%), Gaps = 39/257 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S R T VI+D G + Q L +++ + ++H H DHI G F++ Sbjct: 27 SCYEIRAGETLVILDGGTGLRLLGQELVKEMPFEAWMFFSHVHWDHIQGFPFFTPAFVR- 85 Query: 103 KRPIDVYAAPDCMKHLFES----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 I +Y + + L E+ Y + + + + Sbjct: 86 GNKIHLYGGLNVSRTLEETLAGQMDY--PSFPVHLTEMGAAMTFRDLYEGEVVTIGPNDD 143 Query: 159 IEAIPILQQHGRISSLGFRFGN----VAYCTDVNA---FPAESLEKLQNLDFLIIDALKN 211 + H +R + V Y TD + + D LI DA+ Sbjct: 144 VRVTNARGNHPN-GVYAYRVEHEGKVVVYITDSEHYAIVDPKLKKLAMGADVLIFDAMYT 202 Query: 212 GLHSS------------HFSLSESLKKIELINPKNAILTHMHVDL--------DYDMVLK 251 S H + + + K +L H H D + +M + Sbjct: 203 PEEYSGEVGGGPKTGWGHATFVAGCELAKAAGAKQLVL-H-HHDPNQTDAMVREKEMRAR 260 Query: 252 STPSRVVPAFDGMQFSS 268 + A +G Sbjct: 261 ELFPNTIAAREGTVIEI 277 >gi|260205710|ref|ZP_05773201.1| ribonuclease Z [Mycobacterium tuberculosis K85] gi|289575101|ref|ZP_06455328.1| ribonuclease Z [Mycobacterium tuberculosis K85] gi|289539532|gb|EFD44110.1| ribonuclease Z [Mycobacterium tuberculosis K85] Length = 280 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 82/263 (31%), Gaps = 52/263 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + ++ +VD G Sbjct: 2 LEITLLGTGSPIPDP---------DRAGP-------STLVRAGAQ-----AFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAPDCMKH 117 + + AVL TH H+DHI + + + P+ + P + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEV 100 Query: 118 LFESFRYCFKALDDRTYPPIVN---PIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SS 173 + + + F + P IE ++ + H + + Sbjct: 101 VEATLK-AFGHDIGYRIAHHADLTTPPPIEVHEYTAGPAWDRDGVTIRVAPTDHRPVKPT 159 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS------------ 216 +GFR +V D P +SL++L D L+ ++ + + Sbjct: 160 IGFRIESDGASVVLAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDY 217 Query: 217 HFSLSESLKKIELINPKNAILTH 239 H S+ E+ ++TH Sbjct: 218 HSSVQEAAATANRAGVGTLVMTH 240 >gi|255535073|ref|YP_003095444.1| ribonuclease Z [Flavobacteriaceae bacterium 3519-10] gi|255341269|gb|ACU07382.1| Ribonuclease Z [Flavobacteriaceae bacterium 3519-10] Length = 305 Score = 59.0 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PID 107 ++D G +Q+ + + I + +H H DH G+ GL F R P+ Sbjct: 29 EERCFLIDCGEGTQVQLRKAKARFSKISHIFISHLHGDHCFGLPGLIASFRLLGRETPLH 88 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y K + E F+ + +V +E+ + +E I + Sbjct: 89 IYGP----KGIKEMLETIFRITETHKGFELV-YHELESKQSEKIFEDK--RVEVFTIPLK 141 Query: 168 HGRISSLGFRF 178 H R+ G+ F Sbjct: 142 H-RVYCNGYLF 151 >gi|283832296|ref|ZP_06352037.1| ribonuclease Z [Citrobacter youngae ATCC 29220] gi|291071941|gb|EFE10050.1| ribonuclease Z [Citrobacter youngae ATCC 29220] Length = 305 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 94/318 (29%), Gaps = 79/318 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP T +N +++ ++ + D G Sbjct: 1 MELLFLGT--SAGVP-----------TRSRNV---TAILLNLQHPTQPGL-WLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q+L +D + +H H DH+ G+ GL R +P+ +Y Sbjct: 44 QHQMLATPFNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGNV-KPLTLYGPKGLREFTE 102 Query: 116 KHLFESFRYCFKALD---------------DRTYPPIVNP-----IVIENNDVPICMK-- 153 L S + LD T P+ +P IE +D P + Sbjct: 103 TALRLSGSWTDYPLDIVEITAGEIVDDGLRKVTAYPLEHPLECYGFRIEEHDKPGALDAS 162 Query: 154 ---SAGGVIEAIPILQQHGRISSL--------------GFRFGNVAYCTDVNAFPAESLE 196 +AG + G+ L R +VA D A ++E Sbjct: 163 ALKAAGVKSGPWFQDLKAGKTIVLEDGRTINGADFLAPATRGKSVAIFGDTGPC-ASAIE 221 Query: 197 KLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + +D ++ +D+ +S H S ++ I+TH+ D Sbjct: 222 LARGVDLMVHETTLDSSMEEKANSRGHSSTRQASLLALKAGAGRLIITHVSSRYDERGCQ 281 Query: 251 KSTPS------RVVPAFD 262 + A D Sbjct: 282 RLLEECKAIFPDTELAHD 299 >gi|227535164|ref|ZP_03965213.1| ribonuclease Z [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187209|gb|EEI67276.1| ribonuclease Z [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 320 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + ER N + D G Sbjct: 1 MEIQFLGTGAGS----------------PSKSRNVSSLALKLLDER--NEVWLFDAGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L+ + I V TH H DHI G+ G Q P+ +Y + Sbjct: 43 QHQILQTAIRPRKIAKVFITHLHGDHIFGLPGFLASRSNQGGTDPLTIYGPSGIEDFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + +YP + +++++ V + + H RI+S GFR Sbjct: 103 SLK---VSQSHLSYP--LKFVLLQHPGVAFEDQ----TFKVTFDRLDH-RITSFGFRIE 151 >gi|195978499|ref|YP_002123743.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975204|gb|ACG62730.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 269 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 75/236 (31%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ + +K + Sbjct: 25 PKRRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGIMA-----RKYNL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 DVYA + + E I N V + + G I+ Sbjct: 80 DVYANEKTWQMIDERHM-------------IGNLDVAQKHVFERGKTMTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R TD + N D +LI ++ L+ G + Sbjct: 127 SHDAVDPQFYRIMKDNRSFVMLTDTGYVSDRLAGIIANADGYLIESNHDVEILRAGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMH-----VDLDYDMVLKST 253 H S + + I + K L H+ +L + ++ Sbjct: 187 SLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVNQL 242 >gi|84489385|ref|YP_447617.1| metal-dependent hydrolase [Methanosphaera stadtmanae DSM 3091] gi|84372704|gb|ABC56974.1| predicted metal-dependent hydrolase [Methanosphaera stadtmanae DSM 3091] Length = 259 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 34/240 (14%) Query: 49 ERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-----RGYFLK 101 + + VD GP ++ +L +H H DH + L +G K Sbjct: 28 DDIDGKNIHVDPGPGALVRTHQYGLNPRKLNLILISHCHTDHYTDAEVLIEAMTQGMTRK 87 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I + + + K + ++ P ++ ++ Sbjct: 88 AGHVI---GSDSVINGHGDLGPSISKYHQSKPKVSVLKPEEEIKHE----------NLKI 134 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--S 215 I +HG + +GF N+ Y +D FP + E ++ D LI + +K G Sbjct: 135 RGIHTKHGDPTCVGFNINYKGFNINYTSDTEYFPELAEEH-KDADVLIGNVIKEGERKIK 193 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDL-------DYDMVLKSTPSRVVPAFDGMQFSS 268 H + + IE + PK AI+TH+ V+L + + K T R + A DG+ + Sbjct: 194 GHLRTRDFKQLIEEVQPKIAIMTHLRVNLIMNNPFQNTRTITKETGVRTIAATDGLTMNL 253 >gi|116754463|ref|YP_843581.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116665914|gb|ABK14941.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 255 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 87/248 (35%), Gaps = 50/248 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + +LG G +G+P+ R +SSL I +++D G Sbjct: 8 ERMNVILLGTG--VGIPQAD--------------RAQSSLLIR------DEDVLLIDCGA 45 Query: 63 D--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAA---PDCMK 116 + + L ID VL TH H DH+ + L P ++++ + M+ Sbjct: 46 GAILRLGEIGMSPLEIDTVLLTHLHLDHVADLLPLAKARYLLGEPWLNIWGPVGTEELMR 105 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + Y + I ++ ++ + H + +L + Sbjct: 106 SLQSLYPY-------------LRSIKLDVTEISAGCRFEICGFGVSSASAIHS-VPALCY 151 Query: 177 RF-GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH--SSHFSLSESL-KKIELIN 231 R G+ + PA S+ +L D L+ + ++H + +L + + + Sbjct: 152 RIEGSRTVTCSGDTEPAASVSELASGSDLLVHECSFPDGFEVTNH-TTPAALGRIVSDVG 210 Query: 232 PKNAILTH 239 ILTH Sbjct: 211 --EIILTH 216 >gi|298675012|ref|YP_003726762.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] gi|298288000|gb|ADI73966.1| beta-lactamase-like protein [Methanohalobium evestigatum Z-7303] Length = 253 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 73/215 (33%), Gaps = 45/215 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG G ++ P+ R +S + ++ D G Sbjct: 1 MNITFLGTGVAI----------------PQTDRVQSGIIAEI-----EGKPILFDCGSGI 39 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDC---MKHL 118 ++ R ID V+ +H H DH+ + L + +L K I +Y M L Sbjct: 40 LNRIFESRYNHTDIDTVVLSHLHLDHVADVLCLIKANWLCDKTNITIYGPEGTNEWMTGL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + Y + +IE + G + H + SLG+R Sbjct: 100 LKIYGYL---------QGKSDTNIIEVSAGD-TFTPDGVNCKITCSKGVHS-VPSLGYRI 148 Query: 179 GN----VAYCTDVNAFPAESLEKL-QNLDFLIIDA 208 + + Y D P +S+ L Q+ D LI + Sbjct: 149 ESGGSTIVYSGDTE--PCKSIMDLSQDADLLIHEC 181 >gi|283480259|emb|CAY76175.1| ribonuclease Z [Erwinia pyrifoliae DSM 12163] Length = 318 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 98/317 (30%), Gaps = 78/317 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG GA G P R R+ I+ + N + D G Sbjct: 15 MHLQFLGTGA--GTPS----------------RERNVTGIALDLQGVRNNVWLFDCGEGT 56 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP-------- 112 Q+LR + I+ + TH H DHI G+ GL P+ +Y Sbjct: 57 QHQILRTPIKPGRIEKIFITHLHGDHIFGLPGLLTSRSMNGCVEPMTLYGPSGIKTFVET 116 Query: 113 ----------DCMKHLFESFRYCFKALDDR------TYPPIVNPIVIENNDVPICMKSAG 156 ++ + S F+ R T+P I+ +D P + + Sbjct: 117 SLSLSGSWLNFPLEIIEISAGEVFQDAHFRVTAYPLTHPVECYGYRIDEHDKPGALAAQK 176 Query: 157 GVIEAIP-------------ILQQHGRI----SSLGFRFG--NVAYCTDVNAFPAESLEK 197 +P + GRI +G + ++A D A ++E Sbjct: 177 LAAHGVPTGPYFYDLKQGRSVTLADGRIINGWDYVGSKIKGRSLAIFGDTAP-TAAAVEL 235 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---DYDM 248 +D ++ +A + H S ++ + + K I+TH+ D + Sbjct: 236 AAGVDVMVHEATLEVAMEEKANARGHSSTVQAAQVAQQSGAKKLIITHLSSRYLRHDCER 295 Query: 249 VLKSTP---SRVVPAFD 262 +L A D Sbjct: 296 LLAECRAVFPHTEMAHD 312 >gi|161986495|ref|YP_311209.2| ribonuclease Z [Shigella sonnei Ss046] Length = 305 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|116494840|ref|YP_806574.1| beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|191638347|ref|YP_001987513.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Lactobacillus casei BL23] gi|301066401|ref|YP_003788424.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus casei str. Zhang] gi|122263742|sp|Q039J0|RNZ_LACC3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808642|sp|B3WE54|RNZ_LACCB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116104990|gb|ABJ70132.1| RNAse Z [Lactobacillus casei ATCC 334] gi|190712649|emb|CAQ66655.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Lactobacillus casei BL23] gi|300438808|gb|ADK18574.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus casei str. Zhang] gi|327382374|gb|AEA53850.1| Ribonuclease Z [Lactobacillus casei LC2W] gi|327385575|gb|AEA57049.1| Ribonuclease Z [Lactobacillus casei BD-II] Length = 320 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + ER N + D G Sbjct: 1 MEIQFLGTGAGS----------------PSKSRNVSSLALKLLDER--NEVWLFDAGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L+ + I V TH H DHI G+ G Q P+ +Y + Sbjct: 43 QHQILQTAIRPRKIAKVFITHLHGDHIFGLPGFLASRSNQGGTDPLTIYGPSGIEDFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + +YP + +++++ V + + H RI+S GFR Sbjct: 103 SLK---VSQSHLSYP--LKFVLLQHPGVAFEDQ----TFKVTFDRLDH-RITSFGFRIE 151 >gi|15896774|ref|NP_350123.1| metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|15026632|gb|AAK81463.1|AE007850_4 Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|325510945|gb|ADZ22581.1| Metallo-beta-lactamase superfamily hydrolase [Clostridium acetobutylicum EA 2018] Length = 261 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 40/181 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ V++D G + ++ ++E ID + TH H+DHI G+ L +K I Sbjct: 20 DNSKVLIDAGLSGKTIEKALKEIKEDPNEIDGIFVTHEHSDHIKGVG-----VLSRKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS--AGGVIEAIPI 164 +YA K + S I+++++ I + + + Sbjct: 75 PIYANELTWKAMMNSIG------------------KIKDDNIKIITQDYIEIKDMNILNY 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S G++ + TD+ F E K+ + D +++++ LK G + Sbjct: 117 KIPHDAASPCGYKILSGNKSACVATDLGHFADEVKSKISDADVILLESNHDVEMLKFGPY 176 Query: 215 S 215 Sbjct: 177 P 177 >gi|310791454|gb|EFQ26981.1| metallo-beta-lactamase superfamily protein [Glomerella graminicola M1.001] Length = 858 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 95/308 (30%), Gaps = 82/308 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R SS I T ++D G + Sbjct: 561 EIIPLGTGSAL----------------PSKYRNVSSTIIRVPQ----YGTYVLDCGENTL 600 Query: 66 MQVLR----EQVLSI----DAVLYTHPHADHIHGIDG-LRGY-----------------F 99 Q+ R E+V I V +H HADH G +R + Sbjct: 601 GQLRRAYPAEEVTKILQETRCVFISHMHADHQLGTARFIRAWADATARLDPPPTLTIAGT 660 Query: 100 LKQKRPIDVYAAPDCMKHLFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + Y + + F + F D PP + V + Sbjct: 661 YAMRPFLAEYNRIEPLDRERLRFLTRGDHLFPHGDG-CLPPDCPTRLASLQLVRVA---- 715 Query: 156 GGVIEAIPILQQHGRISSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFLII------DA 208 QH L + G +AY D + +E + LI D Sbjct: 716 ---------HCQHSYAGVLTWPSGLKIAYSGDCRP-SDDFVEAAKGATLLIHESTFDDDK 765 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV----LKSTPSR----VVPA 260 + + + H ++SE+L + + +LTH Y + ++TP+ V+ A Sbjct: 766 MGDAVAKKHSTMSEALDVGYRMGARRVLLTHFSQR--YAKLPLMERRTTPTGADQAVLVA 823 Query: 261 FDGMQFSS 268 FD M+ Sbjct: 824 FDQMRVKL 831 >gi|254520739|ref|ZP_05132795.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226914488|gb|EEH99689.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 263 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 84/240 (35%), Gaps = 55/240 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D ++ + E ID + TH H+DHI GI L +K I Sbjct: 20 EHAKILIDAGLPGKKIDDALKSIGENPSDIDGIFVTHEHSDHIKGIG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y+ D + + + + I + + +K ++ I Sbjct: 75 PIYSNSDTWMAM-----------EGSIGKIKEHNMRIMDRRSTLSIK----DLDIISFNI 119 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H ++ +G+ V+ TD + E + +++ + +++ + LK G + Sbjct: 120 PHDAVAPVGYTMHHNGKKVSVITDFGIYTEEIRDNIRDSEVMLLESNHDVNMLKFGPYPY 179 Query: 216 ----------SHFSLSESLKKIE---LINP-KNAIL-----THMHVDLDYDMVLKSTPSR 256 H S + K I P K IL T+ H DL + V Sbjct: 180 TLKRRILSEVGHLSNEDCGKAIVDLIRYKPNKKIILGHLSGTNNHPDLALETVSSVLKEH 239 >gi|163787728|ref|ZP_02182175.1| coenzyme PQQ synthesis protein B [Flavobacteriales bacterium ALC-1] gi|159877616|gb|EDP71673.1| coenzyme PQQ synthesis protein B [Flavobacteriales bacterium ALC-1] Length = 307 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 90/272 (33%), Gaps = 57/272 (20%) Query: 7 FTILGCGASLGVPRITGDWGACDP---TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 TILG G P+I + C + + + SE+ + D PD Sbjct: 26 ITILGIAQDAGYPQINCEKTCCKAYYDGDEAKKLVSCLGLVDLKSEQ----KWLFDATPD 81 Query: 64 FYMQ--VLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q +L++ ID V TH H H G+ L + I VY Sbjct: 82 IVEQTQILKDKHLDNGKVIDGVFLTHAHIGHYTGLMNFGREALG-GKDIPVY-------- 132 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SSLG 175 + + K + +N I ++ + + + ++ P+L H ++G Sbjct: 133 VMSRMKNYLKTNGPWSQLVALNNIELKALEND-SILALNAALKITPLLVPHRDEYSETVG 191 Query: 176 FRFG----NVAYCTDV---NAFPAESLEKLQNLDFLIIDALKNG-----------LHSSH 217 +R + + D+ N + +E+++ +D+ +DA H Sbjct: 192 YRIEGKDKSALFIPDIDKWNKWERNIIEEVKKVDYAFLDASFFRDGELNRDMSKIPHP-- 249 Query: 218 FSL-------SESLKKIELINPKNAILTHMHV 242 F+ +ES++ I H + Sbjct: 250 FTTETTTLFENESIETKNKI-----YFIHFNH 276 >gi|326779077|ref|ZP_08238342.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] gi|326659410|gb|EGE44256.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] Length = 250 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 82/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSTGSAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H H DH ID + ++ R P+ VY + Sbjct: 40 LGELQRHVGLYDLDAIFLSHLHVDHF--IDMCAYFVVRYYRHDGARPVPLPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + ++ + + + + I G +H + S G Sbjct: 98 RLTAAHG---DTPSEQAMSEVFDFHTLTSQSFEI------GPFTVRTEKVRH-PVDSFGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + +AY D A + ++ D + +A K + H + E+ + Sbjct: 148 RVEHGGSVLAYSGDTGTCDALE-DLARDADLFLCEASFVDGKEDIPDLHLNGREAGEAAA 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLVLTHI 218 >gi|228473530|ref|ZP_04058283.1| ribonuclease Z [Capnocytophaga gingivalis ATCC 33624] gi|228275137|gb|EEK13940.1| ribonuclease Z [Capnocytophaga gingivalis ATCC 33624] Length = 304 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 19/157 (12%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR---EQVLSIDAVLYTHP 84 C +P+++ ++ + ++D G LR + I + +H Sbjct: 8 CHSASPRDKARTTAQLLEMRGHL-----FLIDCGEGT-QMALRQSSAKFARIKHIFISHL 61 Query: 85 HADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H DH +G+ GL F Q R + +YA + + + + +P + Sbjct: 62 HGDHFYGLAGLISTFQLQGREAELHIYAPKGAKEAMLLLLK---VSGAHMVFP--LYFHE 116 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +E + + + + IP+ RI + GF F Sbjct: 117 LEGKESQLIFEDDKVAVTTIPLDH---RIYANGFLFK 150 >gi|124485446|ref|YP_001030062.1| hypothetical protein Mlab_0621 [Methanocorpusculum labreanum Z] gi|124362987|gb|ABN06795.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 280 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 51/163 (31%), Gaps = 27/163 (16%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++++D G + M Q +R ++ + TH H+DH+ + + V Sbjct: 20 DTDSIVIDAGLGYLMRTLQSMRLNTDNLRGLCITHEHSDHV-----RSAKAFVKAAHVPV 74 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + L P VI VP+ G ++ H Sbjct: 75 FGSGGTLDALR-----------YGNIIPATAERVICREHVPV----QAGGLKITTFRAYH 119 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 GF + + C D + L D ++++ Sbjct: 120 DAAEPTGFVIDDGDSRIGICLDTHEVSDTMKTILSACDAVVLE 162 >gi|110806235|ref|YP_689755.1| ribonuclease Z [Shigella flexneri 5 str. 8401] gi|191166492|ref|ZP_03028322.1| ribonuclease Z [Escherichia coli B7A] gi|193062399|ref|ZP_03043494.1| ribonuclease Z [Escherichia coli E22] gi|193068211|ref|ZP_03049175.1| ribonuclease Z [Escherichia coli E110019] gi|194427129|ref|ZP_03059680.1| ribonuclease Z [Escherichia coli B171] gi|194436086|ref|ZP_03068188.1| ribonuclease Z [Escherichia coli 101-1] gi|256022048|ref|ZP_05435913.1| ribonuclease Z [Escherichia sp. 4_1_40B] gi|301026902|ref|ZP_07190300.1| ribonuclease Z [Escherichia coli MS 196-1] gi|307138932|ref|ZP_07498288.1| ribonuclease Z [Escherichia coli H736] gi|331642906|ref|ZP_08344041.1| ribonuclease Z [Escherichia coli H736] gi|331678218|ref|ZP_08378893.1| ribonuclease Z [Escherichia coli H591] gi|24052705|gb|AAN43861.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041954|gb|AAP17680.1| hypothetical protein S2481 [Shigella flexneri 2a str. 2457T] gi|81246161|gb|ABB66869.1| conserved hypothetical protein [Shigella boydii Sb227] gi|110615783|gb|ABF04450.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|190903452|gb|EDV63171.1| ribonuclease Z [Escherichia coli B7A] gi|192932065|gb|EDV84664.1| ribonuclease Z [Escherichia coli E22] gi|192958490|gb|EDV88929.1| ribonuclease Z [Escherichia coli E110019] gi|194414750|gb|EDX31021.1| ribonuclease Z [Escherichia coli B171] gi|194424814|gb|EDX40799.1| ribonuclease Z [Escherichia coli 101-1] gi|260448639|gb|ACX39061.1| ribonuclease BN [Escherichia coli DH1] gi|299879521|gb|EFI87732.1| ribonuclease Z [Escherichia coli MS 196-1] gi|320174970|gb|EFW50085.1| Ribonuclease Z [Shigella dysenteriae CDC 74-1112] gi|320187392|gb|EFW62084.1| Ribonuclease Z [Shigella flexneri CDC 796-83] gi|323936667|gb|EGB32953.1| ribonuclease BN [Escherichia coli E1520] gi|323961510|gb|EGB57119.1| ribonuclease BN [Escherichia coli H489] gi|324117850|gb|EGC11749.1| ribonuclease BN [Escherichia coli E1167] gi|331039704|gb|EGI11924.1| ribonuclease Z [Escherichia coli H736] gi|331074678|gb|EGI45998.1| ribonuclease Z [Escherichia coli H591] Length = 311 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 167 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 168 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 222 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 223 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 280 Query: 244 LD 245 D Sbjct: 281 YD 282 >gi|262196824|ref|YP_003268033.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262080171|gb|ACY16140.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 309 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 37/219 (16%) Query: 52 SNTTVIVDTGPDFY---MQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D G ++L + +L +H H DHI GI + ++ I+ Sbjct: 37 AGRRIVLDAGTGLAALGDRILTLGDLARPTTILLSHVHWDHIQGIPFFKPIYIA-GSEIE 95 Query: 108 VYAAPD----CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + + P+ + L + DV I + G ++ Sbjct: 96 IISGPNGFMPLAEVLRRQMS-----PPFFPVAFDELSAEVRARDVGIGARFMVGEVQVTV 150 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFP--AESLEKL-QNLDFLIIDALKNGL--- 213 H G+R + Y TD + +L L Q D LI DA + Sbjct: 151 ARLNHPD-PVYGYRLDYDGHALVYATDTEHYSCVDPTLRALAQGADVLIYDA-QYTPEEY 208 Query: 214 ---------HSSHFSLSESLKKIELINPKNAILTHMHVD 243 H + + + + + +L H D Sbjct: 209 RGDQGPAKVGWGHSTFEAAAELARQADVERLVL--FHHD 245 >gi|118579576|ref|YP_900826.1| beta-lactamase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502286|gb|ABK98768.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379] Length = 256 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 69/206 (33%), Gaps = 49/206 (23%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDA-----VLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V++D G VLR + +IDA VL TH H DHI +K + Sbjct: 20 GDTRVLIDAGLSLRETVLRMEGRAIDASGVHGVLVTHEHIDHI-----RSAGSFARKFKV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + A+ + + F+ C P + + D I P Sbjct: 75 PILASHLVQHKMEKQFKNC-------RVIPFESGSELNFRD-----------IRIDPFPI 116 Query: 167 QHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H +GF R G TD+ +KL+ L +D L NG + Sbjct: 117 THDTCDPVGFVLESREGRCGSATDLGIATHLVRDKLRGCRALNLESNHDLDMLMNGPYPW 176 Query: 216 ----------SHFSLSESLKKIELIN 231 H S +ESL+ + + Sbjct: 177 ELKQRIKSRHGHLSNAESLELLFELA 202 >gi|172059029|ref|YP_001815489.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171991550|gb|ACB62472.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 263 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 48/220 (21%) Query: 50 RGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 T ++VD G + Q+ R ID + TH H+DHI G+ + +K Sbjct: 20 ESEQTRLLVDAGLTGKAMLALFDQIHRSP-EKIDGLFVTHEHSDHIKGVGIMA-----RK 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +YA + AL + E +V G IE Sbjct: 74 YNIPLYANEKTWAAMEAKIGKIDPALK----------FLWEVGEVK-----QFGDIEVES 118 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + F+F +A+ TD ++ D I +A L+ G Sbjct: 119 FNVSHDAADPMFFQFAHEGKRLAHITDTGYVSDRMKGVIRGADAYIFEANHDIGMLQMGH 178 Query: 214 HS-----------SHFSLSESLKKIELINPKNAILTHMHV 242 + H S ++ + + HM Sbjct: 179 YPWSVKRRILGDYGHVSNEDAAIAMSEVLDDRTKRIHMAH 218 >gi|331701034|ref|YP_004397993.1| beta-lactamase domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329128377|gb|AEB72930.1| beta-lactamase domain protein [Lactobacillus buchneri NRRL B-30929] Length = 246 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 72/219 (32%), Gaps = 35/219 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 + +++D G + + + L ++AV+ +H H DH + L+ Y+ ++ Sbjct: 25 ESGDFKLLIDCGSGALLSLEQVVDPLKLNAVILSHYHHDHTADVGVLQYYWQLHEKRYSE 84 Query: 106 --IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y LD+ + + P + G Sbjct: 85 PVLPIYG----------------HTLDEINFKGLSWPKSTKGIAYDPSQTLTVGPFTITF 128 Query: 164 ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS- 216 H + + R + + D FP + + + + D L+ D + Sbjct: 129 FKTHH-PVPAFAMRIQESSTGKVLVFTADTAYFPELT-QFVHDADLLMTDT-NFFATKTG 185 Query: 217 ---HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + +ES + N +LTH+ + D + + Sbjct: 186 QKWHMTSTESGQLAHDGNVHRLLLTHLPANGDMEQLKTE 224 >gi|320199859|gb|EFW74448.1| Ribonuclease Z [Escherichia coli EC4100B] Length = 311 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 108 ETALRISGSWTDYPLEIVEIGVGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 167 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 168 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 222 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 223 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 280 Query: 244 LD 245 D Sbjct: 281 YD 282 >gi|16263946|ref|NP_436738.1| pyrroloquinoline quinone biosynthesis protein PqqB [Sinorhizobium meliloti 1021] gi|32129911|sp|Q9EXV1|PQQB_RHIME RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|12007631|gb|AAG42539.1| coenzyme PQQ synthesis protein B [Sinorhizobium meliloti] gi|15140070|emb|CAC48598.1| probable pyrroloquinoline quinone synthesis protein B [Sinorhizobium meliloti 1021] Length = 303 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 100/317 (31%), Gaps = 67/317 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVI 57 +LG A G+P+ C DP + +T+SSL +S E + + Sbjct: 4 TSDLRIIVLGAAAGGGLPQWNCGCRNCAMARDPASGLRPQTQSSLAVSLDGESWT----V 59 Query: 58 VDTGPDFYMQVL--------REQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI 106 + PD QV R + I++V+ T+ DH+ G+ LR + L + Sbjct: 60 FNASPDIRQQVQDNCPLQPRRLRHSPIESVVLTNGDIDHLAGLLVLREKQAFTLFSTGAV 119 Query: 107 -------DVY--AAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIENNDVPICMK 153 V+ P+ + F L P P+ +E+ + + ++ Sbjct: 120 GRIVSDNPVFQVLDPELVSRKTIEIDEAFSPLSGLDARLFAVPGKVPLFLEDGEPDLGIE 179 Query: 154 SAGGVIEAIPILQQHG-RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 G + + G R V Y +L++ D + D Sbjct: 180 G----------EHTVGLELEATGRR---VYYVPGCAMMTDSLAARLRDADAVFFDGTLFS 226 Query: 210 -----------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMV----LK 251 K G H + SL ++L+N + I H++ + Sbjct: 227 DDEMILTGTGRKTGRRMGHMPIDGEGGSLDALDLLNIRRKIYVHINNTNPIWRAGSERER 286 Query: 252 STPSRVVPAFDGMQFSS 268 +DGM+ Sbjct: 287 VEARGFEIGYDGMEVRL 303 >gi|319787617|ref|YP_004147092.1| beta-lactamase [Pseudoxanthomonas suwonensis 11-1] gi|317466129|gb|ADV27861.1| beta-lactamase domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 259 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 8/149 (5%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP 105 ERG + +D G + ++ +A+ TH H DH+ G + L + +++ Sbjct: 33 ERGGQPWLTIDCGAEGLTAYEQQYGGHPEALFVTHVHLDHVAGFERLFVSAYFNPERRGR 92 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +Y + L + + V G +E P+ Sbjct: 93 IRLYVPAPVVPLLHRRVG---DYPNVLAEGGANFWDAFQLVPVGEAFWHDGLRLEVFPVR 149 Query: 166 QQHGRISSLGFRF-GNVAYCTDVNAFPAE 193 H ++ G R G++ + D P Sbjct: 150 -HHWPDTAFGLRLQGSLVWSGDTRPIPEA 177 >gi|288560818|ref|YP_003424304.1| metallo-beta-lactamase superfamily protein [Methanobrevibacter ruminantium M1] gi|288543528|gb|ADC47412.1| metallo-beta-lactamase superfamily protein [Methanobrevibacter ruminantium M1] Length = 313 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 72/236 (30%), Gaps = 34/236 (14%) Query: 49 ERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-----RGYFLK 101 + +D GP ID + +H H DH + L RG Sbjct: 28 DNFGGKNYHIDPGPGALVRSYQFGVNPTKIDGIYISHSHTDHYGDAEILIEAMTRGMTKN 87 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + + + + I+ P I+ Sbjct: 88 NGI---IMGSRSVFEKYKRWGPAISNYHRSNSKNLILVPNKIKRFP----------DFSI 134 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHS 215 HG + +GF+ V+Y +D F E + + D LI L++ Sbjct: 135 KGTDTIHGDPTGVGFQMEANNLKVSYTSDTRYF-EELKKYHKGADILIGSVLRHDDDAIK 193 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYD-------MVLKSTPSRVVPAFDGM 264 H + + + + PK AI+TH + V K+T R + AFDGM Sbjct: 194 GHMCTDDFINLVGDVKPKLAIMTHFGFKMIAANPVEQAIKVSKNTGVRTLAAFDGM 249 >gi|32129865|sp|Q50437|PQQB_METFL RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Coenzyme PQQ synthesis protein D; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|1313890|gb|AAB42380.1| homologous to A. calcoaceticus pqqV, K. pneumoniae pqqB, P. fluorescens pqqB and M. extorquens pqqG; putative [Methylobacillus flagellatus] Length = 305 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 91/317 (28%), Gaps = 69/317 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG A G P+ + CD +RT+SS+ +S V+ +T Sbjct: 1 MHIHVLGSAAGGGFPQWNCNCPNCDGLRKGTIKAKKRTQSSICVSADGINW----VLFNT 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L + ++ DH G+ LR +K+ ++Y Sbjct: 57 SPDILQQIQEFAPLQPGRAIRDTGVVGIVLIDAQIDHTTGLLMLREGQVKR----EIYCT 112 Query: 112 PDCMKHLFESFR-------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + L YC D PI P +A + A P Sbjct: 113 DMVYQDLTTGNPLLNILDHYCGVNRHD---IPIDGKHSFSVEHAPGLRFTAVALKSAAPP 169 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H G G + Y + ++ D +++D Sbjct: 170 YSPHRHDPHPGDTIGVLIEDLNNGKKAFYAPGLGEIEPHLPALMEQADCIMVDGTFWTDT 229 Query: 209 --------LKNGLHSSHF------SLSESLKKIELINPKNAILTHMHVDL-----DYDMV 249 K H + E L + +L H++ D Sbjct: 230 EMLDMGLMSKKARDIGHNPQSGPGGMMEVLD--GYPGARR-VLIHINNTNPILREDSAER 286 Query: 250 LKSTPSRVVPAFDGMQF 266 ++ T + A+DGM Sbjct: 287 VELTRRGIEVAYDGMDI 303 >gi|307300203|ref|ZP_07579988.1| coenzyme PQQ biosynthesis protein B [Sinorhizobium meliloti BL225C] gi|306905092|gb|EFN35675.1| coenzyme PQQ biosynthesis protein B [Sinorhizobium meliloti BL225C] Length = 303 Score = 59.0 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 97/316 (30%), Gaps = 65/316 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGAC----DPTNPKNRRTRSSLKISRVSERGSNTTVI 57 +LG A G+P+ C DP + +T+SSL +S E + + Sbjct: 4 TSDLRIIVLGAAAGGGLPQWNCGCRNCAMARDPASGLRPQTQSSLAVSLDGESWT----V 59 Query: 58 VDTGPDFYMQVL--------REQVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI 106 + PD QV R + I++V+ T+ DH+ G+ LR + L + Sbjct: 60 FNASPDIRQQVQDNCPLQPRRLRHSPIESVVLTNGDIDHLAGLLVLREKQAFTLFSTGAV 119 Query: 107 -------DVY--AAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIENNDVPICMK 153 V+ P+ + F L P P+ +E+ + + ++ Sbjct: 120 GRIVSDNPVFQVLDPELVSRKTIEIDEAFSPLSGLDARLFAVPGKVPLFLEDGEPDLGIE 179 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 G R V Y +L++ D + D Sbjct: 180 G----------EHTVGLELEAAGR--RVYYVPGCAMMTDSLAARLRDADAVFFDGTLFSD 227 Query: 210 ----------KNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMV----LKS 252 K G H + SL ++L+N + I H++ + Sbjct: 228 DEMILTGTGRKTGRRMGHMPIDGEGGSLDALDLLNIRRKIYVHINNTNPIWRAGSERERV 287 Query: 253 TPSRVVPAFDGMQFSS 268 +DGM+ Sbjct: 288 EARGFEIGYDGMEVRL 303 >gi|239931366|ref|ZP_04688319.1| ribonuclease Z [Streptomyces ghanaensis ATCC 14672] gi|291439737|ref|ZP_06579127.1| ribonuclease Z [Streptomyces ghanaensis ATCC 14672] gi|291342632|gb|EFE69588.1| ribonuclease Z [Streptomyces ghanaensis ATCC 14672] Length = 301 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 90/323 (27%), Gaps = 79/323 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R + D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGFLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCM 115 G Q+LR V ++ + TH H DH G+ G+ + P Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGV--IQRINLDRVPHEVTAHYPRSG 96 Query: 116 KHLFESFRY---------CFKALDDRTYPPIVNP-IVIENNDVPICMKSAGGVI------ 159 + F+ RY +A D P V P +E + ++S G + Sbjct: 97 QRFFDRLRYATAYRETVALTEAPVDVDGPLAVTPGYTLEARRLSHPVESFGYRLLEPDGR 156 Query: 160 EAIPILQ-QHG----------RISSLGF----------RFGNVAYCTDVNAFPAESLEKL 198 +P HG R +LG R A+ D Sbjct: 157 RMLPDRLAAHGIKGPDVGRLQREGALGGVSLEDVSEVRRGQRFAFVMDT-RLCEGVYALA 215 Query: 199 QNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHV------DLDY 246 + D L+I++ H + ++ + ++ +LTH + + Sbjct: 216 EGCDMLVIESTFLDEDEELAVEHGHLTAGQAARVARDAGVRHLVLTHFSQRYTDPAEFER 275 Query: 247 DMVLKSTPSRVVPAFDGMQFSSP 269 + A D ++ P Sbjct: 276 QARAAGYDGDLTVAHDLLRVPLP 298 >gi|182626473|ref|ZP_02954224.1| ribonuclease Z [Clostridium perfringens D str. JGS1721] gi|177908213|gb|EDT70774.1| ribonuclease Z [Clostridium perfringens D str. JGS1721] Length = 316 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 85/304 (27%), Gaps = 91/304 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DH +G+ GL R D+Y + ++ Sbjct: 41 QVAMRVNGTGFKSIDIICISHLHGDHTYGLPGLLSTIGNSGRTEDIYIIGPKGIKEVIEG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + H LG+ Sbjct: 101 FLITLPYLPYKLNILEDASNLEFMVKKEKMELVELNEKISSDLSIKTLELDHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKEVWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P E + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTEDIPGFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLAKRGQVKELLL 277 Query: 238 THMH 241 TH Sbjct: 278 THFS 281 >gi|28378714|ref|NP_785606.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum WCFS1] gi|254556916|ref|YP_003063333.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum JDM1] gi|300768232|ref|ZP_07078137.1| ribonuclease Z [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180905|ref|YP_003925033.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum subsp. plantarum ST-III] gi|41017549|sp|Q88VG6|RNZ_LACPL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|28271551|emb|CAD64456.1| metal-dependent hydrolase of the beta-lactamase superfamily III (putative) [Lactobacillus plantarum WCFS1] gi|254045843|gb|ACT62636.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum JDM1] gi|300494296|gb|EFK29459.1| ribonuclease Z [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046396|gb|ADN98939.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 311 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 60/180 (33%), Gaps = 34/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S + + ER N + D G Sbjct: 1 MQLEFLGTGAGS----------------PGKFRNVTSTALRLLDER--NEVWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + TH H DHI G+ GL R + P+ +Y + Sbjct: 43 QHQILRTTLKPRKIAKIFITHLHGDHIFGLPGLLSSRSFQ-GGDEPLTIYGPVGVRDFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + R + +YP + I + + A + P+ RI+ G+R Sbjct: 102 TALR---VSGTHLSYP--LKFHEITKAET--VFEDATFKVSCEPLDH---RIACFGYRVE 151 >gi|257053982|ref|YP_003131815.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692745|gb|ACV13082.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 251 Score = 59.0 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 87/294 (29%), Gaps = 73/294 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G+++ P R ++ L + R +++D G Sbjct: 1 MQLTFLGTGSAM----------------PTGNRHQTGLLLEAEGNR-----LLIDCGSGV 39 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----------KRPIDVYAA 111 + + +DAVL TH H DH+ L + P Sbjct: 40 LDALAATERGYIDLDAVLLTHHHLDHVA---DLLPLVKARWLAGASDLCIAGPP----GT 92 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 D + L + Y K +D + IE P AG + A + + Sbjct: 93 RDLLDELLDVHTYLRKHVD-------PDATDIE----PGATTLAGFDVVARAVQH---SM 138 Query: 172 SSLGFRFG-------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFS--L 220 + G+R V D AFP L + L+ D +H + Sbjct: 139 AGFGYRVSPAGADAPTVVVSGDTRAFP-AFLSTADGAEVLVHDCSFPDDVETDTHATPGS 197 Query: 221 SESLKKIELINPKNAILTHM--HVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + LTH+ H D ++ ++ S V A DG+ Sbjct: 198 LGEALAAAEASIGTVYLTHLYPHTDGRHEDMIASVHEHYAGAVAVASDGLCVEV 251 >gi|224154978|ref|XP_002192782.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 222 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 39/116 (33%), Gaps = 29/116 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G++ A R S+L + R + D G Sbjct: 2 SLELTFLGTGSAF-------PCPA---------RGASALLLRRDGHCW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAA 111 Q++R + I + TH H DHI G+ L+ K P+D+Y Sbjct: 41 TQTQLMRSHLRAAKITKIFITHLHGDHIFGLPGLLCTLSLQSSPDASKAPVDIYGP 96 >gi|18977717|ref|NP_579074.1| ribonuclease Z [Pyrococcus furiosus DSM 3638] gi|41017567|sp|Q8U182|RNZ_PYRFU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|18893452|gb|AAL81469.1| arylsulfatase, putative [Pyrococcus furiosus DSM 3638] Length = 307 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 79/296 (26%), Gaps = 94/296 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G P R S+ I SE V+ D G Sbjct: 2 IEVIFLGTGGIKPTPE----------------RNVPSIAIRIGSEI-----VLFDVGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + I + TH H DH G+ + ++ + +Y + + + Sbjct: 41 LRQMEIAGLNPMRIKRIFITHFHGDHYLGLAAIIQTMNLWDRRETLHIYGPENSGEFISN 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 L + P + +V +++ + E HG I +LG+ F Sbjct: 101 -------FLKSGYFAPGFDVVV---HEITGKARLQFENYEIWTFEVSHG-IPALGYVFKE 149 Query: 180 ----------------------------------------------------NVAYCTDV 187 V Y D Sbjct: 150 KDRRGNFDLEKIKSLGLTPGPWMKELEKRKIIKIGERVIRLSEVTGPKKRGAKVVYTGDT 209 Query: 188 NAFPAESLEKLQNLDFLIIDALK-NGLHSS---HFSLSESLKKIELINPKNAILTH 239 + +E + D LI +A + H H ++ E+ + + ++ L H Sbjct: 210 EPI-DDIVEFSKRADLLIHEATYISSEHRKDSYHTTIEEAYEMFKSSKARHLALFH 264 >gi|313609702|gb|EFR85186.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes FSL F2-208] Length = 243 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID---GL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADLGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKVDDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|300818132|ref|ZP_07098344.1| ribonuclease Z [Escherichia coli MS 107-1] gi|300529276|gb|EFK50338.1| ribonuclease Z [Escherichia coli MS 107-1] Length = 305 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 162 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 216 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKIIITHVSSR 274 Query: 244 LD 245 D Sbjct: 275 YD 276 >gi|89109086|ref|AP_002866.1| binuclear zinc phosphodiesterase [Escherichia coli str. K-12 substr. W3110] gi|90111412|ref|NP_416771.4| RNase BN, tRNA processing enzyme [Escherichia coli str. K-12 substr. MG1655] gi|157161755|ref|YP_001459073.1| ribonuclease Z [Escherichia coli HS] gi|161485891|ref|NP_708154.2| ribonuclease Z [Shigella flexneri 2a str. 301] gi|161486461|ref|NP_837870.2| ribonuclease Z [Shigella flexneri 2a str. 2457T] gi|161984902|ref|YP_408697.2| ribonuclease Z [Shigella boydii Sb227] gi|170019417|ref|YP_001724371.1| ribonuclease Z [Escherichia coli ATCC 8739] gi|188494414|ref|ZP_03001684.1| putative ribonuclease BN [Escherichia coli 53638] gi|209919719|ref|YP_002293803.1| ribonuclease Z [Escherichia coli SE11] gi|238901443|ref|YP_002927239.1| binuclear zinc phosphodiesterase [Escherichia coli BW2952] gi|253772807|ref|YP_003035638.1| ribonuclease Z [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162280|ref|YP_003045388.1| ribonuclease Z [Escherichia coli B str. REL606] gi|260844861|ref|YP_003222639.1| binuclear zinc phosphodiesterase [Escherichia coli O103:H2 str. 12009] gi|260856315|ref|YP_003230206.1| binuclear zinc phosphodiesterase [Escherichia coli O26:H11 str. 11368] gi|260868994|ref|YP_003235396.1| binuclear zinc phosphodiesterase [Escherichia coli O111:H- str. 11128] gi|300822141|ref|ZP_07102283.1| ribonuclease Z [Escherichia coli MS 119-7] gi|300903652|ref|ZP_07121570.1| ribonuclease Z [Escherichia coli MS 84-1] gi|300918567|ref|ZP_07135156.1| ribonuclease Z [Escherichia coli MS 115-1] gi|300948974|ref|ZP_07163033.1| ribonuclease Z [Escherichia coli MS 116-1] gi|301303272|ref|ZP_07209397.1| ribonuclease Z [Escherichia coli MS 124-1] gi|301647638|ref|ZP_07247432.1| ribonuclease Z [Escherichia coli MS 146-1] gi|309793147|ref|ZP_07687575.1| ribonuclease Z [Escherichia coli MS 145-7] gi|331668970|ref|ZP_08369818.1| ribonuclease Z [Escherichia coli TA271] gi|67472296|sp|P0A8V0|RNZ_ECOLI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|67472297|sp|P0A8V1|RNZ_SHIFL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991100|sp|A8A2D6|RNZ_ECOHS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189043784|sp|B1IXR8|RNZ_ECOLC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808636|sp|B6I7L2|RNZ_ECOSE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494131|sp|C4ZUB1|RNZ_ECOBW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|85675333|dbj|BAA16095.2| binuclear zinc phosphodiesterase [Escherichia coli str. K12 substr. W3110] gi|87082078|gb|AAC75328.2| RNase BN, tRNA processing enzyme [Escherichia coli str. K-12 substr. MG1655] gi|157067435|gb|ABV06690.1| ribonuclease Z [Escherichia coli HS] gi|169754345|gb|ACA77044.1| ribonuclease BN [Escherichia coli ATCC 8739] gi|188489613|gb|EDU64716.1| putative ribonuclease BN [Escherichia coli 53638] gi|209912978|dbj|BAG78052.1| conserved hypothetical protein [Escherichia coli SE11] gi|238860087|gb|ACR62085.1| binuclear zinc phosphodiesterase [Escherichia coli BW2952] gi|242377903|emb|CAQ32671.1| RNase BN [Escherichia coli BL21(DE3)] gi|253323851|gb|ACT28453.1| ribonuclease BN [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974181|gb|ACT39852.1| ribonuclease Z [Escherichia coli B str. REL606] gi|253978348|gb|ACT44018.1| ribonuclease Z [Escherichia coli BL21(DE3)] gi|257754964|dbj|BAI26466.1| binuclear zinc phosphodiesterase [Escherichia coli O26:H11 str. 11368] gi|257760008|dbj|BAI31505.1| binuclear zinc phosphodiesterase [Escherichia coli O103:H2 str. 12009] gi|257765350|dbj|BAI36845.1| binuclear zinc phosphodiesterase [Escherichia coli O111:H- str. 11128] gi|300404388|gb|EFJ87926.1| ribonuclease Z [Escherichia coli MS 84-1] gi|300414272|gb|EFJ97582.1| ribonuclease Z [Escherichia coli MS 115-1] gi|300451557|gb|EFK15177.1| ribonuclease Z [Escherichia coli MS 116-1] gi|300525271|gb|EFK46340.1| ribonuclease Z [Escherichia coli MS 119-7] gi|300841446|gb|EFK69206.1| ribonuclease Z [Escherichia coli MS 124-1] gi|301074168|gb|EFK88974.1| ribonuclease Z [Escherichia coli MS 146-1] gi|308123433|gb|EFO60695.1| ribonuclease Z [Escherichia coli MS 145-7] gi|309702579|emb|CBJ01907.1| ribonuclease Z (tRNA endonuclease) [Escherichia coli ETEC H10407] gi|313651093|gb|EFS15492.1| ribonuclease Z [Shigella flexneri 2a str. 2457T] gi|315136902|dbj|BAJ44061.1| ribonuclease Z [Escherichia coli DH1] gi|315255203|gb|EFU35171.1| ribonuclease Z [Escherichia coli MS 85-1] gi|315615535|gb|EFU96167.1| ribonuclease Z [Escherichia coli 3431] gi|323156419|gb|EFZ42574.1| ribonuclease Z [Escherichia coli EPECa14] gi|323176805|gb|EFZ62395.1| ribonuclease Z [Escherichia coli 1180] gi|323184412|gb|EFZ69788.1| ribonuclease Z [Escherichia coli 1357] gi|324020939|gb|EGB90158.1| ribonuclease Z [Escherichia coli MS 117-3] gi|331064164|gb|EGI36075.1| ribonuclease Z [Escherichia coli TA271] gi|332093633|gb|EGI98691.1| ribonuclease Z [Shigella boydii 3594-74] Length = 305 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 162 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 216 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 274 Query: 244 LD 245 D Sbjct: 275 YD 276 >gi|227544989|ref|ZP_03975038.1| ribonuclease Z [Lactobacillus reuteri CF48-3A] gi|300909976|ref|ZP_07127436.1| ribonuclease Z [Lactobacillus reuteri SD2112] gi|133930541|gb|ABO43841.1| metal-dependent hydrolase [Lactobacillus reuteri] gi|227185032|gb|EEI65103.1| ribonuclease Z [Lactobacillus reuteri CF48-3A] gi|300892624|gb|EFK85984.1| ribonuclease Z [Lactobacillus reuteri SD2112] Length = 309 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER + + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVASVALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y +++ Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPIGIKRYVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + +YP +E D G I H +I+ G+R Sbjct: 103 SLQ---VSESRLSYP----LHFVEITDDGELFNDHG--FRVIARKLDH-KIACFGYRIE 151 >gi|293376409|ref|ZP_06622643.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] gi|325839313|ref|ZP_08166779.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] gi|292644965|gb|EFF63041.1| metallo-beta-lactamase domain protein [Turicibacter sanguinis PC909] gi|325490595|gb|EGC92910.1| metallo-beta-lactamase domain protein [Turicibacter sp. HGF1] Length = 262 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 48/221 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT +++D G ++++ I + TH H DHI G+ +K + Sbjct: 20 ENTAILIDNGLSLKKLQELIKKSGFDENKIKHIFITHEHGDHIKGVG-----VCTRKWKL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +V A + + I+ P V + + + + +P Sbjct: 75 NVCATAKTIDEMHRK--------------AIIKPGVEKTTILEKNEWAEFDDLMIMPFRT 120 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID----------ALKNG 212 H + +G+ + Y TD + L+ L N D I++ + Sbjct: 121 SHDAVDPVGYMIKKDEKVLVYITDTGYITGDILKTLHNADAYIMETNHNVEMLQMCNRPW 180 Query: 213 LHS-------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S +S + + ++ L H+ D Sbjct: 181 SLKQRILDDCGHLSNEDSAYALSQLIGDKTRHIYLAHLSQD 221 >gi|254479911|ref|ZP_05093159.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] gi|214039473|gb|EEB80132.1| metallo-beta-lactamase domain protein [marine gamma proteobacterium HTCC2148] Length = 252 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 59/210 (28%), Gaps = 56/210 (26%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T +++D G ++ R + +DAVL TH H+DH G+ L K Sbjct: 18 RHGETLLMIDCGFSLRETTRRMARLGLSPEQLDAVLVTHEHSDHCAGVSKLSA-----KH 72 Query: 105 PIDVYAAPDCMKHLFESFRY---CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I VY Y CF + + I+ Sbjct: 73 QIPVYLTHGTKASGRCDGSYELLCFDCDE----------------------NFSIAEIDV 110 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLI------IDALKN 211 I H FR + TD+ + Q L+ +D L Sbjct: 111 RTIAVPHDAAEPCQFRLSAGGRCLGILTDLGCITPHVVSSYQGCHSLLLEFNHDLDMLMA 170 Query: 212 GLHSS-----------HFSLSESLKKIELI 230 G + H + ++ + + Sbjct: 171 GAYPPQLKSRVSGDWGHLNNGQAADFLRQL 200 >gi|170767465|ref|ZP_02901918.1| ribonuclease Z [Escherichia albertii TW07627] gi|170123799|gb|EDS92730.1| ribonuclease Z [Escherichia albertii TW07627] Length = 305 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 88/303 (29%), Gaps = 89/303 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQAGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAP----- 112 Q+L ++ + +H H DH+ G+ GL R + P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNAQ-PLSIYGPKGIREF 100 Query: 113 -DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVN 139 + L + Y + ++ P +N Sbjct: 101 VETALRLSGSWTDYPLEIVEISAGEILDDGLRKVTAYPLEHPLECYGYRVEEHDKPGALN 160 Query: 140 PIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVN 188 ++ VP AG I Q +G + G FG+ A CT Sbjct: 161 AQALKAAGVPPGPLFQELKAGKTITLEGGRQINGADYVSAPTPGKAIAIFGDTAPCT--- 217 Query: 189 AFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 +LE + +D ++ +A H S ++ I+TH+ Sbjct: 218 ----AALELAKGVDVMVHEATLNMEMEAKANSRGHSSTRQAATLARDAGVCKLIITHVSS 273 Query: 243 DLD 245 D Sbjct: 274 RYD 276 >gi|218781273|ref|YP_002432591.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762657|gb|ACL05123.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 253 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 93/283 (32%), Gaps = 53/283 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +ILG G VP + R+ S +S ++ ++ D+G Sbjct: 1 MKISILGSGT--CVPSL--------------ERSTCSALVSA-----GDSRLLFDSGAGT 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 ++L + + + ++H H DH+ + K P Y + Sbjct: 40 MRRLLETGHTIQDVTHIFFSHLHPDHVG---EFVPFLFSTKYP-KEYGRRTPFSIIAARG 95 Query: 123 RYCFKALDDRTYPP--IVNPIVIE----NNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 F + +++P ++E + D P A +E P+ S+GF Sbjct: 96 FKEFYKNLQSAFGGWIVLDPGIMEILEVDADGPDRRDFADFTVETRPMEHTD---QSVGF 152 Query: 177 RFG----NVAYCTDVNA----FPAESLEKLQNLDFLIIDALKNG-LHSSHFSLSESLKKI 227 R + Y D + L + AL + H + S++ + Sbjct: 153 RINAGSKSFVYSGDTDYCQDLIDLALGADLLLCEC----ALPDENKVPGHLTPSQAGEIA 208 Query: 228 ELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPAFDGMQF 266 L K +LTH + + D +D K+ + A D M+ Sbjct: 209 ALAEVKKLVLTHFYPECDEAPVFDQCRKTWSGPLDLAQDLMEI 251 >gi|41408521|ref|NP_961357.1| hypothetical protein MAP2423c [Mycobacterium avium subsp. paratuberculosis K-10] gi|254774376|ref|ZP_05215892.1| hypothetical protein MaviaA2_06865 [Mycobacterium avium subsp. avium ATCC 25291] gi|41396877|gb|AAS04740.1| hypothetical protein MAP_2423c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 275 Score = 58.6 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 78/252 (30%), Gaps = 50/252 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S + R + +++D G Sbjct: 19 RITVLGCSGS----VVGPDSPA-------------SGYLLRAPDTPP---LVIDFGGGVL 58 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHLF 119 + R S VL +H HADH + GL + ++ P +Y D L Sbjct: 59 GALQRYADPSSVHVLLSHLHADHCLDLPGL--FVWRRYHPTRPLGKAMLYGPGDTWSRL- 115 Query: 120 ESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 Y ++ + + G + P + H S G R Sbjct: 116 --------GAASSPYGGEIDDCSDIFDVRHWVDGEPVTIGGLTVTPRVVAHPT-ESYGLR 166 Query: 178 FGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIE 228 + Y D A + +E + D + +A + + H S +E+ + Sbjct: 167 VTDHTGASFVYSGDTGAC-DQLVELARGADVFLCEASWTHSPDRPPALHLSGTEAGRAAA 225 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 226 QAGVHELLLTHI 237 >gi|307326962|ref|ZP_07606153.1| pyrroloquinoline quinone biosynthesis protein PqqB [Streptomyces violaceusniger Tu 4113] gi|306887498|gb|EFN18493.1| pyrroloquinoline quinone biosynthesis protein PqqB [Streptomyces violaceusniger Tu 4113] Length = 304 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 15/103 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A GVP+ C +P RR +SL + R +V+ P Sbjct: 1 MRVRVLGTAAGGGVPQWNCACPGCSGARAHPGWRRRHASLAVQAAEGRW----YLVNATP 56 Query: 63 DFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLR 96 D QV L + V+ T DH GI LR Sbjct: 57 DLGEQVEDCPELHPGPEPRRTPLAGVILTDAELDHTLGIARLR 99 >gi|304385117|ref|ZP_07367463.1| ribonuclease Z [Pediococcus acidilactici DSM 20284] gi|304329311|gb|EFL96531.1| ribonuclease Z [Pediococcus acidilactici DSM 20284] Length = 330 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 55/180 (30%), Gaps = 32/180 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + LG GA P R +S+ + + E N + D G Sbjct: 21 ESMQLEFLGTGAGS----------------PGRFRNVTSVALKLLDES--NEVWLFDCGE 62 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHL 118 Q+L+ + ID + +H H DHI G+ G Q + +Y + Sbjct: 63 ATQHQILKTNIRPRKIDKIFISHLHGDHIFGLPGFLSSRSNQGGDSELTIYGPAGIKDFV 122 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 AL +E + A V+E + RI S GFR Sbjct: 123 MT-------ALRISETKLAYRIRFVEITKGGKLFEDANYVVEVAELDH---RIKSYGFRV 172 >gi|196234103|ref|ZP_03132937.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] gi|196221852|gb|EDY16388.1| beta-lactamase domain protein [Chthoniobacter flavus Ellin428] Length = 268 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 53/177 (29%), Gaps = 44/177 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG G++ G+ + R ++VD G Sbjct: 2 FSVTILGSGSA-------GNC----------------ALVETPQAR-----LLVDGGLSA 33 Query: 65 YMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 VLR + ID VL TH H DH ++ ++ +Y + L Sbjct: 34 RQIVLRLAKCGVNPVEIDGVLLTHEHGDHSGALE-----VWCKQFATPIYCNRLTAEVLQ 88 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIPILQQHGRISSLG 175 + + V D+ + +E + + HG +LG Sbjct: 89 RE----SSPQSRKDWKLFVTGSAFSIKDITVETFPVPHDAVEPVGFVLHHGN-EALG 140 >gi|116511251|ref|YP_808467.1| beta-lactamase superfamily hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|125623279|ref|YP_001031762.1| ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|116106905|gb|ABJ72045.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactococcus lactis subsp. cremoris SK11] gi|124492087|emb|CAL97016.1| Ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|300070029|gb|ADJ59429.1| ribonuclease Z [Lactococcus lactis subsp. cremoris NZ9000] Length = 270 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 54/160 (33%), Gaps = 27/160 (16%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + + + IDA+L TH H+DHI GI L +K I Sbjct: 26 PKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIG-----VLARKYGI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++YA D L + P+ + E G I+ Sbjct: 81 NLYANEDTWSEL--------DGKNALGKIPLEQKHLFEMGK-----TMTFGDIDIESFGV 127 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD 202 H I+ +RF + TD ++N D Sbjct: 128 SHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMRGTIENAD 167 >gi|195970182|ref|NP_385387.2| hypothetical protein SMc01929 [Sinorhizobium meliloti 1021] gi|307301106|ref|ZP_07580875.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti BL225C] gi|307317840|ref|ZP_07597278.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti AK83] gi|187904167|emb|CAC45860.2| Hypothetical protein SMc01929 [Sinorhizobium meliloti 1021] gi|306896602|gb|EFN27350.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti AK83] gi|306904061|gb|EFN34647.1| RNA-metabolising metallo-beta-lactamase [Sinorhizobium meliloti BL225C] Length = 555 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 38/206 (18%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 G ++VD G F + L EQ ++ A++ TH H DH ++ Sbjct: 28 GRPGHRQWIMVDCGVTFPGPELPGVDLVLPDIAFLAEQRRNLKAIIITHAHEDHYGALND 87 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L + VYA+P L + F+ R+ PI + +V Sbjct: 88 LWP-----GLNVPVYASPFTAGMLEA--KRAFE--KSRSEIPITIFKQGDRINVGPFSVE 138 Query: 155 AGGVIEAIP------ILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQNLDFL 204 A GV +IP I Q G + G ++ ++ TD + F E + L Sbjct: 139 AVGVNHSIPEPMALVIRTQLGTVVHTGDWKIDLEPSLGPLTDESRFRQIGEE---GVLAL 195 Query: 205 IID---ALKNGLHSSHFSLSESLKKI 227 + D AL+ G+ S +SESL KI Sbjct: 196 VCDSTNALREGVSPSERQVSESLAKI 221 >gi|253998313|ref|YP_003050376.1| beta-lactamase domain-containing protein [Methylovorus sp. SIP3-4] gi|253984992|gb|ACT49849.1| beta-lactamase domain protein [Methylovorus sp. SIP3-4] Length = 254 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 46/252 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S G I G N RT +SL + + +++D G Sbjct: 1 MQVKVLGC--SGG---IGG-----------NLRT-TSLLV--------DDDILIDAGTGV 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFR 123 + EQ+ ID V TH H DHI + + ++ P+ ++ P+ + L Sbjct: 36 GDLSI-EQMAKIDHVFLTHSHLDHIACLPLMLDTVAGLREAPVTIHGLPETLHALKT--- 91 Query: 124 YCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + F D + P ++ +V + P+ H ++++G+ Sbjct: 92 HIFNWIIWPDFSAVPSETSPLLRYAEVAQGKAVSLSGRSITPLPANH-TVAAVGYWLDSG 150 Query: 179 -GNVAYCTDVNAFPA--ESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIEL 229 G++ + D A E + +++NL +L+I+ L + S H S ++ Sbjct: 151 AGSMVFTGDTTTCDALWEQVNQIENLKYLLIETAFGNDELALAVTSKHLCPSLLFDELGK 210 Query: 230 I-NPKNAILTHM 240 + + +TH+ Sbjct: 211 LKKSAHVYITHL 222 >gi|239631569|ref|ZP_04674600.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526034|gb|EEQ65035.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 320 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + ER N + D G Sbjct: 1 MEIQFLGTGAGA----------------PSKSRNVSSLALKLLDER--NEVWLFDAGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L+ + I V TH H DHI G+ G Q P+ +Y + Sbjct: 43 QHQILQTAIRPRKIAKVFITHLHGDHIFGLPGFLASRSNQGGTDPLTIYGPSGIEDFVKT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + +YP + +++++ V + + H RI+S GFR Sbjct: 103 SLK---VSQSHLSYP--LKFVLLQHPGVAFEDQ----TFKVTFDRLDH-RITSFGFRIE 151 >gi|300958961|ref|ZP_07171063.1| ribonuclease Z [Escherichia coli MS 175-1] gi|300314413|gb|EFJ64197.1| ribonuclease Z [Escherichia coli MS 175-1] Length = 305 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHRDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 162 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 216 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 274 Query: 244 LD 245 D Sbjct: 275 YD 276 >gi|160916096|ref|ZP_02078303.1| hypothetical protein EUBDOL_02123 [Eubacterium dolichum DSM 3991] gi|158431820|gb|EDP10109.1| hypothetical protein EUBDOL_02123 [Eubacterium dolichum DSM 3991] Length = 249 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 58/184 (31%), Gaps = 48/184 (26%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHAD 87 R SL S + +T++++D G + + S DA+L TH H+D Sbjct: 1 MRFSLLASGSQGNCCVIQHKDTSIVIDCGTTKKYLLGAFEQIAYDYQSSDAILITHTHSD 60 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI +K I YA + P I + Sbjct: 61 HIA--------QMKMFEQIPTYAT---------------------SAIPTSYLHTIAPFE 91 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 + I + H ++GF + Y TD E + +QN D+ Sbjct: 92 -----EFDIKDIHITVLPMSHDCEGTVGFLLEGDDEKLVYITDTGYVKEEVRQWIQNADY 146 Query: 204 LIID 207 I++ Sbjct: 147 YILE 150 >gi|125718241|ref|YP_001035374.1| ribonuclease Z [Streptococcus sanguinis SK36] gi|166991511|sp|A3CNR9|RNZ_STRSV RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|125498158|gb|ABN44824.1| Ribonuclease Z, putative [Streptococcus sanguinis SK36] Length = 309 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 85/303 (28%), Gaps = 93/303 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + ++ +++Y + Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTNLEIYGPKGIKNFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR- 177 S R + P ++ + N + +++ H I +G+R Sbjct: 103 LSSLR-----VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCVGYRV 154 Query: 178 ------------------------FGN-----------------------------VAYC 184 FG +A Sbjct: 155 MQKDLEGTLDADKLREVGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPRPGKIIAIL 214 Query: 185 TDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILT 238 D + S+ D L+ +A K + H + ++ + + K +L Sbjct: 215 GDTRK-TSASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKRLLLN 273 Query: 239 HMH 241 H+ Sbjct: 274 HIS 276 >gi|16800001|ref|NP_470269.1| hypothetical protein lin0930 [Listeria innocua Clip11262] gi|16413378|emb|CAC96162.1| lin0930 [Listeria innocua Clip11262] gi|313619713|gb|EFR91330.1| metal-dependent beta-lactamase superfamily III protein [Listeria innocua FSL S4-378] Length = 243 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNFIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAVEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + +N D L+ D Sbjct: 119 LEIGPFKVTFLKTVH-PVPCYAMRIEAAGKIFVYTAD-SAYQDSFIPFAENADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|302545477|ref|ZP_07297819.1| ribonuclease Z [Streptomyces hygroscopicus ATCC 53653] gi|302463095|gb|EFL26188.1| ribonuclease Z [Streptomyces himastatinicus ATCC 53653] Length = 306 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 83/295 (28%), Gaps = 80/295 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSAR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V I+ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDINRICVTHFHGDHSLGLAGVIQRINLDRVPHPVTAHYPASGQR 98 Query: 93 --DGLRGY------FLKQKRPI----------DVYAAPDC-MKHLFESFRYCFKALDDRT 133 D LR +RP+ Y + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVRLTQRPVSGDGGVIARTPAYTLEAVRLSHPVESYGYRLIEPDGRR 158 Query: 134 -YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P + + ++ + + + + S R A+ D Sbjct: 159 MLPERLAAHGVRGPEIGRLQREGAIERDGRTVTLE---EVSEARRGQRFAFIMDT-RLCE 214 Query: 193 ESLEKLQNLDFLIIDAL---KNGLHSS---HFSLSESLKKIELINPKNAILTHMH 241 + + D L+I++ ++ ++ H + ++ + ++ +LTH Sbjct: 215 GAHALAEGCDLLVIESTFLDEDEPLATEHGHLTAGQAARIAAGAGVRHLVLTHFS 269 >gi|197303575|ref|ZP_03168613.1| hypothetical protein RUMLAC_02301 [Ruminococcus lactaris ATCC 29176] gi|197297309|gb|EDY31871.1| hypothetical protein RUMLAC_02301 [Ruminococcus lactaris ATCC 29176] Length = 302 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 89/276 (32%), Gaps = 58/276 (21%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGI--------- 92 ++ + R + +++++D G + V + ID + +TH H DHI G+ Sbjct: 20 LTALMTRYNGSSLLIDCGEGTQVAVKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGN 79 Query: 93 -DGLRGY-------------FLKQKRP-ID---VYAAPDCMKHLFESFRY---------- 124 D L+ P + +Y + + FE Y Sbjct: 80 ADRKEPLTLIGPKGLERVVGCLRVIAPELPFPIIYKEIEGAEQCFEMNGYRLKAFRVNHN 139 Query: 125 --CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLG-FRFG- 179 C+ + +P+ + ++P S E + + H LG R G Sbjct: 140 VLCYGYTIEIDRSGKFDPVRAKEQNIPQKYWSVLQRGECVDAEEGHFTPEMVLGPPRKGI 199 Query: 180 NVAYCTDVNAFPAESLEK-LQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELIN 231 + Y TD P +S+ K ++ D I + + H + E+ + + Sbjct: 200 KLTYTTDTR--PTDSIRKNAKDSDLFICEGMYGEKEKAAKAVEYKHMTFYEAAELAKETR 257 Query: 232 PKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDG 263 K LTH L Y ++ DG Sbjct: 258 VKELWLTHYSPSLTRPEPYMEDVRKIFPNAKAGKDG 293 >gi|41017751|sp|Q8HY87|RNZ2_MACFA RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|26000220|gb|AAN75377.1| ELAC2 [Macaca fascicularis] Length = 826 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 107/305 (35%), Gaps = 66/305 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ VP + S + +S T++++D G Sbjct: 478 SQYPEIVFLGTGSA--VPM---------------KTRNVSATLVNISPD---TSLLLDCG 517 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPI 106 + Q+ R +D AV +H HADH G+ + ++ P+ Sbjct: 518 EGTFGQLYRHYGDQVDRVLGSLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPFHPL 576 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P V P + ++ E Sbjct: 577 LVVAPTQLKAWLQQYHNQCQEVLHHVSMIPAKYLQVGAEISSPAVERLISSLLRTCDLEE 636 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H R + + G++ V Y D P E+L ++ ++ LI D Sbjct: 637 FQTCLVRHCRHAFGCALVHTSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLED 691 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S++++ +N + +L H Y V +P +V AFD Sbjct: 692 GLEEEAVEKTHSTTSQAIRVGMRMNAEFIMLNHFSQR--YAKVPLFSPDFNEKVGIAFDH 749 Query: 264 MQFSS 268 M+ S Sbjct: 750 MKVSF 754 >gi|167581367|ref|ZP_02374241.1| metallo-beta-lactamase family protein [Burkholderia thailandensis TXDOH] Length = 258 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + ++ R + +DA+L TH H DH+ Sbjct: 14 ALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + V+ V+ ++ +A Sbjct: 69 ALTLARRASLPLYTSWGTARAVGAD-------------EAGVDLRVLWGDE-----TAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFAFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEA 166 >gi|296123908|ref|YP_003631686.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] gi|296016248|gb|ADG69487.1| beta-lactamase domain protein [Planctomyces limnophilus DSM 3776] Length = 335 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 L I + V++D G + + + EQ+ + VL TH H DH G+D + + Sbjct: 24 LLIDYPDRDDA---VLLDAGENGALSL--EQLADLSVVLITHHHIDHFVGLDRIIRANMD 78 Query: 102 QKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + + +Y P ++ + + Y F+ + +++ I + + G Sbjct: 79 RDKTLRIYGPPKTIEKVADRIRSYEFQFFPFQKI--VIDVYEIHEDGFRVGRLDCGRKF- 135 Query: 161 AIPILQQHGRISSLGFRFGN--------VAYCTDVNAFPAESLEKLQNLD-FLIIDALKN 211 P + + F N A + P S ++ FL +DAL+ Sbjct: 136 --PPPEIRDEARTGCVIFENETIQVEAVFA----EHTVPCLSYAVIEKPGWFLNVDALRK 189 Query: 212 GLHSSHFSLSESLKKIELINP 232 L + + L + P Sbjct: 190 SLLKPGSWIGDVLGLLREDAP 210 >gi|20807421|ref|NP_622592.1| beta-lactamase superfamily hydrolase [Thermoanaerobacter tengcongensis MB4] gi|20515943|gb|AAM24196.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Thermoanaerobacter tengcongensis MB4] Length = 240 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 78/225 (34%), Gaps = 27/225 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLR---GYFLKQK-- 103 +T +++D G + R + + V+ +H H+DH+ + LR + Sbjct: 25 EDEDTHILLDCGSGVISRYQRYYDLNELKHVILSHLHSDHMSDMLVLRYALDILRARGTV 84 Query: 104 -RPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 P++VY L E F+ FK I V+ ++ I K +E Sbjct: 85 NDPVNVYCPATPENVLEELKFKDVFKIH------TINEETVLNIGEIEISFKKMNHPVET 138 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSL 220 + + G Y D + E + + D L+ D G+ H + Sbjct: 139 YAVKMKKGDKI--------FVYSADTV-YTEELIALAEGADLLLCDGNFLTGMQGPHMTA 189 Query: 221 SESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 +E+ + + K ILTH+ + DY K A D Sbjct: 190 AEAAEIAKKAGCKKLILTHLSPLISIKDYYDEAKKVFENTEIARD 234 >gi|284922259|emb|CBG35344.1| ribonuclease Z (tRNA endonuclease) [Escherichia coli 042] Length = 305 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQALKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|78484479|ref|YP_390404.1| cyclic-AMP phosphodiesterase [Thiomicrospira crunogena XCL-2] gi|78362765|gb|ABB40730.1| cyclic-AMP phosphodiesterase [Thiomicrospira crunogena XCL-2] Length = 259 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 28/171 (16%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID 107 + TV++D G + E++ ++A++ TH H DHI + + L + I Sbjct: 24 DQTVLLDAGTGV-ESLTYEEMQQVEAIVLTHSHLDHISHL----PFLLNNLIGGSHQTIQ 78 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY + L + D T P P V +++ DV + AG + +P Sbjct: 79 VYGLSHTIDALKKHIFNDIIWPDFTTLPSHDCPCVQLNIVKYGDV---LSLAGKQVVVLP 135 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNL---DFLIID 207 H + + G+ GN A+ D + + L NL D LI+D Sbjct: 136 ---AHHSVPTAGYWIGNDDAAFAFSGDCSE-NDDLWHALNNLPPVDMLIMD 182 >gi|304404445|ref|ZP_07386106.1| ribonuclease Z [Paenibacillus curdlanolyticus YK9] gi|304346252|gb|EFM12085.1| ribonuclease Z [Paenibacillus curdlanolyticus YK9] Length = 308 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 55/178 (30%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA P R +S + + + + D G Sbjct: 1 MELTFLGTGA----------------GRPSRLRNVTSAALKLPAPS--LSVWLFDAGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++L+ + ID + TH H DH+ G+ GL + P+ +Y L + Sbjct: 43 QHRLLQTPIKLNRIDRIFITHLHGDHVFGLPGLLSTRAYDGGVGPVTIYGPA----GLQQ 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F+ I +E + +EA + RI G+R Sbjct: 99 MVECLFQLSGTYIGYDIQYVEAVEG----VIFDDGNYRVEAAALEH---RIPCFGYRV 149 >gi|116624769|ref|YP_826925.1| RNAse Z [Candidatus Solibacter usitatus Ellin6076] gi|116227931|gb|ABJ86640.1| RNAse Z [Candidatus Solibacter usitatus Ellin6076] Length = 290 Score = 58.6 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 79/259 (30%), Gaps = 46/259 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G NP R +L I N +VD GP Sbjct: 22 RVVLLGTGN----------------PNPDPDRMGPALAI-----LSGNRAYLVDCGPGVV 60 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI--DVYAAPDCM---KHL 118 + + + + V TH H+DH G L R + + Y P H+ Sbjct: 61 RRAAQAGISMARLTRVFITHLHSDHTAGYPDLILTPPNAGREVALEAYGPPGLRSMTSHI 120 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFR 177 +++ F T P + +DV + I HG + G+R Sbjct: 121 LKAWSEDFDIRLHGTQPHTAAAYTVNAHDVRPGEIYRDDTVRVIAFAVPHGAWKYAYGYR 180 Query: 178 FGN----VAYCTDVNAFPAESLEKLQNLDFLIID-----------ALKNGLHSS-HFSLS 221 F + D + + + D L+ + A H++ H S Sbjct: 181 FEAKDKVIVVSGDT-TYSPGLIAAAKGADILVHEVYSQKGWEERTADWRKYHAAYHTSGP 239 Query: 222 ESLKKIELINPKNAILTHM 240 + + + P+ +L H+ Sbjct: 240 DVGRVAAQVQPRILVLYHL 258 >gi|251796637|ref|YP_003011368.1| ribonuclease Z [Paenibacillus sp. JDR-2] gi|247544263|gb|ACT01282.1| ribonuclease Z [Paenibacillus sp. JDR-2] Length = 309 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 81/289 (28%), Gaps = 70/289 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S+ + S + D G Sbjct: 1 MEIWFLGTGA----------------GRPMKHRNVTSIALRLPDPDCSL--WMFDAGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF- 119 Q++R ++ ++A+ TH H DH +GI GL ++ P+ ++ P + + Sbjct: 43 QHQLMRTPLKLNKLEALFVTHLHGDHTYGIPGLLSTRSYVGGNTPLQLFGPPGIREMIET 102 Query: 120 ------ESFRYCFKALDDR-TYPPIVNPIVIENNDVPICMKSAGGVIE--AIPILQQHGR 170 Y + +E + + G I P R Sbjct: 103 ALTLSSSRLDYEITYHEVSEGVVYKTERYTVEALPLEHRVPCFGYRITECESPGKLNVER 162 Query: 171 ISSLGF----RFGNV-----AYCTDVNAFP-----------------------AESLEKL 198 + LG FG + D +L Sbjct: 163 LQQLGVPAGPLFGRIKKGEDVTLPDGTLILAADVAGKPQCGRIITIAGDTKPCDNALRLA 222 Query: 199 QNLDFLIIDAL-----KNGLH-SSHFSLSESLKKIELINPKNAILTHMH 241 QN D L+ +A + H H + E+ N K I+TH Sbjct: 223 QNADLLVHEATFAAGQEEKAHLYGHSTTVEAATTARDANAKRLIMTHFS 271 >gi|308175746|ref|YP_003922451.1| hydrolase [Bacillus amyloliquefaciens DSM 7] gi|307608610|emb|CBI44981.1| putative hydrolase [Bacillus amyloliquefaciens DSM 7] gi|328555720|gb|AEB26212.1| hydrolase [Bacillus amyloliquefaciens TA208] gi|328914106|gb|AEB65702.1| putative hydrolase [Bacillus amyloliquefaciens LL3] Length = 264 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ + +K Sbjct: 22 EEHSFLVDAGLSGKAMDGLMEQIGR-KIDDVDGIFVTHEHSDHIKGLG-----VIARKYG 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA K + I + P+ + G ++ Sbjct: 76 LPVYANEKTWKAMEN---------------QIGKLDTGQKFLFPMESVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + +L ++I L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARM 231 >gi|21283187|ref|NP_646275.1| hypothetical protein MW1458 [Staphylococcus aureus subsp. aureus MW2] gi|49486342|ref|YP_043563.1| hypothetical protein SAS1444 [Staphylococcus aureus subsp. aureus MSSA476] gi|297207776|ref|ZP_06924211.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911857|ref|ZP_07129300.1| ribonuclease Z [Staphylococcus aureus subsp. aureus TCH70] gi|41017562|sp|Q8NWE6|RNZ_STAAW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|56749386|sp|Q6G960|RNZ_STAAS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|21204627|dbj|BAB95323.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49244785|emb|CAG43221.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887793|gb|EFH26691.1| ribonuclease Z [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886103|gb|EFK81305.1| ribonuclease Z [Staphylococcus aureus subsp. aureus TCH70] Length = 306 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 90/292 (30%), Gaps = 76/292 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L ++ + + TH H DHI G+ GL R + +++P+ + ++ Sbjct: 43 QHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVE 102 Query: 120 ESF-----------------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 S + D T + + + + G I Sbjct: 103 MSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGVPSYGYRVMAPETTGTINVE 162 Query: 163 PIL-------------QQHGRISSLG-------FRFGN-----VAYCTDVNAFPAESLEK 197 + + H G FR + VA D E + Sbjct: 163 ALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNERV-I 221 Query: 198 LQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ D ++ +A L N H SH + + I+ N K ++TH+ Sbjct: 222 SRDADVMVHEATYIDGEKHLANNYHHSH--IEDVFALIKEANVKRTLITHLS 271 >gi|48477347|ref|YP_023053.1| metal dependent hydrolase [Picrophilus torridus DSM 9790] gi|48429995|gb|AAT42860.1| metal dependent hydrolase [Picrophilus torridus DSM 9790] Length = 228 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 28/217 (12%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHAD 87 K + SS+ I N ++VD GP +L V I+ VL TH H D Sbjct: 10 SARLKRGKRNSSILI--------NKNILVDCGPHTVEALLEMDVNPCDINPVLITHMHLD 61 Query: 88 HIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 H G+ L + + + + + + + + + + IE Sbjct: 62 HFSGLIELI-WHRSMSNCDPLLIIGPENIEDSIKKLLKLYYSPENFYNFKVLDKFNGIER 120 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK-LQNLDFL 204 + G IE L G +SL N AY +DV + ++N Sbjct: 121 FNGKHPAPDYGYRIEMDKTLFFSGD-TSLSDEIINGAYKSDV-LMHEATYPSGMEN---- 174 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 H ++S++++ + +A+L MH Sbjct: 175 ------EAALHGHSTVSQAIEAFKRSG--SAMLVPMH 203 >gi|260590997|ref|ZP_05856455.1| ribonuclease Z [Prevotella veroralis F0319] gi|260536862|gb|EEX19479.1| ribonuclease Z [Prevotella veroralis F0319] Length = 304 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P R SS I ++D G +Q+ R + I AV +H H Sbjct: 11 CGSALPTLRHYPSSQVIEL-----REKQFMIDCGEGTQIQLRRLHIHFSRIIAVFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G+ F R P+ +YA L ++ + + L V + Sbjct: 66 GDHCFGLPGMLSTFGMTGRTAPLHIYAPSSFEPILQQTLDFFCQGLGFE-----VIFHGL 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + +E IP+ R+ GF F Sbjct: 121 DTTQQKVIYEDRSLTVETIPLQH---RVECCGFLF 152 >gi|134100847|ref|YP_001106508.1| metal-dependent hydrolase [Saccharopolyspora erythraea NRRL 2338] gi|133913470|emb|CAM03583.1| metal-dependent hydrolase [Saccharopolyspora erythraea NRRL 2338] Length = 225 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 68/225 (30%), Gaps = 31/225 (13%) Query: 57 IVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--------KRPID 107 ++D G + R ++A+L TH H DH L Y + +R + Sbjct: 1 MIDLGNGTMGPLQRWTDPFDVNALLLTHLHPDHCADFAPLAVYLRYRPNKPYDPTQRRMP 60 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA + L + + + P G E Sbjct: 61 VYAPREAPSRLAALYA------PSAEELGQTDLSDVFEFLEPPAEPVRVGDFEIRAFPVD 114 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKL-QNLDFLIIDA----LKNGLHSSHF 218 H + G R A+ D P++ + KL D L+ +A + H Sbjct: 115 H-LCPTWGLRIEAEDRVFAFTGDTG--PSDEIAKLAAGADVLLSEASWLDSPDQPAGVHL 171 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 S ++ + +LTH D +L AFDG Sbjct: 172 SGKQAGAAAASAGVRRLLLTHYSPWTDQQALLGEARE----AFDG 212 >gi|148543891|ref|YP_001271261.1| ribonuclease Z [Lactobacillus reuteri DSM 20016] gi|184153291|ref|YP_001841632.1| metal-dependent hydrolase [Lactobacillus reuteri JCM 1112] gi|227364799|ref|ZP_03848847.1| ribonuclease Z [Lactobacillus reuteri MM2-3] gi|325682576|ref|ZP_08162093.1| ribonuclease Z [Lactobacillus reuteri MM4-1A] gi|166991481|sp|A5VJA0|RNZ_LACRD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808644|sp|B2G6S0|RNZ_LACRJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|148530925|gb|ABQ82924.1| RNAse Z [Lactobacillus reuteri DSM 20016] gi|183224635|dbj|BAG25152.1| metal-dependent hydrolase [Lactobacillus reuteri JCM 1112] gi|227070143|gb|EEI08518.1| ribonuclease Z [Lactobacillus reuteri MM2-3] gi|324978415|gb|EGC15365.1| ribonuclease Z [Lactobacillus reuteri MM4-1A] Length = 309 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 85/300 (28%), Gaps = 91/300 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER + + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVASVALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y +++ Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPVGIKRYVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S + + +YP +E D G I H +I+ G+R Sbjct: 103 SLQ---VSESRLSYP----LHFVEITDDGELFNDHG--FRVIARKLDH-KIACFGYRIEE 152 Query: 179 ----------------------------GNVAYCTDVNAF----------PAESLEKL-- 198 G D P + L Sbjct: 153 ADHPGELQVEKLREQKVPSGPIYGQLKAGKTVTLPDGRVLDGHDFIGTPQPGRIIAILGD 212 Query: 199 -----------QNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 QN D L+ D K + H + ++ + + K +L H+ Sbjct: 213 TRQTKNAILLAQNADVLVHESTFAKDETKMAHNYYHSTSKQAAEIAKKAGVKKLLLNHIS 272 >gi|160942441|ref|ZP_02089747.1| hypothetical protein CLOBOL_07324 [Clostridium bolteae ATCC BAA-613] gi|158434640|gb|EDP12407.1| hypothetical protein CLOBOL_07324 [Clostridium bolteae ATCC BAA-613] Length = 277 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 62/194 (31%), Gaps = 27/194 (13%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 + +H H DHI GI + + R I Y + L + F Sbjct: 68 HIFISHLHLDHIIGIPLFKPL-FQTGRRICFYGESRNGRSLKQQLN-LFIGPPYWPVSLS 125 Query: 138 VNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAF 190 IE +V I ++ +PI H + L +R V Y D Sbjct: 126 QCSASIEYYEVEAGKILSLPLPQSVQILPIRSNHPDQTVL-YRIQLEETMVFYGLDC-EL 183 Query: 191 PAESLEKL----QNLDFLIIDALKNGL-----HSS--HFSLSESLKKIELINPKNAILTH 239 E + L +N LI D ++ H H + +LK E + K LTH Sbjct: 184 NQEMTDVLSNYAENAGLLICD-VQYSPEDYIFHKGWGHSTWEAALKLAEASSAKRIWLTH 242 Query: 240 MHVDLDYDMVLKST 253 D++ + Sbjct: 243 ----FDWEADSSTL 252 >gi|291288725|ref|YP_003505541.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] gi|290885885|gb|ADD69585.1| beta-lactamase domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 255 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 46/188 (24%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 + TH H DH+ G+ + + L + P VY + + + K +D + Sbjct: 52 HLFITHEHHDHVAGL---KPF-LNKFSP-SVYLSEGTAQAISA------KGIDVSQF--- 97 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAE 193 I N V ++ P H LGFRF V + TD+ P + Sbjct: 98 ----YILNGFVEYELEG----FTVHPFNISHDSAEPLGFRFSFGEKVVTFATDLGTVPKD 149 Query: 194 SLEKLQNLDFLIIDA-----------------LKNGLHSSHFSLSESLKKIELI---NPK 233 + L D L++++ + H H S ++LK + I Sbjct: 150 TEYFLCCSDLLVLESNYEPEMLAKGPYSKYLQARIASHKGHLSNRDALKLVGSICDTGVG 209 Query: 234 NAILTHMH 241 L H+ Sbjct: 210 RIFLAHVS 217 >gi|254392588|ref|ZP_05007765.1| ribonuclease Z [Streptomyces clavuligerus ATCC 27064] gi|326440992|ref|ZP_08215726.1| ribonuclease Z [Streptomyces clavuligerus ATCC 27064] gi|197706252|gb|EDY52064.1| ribonuclease Z [Streptomyces clavuligerus ATCC 27064] Length = 302 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 79/295 (26%), Gaps = 85/295 (28%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YVLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V ++ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGVIQRINLDRVPHEVTAHYPESGQR 98 Query: 93 --DGLRGYFLKQK---------------RPIDVYAAPDC-MKHLFESFRYCFKALDDRT- 133 D LR ++ Y + H ESF Y D R Sbjct: 99 FFDRLRYATAYRETVRLTEAPVAADGVLARTPSYTLETARLSHPVESFGYRLVEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P + IE D+ I + A G + + + R A+ D Sbjct: 159 LPERLAAHGIEGPDIGRIQREGALGGVTLDEVSETR--------RGQRFAFVMDT-RLCD 209 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ + H + ++ + ++ +LTH Sbjct: 210 GVHALADGCDLLVIESTFLDEDERLAAEHGHLTAGQAARVARDAGVRHLVLTHFS 264 >gi|56477796|ref|YP_159385.1| cAMP phosphodiesterase [Aromatoleum aromaticum EbN1] gi|56313839|emb|CAI08484.1| cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily [Aromatoleum aromaticum EbN1] Length = 281 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 78/215 (36%), Gaps = 36/215 (16%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ILGC S G I G R+S + +++ ++VD G Sbjct: 24 SQPMKLRILGC--SGG---IGG---------------RASGTTAFLADDD----ILVDAG 59 Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLF- 119 L E +L ID V TH H DHI I L + + P+ VYA + ++ L Sbjct: 60 TGVGELELDE-LLRIDHVFVTHAHLDHIVSIPLLVDSVGELRDTPLTVYATAETIRMLRL 118 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF- 178 F + + D T P + + + V G P+ +H + ++ + Sbjct: 119 HVFNW--QIWPDFTTIPDCHRSYLRFHPVEPGHPIRLGARMVTPLPARHS-VPTVAYCLD 175 Query: 179 ---GNVAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 G + Y D ++ L ++ LI++ Sbjct: 176 SGEGKLVYTGDTEYSTELIAAINALDHVRHLIVET 210 >gi|325279174|ref|YP_004251716.1| Ribonuclease Z [Odoribacter splanchnicus DSM 20712] gi|324310983|gb|ADY31536.1| Ribonuclease Z [Odoribacter splanchnicus DSM 20712] Length = 311 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 34/182 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + TILG G+S+ PT+ +N S+ ++ V ++D Sbjct: 1 MK--FELTILGSGSSI-------------PTSNRN----SAAQVLHV----LGRYFLIDC 37 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMK 116 Q+ R V I+ + +H H DH G+ G Q R + +YA P + Sbjct: 38 AEATQHQLRRFHVPYNKINHIFISHLHGDHFFGLIGFLSTLSLQGRRGEMHIYAEPRLQE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + T+P + + + + + + A P+ + H GF Sbjct: 98 LIGCQMKILHSRF---TFPLFFHAL---SRREEVIYEDKVVTVTAFPL-KHHYDTPVSGF 150 Query: 177 RF 178 F Sbjct: 151 LF 152 >gi|311032222|ref|ZP_07710312.1| metallo-beta-lactamase family protein [Bacillus sp. m3-13] Length = 264 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 55/224 (24%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++D G MQ L + + +L TH H+DHI G+ L +K + Sbjct: 22 EEHSFLIDAGLSGKKMQELFNGIGRKIEDLSGILVTHEHSDHIKGLG-----VLARKYKL 76 Query: 107 DVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +YA M L + + I G ++ Sbjct: 77 PIYANEKTWMAMDGLVGLIP------------------TEQKFNFEIEQVKTFGGLDIQS 118 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + + F V TD + N D + ++ L+ G Sbjct: 119 FGVSHDAAEPMFYSFHDGDKKVVIITDTGYVSDRMKGIISNADAYVFESNHDVQMLQMGH 178 Query: 214 HS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 + H S + +L +++ K L H+ D Sbjct: 179 YPWSIKRRILSDVGHVSNEDAALAMADVMGDKTKRIYLAHLSKD 222 >gi|304385193|ref|ZP_07367539.1| metallo-beta-lactamase [Pediococcus acidilactici DSM 20284] gi|304329387|gb|EFL96607.1| metallo-beta-lactamase [Pediococcus acidilactici DSM 20284] Length = 245 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 32/215 (14%) Query: 53 NTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPI---D 107 +T +++D G +++ + L +DAVL TH H DH + L+ + L +K+ + Sbjct: 28 DTNLLLDAGSATLLELEKHLDPLDLDAVLLTHYHHDHTADLGVLQYRWQLNEKKKVATLP 87 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y D + + P + G ++ Q Sbjct: 88 IYG----------------HTEDPLNFGALTWPNASKGISYQANDVIKVGGLKISFEKTQ 131 Query: 168 HGRISSLGFRFGNVA------YCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSSHF 218 H +++ R VA + +D F + + QN D LI D H Sbjct: 132 H-PVAAFATRIEEVATGKVFTFTSDTRYFAQLA-DFAQNSDLLITDTNFLSDYQGVKWHL 189 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + E+ + + + + I++H+ +D ++L+ T Sbjct: 190 TTKETAQLFDNAHAQRLIISHLSPKIDPKIMLEET 224 >gi|253996366|ref|YP_003048430.1| pyrroloquinoline quinone biosynthesis protein PqqB [Methylotenera mobilis JLW8] gi|253983045|gb|ACT47903.1| coenzyme PQQ biosynthesis protein B [Methylotenera mobilis JLW8] Length = 305 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 97/314 (30%), Gaps = 63/314 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG GA G P+ + CD +RT+SS+ +S V+ + Sbjct: 1 MHIHVLGAGAGGGFPQWNCNCFNCDGLRKGTIKATKRTQSSICVSGDGVNW----VLFNA 56 Query: 61 GPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ L I A++ DH G+ LR K KR ++Y Sbjct: 57 SPDVLQQIQDFAPLQPGRAVRDTGIQAIVLIDAQIDHTTGLFMLRE--GKVKR--EIYCT 112 Query: 112 PDCMKHLFESF-------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 L YC + PI +VP +A + A P Sbjct: 113 DMVYGDLTSGNQILNILGHYCGVNHHN---VPIDGKTSFTIPNVPNLKFTAVALKSAAPP 169 Query: 165 LQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDAL----- 209 H G G + Y + E + D +++D Sbjct: 170 YSPHRNDPHPGDTIGVLIEEISSGKKCWYSPGLGEIEPHLPELMNQADCIMVDGTFWTDT 229 Query: 210 ------------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKS-T 253 ++ H+ F +++++ +L H++ L D ++ Sbjct: 230 EMLDLGLMTKTARSIGHNPQFGKGGMIEELDKFGDVRKVLIHINNTNPILREDSAERAVL 289 Query: 254 PSR-VVPAFDGMQF 266 + A+DGM Sbjct: 290 NEHKIEVAYDGMDI 303 >gi|297621663|ref|YP_003709800.1| ribonuclease Z [Waddlia chondrophila WSU 86-1044] gi|297376964|gb|ADI38794.1| ribonuclease Z [Waddlia chondrophila WSU 86-1044] Length = 301 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 86/311 (27%), Gaps = 78/311 (25%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG C P R + + + R ++ ++ D G Sbjct: 6 ITILG----------------CSSQQPTRFRNQGAYLV-----RWNDEGLLFDPGEGTQR 44 Query: 67 QVLREQVLS--IDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAA---PDCMKHLF 119 Q + V + + +H H DH G+ + L K + Y L Sbjct: 45 QFIFANVSPTCVSRIFISHFHGDHCLGLPSMLMRLNLDKITHTVHCYYPASGQKFFNRLR 104 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----------- 168 Y + + +P + IV+++ I I+ I Sbjct: 105 RGTIY-HETIKIEEHPIHESGIVVDDGHFKIEAAFLEHGIDNIGWRITEPDTRKFDDRQL 163 Query: 169 ----------------GRISSLGFRF-----------GNVAYCTDVNAFPAESLEKLQNL 201 G I+ G R +A D P +E + Sbjct: 164 QNFGISGKMVRELKEKGAITINGARIALDDVSWIRKGDALAVVIDTRKCPQA-IELAKGA 222 Query: 202 DFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVD-LD---YDMVLK 251 LI ++ H H + E+ + + ++ ILTH LD ++ Sbjct: 223 KTLICESTYLDEHRKLAHAHYHMTAKEAAEIAKEAGVQHLILTHFSARYLDSSAFEKEAG 282 Query: 252 STPSRVVPAFD 262 V A D Sbjct: 283 EVFPNVSAADD 293 >gi|110642477|ref|YP_670207.1| ribonuclease Z [Escherichia coli 536] gi|191170037|ref|ZP_03031591.1| ribonuclease Z [Escherichia coli F11] gi|300981142|ref|ZP_07175386.1| ribonuclease Z [Escherichia coli MS 200-1] gi|123049023|sp|Q0TFH3|RNZ_ECOL5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110344069|gb|ABG70306.1| protein ElaC [Escherichia coli 536] gi|190909553|gb|EDV69138.1| ribonuclease Z [Escherichia coli F11] gi|300307663|gb|EFJ62183.1| ribonuclease Z [Escherichia coli MS 200-1] gi|324013131|gb|EGB82350.1| ribonuclease Z [Escherichia coli MS 60-1] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 79/306 (25%), Gaps = 95/306 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 ------------------------------GNVAYCTDVNAFPAESL------------- 195 G D Sbjct: 151 EEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIMLDDGRQINGADYLAAPVPGKALAIF 210 Query: 196 ----------EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH 239 E + +D ++ +A H S ++ I+TH Sbjct: 211 GDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITH 270 Query: 240 MHVDLD 245 + D Sbjct: 271 VSSRYD 276 >gi|170680744|ref|YP_001744468.1| ribonuclease Z [Escherichia coli SMS-3-5] gi|170518462|gb|ACB16640.1| ribonuclease Z [Escherichia coli SMS-3-5] Length = 311 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 108 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|81241825|gb|ABB62535.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 311 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 88/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNITAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLNTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 107 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 108 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 164 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 165 LNAQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 222 Query: 187 VNAFPAESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +D +S H S ++ I+TH+ Sbjct: 223 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 277 Query: 241 HVDLD 245 D Sbjct: 278 SSRYD 282 >gi|218548281|ref|YP_002382072.1| ribonuclease Z [Escherichia fergusonii ATCC 35469] gi|218355822|emb|CAQ88435.1| binuclear zinc phosphodiesterase [Escherichia fergusonii ATCC 35469] Length = 320 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 98/322 (30%), Gaps = 91/322 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ + + D G Sbjct: 16 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQAGL-WLFDCGE 56 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKH 117 Q+L +D + +H H DH+ G+ GL R + P+ +Y + Sbjct: 57 GTQHQLLSTSYNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGSMQ-PLTIYGPKGIQEF 115 Query: 118 LFESF-------RYCFKALDDRT-----------------YPPIVNPIVIENNDVPICMK 153 + + Y ++ +P IE ++ P + Sbjct: 116 VETTLRLSSSWTDYPLDVIEISAGEILDDGLRKVTAYPMEHPLECYGFRIEEHEKPGALD 175 Query: 154 SAGGV---IEAIPILQ--QHGRISSL--------------------GFRFGNVAYCTDVN 188 + G ++ P+ Q + G+ +L FG+ A C Sbjct: 176 AKGLKAAGVQPGPLFQDLKAGKTVTLEDGRQINGADYLAPATPGKVLAIFGDTAPC---- 231 Query: 189 AFPAESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHV 242 +LE ++ D +I +D +S H S ++ I+TH+ Sbjct: 232 ---DNALELARHADVMIHEATLDMSMEAKANSRGHSSTCQAATLAREAGVSKLIITHISS 288 Query: 243 DLDYDMVLKSTPS--RVVPAFD 262 D + + PA D Sbjct: 289 RYDDKGCQRMLQECRDIFPATD 310 >gi|66818853|ref|XP_643086.1| hypothetical protein DDB_G0276531 [Dictyostelium discoideum AX4] gi|60471256|gb|EAL69219.1| hypothetical protein DDB_G0276531 [Dictyostelium discoideum AX4] Length = 956 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 104/315 (33%), Gaps = 75/315 (23%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G S R+ + + ++ +++ DTG Sbjct: 639 ELEIVFLGTGCSQ----------------TSLFRSETCILLNLF----DKGSILFDTGGG 678 Query: 64 FYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRG---------YFLKQKRPI 106 Y Q+ R E + ++ + +H HADH + L Y +KR + Sbjct: 679 AYSQLFRKYGDQKTKEILSTLKFIFISHLHADHHQDLQKLLQVRHLAMDEFYIPFEKRSL 738 Query: 107 DVYAAPDC---MKHLFESFR-YCFKALDDRTYPPIVNPIVI-------ENNDVPICMKSA 155 + + P ++ L +SF Y ++ + I + +++ +K Sbjct: 739 VILSPPGANLYIRDLEKSFTLYNGNNNNNNGFKGIWKYVQFFNFSNYQQDSIFSQFLKKE 798 Query: 156 GGVIEAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII---- 206 G+++ I + H + G V+Y D + +L + ++I Sbjct: 799 LGIVKCIAVSVIHS-FGAHGIMIESENGWKVSYSGDTSYCSE--FVELADNSTIVIHEAT 855 Query: 207 --DALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP--------- 254 D ++ + H + +++K N + ILTH Y V S P Sbjct: 856 FHDCQQDKANQKRHCTFKDAIKAFNQSNSHSTILTHFSQR--YPNVKASLPMKDEDDDDF 913 Query: 255 -SRVVPAFDGMQFSS 268 V AFD + + Sbjct: 914 NQNVSYAFDFLTVNI 928 >gi|297852956|ref|XP_002894359.1| hypothetical protein ARALYDRAFT_474332 [Arabidopsis lyrata subsp. lyrata] gi|297340201|gb|EFH70618.1| hypothetical protein ARALYDRAFT_474332 [Arabidopsis lyrata subsp. lyrata] Length = 833 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 102/338 (30%), Gaps = 92/338 (27%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D ILG G+S P R S++ I S ++++D G Sbjct: 481 RDDMEIVILGTGSSQ----------------PSKYRNVSAIYIDLFS----RGSLLLDCG 520 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY------------FLK 101 Q+ R E V + + +H HADH G+ + + Sbjct: 521 EGTLGQLKRRYGLNGADEAVRKLRCIWISHIHADHHTGLARILALRSKLLKGVTHEPVIV 580 Query: 102 QK-RPIDVYAAPDC-MKHLFESFRYC----------------------------FKALDD 131 RP+ + ++ L F C +++ Sbjct: 581 VGPRPLKRFLDAYQRLEDLDMEFLDCRSTTATSWASLESGGGDAEGSLFSDGSPMQSVFK 640 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG------------RISSLGFRFG 179 R+ P N V+ + S G+ + I H R++S+G R Sbjct: 641 RSDIPTDNSSVLLCLKNLKKVLSEIGLDDLISFPVVHCPQAYGVVIKAAERVNSVGERIL 700 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKIELIN 231 + Y D P +E ++ LI DAL +H + E++ N Sbjct: 701 GWKMVYSGDTRPCPE-IVEASRDATVLIHEATFEDALIEEALAKNHSTTKEAIDVGSSAN 759 Query: 232 PKNAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 +LTH V+ + AFD M + Sbjct: 760 AYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDLMSINM 797 >gi|262199495|ref|YP_003270704.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262082842|gb|ACY18811.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 322 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 65/211 (30%), Gaps = 50/211 (23%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF----RYCFKALDDRTY 134 +L +H H DHI G+ I++YA + + L R+ F Sbjct: 83 ILLSHVHWDHIQGLPFFEP-AYVAGNHIEMYALRNAAEELHHVITGITRHEFFPQHLEQV 141 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN-- 188 P ++ + G A P+L H ++G+R +VAY +D Sbjct: 142 PADFAFHEVKPGE-----PFDVGSFRATPVLLNH-PFGAVGYRLDCDGSSVAYISDTAPF 195 Query: 189 --------------AFPAESLEK-----------LQNLDFLIIDA--LKNG----LHSSH 217 +E L+ D +I D L H H Sbjct: 196 GDVLHKQHFLPGPEELSEADIEALAKLRSDLVATLRGTDTVIYDTHFLPEEYERFPHFGH 255 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + +L+ I+ + +L H +D Sbjct: 256 STPDHALEICTGIDVRRLVL--FHHAPGHDD 284 >gi|14521918|ref|NP_127395.1| metal dependent hydrolase [Pyrococcus abyssi GE5] gi|5459138|emb|CAB50624.1| Metal dependent hydrolase [Pyrococcus abyssi GE5] Length = 270 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 40/220 (18%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR-----GYFLKQKRPI 106 + VD GP ++++R ++ ID + +H H DH + + + G K+ I Sbjct: 32 KNIFVDPGPGALVRMIRYKLDPRKIDVLFISHRHTDHCNDAEVIVEGMTYGVTKKRGTLI 91 Query: 107 D----VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 VY D L + Y +AL+ E + + G E I Sbjct: 92 GSRSVVYGDEDHTPALSK---YHLEALE-------------EVHAPNPGDRFRLGNEEMI 135 Query: 163 PILQQHGRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSS 216 QH +++GFR G+++Y D FP + LI + Sbjct: 136 ITPSQHSDPTTIGFRLKTSLGDISYIADTEYFPEL-VSWHDGSRVLIASVTRPRDMKIPY 194 Query: 217 HFSLSESLKKIELIN--PKNAILTH----MHVDLDYDMVL 250 H S + + ++ + P+ ++TH MH Y Sbjct: 195 HLSTDDIVYMLKAMKQRPEVLVMTHLGMKMHFAGPYKEAQ 234 >gi|293405737|ref|ZP_06649729.1| ribonuclease Z [Escherichia coli FVEC1412] gi|298381420|ref|ZP_06991019.1| ribonuclease Z [Escherichia coli FVEC1302] gi|291427945|gb|EFF00972.1| ribonuclease Z [Escherichia coli FVEC1412] gi|298278862|gb|EFI20376.1| ribonuclease Z [Escherichia coli FVEC1302] Length = 311 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTTFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + I P+ I + + A P+ + G+R Sbjct: 108 --------ETALRISGSWIDYPLEIVEIGAGEILDDGLRKVTAYPLEHP---LECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|83721268|ref|YP_442438.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] gi|167619444|ref|ZP_02388075.1| metallo-beta-lactamase family protein [Burkholderia thailandensis Bt4] gi|257138641|ref|ZP_05586903.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] gi|83655093|gb|ABC39156.1| metallo-beta-lactamase family protein [Burkholderia thailandensis E264] Length = 258 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 32/176 (18%) Query: 42 LKISRVSERGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR 96 + S + T V++D G + ++ R + +DA+L TH H DH+ Sbjct: 14 ALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTHEHGDHVG-----C 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + + V+ V+ ++ +A Sbjct: 69 ALTLARRASLPLYTSWGTARAVGAD-------------EAGVDLRVLWGDE-----TAAV 110 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TDV L D L+++A Sbjct: 111 GDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCDGLVLEA 166 >gi|239917360|ref|YP_002956918.1| metal-dependent hydrolase, beta-lactamase superfamily III [Micrococcus luteus NCTC 2665] gi|239838567|gb|ACS30364.1| metal-dependent hydrolase, beta-lactamase superfamily III [Micrococcus luteus NCTC 2665] Length = 271 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDV 108 +++D G + R + +D +L +H H DH + G+ + + V Sbjct: 40 RILLDLGNGALGVLQRYVDLEDLDGILLSHLHPDHFMDLFGMHVAIRWNPAGWGRGRLPV 99 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-----GVIEAIP 163 Y + E++ ++P + D +AG G P Sbjct: 100 YGPAGTGDRIAEAYG--------------MDPEPGMHQDFEFRCWAAGRTERLGPFRFTP 145 Query: 164 ILQQHGRISSLGFRFGN-------------VAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 + +H + R + Y D +A +E ++ D + +A Sbjct: 146 VPVRHPIDEAYAIRVEVDRVDDDGDVTTRVLTYSGDTDAC-EGLVEAARDADVFLCEAAF 204 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +G+ H + + + + +LTH+ Sbjct: 205 HEGRDDGIDGVHLTGRRAGETAAQAGARKLLLTHL 239 >gi|121638288|ref|YP_978512.1| ribonuclease Z [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990782|ref|YP_002645469.1| ribonuclease Z [Mycobacterium bovis BCG str. Tokyo 172] gi|166991488|sp|A1KL99|RNZ_MYCBP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808649|sp|C1AQX2|RNZ_MYCBT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|121493936|emb|CAL72411.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773895|dbj|BAH26701.1| ribonuclease Z [Mycobacterium bovis BCG str. Tokyo 172] Length = 280 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 82/266 (30%), Gaps = 58/266 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + ++ +VD G Sbjct: 2 LEITLLGTGSPIPDP---------DRAGP-------STLVRAGAQ-----AFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAPDCMKH 117 + + AVL TH H+DHI + + + P+ + P + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEV 100 Query: 118 LF-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + Y D T PP PI + G I P + Sbjct: 101 VEATLKAFGHDIGYRIAHHADLTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS--------- 216 ++GFR +V D P +SL++L D L+ ++ + + Sbjct: 157 TPTIGFRIESDGASVVLAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDI 214 Query: 217 ---HFSLSESLKKIELINPKNAILTH 239 H S+ E+ ++TH Sbjct: 215 CDYHSSVREAAATANRAGVGTLVMTH 240 >gi|85710472|ref|ZP_01041536.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1] gi|85687650|gb|EAQ27655.1| metallo-beta-lactamase family protein [Erythrobacter sp. NAP1] Length = 321 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 49/261 (18%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDA-------VLYTHPHADHIHGIDGLRGYFLK 101 + G+ V+ D G L D +H H DHI G F+ Sbjct: 69 DAGNGAFVVCDMGSGLREFGLDTLRRLSDGNRPKEWHFFLSHLHWDHIMGFPFFVPAFVD 128 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVI 159 + I D + L + ++ ++P + + IE + + G + Sbjct: 129 GAKVIIHAGHADAEEALR-------RQQEEISFPVPFDWLKADIEFRTLETEREYQIGEL 181 Query: 160 EAIPILQQHGRISSLGFRF----GNVA-YCTD----VNAFPAES--LEKLQNLDFLIIDA 208 I Q+H +S G+RF G VA Y TD ++ ES + + + D +I D Sbjct: 182 TVAMIRQEHSH-ASYGYRFKSADGRVAIYSTDAEYKIDKMEDESAMADFMADADLVIADT 240 Query: 209 LKN-------GLHSSHFSLSESLKKIELINPKNAILTH------------MHVD-LDYDM 248 + + H S ++ K L H MH + + Y+ Sbjct: 241 MYSLADSVSMKEDWGHSSNIVAVDLCHEARAKRLALFHHEPTYSDADIQRMHSETIRYEE 300 Query: 249 VLK-STPSRVVPAFDGMQFSS 268 + + T V+ ++DG+ Sbjct: 301 LTRNDTELEVLCSYDGLCVEL 321 >gi|150016614|ref|YP_001308868.1| ribonuclease Z [Clostridium beijerinckii NCIMB 8052] gi|189043781|sp|A6LU82|RNZ_CLOB8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|149903079|gb|ABR33912.1| ribonuclease Z [Clostridium beijerinckii NCIMB 8052] Length = 308 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 92/301 (30%), Gaps = 96/301 (31%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY--M 66 +LGCG G+P R S+ I+ ++VD G M Sbjct: 6 LLGCG--GGMPMPN--------------RFLSATLINYRG-----RKILVDCGEGTQVSM 44 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP---DCMKHLF-- 119 ++ SID + TH H DHI G+ GL G R PI + + ++ L Sbjct: 45 RISNTGFKSIDIICITHIHGDHIVGLPGLLGTIGNSGRTEPITIIGPEGIRETVEKLRVI 104 Query: 120 ---------------ESF-------------------------RYCFK---------ALD 130 ++F YCF Sbjct: 105 ANWLPYEINIIENPKDTFKLFDGNINLDVDISVLELDHSSPCIGYCFYFKRQPKFDVEKA 164 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 ++ P + ++ N+ I + A + + ++ G V+ TD Sbjct: 165 EKNKVPKILWNRLQRNEENIVLDGALYTNDMVTGEERKGI---------KVSIITDTRPI 215 Query: 191 PAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +E + + D+ I + L + + H + E+ N K +LTH Sbjct: 216 -KNIIEFINDSDYFICEGTYGEDKDLPKAIKNKHMTFREAADLALKGNVKKLLLTHFGTA 274 Query: 244 L 244 + Sbjct: 275 M 275 >gi|241895841|ref|ZP_04783137.1| beta-lactamase superfamily I metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313] gi|241870884|gb|EER74635.1| beta-lactamase superfamily I metal-dependent hydrolase [Weissella paramesenteroides ATCC 33313] Length = 266 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 78/238 (32%), Gaps = 52/238 (21%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V+VD G Q+ R + +DA+ TH H+DHI G+ L +K Sbjct: 24 PQHNVLVDAGLSGKKIAGLMAQIGRS-LTDVDALFVTHEHSDHIAGVG-----VLARKYG 77 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +D+YA + +NP ++ + IE+ + Sbjct: 78 MDIYANQKTWTAMQNKIG-------------KINPEQVQLFEPGQTKLMGDLDIESFSVS 124 Query: 166 QQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS-- 215 F N A TD + L+N D ++++A L+ G +S Sbjct: 125 HDAADPQFYAFHHDNKTFAMLTDTGYVNDRIIGMLKNSDAILMEANHDYEMLRMGSYSWP 184 Query: 216 ---------SHFSLSE-SLKKIELIN--PKNAILTHMHVD-----LDYDMVLKSTPSR 256 H S + +L +++ K+ L H+ + L + V Sbjct: 185 LKQRILGDQGHLSNEDGALALTQILGNRTKHVYLGHLSQENNQKPLAHLTVQSVLEEH 242 >gi|120405242|ref|YP_955071.1| beta-lactamase-like protein [Mycobacterium vanbaalenii PYR-1] gi|119958060|gb|ABM15065.1| beta-lactamase-like protein [Mycobacterium vanbaalenii PYR-1] Length = 257 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 81/250 (32%), Gaps = 46/250 (18%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D A S ++ +++D G Sbjct: 4 RITVLGCSGS----VVGPDSPA------------SGYLVTAPDTPP----LVLDFGGGVL 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHLF 119 + R + VL +H HADH + GL + ++ P VY + L Sbjct: 44 GALQRHADPNSVHVLLSHLHADHCLDMPGL--FVWRRYHPTPAPERGVVYGPANTWARLG 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + + + I + ++ G + +P L H S G R Sbjct: 102 AA-----SSPEGGEIDDFTDIFEIRHWRDNQAVE--IGSLTVVPRLVCHPT-ESYGMRIT 153 Query: 180 N-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELI 230 + + Y D + + +E + D + +A + H S +E+ + Sbjct: 154 DPSGATLVYSGDT-GYCDQLIELARGADVFLCEASWTHSPSRPPRLHLSGTEAGRAAARA 212 Query: 231 NPKNAILTHM 240 +LTH+ Sbjct: 213 GVSELLLTHI 222 >gi|152993439|ref|YP_001359160.1| hypothetical protein SUN_1856 [Sulfurovum sp. NBC37-1] gi|151425300|dbj|BAF72803.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 465 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 26/179 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-Y 98 +S I +++D G + E+ I+ V TH H DHI + + Y Sbjct: 18 TSFLIE--------KNIVIDAGNIIKS--MGEECCKIEHVFITHTHFDHIVDLPFIIDSY 67 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFK---ALDDRTYPPIVNPIVIENNDVPICMKSA 155 F + +P+ VYA + + L + Y F + + I N ++ + Sbjct: 68 FNCRTKPLKVYALKENLDTLKQ---YLFNWNISPNFANIKHINNEFSLKFIPIEYGQTIT 124 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKL---QNLDFLIID 207 I+ + H + + GF+ + D E + L +N+ L+ID Sbjct: 125 VDNIKMTAVKANH-TVPTCGFKVEKEDRAFLFSGDT-YLNDELIALLNNDKNISSLLID 181 >gi|218705802|ref|YP_002413321.1| ribonuclease Z [Escherichia coli UMN026] gi|300896943|ref|ZP_07115426.1| ribonuclease Z [Escherichia coli MS 198-1] gi|331663785|ref|ZP_08364695.1| ribonuclease Z [Escherichia coli TA143] gi|254808635|sp|B7N5N4|RNZ_ECOLU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218432899|emb|CAR13793.1| binuclear zinc phosphodiesterase [Escherichia coli UMN026] gi|300359254|gb|EFJ75124.1| ribonuclease Z [Escherichia coli MS 198-1] gi|331059584|gb|EGI31561.1| ribonuclease Z [Escherichia coli TA143] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTTFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + I P+ I + + A P+ + G+R Sbjct: 102 --------ETALRISGSWIDYPLEIVEIGAGEILDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|331658352|ref|ZP_08359314.1| ribonuclease Z [Escherichia coli TA206] gi|331056600|gb|EGI28609.1| ribonuclease Z [Escherichia coli TA206] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 79/306 (25%), Gaps = 95/306 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 ------------------------------GNVAYCTDVNAFPAESL------------- 195 G D Sbjct: 151 EEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIMLDDGRQINGADYLAAPVPGKALAIF 210 Query: 196 ----------EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH 239 E + +D ++ +A H S ++ I+TH Sbjct: 211 GDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITH 270 Query: 240 MHVDLD 245 + D Sbjct: 271 VSSRYD 276 >gi|294812555|ref|ZP_06771198.1| ribonuclease Z [Streptomyces clavuligerus ATCC 27064] gi|294325154|gb|EFG06797.1| ribonuclease Z [Streptomyces clavuligerus ATCC 27064] Length = 316 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 78/290 (26%), Gaps = 84/290 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG + VP T +N R ++ D G Sbjct: 19 ELVVLGT--ASQVP-----------TRHRNHNG--------YVLRWDGEGLLFDPGEGTQ 57 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGI----------------------------DGL 95 Q+LR V ++ + TH H DH G+ D L Sbjct: 58 RQMLRAGVAAHDLNRICVTHFHGDHSLGLAGVIQRINLDRVPHEVTAHYPESGQRFFDRL 117 Query: 96 RGYFLKQK---------------RPIDVYAAPDC-MKHLFESFRYCFKALDDRT-YPPIV 138 R ++ Y + H ESF Y D R P + Sbjct: 118 RYATAYRETVRLTEAPVAADGVLARTPSYTLETARLSHPVESFGYRLVEPDGRRMLPERL 177 Query: 139 NPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK 197 IE D+ I + A G + + + R A+ D Sbjct: 178 AAHGIEGPDIGRIQREGALGGVTLDEVSETR--------RGQRFAFVMDT-RLCDGVHAL 228 Query: 198 LQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ + H + ++ + ++ +LTH Sbjct: 229 ADGCDLLVIESTFLDEDERLAAEHGHLTAGQAARVARDAGVRHLVLTHFS 278 >gi|189460825|ref|ZP_03009610.1| hypothetical protein BACCOP_01472 [Bacteroides coprocola DSM 17136] gi|189432399|gb|EDV01384.1| hypothetical protein BACCOP_01472 [Bacteroides coprocola DSM 17136] Length = 304 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 94/302 (31%), Gaps = 93/302 (30%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S I+ ++D G Sbjct: 2 EKFEVNILGCGSAL----------------PTTRHMATSQVINI-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHL 118 +Q+ R ++ ++ + +H H DH G+ GL F L++ + +Y P+ K L Sbjct: 41 GTQIQLRRSRLKFSRLNHIFISHLHGDHCFGLIGLISTFGMLERTADLHIYCHPELEKLL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 + K + P V ++ I +E IP+ R+ + GF Sbjct: 101 TPHIDFFCKGM-----PYKVIFHTFNPSEQTIIYDDRSVTVETIPLRH---RLPTCGFIF 152 Query: 177 -------------------------RFGN--------------------------VAYCT 185 R N AYC+ Sbjct: 153 REKPTQNHIKRDMIDFYHIPVCMINRIKNGEDYVTEEGTVIPNERLTTPSDPPRSYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P + E+++ +D L +A + H + ++ K I+ H Sbjct: 213 DTAYLPRIT-EQIKGIDLLFHEATFAKTEAARAKQTMHSTAEQAATIARDAQVKRLIIGH 271 Query: 240 MH 241 Sbjct: 272 FS 273 >gi|161950082|ref|YP_404026.2| ribonuclease Z [Shigella dysenteriae Sd197] gi|309785029|ref|ZP_07679662.1| ribonuclease Z [Shigella dysenteriae 1617] gi|308927399|gb|EFP72873.1| ribonuclease Z [Shigella dysenteriae 1617] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNITAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLNTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|314935221|ref|ZP_07842574.1| metallo-beta-lactamase family protein YycJ [Staphylococcus hominis subsp. hominis C80] gi|313656556|gb|EFS20295.1| metallo-beta-lactamase family protein YycJ [Staphylococcus hominis subsp. hominis C80] Length = 263 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++VD G + Q+ R + +++ +L TH H+DHI G+ + ++ Sbjct: 19 ESEKGSLLVDVGLTGKKMEGLFSQIDR-DMKNLNGILVTHEHSDHIKGLG-----VIARR 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA K + + DD+ P+ + + AG IE+ Sbjct: 73 YGLPVYANEKTWKAIEKK--------DDK--IPMDQKFIFNPYE---TKSIAGFDIES-- 117 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGL 213 H I + F TD +Q D + +D L+ Sbjct: 118 FNVSHDAIDPQFYIFHNNYKKFTMITDTGYVSDRMKGMIQGSDAFMFESNHDVDMLRMCR 177 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + + K L+H+ D Sbjct: 178 YPWKTKQRILSDMGHVSNEDAGHAMADVITGHTKRIYLSHLSRD 221 >gi|153832098|ref|ZP_01984765.1| ribonuclease Z [Vibrio harveyi HY01] gi|148871713|gb|EDL70554.1| ribonuclease Z [Vibrio harveyi HY01] Length = 286 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 41/190 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K+R ++ + + ++D G Sbjct: 1 MELYFLGT--SSGVPT-------------KSRNVSATALLESKGKGW----FLIDCGEAT 41 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + + + TH H DH +G+ GL +K P+ + A + + + Sbjct: 42 QHQLLYTPLSLNYLRVICITHIHGDHCYGLPGLLASAGMNNRKDPLTIIAP----EGIKQ 97 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F + + + P + +V G H R + Sbjct: 98 WFE------ATQAFTKLYLPFELHFIEVEQFDSIEIGQFTITATALSH--------RVPS 143 Query: 181 VAYCTDVNAF 190 AYC + + Sbjct: 144 FAYCFEESTI 153 >gi|289422488|ref|ZP_06424331.1| beta-lactamase domain protein [Peptostreptococcus anaerobius 653-L] gi|289157060|gb|EFD05682.1| beta-lactamase domain protein [Peptostreptococcus anaerobius 653-L] Length = 266 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 50/235 (21%) Query: 53 NTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T ++VD G ++ + +D +L TH H+DHI GI L ++ + Sbjct: 22 DTNILVDAGLSGKKITGSLEEIGVDPTKLDGILVTHEHSDHIKGIG-----ILSRRYKLP 76 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y L ++ V+ ++ + + P Sbjct: 77 IYINYKTW-------------LATKSKIGKVDENLVNIFENDKAYN--IKDLLVKPFSIS 121 Query: 168 HGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIID--------------- 207 H +GFRF ++ TD+ + + D +I++ Sbjct: 122 HDASDPVGFRFTNEKDNKISIATDIGHVSENIRKNILGSDLVILESNYDKEMLLMGSYTY 181 Query: 208 ALKNG--LHSSHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 ALK H S ++ K + + ++ +L H+ + ++ + T + + Sbjct: 182 ALKKRVMSDIGHLSNEDAAKFVVDLINNGTEHILLAHLSRENNFPQLAYETSNHI 236 >gi|163760232|ref|ZP_02167315.1| beta-lactamase-like protein [Hoeflea phototrophica DFL-43] gi|162282631|gb|EDQ32919.1| beta-lactamase-like protein [Hoeflea phototrophica DFL-43] Length = 293 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 102/303 (33%), Gaps = 59/303 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG S G P I P P + ++ + +++D G Sbjct: 4 RLVVLG---SKGGPAI-------RPGGP----SPTASLLEI-----GGRRIVIDCGLGVS 44 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA---PDCMKHL 118 ++ + +D V+ TH H+DH+ + L + K P++V+ Sbjct: 45 RGLVEAGMALPQLDLVVITHLHSDHVLELGPLIHTAWTAGLKTPVEVWGPVGTQALWDGF 104 Query: 119 FESFRYCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGF 176 S Y +DD P I + + + + ++S G +EA + +H + Sbjct: 105 LASLAYDIDLRIDDEGRPDICDLVQVSEFGEGVLIESEGLTVEA--LRVEHPPVTECYAI 162 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----------------KNGLH-- 214 + + + + D +P E Q D L+ +A+ + H Sbjct: 163 KISHAGRVIVFSADTAYYPPL-GEFAQGADILVHEAMHPDGVDRLVARTGNGDRLKAHLL 221 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG-MQF-----SS 268 +SH ++ + + +L H+ D + + +DG + S Sbjct: 222 ASHTMAADVGRIATQAQAGHLVLNHLVPADDPQITEADWTRELYATWDGPLTIGRDGLSL 281 Query: 269 PIP 271 P+P Sbjct: 282 PLP 284 >gi|300173019|ref|YP_003772185.1| ribonuclease Z [Leuconostoc gasicomitatum LMG 18811] gi|299887398|emb|CBL91366.1| ribonuclease Z [Leuconostoc gasicomitatum LMG 18811] Length = 314 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 35/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + +H H DHI G+ G R + K P+ +Y + + Sbjct: 43 QHQILKTTIRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGANKNEPLTIYGPKGVKEFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + R P+V ++E + I +H RI + G+R Sbjct: 103 QT----ALRVSETRLSYPVVYTEIVEG------VIFEDKTFRVIAAKMRH-RIETWGYRV 151 Query: 179 G 179 Sbjct: 152 E 152 >gi|323699305|ref|ZP_08111217.1| beta-lactamase domain-containing protein [Desulfovibrio sp. ND132] gi|323459237|gb|EGB15102.1| beta-lactamase domain-containing protein [Desulfovibrio desulfuricans ND132] Length = 250 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 22/217 (10%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLR 96 +SL + +++++++D G + + R + L +DAV +H HADH G+ L Sbjct: 18 NTSLLVEH-----NDSSILLDCGFNVSCGLWRYAARPLDLDAVYVSHFHADHYFGLPALI 72 Query: 97 GYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L++ R + + + + + I + Sbjct: 73 VRSLEEGRTKRLTILGPSGIESRVNRLMELAYSNALAKAG------FEIFFIECVPGEDF 126 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 G L H + L R ++ Y D +++ ++ D ++ +A Sbjct: 127 KHGGFRFRFALNDHS-MPCLAVRLDAGGKSLYYSGDGKP-TDATVDLAEHCDLVVHEAFT 184 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDY 246 ++ H + SL L HM + + Sbjct: 185 LDEITTGHGDVGTSLDMARRSGAGACALVHMKRTIRH 221 >gi|242242776|ref|ZP_04797221.1| ribonuclease Z [Staphylococcus epidermidis W23144] gi|242233912|gb|EES36224.1| ribonuclease Z [Staphylococcus epidermidis W23144] gi|319400845|gb|EFV89064.1| ribonuclease Z [Staphylococcus epidermidis FRI909] Length = 306 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 96/310 (30%), Gaps = 96/310 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + ID + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPKGIQNYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S L + I ++ + + HG I S G+R Sbjct: 103 TSL-----QLSESHL-----NYSITYIEINQQLAYHHNGFTVQAEMLNHG-IPSFGYRIE 151 Query: 180 ------------------------------------NVAYCTD----------VNAFPAE 193 + Y +D + + + Sbjct: 152 APITPGTINVDALRDIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 194 S------LEKLQNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + + N D +I +A L N H SH + + I+ N +++TH Sbjct: 212 TKPCENEYKLANNSDLMIHEATYIEGDKKLANNYHHSH--IDDVFNLIKQANVNKSLITH 269 Query: 240 MHVDLDYDMV 249 + + D V Sbjct: 270 ISNRYNIDEV 279 >gi|315658219|ref|ZP_07911091.1| ribonuclease Z [Staphylococcus lugdunensis M23590] gi|315496548|gb|EFU84871.1| ribonuclease Z [Staphylococcus lugdunensis M23590] Length = 307 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 100/318 (31%), Gaps = 83/318 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGESKPLTLVGPHGIKAFVE 102 Query: 112 ------------PDCMKHLFESFRYC---FKALDDRTYPPIVN-PIVIENNDVPICMK-S 154 P + + F Y FK IV+ +E P + Sbjct: 103 TTLSLSESHLNYPITFIEIDDGFSYHHNGFKVTAKVLNHGIVSYGYRVEAPTTPGKINVE 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAF--PAESLEKL------------- 198 A + P + + F F N+ Y + D P + Sbjct: 163 ALKALGLEPGPKYQEVKDNDTFEFNNIIYKSQDFKGLAKPGPIIAIFGDTKPCANEKIIA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHM---------H 241 Q+ +I +A L N H SH + + + I + K ++THM H Sbjct: 223 QDAQLMIHEATYIEGDKVLANNYHHSH--IDDVFQLIHQAHVKQTLITHMSNRYNKEDIH 280 Query: 242 VDLDYDMVLKSTPSRVVP 259 ++ + + P+ + Sbjct: 281 HIYNHLLQQDNVPNFIFV 298 >gi|313905086|ref|ZP_07838456.1| ribonuclease Z [Eubacterium cellulosolvens 6] gi|313470156|gb|EFR65488.1| ribonuclease Z [Eubacterium cellulosolvens 6] Length = 303 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 100/321 (31%), Gaps = 85/321 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P +R +SL + +++++D G + + Sbjct: 6 LLGTGGMMPLP---------------DRWL-TSLLTRY-----NGSSLLIDCGEGTQITL 44 Query: 69 LREQ--VLSIDAVLYTHPHADHIHGIDGL--------RGYFLKQKRP------------- 105 + ID + +TH HADHI G+ G+ R L P Sbjct: 45 KKNGWTFKPIDIICFTHYHADHISGLPGILLAMANAERSEPLTMIGPKGIGRVVSGLRTI 104 Query: 106 ---ID---VYAAPDCMKHLFESFRY------------CFKALDDRTYPPIVNPIVIENND 147 + Y + + + E Y C+ + + + + Sbjct: 105 APELPFEIEYIELNGPEQVIEKNGYRITAFRVQHNMVCYGYSVEILRTGKFDVERAKALE 164 Query: 148 VPICMKSA---GGVIEAIPILQQHGRISSLGFRFG-NVAYCTDVNAFPAESL-EKLQNLD 202 +P+ + G IE + + R G V YCTD P +++ E + D Sbjct: 165 IPLKFWNPLQKGKTIEENGV-VYTPDMVLGADRKGLKVTYCTDTR--PVKTIAEHAKGSD 221 Query: 203 FLIIDALKNGL-------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM-----VL 250 +I + + H ++ ES + LTH + + V Sbjct: 222 LMIFEGMYGEPEKAEKAKEHKHMTMYESAAIAAEVGSGPLWLTHFSPSMVHPEWFLKDVR 281 Query: 251 KSTPSRVVPAFDG--MQFSSP 269 K P DG ++ + Sbjct: 282 KIYPDTW-LGEDGKFLELNFE 301 >gi|293410631|ref|ZP_06654207.1| ribonuclease Z [Escherichia coli B354] gi|291471099|gb|EFF13583.1| ribonuclease Z [Escherichia coli B354] Length = 311 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 108 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|242242817|ref|ZP_04797262.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis W23144] gi|242233718|gb|EES36030.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis W23144] gi|319400883|gb|EFV89102.1| metallo-beta-lactamase superfamily protein [Staphylococcus epidermidis FRI909] gi|329725326|gb|EGG61809.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU144] Length = 207 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 20/145 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D + Q + +++ I+ A+L TH H DHI +D + +K Sbjct: 19 ENEENVILIDPSSE--SQKIIKKLNQINKPLKAILLTHAHYDHIGALDDII-----EKYQ 71 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VY + D L + + + IE++ P+ + IE Sbjct: 72 VPVYMSKDEFDFLTD------PDKNGSSKFTQYGLSKIESHANPLSLSEGPAEIEGFKFK 125 Query: 166 QQHGRISSLG---FRFGNVAYCTDV 187 H S G F F + A D Sbjct: 126 VLHTPGHSPGSLSFVFNDFAVVGDT 150 >gi|315606166|ref|ZP_07881194.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312124|gb|EFU60213.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 265 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 43/259 (16%) Query: 40 SSLKISRVSERGSNT-----TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGID 93 SS I ++ +++ D GP + + R +DA+ +H HADH+ I Sbjct: 20 SSYLIQARGRDRASGQERTFSLVCDIGPGAFGALWRHVCPRDLDALALSHCHADHMGDII 79 Query: 94 GLRGYFLKQKR----PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 L+ Y P+ + + + + + P + Sbjct: 80 SLQVYRKWGPGSSCPPLSLLGPAQTLSRVRQ---------IEGAAEPERYECEFAFTQLR 130 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----------VAYCTDVNAFPAESLEKL 198 + G + P H + + G R + Y D +E Sbjct: 131 LDHAYEVGPLTVRPYRALH-PVEAFGLRIEGPSEEDPSRTVALFYTGDT-DLCESIIEGA 188 Query: 199 QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST-- 253 + +D L+ + H + + K + TH+ + V Sbjct: 189 RGVDLLLSEVGFTSDETEPDMHMDGRRAGEVARRAGVKRMLATHIQPWTPRERVAAEIRQ 248 Query: 254 ----PSRVVPAFDGMQFSS 268 P A G+Q S Sbjct: 249 TWDGPLGFAAA--GLQVSL 265 >gi|315222669|ref|ZP_07864558.1| ribonuclease Z [Streptococcus anginosus F0211] gi|315188355|gb|EFU22081.1| ribonuclease Z [Streptococcus anginosus F0211] Length = 309 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 87/295 (29%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E + D G Sbjct: 1 MQLQFLGTGAGQ----------------PSKARNVSSLVLKLLDEINEI--WMFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 ++L + I + TH H DHI G+ G R + ++ I++Y Sbjct: 43 QNRILETTIRPRKIRKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDIEIYGPVGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRT------------YPPIVNPIV-----------IENN 146 M L Y F D+++ Y ++ + +E Sbjct: 103 MTSLRVSGSRLPYRIHFHEFDEKSLGKILETDKFTVYAEKLDHSIFCVGYRIMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCT------------DVNAFPA 192 +K+AG + ++G L G + Y + D Sbjct: 163 LDAEKLKAAGLPFGPLFGKVKNGEDVVLEDGTKIIAADYISAPRPGKIITILGDTRK-TN 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAEIAREAGVKRLLLNHIS 276 >gi|146297381|ref|YP_001181152.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410957|gb|ABP67961.1| Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 243 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 79/266 (29%), Gaps = 54/266 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M LG G N +S + ++D Sbjct: 1 MSKENPLKFLGIG----------------SAFNPNY-NNTSAYFEL-----EDNLFLIDC 38 Query: 61 GPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 G L E+ L ++ VL TH H DHI + L Y Q K Sbjct: 39 GGGIFNSLLSLKLLEKYLHLN-VLITHTHPDHIASLGQLILYCYYQLN-----------K 86 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLG 175 + F L+ Y I N I I P + + I + Q H + G Sbjct: 87 KITLIFPQSEIILNLLDYMGIRNDIYI--LKTPQDFVNYLSKLTVISLEQVHVNELPCFG 144 Query: 176 FRF----GNVAYCTDVNAFPAESL-EKLQN-LDFLIID-ALKNGLHSSHFSLSESLKKIE 228 + Y D + P L + L+ +DFL D +N H H S+ E E Sbjct: 145 YLIYLNNVTFYYSGDSKSIPLYILTKFLEGEIDFLFQDTCSENHNHHPHLSIKE---LSE 201 Query: 229 LINP---KNAILTHMHVDLDYDMVLK 251 I P K H+ D ++ Sbjct: 202 QIPPSKRKQVYCMHIDEKFDVNLAKN 227 >gi|194468447|ref|ZP_03074433.1| ribonuclease Z [Lactobacillus reuteri 100-23] gi|194453300|gb|EDX42198.1| ribonuclease Z [Lactobacillus reuteri 100-23] Length = 309 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 32/179 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER + + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVASVALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y +++ Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPVGIKRYVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + +YP +E D G I H +I+ G+R Sbjct: 103 SLQ---VSESRLSYP----LHFVEITDDGELFNDHG--FRVIARKLDH-KIACFGYRIE 151 >gi|299067198|emb|CBJ38394.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum CMR15] Length = 261 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVL----SIDAVLYTHPHADHIHGIDGLR 96 + S+ ++T +++D G V R E++ S+DA+L TH H DHI Sbjct: 16 ALLVESSDGTTSTRILLDCGFGIRETVRRLERLGCAPASLDAILVTHEHGDHIG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--- 153 Y K + V+ + Y + + V C Sbjct: 71 AYAFAAKHSVPVWTSHGT-------------------YRATASLRGADRAAVRFCRADDA 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + +P H L F F + + TD L L +++ Sbjct: 112 FSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLHAFVLEC 170 >gi|242277833|ref|YP_002989962.1| metallo-beta-lactamase family protein [Desulfovibrio salexigens DSM 2638] gi|242120727|gb|ACS78423.1| metallo-beta-lactamase family protein [Desulfovibrio salexigens DSM 2638] Length = 389 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 24/162 (14%) Query: 41 SLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLS------IDAVLYTHPHADHIHG 91 S I G+ ++DTG RE + I+A+ +H H DH G Sbjct: 143 SCLIEVEELDGTMHKYLLDTGWSYEWMNDSFKREGIDKMLKEQQIEALFISHEHWDHFWG 202 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD----DRTYPPIVNPIVIENND 147 + LK I +Y + + + C D D+ PI+ + + D Sbjct: 203 L----PVTLKYDNRIPLYLHDGFYEEGLQYVKDCGYKGDLKIADKPITPIIPGMALLKFD 258 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG------FRFGNVAY 183 VPI + G A + + HG + G +F + AY Sbjct: 259 VPIINRVFGETSLAFNV-KGHGLVLISGCCHQGILKFADFAY 299 >gi|301024047|ref|ZP_07187763.1| ribonuclease Z [Escherichia coli MS 69-1] gi|300396779|gb|EFJ80317.1| ribonuclease Z [Escherichia coli MS 69-1] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 102 ETALRISGSWTDYPLEIVEIGADEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNA 161 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 162 QALKAAGVPPGPLFQALKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 216 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 274 Query: 244 LD 245 D Sbjct: 275 YD 276 >gi|256391401|ref|YP_003112965.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357627|gb|ACU71124.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 246 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 27/202 (13%) Query: 52 SNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPID 107 +++VD G ++L +DAV +H H DH ++ L R + P+ Sbjct: 27 DGFSLLVDAGYAVLPRLLELMPAEQLDAVYISHGHPDHCADLNPLLRARAFGGADPDPLP 86 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA P + + P + + +D + G E L Sbjct: 87 VYAPPRALDAVLA------------LDRPGMLDAALTRHDFEPGAAFSVGPFELRTALLP 134 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSSHFSLS 221 H + + R +V Y D +E + D LI +A + S LS Sbjct: 135 H-WLPNAAVRVAAGGHSVVYTGD-GGPDPALVELARGADTLIAEASYPEVMDADSVRYLS 192 Query: 222 ESLKKIE---LINPKNAILTHM 240 + + +LTH+ Sbjct: 193 TARQVARQASEAGVGRLVLTHL 214 >gi|303227865|dbj|BAJ14763.1| hypothetical protein [planctomycete KSU-1] Length = 255 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 83/253 (32%), Gaps = 52/253 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+G G G+P K R + + ++ DTGP Sbjct: 1 MELTIIGSGT--GMP-------------SKTRAYPCIYL------KIKDKHLVFDTGPGS 39 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPI---DVY-----AAPDC 114 Q+ V +D + YTH H DH + + + ++ +P+ +Y Sbjct: 40 LRQLFLIDVTYLDINHLYYTHFHLDHSLDLASIL-FTMRYNQPVRTQPLYITGPIGLKAF 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L +F K D Y ++ + ++ I + QH + S+ Sbjct: 99 YEKLLSAFGETIKPKDFHVYLKEIDKGELVYDEWKIIAE-----------PLQHS-MQSI 146 Query: 175 GFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS--SHFSLSESLKKI 227 GFR + + Y D + L + ++ L+++ H + + Sbjct: 147 GFRIESPHGKAMVYSGDT-DYCDGILRLAKRVNTLVLECSFPDDQKIQGHLTPRLCAQIA 205 Query: 228 ELINPKNAILTHM 240 ILTH+ Sbjct: 206 HESQCDRLILTHL 218 >gi|86130530|ref|ZP_01049130.1| ribonuclease Z [Dokdonia donghaensis MED134] gi|85819205|gb|EAQ40364.1| ribonuclease Z [Dokdonia donghaensis MED134] Length = 305 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 33/183 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M H TILG C P + + +S + N ++D Sbjct: 1 MSSNLHLTILG----------------CYAAAPGSYKNPTSQVLEI-----RNNLFLIDC 39 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMK 116 G + + R ++ I + +H H DH G+ G+ F LK+ P+ +Y + Sbjct: 40 GEGTQVALRRNKIKFARIKHIFISHLHGDHFFGLMGVITTFSLLKRTAPLTIYGPKGIKE 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + +YP ++ I + + + +++ I I +H RI + GF Sbjct: 100 LILLQLK---LTKGFTSYP--LHFREITSKESEVILENE--EITVTTIPLKH-RIYTNGF 151 Query: 177 RFG 179 F Sbjct: 152 YFE 154 >gi|269123219|ref|YP_003305796.1| beta-lactamase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314545|gb|ACZ00919.1| beta-lactamase domain protein [Streptobacillus moniliformis DSM 12112] Length = 252 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 72/221 (32%), Gaps = 54/221 (24%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + E++ I AV TH H DH+ + L +K I Sbjct: 20 GGVKLLVDIGFSLKKTIEKLESINERLEDIYAVFITHEHIDHVKSLGPLL-----RKTNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D + K ++R +I N + +K+A I Sbjct: 75 LVYIHEDSYNMIKSKLG---KYDEER---------IIFLNKREVYIKNA----CVINFDL 118 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H LGF F Y TD + QN D + I D L +G + Sbjct: 119 THDSEHCLGFSFIENNKKFVYITDAGYVTKAMELQCQNADVIAIESNYDYDLLMSGSYPW 178 Query: 216 ----------SHFSLSESLKKI-----ELINPKNAILTHMH 241 H S + LK + E + K L H+ Sbjct: 179 DIKSRIKSKFGHLSNQDCLKLLKNSYTEKL--KKIFLMHLS 217 >gi|163760407|ref|ZP_02167489.1| metal dependant beta lactamase protein [Hoeflea phototrophica DFL-43] gi|162282358|gb|EDQ32647.1| metal dependant beta lactamase protein [Hoeflea phototrophica DFL-43] Length = 260 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 35/251 (13%) Query: 46 RVSERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + R + +I D G P+ + E V + + ++H H DHI G+ + +L Sbjct: 17 CIEVRCGDHVLIFDAGSGLPNAAKALAAEGVKDFN-LFFSHCHYDHICGLPHFKPMYLPG 75 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV---NPIVIENNDVPICMKSAGGVI 159 I ++ Y + P + + ++ + I Sbjct: 76 FT-IGFWSGHLAGTMTTREMIYGYIRPPWFPVAPDICRASMSTVDFKAGDVLEPFPNLSI 134 Query: 160 EAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE----SLEKLQNLDFLIIDA--- 208 + ++ G I G+R + A TD P E ++ + ++D + D Sbjct: 135 KTGALVHPGGAI---GYRVEWGGRSFAMITDTEHTPGELDPVVMDLISDVDLFLYDTTYL 191 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---DYD-----MVLKSTPSRV 257 ++ H + +++K + K MH D + + Sbjct: 192 EDEIETYRGYGHSTWEQAVKLAQAAGAKRVGF--MHHSPTRTDAELSEIGEMAAKRFEGA 249 Query: 258 VPAFDGMQFSS 268 A++G Sbjct: 250 FCAYEGQTIEI 260 >gi|308069322|ref|YP_003870927.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Paenibacillus polymyxa E681] gi|305858601|gb|ADM70389.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Paenibacillus polymyxa E681] Length = 309 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG A GVP I +R +S+ + + ER + + D G Sbjct: 1 MEFYFLGTNA--GVPTI--------------QRNVTSIALRLLEER--RSMWLFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +VLR ++ ++ + TH H DH+ G+ GL Q P+ VY P +++ Sbjct: 43 QQEVLRSPLKLSRLEKIFITHLHGDHLFGLPGLLSSRAYQGGTTPLTVYGPPGIQEYIEL 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +L ++E+ + G L H RI S G+R Sbjct: 103 -------SLGISQSRINYQLHIVEHTG---GVLFDDGQFRVESALLDH-RIDSYGYRV 149 >gi|300857326|ref|YP_003782310.1| putative metal dependent hydrolase [Clostridium ljungdahlii DSM 13528] gi|300437441|gb|ADK17208.1| predicted metal dependent hydrolase [Clostridium ljungdahlii DSM 13528] Length = 261 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 82/240 (34%), Gaps = 59/240 (24%) Query: 52 SNTTVIVDTG---PDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G +L+ + IDA+L TH H+DHI G+ L +K I Sbjct: 20 DNAKILIDAGLSGKSIENALLKIGHKPNDIDAILVTHEHSDHIKGVG-----VLSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG--VIEAIPI 164 +YA K + +S I+ +++ I + ++ + Sbjct: 75 PIYANTLTWKAMLKSIG------------------KIKEHNIKIIYDNYINIKDMDIVSY 116 Query: 165 LQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H G+ + TD+ + L++ D +++++ LK G + Sbjct: 117 GISHDAADPYGYAVNCKNKKACVATDLGFMSDHIKDILKDSDLILLESNHDVEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKSTPS 255 H S + I I K IL H+ +L Y+ V S Sbjct: 177 PYDLKRRILSKVGHLSNDDCGMVIPDILNGKFKRIILGHLSKINNYPELAYETVTNSLRE 236 >gi|329297123|ref|ZP_08254459.1| ribonuclease Z [Plautia stali symbiont] Length = 303 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 100/313 (31%), Gaps = 79/313 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H T LG GA G P + +R +++ ++ T + D G Sbjct: 1 MHLTFLGTGA--GAPSL--------------QRNVTAIALTL---SKRGETWLFDCGEAT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q +R + ++ + TH H DHI G+ GL R P+ +Y Sbjct: 42 QHQFMRSALKPGKLEKIFITHLHGDHIFGLPGLLTSRSIA-GLTEPVTLYGPKGLRQFVD 100 Query: 116 KHLFESFRYCFKALD--DRTYPPIVN------------------PIVIENNDVPICMKSA 155 L S Y L+ + P+++ IE +D P + + Sbjct: 101 TALSLSGSYTGYPLEIVEIEAGPVLDNGEFRVIAYALNHVVECYGYRIEQHDKPGFLDAP 160 Query: 156 GGVIEAIP-------------ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLE 196 E +P I + GR + G +A D +L+ Sbjct: 161 RLKAEGVPRGPWYQDLKQGKRITLEDGREINGADYLGPATKGKVLAIFGDT-GPTEVALQ 219 Query: 197 KLQNLDFLI----IDA--LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---DYD 247 N D ++ ++A ++ H + ++ + K I TH D + Sbjct: 220 LAANADVMVHETTLEAAMVEKANGRGHSTTVQAASVAQRAGAKRMIATHFSSRYLSQDRE 279 Query: 248 MVLKSTPSRVVPA 260 +L S V PA Sbjct: 280 RLLAECQS-VFPA 291 >gi|303248968|ref|ZP_07335214.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] gi|302489617|gb|EFL49555.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ] Length = 264 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 30/217 (13%) Query: 35 NRRT-RSSLKISRVSERGSNTTVIVDT---------GPDFYMQVLREQVLSIDAVLYTHP 84 + R +SL + V G T+++D G LRE+ DA+ +H Sbjct: 13 DERLPNTSLLVEGVGADGP-RTILLDCGFTAGAAFFGCGALPAALRERGP--DAIWISHF 69 Query: 85 HADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H DH G+ + +Q R P+ VY L + + + P+ V Sbjct: 70 HGDHYFGLPYALTRWHEQGRREPLTVYGGEGMAGKLAALVDMAYPNVRGKLTYPLKGVSV 129 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAES-LEK 197 + + A + HG L R G + Y D P + +E Sbjct: 130 ADGEAFSLAGLPARTALT------GHGA-PCLALRLETADGGLYYSGD--GAPKAACVEL 180 Query: 198 LQNLDFLIIDALKNGLH-SSHFSLSESLKKIELINPK 233 + ++ +A H S++++++ Sbjct: 181 ARGCGLVVQEAYGLAAGIPGHGSVAQAIELAREAGAG 217 >gi|291531466|emb|CBK97051.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium siraeum 70/3] Length = 263 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 90/265 (33%), Gaps = 71/265 (26%) Query: 26 GACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-------LSIDA 78 C + S+ + S + V+VD G F LRE + ++ A Sbjct: 6 PVCSSSKGN------SVFV-----GDSTSGVLVDAGCSFK--ALREGLALCGIPFEAVKA 52 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 VL TH H DH + + ++ + VYA+ + L F I Sbjct: 53 VLVTHEHIDHTKALG-----QITKRTSVPVYASDGTARKL-------FSDKLVEQTAVIH 100 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--RFG--NVAYCTDVNAFPAES 194 I++ V + + H S+G+ +FG VA CTD+ E Sbjct: 101 PLSEIKSVPVDMDIDF---------FHTPHDAAESVGYTLKFGEHKVACCTDLGYVTDEV 151 Query: 195 LEKLQNLDFLIIDA----------------LKNGLHSSHFSLSE--SLKKIELINPK--- 233 + L D + I+A LK + H LS S + + + K Sbjct: 152 KDNLLGSDTVYIEANYDPVLLKGNPKYPPYLKTRISGDHGHLSNGCSAEFCKELVAKGAS 211 Query: 234 NAILTHMHVD-----LDYDMVLKST 253 IL H+ + + Y+ V K+ Sbjct: 212 RLILGHLSQENNSPKMAYEAVEKTL 236 >gi|15678776|ref|NP_275893.1| hypothetical protein MTH751 [Methanothermobacter thermautotrophicus str. Delta H] gi|2621840|gb|AAB85254.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 241 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 25/205 (12%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPID 107 + + +D GP +DAV+ +H H DH + L + ++ Sbjct: 24 AGMNIHIDPGPGALVRSYQFDSDPRKLDAVMVSHSHTDHYTDAEVLIEAMTRGMTRQRGT 83 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPIL 165 + + M+ + P I + + + + G +E Sbjct: 84 ILGSLSVMEGYRD------------WGPCISEYHMRRSRCITLSAGETVDIGDLEVTGTG 131 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-LH-SSHFS 219 HG + +GFR +V+Y +D F + + + D LI ++ G H H Sbjct: 132 TVHGDPTGVGFRLRTDDLSVSYTSDTEYFDGLA-DYHRGADVLISSVIRPGDEHIRGHMC 190 Query: 220 LSESLKKIELINPKNAILTHMHVDL 244 + +K +E + P A++TH+ + + Sbjct: 191 TDDFIKLVEDVKPGIAVMTHLGMKM 215 >gi|307546168|ref|YP_003898647.1| beta-lactamase-like protein [Halomonas elongata DSM 2581] gi|307218192|emb|CBV43462.1| beta-lactamase-like protein [Halomonas elongata DSM 2581] Length = 263 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 76/226 (33%), Gaps = 54/226 (23%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 TT++VD G + L +DA+L TH H DH+ G+ L +K Sbjct: 28 SDGETTLLVDCGFTLKETEQRLGRLGLHPRQLDALLVTHEHGDHLRGVGPLA-----RKH 82 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY P + + + + + P P +K I+ P+ Sbjct: 83 GVPVYLTPGT---------WLAGRIGELPHRHWITP------QSPFRVKG----IDIDPV 123 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + FR + TD+ + +E Q D ++++ L+ G + Sbjct: 124 TVPHDAREPVQFRLSAAGRRLGLLTDLGHPSSHVVEAFQGCDAVVLECNHDVRLLETGPY 183 Query: 215 SS-----------HFSLSESLKKIELINPKNAILTHM--HVDLDYD 247 H + ++ ++ + L H+ +++ Sbjct: 184 PPSLKRRVGGRWGHLANEQAAWLLQRLGLDR--LQHIVCSHLSEHN 227 >gi|237748899|ref|ZP_04579379.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes OXCC13] gi|229380261|gb|EEO30352.1| metallo-beta-lactamase superfamily protein [Oxalobacter formigenes OXCC13] Length = 260 Score = 58.2 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 61/213 (28%), Gaps = 56/213 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 FT LG G S G +SL +S + ++TTV+VD G Sbjct: 1 MRFTSLGSG-SKG----------------------NSLLVSTE-DGLTSTTVMVDCGFGI 36 Query: 65 YMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 R + A++ TH H+DH L ++ I ++ + + L Sbjct: 37 REMTRRLNRAGCEPADLSAIIVTHEHSDHAG-----SALTLAKRYQIPLWMSYGTFQSLG 91 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + F +E N + + H L F Sbjct: 92 KDFS------------------GVELNFCRDGDSFSVNDFQVNAFTVSHDAREPLQFSID 133 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + TD L D L+I+ Sbjct: 134 DGHAKFGMLTDTGQVTPHISNALARCDALMIEC 166 >gi|329114096|ref|ZP_08242860.1| Coenzyme PQQ synthesis protein B [Acetobacter pomorum DM001] gi|326696635|gb|EGE48312.1| Coenzyme PQQ synthesis protein B [Acetobacter pomorum DM001] Length = 303 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 100/309 (32%), Gaps = 80/309 (25%) Query: 19 PRITGDWGACDPTNPKN----RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV------ 68 P+ + AC + RT++SL +S + +++ PD Q+ Sbjct: 16 PQWNSNAPACRRARAGDPAAPSRTQASLAVSGDGQHW----YVLNASPDLRTQINQTPDM 71 Query: 69 -LREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 RE + S I V+ T D I G+ L++++ ++YA + + + Sbjct: 72 FPREGLRSTPISGVVLTSGEIDAITGL-----LTLRERQHFNLYATQPVLDQINANP--I 124 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA--- 182 F ALD P + PI + A +P + G++ + N A Sbjct: 125 FNALDRTLVP-----RRAMQPEHPISLVPA--EFSIMPFIVP-GKVPLYAEKAENPAEIM 176 Query: 183 ------------------YCTDVNAFPAESLEKLQNLDFLIID--------------ALK 210 + ++ D + D K Sbjct: 177 SNGENIGLEITDGHARALFIPGCAMMTDALRNRINGADVVFFDGTLWTDDEMIRAGLGSK 236 Query: 211 NGLHSSHFSLSE----SLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVP 259 G H S+++ ++ ++ K IL H++ ++L +P Sbjct: 237 TGHRMGHMSIADEPDGTIAAFRPLHVKRKILIHINNSNP--ILLADSPERHAVEQAGWDV 294 Query: 260 AFDGMQFSS 268 AFDGM+ S Sbjct: 295 AFDGMKVSL 303 >gi|90109091|pdb|2CBN|A Chain A, Crystal Structure Of Zipd From Escherichia Coli Length = 306 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 85/302 (28%), Gaps = 87/302 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 + LG S GVP RTR +++ ++ S + D G Sbjct: 2 MNLIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 42 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 43 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 102 Query: 113 DCM------------------------KHLFESFRYCFKAL--------DDRTYPPIVNP 140 + L + Y + ++ P +N Sbjct: 103 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNA 162 Query: 141 IVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTDVNA 189 ++ VP AG I Q +G G FG+ C Sbjct: 163 QALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC----- 217 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 218 --DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSR 275 Query: 244 LD 245 D Sbjct: 276 YD 277 >gi|328954658|ref|YP_004371991.1| beta-lactamase domain protein [Coriobacterium glomerans PW2] gi|328454982|gb|AEB06176.1| beta-lactamase domain protein [Coriobacterium glomerans PW2] Length = 280 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 77/215 (35%), Gaps = 53/215 (24%) Query: 56 VIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G ++ R + + A++ TH H+DH+ G+ +K ++A Sbjct: 36 IMIDDGFSRREVLARMHRLGLDETRVRALVLTHEHSDHVSGVG-----VWCRKFDGTIWA 90 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + R+Y + I E D ++ AG + H Sbjct: 91 SAGTAE--------------KRSYLACLPFIRFEAGD---ALEIAG--VRIQTFSTSHDV 131 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 + +G RF + + TD ++ +L+++ L +++ L+ G + Sbjct: 132 ANPIGLRFSCEEDAIGFVTDTGILSEAAMRELRDVRILALESNHDVAMLRGGSYPRMLQD 191 Query: 216 ------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S +++ + + + + H+ Sbjct: 192 RIASSRGHLSNAQAAEAAVDLVGEGTEQIVCMHIS 226 >gi|218700743|ref|YP_002408372.1| ribonuclease Z [Escherichia coli IAI39] gi|254808632|sp|B7NNU8|RNZ_ECO7I RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218370729|emb|CAR18542.1| binuclear zinc phosphodiesterase [Escherichia coli IAI39] Length = 305 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|323487716|ref|ZP_08092974.1| YycJ [Planococcus donghaensis MPA1U2] gi|323398450|gb|EGA91238.1| YycJ [Planococcus donghaensis MPA1U2] Length = 262 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +VD G + +++ +D +L TH H+DHI G+ + +K Sbjct: 18 ENGEHSFLVDAGLSGRKMEELFAAIGKKMSDLDGILVTHEHSDHIKGLG-----IVARKH 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + I V + + G ++ Sbjct: 73 KVPIYANAKTWSAMDGL---------------IGAVPVEQRFHFDMDTVKTFGSMDIESF 117 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + + F ++ TD +Q D + + L+ G + Sbjct: 118 AVSHDAADPMFYVFHADGRKLSLITDTGYVSDRMKGVIQASDSYVFESNHDVGMLQMGRY 177 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + P L+H+ D Sbjct: 178 PWSIKRRILSDVGHVSNEDAAVAMSEVIAEKPTRIYLSHLSKD 220 >gi|325673487|ref|ZP_08153178.1| putative metal-dependent hydrolase [Rhodococcus equi ATCC 33707] gi|325555508|gb|EGD25179.1| putative metal-dependent hydrolase [Rhodococcus equi ATCC 33707] Length = 219 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 65/197 (32%), Gaps = 26/197 (13%) Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAP 112 D GP + + +L +H HADH + GL ++ P VY Sbjct: 2 DFGPGVLGALQKHADPGEATILLSHLHADHCLDMPGL--LVWRRYHPTPPSGRALVYGPT 59 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 D + + C LDD + I+ + G I H Sbjct: 60 DSACRIGVASAECGGELDDIS-------DTIDLRSWSDGHVAEIGEIAVQAFRVNHPP-E 111 Query: 173 SLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSES 223 S GFR + +AY D ++ ++ D L+ +A + H S +E+ Sbjct: 112 SYGFRVTSKAGRVLAYTGDT-GMCDAVVDLARDADVLLSEASWTHSPDRPEGIHLSGTEA 170 Query: 224 LKKIELINPKNAILTHM 240 + +LTH+ Sbjct: 171 GRVAARAGVGELLLTHI 187 >gi|332171580|gb|AEE20835.1| ribonuclease Z [Krokinobacter diaphorus 4H-3-7-5] Length = 305 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 108/335 (32%), Gaps = 97/335 (28%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M H TILG A P++ KN +S + N ++D Sbjct: 1 MSSNLHLTILG-------------CYAAAPSSFKN---PTSQVLDI-----RNHLFLIDC 39 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMK 116 G + + R ++ I + +H H DH G+ G+ F LK+ P+ +Y + Sbjct: 40 GEGTQVALRRNKIKFSRIKHIFISHLHGDHFFGLMGVITTFSLLKRTAPLTIYGPKGLKE 99 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + +YP + + I + + + + ++ IP+ RI + GF Sbjct: 100 IILLQLK---ITQGFTSYP--LQFVEITSKEPTVIYEDDEVMVTTIPLKH---RIYTNGF 151 Query: 177 RF------------------------------GNV-----------------------AY 183 F G++ AY Sbjct: 152 YFQEKPGERKLDINACLNYEIDKAYYSKIKQGGDITLDDGTLIPNDKLTFDPSKPKSYAY 211 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLH-----SS-HFSLSESLKKIELINPKNAIL 237 C+D A+ +++ L +A H + H + +++ + E ++ +L Sbjct: 212 CSDT-AYKEPIATQIKGATVLYHEATFLESHAHLCKPTGHSTAAQAAQIAEKAEVESLVL 270 Query: 238 THMHVDLD----YDMVLKSTPSRVVPAFDGMQFSS 268 H + + + V+ DG +F+ Sbjct: 271 GHYSIRYGDLNLFAEEARPHFENVLLGDDGKEFTF 305 >gi|325496695|gb|EGC94554.1| ribonuclease Z [Escherichia fergusonii ECD227] Length = 305 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 98/322 (30%), Gaps = 91/322 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQAGL-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKH 117 Q+L +D + +H H DH+ G+ GL R + P+ +Y + Sbjct: 42 GTQHQLLSTSYNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGSMQ-PLTIYGPKGIQEF 100 Query: 118 LFESF-------RYCFKALDDRT-----------------YPPIVNPIVIENNDVPICMK 153 + + Y ++ +P IE ++ P + Sbjct: 101 VETTLRLSSSWTDYPLDVIEISAGEILDDGLRKVTAYPMEHPLECYGFRIEEHEKPGALD 160 Query: 154 SAGGV---IEAIPILQ--QHGRISSL--------------------GFRFGNVAYCTDVN 188 + G ++ P+ Q + G+ +L FG+ A C Sbjct: 161 AKGLKAAGVQPGPLFQDLKAGKTVTLEDGRQINGADYLAPATPGKVLAIFGDTAPC---- 216 Query: 189 AFPAESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHV 242 +LE ++ D +I +D +S H S ++ I+TH+ Sbjct: 217 ---DNALELARHADVMIHEATLDMSMEAKANSRGHSSTCQAATLAREAGVSKLIITHISS 273 Query: 243 DLDYDMVLKSTPS--RVVPAFD 262 D + + PA D Sbjct: 274 RYDDKGCQRMLQECRDIFPATD 295 >gi|51893463|ref|YP_076154.1| metal-dependent hydrolase [Symbiobacterium thermophilum IAM 14863] gi|51857152|dbj|BAD41310.1| metal-dependent hydrolase [Symbiobacterium thermophilum IAM 14863] Length = 244 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 30/201 (14%) Query: 53 NTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ---KRPID 107 +++D GP +Q+ + + AVL +H H DHI + L+ Q + P+ Sbjct: 28 GVALMLDGGPGTVARLQM-QVPAAHLTAVLVSHLHHDHIADLHCLQYLMADQAPGREPLP 86 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP-IVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA D R P + +P+ A G + Sbjct: 87 IYAPG-------------GDNPDRRWLEPSSFGARWVRLLPLPVDEGLAVGPLRVTFART 133 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID----ALKNGLHSSHF 218 H R + + Y D A + + D LI + A H Sbjct: 134 DHPE-PCWAMRITDGCRTLVYTADTGAGVDLA-PFARGADLLIAESTFVAANGQNRRGHL 191 Query: 219 SLSESLKKIELINPKNAILTH 239 + +E+ +LTH Sbjct: 192 TAAEAADLALRAGVGRLLLTH 212 >gi|229823262|ref|ZP_04449331.1| hypothetical protein GCWU000282_00560 [Catonella morbi ATCC 51271] gi|229787428|gb|EEP23542.1| hypothetical protein GCWU000282_00560 [Catonella morbi ATCC 51271] Length = 269 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 56/241 (23%) Query: 38 TRSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHA 86 R S+ S S ++VD G Q+ R V +DA+L TH H Sbjct: 8 LRFSILASGSSGNVTYVESDRQRLLVDAGLSGKKIESLMAQIDRS-VADVDAILVTHEHK 66 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DHIHG+ L +K + VYA + + D + Sbjct: 67 DHIHGVG-----VLSRKYNLPVYANKATWQAM-----------DGMLGAIDPDNRRELEP 110 Query: 147 DVPICMKSAGGVIEAIPILQQHGRI--SSLGFRFGN--VAYCTDVNAFPAESLEKLQNLD 202 D + G ++ + H F+ G+ TD L+N + Sbjct: 111 DQLVTF----GDLDVLTYQVSHDAAMPQFYAFQQGDKQFVMLTDSGYVSERLRSLLKNAN 166 Query: 203 -FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELINP--KNAILTHMHV 242 +LI I+ L+ G + H S + +L ++++ ++ L H+ Sbjct: 167 AYLIESNHEIEMLRYGAYPWSLKQRILGDKGHLSNEDGALAMVDMLGASTQDIYLGHLSK 226 Query: 243 D 243 + Sbjct: 227 E 227 >gi|126460370|ref|YP_001056648.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250091|gb|ABO09182.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548] Length = 235 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 41/224 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ +++D G Y ++ + + D + +H H DHI G+ + R + + + Sbjct: 26 TDINLLLDAGEGTYARLAQCGLPFPDVIYISHRHGDHILGVPTFLLMARRLGRKVKIVGS 85 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND------VPICMKSAGGVIEAIPIL 165 + + + A+ + + +IE +D + + + + Sbjct: 86 AEVLDAVKNL------AVITGIENALPHAELIEAHDKVKIGNTVMSFAPTEHPVHTLAVR 139 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI----------IDALKNGLHS 215 +HG + Y +D +E + D L +A + G Sbjct: 140 VKHGGKC--------LVYSSDTAPV-DTVVELSKGCDLLAHEVSGNPGQEEEARRVG--- 187 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 H + +++++ K M + + + + P V Sbjct: 188 -HSTTADAVEIALRAGVK------MLMPIHFYIEQPIVPPGVTL 224 >gi|19553708|ref|NP_601710.1| metal-dependent hydrolase [Corynebacterium glutamicum ATCC 13032] gi|62391348|ref|YP_226750.1| beta-lactamase superfamily hydrolase [Corynebacterium glutamicum ATCC 13032] gi|145296505|ref|YP_001139326.1| hypothetical protein cgR_2416 [Corynebacterium glutamicum R] gi|21325279|dbj|BAB99901.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Corynebacterium glutamicum ATCC 13032] gi|41326689|emb|CAF21171.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Corynebacterium glutamicum ATCC 13032] gi|140846425|dbj|BAF55424.1| hypothetical protein [Corynebacterium glutamicum R] Length = 255 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 51/285 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG +S VP +S + VI+D GP Sbjct: 1 MRLTILG--SSGSVPAPGN---------------PAS---GYLLTSPDAPAVIMDMGPGV 40 Query: 65 YMQVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHL 118 ++E DA V+++H H DH L + K ++ D L Sbjct: 41 LA-AVQEIQDPADAHVIFSHLHTDHCADFASLMVWRRFHPTLAAKSRNLLFGPEDTPNRL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + + + P H I + R Sbjct: 100 GR-----LSSDEPDGVDDMSDTFAFDAWEERKP--ELIDNFTVTPFRVVH-PIETYALRV 151 Query: 179 G------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHSSHFSLSESLKKI 227 ++ Y D +A+ ++ +N+D + +A + H ++ + Sbjct: 152 EEHRTGASITYSGD-SAYTEALIDAARNVDIFLCEATWGTSCDDKAPGMHMCGQDAGRIA 210 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 K I+TH+ +D + + + + A GM Sbjct: 211 AAAGVKKLIITHVPPWIDAEATVAAAAEHFDGPIELARSGMVIEF 255 >gi|302524147|ref|ZP_07276489.1| hypothetical protein SSMG_00529 [Streptomyces sp. AA4] gi|302433042|gb|EFL04858.1| hypothetical protein SSMG_00529 [Streptomyces sp. AA4] Length = 246 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 73/220 (33%), Gaps = 41/220 (18%) Query: 1 MKDYYHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 M T+LG CGA P AC + +S + V++D Sbjct: 1 MTAMPRLTVLGSCGA---WPEAG---RAC-----------AGFLLSHQ-----DFHVVLD 38 Query: 60 TGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMKH 117 G Q+ R +DAV+ TH H DH+ + L R R + +Y P + Sbjct: 39 LGYGAAPQLFRHVPADRLDAVVVTHEHPDHLADVSALGRARHYTTDRKLPMYCTPGTVDR 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG--RISSLG 175 L P + + D + +P + R+++ G Sbjct: 99 LAAM----------EPSPAPEEIFDLHDLDPETDLGPFRLTTALLPHHVPNYGVRLTTSG 148 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 + +AY D P + + ++ D L+ +A G Sbjct: 149 Y---TLAYTGDTEPAPHLT-DLARDADVLLCEATWQGAPP 184 >gi|150396128|ref|YP_001326595.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150027643|gb|ABR59760.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 555 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 71/216 (32%), Gaps = 58/216 (26%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 GS ++VD G F + L E+ ++ A++ TH H DH ++ Sbjct: 28 GRPGSRQWIMVDCGVTFPGPDLPGVDLVLPDIAFLAEERRNLKAIIITHAHEDHYGALND 87 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L + VYA+P L +A + +++PI + Sbjct: 88 LWP-----GLNVPVYASPFTAGMLEAK-----RAFEKSR------------SEIPITIFK 125 Query: 155 AGGVIEAIPIL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL------- 198 G I P H + G V + D SL L Sbjct: 126 QGDRINVGPFSVEAVGVNHSIPEPMALIIRTQLGTVVHTGDWKIDLEPSLGPLTDEKRLR 185 Query: 199 ----QNLDFLIID---ALKNGLHSSHFSLSESLKKI 227 + + LI D AL+ G+ S +SESL KI Sbjct: 186 QIGEEGVLALICDSTNALREGVSPSERQVSESLSKI 221 >gi|73945502|ref|XP_849493.1| PREDICTED: similar to Zinc phosphodiesterase ELAC protein 1 (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29) isoform 2 [Canis familiaris] Length = 374 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P +S + R + D G Sbjct: 2 SMDVTFLGTGAAYPSPTRG-----------------ASALVLRC----EGECWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVTKQPIEIYGPAGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ + + + +P +V+ +V + P Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCP 131 >gi|315636886|ref|ZP_07892110.1| metal dependent phosphohydrolase [Arcobacter butzleri JV22] gi|315478716|gb|EFU69425.1| metal dependent phosphohydrolase [Arcobacter butzleri JV22] Length = 777 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 39/201 (19%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDC 114 +I+DTG +L ++ I+ + TH H+DHI + L +F +K + +YA+ + Sbjct: 28 IIIDTGNVI--NILGDKSSLINHIFLTHSHSDHIADLPFLLDSFFENRKETLTIYASKET 85 Query: 115 MKHLFESFRYCFKALDDRTYPPI---------VNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++ L E + F + I + I+ N+ I I A I Sbjct: 86 IEVLKE---HTFNDKVWPDFSKINLIGSEKKSLAFKEIKENEETIIDNYKIKAINATHIE 142 Query: 166 QQHGRISSLGFRF---GNVAYC--TDVNAFPAESLEKL---QNLDFLIIDALKN------ 211 S GF AY D + ++++ Q + LII+ Sbjct: 143 ------GSFGFVITKDEKEAYIISGDT-YINEKIIQEINLNQKIKLLIIECSFPNKMEKL 195 Query: 212 ---GLHSSHFSLSESLKKIEL 229 H + +L E L KI Sbjct: 196 AFDSKHLTPNTLKEMLNKINR 216 >gi|239636830|ref|ZP_04677829.1| ribonuclease Z [Staphylococcus warneri L37603] gi|239597504|gb|EEQ80002.1| ribonuclease Z [Staphylococcus warneri L37603] Length = 306 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 58/301 (19%), Positives = 96/301 (31%), Gaps = 74/301 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQAIAL---NLEPYSNSIWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTLIGPKGIQKYIE 102 Query: 112 ------------PDCMKHLFESFRYC---FKALDDRTYPPIVN-PIVIENNDVPICMK-S 154 P + ES Y F + I++ IE P + Sbjct: 103 TTLTLSESHLNYPITYIEIDESLNYHHDGFTVQAEMLNHGIISYGYRIETPTTPGTIDVD 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTD----------VNAFPAESLE------KL 198 A I P + ++ F F Y +D V A ++ Sbjct: 163 ALKAIGLEPGPKYQEVKTNDTFEFNGKIYQSDEFKGEAKSGPVVAIFGDTKPCPNEHIIA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 + D ++ +A L N H SH + + I N K++++THM + + Sbjct: 223 NDADIMVHEATYIEGEKTLANSYHHSH--IDDVFDLIRQSNVKHSLITHMSNRYTKEEIE 280 Query: 251 K 251 Sbjct: 281 N 281 >gi|225420270|ref|ZP_03762573.1| hypothetical protein CLOSTASPAR_06613 [Clostridium asparagiforme DSM 15981] gi|225041087|gb|EEG51333.1| hypothetical protein CLOSTASPAR_06613 [Clostridium asparagiforme DSM 15981] Length = 278 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 85/260 (32%), Gaps = 37/260 (14%) Query: 17 GVPRITGD--WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY---MQVLRE 71 V A P R + S S N +I+D G + R Sbjct: 10 QVTCWGCRGSCPA-----PYENRLQFGGNTSCYSVEAGNELLILDGGTGLAGLGETLARR 64 Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA----APDCMKHLFESFRYCFK 127 + +L++H H DHI GI + + +R I +Y + L + Sbjct: 65 GDVKTITILFSHLHLDHISGIPFFKPLYQP-ERTIHIYGGEERPGELRSSLEAVMGPPYW 123 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAY 183 + + P + +E + GG+I GR +L +R + Y Sbjct: 124 PVSLKDCPARLEYRSLEEGQRAV---LPGGIILETMRANHPGR--TLLYRITAGNKKIVY 178 Query: 184 CTDVNAFPAESLEKL----QNLDFLIIDALKNGL-----HS--SHFSLSESLKKIELINP 232 D ++ +E L ++ D +I DA + H H + + ++ + Sbjct: 179 GLDC-EMDSQVMEALAHFARDADLMICDA-QYSPEDYPGHRGWGHSTWQDGVRLAKRCGA 236 Query: 233 KNAILTHMHVDLDYDMVLKS 252 K +H + D +LK Sbjct: 237 KKVCFSHFAWEYDDRDLLKM 256 >gi|254514783|ref|ZP_05126844.1| ribonuclease Z [gamma proteobacterium NOR5-3] gi|219677026|gb|EED33391.1| ribonuclease Z [gamma proteobacterium NOR5-3] Length = 375 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 80/247 (32%), Gaps = 39/247 (15%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYT 82 GA P N + IVD G D + R SI+AV T Sbjct: 74 CGAGGPLPAPNASGPCVAVV------AGKRLFIVDAGTDGLRNLGRMGYAAGSIEAVFLT 127 Query: 83 HPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFE-SFRYC------FKALDDR 132 H H+DHI G+ L R P+ VY + + + Y D Sbjct: 128 HFHSDHIDGLGELATIRWVSAANTEPLPVYGPMGVTQVVGGFNMAYALDEQYRHAHHGDT 187 Query: 133 TYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRI-SSLGFRFG----NVAY 183 PP + + P + ++ + H I ++G+RF ++ Sbjct: 188 VAPPSGAGMTAKPFAAPATGTLTTLFDEADLKVEALAVNHAPIKPAVGYRFTYKDRSLLI 247 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIE-LINPKNAILTHMHV 242 D + + Q +D LI +AL L + E+ + + I K + Sbjct: 248 SGDTSK-QDNIRQFSQGVDLLIHEALAPNL---VNMMHEAAEAADNEILAK------ITH 297 Query: 243 D-LDYDM 248 D LDY Sbjct: 298 DILDYHT 304 >gi|290961392|ref|YP_003492574.1| hypothetical protein SCAB_70421 [Streptomyces scabiei 87.22] gi|260650918|emb|CBG74035.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 249 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 86/257 (33%), Gaps = 47/257 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG + PR +S + RG + VD G Sbjct: 2 SLSLTVLGTASPY--PRPG---------------RPASGYL----LRGGGAEIWVDAGFG 40 Query: 64 FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----RPIDVYAAPDCMKHL 118 + ++ R + A+ +H HADH + F P+ VYA C + L Sbjct: 41 TFAELQRHTDPTRLTAIWISHLHADHTSDLAAAAYGFAFGGLTLPAPLPVYAPDGCAERL 100 Query: 119 FESFRYCFKALDDRT--YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRISSLG 175 F + P+ + + + ++ + ++ +EA + GR+ Sbjct: 101 AGFFGRPDTTFLKSVFDFRPLYDGHTVRHWNLTLTARAVVHDVEAYGLRAACQGRV---- 156 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQ-NLDFLI----IDALKNGLHSSHFSLSESLKKIELI 230 AY D P E+L +L D + +D ++G H + E+ + Sbjct: 157 -----FAYSGDSG--PCEALSRLAGGADLFLCEADVDTHRDGEPRVHLTPEEAGTYAKS- 208 Query: 231 NPKNAILTHMHVDLDYD 247 ++TH+ L + Sbjct: 209 -ASRLLITHVGPTLTRE 224 >gi|302877124|ref|YP_003845757.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307687819|ref|ZP_07630265.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302579981|gb|ADL53993.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 260 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 80/235 (34%), Gaps = 51/235 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G + + + E I + TH H DHI G+ L +K I Sbjct: 20 EHGKILVDAGLSGKYIEKALIDIEENPRDIAGIFITHEHTDHIKGVG-----VLSRKYNI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++A L S + + N V I + + Sbjct: 75 PIFANELTWGKLESSLG-----------------KLKDENKVIIDKQKEIKDLLITRFDT 117 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H ++S GF VA TD+ F +E +++ D LI ++ +K G + Sbjct: 118 PHDAVASSGFTVQSGNKKVAIVTDIGHFSSEIKNTIKDSDIVLIESNHDVEMVKFGPYPY 177 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 H S + + I I K+ IL H+ + +Y + T + Sbjct: 178 MLKKRILSNVGHLSNDDCGRAILDIMDHKQKHIILGHLSNNNNYPDLAYETVKNI 232 >gi|126309440|ref|XP_001373514.1| PREDICTED: similar to ELAC2 [Monodelphis domestica] Length = 835 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 102/296 (34%), Gaps = 60/296 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ P R SS ++ S++ ++++D G + Sbjct: 488 EVIFLGTGSAI----------------PMKIRNVSSTLVNISSDQ----SLLLDCGEGTF 527 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYA 110 Q+ R +D AV +H HADH G+ + P+ + A Sbjct: 528 GQLCRHYGDQVDTILGNIAAVFVSHIHADHHTGLLNIL-LQRNHALASMGKSSSPLLLIA 586 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EAIPI 164 M L + +C + LD P P+ + ++ E Sbjct: 587 PTQVMTWLQQYHDHCQEILDAINMIPAKCLQKGTEVSKPMIARLVTSLLEKYDLEEFQTC 646 Query: 165 LQQHGRI---SSLGFRFG-NVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALKNGLH 214 L H + + + G + Y D P ++L KL + LI D L+ Sbjct: 647 LVHHCKNAFGCAFAHKSGWKIVYSGDT--MPCDALVKLGKGATMLIHEATLEDGLEEEAR 704 Query: 215 -SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 +H + S+++ +N K +L H Y + +P +V AFD M+ Sbjct: 705 EKTHSTTSQAIGVGVKMNAKFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHMKV 758 >gi|331695370|ref|YP_004331609.1| beta-lactamase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326950059|gb|AEA23756.1| beta-lactamase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 262 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 79/272 (29%), Gaps = 54/272 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S D A S T V+VD G Sbjct: 1 MRLTVLGCSGSG----PGPDSPA-----------------SGYLVDAGGTRVVVDLGNGT 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-----------RPIDVYAAP 112 + R +DAV+ +H H DH + ++ RP+ VYA Sbjct: 40 VGALQRHLDPWELDAVVLSHLHPDHCA---DASALVVHRRYHPFPPFDATARPLPVYAPA 96 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + L ++ + + + + + G + H Sbjct: 97 EAPERLGAAYAPSAAERAETDLTDVCAFHPLTDGAT----ATIGTDVLLRAGAVDH-PCE 151 Query: 173 SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--------LHSSHFSL 220 + R + + Y D A +E + D L+ +A H S Sbjct: 152 AYAIRLEHGGRTLVYSGDT-GPSAGLVETARGADVLLCEATWPHVTQWWDEPPPGVHLSG 210 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 ++ + +LTH+ V D + +L Sbjct: 211 RQAGEHAAAAGVGRLLLTHVPVWFDGEALLAE 242 >gi|323466675|gb|ADX70362.1| Ribonuclease Z [Lactobacillus helveticus H10] Length = 312 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + P+ +Y P + + Sbjct: 43 QHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPPGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP +E + + G H RI S GFR Sbjct: 102 VSLK---VSRTKVSYP----IKFVELTKPGLICEDKG--FRVYTDRLDH-RIPSFGFRV 150 >gi|110799559|ref|YP_696056.1| ribonuclease Z [Clostridium perfringens ATCC 13124] gi|123148750|sp|Q0TQN4|RNZ_CLOP1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110674206|gb|ABG83193.1| ribonuclease Z [Clostridium perfringens ATCC 13124] Length = 316 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 86/304 (28%), Gaps = 91/304 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LG G G+P NR +S V +++D G Sbjct: 2 LNVILLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R D+Y + ++ Sbjct: 41 QVTMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPKGIKEVIEG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIV-IENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + Y L+ + +V E ++ + + + H LG+ Sbjct: 101 FLITLPYLPYKLNILEDASNLEFMVKKEKMELVEEDEKISSDLSIKTLELDHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNLEKALMNKVPKEVWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P E + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTEDIPGFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLAKRGQVKELLL 277 Query: 238 THMH 241 TH Sbjct: 278 THFS 281 >gi|328869903|gb|EGG18278.1| hypothetical protein DFA_03772 [Dictyostelium fasciculatum] Length = 899 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 28/239 (11%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVL-------YTHPHADHIHGIDGLRGYFLKQK 103 + +++D G + Q+ R ID VL +H HADH G G+ L+ + Sbjct: 587 TGAGMLLDAGEGTFGQMSRFYGPDKIDYVLAGLRVIWISHLHADHHLGTPGILQKRLELE 646 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--GVIEA 161 + ++ P + + K R I I N++ + G++E Sbjct: 647 KRDNIKLPPVIVIAPQSIITWLNKTDKVRPLGHIGISIDRMANEIKTLKPALIDLGIVEI 706 Query: 162 IPILQQH-----GRISSL--GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-----L 209 I + H G + +L GF+F Y D P + E ++ D L+ +A L Sbjct: 707 INVPVIHCYKAFGIVVTLKNGFKF---TYSGDTRPCPLLASEG-KSSDVLLHEATMSDDL 762 Query: 210 KNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQF 266 H ++ E+LK + + K ILTH + ++ +R AFD +Q Sbjct: 763 WEEAIKKRHSTVGEALKVGKDMGAKFTILTHFSQRYPKMPQLEQNQRARFGLAFDLLQV 821 >gi|294495706|ref|YP_003542199.1| beta-lactamase [Methanohalophilus mahii DSM 5219] gi|292666705|gb|ADE36554.1| beta-lactamase domain protein [Methanohalophilus mahii DSM 5219] Length = 253 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 92/288 (31%), Gaps = 64/288 (22%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG G ++ P R +S + + + ++ D G Sbjct: 3 SMKIQFLGSGVAIPWP----------------GRVQSGIAVETE----NGRLLLFDCGAG 42 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDC---M 115 ++ +DA++ TH H DH+ + L R K I Y + Sbjct: 43 VLQRLFESGRDPRDVDAIILTHLHLDHVADVLPLLKSRWLCEKSDCVI--YGPHGTRDWL 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + Y + D + I + + A GV H + SLG Sbjct: 101 DGLIGLYPYL-QGRFDLCVTELTPGRQITLDGSDCRLSCAAGV---------HS-VPSLG 149 Query: 176 FRFGN----VAYCTDVNAFPAES-LEKLQNLDFLIIDALKN-----GLHSSHFSLSESLK 225 +R + + Y D P +S +E Q D LI + H++ E L+ Sbjct: 150 YRLEDGGKIMVYAGDTQ--PCDSLMELAQGADVLIHECSFPLGFDVDCHTT----PEMLE 203 Query: 226 -KIELINPKNAILTHMHVDLD------YDMVLKSTPSRVVPAFDGMQF 266 ++ ++ LTH++ + + + V A D ++ Sbjct: 204 PYLDKLDVGKLYLTHLYPQMQGREQEALEYLRSRFKGEVHIASDLLEI 251 >gi|241154959|ref|XP_002407418.1| zinc phosphodiesterase, putative [Ixodes scapularis] gi|215494115|gb|EEC03756.1| zinc phosphodiesterase, putative [Ixodes scapularis] Length = 692 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 106/309 (34%), Gaps = 77/309 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG ++ +P K+R S + + E +++D G Sbjct: 415 SSYPEIVFLGTASA--IP-------------GKDR--NVSAVLVNLRED---LCILLDCG 454 Query: 62 PDFYMQVLRE-QVLSIDAVLYT-------HPHADHIHGI--------DGLRGYFLKQKRP 105 Q++R + ++ VL T H HADH G+ L L K P Sbjct: 455 EGTLNQLVRFYGLSRVNKVLATLGCILVSHLHADHHLGLIALLRARQSALEALGLP-KEP 513 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-----DVPICMKSAGGVIE 160 + V A F + + DR++ P+ + + +N D P + +I Sbjct: 514 VPVAAP---------RFMVPWTSRCDRSFEPVSHLFMFVDNASLLWDQPSPAEERSDLIR 564 Query: 161 AI------PILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQ-NLDFLIIDA 208 + +L +H + + GF + Y D P E L + D LI +A Sbjct: 565 RLKLKDLSSVLVKHCK-HAYGFTLTTEAGWKLTYSGDT--LPCEDLVRAGTGSDILIHEA 621 Query: 209 LKNG------LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM---VLKSTPSRVVP 259 L +H + S+++ + + +LTH Y V + V Sbjct: 622 TMEDDLAEEALLKTHSTTSQAIDVGSRMGARFTLLTHFSQR--YAKLPLVSDRFHASVGC 679 Query: 260 AFDGMQFSS 268 AFD M F+ Sbjct: 680 AFDHMLFAF 688 >gi|221316339|ref|ZP_03598144.1| hypothetical protein BsubsN3_21692 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|1064810|dbj|BAA11296.1| yycJ [Bacillus subtilis] Length = 268 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ + +K Sbjct: 22 EDHAFLVDAGLSGKAMDGLMAQIGR-KLDDVDGIFVTHEHSDHIKGLG-----VVARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA K + I + P+ + G ++ Sbjct: 76 LPIYANEKTWKAMEN---------------QIGKIDTDQKFVFPMETVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|227552544|ref|ZP_03982593.1| beta-lactamase superfamily I metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257888225|ref|ZP_05667878.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896887|ref|ZP_05676540.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|293378483|ref|ZP_06624646.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] gi|227178293|gb|EEI59265.1| beta-lactamase superfamily I metal-dependent hydrolase [Enterococcus faecium TX1330] gi|257824279|gb|EEV51211.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257833452|gb|EEV59873.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|292642812|gb|EFF60959.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] Length = 269 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 77/233 (33%), Gaps = 56/233 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 SL I ++VD G Q+ R +D +L TH H DHIHG+ Sbjct: 21 SLYIE-----SEKKRLLVDAGLSGKKITSLMAQIDRTP-DQLDGILVTHEHRDHIHGVG- 73 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K +DV+A + + P I N V + + + Sbjct: 74 ----VLARKYHLDVFANQQTWEAME---------------PLIGNVPVEQKHLFEMGKVR 114 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLD-FLI---- 205 G I+ H + +RF TD ++N D +L+ Sbjct: 115 TFGDIDIESFGVSHDAAAPQFYRFHKENHSFVMLTDTGYCSDYMRGVIENADGYLMESNH 174 Query: 206 -IDALKNGLHS-----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 ++ L+ G + H S + +L ++I K L H+ + Sbjct: 175 DLEMLRMGPYPWNLKQRILGDRGHLSNEDGALVMTDVIGNRTKRIYLGHLSKE 227 >gi|168211605|ref|ZP_02637230.1| ribonuclease Z [Clostridium perfringens B str. ATCC 3626] gi|170710416|gb|EDT22598.1| ribonuclease Z [Clostridium perfringens B str. ATCC 3626] Length = 316 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 87/307 (28%), Gaps = 91/307 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R ++Y + + Sbjct: 41 QVAMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEEIYIIGPKGIKEVIDG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + +H LG+ Sbjct: 101 FLITLPYLPYKLNVLEDVSDLEFMVKKEKMELVELNEKISSDLSIKTLELEHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKELWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVNAFPAESLE-KLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNAIL 237 D P E + ++ D I + + +H H + E+ + K +L Sbjct: 220 DTR--PTEDIPGFIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLAKKGQVKELLL 277 Query: 238 THMHVDL 244 TH + Sbjct: 278 THFSPSI 284 >gi|119504322|ref|ZP_01626402.1| pyrroloquinoline quinone biosynthesis protein PqqB [marine gamma proteobacterium HTCC2080] gi|119459830|gb|EAW40925.1| pyrroloquinoline quinone biosynthesis protein PqqB [marine gamma proteobacterium HTCC2080] Length = 270 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 85/265 (32%), Gaps = 66/265 (24%) Query: 57 IVDTGPDFYMQVL-------REQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + + PD Q+ R + I ++ DH GI L++ P+ Sbjct: 1 MFNASPDLRSQLEAAPPLQPRTGLRDTGIRGIVLADSQIDHTTGI-----LMLREGCPLQ 55 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAI---- 162 +Y + L F F+ L+ ++ V + + + G + A+ Sbjct: 56 IYCTDMVAEDLSTGFP-IFRMLE--SWDGGVEHHEVPTDGSAFSVDGVEGLQLTAVALDG 112 Query: 163 --PILQQHGRISSLGFRFGNVAYC-TDVNA------------FPAESLEKLQNLDFLIID 207 P H R NV Y TD NA E + ++ D +++D Sbjct: 113 KAPPYSPHRNDPH---RGDNVGYLVTDTNAGTSLLYAPGLGQMTPELVALMKTTDLVMVD 169 Query: 208 ALKN-----------GLHSSHF-SLSES-----LKKIELINPKNAILTHMHVDLDYDMVL 250 +S L +S L ++ + +L H++ +++ Sbjct: 170 GTFWCEDEMARAGVGTKLASQMGHLPQSGHDGMLAWLKTVERPRKVLIHINNTNP--ILI 227 Query: 251 KSTPS-------RVVPAFDGMQFSS 268 + +P V A DG++F Sbjct: 228 EDSPERAEVEAQGVEVAIDGLEFEV 252 >gi|71906487|ref|YP_284074.1| Beta-lactamase-like [Dechloromonas aromatica RCB] gi|71846108|gb|AAZ45604.1| Beta-lactamase-like protein [Dechloromonas aromatica RCB] Length = 255 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 32/167 (19%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D G Q L Q + +L TH H DH+ G+ + L +K Sbjct: 19 EHGATCLMLDCGFGLRETVTRLQRLGRQPADLAGILVTHEHGDHVGGV-----FRLARKF 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++ + ++ +I+++ G +E +P Sbjct: 74 GLPIWMTHGTWGACRDDGD-------------GIDLRIIDSHR-----SFTVGDLEILPF 115 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 H + + F + TD+ E L L+++ Sbjct: 116 PVPHDAREPVQYVFSGAGRRLGVLTDIGETTPHVCEVLSGCAGLVLE 162 >gi|116492893|ref|YP_804628.1| beta-lactamase superfamily hydrolase [Pediococcus pentosaceus ATCC 25745] gi|122265643|sp|Q03F36|RNZ_PEDPA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116103043|gb|ABJ68186.1| RNAse Z [Pediococcus pentosaceus ATCC 25745] Length = 308 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 86/291 (29%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S+ + + E N + D G Sbjct: 1 MQLEFLGTGAGS----------------PGKFRNVTSVALKLLDES--NEVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA----PDCMK 116 Q+L+ + ID + TH H DHI G+ G Q + ++ M Sbjct: 43 QHQILKTNIKPRKIDKIFITHLHGDHIFGLPGFLSSRSNQGGSEELTIFGPTGIKDFVMT 102 Query: 117 HLF---ESFRYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE----------- 160 L Y F + ++ ++ +KS G ++ Sbjct: 103 SLRISESKLSYRIKFVEIAQEGVLFEDQNYIVNVAELDHRIKSYGFRVKEKDHPGELLVD 162 Query: 161 -----AIP-------------ILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLE 196 AIP + GR+ + G V D P L Sbjct: 163 KLKELAIPSGPIYGQIKQGKEVTLDDGRVINGQDFIGKPQPGRVVTVLGDTRQTPNIEL- 221 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 ++ D L+ ++ S H + ++ K + N + +LTH+ Sbjct: 222 LAKDADALVHESTFGKQEGSLARNYYHSTNIQAAKIAKQANARQLLLTHIS 272 >gi|300727071|ref|ZP_07060490.1| ribonuclease Z [Prevotella bryantii B14] gi|299775615|gb|EFI72206.1| ribonuclease Z [Prevotella bryantii B14] Length = 304 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L PT N SS + ++D G Sbjct: 4 FKIHILGCGSAL-------------PTLHHNA---SSQIVEI-----REKLFMIDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 MQ+ + ++ I AV +H H DH G+ G+ F R + VYA D L + Sbjct: 43 QMQLRKSKIRFTKISAVFISHLHGDHCFGLIGMISTFGMLGRTATLHVYAPADFGPILQQ 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ + V ++ + + + IE IP+ RI+ GF F Sbjct: 103 QIDFFCSGLEFK-----VEFHPVDTSKSQVIYEDRSLTIETIPLEH---RIACCGFIF 152 >gi|296108796|ref|YP_003615745.1| beta-lactamase domain-containing protein [Methanocaldococcus infernus ME] gi|295433610|gb|ADG12781.1| beta-lactamase domain-containing protein [Methanocaldococcus infernus ME] Length = 263 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 90/289 (31%), Gaps = 63/289 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 LG G G W P + VD GP Sbjct: 4 EIIFLGSG--------GGRWATITQKKP----------TGGFRIHTDELKLHVDPGPGAI 45 Query: 64 FYMQVLREQVLSIDAVLYTHPHADH-----------IHGIDGLRGYFLKQKRPIDVYAAP 112 + L+ +++ +H H DH +G+ RG F+ ++ + Sbjct: 46 VRLNQLKISPWKTNSLFISHCHPDHYNDGEIIVEAITNGMTRKRGIFIGSLTVVEGFGE- 104 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 +++ + L YP + +HG Sbjct: 105 --YEYVISKYHQSKLELVKALYP---------------NDELKLYDTTIKATKTKHGDPF 147 Query: 173 SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALK--NGLHSSHFSLSESLKK 226 +GFR G++ Y +D P+ + + LI + ++ N H ++ + Sbjct: 148 GIGFRLKTKYGDIGYTSDTEFIPSLIKDF-DGVRVLIANIVRKKNEKIRGHLCSNDVIDL 206 Query: 227 IELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 I + P+ I+ HM V + + + ++T +VVPA G++ Sbjct: 207 INSMENKPELLIMNHMGVKMTNPLKEAKYIEENTNIKVVPAKLGLRIEL 255 >gi|154688135|ref|YP_001423296.1| YycJ [Bacillus amyloliquefaciens FZB42] gi|154353986|gb|ABS76065.1| YycJ [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 73/230 (31%), Gaps = 49/230 (21%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +VD G D M+ + ++ +D + TH H+DHI G+ + +K + Sbjct: 22 EEHSFLVDAGLSGKAMDGLMEKIGRKIDDVDGIFVTHEHSDHIKGLG-----VIARKYGL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA K + I + P+ + G ++ Sbjct: 77 PVYANEKTWKAMEN---------------QIGKLDTGQKFLFPMESVKSFGGLDVESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD +++ + + + L+ G + Sbjct: 122 SHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMHVDLDYDMVLKS 252 H S + +L ++I L H+ D + + + Sbjct: 182 SIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARM 231 >gi|322385660|ref|ZP_08059304.1| ribonuclease Z [Streptococcus cristatus ATCC 51100] gi|321270398|gb|EFX53314.1| ribonuclease Z [Streptococcus cristatus ATCC 51100] Length = 309 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPVGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + N + +++ H I + Sbjct: 103 MTSLR---------VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|314933681|ref|ZP_07841046.1| ribonuclease Z [Staphylococcus caprae C87] gi|313653831|gb|EFS17588.1| ribonuclease Z [Staphylococcus caprae C87] Length = 307 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 96/300 (32%), Gaps = 74/300 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSVWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTLIGPKGIQNYIE 102 Query: 112 ------------PDCMKHLFESFRYCFK----ALDDRTYPPIVNPIVIENNDVPICMK-S 154 P + + F Y + + + IE P + Sbjct: 103 TSLKLSESHLNYPITYIEINQQFTYHHEGFTVQAEVLNHGITSYGYRIEAPTTPGTINVE 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTD----------VNAFPAESLE------KL 198 A I P + F + Y +D + A ++ Sbjct: 163 ALKSIGLEPGPKYQEVKIQDTFEHNGLMYQSDDFKGEAKPGPIIAIFGDTKPCDNEYVLA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 +N D ++ +A L N H SH + + + I+ N +++TH+ + + V Sbjct: 223 KNADVMVHEATYIEGDKTLANNYHHSH--IDDVFQLIKNANVGKSLITHISNRYNLEDVE 280 >gi|270291406|ref|ZP_06197628.1| ribonuclease Z [Pediococcus acidilactici 7_4] gi|270280252|gb|EFA26088.1| ribonuclease Z [Pediococcus acidilactici 7_4] Length = 308 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 54/178 (30%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R +S+ + + E N + D G Sbjct: 1 MQLEFLGTGAGS----------------PGRFRNVTSVALKLLDES--NEVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q+L+ + ID + +H H DHI G+ G Q + +Y + Sbjct: 43 QHQILKTNIRPRKIDKIFISHLHGDHIFGLPGFLSSRSNQGGDSELTIYGPAGIKDFVMT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 AL +E + A V+E + RI S GFR Sbjct: 103 -------ALRISETKLAYRIRFVEITKGGKLFEDANYVVEVAELDH---RIKSYGFRV 150 >gi|259503099|ref|ZP_05746001.1| ribonuclease Z [Lactobacillus antri DSM 16041] gi|259168965|gb|EEW53460.1| ribonuclease Z [Lactobacillus antri DSM 16041] Length = 309 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + ER + + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVSSIALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y + Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGNEPLTIYGP----VGIKR 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + R P+ +E + G + A + +I+ G+R Sbjct: 99 FVTTALQVSESRLSYPL---HFVEIDHEGEVFHDQGFTVTAKKLDH---KIACYGYRV 150 >gi|126651963|ref|ZP_01724155.1| YycJ [Bacillus sp. B14905] gi|126591232|gb|EAZ85341.1| YycJ [Bacillus sp. B14905] Length = 262 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 54/241 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + IVD G Q+ + + + + TH H+DHI GI Sbjct: 14 SIYVE-----NDDYAFIVDAGLSGKKMEQLFTKIDRNMKKLSGIFVTHEHSDHIKGIG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K + +YA + + + + V + + + Sbjct: 67 ---VLARKYNVPIYANAKTWQAMDGL---------------VGDIPVEQRFEFDMDTVKH 108 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------ 205 G + H + + F + TD ++ D + Sbjct: 109 FGSLAVESFAVSHDAADPMFYTFHEGSRKLVIITDTGYVSDRMKGIIRGADSFVFESNHD 168 Query: 206 IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLK 251 ++ L+ G + H S ++ + + N L+H+ D + + + Sbjct: 169 VNMLQMGRYPWSIKRRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKDNNMKELAR 228 Query: 252 S 252 Sbjct: 229 M 229 >gi|226312974|ref|YP_002772868.1| hypothetical protein BBR47_33870 [Brevibacillus brevis NBRC 100599] gi|226095922|dbj|BAH44364.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 249 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 42/239 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIH-------GIDGLRGY-FLKQ 102 +++D G Q+ + + +DA+L +H H DH+ G+ + + Sbjct: 27 DRVKILLDCGSGVLAQLGKHLPIFELDAMLLSHYHHDHVADVGVMQYGLMVHQLFGQRPA 86 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 +P+ +YA L +V + G + Sbjct: 87 DKPLPIYAPA----------------LPVANAETLVYRRATTFTPITEETSVTIGDVAIT 130 Query: 163 PILQQHGRI-SSLGFRFGN----VAYCTDVNAFPAESLE-KLQNLDFLIIDALK-----N 211 + HG R + Y D P + E D I + Sbjct: 131 FLRTDHGDGDPCYAMRLEANGRVLVYGADSG--PGTAWEGFASQADLFICEGTYLDYNVP 188 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV----PAFDGMQF 266 + H S+ ++ + + ++ ++ ++TH+ + V+ + V A G+Q Sbjct: 189 AKPNGHLSVRQAAELAQSLSCRSLLVTHLFYGYEESQVIAEANAFVEGPVYAARIGLQI 247 >gi|300936832|ref|ZP_07151723.1| ribonuclease Z [Escherichia coli MS 21-1] gi|300458075|gb|EFK21568.1| ribonuclease Z [Escherichia coli MS 21-1] Length = 305 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKLTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|260101648|ref|ZP_05751885.1| ribonuclease Z [Lactobacillus helveticus DSM 20075] gi|260084549|gb|EEW68669.1| ribonuclease Z [Lactobacillus helveticus DSM 20075] gi|328467455|gb|EGF38530.1| ribonuclease Z [Lactobacillus helveticus MTCC 5463] Length = 312 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + P+ +Y P + + Sbjct: 43 QHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPPGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP +E + + G H RI S GFR Sbjct: 102 VSLK---VSRTKVSYP----IKFVELTKPGLICEDKG--FRVYTDRLDH-RIPSFGFRV 150 >gi|205372860|ref|ZP_03225669.1| metal-dependent hydrolase [Bacillus coahuilensis m4-4] Length = 250 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 77/232 (33%), Gaps = 25/232 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +T++++D G + L +D ++ +H HADH+ + L+ Sbjct: 31 QCDDTSILLDCGSGALSHMQEYINPLELDGLILSHYHADHVADVGVLQ----------HA 80 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + + + E+ +++ + + V + G + +H Sbjct: 81 YLIGNKLNNRNETLSIFGHNENEQEFQRLTYKGVTKGRPYDAHSSVTIGPFSIQFLRTEH 140 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSL 220 + + + Y D +A+ + + D L+ ++ + H + Sbjct: 141 S-VPCFAMKVTCKGKVIVYTAD-SAYQPSFIPFAEYADLLLCESNFYVGMDAKSAGHMTS 198 Query: 221 SESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 E+ K +LTH+ ++ + K V+ A G+ Sbjct: 199 REAGFLALESKVKKLVLTHLPHFGSHETLKKEAEELFKGPVLLADKGLVLEI 250 >gi|152977661|ref|YP_001377178.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026413|gb|ABS24183.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 264 Score = 57.8 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 74/236 (31%), Gaps = 51/236 (21%) Query: 52 SNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD G + Q + I +L TH H+DHI G+ L +K Sbjct: 22 DKQKLLVDAGLSGKATEALFEQAE-LNIQDISGILVTHEHSDHIKGLG-----VLARKYN 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA + I N + I G IE Sbjct: 76 LPVYANEKTWNAMEHL---------------IGNIATDQKFIFSIGDVKTFGDIEVESFG 120 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD ++ + + ++ L+ G + Sbjct: 121 VSHDAAEPMFYVFHHGGRKLALITDTGYVSDRMKGVIKGANAFVFESNHDVEMLRMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRV 257 H S + +L ++I K+ L H+ +D + + + S+V Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVITDETKHIYLAHLSLDNNMKELARMAVSQV 236 >gi|182438427|ref|YP_001826146.1| hypothetical protein SGR_4634 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466943|dbj|BAG21463.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 250 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 50/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P SS + R +++D G Sbjct: 1 MKLTVVGC--SGSFPSTGSAC--------------SSYLVEADGFR-----LLLDMGNGA 39 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDCMK 116 ++ R + +DA+ +H H DH ID + ++ R P+ VY + Sbjct: 40 LGELQRHVGLYDLDAIFLSHLHVDHF--IDMCAYFVVRYYRHDGARPVPLPVYGPEGTEQ 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + ++ + + + + I G +H + + G Sbjct: 98 RLTAAHG---DTPSEQAMSEVFDFHTLTSQSFEI------GPFTVRTEKLRH-PVDAFGI 147 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIE 228 R + +AY D A + ++ D + +A K + H + E+ + Sbjct: 148 RVEHGGSVLAYSGDTGTCDALE-DLARDADLFLCEASFVDGKEDIPDLHLNGREAGEAAA 206 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 207 RAGARRLVLTHI 218 >gi|305667609|ref|YP_003863896.1| ribonuclease Z [Maribacter sp. HTCC2170] gi|88709659|gb|EAR01892.1| ribonuclease Z [Maribacter sp. HTCC2170] Length = 301 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 98/304 (32%), Gaps = 83/304 (27%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P+ +S + N ++D G +Q+ + ++ I+ + +H H Sbjct: 8 CYAATPRTLTNPTSQVLEI-----KNHMFLIDCGEGTQVQLRKNKIKFSRINHIFISHLH 62 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F R + VY K + E+ K D T P + + Sbjct: 63 GDHFFGLPGLISTFRLLGREKEVHVYGP----KGIKEAITLLLKLGDSWTNYP-LRFHEL 117 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------NVAY-- 183 + + + +E IP+ R+ + GF F + Y Sbjct: 118 TSKGPELIFEDEKVTVETIPLNH---RVYTNGFLFKEKLGERKLNVEAVAKYKIDKCYFQ 174 Query: 184 ---------------------------------CTDVNAFPAESLEKLQNLDFLIIDA-- 208 C+D +P + +E+++ +D L ++ Sbjct: 175 NIKNGKDIKSDDGTFIPNAELTFDPTKPKSYAYCSDTGYYP-KIVEQIKKVDVLYHESTF 233 Query: 209 LKNGLHSS----HFSLSESLKKIELINPKNAILTHM-----HVDLDYDMVLKSTPSRVVP 259 L++ H S H + E+ + + IL H ++L D V Sbjct: 234 LESESHLSPKTKHATAKEAATIAKKADVGTLILGHYSTRYKSIELFKDEAETIF-ENVEL 292 Query: 260 AFDG 263 A DG Sbjct: 293 ANDG 296 >gi|291486674|dbj|BAI87749.1| hypothetical protein BSNT_06196 [Bacillus subtilis subsp. natto BEST195] Length = 264 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ + +K Sbjct: 22 EDHAFLVDAGLSGKAMDGLMAQIGR-KLDDVDGIFVTHEHSDHIKGLG-----VVARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA K + I + P+ + G ++ Sbjct: 76 LPIYANEKTWKAMEN---------------QIGKIDTDQKFVFPMETVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|56964901|ref|YP_176632.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] gi|56911144|dbj|BAD65671.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] Length = 242 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 30/214 (14%) Query: 56 VIVDTGPD--FYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-----I 106 ++D G +Q + V +I V TH H DHI + L Y + P + Sbjct: 29 FLIDCGSSTFHRLQSFHVLDGVKTIH-VAMTHTHPDHIGSLGDLIFYSYFKMEPAFQAKV 87 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V A + + + + + V M G IE +P+ Sbjct: 88 TVLAPQALLPAIKAVLK----------GNGVDDTHVFWQEIKDAYMYEGCGGIELVPVQV 137 Query: 167 QHG-RISSLGFRF----GNVAYCTDVNAFPAESLEKLQ--NLDFLIID-ALKNGLHSSHF 218 QH + G+ ++ Y D NA A+ L+KL+ D D + + H Sbjct: 138 QHAENLLCFGYEINTKGNHIYYSGDANAISADVLQKLKAGQYDVFYQDTCTADYPGNVHL 197 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 SL + ++ + N +++ MHVD ++D+ Sbjct: 198 SLRKLIELVPEEN--RSVVCCMHVDEEFDLAYAK 229 >gi|167759775|ref|ZP_02431902.1| hypothetical protein CLOSCI_02138 [Clostridium scindens ATCC 35704] gi|167662394|gb|EDS06524.1| hypothetical protein CLOSCI_02138 [Clostridium scindens ATCC 35704] Length = 302 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 88/300 (29%), Gaps = 99/300 (33%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P R ++L + + ++V++D G + Sbjct: 6 LLGTGGMMPLP----------------YRWLTALMVRY-----NGSSVLIDCGEGTQI-A 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFR 123 ++E+ ID + +TH H DHI G+ GL + P+ + ++ + S R Sbjct: 44 IKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTLVGPKG-LERVVNSLR 102 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-----RF 178 L IE + + G ++ H ++ G+ R Sbjct: 103 VIAPELPFS-------IKYIEITEPEQTFEMNGYRLKV--FRVNH-NVTCYGYSMEIDRA 152 Query: 179 GNV----------------------------------------------AYCTDVNAFPA 192 G YCTD P Sbjct: 153 GKFDVERANAAGIPQKYWGILQKGETVEEGGSVYTPDMVLGPARKGIKLTYCTDTR--PT 210 Query: 193 ESLE-KLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 ES++ D I D LK H + E+ + + K LTH L Sbjct: 211 ESMKNNAAGSDLFICEGMYGEKDKLKKAKEYKHMTFYEAAQVAKEAGVKEMWLTHYSPSL 270 >gi|84686455|ref|ZP_01014349.1| metallo-beta-lactamase family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665638|gb|EAQ12114.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2654] Length = 554 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 46/165 (27%), Gaps = 35/165 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L E ++A+ TH H D Sbjct: 21 AYVYGYGAPGKERLILVDLGVTFPDMETTPGVDLIMADVSWLVENRDRLEAIFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ I L + VYA H + D+ VI Sbjct: 81 HVGAIGRLWSEL-----RVPVYARAFTAHHARRKMEEAGQDPDE----------VITAGA 125 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 P ++ G + + H S G G +A+ D Sbjct: 126 YPEKIE--VGPFKVAFVPISHSIPESAGLVIDTPAGRIAHSGDFK 168 >gi|146304551|ref|YP_001191867.1| ribonuclease Z [Metallosphaera sedula DSM 5348] gi|172046934|sp|A4YHP1|RNZ_METS5 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|145702801|gb|ABP95943.1| RNAse Z [Metallosphaera sedula DSM 5348] Length = 291 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 54/240 (22%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRP 105 R ++++D G + ++R +++++ + TH HADH+ G+ L +K Sbjct: 25 RREGLSILMDCGEGTQITMIRNSLNIMNVNVIAITHLHADHVLGLPSLIQTMGMYDRKER 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALD------------DRTYPPIVNPIVIENNDVPICMK 153 + + L E+F + + + P V+ + + K Sbjct: 85 LYILGPEGLKDLLTETFERTYFSPNFPIEFVSSYESQGIRVRPFRTCHVVPSQGYLVEEK 144 Query: 154 SAGG---------VIEAIPILQQ--HGRISSLGFRFG------------NVAYCTDVNAF 190 + +++ G+ G R +AY D Sbjct: 145 DTANLDAERLRREGVTDWRVMRMLKEGKEVPWGDRVLKPEDYLIVKRGIRIAYTGDTR-- 202 Query: 191 PAES-LEKLQNLDFLI--------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P E+ + ++ +D L+ IDA + G H + +E+ K L H+ Sbjct: 203 PCETVINSVKGVDLLLHDSTFEQGIDASEYG----HSTSTEAATVAREAEVKRLALIHIS 258 >gi|116748676|ref|YP_845363.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697740|gb|ABK16928.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 260 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 81/241 (33%), Gaps = 56/241 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS T +++D G V R +DAV+ +H HADH+ G+ Sbjct: 16 SILIS-----SPRTHILLDAGLSARELVRRLEKTSVNARQLDAVVVSHEHADHVRGVG-- 68 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L ++ + V+ + ++ L P I + + Sbjct: 69 ---VLSRRFELVVHLSQGSLEGLD---------------PQI--GRLAGHQVFQPGRAFD 108 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 G + P H GF + CTD+ +LQ L+I+A Sbjct: 109 IGDLRLHPFPISHDAREPSGFVVEHAGVRLGICTDLGVVTELVKARLQGCSGLVIEANHD 168 Query: 209 ---LKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLK 251 L NG + H S +SL+ ++ + ++ + H+ ++ ++ Sbjct: 169 PDLLINGPYPWHLKQRIRSRHGHLSNIDSLELLKCLYNECLRSVVFAHLSETNNHPELVL 228 Query: 252 S 252 Sbjct: 229 E 229 >gi|297569828|ref|YP_003691172.1| beta-lactamase domain-containing protein [Desulfurivibrio alkaliphilus AHT2] gi|296925743|gb|ADH86553.1| beta-lactamase domain-containing protein [Desulfurivibrio alkaliphilus AHT2] Length = 262 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 31/168 (18%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D G + + L + AVL +H H DHI G L ++ Sbjct: 18 EAGETRLLIDAGFSGRELETRLDALGIDPAGLSAVLLSHEHGDHIRG-----AGVLSRRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA ++ + ++ G I+ P Sbjct: 73 HLPLYANRPTLQAAARNLG-----------------SPAAVHEFTTGATFTCGAIKVHPF 115 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +GF + +CTD+ + +L L+++ Sbjct: 116 AVSHDAAEPVGFLLQAGGLRLGHCTDLGMVSRLARHRLTGCHALVLEC 163 >gi|256851723|ref|ZP_05557111.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 27-2-CHN] gi|260661559|ref|ZP_05862471.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 115-3-CHN] gi|282933551|ref|ZP_06338921.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|297205341|ref|ZP_06922737.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus jensenii JV-V16] gi|256615681|gb|EEU20870.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 27-2-CHN] gi|260547616|gb|EEX23594.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 115-3-CHN] gi|281302294|gb|EFA94526.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|297149919|gb|EFH30216.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus jensenii JV-V16] Length = 265 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 58/256 (22%) Query: 38 TRSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHA 86 R S+ S + +++D G D QV + ID +H H+ Sbjct: 1 MRVSVLASGSTGNTSLIETKKHKILMDAGLSGKKIKDLLAQV-GVDIKDIDMAFLSHDHS 59 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DH G+ G +++ I+ +A K+L + + P+ IE Sbjct: 60 DHSKGL----GVLMRRYPQINAFANSGTWKYLIDE--------NKIGKLPVEQINAIEPG 107 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD 202 V +E H + F +A+ TD + + +++ D Sbjct: 108 QVR-----TFDDLEIQAFATSHDAAQPQYYVFSSAGKRIAFLTDTGYVSEKVRDVIKDSD 162 Query: 203 FLII------DALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHV 242 ++ + L+NG +S H S ++ + E + K+ LTH Sbjct: 163 AYMLEFNYDNELLRNGPYSWQLKQRIMSDYGHLSNEQASEVFEDVLTAKTKHIFLTHRSQ 222 Query: 243 D-----LDYDMVLKST 253 L +D ++ + Sbjct: 223 HNNTLRLAHDTLVNNL 238 >gi|161507441|ref|YP_001577395.1| ribonuclease Z [Lactobacillus helveticus DPC 4571] gi|172048277|sp|A8YV16|RNZ_LACH4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|160348430|gb|ABX27104.1| ribonuclease Z [Lactobacillus helveticus DPC 4571] Length = 312 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + P+ +Y P + + Sbjct: 43 QHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPPGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP +E + + G H RI S GFR Sbjct: 102 VSLK---VSRTKVSYP----IKFVELTKPGLICEDKG--FRVYTDRLDH-RIPSFGFRV 150 >gi|51243855|ref|YP_063739.1| hypothetical protein DP0003 [Desulfotalea psychrophila LSv54] gi|50874892|emb|CAG34732.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 307 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 81/275 (29%), Gaps = 69/275 (25%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N V++D G ++ V +D + +H H DHI G +L Sbjct: 40 ENRLVVIDAGSGIRALGNALMNADVPRGSLSLD-LFLSHTHWDHIMGFPFFAPIYLPT-T 97 Query: 105 PIDVYAA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 ++VY + +Y + ++ +N ++ I G + Sbjct: 98 RMNVYGPVSYEENSLEDVVGGQMKYRYFPVNVGELSSHINYRSLQE----ISRLDMGRGL 153 Query: 160 EAIPILQQHGRISSLGFRF--GNVAYCT--DVNAF----------PA------------- 192 + H +S+LG+RF G +CT D F P Sbjct: 154 QLTTKYLNH-PVSTLGYRFEYGGKVFCTCYDTEPFRNLFVTDRDDPEYDEMLAYEGELVA 212 Query: 193 -----ESLEKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPKNAILTHM 240 D LI DA H + ++ E K +L Sbjct: 213 AEQNRAIESFFAGADVLIHDAQYTQQEYETMRRDWGHSPIEHVIQAAERAGVKRLVL--F 270 Query: 241 HVDLDY---------DMVLKSTPSRVVPAFDGMQF 266 H D D + +S +V A +GMQ Sbjct: 271 HHDPDRTDAQLDLFSEKYCQSLSMQVEFAREGMQL 305 >gi|221312014|ref|ZP_03593861.1| hypothetical protein Bsubs1_21786 [Bacillus subtilis subsp. subtilis str. 168] gi|221321252|ref|ZP_03602546.1| hypothetical protein BsubsJ_21645 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325535|ref|ZP_03606829.1| hypothetical protein BsubsS_21801 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767871|ref|NP_391917.2| hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|321313598|ref|YP_004205885.1| putative hydrolase [Bacillus subtilis BSn5] gi|264675896|sp|C0SP91|YYCJ_BACSU RecName: Full=Putative metallo-hydrolase yycJ gi|225185499|emb|CAB16074.2| putative hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|320019872|gb|ADV94858.1| putative hydrolase [Bacillus subtilis BSn5] Length = 264 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ + +K Sbjct: 22 EDHAFLVDAGLSGKAMDGLMAQIGR-KLDDVDGIFVTHEHSDHIKGLG-----VVARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA K + I + P+ + G ++ Sbjct: 76 LPIYANEKTWKAMEN---------------QIGKIDTDQKFVFPMETVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|88604114|ref|YP_504292.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189576|gb|ABD42573.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 285 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 56/227 (24%) Query: 50 RGSNTTVIVDTGPDFYM---------QVLREQVLS--IDAVLYTHPHADHIHGIDGLRGY 98 G++ +I+D G ++ I+ +L TH H DH+ G+ L Sbjct: 18 EGTSGALIIDAGRSAREILGTKDRKGRLFEAGGNRDLIEGILITHEHGDHVKGLGPL--- 74 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + Y + + K ++ P + G Sbjct: 75 --GNALKVSAYGTSGTLD-VTNRMIQTKKNFTFQSVHP--------------GDPFSIGD 117 Query: 159 IEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 H +G+ + YCTD + +E ++ D +I+++ Sbjct: 118 FTVTAFSVSHDATDPVGYLIEEGGLRICYCTDTGVVTSGMMEMIKKSDGVILESNHCPQM 177 Query: 209 LKNGLHSS-----------HFSLSES---LKKIELINPKNAILTHMH 241 LK+G + + H S ++ L +I + AIL H+ Sbjct: 178 LKDGPYPAFLKRRIASSRGHLSNEDAGMVLAEISR-SIHCAILAHLS 223 >gi|328954346|ref|YP_004371680.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328454670|gb|AEB10499.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 281 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 44/229 (19%) Query: 44 ISRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + VSE+G +++D G ++++ +L TH H DHI G+ +F Sbjct: 29 VEIVSEQG--RRLVIDAGTGIRALGDELVQSGRPVRLTLLLTHTHWDHILGM----AFFR 82 Query: 101 KQKRPIDVYAA--PDCMKHLFESF---RYCFKALDDRTYPPIVNPIV---IENNDVPICM 152 VY + ++F F Y P+ + I +++ Sbjct: 83 ------PVYLDNTDITIDGCPKAFWGLAKVFDDRKGNGYFPVAFDELKANIRHSERIANG 136 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD--------VNAFPAESLEKLQN 200 G + I H + +GF+ + + TD V P + + Sbjct: 137 PLQVGDLTVEGIEINHPQGG-MGFKVMEHNRCMVFLTDNELRSDAPVGRRPQDFAHFARG 195 Query: 201 LDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 D LI DA + + H + E+++ + +L H D Sbjct: 196 CDLLIHDAQYLPEEIADRRGWGHSTYVEAVELALQAGTRRLLL--FHHD 242 >gi|325695994|gb|EGD37885.1| ribonuclease Z [Streptococcus sanguinis SK160] Length = 309 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 90/296 (30%), Gaps = 79/296 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 Q+L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 115 MKHLF---ESFRYC--FKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F D+ + I+ +E Sbjct: 103 LSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQN---- 200 +++AG + ++G+ L G + Y + P +++ L + Sbjct: 163 LDADKLRAAGVPFGPLFGKVKNGQDIVLEDGTKIIAADYISAPR--PGKTIAILGDTRKT 220 Query: 201 ---------LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A K + H + ++ + + K +L H+ Sbjct: 221 SASVRLAVAADVLVHEATYGKGDEKLARNHGHSTNMQAAEVAKEAGAKCLLLNHIS 276 >gi|299541800|ref|ZP_07052123.1| YycJ [Lysinibacillus fusiformis ZC1] gi|298725538|gb|EFI66179.1| YycJ [Lysinibacillus fusiformis ZC1] Length = 262 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 54/241 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + IVD G Q+ + + + + TH H+DHI GI Sbjct: 14 SIYVE-----NDDHAFIVDAGLSGKKMEQLFTKIDRNMKQLSGIFVTHEHSDHIKGIG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K + +YA + + I + V + + + Sbjct: 67 ---VLARKYSVPIYANAKTWQAMDGL---------------IGDIPVEQRFEFEMDTVKH 108 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------ 205 G + H + + F + TD ++ D + Sbjct: 109 FGSLAVESFAVSHDAADPMFYTFHENDRKLVIITDTGYVSDRMKGIIRGADSFVFESNHD 168 Query: 206 IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLK 251 ++ L+ G + H S ++ + + N L+H+ D + + + Sbjct: 169 VNMLQMGRYPWSIKRRILSDVGHVSNEDAAIAMSEVVFDKTTNIYLSHLSKDNNMKELAR 228 Query: 252 S 252 Sbjct: 229 M 229 >gi|219849179|ref|YP_002463612.1| metal-dependent hydrolase [Chloroflexus aggregans DSM 9485] gi|219543438|gb|ACL25176.1| metal-dependent hydrolase [Chloroflexus aggregans DSM 9485] Length = 280 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 27/211 (12%) Query: 51 GSNTTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG F MQ + +L +H + DHI G+ G Sbjct: 34 DHGELIVLDTGTGFCMLGDELMQGEFGRGRGTLTLLISHTYWDHILGLP-FPGVVHIPGN 92 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM---KSAGGVIEA 161 +D+Y L + + Y P+ I + G + Sbjct: 93 RLDIYGPDSTRGSLQMVYDGILSPV----YSPVYGLAHIGATHRFTTISTEPFTIGRLTV 148 Query: 162 IPILQQ-HGRISSLGFRFGN----VAYCTDV----NAFPAESLEKLQNLDFLIIDA--LK 210 + H +R + Y TDV + +++ +N LI A L+ Sbjct: 149 RALPLSRHSHSPIWAYRLEEDSRVLVYMTDVRYNEDRIWKQAIAFTRNAHVLIHSAPYLR 208 Query: 211 NGL--HSSHFSLSESLKKIELINPKNAILTH 239 + H + ++++ + + + H Sbjct: 209 DEPVEDYGHSRIEDAIEVAQQAGVERLFIFH 239 >gi|284044651|ref|YP_003394991.1| ribonuclease Z [Conexibacter woesei DSM 14684] gi|283948872|gb|ADB51616.1| ribonuclease Z [Conexibacter woesei DSM 14684] Length = 328 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 34/169 (20%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-E 71 G + VP RR ++ + R ++R ++ D G Q+LR Sbjct: 9 GTAGSVPTA--------------RRGLPAILLRRGADR-----ILFDCGEGTQRQLLRSA 49 Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 + + V TH HADH G+ G+ F + +P+ ++ P ++ L RY + Sbjct: 50 GLADLTDVFITHFHADHWLGLPGMLKTFDLRARDKPLTIHGPPG-LRKLMNDMRYVWGGC 108 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 I +++P P L H R ++ G+ Sbjct: 109 G----------YEITLSELPPDAMVERDEYVIEPFLVNH-RGTAYGYVI 146 >gi|228476129|ref|ZP_04060837.1| ribonuclease Z [Staphylococcus hominis SK119] gi|314936370|ref|ZP_07843717.1| ribonuclease Z [Staphylococcus hominis subsp. hominis C80] gi|228269952|gb|EEK11432.1| ribonuclease Z [Staphylococcus hominis SK119] gi|313654989|gb|EFS18734.1| ribonuclease Z [Staphylococcus hominis subsp. hominis C80] Length = 306 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 85/291 (29%), Gaps = 74/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K+R T++ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KDRNTQAIAL---NLEPYSNSVWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + TH H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGEDKPLTLIGPTGLQQFIE 102 Query: 112 ------------PDCMKHLFESFRYCFKALDDRT-----YPPIVNPIVIENNDVPICMKS 154 P + +F Y + P + + Sbjct: 103 TALKLSESHLNYPITYIEIDNNFTYHHHGFTVSSRLLNHGIPSYGYRIEAPTTPGTIDVT 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFP---------------AESLEKL 198 A I P + F + N Y + D Sbjct: 163 ALKAIGLEPGPKYQEVKMFDTFEYNNQIYLSKDFKGPAKPGPIVTIFGDTKPCDNEYILA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +N D +I +A L N H SH + + + I N K + +TH+ Sbjct: 223 ENADIMIHEATYIEGDKILANNYHHSH--IDDVFRLIHQSNVKKSFITHLS 271 >gi|329769320|ref|ZP_08260736.1| hypothetical protein HMPREF0433_00500 [Gemella sanguinis M325] gi|328839123|gb|EGF88708.1| hypothetical protein HMPREF0433_00500 [Gemella sanguinis M325] Length = 271 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 49/227 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ + +N +VD G + Q+ R + I+A+ TH H DHI GI Sbjct: 14 SIYLEH-----NNFKCLVDAGLTGKKITENLAQIER-DIKDINAIFVTHEHIDHIKGIG- 66 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K I VYA ++ + + + + E+ + + Sbjct: 67 ----VLARKYNIPVYANKLTWDNMQK--------VGEIKTDLKFHFEKEESKIFDDVVVN 114 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI------IDA 208 + GV Q + G R V+ TD + ++ +++ ++ + Sbjct: 115 SFGVSHDAANPQFY-TFECEGKR---VSILTDTGYVSDKMIDYVKDSHTIVYESNHEENV 170 Query: 209 LKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 L +G + H S ++S + I N KN L H+ Sbjct: 171 LLSGPYPWVTKQRILSDKGHLSNNDSANYLTKIVGDNTKNVFLAHLS 217 >gi|253997317|ref|YP_003049381.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253983996|gb|ACT48854.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 257 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 35/178 (19%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +NT +++D G + L + V+ TH H DH + I Sbjct: 20 NNTRLMLDCGFSIKETTSRLARLNLSPEDLAGVVITHEHDDHAG-----GAFKFAAAHHI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ +K F ++ N + + +E P Sbjct: 75 PVWLTYGTLKMAERYFP---------------RQHDLQLNVIDSHTPFSVADVEVYPYPV 119 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + F FG+ + TDV ++L D L+++ L+NG + Sbjct: 120 PHDAREPVQFVFGDGQRRLGVLTDVGRSTVHIEQQLSGCDALVLECNHDSAMLRNGPY 177 >gi|25010798|ref|NP_735193.1| hypothetical protein gbs0743 [Streptococcus agalactiae NEM316] gi|77410774|ref|ZP_00787132.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|23095152|emb|CAD46387.1| Unknown [Streptococcus agalactiae NEM316] gi|77163153|gb|EAO74106.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] Length = 269 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ L +K + Sbjct: 25 PQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + E + V + + G ++ Sbjct: 80 DIYANEQTWKVMDERNM-------------LGKVDVSQKHVFGRGTTLTFGDLDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMASLIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + S I I K+ L H+ +L + + + Sbjct: 187 TLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMENNL 242 >gi|281416641|ref|ZP_06247661.1| beta-lactamase superfamily hydrolase [Clostridium thermocellum JW20] gi|281408043|gb|EFB38301.1| beta-lactamase superfamily hydrolase [Clostridium thermocellum JW20] Length = 244 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 86/271 (31%), Gaps = 50/271 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG + P G S + + T +++D G Sbjct: 1 MKLTILG--NNGPFPSAGGAC---------------SGYLVTEGD----TRILIDCGNGV 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLR-GYFLK--QKRPID---VYAAPDCMKH 117 + ++ + AV+ TH H+DH+ + LR +K + I+ VYA + + Sbjct: 40 LANYQKFARIEDLSAVILTHLHSDHMSDMMVLRYALQIKKSRGADIELLKVYAPSEPAEE 99 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 D + PI V++ ++ I ++ + +G Sbjct: 100 YNR-----LNIPDVYSLNPISEDTVLKFGNLEISFAVMKHPVKCFGVSVYNGS------- 147 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSS--HFSLSESLKKIELINP 232 + D +E + D +++DA K+ + H + E + Sbjct: 148 -KRFVFSGDTAW-DQNIIEFSRGADLVMLDAGLLSKDKKSDNVPHLTARECGLVAKEAGV 205 Query: 233 KNAILTHMHVDLD---YDMVLKSTPSRVVPA 260 +LTH + D + K V A Sbjct: 206 SMLLLTHFWPEDDVSNHLAEAKENFENVEIA 236 >gi|78044467|ref|YP_359148.1| hypothetical protein CHY_0276 [Carboxydothermus hydrogenoformans Z-2901] gi|77996582|gb|ABB15481.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans Z-2901] Length = 324 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 82/261 (31%), Gaps = 61/261 (23%) Query: 57 IVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK-RPIDVYAAP 112 VD GP + L + SI AV +H H DH G + + G R + A Sbjct: 71 WVDPGPSAIVRARELNIDLGSISAVYISHGHQDHYGGAEPIIEGMCWGMFARRGFLLAPG 130 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + F + + +V+ P+ + G + IP+ HG Sbjct: 131 KVLD---DRMISPFHQGINTGFYSGGPEVVVLKALTPVEI----GKVTVIPVAAYHGE-E 182 Query: 173 SLGFRFG----NVAYCTDVNAFP---------------------------AESLEKLQNL 201 + GF + Y +D N + + + Sbjct: 183 NYGFILKYKNLAIGYTSDTNYILSYQSLTGVKKVERMGPVNDFLEVVDYREDLKKFFSEV 242 Query: 202 DFLIIDALKNGLHSS--HFSLSESLKKIELI---NPKNAILTHMHVDLDY-DMVLKSTPS 255 D LI + H+S H L+ +L L+ K A+LTH + Y + + + Sbjct: 243 DILIANV---TAHNSWMHRHLT-TLGLAHLLKDSKVKLAVLTHFNYCCLYPEDLREKMAR 298 Query: 256 RVV--------PAFDGMQFSS 268 V DG++ Sbjct: 299 YVREKSGIKTIAGKDGLKLEL 319 >gi|1381661|gb|AAB02732.1| arylsulfatase homolog [Escherichia coli] Length = 305 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---LDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|241666986|ref|YP_002985070.1| putative hydrolase protein, beta-lactamase superfamily [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862443|gb|ACS60108.1| putative hydrolase protein, beta-lactamase superfamily [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 276 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 31/218 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R +I D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGEHRMIFDAGSGLREAGLSLLADSVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +++++ K F + P I + AG V+ Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISP-----PWFPVKTDICQATMNFSDFHAGQVLNP 144 Query: 162 IP------ILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIID 207 P + H ++G+R +VA D+ P SLE +Q+ D ++ D Sbjct: 145 RPGVKIKTFMLNHPG-GAIGYRIEWQGRSVALIYDIEHDPGNYDPVSLEMMQDADLVVYD 203 Query: 208 A------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 204 CTYNEDEMQRFKGFGHSTWQHGTELAKIAGAKRFALFH 241 >gi|115891515|ref|XP_783904.2| PREDICTED: similar to Im:7145112 protein [Strongylocentrotus purpuratus] gi|115949378|ref|XP_001191861.1| PREDICTED: similar to Im:7145112 protein [Strongylocentrotus purpuratus] Length = 720 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 62/297 (20%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ N+ S + SE N ++I+D G + Sbjct: 402 EVVFLGTGSAM-----------------PNKARNVSGILLNFSE---NKSMIMDCGEGTF 441 Query: 66 MQVLREQVLSIDAV-------LYTHPHADHIHGI-------------DGLRGYFLKQK-R 104 Q+ R +D V +H HADH G+ D + + Sbjct: 442 GQLCRYYGDKVDGVMASIQCIFISHIHADHHAGLINLLKHWKRVTKSDDSGNNLILIGPK 501 Query: 105 PIDVYA---APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ++ C + + F L D E + + + Sbjct: 502 RMFIWLNLFDQHCESFIHRT---RFVELADLNINQQGERSRHEASLLSRFNLKEFNTVYV 558 Query: 162 IPILQQHGRISSL--GFRFGNVAYCTDVNAFP-AESLEKLQNLDFLI-----IDALKNGL 213 +G + G++ + Y D P ++ + D LI D ++ Sbjct: 559 RHCANAYGVTLTHQDGWK---MVYSGDT--MPCDNLIKAGKGADLLIHEATLEDGMEEEA 613 Query: 214 HSS-HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQFSS 268 H +S++++ + + K +LTH ++ S+ S++ AFD M+ S Sbjct: 614 KKKRHSMISQAIEVGQSMEAKFLLLTHFSQRYPKVPLIETSSTSKIGIAFDNMRVSF 670 >gi|299133904|ref|ZP_07027098.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Afipia sp. 1NLS2] gi|298591740|gb|EFI51941.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Afipia sp. 1NLS2] Length = 274 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 29/217 (13%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +I D G + L Q D + ++H H DH+ G+ ++ + ++ Sbjct: 39 GENRLIFDAGSGLRGLGEALLGQSGESD-LFFSHLHIDHLIGLPFFLP-AFEKGNRLRLW 96 Query: 110 AA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 AA L + + + + DV G V+ + Sbjct: 97 AAGLKEVGGLRAALDRYMSFPLFPIGLDQFQAEIGFHDFARGDV--LTPRPGIVLRTAAL 154 Query: 165 LQQHGRISSLGFRFG----NVAYCTDV---NAFPAESLEKLQNLDFLIIDA------LKN 211 G + G+R + Y TD L + D L++DA L Sbjct: 155 DHPGG---ATGYRLEFVGRSFCYMTDTAMDAEVAPAMLALAKGADCLVMDATYTDSELAK 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 H S ++ + K L H ++D Sbjct: 212 YAGWGHASWQQNAAFADAAGVKTLCL--FHHAPEHDD 246 >gi|57234781|ref|YP_181170.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] gi|57225229|gb|AAW40286.1| metallo-beta-lactamase family protein [Dehalococcoides ethenogenes 195] Length = 258 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 93/255 (36%), Gaps = 38/255 (14%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 TR S + V++D G L E + + AV+ +H H DHI + L Sbjct: 16 TRPSCLMLSGG-------VVLDAGAITSSLTLDE-LYELRAVILSHAHYDHIKDVPLLAM 67 Query: 98 YFLKQKRPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + +D+Y + + + + F F D T PP + +++ ++ + Sbjct: 68 NLAYGLKSVDIYGSQAVQEVVTQPPFSGGF-YPDFFTRPPSAP--ALRFHEITPGLEFSC 124 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA-----YCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + +P+ H R + GF + Y +D + + +++ N + LII+ Sbjct: 125 ENYQILPLSVPHSR-DTTGFLVKDAGGHSFFYTSDTGSGLGDVWQQI-NPELLIIELTMP 182 Query: 212 GL------HSSHFS---LSESLKKIELIN---PKNAILTHMHVDLDYD------MVLKST 253 S H S L L+ + P+ L H + + V + Sbjct: 183 NRLTELALSSKHLSSELLEAELRLFRELKGYLPRIVTL-HTTPLFEAEIKTEIQAVAERL 241 Query: 254 PSRVVPAFDGMQFSS 268 + ++ A +G++ Sbjct: 242 HTDILMASEGLKLRL 256 >gi|58580887|ref|YP_199903.1| hydrolase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622818|ref|YP_450190.1| hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578138|ref|YP_001915067.1| hydrolase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58425481|gb|AAW74518.1| hydrolase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366758|dbj|BAE67916.1| hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188522590|gb|ACD60535.1| hydrolase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 334 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 25/172 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + + + TH H+DH + + + Sbjct: 83 DGQPYLIDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLHTAVH 142 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F ++ + PP I + D P + Sbjct: 143 LYGPPG-----IARMVDAFVEMNAIDIEARIREEGRPPFKARIHVHEFDQPGTV-LTNDQ 196 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI 205 + L H + + +RF +V + D PA + E ++ D L+ Sbjct: 197 VTVTATLVDHYTLRPAFAYRFEARDRSVVFSGDTRYLPALA-EFAKDTDILV 247 >gi|73945504|ref|XP_533401.2| PREDICTED: similar to Zinc phosphodiesterase ELAC protein 1 (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29) isoform 1 [Canis familiaris] Length = 221 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P +S + R + D G Sbjct: 2 SMDVTFLGTGAAYPSPTRG-----------------ASALVLRC----EGECWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVTKQPIEIYGPAGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ + + + +P +V+ +V + P Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCP 131 >gi|220934008|ref|YP_002512907.1| beta-lactamase domain protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995318|gb|ACL71920.1| beta-lactamase domain protein [Thioalkalivibrio sp. HL-EbGR7] Length = 260 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 58/218 (26%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T V+VD G + + L IDAVL TH H+DH+ + + +R Sbjct: 28 GRTRVMVDCGFSVAETERRLARLGLAPEDIDAVLITHEHSDHVG---SAAAFSRRHRR-- 82 Query: 107 DVYAAPDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 V+ L ++ F +I ++ A G + P Sbjct: 83 QVWLTAGTYDALRDTDFH---------------ALRIIHAHE-----PLALGDLAIDPYP 122 Query: 166 QQHGR------ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + S G R + TD + L L+++ L G Sbjct: 123 VPHDAREPCQFVLSDGDR--RLGLLTDAGSVTPHMRRVLDGCHALLLECNHDVQMLATGP 180 Query: 214 HS-----------SHFSLSESLKKIELINPKNAILTHM 240 + H + +++ + ++ LTH+ Sbjct: 181 YPESLKRRVGGDYGHLANTQAEALLAEMDTSR--LTHL 216 >gi|77408372|ref|ZP_00785113.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|77413062|ref|ZP_00789263.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77160855|gb|EAO71965.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77173053|gb|EAO76181.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|319744746|gb|EFV97088.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 269 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ L +K + Sbjct: 25 PQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + E + V + + G ++ Sbjct: 80 DIYANEQTWKVMDERNM-------------LGKVDVSQKHVFGRGKTLTFGDLDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMASLIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + S I I K+ L H+ +L + + + Sbjct: 187 TLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMENNL 242 >gi|330718653|ref|ZP_08313253.1| beta-lactamase superfamily hydrolase [Leuconostoc fallax KCTC 3537] Length = 318 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLEER--NAVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + +H H DHI G+ G R + + P+ +Y + Sbjct: 43 QHQILKTTLRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGANRNEPLTIYGPKGVQDFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + R P+ +E I +EA+P+ RI + G+R Sbjct: 103 KT----ALRVSETRLTYPV---HYVETTS-GIIFDDDTFTVEALPLKH---RIETWGYRV 151 >gi|291556286|emb|CBL33403.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Eubacterium siraeum V10Sc8a] Length = 263 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 89/265 (33%), Gaps = 71/265 (26%) Query: 26 GACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-------LSIDA 78 C + S+ + S + V+VD G F LRE + ++ A Sbjct: 6 PVCSSSKGN------SVFV-----GDSTSGVLVDAGCSFK--ALREGLALCGIPFEAVKA 52 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 VL TH H DH + + ++ + VYA+ + L F I Sbjct: 53 VLVTHEHIDHTKALG-----QITKRTSVPVYASDGTARKL-------FSDKLVEQTAVIH 100 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--RFG--NVAYCTDVNAFPAES 194 I++ V + + H S+G+ +FG VA CTD+ E Sbjct: 101 PLSEIKSVPVDMDIDF---------FHTPHDAEESVGYTLKFGEHKVACCTDLGYVTDEV 151 Query: 195 LEKLQNLDFLIIDA----------------LKNGLHSSHFSLSE--SLKKIELINPK--- 233 + L D + I+A LK + H LS S + + K Sbjct: 152 RDNLLGSDTVYIEANYDPLLLKGNPKYPPYLKTRISGDHGHLSNGCSAEFCRELVAKGAS 211 Query: 234 NAILTHMHVD-----LDYDMVLKST 253 IL H+ + + Y+ V K+ Sbjct: 212 RLILGHLSQENNSPKMAYEAVEKTL 236 >gi|159184692|ref|NP_354295.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] gi|159139982|gb|AAK87080.2| metal dependent hydrolase [Agrobacterium tumefaciens str. C58] Length = 555 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 76/221 (34%), Gaps = 46/221 (20%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++VD G F + + EQ ++ ++ TH H DH ++ Sbjct: 28 GPESKRQWIMVDCGVTFAGPDLPGVDLVLPDISYIAEQKKNLKGIIITHAHEDHYGAMND 87 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIE 144 L + VYA+P L Y FKA D V P IE Sbjct: 88 LWP-----GLNVPVYASPFTAGMLEAKRAYEGTRAEIPVTIFKAGDRIN----VGPFEIE 138 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQN 200 V + +I P+ G + G ++ ++ TD F A E Sbjct: 139 AVGVNHSIPEPMSLIIRTPL----GNVIHTGDWKIDEAPSLGPLTDEARFRAIGEE---G 191 Query: 201 LDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + L+ D AL++G+ S +SE L++I +T Sbjct: 192 VLALMCDSTNALRDGVSPSEHEVSEGLRQIIESAEGRVAVT 232 >gi|317503285|ref|ZP_07961337.1| metallo-beta-lactamase superfamily protein [Prevotella salivae DSM 15606] gi|315665591|gb|EFV05206.1| metallo-beta-lactamase superfamily protein [Prevotella salivae DSM 15606] Length = 267 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 78/237 (32%), Gaps = 50/237 (21%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++I+D G L++ + ++ +L TH H DH+ + L + Sbjct: 21 EKDSLIIDAGVGIRT--LKKHFKNYGLHLEDVNHLLITHDHTDHVKSVGSLSKDY----- 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +DVY + + + Y K + T+ ++ G P Sbjct: 74 NLDVYTTKRVHEGIEHN--YFIKKRIEPTHKKVIE----------KGTTYTIGDFIVTPF 121 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H ++G+ TD+ E + ++L+I+A L +G + Sbjct: 122 GVPHDSSDNVGYMIKYGDTTFVLMTDIGHITTEMQTFIGEANYLVIEANHDIEMLTHGTY 181 Query: 215 SSHF---------SLS-----ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 H LS E++ K L H+ + ++ ++ + T V Sbjct: 182 PQHLKNRILGLDGHLSNAACGEAIATFATPRLKKVWLCHLSEENNHPILAQKTIEDV 238 >gi|323967712|gb|EGB63124.1| ribonuclease BN [Escherichia coli M863] gi|323977530|gb|EGB72616.1| ribonuclease BN [Escherichia coli TW10509] gi|327252541|gb|EGE64200.1| ribonuclease Z [Escherichia coli STEC_7v] Length = 305 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 86/305 (28%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTRSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------ 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQPLTIYGPQGLREFV 101 Query: 113 -----------------------------------DCMKHLFESFRYCFKALDDRTYPPI 137 M+H E + Y +++ P Sbjct: 102 ETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGY---RIEEHDKPGA 158 Query: 138 VNPIVIENNDVP----ICMKSAGGVIEAIPILQQHG----RISSLG---FRFGNVAYCTD 186 +N ++ VP AG I Q +G G FG+ C Sbjct: 159 LNAQALKAAGVPPGPLFQALKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPC-- 216 Query: 187 VNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +L+ + +D ++ +A H S ++ I+TH+ Sbjct: 217 -----DAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHV 271 Query: 241 HVDLD 245 D Sbjct: 272 SSRYD 276 >gi|118469822|ref|YP_889157.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Mycobacterium smegmatis str. MC2 155] gi|118171109|gb|ABK72005.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Mycobacterium smegmatis str. MC2 155] Length = 252 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 79/251 (31%), Gaps = 49/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S + D A S ++ +++D G Sbjct: 1 MRLTILGCSGS----VVGPDSPA------------SGYLVTAP----DTVPMVIDFGGGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHL 118 + R + VL +H HADH + GL + ++ P+ +Y L Sbjct: 41 LGALQRYADPNTVNVLLSHLHADHCLDLPGL--FVWRRYHPMPATTRGVLYGPAQTWTRL 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + + N + ++ P L H S G RF Sbjct: 99 GMA-----SSPEGGEVDDFSDIFEVRNW-----VDGQSVTLDVTPRLVCHPT-ESYGMRF 147 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIEL 229 + + Y D + +E + D + +A + H S +E+ + Sbjct: 148 TDPSGATLVYSGDT-GYCDALVELARGADIFLCEASWTHDPSRPPRLHLSGTEAGRAAAE 206 Query: 230 INPKNAILTHM 240 +LTH+ Sbjct: 207 AGVGELLLTHI 217 >gi|118431611|ref|NP_148202.2| ribonuclease Z [Aeropyrum pernix K1] gi|41017587|sp|Q9YAV8|RNZ_AERPE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116062935|dbj|BAA80840.2| ribonuclease Z [Aeropyrum pernix K1] Length = 310 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 61/330 (18%), Positives = 111/330 (33%), Gaps = 83/330 (25%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILG G++ VP + R S+ + + TV++D G Sbjct: 2 GRIDITILGSGSA--VPSL--------------HRWHPSILV----KDWMGNTVLLDAGE 41 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHL 118 +++ + V SID + THPH DHI+G+ GL +++P+ + + + ++ + Sbjct: 42 GVQIRLRKVGVSPSSIDVLAITHPHGDHINGVAGLLMTMSLQSRRKPLTIISTSESLEFI 101 Query: 119 FES---------FRYCFKALDDRTY---------------------------------PP 136 E+ F + P Sbjct: 102 SETLEATRENLGFEVMLVDARESGVLDVGRPSGDRLTIEWERACHNIESLAFKLVWTLRP 161 Query: 137 IVNPIVIENNDVP----ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 ++ ++E D+ I G + IS+ G R +VAY D + Sbjct: 162 RIDARILERLDLKAGPWIRELIEKGRAHVEGRIVTLKDISASGERKYSVAYTGDTSPCT- 220 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH---VD 243 + L D LI D+ + H + ++ + K IL H+ Sbjct: 221 RVAKFLHGSDILIHDSTLDSSLAREAAERGHSTSLDAARNALTSGAKLLILFHVSSRYSG 280 Query: 244 LDYDMVLKSTP---SRVVPAFDGMQFSSPI 270 + ++LK V ++DGM+ S I Sbjct: 281 YEARLLLKEARRVFPNTVLSWDGMKLSITI 310 >gi|145223256|ref|YP_001133934.1| ribonuclease Z [Mycobacterium gilvum PYR-GCK] gi|315443716|ref|YP_004076595.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium sp. Spyr1] gi|189043787|sp|A4T2G4|RNZ_MYCGI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|145215742|gb|ABP45146.1| beta-lactamase-like protein [Mycobacterium gilvum PYR-GCK] gi|315262019|gb|ADT98760.1| metal-dependent hydrolase, beta-lactamase superfamily III [Mycobacterium sp. Spyr1] Length = 286 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 86/269 (31%), Gaps = 64/269 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P RR S + + T +VD G Sbjct: 2 IEVTLLGTGS----PI------------PDARRAGPSTLVRAGGQ-----TFLVDCGRGV 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---------VYAAPD 113 + V I A+L TH H+DHI + + + Sbjct: 41 LQRAAAVGVGANQISALLLTHLHSDHIADLGDVL-ITRWVSNFAPDLPPLPIIGPPGTAE 99 Query: 114 CMKHLFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--GVIEAIPILQQ 167 ++++ ++F Y DD T PP V + + V + + G + P+ Sbjct: 100 VVENMLKAFSFDIGYRIAHHDDLTTPPPVEVEEVTDGVVWGRDEVSIRVGPTDHRPVT-- 157 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLI--------IDALKNGLH 214 ++GFR +V D P L+KL L+ I+AL Sbjct: 158 ----PTIGFRIEHHGASVVLAGDT--VPCRGLDKLAAGAGALVHTVIRRDLIEALPMQRI 211 Query: 215 SS----HFSLSESLKKIELINPKNAILTH 239 H S+ ++ + ILTH Sbjct: 212 RDICDYHSSVEQAAETATRAGVGILILTH 240 >gi|307570470|emb|CAR83649.1| beta-lactamase superfamily protein [Listeria monocytogenes L99] Length = 259 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 36 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 90 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 91 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDT 134 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 135 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 191 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 192 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 239 >gi|46907164|ref|YP_013553.1| hypothetical protein LMOf2365_0951 [Listeria monocytogenes str. 4b F2365] gi|47092139|ref|ZP_00229932.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|226223549|ref|YP_002757656.1| hypothetical protein Lm4b_00949 [Listeria monocytogenes Clip81459] gi|254823800|ref|ZP_05228801.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|254852423|ref|ZP_05241771.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|254931314|ref|ZP_05264673.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|255522404|ref|ZP_05389641.1| hypothetical protein LmonocFSL_14527 [Listeria monocytogenes FSL J1-175] gi|300764139|ref|ZP_07074134.1| metal-dependent hydrolase [Listeria monocytogenes FSL N1-017] gi|46880431|gb|AAT03730.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b str. F2365] gi|47019579|gb|EAL10319.1| conserved hypothetical protein [Listeria monocytogenes str. 4b H7858] gi|225876011|emb|CAS04717.1| Hypothetical protein Lm4b_00949 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605731|gb|EEW18339.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|293582864|gb|EFF94896.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293593022|gb|EFG00783.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|300515129|gb|EFK42181.1| metal-dependent hydrolase [Listeria monocytogenes FSL N1-017] gi|328466952|gb|EGF38055.1| hypothetical protein LM1816_12987 [Listeria monocytogenes 1816] Length = 243 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKPDDR 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAGDKVFVYTAD-SAYQDSFIPFSEGADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|224477934|ref|YP_002635540.1| hypothetical protein Sca_2452 [Staphylococcus carnosus subsp. carnosus TM300] gi|222422541|emb|CAL29355.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 263 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 49/223 (21%) Query: 50 RGSNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++VD G ++ + + ++ +L TH H DHI G+ L +K Sbjct: 19 ESDKGSLLVDVGLTGKKMEELFGKIDRNIEDLNGILVTHEHVDHIKGLG-----VLARKY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA K + + + P+ + + + G + Sbjct: 74 KLPIYANEKTWKAIEK----------KDSKIPMDQKFIFNPYE-----THSLGGFDIESF 118 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H I + F TD ++ D + +D L+ + Sbjct: 119 NVSHDAIDPQFYIFHNDYKKFTMITDTGYVSDSMKGMIRGSDAFMFESNHDVDMLRMCRY 178 Query: 215 S-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 H S + ++ ++I + K L+H+ D Sbjct: 179 PWKTKQRILGDMGHVSNEDAAMAMCDVITGSTKRIYLSHLSRD 221 >gi|296876107|ref|ZP_06900161.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] gi|296432818|gb|EFH18611.1| beta-lactamase superfamily I metal-dependent hydrolase [Streptococcus parasanguinis ATCC 15912] Length = 285 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 41 PKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 95 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + + Y V+ + + + G I+ Sbjct: 96 DLYANEATWKAM-----------EGTKYLGKVD--DAQKHIFEMGKTKTFGDIDIESFGV 142 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD + + D +LI ++ L+ G ++ Sbjct: 143 SHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRLAGIVADADGYLIESNHDVEILRAGSYAW 202 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I + K L H+ +L + + + Sbjct: 203 RLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMENQLARAD 262 Query: 257 VVPAFD 262 + D Sbjct: 263 LAVGHD 268 >gi|271499410|ref|YP_003332435.1| beta-lactamase superfamily hydrolase [Dickeya dadantii Ech586] gi|270342965|gb|ACZ75730.1| beta-lactamase superfamily hydrolase [Dickeya dadantii Ech586] Length = 255 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 70/206 (33%), Gaps = 26/206 (12%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVL---REQVLSIDAVLYTHPHADHIHGID 93 R +++++S + ++VD GP Q L + ++A+ TH H DH+ G+ Sbjct: 16 RVNAAIRVSE-----NGFQLLVDCGPTV-PQALWQRQTAPDDLNAIYITHAHPDHVLGLT 69 Query: 94 GLRGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + + P+ + A + L + + F T P+ ++ + Sbjct: 70 TWLNWCESCGRTAPLTIIAPRAQQQQLRQLADFAFWP----TGRPLFTLHWQDSESL--- 122 Query: 152 MKSAGGVIEAIPILQQHGRISSLGF---RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 S G +H + + + G++ Y D A S + L D +++ Sbjct: 123 --SELGPWHCQTAPTRHSVPNRALYLSGKQGSLFYSGD-GQLTAASADLLSGADLALVEC 179 Query: 209 LKNGLHSS--HFSLSESLKKIELINP 232 + H + + Sbjct: 180 FSPQATGNAWHGNWPQVQTLARKPGA 205 >gi|284801261|ref|YP_003413126.1| hypothetical protein LM5578_1011 [Listeria monocytogenes 08-5578] gi|284994403|ref|YP_003416171.1| hypothetical protein LM5923_0965 [Listeria monocytogenes 08-5923] gi|284056823|gb|ADB67764.1| hypothetical protein LM5578_1011 [Listeria monocytogenes 08-5578] gi|284059870|gb|ADB70809.1| hypothetical protein LM5923_0965 [Listeria monocytogenes 08-5923] Length = 259 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 36 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 90 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 91 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDT 134 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 135 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 191 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 192 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 239 >gi|217964970|ref|YP_002350648.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes HCC23] gi|224499469|ref|ZP_03667818.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes Finland 1988] gi|224503102|ref|ZP_03671409.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes FSL R2-561] gi|217334240|gb|ACK40034.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes HCC23] Length = 243 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|124512010|ref|XP_001349138.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] gi|23498906|emb|CAD50984.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] Length = 1032 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 30/128 (23%) Query: 2 KDYYHFTILGCG-----ASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV 56 K + LG G S G +S I + ++ N Sbjct: 391 KSDWKLIFLGTGSMYPSTSRG----------------------TSSFIFQTIKKKCNEAF 428 Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 + D G + ++ + + + I + TH H DH G+ + I++Y Sbjct: 429 LFDCGENTFIALQKANIKVSKIKNIFITHLHGDHCLGLISVLTMLRNM-NTINIYGPEGL 487 Query: 115 MKHLFESF 122 + L +F Sbjct: 488 YRFLKNNF 495 >gi|319744401|gb|EFV96760.1| metallo-beta-lactamase [Streptococcus agalactiae ATCC 13813] Length = 258 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 38/216 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 +S ++ +N +++D G ++ +E L +DAV+ +H H DH+ + Sbjct: 20 TSFLLTGE----NNFHLLIDAGSRSINELEKEISPLDLDAVIISHYHPDHVADLGVLYHY 75 Query: 96 RGYFLKQK---RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 R + K K + + VY DD + + P V + Sbjct: 76 RLLYPKDKWEPKVLPVYG----------------HNEDDYEFSKLTLPNVAQGIAYHTNG 119 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLII 206 G I H + R + + + D F + + D + Sbjct: 120 VEQVGPFNITFIKTVH-PVVCYAMRITDRETGQVLVFTGDSGYFADL-VPFTKGADLFLA 177 Query: 207 DALKN---GLHSSHFSLSESLKKIELINPKNAILTH 239 D H +H + E+ + K +LTH Sbjct: 178 DVYLYEGNENHIAHLTSKEAGEIAYNAKVKKLVLTH 213 >gi|294083866|ref|YP_003550623.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292663438|gb|ADE38539.1| beta-lactamase-like protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 297 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 100/310 (32%), Gaps = 65/310 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G P + G S+ + ++ ++++D G Sbjct: 7 INLTLLGT---KGGPSLRGKGP--------------SMMPTSSHLAIADKSIVIDCGLGV 49 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 ++ + I + TH H+DH + L + +P+ VY P + L+ Sbjct: 50 TSGLVNAGYKLTDITHIFITHYHSDHCLELGALLHTAWTAGLSKPVQVYGPPG-LDKLWN 108 Query: 121 SFRYCFK-----ALDDRTYPPIVNPIVIE-----NNDVPICMKSAGGVIEAIPILQQHGR 170 FR+ + D P+ + + N + I H Sbjct: 109 GFRHMMTFDIELRIVDEGRLPLDDMVAFHTYSDVNAPGEAFSIMYDDDLRVSAIKNNHPP 168 Query: 171 I-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA----------------- 208 I + RF + + D ++ + D L+ +A Sbjct: 169 IVETYALRFDAGDKAITFSGDTTYL-DAMIDFAKKSDVLVHEAMLSSGIDYVVGQTKTGN 227 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH-------MHVDLDY-DMVLKSTPSRVV 258 L+ L +SH S++ + + K +L H + D D+ V + + Sbjct: 228 EQLRKHLVASHTLASQAGSIAKEADVKCLMLNHLIPPEREISSDDDWLADVKNTFDGHCL 287 Query: 259 PAFDGMQFSS 268 FDG++++ Sbjct: 288 IGFDGLKYTI 297 >gi|254827875|ref|ZP_05232562.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258600256|gb|EEW13581.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] Length = 243 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGYK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKPDDR 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAGDKVFVYTAD-SAYQDSFIPFSEGADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAREANVKSLLLSHLPEVGDLEVLKQE 223 >gi|149187495|ref|ZP_01865793.1| beta-lactamase-like protein [Vibrio shilonii AK1] gi|148839031|gb|EDL55970.1| beta-lactamase-like protein [Vibrio shilonii AK1] Length = 542 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 65/299 (21%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 + + T +G P I P +S+ + G+ + D Sbjct: 116 LTNEMRVTFMGTS-----PMI----------RPGQA--NTSIYVEL----GNGDNFVFDI 154 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYA----- 110 G + V +D + TH H DH + L + R P+ +Y Sbjct: 155 GEASIANYIGAGVALNELDKIFITHLHVDHFGSLPYLYQFGGWNGRWEKPLTIYGPSGRN 214 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG----VIEAIPILQ 166 D +H+ E D + + IE + ++ + Sbjct: 215 PEDGTRHMVEGMLQMLSWHQD-AFDVFPSGNDIEVVEFDFKDDGGIIYDVDGVKVSHWRR 273 Query: 167 QHGRISSLGFRFGN---------VAYCTDVNAFPAESLEKLQNLDFLI------------ 205 H + + +R + D ++ + D + Sbjct: 274 SHAKDGASAYRLDWTINDEESLCFVWTGDGRP-TELDIQYAKGCDLFVTEVQTELVGLAS 332 Query: 206 ----IDA-LKNGLHSSHFSLSESLKK-IELINPKNAILTHMHVDLDY-DMVLKSTPSRV 257 + A L +H + + + I P+ + THM D Y + + Sbjct: 333 IVQGVPAFLTRYTIDTHHTSGYAAGWLADQIQPRLFMTTHMEFDPYYNNETVAQVREHW 391 >gi|104773349|ref|YP_618329.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513330|ref|YP_812236.1| beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422430|emb|CAI96979.1| Hydrolase (Metallo-beta-lactamase family ) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092645|gb|ABJ57798.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325124954|gb|ADY84284.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 265 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 52/253 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGID 93 SL ++ +++D G + + + +D V +H H DH G+ Sbjct: 13 NCSLLMT------DQHKILMDAGLSGKKTKELLAKVGVAIEDLDMVFLSHDHGDHSGGM- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 G +++ ++ ++ K+L E+ P VIE Sbjct: 66 ---GVLMRRYPQLNAFSNTVTWKYLEET--------GKIGCLPKDQINVIEPGQTK---- 110 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 G +E H + F +A TD E ++Q+ D +++ Sbjct: 111 -CYGDLEVTAFATSHDAAQPQYYVFSSGGKRLACLTDTGYVSEEVEYEIQDADAYLLEFN 169 Query: 208 ----ALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMV 249 L++G + H S ++ + + + K+ + H + + + Sbjct: 170 YDDLMLRSGPYPWSLQQRVRSDHGHLSNEQAAETLARVISSKTKHVFMAHRSQQNNLNYL 229 Query: 250 LKSTPSRVVPAFD 262 + V+ A D Sbjct: 230 ARDVAEEVLAARD 242 >gi|47096217|ref|ZP_00233815.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|254898897|ref|ZP_05258821.1| hypothetical protein LmonJ_03750 [Listeria monocytogenes J0161] gi|254911615|ref|ZP_05261627.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935941|ref|ZP_05267638.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015362|gb|EAL06297.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a F6854] gi|258608529|gb|EEW21137.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589562|gb|EFF97896.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 243 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDR 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAGDKVFVYTAD-SAYQDSFIPFSEGADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAREANVKSLLLSHLPEVGDLEVLKQE 223 >gi|326435085|gb|EGD80655.1| hypothetical protein PTSG_11699 [Salpingoeca sp. ATCC 50818] Length = 888 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 52/286 (18%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G P R S + + +++D G + Sbjct: 607 IVFLGTG----------------SAEPSKYRGSSGIVVET-----KKGHMLLDAGAGVFN 645 Query: 67 QVL--------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 ++ +V + V +H HADH G+ + + + + P + Sbjct: 646 SMVHLYGHTGAASRVCCVRMVWISHKHADHALGVLRIA----EVRAALSAVLDPLLIVVP 701 Query: 119 FESFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHG---RI 171 + + + L R + E+ +A +E + QH R Sbjct: 702 HQINAWLHETLVSRPLLRRACEIVSFEDLSSRFFTFNAVHALELSSFASVRVQHCADARA 761 Query: 172 SSLGFRFGN-VAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHS------SHFSLSES 223 + + +R G+ +AY D P+++ +D L+ +A +H + E+ Sbjct: 762 AVIRWRDGSSLAYSGDCR--PSKAFTAAATGVDVLVHEATFESALHDHALRKNHATADEA 819 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR--VVPAFDGMQFS 267 + K+ ILTH + + A DG+ ++ Sbjct: 820 VAVATDAQCKHLILTHFSQRYPVTPRFERVGAGRTATVAHDGLHWT 865 >gi|322389963|ref|ZP_08063503.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321143399|gb|EFX38837.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 285 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 41 PKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 95 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + + Y V+ + + + G I+ Sbjct: 96 DLYANEATWKAM-----------EGTKYLGKVD--DAQKHIFEMGKTKTFGDIDIESFGV 142 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD + + D +LI ++ L+ G ++ Sbjct: 143 SHDAAAPQFYRFMKDGKSFVMLTDTGYVSDRLAGIVADADGYLIESNHDVEILRAGSYAW 202 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I + K L H+ +L + + + Sbjct: 203 RLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMENQLARAD 262 Query: 257 VVPAFD 262 + D Sbjct: 263 LAVGHD 268 >gi|239994812|ref|ZP_04715336.1| beta-lactamase-like protein [Alteromonas macleodii ATCC 27126] Length = 280 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 90/264 (34%), Gaps = 54/264 (20%) Query: 5 YHFTILGCGASLGVP-----RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 T G S+ P R G+ AC + I T +I+D Sbjct: 1 MRLTFYGVRGSIPTPGAAYVRYGGN-TAC-------------VHIELE----DGTDIILD 42 Query: 60 TGPDFYMQVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +G VL E+++ D +L +H H DHI G + R I++Y Sbjct: 43 SGTGIR--VLGERLIQKDTPINLLLSHNHWDHIQGFPFFAPI-YQASREINIY-PGQT-- 96 Query: 117 HLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRIS 172 L + K ++ +P + + + + + G + H GR S Sbjct: 97 -LLDEPDQILKQMEGSLFPVPRSALKANISIVDIPKSTSRFSVGSATITRLAMNHPGRGS 155 Query: 173 SLGFRFGN--VAYCTDVNAFPAESLE--------KLQNLDFLIIDA---LKNGLHSS--- 216 + + VAY TD +P E QN D LI DA L + + Sbjct: 156 AYCIEADDAKVAYITDNELYPPYKKETDFIDFAKFAQNADLLIHDAQYMLSDMPAKNGWG 215 Query: 217 HFSLSESLKKIELINPKN-AILTH 239 H E++K N K A+ +H Sbjct: 216 HSVAEEAVKLAMACNAKKLALYSH 239 >gi|227504001|ref|ZP_03934050.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] gi|227199395|gb|EEI79443.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] Length = 255 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 85/282 (30%), Gaps = 45/282 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP +S + + ++++D GP Sbjct: 1 MKLTILGC--SGSVPVPGNA---------------ASGYVVSFPDAP---SIVMDMGPGT 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL---------KQKRPIDVYAAPDCM 115 ++ Q + ++H HADH L + + +A Sbjct: 41 LARLQEVQDPCDAHITFSHLHADHCLDFPSLMVWRRFHPTAPAASRNFCIGPEHAPRHLG 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + D + P ++ +DV + +EA + +H + Sbjct: 101 RLSADEVDGVDDMSDTFAFSPWIDRERQLLDDVYMTPFRVIHPVEAYALRMEHAKTGKT- 159 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIELI 230 +AY D AF ++ + D + +A + + H S +E+ + Sbjct: 160 -----IAYSGDT-AFTPALVDAARGADVFLCEAAWGETSEGKAPNMHMSGAEAGRVARES 213 Query: 231 NPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGMQFSS 268 +L H+ D ++ GM+F Sbjct: 214 GVAKLVLVHLQPWGDTAATLRAAQAEFKGEIILGAPGMEFEL 255 >gi|218132320|ref|ZP_03461124.1| hypothetical protein BACPEC_00178 [Bacteroides pectinophilus ATCC 43243] gi|217992835|gb|EEC58836.1| hypothetical protein BACPEC_00178 [Bacteroides pectinophilus ATCC 43243] Length = 304 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 94/314 (29%), Gaps = 81/314 (25%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 G S +P R +SL + + +++++D G + V + Sbjct: 9 GTSGMMPLPG--------------RWLTSLMLRY-----NGSSLLIDCGEGTQVAVKEKG 49 Query: 73 --VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFES------- 121 ID + TH HADHI G+ GL + P+ + K + Sbjct: 50 WSFKPIDILCITHFHADHISGLPGLLLTMGNADRTEPLTIIGPKGLTKVVNALRVIAPEL 109 Query: 122 -FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI---------------- 164 F L++ ++ +I+ V + G + Sbjct: 110 PFEIRCIELENPQEHFELSGYIIDAFKVNHAVTCYGYSVSIARTGRFNVEQAVARGIPKS 169 Query: 165 ---LQQHG-RISSLG-----------FRFG-NVAYCTD---VNAFPAESLEKLQNLDFLI 205 QHG + S G R G V YCTD V A + D I Sbjct: 170 CWNRLQHGQTVESDGNVYTPDMVMGESRKGIKVTYCTDSRPVKAIAENA----SGADLFI 225 Query: 206 IDALK-------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 + + N H + SE+ K + K LTH L + + + Sbjct: 226 CEGMYGDNDKDGNARKYKHMTFSEAAKLAKEAGVKQMWLTHYSPSLVRPKEYIRSATDIF 285 Query: 259 PA----FDGMQFSS 268 PA DG+ Sbjct: 286 PATRAGKDGLSVEL 299 >gi|313673853|ref|YP_004051964.1| hypothetical protein Calni_1897 [Calditerrivibrio nitroreducens DSM 19672] gi|312940609|gb|ADR19801.1| hypothetical protein Calni_1897 [Calditerrivibrio nitroreducens DSM 19672] Length = 251 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 46/188 (24%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 ++ +H H DHI G+ + F D++ D K+L + Sbjct: 49 SLFISHEHVDHIKGLKYFQSIF-----DGDIFCGFDTAKYLHDLGH-------------- 89 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 + I+ + + P H GF+F +++ TD + Sbjct: 90 -DTANIKIIEPDHLFDF--NKWQVYPFRLSHDSADIFGFKFNFNNVLISFVTDTGEVSRD 146 Query: 194 SLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELI---NPK 233 E + D L ++A L NG + H S +++K I I K Sbjct: 147 IFEIITGSDILFLEANYEEEMLVNGKYPQHLKKRILSRKGHLSNKDAIKTIHEIYDRRLK 206 Query: 234 NAILTHMH 241 + +H+ Sbjct: 207 KILFSHIS 214 >gi|227879077|ref|ZP_03996966.1| ribonuclease Z [Lactobacillus crispatus JV-V01] gi|256843066|ref|ZP_05548554.1| ribonuclease Z [Lactobacillus crispatus 125-2-CHN] gi|256850282|ref|ZP_05555711.1| ribonuclease Z [Lactobacillus crispatus MV-1A-US] gi|293381292|ref|ZP_06627295.1| ribonuclease Z [Lactobacillus crispatus 214-1] gi|312977251|ref|ZP_07788999.1| ribonuclease Z [Lactobacillus crispatus CTV-05] gi|227861318|gb|EEJ68948.1| ribonuclease Z [Lactobacillus crispatus JV-V01] gi|256614486|gb|EEU19687.1| ribonuclease Z [Lactobacillus crispatus 125-2-CHN] gi|256712919|gb|EEU27911.1| ribonuclease Z [Lactobacillus crispatus MV-1A-US] gi|290922108|gb|EFD99107.1| ribonuclease Z [Lactobacillus crispatus 214-1] gi|310895682|gb|EFQ44748.1| ribonuclease Z [Lactobacillus crispatus CTV-05] Length = 312 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SS+ + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSSVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + + + +H H DHI G+ GL R + PI +Y + + Sbjct: 43 QHQILRTNIKLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PITIYGPSGIEEFVR 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 AL + +E + + G + + RI S GFR Sbjct: 102 T-------ALKVSRTKISYSIRFVELAKSGLICEDKGFRVYTEQLDH---RIPSFGFRV 150 >gi|166711190|ref|ZP_02242397.1| hydrolase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 334 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 25/172 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++D G Q+ + + + + TH H+DH + + + Sbjct: 83 DGQPYLIDCGNGVAQQLAKAGIRLPMLRDIFLTHHHSDHNADLLNVVWLAWASGLHTAVH 142 Query: 108 VYAAPDCMKHLFESFRYCFKALD---------DRTYPPIVNPIVIENNDVPICMKSAGGV 158 +Y P F ++ + PP I + D P + Sbjct: 143 LYGPPG-----IARMVDAFVEMNAIDIEARIREEGRPPFKARIHVHEFDKPGTV-LTNDQ 196 Query: 159 IEAIPILQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI 205 + L H + + +RF +V + D PA + E ++ D L+ Sbjct: 197 VTVTATLVDHYTLRPAFAYRFEARDRSVVFSGDTRYLPALA-EFAKDTDILV 247 >gi|300789684|ref|YP_003769975.1| pyrroloquinoline quinone biosynthesis protein B [Amycolatopsis mediterranei U32] gi|299799198|gb|ADJ49573.1| pyrroloquinoline quinone biosynthesis protein B [Amycolatopsis mediterranei U32] Length = 275 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 43/195 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C R++ + IS +++ PD Sbjct: 1 MKVILLGTAAGGGCPQWNCACRLCTSGLVP--RSQDCVAISADGAGW----YLLNCSPDI 54 Query: 65 YMQV-----LREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ LR + VL T DH G+ L++ + V+A + Sbjct: 55 RAQILGTPELRAGPGPREIPLRGVLLTDAELDHALGL-----LMLRESGGLPVWAPSAVL 109 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L F+A+ D Y +++ G +E +P+ + + +S G Sbjct: 110 AALS-----PFRAIVD-GYGGWTWSSLVD---------VPGLRVEVLPVSDKRPKYASAG 154 Query: 176 --------FRFGNVA 182 +R + A Sbjct: 155 SGGPWVVAYRISDPA 169 >gi|134300825|ref|YP_001114321.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053525|gb|ABO51496.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 328 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 69/229 (30%), Gaps = 46/229 (20%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQK-RPID 107 + VD GP + + S+D + +H H DH G + + R Sbjct: 67 DGLRLYVDPGPGAVVRAREAGLDLGSLDGIFISHGHLDHYAGAEAVIEAMCWGMFVRRGV 126 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V A ++ Y Y ++E + G + PI Sbjct: 127 VLAPRQVLERDRLLSIYHQGKDRLSGYKGGPTVRILEAHQ-----PMPIGKVALTPIPAY 181 Query: 168 HGRISSLGFRFG----NVAYCTDVNAF-----PAES----------------------LE 196 HG + GF + Y +D N P S E Sbjct: 182 HGE-ENYGFILQTESLTLGYTSDTNYIQGYTTPEGSKDLSYRGPIMDLIDIVDYRTDIKE 240 Query: 197 KLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI---NPKNAILTHMHV 242 +D LI + + ++ +H ++ +L L+ K I+TH + Sbjct: 241 AFSQVDVLIANVTSHNVY-AHRHIT-TLGLAHLLRGSKVKLCIMTHFNH 287 >gi|325507777|gb|ADZ19413.1| Metal-dependent hydrolase of the metallobeta-lactamase superfamily [Clostridium acetobutylicum EA 2018] Length = 235 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 29/174 (16%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 R +S I + +++ ++VD G L + + ++ ++ TH H DHI + Sbjct: 15 RGNNSAFI-----KKNSSMILVDCGGTVFHRIKQLNLLQDIKNL-YIIITHTHPDHIGSL 68 Query: 93 DGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 L Y +P +Y D + F D+ ++ +N V + Sbjct: 69 GDLIFYCYYILKFKPTIIYPNKD----IITDFFNIIGVGDEM-------YELVSDNKVNL 117 Query: 151 CMKSAG-GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQ 199 G IE IP G I + GF G V Y D N P + + K++ Sbjct: 118 TAPEFGDLNIEFIPASHV-GVIPAYGFLIGMSDNLVYYSGDGNKLPEKIINKIK 170 >gi|302534338|ref|ZP_07286680.1| ribonuclease Z [Streptomyces sp. C] gi|302443233|gb|EFL15049.1| ribonuclease Z [Streptomyces sp. C] Length = 304 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 86/299 (28%), Gaps = 89/299 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M F +LG + VP T +N R ++ D Sbjct: 1 MSVR-EFVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V I+ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDINRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQK 98 Query: 93 --DGLRGY------FLKQKRPI---------DVY-AAPDCMKHLFESFRYCFKALDDRT- 133 D LR ++ P+ Y + H ESF Y D R Sbjct: 99 FFDRLRYATAYRETVALREEPVAADGVLASGPSYVLEARRLSHPVESFGYRVTEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-----PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 P ++ I+ DV ++ G + + + G RF A+ D Sbjct: 159 VPALLARYGIKGPDVGRIQREGRLERPEGEVTLEAVSEH-----RAGQRF---AFVMDT- 209 Query: 189 AFPAESLEKLQNLDFLII-----DA-LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + D L+I DA ++ H + ++ + ++ +LTH Sbjct: 210 RLCEGVDALAEGCDMLVIESTFLDADVRLAEDHGHLTAGQAARVARHAGVRHLVLTHFS 268 >gi|254382697|ref|ZP_04998054.1| ribonuclease Z [Streptomyces sp. Mg1] gi|194341599|gb|EDX22565.1| ribonuclease Z [Streptomyces sp. Mg1] Length = 301 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 85/295 (28%), Gaps = 85/295 (28%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M F +LG + VP T +N R ++ D Sbjct: 1 MSVR-EFVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V I+ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDINRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQK 98 Query: 93 --DGLRGY------FLKQKRPI---------DVY-AAPDCMKHLFESFRYCFKALDDRT- 133 D LR ++ P+ Y + H ESF Y D R Sbjct: 99 FFDRLRYATAYRETVRLREEPVAGDGALARGPSYTLEARRLSHPVESFGYRISEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P ++ I+ DV I + G + + +H S F D P Sbjct: 159 VPELLARHGIKGPDVGRIQREGRLGGVGLDEVS-EHKPGQSFAFVM-------DTRLCPG 210 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E + D L+I++ + H + ++ + ++ +LTH Sbjct: 211 VD-ELARGCDMLVIESTFLDEDERLATDHGHLTAGQAARTARDAGVRHLVLTHFS 264 >gi|238796891|ref|ZP_04640395.1| Arylsulfatase [Yersinia mollaretii ATCC 43969] gi|238719151|gb|EEQ10963.1| Arylsulfatase [Yersinia mollaretii ATCC 43969] Length = 308 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 80/266 (30%), Gaps = 55/266 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 + +LG G P ++R+ S I +++DTG Sbjct: 22 FTLQLLGSGG----PI------------SDDQRSSSGEIIWWKG----KAAILIDTGSGV 61 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA--PDCMKHL 118 ++ + + +H H DH + L YF Q ID+ Sbjct: 62 FLRFGQSGARMEDLKLIALSHFHTDHTTDLPALLKGAYFFSQPSRIDLVGPMSGGVFPSA 121 Query: 119 FESFRYCFKALDDRTYPPI-------------VNPIVIENNDVPICMKSAGGVIEAIPIL 165 + F F + Y + VN I+ ++ + Sbjct: 122 TQFFDRLFN-HEKGAYAYLSGLYDATDGLQLAVNVKDIDYRAPKAVTVYQDDELKVTALG 180 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGL 213 HG + L FR G + D N E ++ + D L++ DA L Sbjct: 181 IPHGDVPCLAFRVESAKGVIVVSADQNGSRKEFIDFAKGADILVMPTAIDENADATSKYL 240 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H+S + K +NP +L H Sbjct: 241 HASPSVVG---KIAAEVNPGILVLNH 263 >gi|24214818|ref|NP_712299.1| metal-dependent hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|45657666|ref|YP_001752.1| hypothetical protein LIC11800 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195829|gb|AAN49317.1| metal-dependent hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|45600906|gb|AAS70389.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 318 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 92/290 (31%), Gaps = 82/290 (28%) Query: 41 SLKISRVSERGSNTT-----------VIVDTGPDFYM---QVLREQVLSIDAV---LYTH 83 SL +S S G NTT VI+D G +L E L ++TH Sbjct: 49 SLSLSYWSTYGGNTTCIEIRDKKDNLVIIDGGTGIRELGNSILHEGFLEGKGKAKWIFTH 108 Query: 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM------KHLFESFRY-----CFKALDDR 132 H DHI G+ +F + +Y+ + +L E +Y F + Sbjct: 109 THWDHIQGV----PFF------VPLYSPGNVFEFLSSVDNLEERLKYQHSFTHFPVPYEG 158 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN 188 + E P+ I AI +H S +RF ++ + +D Sbjct: 159 FRATKNFKFIPEGKAFPVTE-----SISAISKSVRHPG-GSFSYRFEEEGKSLIFASDA- 211 Query: 189 AFPAESLE-------KLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKN 234 F + +E + D L+ D + S H S S + N K Sbjct: 212 EFNLDEMENIQDYLNYFRGADVLVFDT-QYTFEESLQKIDWGHSSASMATDIALRANVKK 270 Query: 235 AILTHMHVDLDYDMVLKST-------------PSR---VVPAFDGMQFSS 268 ++ H D YD P+ ++ A +G++ Sbjct: 271 LVM--FHHDPSYDDEKLDAVYLRALKYKEMFDPNNRLEIIMAHEGLELEV 318 >gi|254832103|ref|ZP_05236758.1| hypothetical protein Lmon1_12184 [Listeria monocytogenes 10403S] Length = 243 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKPDDR 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAGDKVFVYTAD-SAYQDSFIPFSEGADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAREANVKSLLLSHLPEVGDLEVLKQE 223 >gi|238913522|ref|ZP_04657359.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 309 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 45/331 (13%), Positives = 82/331 (24%), Gaps = 97/331 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M LG S GVP R + + + + D Sbjct: 1 MYGQDGINFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDC 43 Query: 61 GPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMK 116 G Q+L ++ + +H H DH+ G+ GL P+ VY + Sbjct: 44 GEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVRE 103 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + R + P+ IE + G+ + +H + G+ Sbjct: 104 FIATTLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGY 152 Query: 177 RF------------------------------GNVAYCTDVNAFP--------------- 191 R G D Sbjct: 153 RVVEHDKPGALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVA 212 Query: 192 --------AESLEKLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAIL 237 +L Q +D ++ +DA ++ H S ++ + I+ Sbjct: 213 IFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAQEAAVGRLIM 272 Query: 238 THMHVDLDYDMVLKSTPS------RVVPAFD 262 TH+ D + A+D Sbjct: 273 THISSRYDDKGCQRLLAECRAIFPATELAYD 303 >gi|229916219|ref|YP_002884865.1| ribonuclease Z [Exiguobacterium sp. AT1b] gi|259494134|sp|C4L3C2|RNZ_EXISA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|229467648|gb|ACQ69420.1| ribonuclease Z [Exiguobacterium sp. AT1b] Length = 301 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 82/290 (28%), Gaps = 76/290 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ + P+ +N +S ++ SN T ++D G Sbjct: 1 MKLQFLGTGSGM-------------PSKQRN--------VSGLALDLSNVTWLIDCGEGT 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA-------PD 113 Q+L ++ + AV TH H DH+ G+ G L P+ VY Sbjct: 40 QHQMLYTKIKPRKVTAVWVTHLHGDHVFGLPGFLSTRSALDGTAPLTVYGPKGLKKWLEA 99 Query: 114 CMKHLFESFRYCFKALDDRTYPPIV-NPIVIENNDVPICMKSAGGVIE------------ 160 ++ Y + + + ++ + S G I+ Sbjct: 100 TLRVTGSHLGYELTVTEYSDGDTFIQDDHLVTVRKLEHRFPSFGFRIDGPEKPGMLRVDL 159 Query: 161 AIPILQQHGRI-----SSLGFRFGN-----------------VAYCTDVNAFP-AESLEK 197 + G I S F F VA D P + + Sbjct: 160 VRELGVPSGPIYRTIKESDRFEFEGKWYDSKEYVTEPIPGKIVAILGDT--IPCENARKL 217 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 D L+ +A + H + E+ I+TH+ Sbjct: 218 ADGADLLVHEATFMEAEQALARKYGHSTTREATALANACAVGKLIVTHIS 267 >gi|312876928|ref|ZP_07736904.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor lactoaceticus 6A] gi|311796339|gb|EFR12692.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor lactoaceticus 6A] Length = 238 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 41/239 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV----LREQVLSIDAVLYTHPHADHIHGIDG 94 +S SE ++D G + + L E+ +I+ VL TH H+DH+ + Sbjct: 21 NTSAYFEFDSEL-----FLIDCGEGVFSNLYKLKLLERYKTIN-VLITHTHSDHVATLGH 74 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICM 152 L Y + K + F + + I +++ ND+ I Sbjct: 75 LLLYCFY-----------ELNKKVKVFFPEESLISSLLSSMGVEKDIYDLVKLNDIFIYK 123 Query: 153 KSAGGVIEAIPILQQH-GRISSLGFRFG----NVAYCTDVNAFPAESLEK-LQN-LDFLI 205 + + I I Q H I G+ Y D L+K L+ +DFL Sbjct: 124 E----KLTIISIEQAHVYEIPCFGYIIETGECRFFYSGDSKTINQLILDKFLKGEIDFLY 179 Query: 206 IDALKNGLHSSHFSLSESLKKIELINPKN---AILTHMHVDLDYDMVLK---STPSRVV 258 D + +H LS + + +LI P+ H+ + ++++ P ++ Sbjct: 180 QDTCSENFNGNHPHLSLA-ELSQLIPPEKRSYVFCIHLDIKFNFNLASSLGFRIPEQIQ 237 >gi|298373321|ref|ZP_06983310.1| VicX protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274373|gb|EFI15925.1| VicX protein [Bacteroidetes oral taxon 274 str. F0058] Length = 267 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 26/162 (16%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + L+E + +I + TH H DH+ L +K + +Y+ Sbjct: 28 ILIDAGINVRTVKKCLKEYGLGLENIYGIFITHAHTDHV-----KYAGVLAEKYNVPIYS 82 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +D+ P I++ K H Sbjct: 83 TKTVFEGINA---------NDKLLPKILSTNR---KIFNKTDKVTIKDFVVQSFPVSHDI 130 Query: 171 ISSLG----FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 ++G FR + TD+ E + + ++L+I+A Sbjct: 131 NDAMGYSISFRGKTMVIATDLGYISKEVADSIAKANYLVIEA 172 >gi|148254166|ref|YP_001238751.1| putative hydrolase [Bradyrhizobium sp. BTAi1] gi|146406339|gb|ABQ34845.1| putative hydrolase [Bradyrhizobium sp. BTAi1] Length = 280 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 33/215 (15%) Query: 56 VIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR-------GYFLKQKRPI 106 ++ D G + R + SI A TH H+DH+ G+ + + +K P+ Sbjct: 9 LLFDFGRGSTIRLFQKRVALGSITAHFITHLHSDHLVGLPDMWLSGWIGTPWA-SRKSPM 67 Query: 107 DVYAAPDCM---KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V+ + ++L ++F + +D + P + + P + G ++ Sbjct: 68 IVFGPKGTVAMTENLTKAFAEDIRIREDDEHLPPEGVAFVAKDIEPGPVYDKNG-VKVTA 126 Query: 164 ILQQHGR--ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI--IDALKNGLHS 215 I HG S G+ V D + + D L+ + ++ L Sbjct: 127 IEVNHGEKIKPSFGYVIEYDGKKVVLSGDTK-YDERVANAAKGADLLVHEVAVIEPELSK 185 Query: 216 S----------HFSLSESLKKIELINPKNAILTHM 240 S H S E+ K + PK A+ +H+ Sbjct: 186 SYPSYRDIEAHHSSPEEAGKIFSIAGPKLAVYSHI 220 >gi|189218658|ref|YP_001939299.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] gi|189185516|gb|ACD82701.1| Metal-dependent hydrolase of the beta-lactamase superfamily [Methylacidiphilum infernorum V4] Length = 246 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 28/165 (16%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ +++D G + ++ + V SI AV TH H DH+ G+ L +K P Sbjct: 5 PNSRILIDPGIRYKKIIRHLSAMNVPVESIKAVFITHEHTDHVAGLP-----ILLKKMPF 59 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y K L +S + ++ + IE Sbjct: 60 PLYCNTLTWKALKKSMG--------------LEDKAVDWRPFESGSRYLLDEIEIESFPI 105 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 H +GF F G + TD+ EK+ L+++ Sbjct: 106 PHDAADPVGFLFHHHRGTIGLLTDLGYVTKLVKEKITPCHTLLLE 150 >gi|325285090|ref|YP_004260880.1| Ribonuclease Z [Cellulophaga lytica DSM 7489] gi|324320544|gb|ADY28009.1| Ribonuclease Z [Cellulophaga lytica DSM 7489] Length = 301 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG C P+ +S + ++D G Sbjct: 1 MQLTVLG----------------CHAATPRTLANPTSQTLEIKGHL-----FLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ + ++ I + +H H DH G+ GL F R + VY K + E Sbjct: 40 QVQLRKSKLKFSRIKHIFISHLHGDHFFGLPGLVSTFRLLGREKELHVYGP----KGIKE 95 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + K D T P + + + + + + + IP+ RI + GF F Sbjct: 96 AITMLLKLGDSWTNYP-LYFHELTSKESTVVFEDDKVKVSTIPLNH---RIYTNGFLFQ 150 >gi|221632624|ref|YP_002521845.1| ribonuclease Z [Thermomicrobium roseum DSM 5159] gi|254808681|sp|B9KYQ3|RNZ_THERP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|221156663|gb|ACM05790.1| ribonuclease Z [Thermomicrobium roseum DSM 5159] Length = 303 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 43 KISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG--Y 98 +S + R V++D G + +DA+++TH HADH+ G+ G+ Sbjct: 19 WLSALLVRCEGHVVLLDCGEGTQISWRYTGWSFRDLDAIVFTHLHADHVAGLPGILYALA 78 Query: 99 FLKQKRPIDVYAAPDC------MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 F ++ P+ + ++ + + + + L+ + P + +P+ Sbjct: 79 FADRQEPVRIIGPVGTAQVVAALRSIVPTLPFPVETLELSGTSELELPGGLLLRALPVTH 138 Query: 153 KSAGGVIEA-----------------IPILQQH----GRISSLGF-------------RF 178 + IP+ H G R Sbjct: 139 RIPCFAYTLHRPRGRRFDPQRAQALGIPMTLWHRLQRGETVEFAGQLLTPDLVLGPPRRG 198 Query: 179 GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELIN 231 VA+ TD P + D L+ + L + H + E+ + + Sbjct: 199 ITVAFVTDTRPTPELPG-FVAGADLLVCEGMYGDTALLPRAIERGHMLMQEAAELARAAS 257 Query: 232 PKNAILTHMHVDL 244 + LTH L Sbjct: 258 VERLWLTHFSPSL 270 >gi|205375561|ref|ZP_03228349.1| YycJ [Bacillus coahuilensis m4-4] Length = 264 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +VD G + + + + +L TH H+DHI GI L +K + Sbjct: 22 GDQAFLVDAGLSGKAMNELFTKIDRDIAKLSGILVTHEHSDHIKGIG-----VLARKYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + ++ I + + G ++ Sbjct: 77 PIYANEKTWHAMSKN---------------IGEIATDQKFTFDMETVKTFGSLDIESFGV 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD ++N D + + L+ G + Sbjct: 122 SHDAAEPMFYVFHQGDKKLAVITDTGYVSDRMKGTIRNADAYVFESNHDVGMLQMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I K L H+ +D Sbjct: 182 STKRRILSDVGHVSNDDAALAMSDVIGDRTKRIYLAHLSLD 222 >gi|167749550|ref|ZP_02421677.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] gi|167657474|gb|EDS01604.1| hypothetical protein EUBSIR_00508 [Eubacterium siraeum DSM 15702] Length = 263 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 89/265 (33%), Gaps = 71/265 (26%) Query: 26 GACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-------LSIDA 78 C + S+ + S + V+VD G F LRE + ++ A Sbjct: 6 PVCSSSKGN------SVFV-----GDSTSGVLVDAGCSFK--ALREGLALCGIPFEAVKA 52 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 VL TH H DH + + ++ + VYA+ + L F I Sbjct: 53 VLVTHEHIDHTKALG-----QITKRTSVPVYASDGTARKL-------FSDKLVEQTAVIH 100 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--RFG--NVAYCTDVNAFPAES 194 I++ V + + H S+G+ +FG VA CTD+ E Sbjct: 101 PLSEIKSVPVDMDIDF---------FHTPHDAAESVGYTLKFGEHKVACCTDLGYVTDEV 151 Query: 195 LEKLQNLDFLIIDA----------------LKNGLHSSHFSLSE--SLKKIELI---NPK 233 + L D + I+A LK + H LS S + + + Sbjct: 152 RDNLLGSDTVYIEANYDPVLLKGNPKYPPYLKTRISGDHGHLSNGCSAEFCKELVAKGAS 211 Query: 234 NAILTHMHVD-----LDYDMVLKST 253 IL H+ + + Y+ V K+ Sbjct: 212 RLILGHLSQENNSPKMAYEAVEKTL 236 >gi|255023536|ref|ZP_05295522.1| metal-dependent beta-lactamase superfamily III protein [Listeria monocytogenes FSL J1-208] Length = 243 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|299822387|ref|ZP_07054273.1| metallo-beta-lactamase [Listeria grayi DSM 20601] gi|299815916|gb|EFI83154.1| metallo-beta-lactamase [Listeria grayi DSM 20601] Length = 264 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 76/247 (30%), Gaps = 42/247 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS I +++D G + Q +IDA + +H H DHI + + Sbjct: 42 SSYLIEE-----DGFQLLMDVGASAVSIMQNYTQPETIDAAIISHYHPDHIADVGILQHI 96 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R + +P + +Y +D Y + V E Sbjct: 97 RLLSKQTPKPEVLPIYGHQ-----------------EDEKYKLLAMEGVTEFRAYSGNEP 139 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA- 208 G + + H + FR + Y D +A+ + D LI D Sbjct: 140 IEIGPFKITFLKTIH-PVPCYAFRIEAGGKVLVYTAD-SAYQESFIPFADKADLLITDTN 197 Query: 209 -LKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLD----YDMVLKSTPSRVVPAF 261 ++ S H + +E + + ++ +L+H+ D ++ A Sbjct: 198 FFQDMAGKSKVHMASTEVGELAQKAGTRHLLLSHLPQVGDLSKLKAEAESKYSGKITIAT 257 Query: 262 DGMQFSS 268 G+ Sbjct: 258 KGLTIEI 264 >gi|182438791|ref|YP_001826510.1| ribonuclease Z [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779446|ref|ZP_08238711.1| Ribonuclease Z [Streptomyces cf. griseus XylebKG-1] gi|254808668|sp|B1VY42|RNZ_STRGG RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|178467307|dbj|BAG21827.1| putative sulphohydrolase/glycosulfatase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659779|gb|EGE44625.1| Ribonuclease Z [Streptomyces cf. griseus XylebKG-1] Length = 304 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 85/288 (29%), Gaps = 70/288 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q+LR V I + TH H DH G+ G+ + P V A P +H Sbjct: 39 GEGTQRQMLRAGVAAHDIHRICVTHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQH 98 Query: 118 LFESFRYCFKALDD-----------RTYPPIVNPIVIENNDVPICMKSAGGVIE------ 160 FE RY + +++ + ++S G + Sbjct: 99 FFERLRYATAYRETVELNQAPVAGAGGVLAATPAYTLDSAKLSHPVESYGYRLTEPDTRR 158 Query: 161 -AIPILQQH-------GRISSLGF-------------RFGNVAYCTDVNAFPAESLEKLQ 199 +L++H GR+ G R A+ D + Sbjct: 159 MLPALLREHGIAGPDVGRLQRDGVLGGVTLEQVSEERRGQRFAFVMDT-RLCDGVYALAE 217 Query: 200 NLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ K + H + ++ + ++ +LTH Sbjct: 218 GSDMLVIESTFLDEDEKLAVDHGHLTAGQAARVARESGVRHLVLTHFS 265 >gi|149721103|ref|XP_001499894.1| PREDICTED: similar to Zinc phosphodiesterase ELAC protein 1 (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29) [Equus caballus] Length = 363 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P +S + R + D G Sbjct: 2 SMDVTFLGTGAAYPSPTRG-----------------ASALVLRC----EGECWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSTVTKQPIEIYGPAGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ + + + +P +V+ +V + P Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCP 131 >gi|256017572|ref|ZP_05431437.1| ribonuclease Z [Shigella sp. D9] gi|293446609|ref|ZP_06663031.1| ribonuclease Z [Escherichia coli B088] gi|291323439|gb|EFE62867.1| ribonuclease Z [Escherichia coli B088] gi|315061564|gb|ADT75891.1| binuclear zinc phosphodiesterase [Escherichia coli W] gi|323944783|gb|EGB40849.1| ribonuclease BN [Escherichia coli H120] gi|332100934|gb|EGJ04280.1| ribonuclease Z [Shigella sp. D9] Length = 311 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + + A P+ + G+R Sbjct: 108 ETALR---ISGSWTDYP--LEIVEIGAGEI---LDDGLRKVTAYPLEHP---LECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|184154495|ref|YP_001842835.1| hypothetical protein LAF_0019 [Lactobacillus fermentum IFO 3956] gi|183225839|dbj|BAG26355.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|299782696|gb|ADJ40694.1| Putative uncharacterized protein [Lactobacillus fermentum CECT 5716] Length = 271 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 41/213 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G + M+ + + ++A+ TH H+DH HG+ L ++ + Sbjct: 29 AGHRILIDAGLSGKQLEQRMEAIGRSLDQVEALFVTHEHSDHSHGVG-----VLARRYGM 83 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + P ++ D+ + + Q Sbjct: 84 PVYANAGTWAAVEGKIGKIAPDQKQLLAPGKF----LDLGDLQVEAFAVSHDAAQPQFYQ 139 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 H S TD ++ ++N D +I+ L+ G +S Sbjct: 140 IHHDDQS-------FVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMGPYSWPLKQ 192 Query: 216 ------SHFSLSE-SLKKIELIN--PKNAILTH 239 H S E + +E+I K L H Sbjct: 193 RILGDTGHLSNEEGAGALMEVIGKRTKRVFLGH 225 >gi|187732862|ref|YP_001881094.1| ribonuclease Z [Shigella boydii CDC 3083-94] gi|254808664|sp|B2TW54|RNZ_SHIB3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|187429854|gb|ACD09128.1| ribonuclease Z [Shigella boydii CDC 3083-94] Length = 305 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---LDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|15827592|ref|NP_301855.1| hypothetical protein ML1173 [Mycobacterium leprae TN] gi|221230069|ref|YP_002503485.1| hypothetical protein MLBr_01173 [Mycobacterium leprae Br4923] gi|13093143|emb|CAC31554.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933176|emb|CAR71268.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 260 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 50/254 (19%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGC S + D A S + R + +++D G Sbjct: 2 TVRITVLGCSGS----VVGPDSPA-------------SGYLLRAPDTPP---LVLDFGGG 41 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-DV-----YAAPDCMKH 117 + R VL +H HADH + GL + ++ P V Y D Sbjct: 42 VLGALQRHADPGSVHVLLSHLHADHCLDMPGL--FVWRRYHPTRPVGKALLYGPDDTWLR 99 Query: 118 LFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L Y ++ + + G + +P L H S G Sbjct: 100 L---------GAASSPYGGEIDDCSDIFDVRHWVDGEPVPLGALMIMPRLVAHPT-ESYG 149 Query: 176 FRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKK 226 R + + Y D + + +E + D + +A + + H S +E+ + Sbjct: 150 LRITDPSGASLVYSGDTGSC-DQLVELARGADVFLCEASWTHSPDRPPNLHLSGTEAGRA 208 Query: 227 IELINPKNAILTHM 240 + + +LTH+ Sbjct: 209 AAQASVRELLLTHI 222 >gi|327264798|ref|XP_003217198.1| PREDICTED: LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2-like [Anolis carolinensis] Length = 781 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 103/302 (34%), Gaps = 68/302 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ P R SS I + ++++D G + Sbjct: 432 EVIFLGTGSAI----------------PMKIRNVSSTLI----NISATQSLLLDCGEGTF 471 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGL-----RGYFLKQKRPID--VYAA 111 Q+ R ID AV +H HADH G+ + R + + P + A Sbjct: 472 GQLCRHYGDEIDKVLCNIAAVFVSHIHADHHTGLLNILLQRHRAFMSLGQSPSPLLLVAP 531 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--------IEAIP 163 M L + +C + L P +IE DV A + Sbjct: 532 TQLMTWLHQYHDHCQEILGHINMIPAR--FLIEGCDVFKPKAKAFIASLLEKYDFAKFQT 589 Query: 164 ILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALK 210 L +H + + G++ Y D P E+L ++ +N LI D L+ Sbjct: 590 CLVRHCKNAFACSMVHKSGWKI---VYSGDT--MPCEALVEMGKNASLLIHEATLEDGLE 644 Query: 211 NGLH-SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV---LKSTPSRVVPAFDGMQF 266 + +H + S+++ +N + +L H Y + + +V AFD MQ Sbjct: 645 DEAIEKTHSTTSQAIGVGMKMNAEFIMLNHFSQR--YAKIPLFSEDFSEKVGIAFDHMQV 702 Query: 267 SS 268 Sbjct: 703 RF 704 >gi|162452603|ref|YP_001614970.1| hypothetical protein sce4327 [Sorangium cellulosum 'So ce 56'] gi|161163185|emb|CAN94490.1| conserved hypothetical secreted protein [Sorangium cellulosum 'So ce 56'] Length = 283 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 58/186 (31%), Gaps = 46/186 (24%) Query: 53 NTTVIVDTG--PDFYMQVLRE-------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 T V+VD G P Q L L DA++ TH HADH+ +K Sbjct: 21 GTRVLVDAGVGPRVLEQCLSAANAGGADGRLLPDAIVITHAHADHVG-----VAARYNKK 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +YA+ + L DR A G + P Sbjct: 76 HKIPIYASEATARA---------AELGDRE----------RVRAFSSREPFAVGALTFSP 116 Query: 164 ILQQHGRISS-----LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII----DA--LKNG 212 H G R A TD+ P LE + D +++ DA L+ G Sbjct: 117 TPLPHDAAQVALVVDDGAR--RAALVTDLGEVPPGLLEHVAGCDVVMLESNYDAGLLEAG 174 Query: 213 LHSSHF 218 + H Sbjct: 175 PYPQHL 180 >gi|197117966|ref|YP_002138393.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197087326|gb|ACH38597.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 252 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 66/194 (34%), Gaps = 20/194 (10%) Query: 75 SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 ID +L TH H DHI GI L + R + V + + L + D Sbjct: 45 RIDDILVTHSHLDHIRGIPLLADNIVVSRLSRTVQVRGTTEVLAAL-GTHLMNGVIWPDF 103 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 T P V+ +P+ A G E + H + ++G+R + Y D Sbjct: 104 TRIPTPEAPVLRYQPIPVDKSFAVGDYEVLASPVNH-PVPAVGYRVSRGGTSLLYTGDT- 161 Query: 189 AFPAESLEKLQNLDFLIIDALKN---------GLHSSHFSLSESLKKIELINPKNAILTH 239 E L LI++ H + L + L K+ + P ++TH Sbjct: 162 GPTERIWELAGELAALIVEVSFPSDMAEIALLTGHLTPMLLGKELAKLPKL-PPRILITH 220 Query: 240 MHVDLDYDMVLKST 253 + YD + Sbjct: 221 LKPQY-YDRIEAEL 233 >gi|46580110|ref|YP_010918.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449526|gb|AAS96177.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233894|gb|ADP86748.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris RCH1] Length = 415 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 31/177 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V ++++D G ++ I +AVL +HPH DH ID L Sbjct: 15 SCVQLSSGGRSILIDAGSPLRESQCEVKLSDISFEAVLVSHPHQDHYGLIDSLDPAT--- 71 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 VY K + A + PP+ N + G Sbjct: 72 ----PVYIGEIACKMIA-------AARTFTSRPPLANNF----RHFKAWTQFEIGPFRIT 116 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDV--NAFPAESLEKL-----QNLDFLIIDA 208 P L H + GF + Y D + ++ + L Q +D L+++ Sbjct: 117 PYLMDHSSTDAFGFLVEAEGKRLFYSGDFRAHGSKEKTFDALLARPPQKVDVLLMEG 173 >gi|296876215|ref|ZP_06900269.1| ribonuclease Z [Streptococcus parasanguinis ATCC 15912] gi|296432926|gb|EFH18719.1| ribonuclease Z [Streptococcus parasanguinis ATCC 15912] Length = 309 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNQILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPVGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + + + +++ + A + I + Sbjct: 103 MTSLR---------VSGSRLPYRIHFHEFDEHSLGKILETDKFTVYAEALDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRI 154 >gi|167999045|ref|XP_001752228.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696623|gb|EDQ82961.1| predicted protein [Physcomitrella patens subsp. patens] Length = 305 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 89/307 (28%), Gaps = 78/307 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G P R S++ + ++++D G Q+ Sbjct: 1 FLGTG----------------SAEPSKFRGSSAILLQTEG----KHSMLLDAGEGSIGQL 40 Query: 69 LR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 R E + S+ V +H HADH+ G+ + + + + + + + E Sbjct: 41 RRKFGSAGVDEVLRSLQCVWLSHKHADHVLGMLSIIHAYPTEAPKLTIIGPSAVKRWISE 100 Query: 121 SF-------------RYCFKAL---------DDRTYPPIVNPIV--IENNDVPICMKSAG 156 F Y F+ + P N + E + A Sbjct: 101 VFFCDSQAVSLWADMGYNFRPFQFLHCNAFSEGIFSRPAGNGALGNAEQDTQGFLKNLAL 160 Query: 157 GVIEAIPILQQH--GRISSLGFRFGNVAYCTDVNA--------------FPAESLEKLQN 200 + +I + H + G ++ Y D + E Sbjct: 161 LGLRSIYVDHCHEAYGLVIHGHSGWSIVYSGDTRPCHRLIQAGGGCSLLIHEATFE---- 216 Query: 201 LDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD-MVLKSTPSRVVP 259 D L A++ H ++ E++ + + +LTH + S V Sbjct: 217 -DNLSDHAIRKR----HSTVLEAIDVGLQMRAQFVVLTHFSQRYPQAVTLDASRYKNVCT 271 Query: 260 AFDGMQF 266 AFDGM Sbjct: 272 AFDGMVV 278 >gi|296329972|ref|ZP_06872456.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676697|ref|YP_003868369.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153011|gb|EFG93876.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414941|gb|ADM40060.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 264 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R ++ +D + TH H+DHI G+ + +K Sbjct: 22 EDHAFLVDAGLSGKAMDGLMAQIGR-KMDDVDGIFVTHEHSDHIKGLG-----VVARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +YA K + I + P+ + G ++ Sbjct: 76 LPIYANEKTWKAMEN---------------QIGKIDTDQKFVFPMETVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANVFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|255280289|ref|ZP_05344844.1| metal-dependent hydrolase of the metallobeta-lactamase family protein [Bryantella formatexigens DSM 14469] gi|255269380|gb|EET62585.1| metal-dependent hydrolase of the metallobeta-lactamase family protein [Bryantella formatexigens DSM 14469] Length = 231 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 50/201 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 LGCG++ P + +S ++ V++D G Sbjct: 3 RIRFLGCGSAFN-PLLG----------------NTSAYFIM-----EDSLVLIDAGETVF 40 Query: 64 --FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFE 120 Y L E I ++ TH H+DH+ + + Y + ++++ + L + Sbjct: 41 SKLYKMKLLESCPEI-FIIITHTHSDHVGSLPSIISYTYYVLGKRVNIFYPEKSLAVLLD 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG 179 IV E + + G + + +H I G+ Sbjct: 100 MMG-----------------IVREAYVLSVDRDFCIGSVAVHALSVKHEENIGCYGYLLE 142 Query: 180 ----NVAYCTDVNAFPAESLE 196 + Y D P ++ Sbjct: 143 FPDAKIYYSGDSYEIPDRVIK 163 >gi|29832119|ref|NP_826753.1| ribonuclease Z [Streptomyces avermitilis MA-4680] gi|41017545|sp|Q82BX8|RNZ_STRAW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29609237|dbj|BAC73288.1| putative hydrolase [Streptomyces avermitilis MA-4680] Length = 301 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 91/332 (27%), Gaps = 97/332 (29%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV---------- 108 G Q+LR V + + TH H DH G+ G+ + Sbjct: 39 GEGTQRQMLRAGVAAHDLHRICVTHFHGDHSLGLAGV--IQRINLDRVPHEITAHYPGSG 96 Query: 109 --------YA-----------------------APDCMK-----HLFESFRYCFKALDDR 132 YA ++ H ESF Y D R Sbjct: 97 QRFFERLRYATAYRETVALTEAPVAADGVIADTPAYVLETRRLSHPVESFGYRLVEPDGR 156 Query: 133 T-YPPIVNPIVIENNDV-PICMKSAGGVIEAIPI-LQQHGRISSLGFRFGNVAYCTDVNA 189 P + I+ DV I + A G + + +HG A+ D Sbjct: 157 RMLPERLAAHGIKGPDVGRIQREGAIGGVSLEDVSEVRHG---------QRFAFVMDT-R 206 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 + D L+I++ + H + ++ + + ++ +LTH Sbjct: 207 LCEGVHALAEGCDMLVIESTFLDGDHQLAEDHGHLTAGQAGRVAKDAGVRHLVLTHFSQR 266 Query: 244 L-DYDMVLKSTPSR-----VVPAFDGMQFSSP 269 D D + + + A D ++ P Sbjct: 267 YSDPDAFEREARAGGFEGELTVAHDLLRVPVP 298 >gi|187775772|ref|ZP_02798010.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4196] gi|188024686|ref|ZP_02773142.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4113] gi|189010153|ref|ZP_02805133.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4076] gi|189402100|ref|ZP_02780030.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4401] gi|189403064|ref|ZP_02792904.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4486] gi|189403973|ref|ZP_02786297.2| ribonuclease Z [Escherichia coli O157:H7 str. EC4501] gi|189404940|ref|ZP_02812186.2| ribonuclease Z [Escherichia coli O157:H7 str. EC869] gi|208807104|ref|ZP_03249441.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4206] gi|208813769|ref|ZP_03255098.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4045] gi|208820905|ref|ZP_03261225.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4042] gi|209398284|ref|YP_002271681.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4115] gi|217327312|ref|ZP_03443395.1| ribonuclease Z [Escherichia coli O157:H7 str. TW14588] gi|261223275|ref|ZP_05937556.1| ribonuclease Z [Escherichia coli O157:H7 str. FRIK2000] gi|261259175|ref|ZP_05951708.1| ribonuclease Z [Escherichia coli O157:H7 str. FRIK966] gi|12516619|gb|AAG57401.1|AE005459_4 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13362626|dbj|BAB36579.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187771348|gb|EDU35192.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4196] gi|188017272|gb|EDU55394.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4113] gi|189001979|gb|EDU70965.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4076] gi|189357705|gb|EDU76124.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4401] gi|189362942|gb|EDU81361.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4486] gi|189368351|gb|EDU86767.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4501] gi|189372855|gb|EDU91271.1| ribonuclease Z [Escherichia coli O157:H7 str. EC869] gi|208726905|gb|EDZ76506.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4206] gi|208735046|gb|EDZ83733.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4045] gi|208741028|gb|EDZ88710.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4042] gi|209159684|gb|ACI37117.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4115] gi|209765220|gb|ACI80922.1| hypothetical protein ECs3156 [Escherichia coli] gi|209765222|gb|ACI80923.1| hypothetical protein ECs3156 [Escherichia coli] gi|209765226|gb|ACI80925.1| hypothetical protein ECs3156 [Escherichia coli] gi|217319679|gb|EEC28104.1| ribonuclease Z [Escherichia coli O157:H7 str. TW14588] gi|320192108|gb|EFW66753.1| Ribonuclease Z [Escherichia coli O157:H7 str. EC1212] gi|326339622|gb|EGD63433.1| Ribonuclease Z [Escherichia coli O157:H7 str. 1125] gi|326344084|gb|EGD67845.1| Ribonuclease Z [Escherichia coli O157:H7 str. 1044] Length = 311 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 108 ETALR---ISGSWTDYP-------LEIVEIGAGEILDDGLRKVTAYPMEH-PLECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|302560718|ref|ZP_07313060.1| ribonuclease Z [Streptomyces griseoflavus Tu4000] gi|302478336|gb|EFL41429.1| ribonuclease Z [Streptomyces griseoflavus Tu4000] Length = 301 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 88/328 (26%), Gaps = 89/328 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR ++ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGAAAHDLNRICVTHFHGDHSLGLAGVIQRINLDKVPHEITAHYPRSGQR 98 Query: 93 --DGLRGYFLKQK---------------RPIDVY-AAPDCMKHLFESFRYCFKALDDRTY 134 D LR ++ Y + H E+F Y D R Sbjct: 99 FFDRLRYATAYRETVALTEAPVDTDGPLHRTPGYTLEARRLSHPVEAFGYRLVEPDGRRM 158 Query: 135 PP-IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE 193 P + I+ D+ + G ++ +P+ + + R A+ D Sbjct: 159 LPDRLAAHGIKGPDIGRIQRE--GTLDGVPLE-EVSEVR----RGQRFAFVMDT-RLCDG 210 Query: 194 SLEKLQNLDFLIIDALKNGLHS------SHFSLSESLKKIELINPKNAILTHMHV----- 242 + D L+I++ H + ++ + ++ +LTH Sbjct: 211 VYALAEGCDMLVIESTFLDEDEELAVEFGHLTAGQAARVARDAGVRHLVLTHFSQRYTDP 270 Query: 243 -DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 + + + A D ++ P Sbjct: 271 EEFERQARAAGYEGELTVAHDLLRVPLP 298 >gi|157158471|ref|YP_001463616.1| ribonuclease Z [Escherichia coli E24377A] gi|218554828|ref|YP_002387741.1| ribonuclease Z [Escherichia coli IAI1] gi|218695871|ref|YP_002403538.1| ribonuclease Z [Escherichia coli 55989] gi|300926372|ref|ZP_07142172.1| ribonuclease Z [Escherichia coli MS 182-1] gi|301328757|ref|ZP_07221810.1| ribonuclease Z [Escherichia coli MS 78-1] gi|307311168|ref|ZP_07590812.1| ribonuclease BN [Escherichia coli W] gi|166991099|sp|A7ZP87|RNZ_ECO24 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808631|sp|B7LAT4|RNZ_ECO55 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808634|sp|B7M5V1|RNZ_ECO8A RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157080501|gb|ABV20209.1| ribonuclease Z [Escherichia coli E24377A] gi|218352603|emb|CAU98384.1| binuclear zinc phosphodiesterase [Escherichia coli 55989] gi|218361596|emb|CAQ99188.1| binuclear zinc phosphodiesterase [Escherichia coli IAI1] gi|300417649|gb|EFK00960.1| ribonuclease Z [Escherichia coli MS 182-1] gi|300844905|gb|EFK72665.1| ribonuclease Z [Escherichia coli MS 78-1] gi|306908674|gb|EFN39171.1| ribonuclease BN [Escherichia coli W] gi|323377855|gb|ADX50123.1| ribonuclease BN [Escherichia coli KO11] Length = 305 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---LDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|258516736|ref|YP_003192958.1| beta-lactamase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257780441|gb|ACV64335.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 253 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 49/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC A PR G S + + +++D G Sbjct: 1 MQLTVLGCWAPY--PRAGGAC-------------------SGYLLQDGDINIMLDIGHGS 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADH---IHGIDGLRGYFLK---QKRPIDVYAAPDCMKH 117 ++++ S+ A++ TH H DH ++ + ++ ++ P+ + + + Sbjct: 40 LSRLMQVLDFRSLTALVITHFHPDHYSDVYALRHAVAGAIRDKSRQGPLTLLMPSEPAAN 99 Query: 118 LFESFRY--CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 E Y F + P ++ + G + +P + + Sbjct: 100 FTEISGYGDAFAVKAIDSLSP-------DSYSGTGNWQLGGLKLRFMPTVH---KKPCYA 149 Query: 176 FRFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKI 227 R Y D A+ +E ++ + D L+ +A SH + ++ + Sbjct: 150 VRIEGLTQFVYTGDT-AYSSELVDFFRGADLLLSEASGFDSDTSILSGSHMTARQAGELG 208 Query: 228 ELINPKNAILTH 239 L K ++TH Sbjct: 209 RLAGAKKLMITH 220 >gi|281420604|ref|ZP_06251603.1| putative metallo-beta-lactamase domain protein [Prevotella copri DSM 18205] gi|281405377|gb|EFB36057.1| putative metallo-beta-lactamase domain protein [Prevotella copri DSM 18205] Length = 274 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 64/265 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 T+LG G + V +I + +T ++VD G Sbjct: 7 QITMLGTGNAT-VSQIYNTC---------------------FLLKTPSTLMLVDAGGGNG 44 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-------KRPIDVYAAPDC 114 Q+ + + I + TH H DH+ G+ + ++ + + VY Sbjct: 45 ILAQLKKVNVQISDIHHLFVTHAHTDHVLGV----IWVIRMVAQCKGYEGLLHVYGNDKV 100 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 MK + V +E+ + G ++ Q + Sbjct: 101 MKVIKTIIDMILAKKQLAKVAERVVFHQLEDGEC-----FEVGDMKLECFDIQSTKEKQF 155 Query: 175 GFRFGNVAYCTDVNAFP------------AESLEKLQNLDFLIIDAL-------KNGLHS 215 GFR +D + P ++ + D+++ +A + Sbjct: 156 GFRAE--LPSSDESGKPLVLACLGDEPYNEQNRRYIVGADWMMCEAFCLYADRDTFKPYE 213 Query: 216 S-HFSLSESLKKIELINPKNAILTH 239 H + ++ K E + KN IL H Sbjct: 214 KCHSTALDAGKLAEELGVKNLILYH 238 >gi|13324644|gb|AAK18826.1|AF327739_3 YycJ-like protein [Streptococcus thermophilus] Length = 243 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 33/179 (18%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + + +DA+L TH H DHIHG+ L +K + Sbjct: 32 PEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVG-----VLARKYGM 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + +S K + + + G I+ Sbjct: 87 DIYANEKTW-QIMDSKNMLGKVDNSQK------------HIFSRGKLLTFGDIDIESFGV 133 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS 215 H I +RF + TD ++N D +LI I+ L+ G + Sbjct: 134 SHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRAGSYP 192 >gi|291568530|dbj|BAI90802.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 278 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 88/264 (33%), Gaps = 55/264 (20%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V R N I D G + L +Q+ +V ++H H DHI G +F+ Sbjct: 29 SCVEMRLGNQRFIFDGGTGLRVLGLDLLKQMPVEASVFFSHTHWDHIQGF----PFFVPA 84 Query: 103 KRPI---DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 PI +Y A + E D +P P+ + +D+ G V Sbjct: 85 FIPINRFHIYGAIAPDGSTIKERLS------DQMVHPNFPVPMHVMQSDLKFYDLIPGDV 138 Query: 159 IE------AIPILQQHGRISSLGFRF---GNVA-YCTDV----NAFPAESLEKLQNLDFL 204 I H + ++G+R G A YC+D + F L ++ D L Sbjct: 139 ITLSDGIKIETAPLNHPNM-AVGYRVTWEGRTAVYCSDTEHFLDRFDNNVLHLARDADLL 197 Query: 205 IIDA--LKNGLHS--------SHFSLSESLKKIELINPKNAILTHMH-VDLDYD------ 247 I DA H H + ++ + K M+ D +D Sbjct: 198 IYDATYTNEEYHDHKCPKIGWGHSTWQVGVEIAKKAGVKQ---IAMYQHDPSHDDDFLDR 254 Query: 248 ---MVLKSTPSRVVPAFDGMQFSS 268 + + P V A +GM + Sbjct: 255 VQLELKAAFPHGV-VAREGMVITL 277 >gi|291283514|ref|YP_003500332.1| ribonuclease Z [Escherichia coli O55:H7 str. CB9615] gi|331653711|ref|ZP_08354712.1| ribonuclease Z [Escherichia coli M718] gi|209765218|gb|ACI80921.1| hypothetical protein ECs3156 [Escherichia coli] gi|209765224|gb|ACI80924.1| hypothetical protein ECs3156 [Escherichia coli] gi|290763387|gb|ADD57348.1| ribonuclease Z [Escherichia coli O55:H7 str. CB9615] gi|320641098|gb|EFX10577.1| ribonuclease Z [Escherichia coli O157:H7 str. G5101] gi|320646486|gb|EFX15405.1| ribonuclease Z [Escherichia coli O157:H- str. 493-89] gi|320651583|gb|EFX19963.1| ribonuclease Z [Escherichia coli O157:H- str. H 2687] gi|320657335|gb|EFX25137.1| ribonuclease Z [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663037|gb|EFX30354.1| ribonuclease Z [Escherichia coli O55:H7 str. USDA 5905] gi|320667854|gb|EFX34762.1| ribonuclease Z [Escherichia coli O157:H7 str. LSU-61] gi|331048560|gb|EGI20636.1| ribonuclease Z [Escherichia coli M718] Length = 311 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 107 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 108 ETALR---ISGSWTDYP-------LEIVEIGAGEILDDGLRKVTAYPMEH-PLECYGYRI 156 Query: 179 G 179 Sbjct: 157 E 157 >gi|269925657|ref|YP_003322280.1| Ribonuclease Z [Thermobaculum terrenum ATCC BAA-798] gi|269789317|gb|ACZ41458.1| Ribonuclease Z [Thermobaculum terrenum ATCC BAA-798] Length = 307 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 92/330 (27%), Gaps = 94/330 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG S +P R SS I R ++D G Sbjct: 2 LDVTLLGT--SGTLPLPG--------------RYLSSALI-----RIGGKLFLIDCGEGT 40 Query: 65 YMQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKH 117 LR + ID++L TH HADH+ G+ GL +R P+ ++ P + Sbjct: 41 -QVALRAKGWGIRRIDSILLTHSHADHVLGLPGLLLTLAFSQRGAEEPLRIFGPPSVLPV 99 Query: 118 LFE------SFRY--------------------CFKALDDRTYP-----------PIVNP 140 L Y F + P P + Sbjct: 100 LESIRVFAPRLPYPVYFIPLEVGDEVDVTDNLKLFAGPTEHDVPCLSYSLYVPRSPKFDV 159 Query: 141 IVIENNDVPICMKS--------AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 + VP + G E P L + + TD F Sbjct: 160 ERANSLGVPRDLWGRLQRGESVFVGEREIQPQDVLGPPRKGL-----KLVFITDT-RFTE 213 Query: 193 ESL---EKLQNLDFLIIDALKNGLH-------SSHFSLSESLKKIELINPKNAILTHMHV 242 + + K+Q D LI + + H + +E+ K + LTH Sbjct: 214 DLVSFASKIQPPDLLISEGMYGDESMRPKDWDVPHMTFAEAAKVASASGARLLWLTHYSP 273 Query: 243 DL----DYDMVLKSTPSRVVPAFDGMQFSS 268 + Y + + A DG + S Sbjct: 274 MMADPSRYIENARRIFPNAIAAQDGTEISL 303 >gi|255026611|ref|ZP_05298597.1| hypothetical protein LmonocytFSL_10240 [Listeria monocytogenes FSL J2-003] Length = 243 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 36/213 (16%) Query: 56 VIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRP--IDVY 109 +++D G + IDA + +H H DH+ + +R K+++P + +Y Sbjct: 31 LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHIRLLSQKKEKPPVLPIY 90 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + D+R Y + V + + + G + + H Sbjct: 91 GHKE----------------DERGYSYLEMVNVTKAIEYKADDRLEIGPFKVTFLKTIH- 133 Query: 170 RISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------SSHFS 219 + R Y D +A+ + + D L+ D N H H + Sbjct: 134 PVPCYAMRIEAGDKVFVYTAD-SAYQDSFIPFSEGADLLVTDT--NFFHDLAGKTKVHMA 190 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +E K N K+ +L+H+ D +++ + Sbjct: 191 STEVAKIAREANVKSLLLSHLPEVGDLEVLKQE 223 >gi|227514137|ref|ZP_03944186.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931] gi|227087508|gb|EEI22820.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus fermentum ATCC 14931] Length = 271 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 41/213 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G + M+ + + ++A+ TH H+DH HG+ L ++ + Sbjct: 29 AGHRILIDAGLSGKQLEQRMEAIGRSLDQVEALFVTHEHSDHSHGVG-----VLARRYGM 83 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + P ++ D+ + + Q Sbjct: 84 PVYANAGTWAAVEGKIGKIAPDQKQLLAPGKF----LDLGDLQVEAFAVSHDAAQPQFYQ 139 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 H S TD ++ ++N D +I+ L+ G +S Sbjct: 140 IHHDDQS-------FVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMGPYSWPLKQ 192 Query: 216 ------SHFSLSE-SLKKIELIN--PKNAILTH 239 H S E + +E+I K L H Sbjct: 193 RILGDTGHLSNEEGAGALMEVIGERTKRVFLGH 225 >gi|170739206|ref|YP_001767861.1| putative phytochrome sensor protein [Methylobacterium sp. 4-46] gi|168193480|gb|ACA15427.1| putative phytochrome sensor protein [Methylobacterium sp. 4-46] Length = 603 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 74/227 (32%), Gaps = 38/227 (16%) Query: 53 NTTVIVDTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T VI+D G Y Q L + VL TH H DHI G+ +F D+Y Sbjct: 36 GTLVILDMGTGAYALGQELAAAGRPLRGHVLITHTHWDHIQGVPFFAPFFAPGNEW-DIY 94 Query: 110 AAPDCMKHLFES----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 A L E+ +Y + + + + ++ + G + Sbjct: 95 APRGLGASLRETLSGQMQYSYFPVSLEQLGATIRYHELVEGELSL---GEGDDVAVETHY 151 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAF---------PAESL-----EKLQNLDFLIID 207 H + +LG+R + Y D F P E L E L+ D +I D Sbjct: 152 LNHPAL-TLGYRLTADGATLVYALDHEPFCTAAADGTAPPEGLDRRHAEFLRGADLVIHD 210 Query: 208 A------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 A + L H ++ + + L MH D D Sbjct: 211 AQYTAAEYQAKLGWGHSTVEYARRVAREAGAARLAL--MHHDPQRDD 255 >gi|312891455|ref|ZP_07750972.1| RNAse Z [Mucilaginibacter paludis DSM 18603] gi|311296149|gb|EFQ73301.1| RNAse Z [Mucilaginibacter paludis DSM 18603] Length = 305 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 33/179 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG ++ P R ++ ++ + ++D G Sbjct: 2 RFDVTILGSSSAT--PIYN--------------RNPTAQALNI-----NERFYLIDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 Q+LR + ID + +H H DH G+ GL R PI ++ + Sbjct: 41 TQQQMLRYDIKSSRIDYIFISHLHGDHYLGLVGLLSSLNLNGRKKPITLFGPAHLKDIIQ 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F Y + T + + + I + + I IL H RI+ GF F Sbjct: 101 MHFEY-----SETTIQFDLEFRATDPSKSEIILDNQ--DITVETILLDH-RIACTGFLF 151 >gi|294666548|ref|ZP_06731789.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603692|gb|EFF47102.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 249 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGRLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|260662556|ref|ZP_05863451.1| hydrolase [Lactobacillus fermentum 28-3-CHN] gi|260553247|gb|EEX26190.1| hydrolase [Lactobacillus fermentum 28-3-CHN] Length = 270 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 41/213 (19%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G + M+ + + ++A+ TH H+DH HG+ L ++ + Sbjct: 28 AGHRILIDAGLSGKQLEQRMEAIGRSLDQVEALFVTHEHSDHSHGVG-----VLARRYGM 82 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + P ++ D+ + + Q Sbjct: 83 PVYANAGTWAAVEGKIGKIAPDQKQLLAPGKF----LDLGDLQVEAFAVSHDAAQPQFYQ 138 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 H S TD ++ ++N D +I+ L+ G +S Sbjct: 139 IHHDDQS-------FVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMGPYSWPLKQ 191 Query: 216 ------SHFSLSE-SLKKIELIN--PKNAILTH 239 H S E + +E+I K L H Sbjct: 192 RILGDTGHLSNEEGAGALMEVIGERTKRVFLGH 224 >gi|256822842|ref|YP_003146805.1| beta-lactamase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796381|gb|ACV27037.1| beta-lactamase domain protein [Kangiella koreensis DSM 16069] Length = 269 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 79/215 (36%), Gaps = 53/215 (24%) Query: 56 VIVDTG---PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V+VD G + ++ R + ID +L TH H DHI G+ L ++ I V++ Sbjct: 30 VMVDCGFTVKEVLKRLPRLNIEPDQIDGILVTHEHQDHISGVGALS-----RRFSIPVWS 84 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 +L + +IE + G ++ P+ H Sbjct: 85 TR--------------GSLLSGKCGNLPELNLIEG-----FQPFSIGSLDVTPLSVPHDA 125 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 F F +A TD+ F + +E+L ++++ L NG + Sbjct: 126 REPCQFLFTQDELRLAILTDLGCFTPKIVEQLTPCHGILLECNHDEEMLWNGSYPERLKQ 185 Query: 216 ------SHFSLSESLKKIELI---NPKNAILTHMH 241 H S ++++ ++L+ + + I TH+ Sbjct: 186 RVAGRMGHMSNRQAIELLQLMDRDSLQLVIATHLS 220 >gi|150401156|ref|YP_001324922.1| ribonuclease Z [Methanococcus aeolicus Nankai-3] gi|166991483|sp|A6UUY8|RNZ_META3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|150013859|gb|ABR56310.1| ribonuclease Z [Methanococcus aeolicus Nankai-3] Length = 322 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 89/305 (29%), Gaps = 93/305 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA++ P R SS+ I E + D G Sbjct: 1 MKIIFLGTGAAI----------------PTKHRNHSSVGIKYDGE-----VFLFDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q++ + I+ + +H H DHI G+ GL R PI++Y P+ + Sbjct: 40 QRQMIYTDISPMKINNIFISHLHGDHILGLAGLLQSIGFNGRTEPINIYGPPEIKNTIEN 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + + +++ + + I + + S + A P+ I + Sbjct: 100 ILKIGYHSINFK-----ITVHEINSKKPMKIIDSEKYMAYAYPVNH---SIPCYAYILKE 151 Query: 179 -----------------------------------GNVAYCTDVNAFPAESL-------- 195 G + Y DV P +S+ Sbjct: 152 KKKPQLNLKKAMELGVEVGPDLKSLKDGNEVKLKNGKIIYPNDVLLPPKDSMCVAYSGDT 211 Query: 196 -------EKLQ--NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHM 240 E L LI +A + H ++ +++ ++ ILTH+ Sbjct: 212 MPIEDFGEFLNSIGCTVLIHEATFGSSKKNNAVETMHSTIEDAVNIGKIACVDTVILTHI 271 Query: 241 HVDLD 245 D Sbjct: 272 SARYD 276 >gi|281414157|ref|ZP_06245899.1| metal-dependent hydrolase, beta-lactamase superfamily III [Micrococcus luteus NCTC 2665] Length = 271 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIH---GIDGLRGYFL--KQKRPIDV 108 +++D G + R + +D +L +H H DH G+ + + + V Sbjct: 40 RILLDLGNGALGVLQRYVDLEDLDGILLSHLHPDHFMDLCGMHVAIRWNPAGWGRGRLPV 99 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-----GVIEAIP 163 Y + E++ ++P + D +AG G P Sbjct: 100 YGPAGTGDRIAEAYG--------------MDPEPGMHQDFEFRCWAAGRTERLGPFRFTP 145 Query: 164 ILQQHGRISSLGFRFGN-------------VAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 + +H + R + Y D +A +E ++ D + +A Sbjct: 146 VPVRHPIDEAYAIRVEVDRVDDDGDVTTRVLTYSGDTDAC-EGLVEAARDADVFLCEAAF 204 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +G+ H + + + + +LTH+ Sbjct: 205 HEGRDDGIDGVHLTGRRAGETAAQAGARKLLLTHL 239 >gi|322389855|ref|ZP_08063396.1| ribonuclease Z [Streptococcus parasanguinis ATCC 903] gi|321143436|gb|EFX38873.1| ribonuclease Z [Streptococcus parasanguinis ATCC 903] Length = 309 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEAA 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNQILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPVGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + + + +++ + A + I + Sbjct: 103 MTSLR---------VSGSRLPYRIHFHEFDEHSLGKILETDKFTVYAEALDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRI 154 >gi|310821664|ref|YP_003954022.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|309394736|gb|ADO72195.1| Metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 279 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 23/172 (13%) Query: 53 NTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +I D G ++RE + ++H H DH+ G +L + +Y Sbjct: 32 GHRLIFDAGTGIRALGELLMRESAPQKATLFFSHLHWDHVQGFPFFTPAYLGTTE-LSLY 90 Query: 110 AA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 L + + P + + G P+ Sbjct: 91 GPGANGAQALQSVLVQQM-----EPPNFPVPLSIMRSRMTFGSALHGTPVEVGPFRVTPV 145 Query: 165 LQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDA 208 H + L +R Y TDV ++ + L+ D L++DA Sbjct: 146 DVPHPQ-GCLAYRVEADGHTFVYATDVELARDSLTRDVGRYLEGADALVLDA 196 >gi|161367564|ref|NP_288846.2| ribonuclease Z [Escherichia coli O157:H7 EDL933] gi|162139773|ref|NP_311183.2| ribonuclease Z [Escherichia coli O157:H7 str. Sakai] gi|168798441|ref|ZP_02823448.1| ribonuclease Z [Escherichia coli O157:H7 str. EC508] gi|195935648|ref|ZP_03081030.1| ribonuclease Z [Escherichia coli O157:H7 str. EC4024] gi|254794164|ref|YP_003079001.1| ribonuclease Z [Escherichia coli O157:H7 str. TW14359] gi|41017568|sp|Q8XCZ0|RNZ_ECO57 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|189378925|gb|EDU97341.1| ribonuclease Z [Escherichia coli O157:H7 str. EC508] gi|254593564|gb|ACT72925.1| RNase BN [Escherichia coli O157:H7 str. TW14359] Length = 305 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 102 ETALR---ISGSWTDYP-------LEIVEIGAGEILDDGLRKVTAYPMEH-PLECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|315281626|ref|ZP_07870215.1| metal-dependent beta-lactamase superfamily III protein [Listeria marthii FSL S4-120] gi|313614731|gb|EFR88286.1| metal-dependent beta-lactamase superfamily III protein [Listeria marthii FSL S4-120] Length = 243 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 77/229 (33%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DKRGYSFLEMAGVTKAIEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTVH-PVPCYAMRIEAGGKVFVYTAD-SAYQDSFIPFAEGADLLVSDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|210621326|ref|ZP_03292588.1| hypothetical protein CLOHIR_00531 [Clostridium hiranonis DSM 13275] gi|210154809|gb|EEA85815.1| hypothetical protein CLOHIR_00531 [Clostridium hiranonis DSM 13275] Length = 404 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 30/219 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++D G + + + V I ++ TH HADH G+D + + Sbjct: 94 DDGGVAMLIDAGDNDDERAVVNYLNGRGVKDIKYLVSTHAHADHAGGLDEVVKKCKVENA 153 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EA 161 + + D + F P+ N + GG E+ Sbjct: 154 FV---SNGDADTRTYRDFIMALSDKGLNPTVPLEGKKFKLKNSYFEVFNTNGGSTTNNES 210 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSL 220 + +L HG+ + + D E L K+ ++D L K G H SH S Sbjct: 211 LVVLLTHGK--------DKMLFTGDAEEEVEYEILNKMPDVDLL-----KVGHHGSHSST 257 Query: 221 SESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPSR 256 +++ ++ P+ A++ + + ++ R Sbjct: 258 TDA--FLDKTKPEYAVILCGRNNKYGHPHRETMRKLKDR 294 >gi|168186572|ref|ZP_02621207.1| ribonuclease Z [Clostridium botulinum C str. Eklund] gi|169295405|gb|EDS77538.1| ribonuclease Z [Clostridium botulinum C str. Eklund] Length = 311 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 86/303 (28%), Gaps = 93/303 (30%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G G P N R S I ++VD G + + Sbjct: 6 FLGTG--GGAP---------------NSRRNLSSVI----LNFKGRKILVDCGEGTQLSM 44 Query: 69 --LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPD---CMKHLFES 121 + ID + +H H DHI G G+ R P+ + D +K L Sbjct: 45 KIAKTGFKDIDIICISHCHGDHIIGFPGILSTIGNSGRTYPLTIIGPRDIIRVVKGLTVI 104 Query: 122 FRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 Y L+ P ++ +I+ N + G I + H I + + F Sbjct: 105 TPYLPYELNIIENPVAQLSFNIIKEN----LKLESDGEILINTLEVNHS-IPCIAYNFII 159 Query: 179 ---------------------------------GNV----------------AYCTDVNA 189 G + ++ TD Sbjct: 160 KRKAKFNSEKAVRDNIPKKLWSILQKGQYVNYEGKLYSPNMVLGEEREGIKISFVTDTTP 219 Query: 190 FPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + ++ D LI D + + + H + S++ + K ILTH V Sbjct: 220 I-DSLIPFIEGSDMLICEGTYGKDDDIDKAIKNKHMTFSQAATLAYRGHVKELILTHFGV 278 Query: 243 DLD 245 ++ Sbjct: 279 AME 281 >gi|300931381|ref|ZP_07146710.1| ribonuclease Z [Escherichia coli MS 187-1] gi|300460751|gb|EFK24244.1| ribonuclease Z [Escherichia coli MS 187-1] Length = 305 Score = 57.1 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 102 ETALR---ISGSWTDYP-------LEIVEIGAGEILDDGLRKVTAYPMEH-PLECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|327538164|gb|EGF24848.1| beta-lactamase domain protein [Rhodopirellula baltica WH47] Length = 256 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 36/237 (15%) Query: 56 VIVDTGPD-FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPD 113 V++D G F + L E +D +L +H H DH+ G+ L ++ + + V+ + Sbjct: 32 VLLDAGTGIFRLPKLIE-TDHLD-ILLSHAHLDHVVGLTFLLDILHQRPVKDVRVWGQRE 89 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + E + F + P+ P+ D G + P G + Sbjct: 90 KLAAIRE---HLFHE----SLFPVAIPVTWHAIDDQSTCDLHGTEMSWRPQEHPGGSV-- 140 Query: 174 LGFRFGN-------------VAYCTDVNAFPA-ESLEKLQNLDFLIIDA------LKNGL 213 +R + Y TD ESL + D L+ + K Sbjct: 141 -AYRLHTPRPKSSASDPPAVLVYATDTLGEDDPESLRWMSGADLLMHECNFDNQNQKWAE 199 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + H L + L P+ +LTH++ +L+ +S + A DG+ + Sbjct: 200 KTGHCYLRKVLDIAGQTKPRRLLLTHINPIAELEIGDEGQSLDCPIEIATDGLSVAF 256 >gi|325685235|gb|EGD27353.1| metallo-beta-lactamase superfamily protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 265 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 52/253 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGID 93 SL ++ +++D G + + + +D V +H H DH G+ Sbjct: 13 NCSLLMT------DQHKILMDAGLSGKKTKELLAKVGVAIEDLDIVFLSHDHGDHSGGM- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 G +++ ++ ++ K+L E+ P VIE Sbjct: 66 ---GVLMRRYPQLNAFSNTGTWKYLEET--------GKIGCLPKDQINVIEPGQTK---- 110 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 G +E H + F +A TD E ++Q+ D +++ Sbjct: 111 -CYGDLEVTAFATSHDAAQPQYYVFSSGGKRLACLTDTGYVSEEVEYEIQDADAYLLEFN 169 Query: 208 ----ALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMV 249 L++G + H S ++ + + + K+ + H + + + Sbjct: 170 YDDLMLRSGPYPWSLQQRVRSDHGHLSNEQAAETLARVISSKTKHVFMAHRSQQNNLNYL 229 Query: 250 LKSTPSRVVPAFD 262 + V+ A D Sbjct: 230 ARDVAEEVLAARD 242 >gi|319651456|ref|ZP_08005584.1| ribonuclease Z [Bacillus sp. 2_A_57_CT2] gi|317396771|gb|EFV77481.1| ribonuclease Z [Bacillus sp. 2_A_57_CT2] Length = 312 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG GA G+P R SS+ + + ERGS + D G Q+ Sbjct: 5 FLGTGA--GIPA--------------KLRNVSSMALKLLDERGSI--WLFDCGEATQHQI 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV--YAAPDCMKHLFESFRY 124 L + I+ + TH H DHI+G+ GL Q +V Y +++ S Sbjct: 47 LHTSIKPRRIEKIFITHLHGDHIYGLPGLLSSRSFQGGDTEVTLYGPKGLKEYIEVSLS- 105 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + YP V E +D I + + L +HG I S G+R Sbjct: 106 --VSGTYLKYP----LKVAEISDGTILDE---KDFKVEARLLEHG-IPSYGYRV 149 >gi|315924637|ref|ZP_07920856.1| beta-lactamase superfamily sulfatase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622167|gb|EFV02129.1| beta-lactamase superfamily sulfatase [Pseudoramibacter alactolyticus ATCC 23263] Length = 271 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 81/259 (31%), Gaps = 46/259 (17%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK T+LG G +L V N + + G TV+ Sbjct: 1 MKK-MELTMLGTGNAL-VTEYYNTCFVIGENNQY-----------FMVDGGGGNTVL--- 44 Query: 61 GPDFYMQVLREQVLSID--AVLYTHPHADHIHGID-GLRGYF-LKQKRPID----VYAAP 112 Q+ +D + TH H DHI GI +R + + +YA Sbjct: 45 -----SQLKHAGFDWMDMREMFVTHKHVDHIMGIIWMIRMICQYMNQGDYEGEANIYAHD 99 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + L + + + R ++ I + + + G I + Sbjct: 100 EVTGILRSAANRLLQKKETRFIDERLHLIEVHDGE---TRNINGNDITF--FDIGSTKAK 154 Query: 173 SLGF--RFGNVAYCTDVNAFP--AESLEKLQNLD-------FLIIDALKNGLHSSHFS-L 220 GF + N T P S + +N D L DA + H S + Sbjct: 155 QFGFCMKLSNGEKLTCCGDEPCEKSSYKYAENSDWLLHEAFCLAEDAGIWNPYEKHHSTV 214 Query: 221 SESLKKIELINPKNAILTH 239 ++ + E +N KN IL H Sbjct: 215 KDACELAEKLNIKNLILYH 233 >gi|300718889|ref|YP_003743692.1| Ribonuclease Z [Erwinia billingiae Eb661] gi|299064725|emb|CAX61845.1| Ribonuclease Z [Erwinia billingiae Eb661] Length = 304 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G P +R +S+ ++ R + D G Sbjct: 1 MELLFLGTGA--GTPS--------------RQRNVTSIALNLQGTRSG--CWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 Q++R QV I+ + TH H DHI G+ GL + +Y + Sbjct: 43 QHQMMRSQVKTGKIEKIFITHLHGDHIFGLPGLLTSRSMNGISDTLTLYGPKGIKAFIDT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + + P+ I + A P+ + GFR Sbjct: 103 TLS--------LSGSWLTFPLEIVEIAAGELFSDEHFRVTAWPLTHP---VECYGFRIE 150 >gi|257783915|ref|YP_003179132.1| beta-lactamase domain-containing protein [Atopobium parvulum DSM 20469] gi|257472422|gb|ACV50541.1| beta-lactamase domain protein [Atopobium parvulum DSM 20469] Length = 280 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 40/183 (21%) Query: 56 VIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G ++LR + +I A+ TH H DH+ G+ K + V+ Sbjct: 28 IMIDCGIS-RKEILRRSKELNVNLSTIVAIFITHEHTDHVVGL----PVVSKTF-DVPVF 81 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A L K+ + T+ I + + P IE H Sbjct: 82 ATTGTAAALTGR-----KSCQNVTFTLIDQAGSVHIDAAP--------DIEINTFPTSHD 128 Query: 170 RISSLGFRF-----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 +G RF +V YCTD E+LE L ++ L I H+ H Sbjct: 129 VCEPMGMRFDFLAGPDRRIVDSVGYCTDTGILTPEALECLSDVRILAI----ESNHNEHM 184 Query: 219 SLS 221 L+ Sbjct: 185 LLT 187 >gi|225010713|ref|ZP_03701182.1| ribonuclease Z [Flavobacteria bacterium MS024-3C] gi|225005084|gb|EEG43037.1| ribonuclease Z [Flavobacteria bacterium MS024-3C] Length = 301 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ +S + N ++D G Sbjct: 1 MKVTILG----------------CYAATPRTLTHPTSQVLEI-----KNHLFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ +++V I+ + +H H DH G+ GL F R P+ +Y K + E Sbjct: 40 QVQLRKQKVRFSKINHIFISHLHGDHFFGLPGLVATFRLLGRVNPLHIYGP----KGIKE 95 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K D T P ++ + + + + + IP+ R+ + GF F Sbjct: 96 AVTLLLKLGDSWTNYP-LHFHELSSQAPEVVFEDKKVTVTTIPLDH---RVYTNGFLF 149 >gi|116754237|ref|YP_843355.1| ribonuclease Z [Methanosaeta thermophila PT] gi|116665688|gb|ABK14715.1| RNAse Z [Methanosaeta thermophila PT] Length = 305 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 101/324 (31%), Gaps = 81/324 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG SL P R+ ++ ++R + ++ D G Sbjct: 2 LQVIFLGTAGSLPTP----------------DRSLPAILVNREGDL-----LLFDCGEGT 40 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF- 119 Q++ R ++ + + TH HADHI GI GL F ++ P+ + P + + Sbjct: 41 QRQMMIARTGMMRLSHIFLTHLHADHILGIPGLLETMAFQGRENPLVIAGPPRTARMVSI 100 Query: 120 ------------------------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Y A+ + P + +++E+ K Sbjct: 101 LNSLGCCTRDFEVRAMEMRPGDAVRMNGYTVTAIATQHSVPSLGYMLLEDMRPGRFNKER 160 Query: 156 ----GGVIEAIPILQQHGRISSLGFRFGN-------------VAYCTDVNAFPAESLEKL 198 G + + Q G I + R + Y D P +E+ Sbjct: 161 AIELGVPVGPMFGRLQKGEIVEIDGRVVRPEDVLGAPRPGRKIVYSGDTR--PTAEIEEA 218 Query: 199 -QNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV-- 249 +N D LI D L+ + + H + E+ + +LTH+ D Sbjct: 219 SRNADLLIHDGALADDMLEWAVETKHTTAGEAAALAARAGVRRLVLTHISSRYSEDTTPL 278 Query: 250 ---LKSTPSRVVPAFDGMQFSSPI 270 + + A D M+ P+ Sbjct: 279 LNDARKVFPETLIASDLMRIDVPL 302 >gi|313122886|ref|YP_004033145.1| metal-dependent hydrolase of the beta-lactamase superfamily i [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279449|gb|ADQ60168.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 265 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 52/253 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGID 93 SL ++ +++D G + + + +D V +H H DH G+ Sbjct: 13 NCSLLMT------DQHKILMDAGLSGKKTKELLAKVGVAIEDLDIVFLSHDHGDHSGGM- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 G +++ ++ ++ K+L E+ P VIE Sbjct: 66 ---GVLMRRYPQLNAFSNTGTWKYLEET--------GKIGCLPKDQINVIEPGQTK---- 110 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 G +E H + F +A TD E ++Q+ D +++ Sbjct: 111 -CYGDLEVTAFATSHDAAQPQYYVFSSGGKRLACLTDTGYVSEEVEYEIQDADAYLLEFN 169 Query: 208 ----ALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMV 249 L++G + H S ++ + + + K+ + H + + + Sbjct: 170 YDDLMLRSGPYPWSLQQRVRSDHGHLSNEQAAETLARVISSKTKHVFMAHRSQQNNLNYL 229 Query: 250 LKSTPSRVVPAFD 262 + V+ A D Sbjct: 230 ARDVAEEVLAARD 242 >gi|294629279|ref|ZP_06707839.1| ribonuclease Z [Streptomyces sp. e14] gi|292832612|gb|EFF90961.1| ribonuclease Z [Streptomyces sp. e14] Length = 301 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 80/294 (27%), Gaps = 83/294 (28%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------DGLRGYFLKQKRP 105 G Q+LR V ++ + TH H DH G+ + ++ + + Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGVIQRINLDQVPHEITAHYPRSGKR 98 Query: 106 ------------------------------IDVYAAP-DCMKHLFESFRYCFKALDDRTY 134 Y + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVALTEVPADSDGVLATTPSYMLQARRLSHPVESYGYRLTEPDGRRM 158 Query: 135 PP-IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE 193 P + I DV + G + +P+ S R A+ D P Sbjct: 159 LPDRLAAHGIAGPDVGRIQRE--GSLNGVPLEA-----VSEVRRGQRFAFVMDTRLCPG- 210 Query: 194 SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 + D L+I++ S H + ++ + ++ +LTH Sbjct: 211 VHALAEGCDLLVIESTFLDEDESLAVEHGHLTAGQAARVAREAGVRHLVLTHFS 264 >gi|294627926|ref|ZP_06706505.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597840|gb|EFF41998.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 249 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGRLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|325687690|gb|EGD29711.1| ribonuclease Z [Streptococcus sanguinis SK72] Length = 309 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + ++ +++Y + Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIYGPKGIKNFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + P ++ + N + +++ H I +G+R Sbjct: 103 LSSLR-----VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCVGYRV 154 >gi|149180959|ref|ZP_01859460.1| YycJ [Bacillus sp. SG-1] gi|148851243|gb|EDL65392.1| YycJ [Bacillus sp. SG-1] Length = 264 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 69/221 (31%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +VD G + Q + ++ + +L TH H+DHI GI L +K + Sbjct: 22 DQNSFLVDAGLSGKQMEALFQKIDRKIKDLTGILVTHEHSDHIKGIG-----ILARKYNL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA K + P I N + + + + G ++ Sbjct: 77 PIYANEKTWKAMD---------------PLIGNVPTEQKFEFGMEKVQSFGSLDIESFGV 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F + TD + N + + +D L+ + Sbjct: 122 SHDAAEPMFYTFHHEGRKLVLVTDTGYVSDRMKGIISNANTYVFESNHDVDMLRMCRYPW 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 H S ++ + + K+ L H+ D Sbjct: 182 SIKRRILSDVGHVSNEDAAIAMSEVFGDQTKSIYLAHLSKD 222 >gi|302529721|ref|ZP_07282063.1| predicted protein [Streptomyces sp. AA4] gi|302438616|gb|EFL10432.1| predicted protein [Streptomyces sp. AA4] Length = 255 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 80/264 (30%), Gaps = 44/264 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S+ P ++ + G + + TG Sbjct: 1 MRLTILGCSGSIPGP-------------------NAAASGYLLEAEGYRLGLELGTGTFA 41 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYAAPDCMK 116 +Q + + +DA++ +H HADH ++ L R + +YA + Sbjct: 42 QLQTVLDPFD-LDALVLSHLHADHCADVNSLTVLRRYHPAPPYPARPRRLPLYAPAEAPS 100 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L ++ + + V I G + + H + G Sbjct: 101 RLAHAYAADAAERAGADLSDVYEFHELREETVQI------GPFDVTAVAVYHPT-PAFGL 153 Query: 177 RFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFSLSESLKKIE 228 R +AY D E +D L+ +A H S E+ + + Sbjct: 154 RIAYGGTILAYTGDT-GLCRGLGELADGVDVLLSEASWTDAADRPEGVHLSGKEAGELAK 212 Query: 229 LINPKNAILTHMHVDLDYDMVLKS 252 +LTH+ D + VL Sbjct: 213 EAGVGRLLLTHIAPWTDRNAVLAE 236 >gi|312867341|ref|ZP_07727550.1| ribonuclease Z [Streptococcus parasanguinis F0405] gi|311097042|gb|EFQ55277.1| ribonuclease Z [Streptococcus parasanguinis F0405] Length = 309 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNQILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPVGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L + P ++ + + + +++ + + + I + Sbjct: 103 MTSLR---------VSGSRLPYRIHFHEFDEHSLGKILETDKFTVYSEALDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRI 154 >gi|282890175|ref|ZP_06298705.1| hypothetical protein pah_c014o026 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499832|gb|EFB42121.1| hypothetical protein pah_c014o026 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 302 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 86/286 (30%), Gaps = 74/286 (25%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG +S PT +N R +N + D G Sbjct: 6 LIILGT-SSQQ------------PTRYRNH--------GAYLFRWNNEGFLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q + V I+ + +H H DH G+ +R K PI Y K F+ Sbjct: 45 QFIFANVAPTVINRIFISHFHGDHCLGLGSILMRLNLDKVTHPIHCYYPAS-GKRYFDRL 103 Query: 123 RY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----------- 161 RY + + IE + +++ G I Sbjct: 104 RYGTIYHENIHVIEHPVSEAGVVHDDGAFKIEATFLDHAVENIGWRITEADTRKFDSEKL 163 Query: 162 ---------IPILQQHGRISSLG----------FRFGN-VAYCTDVNAFPAESLEKLQNL 201 + LQ+HG ++ G R G+ +A D P +E +N Sbjct: 164 RAYGILGPKVKELQKHGHLTIDGNPVSLDDVSHIRKGDSIAIVIDTRVCPQA-VEIAKNA 222 Query: 202 DFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 L+ ++ H H + ++ + + N K ILTH Sbjct: 223 KMLLCESTYLEEHQELAYRHYHMTAKQAAQLAKDANVKELILTHFS 268 >gi|16802970|ref|NP_464455.1| hypothetical protein lmo0930 [Listeria monocytogenes EGD-e] gi|16410332|emb|CAC99008.1| lmo0930 [Listeria monocytogenes EGD-e] Length = 243 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKVIEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + ++ D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAESADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|172056988|ref|YP_001813448.1| ribonuclease Z [Exiguobacterium sibiricum 255-15] gi|254808638|sp|B1YLU8|RNZ_EXIS2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|171989509|gb|ACB60431.1| ribonuclease Z [Exiguobacterium sibiricum 255-15] Length = 301 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 85/292 (29%), Gaps = 80/292 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG GA + P+ +N +S ++ T + D G Sbjct: 1 MEFYFLGTGAGM-------------PSKQRN--------VSAIALLHPKMTWLFDCGEAT 39 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAA----- 111 Q+L + + + TH H DHI G+ F+ + ++ ++ Sbjct: 40 QHQMLHSPIKPRKVSTIFITHLHGDHIFGL----PGFISTRAALEGTTLLTIFGPKGIKE 95 Query: 112 --PDCMKHLFESFRYCFKALD---DRTYPPIVNPIVIENNDVPICMKS-------AGGVI 159 ++ RY ++ +TY I +E + G + Sbjct: 96 WLEATLRITGTYLRYPLDVIEVEAGQTYEQEGFHIHVEALEHRFLAYGYRIEGQEEKGAL 155 Query: 160 EAIPIL---QQHGRI-----SSLGFRFGNVAY-CTDVNAFP---------------AESL 195 + G + F F Y TD P SL Sbjct: 156 HVEALKQLGVPSGPLYRQIKQKETFVFEGTEYQSTDFLGEPKPGIKLAVLGDTVPCEGSL 215 Query: 196 EKLQNLDFLIIDAL---KNGLHS---SHFSLSESLKKIELINPKNAILTHMH 241 + +D L+ +A H+ H + ++ + K +LTH+ Sbjct: 216 RLAEKVDVLVHEATFADSEQDHAGRFGHSTARQAAEIALKAGVKKLLLTHIS 267 >gi|332038227|gb|EGI74673.1| hypothetical protein PH505_ae00730 [Pseudoalteromonas haloplanktis ANT/505] Length = 249 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 30/187 (16%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA----APDCMKHLFESFRYCFKALDDRTY 134 +L TH H DHI G + + + I + A + + + + + Sbjct: 35 ILLTHNHWDHIQGFPFFKPIYQPNRN-ITIVAGNVDDKKSQDAILKQMSGSYFPVCYQDL 93 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF 190 P + ++ + G ++ P+ G + +AY TD Sbjct: 94 PANITLNTDLSSQKQFTLN--GFLVSTAPLNHPGGG---TAYCIKADEKKIAYVTDNELN 148 Query: 191 PAESL--------EKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAI 236 P + L ++ D LI DA L H ++ + + + KN I Sbjct: 149 PPDKLNTSICEWSNFIEGADLLIHDAQFIDADLPLKHGWGHSTIDQVAELAIKASIKNVI 208 Query: 237 LTHMHVD 243 + + D Sbjct: 209 I--ISHD 213 >gi|300811610|ref|ZP_07092090.1| metallo-beta-lactamase domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497405|gb|EFK32447.1| metallo-beta-lactamase domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 265 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 52/253 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGID 93 SL ++ +++D G + + + +D V +H H DH G+ Sbjct: 13 NCSLLMT------DQHKILMDAGLSGKKTKELLAKVGVAIEDLDMVFLSHDHGDHSGGM- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 G +++ ++ ++ K+L E+ P VIE Sbjct: 66 ---GVLMRRYPQLNAFSNTGTWKYLEET--------GKIGCLPKDQINVIEPGQTR---- 110 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 G +E H + F +A TD E ++Q+ D +++ Sbjct: 111 -CYGDLEVTAFATSHDAAQPQYYVFSSGGKRLACLTDTGYVSEEVEYEIQDADAYLLEFN 169 Query: 208 ----ALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMV 249 L++G + H S ++ + + + K+ + H + + + Sbjct: 170 YDDLMLRSGPYPWSLQQRVRSDHGHLSNEQAAETLARVISSKTKHVFMAHRSQQNNLNYL 229 Query: 250 LKSTPSRVVPAFD 262 + V+ A D Sbjct: 230 ARDVAEEVLAARD 242 >gi|225181182|ref|ZP_03734628.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168151|gb|EEG76956.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 264 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T +++D G + S+DA+L +H H DH G + ++ + Sbjct: 21 EQTKLLIDAGLSGKKLAAALTEIDVDPFSLDALLLSHDHNDHTCG-----AGIMARRYRM 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + P+ + +P + + Sbjct: 76 PLYATGPTWQAAACKMG------------PVPEEMC---RTLPSFGEMQFADLTVESFPI 120 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H +GF F ++A TD+ + + LQN++ L+++A Sbjct: 121 PHDAAGPVGFVFRQAEKSIALVTDLGMITPDIFQMLQNVNCLVLEA 166 >gi|108800472|ref|YP_640669.1| ribonuclease Z [Mycobacterium sp. MCS] gi|119869610|ref|YP_939562.1| ribonuclease Z [Mycobacterium sp. KMS] gi|126436095|ref|YP_001071786.1| ribonuclease Z [Mycobacterium sp. JLS] gi|122976740|sp|Q1B671|RNZ_MYCSS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991489|sp|A3Q2B8|RNZ_MYCSJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991490|sp|A1UIW4|RNZ_MYCSK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|108770891|gb|ABG09613.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119695699|gb|ABL92772.1| beta-lactamase domain protein [Mycobacterium sp. KMS] gi|126235895|gb|ABN99295.1| beta-lactamase domain protein [Mycobacterium sp. JLS] Length = 285 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 38/188 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P RR S + R +VD G Sbjct: 2 IEVTLLGTGS----PV------------PDARRAGPSTLV-----RAGGHAFLVDCGRGV 40 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL----RGYFLKQKRPIDVYAAPDCMKHL 118 +++ + + A+L TH H+DHI + L + P+ + P + + Sbjct: 41 QLRMAAAGIAANGLSALLLTHLHSDHIADLGDLLITRWVTTFTDQVPLQIIGPPGTAETV 100 Query: 119 F-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 Y D T PP V + + G + P + Sbjct: 101 TAMLAAFGRDIGYRIAHHPDLTAPPPVEVHEVTEG---VAWDHDGVTVRVAPTDHR-PVA 156 Query: 172 SSLGFRFG 179 ++GFR Sbjct: 157 PTIGFRVE 164 >gi|331647927|ref|ZP_08349019.1| ribonuclease Z [Escherichia coli M605] gi|281179359|dbj|BAI55689.1| conserved hypothetical protein [Escherichia coli SE15] gi|330912097|gb|EGH40607.1| ribonuclease Z [Escherichia coli AA86] gi|331043651|gb|EGI15789.1| ribonuclease Z [Escherichia coli M605] Length = 305 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 87/297 (29%), Gaps = 77/297 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESF-------RYCFKALDDRT-----------------YPPIVNPIVIENNDVPICMKS 154 + Y + ++ T +P IE +D P + + Sbjct: 102 ETALRISGSWTDYPLEIVEISTGEIFDDGLRKVTAYPMEHPLECYGYRIEEHDKPGALNA 161 Query: 155 AGGVIEAIPI-----LQQHGRISSL--GFRFGNVAYCTDVNAFPAESL------------ 195 +P + G+ L G + Y P ++L Sbjct: 162 QALKAAGVPPGPLFQELKAGKTIMLDDGRQINGADYL--AAPVPGKALAIFGDTGPCDAA 219 Query: 196 -EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 E + +D ++ +A H S ++ I+TH+ D Sbjct: 220 LELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREAGVGKLIITHVSSRYD 276 >gi|224119634|ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|222858795|gb|EEE96342.1| predicted protein [Populus trichocarpa] Length = 890 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 28/136 (20%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +R I+AV+ TH H DHI + Sbjct: 103 DRYILIDAGVMFPDYDELGVQKIIPDTTFIRRWKHKIEAVIITHGHEDHIGALP---WVV 159 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +YA+ M+ + + + + P + + K G Sbjct: 160 PALDHNTPIYASSFTMELIKKRLK-----ENGIFVPSRLKVFKTK-------RKFTAGPF 207 Query: 160 EAIPILQQHGRISSLG 175 E PI H G Sbjct: 208 EIEPIRVTHSIPDCCG 223 >gi|121593426|ref|YP_985322.1| beta-lactamase domain-containing protein [Acidovorax sp. JS42] gi|120605506|gb|ABM41246.1| beta-lactamase domain protein [Acidovorax sp. JS42] Length = 260 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 36/166 (21%) Query: 54 TTVIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G L+ ++ +DAV TH H+DH+ + L + I Sbjct: 27 RRLLVDCGLGIRQ--LQWRLEAAGTAPAQLDAVFITHEHSDHVGCVLKLA-----LRERI 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + L P ++ ++ D + G A P Sbjct: 80 PVWMSEGTYDAL---------------GAPDLDGLLHVACD---GVPVDMGSFCAHPFSV 121 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H L R + + TD+ +E+LQ L+++A Sbjct: 122 PHDAREPLHLRCSDGATHIGLLTDLGHAAETVVERLQGCHALLLEA 167 >gi|94269802|ref|ZP_01291566.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|94271698|ref|ZP_01291999.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93450370|gb|EAT01586.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93451074|gb|EAT02022.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 306 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 81/290 (27%), Gaps = 70/290 (24%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFY---MQVLREQVLS--ID-AVLYTHPHADHIHGI 92 +S N +I+D G Q++ +D + TH H DHI G Sbjct: 27 NTSCL-EVRFPELDNRLLIIDAGSGLRGLGNQLMANDFKKGPLDLDLFLTHTHWDHIMGF 85 Query: 93 DGLRGYFLKQKRPIDVYAA----PDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENND 147 ++ + V+ D ++ + Y + + + V+ + ++ Sbjct: 86 PFFVPIYVP-GNRLTVHGPVSYEEDTLRGIVGGQLTYRYFPVREAELAASVDYVELKEGR 144 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF---GNV---AYCTD------VNAFPAESL 195 + + G I H + LG+R G V AY T+ V+ S Sbjct: 145 LEL-----GDGIVVTTRYLNH-PVLCLGYRIEYRGKVFCTAYDTEPYRNLFVSDPADPSY 198 Query: 196 --------------------EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIE 228 E D L+ D + L H + +L Sbjct: 199 DEEMAREGEEVAAEQNQKLAEFFTGADLLVHDTQYTQAEFMPAKLGWGHSTFEHALATAA 258 Query: 229 LINPKNAILTHMHVDLDYDMVLKS--------TPSRVVP--AFDGMQFSS 268 K L H D D D V A +G++ Sbjct: 259 RAGVKRLAL--FHHDPDRDDDQLDKLAARYGGLRDGVEVFCAREGLEVEL 306 >gi|296170278|ref|ZP_06851869.1| possible metal-dependent hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895001|gb|EFG74720.1| possible metal-dependent hydrolase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 26/200 (13%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID----VYAA 111 +++D G + R + VL TH HADH + GL + D +Y Sbjct: 28 LVLDFGGGVLGALQRYADPASVHVLLTHLHADHCLDLPGLFVWRRYHPSRPDGKALLYGP 87 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHG 169 D L Y ++ + + G + P + H Sbjct: 88 GDTWSRL---------GAASSPYGGEIDDCSDIFDVRHWVDGEPVTFGSLTVTPRVVAHP 138 Query: 170 RISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSL 220 S G R + Y D + +E ++ D + +A + + H S Sbjct: 139 T-ESYGMRITDSTGASFVYSGDT-GVCDQLVELARDADVFLCEASWTHSPDRPPALHLSG 196 Query: 221 SESLKKIELINPKNAILTHM 240 +E+ + + +LTH+ Sbjct: 197 TEAGRTATQAGVRELLLTHI 216 >gi|269837215|ref|YP_003319443.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786478|gb|ACZ38621.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 272 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 44/192 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQV-------LSIDAVLYTHPHADHIHGIDG 94 L I G+ T+V++D G LR + +DA+L +H H DHI + Sbjct: 15 LLIQTEGPAGT-TSVLIDAGIPVRR--LRAGLAAAGVPDDGLDAILVSHEHHDHISALPR 71 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L Y ++A M+ L + P ++ + I Sbjct: 72 LVRYQ-----RCPIFATSGTMRALDIA-------------PSDRWERLVPEHSCRI---- 109 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-- 208 G + PI H +GF + A TD+ + A + + +I++A Sbjct: 110 --GSLTITPISVPHDAAEPVGFYVDDGTVRAAIFTDLGSTAALVRDPVAQAHLVILEANY 167 Query: 209 ----LKNGLHSS 216 L+ G + + Sbjct: 168 DVEMLERGPYPA 179 >gi|329768001|ref|ZP_08259512.1| hypothetical protein HMPREF0428_01209 [Gemella haemolysans M341] gi|328838486|gb|EGF88094.1| hypothetical protein HMPREF0428_01209 [Gemella haemolysans M341] Length = 306 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 97/318 (30%), Gaps = 78/318 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + + + + + D G Sbjct: 1 MEVQFLGTGA--GLP---------------GKFRNTQSFVFNFMQE-LKECWMFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+LR + I + +H HADH+ G+ G R + L + +Y + Sbjct: 43 QHQILRTNIKPTKITKIFISHLHADHVLGLIGFLSSRSFLLDTNASDVTIYGPVGIKDFI 102 Query: 119 FE-------SFRYCFKALDDRTYPPIVN-----------PIVIENNDVPICMKSAGGVIE 160 S Y + ++ + I++ IE I K G ++ Sbjct: 103 ENNLLFTHCSLSYSVEYIEISSEQCIIDNKSVAVFSYPLAHNIECFGYKILFKKQKGSLD 162 Query: 161 --------AIPILQQHGRISSLGFRFGNVAYCTD-----------VNAFPAESL-----E 196 +P + F F + Y + ++ P E Sbjct: 163 ANKLKELGIMPGPFYREIKEADTFEFNGIMYNSSEFLSEDKPEKEISIIPDTRYFDGLGE 222 Query: 197 KLQNLDFLIIDA---LKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYD-- 247 ++N + +I + LK H + H S+ + K I ++ LTH+ D + Sbjct: 223 FVKNSNIIISECTYLLKEDAHHARKNYHLSILDIEKIIAQSKVESLFLTHISARYDRNIE 282 Query: 248 -MVLKSTPS--RVVPAFD 262 ++S V A D Sbjct: 283 KEAIESLHDKCNVKIAHD 300 >gi|312142850|ref|YP_003994296.1| coenzyme PQQ synthesis protein B [Halanaerobium sp. 'sapolanicus'] gi|311903501|gb|ADQ13942.1| coenzyme PQQ synthesis protein B [Halanaerobium sp. 'sapolanicus'] Length = 295 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 58/282 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIV 58 M D +LG G P++ C + +R +SSL + ++ + + Sbjct: 1 MVDRALIKVLGTAQDAGHPQLNCQCSHCQAARTDASLKRLQSSLAL---IDKKEQKSFVF 57 Query: 59 DTGPDFYMQV--LRE-------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 D P F Q+ L E V + +L +H H H G+ L L + + VY Sbjct: 58 DASPAFSEQLDNLNELVRKKNYSVDHLSGILLSHAHLGHYLGLLYLGKEALNTSQ-LPVY 116 Query: 110 AAPDCMKHLFESFRY--CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + L + + FK + + E + I + + Sbjct: 117 LSQKMFDFLKNNAPWSDLFKNGNIKA----------EVFEFEKEYNLT-KEIRFKAVEIK 165 Query: 168 HGRI--SSLGFRFGN----VAYCTDVN---AFPAESLEKLQNLDFLIIDA---------- 208 H + F Y D++ F + E L +D++ +D Sbjct: 166 HRNEYADTAAFIVNTQEKAFFYLPDLDSWQGFERKFREILAEVDYVFLDGTFFDKKELGE 225 Query: 209 -----LKNGLHSSHFSLSESLKKIELI-NPKNA--ILTHMHV 242 LK H + E++K + + + TH + Sbjct: 226 LRGRDLKEVPHPP---IIETIKLFSDLNKAERSKIYFTHFNH 264 >gi|257791634|ref|YP_003182240.1| beta-lactamase domain-containing protein [Eggerthella lenta DSM 2243] gi|257475531|gb|ACV55851.1| beta-lactamase domain protein [Eggerthella lenta DSM 2243] Length = 273 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 94/288 (32%), Gaps = 65/288 (22%) Query: 29 DPTNPKNRRTRSSLKISRVSERG---------SNTTVIVDTGPDFYMQVLR-----EQVL 74 NP N+R +L + RG + V+VD G R Sbjct: 2 REANPMNQRL--ALHVLASGSRGNAAVVEDTATGKGVLVDCGICKRDFFARCDEAGFDPA 59 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +++AVL TH H DH G+ + K V+A + + Sbjct: 60 NLEAVLITHDHTDHTKGLGVVLRGLAKLGIEPAVFADDAVRAA----------SKEIIVL 109 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF 190 + + D + AG + A H SS GFR V + TD Sbjct: 110 EGACDLRAFSSGD---ALSLAGMQVHA--FRTSHDAASSCGFRVEADGDAVGFMTDTGIV 164 Query: 191 PAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELI--- 230 E+ E L+++ L +++ LK+G + H S ++ ++E + Sbjct: 165 TGEADEALRDVRILALESNHDVQMLKDGPYPYPVKRRVGSDTGHLSNVQAADELEALLSD 224 Query: 231 NPKNAILTHMH-----VDLDYDMV-----LKSTPSRVVPAFDGMQFSS 268 + + H+ L + + P+ V A+ M S+ Sbjct: 225 ALEQVVAMHISQNNNTYRLPGEALTAVVRRAGHPATVQVAYQTMLVSA 272 >gi|242055843|ref|XP_002457067.1| hypothetical protein SORBIDRAFT_03g000750 [Sorghum bicolor] gi|241929042|gb|EES02187.1| hypothetical protein SORBIDRAFT_03g000750 [Sorghum bicolor] Length = 932 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 89/314 (28%), Gaps = 97/314 (30%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ T LG G+S P R SS+ I+ + G +++D G Sbjct: 579 REDMEITFLGTGSSQ----------------PSKYRNVSSIYINLFARGG----ILLDCG 618 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL-------------RGYFL 100 Q+ R E V + + +H HADH G+ + + + Sbjct: 619 EGTLGQLKRRFGVNGADEAVKGLRCIWISHIHADHHTGLARILALRSKLLRGMPHKPLLV 678 Query: 101 KQKRPIDVYAAPD-CMKHLFESFRYC-----------FKALDDRTYPPIVNPIVIENN-- 146 RP++ + ++ L F C D P + + Sbjct: 679 IGPRPLERFLNAYSTLEDLDMQFLDCRHTLKSSVEAFLSENDSEPAIPQLANTIFAPGSR 738 Query: 147 ------------------DVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------- 179 + ++ +G I + H + G F Sbjct: 739 MENYNRKPASPRDTTALANFKEVLQESGLEI-LYSVPVLHCP-QAFGVVFRAMEKTNSTG 796 Query: 180 ------NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKI 227 V Y D PA ++ ++ LI +A +H + E+++ Sbjct: 797 KVIPGWKVVYSGDTRPCPAL-IDASRDATVLIHEATFEDSMKDEAIARNHSTTKEAIEVG 855 Query: 228 ELINPKNAILTHMH 241 ILTH Sbjct: 856 TSAGAYRIILTHFS 869 >gi|254487508|ref|ZP_05100713.1| coenzyme PQQ biosynthesis protein B [Roseobacter sp. GAI101] gi|214044377|gb|EEB85015.1| coenzyme PQQ biosynthesis protein B [Roseobacter sp. GAI101] Length = 298 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 92/303 (30%), Gaps = 58/303 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G+P+ C+ P T+SS+ S + PD Sbjct: 7 ILGAAAGGGLPQWNCGCENCNLARAGAIPSQ--TQSSIAFSANDRDWAILN----ASPDI 60 Query: 65 YMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+ + VL + +VL T+ DHI G+ L++++P ++A D Sbjct: 61 RQQIAQTPVLHPTDLRRSPLRSVLLTNGDIDHIAGL-----LTLREQQPFKLFATKDIHA 115 Query: 117 HLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-------GVIEAIPILQQ 167 L + F R + + I G G + + Sbjct: 116 VLANNPVFDALNPNFVTRETIELGETVEIAPGLRATLFAVPGKVPLYLEGASVQTDLEGE 175 Query: 168 HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------------KNGL 213 L + Y + F + +++ D + D K G Sbjct: 176 QTVGVCLQAKDKTAYYIPGCSTFKPDLRARIEGADAVFFDGTLWQDDEMVAAGLSQKTGQ 235 Query: 214 HSSHFSL---SESLKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SRVVPAFDG 263 H S+ S++ + + HM+ ++ +P S A DG Sbjct: 236 RMGHMSMAGSDGSIEAFKELKIIQKFFVHMNNTNP--VLRPGSPQRKQAEASGWTIAQDG 293 Query: 264 MQF 266 M+ Sbjct: 294 MEI 296 >gi|195941574|ref|ZP_03086956.1| ribonuclease Z [Borrelia burgdorferi 80a] gi|216264266|ref|ZP_03436258.1| ribonuclease Z [Borrelia burgdorferi 156a] gi|221217951|ref|ZP_03589418.1| ribonuclease Z [Borrelia burgdorferi 72a] gi|223889381|ref|ZP_03623967.1| ribonuclease Z [Borrelia burgdorferi 64b] gi|224532603|ref|ZP_03673225.1| ribonuclease Z [Borrelia burgdorferi WI91-23] gi|224533321|ref|ZP_03673915.1| ribonuclease Z [Borrelia burgdorferi CA-11.2a] gi|225548941|ref|ZP_03769918.1| ribonuclease Z [Borrelia burgdorferi 94a] gi|225550009|ref|ZP_03770970.1| ribonuclease Z [Borrelia burgdorferi 118a] gi|226320743|ref|ZP_03796300.1| ribonuclease Z [Borrelia burgdorferi 29805] gi|215980739|gb|EEC21546.1| ribonuclease Z [Borrelia burgdorferi 156a] gi|221192257|gb|EEE18477.1| ribonuclease Z [Borrelia burgdorferi 72a] gi|223885067|gb|EEF56171.1| ribonuclease Z [Borrelia burgdorferi 64b] gi|224512459|gb|EEF82838.1| ribonuclease Z [Borrelia burgdorferi WI91-23] gi|224513486|gb|EEF83843.1| ribonuclease Z [Borrelia burgdorferi CA-11.2a] gi|225369468|gb|EEG98920.1| ribonuclease Z [Borrelia burgdorferi 118a] gi|225370544|gb|EEG99980.1| ribonuclease Z [Borrelia burgdorferi 94a] gi|226233855|gb|EEH32579.1| ribonuclease Z [Borrelia burgdorferi 29805] gi|312148092|gb|ADQ30751.1| ribonuclease Z [Borrelia burgdorferi JD1] gi|312149473|gb|ADQ29544.1| ribonuclease Z [Borrelia burgdorferi N40] Length = 319 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 98/334 (29%), Gaps = 95/334 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYDGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADH-----------------------IHGIDGLRGYF 99 M + ++++ I + TH HADH I G G++ Y Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKNYT 101 Query: 100 LKQKRPIDVYAA-------------------------PDC-MKHLFESFRYCFKALDDRT 133 + +Y +KH E Y F D Sbjct: 102 QANINMLKIYKNYEIIYKEIIIDKTEKIIYEDKTKKIEYTKLKHSIECVGYLFIEKDK-- 159 Query: 134 YPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P N E ++P G I + + I + VAY TD Sbjct: 160 -PGKFNTEKAEELNIPKGPIRKALQDGKEILVNGKIIKPSEILGKSKKGLKVAYITDTGY 218 Query: 190 FPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH-- 241 F E +++++N + +II++ LK H + + ++ L H Sbjct: 219 F-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGGAANIVKQAKVLQTGLIHFSER 277 Query: 242 ----VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 DL+ P + DGM+ + Sbjct: 278 YTLRKDLENLLKEAKLEYPDGEIFLTRDGMRLEA 311 >gi|158523037|ref|YP_001530907.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511863|gb|ABW68830.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 268 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 51/223 (22%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G +T ++VD G + + + S+DA++ +H H DH+ G L ++ Sbjct: 32 SGPDTAILVDAGLSGVEIERRLATIGVNPRSLDAIVISHEHTDHVRG-----AGILCRRH 86 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y K +DD Y + + P Sbjct: 87 KLPLYITAPTHKAALAQLG----GIDDCRY-------------FACGQSFSINTLTIHPF 129 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H GF F TD+ E L+ LI++A Sbjct: 130 SLSHDARDPSGFTFQSGGAKAGLATDLGVATTMVREHLKGCGALILEANHDAEMLLNGSY 189 Query: 209 -----LKNGLHSSHFSLSESLKKIELINPK---NAILTHMHVD 243 + + H S +S++ + ++ K + +L H+ + Sbjct: 190 PWPVKQRIKSRNGHLSNDDSMRLLAELDHKDLAHVVLAHLSHE 232 >gi|166031523|ref|ZP_02234352.1| hypothetical protein DORFOR_01223 [Dorea formicigenerans ATCC 27755] gi|166028500|gb|EDR47257.1| hypothetical protein DORFOR_01223 [Dorea formicigenerans ATCC 27755] Length = 302 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 91/328 (27%), Gaps = 124/328 (37%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P R +SL + + +++++D G + Sbjct: 6 LLGTGGMMPLP----------------YRWLTSLLVRY-----NGSSLLIDCGEGTQI-A 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGI----------DGLRGYFLKQKRPIDVYAAPDCM 115 ++E+ ID + +TH H DHI G+ D L I + Sbjct: 44 IKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTL-----IGPKGLERVV 98 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIV--IENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L R P + + IE + G ++A H ++ Sbjct: 99 NSL-------------RVIAPELPFQIKYIEITQPEQIFEMNGYRLKA--FRVNH-NVTC 142 Query: 174 LGF-----RFGNV----------------------------------------------A 182 G+ R G Sbjct: 143 YGYTMEIDRAGKFDVDRANEAAIPQKFWGSLQKGENVQDGDNLYTPDMVLGPARKGIKLT 202 Query: 183 YCTDVNAFPAESLE-KLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKN 234 YCTD P +S+ + D I D LK H + E+ + + Sbjct: 203 YCTDTR--PTDSIRNNAKGSDLFICEGMYGEKDKLKKAKEYKHMTFYEAAQLAKEAEVAE 260 Query: 235 AILTHMHVDLDY-----DMVLKSTPSRV 257 LTH L + D V K P+ + Sbjct: 261 MWLTHYSPSLTHPEEYMDEVKKIFPNSI 288 >gi|328881878|emb|CCA55117.1| Adenosylcobinamide-phosphateguanylyltransferase [Streptomyces venezuelae ATCC 10712] Length = 400 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA LG+PR C + R ++L + + +++D P Sbjct: 1 MELTLLGTGAPLGLPRPDCPCAVCALSRGPRVRAATALLV--------DGALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 + R ++ + VL THPH Sbjct: 53 ALAAARSGHSLVGVRQVLLTHPH 75 >gi|301063472|ref|ZP_07204004.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] gi|300442411|gb|EFK06644.1| metallo-beta-lactamase domain protein [delta proteobacterium NaphS2] Length = 257 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 76/215 (35%), Gaps = 43/215 (20%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G + M + S+DA+ TH H DH+ G+ L ++ + Sbjct: 20 GSARILVDAGLSGIEIERRMAAVGVSPQSLDAIFVTHEHTDHVKGVG-----VLARRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + ++ K ++ + + A+ Sbjct: 75 PVYANRETLDCAQKALG---KLPSVISFQTGETLTINNLSIETFTKCHDAADPTALVFRN 131 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---------------ALKN 211 G + G V TD+ + ++L+ + LI++ LK Sbjct: 132 N-------GIKIGLV---TDMGRSTRLAEDRLRACNVLILEFNYDPTMLSEGPYPLDLKR 181 Query: 212 GLHSS--HFSLSESLKKIELINP---KNAILTHMH 241 +H S H S ++ + +E ++ + +L H+ Sbjct: 182 RIHGSEGHLSNQQAGELLETLSHDDLEYLVLAHLS 216 >gi|240047773|ref|YP_002961161.1| putative serine protease, subtilase family act [Mycoplasma conjunctivae HRC/581] gi|239985345|emb|CAT05358.1| Putative serine protease, subtilase family act [Mycoplasma conjunctivae] Length = 717 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 78/212 (36%), Gaps = 32/212 (15%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 N VI+D G F Q L++ I V TH H DHI GI Sbjct: 27 EDDNDIVIIDAGIKFANIFATGIKGMVPDYQYLKQNESKIRGVFITHGHEDHIGGI---- 82 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +L ++ I +Y A ++ L F K ++ + I V + N + + +A Sbjct: 83 -AYLVRQVQIKAIYGAKIAIEFLKAKFADL-KIHENVKFIEINKDDVYKFNTLSVDFWTA 140 Query: 156 GGVIE---AIPILQQHGRISSLG-FRFG--NVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 I I I HG I G FRF + TD + +++ QNL L D Sbjct: 141 QHSIPDAFGIRITSPHGSIMCTGDFRFDYTPIGNYTDFDRL--KTIGD-QNLTVLFSDST 197 Query: 208 -ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 A++ S + ++ K I+T Sbjct: 198 NAMRPNHSPSEKDILSDIEMHMRSATKKIIIT 229 >gi|27381847|ref|NP_773376.1| pyrroloquinoline quinone biosynthesis protein PqqB [Bradyrhizobium japonicum USDA 110] gi|32129893|sp|Q89FG4|PQQB_BRAJA RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|27355016|dbj|BAC52001.1| coenzyme PQQ synthesis protein B [Bradyrhizobium japonicum USDA 110] Length = 309 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 30/164 (18%) Query: 19 PRITGDWGACDPTNP---KNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV------- 68 P+ C + RT++S+ S E +++ PD Q+ Sbjct: 16 PQWNCGCEGCRTARAIGDELLRTQASVAFSGDGEHW----FLINASPDLRQQLNATPQLH 71 Query: 69 -----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 LR + V+ T+ D + G+ +R + P VYA + L + Sbjct: 72 PKPGALRH--TPVAGVILTNGEVDAVAGLLSMR-----EGSPFTVYAHEKVLAILSAN-- 122 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 F L+++ PI I P + A IE +P Sbjct: 123 SIFNVLNEKNVR--RQPIAISEPFEPRLVDGARSGIEVLPFAVP 164 >gi|327314652|ref|YP_004330089.1| putative ribonuclease Z [Prevotella denticola F0289] gi|326944046|gb|AEA19931.1| putative ribonuclease Z [Prevotella denticola F0289] Length = 308 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L P + SS + ++D G Sbjct: 4 FKVRILGCGSAL----------------PTLQHFPSSQVVEL-----REKLFMIDCGEGT 42 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ LR I AV +H H DH G+ G+ F R P+ +YA L + Sbjct: 43 QIQLRRLRIHFSKIIAVFISHLHGDHCFGLPGMLSTFGMTGRTAPLHIYAPAAFGPLLCQ 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + L V ++ + + +E IP+ RI G+ F Sbjct: 103 TLEFFCQGLGFE-----VIFHAVDTTRNKVVYEDRSLTVETIPLQH---RIECCGYLF 152 >gi|325508361|gb|ADZ19997.1| ComE-like protein, Metallo beta-lactamase superfamily hydrolase, secreted [Clostridium acetobutylicum EA 2018] Length = 320 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 73/205 (35%), Gaps = 20/205 (9%) Query: 50 RGSNTTVIVDTGPD----FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++DTG + M L+ V ID ++ THPH DHI G D + F Sbjct: 56 QCGGKNMLIDTGTNESTSNLMSYLKNQNVQKIDYLVLTHPHEDHIGGADEVINNFNIGTI 115 Query: 105 PID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + V K + ++ R NP+V V G I Sbjct: 116 YMPNVATNTQTYKDVIQAMR--------NKGLTATNPVVGSTFKVGSANCIVYGPINTNS 167 Query: 164 ILQQHGRISS-LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 I L + + D + + + D L D LK G H SH S S+ Sbjct: 168 ENLNTYSIVIKLTYGNNKFMFTGDAQSSNEQDM-INAGFD-LSADVLKVGHHGSHTSSSQ 225 Query: 223 SLKKIELINPKNAILT-HMHVDLDY 246 + +NPK A+++ + D + Sbjct: 226 --DFLNAVNPKYAVISCGLGNDYGH 248 >gi|324112802|gb|EGC06778.1| ribonuclease BN [Escherichia fergusonii B253] Length = 305 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 38/182 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ + + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQAGL-WLFDCGE 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKH 117 Q+L +D + +H H DH+ G+ GL R + P+ +Y + Sbjct: 42 GTQHQLLSTSYNPGKLDRIFISHLHGDHLFGLPGLLCSRSMAGSMQ-PLTIYGPKGIQEF 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + R D YP ++ I I ++ + + A P+ + GFR Sbjct: 101 VETALRLSSSWTD---YP--LDIIEISAGEI---LDDGLRKVTAYPMEHP---LECYGFR 149 Query: 178 FG 179 Sbjct: 150 IE 151 >gi|222110136|ref|YP_002552400.1| beta-lactamase domain-containing protein [Acidovorax ebreus TPSY] gi|221729580|gb|ACM32400.1| beta-lactamase domain protein [Acidovorax ebreus TPSY] Length = 260 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 36/166 (21%) Query: 54 TTVIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G L+ ++ +DAV TH H+DH+ + L + I Sbjct: 27 RRLLVDCGLGIRQ--LQWRLEAAGTAPAQLDAVFITHEHSDHVGCVLKLA-----LRERI 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + L P ++ ++ D + G A P Sbjct: 80 PVWMSEGTYDAL---------------GAPDLDGLLHVACD---GVPVDMGSFCAHPFSV 121 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H L R + + TD+ +E+LQ L+++A Sbjct: 122 PHDAREPLHLRCSDGATHIGLLTDLGHAAETVVERLQGCHALLLEA 167 >gi|16082439|ref|NP_394925.1| hypothetical protein Ta1474 [Thermoplasma acidophilum DSM 1728] gi|10640814|emb|CAC12592.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 264 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 71/217 (32%), Gaps = 61/217 (28%) Query: 56 VIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G R+ + S+D ++ +H H+DHI G+ Y +DVY Sbjct: 39 IVIDLGITMKK--FRDSIKSLDLAGRSISLFISHEHSDHIGGVPTTSKYV-----DMDVY 91 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P L SFR +D G E H Sbjct: 92 MRP----ALSGSFRRKTYEMDGSLVV---------------------GNFEIRAFEIPHD 126 Query: 170 RISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS---- 215 +GF ++ +D+ +E ++N D L ++ L+ G + Sbjct: 127 AADPVGFSVLWHNRKISVVSDLGKVTDRVIESIRNSDILAFESNHDVEMLRTGSYPEALK 186 Query: 216 -------SHFSLSESLKKIELINPK--NAILTHMHVD 243 H S +S + I + ILTH+ + Sbjct: 187 RRILSDHGHLSNEQSAEAISRVATDDMRIILTHLSQE 223 >gi|300784164|ref|YP_003764455.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Amycolatopsis mediterranei U32] gi|299793678|gb|ADJ44053.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Amycolatopsis mediterranei U32] Length = 243 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 26/193 (13%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 R S RG+ TV +D GP + + +DA+ +H HADH+ L Sbjct: 16 RPGEPCSGYLVRGNGATVWLDAGPGTLAALQEHTALTDVDAIWISHLHADHVA---DLLP 72 Query: 98 YFL-------KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 + P+ +Y P L + A ++ + V E +D Sbjct: 73 AVYALLFADLRPAGPLPLYGPPGIRDRLADFLGNTGPAPIEQAF------HVHELHDGHF 126 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLII 206 + +HG + G R + +AY D A + E D + Sbjct: 127 T---EVNGLTLATSAVEHG-FPAFGVRVTDGDRVLAYSGDTGPCAALT-ELANGADLFLC 181 Query: 207 DALKNGLHSSHFS 219 +A + H + Sbjct: 182 EADGPEPSAVHLT 194 >gi|300704483|ref|YP_003746086.1| metal-dependent hydrolase of the beta-lactamase superfamily i [Ralstonia solanacearum CFBP2957] gi|299072147|emb|CBJ43479.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum CFBP2957] Length = 261 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S+ ++T V++D G V L S+DA+L TH H DHI Sbjct: 16 ALLVESSDGTTSTRVLLDCGFGIRETVRRLERLGCAPESLDAILVTHEHGDHIG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM---K 153 Y K I V+ + Y + + + C Sbjct: 71 AYAFAAKYNIPVWTSHGT-------------------YRATASLRGADRAAIRFCRADDV 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + +P H L F F + + TD L L +++ Sbjct: 112 FSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLHAFVLEC 170 >gi|331683945|ref|ZP_08384541.1| ribonuclease Z [Escherichia coli H299] gi|331078897|gb|EGI50099.1| ribonuclease Z [Escherichia coli H299] Length = 305 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|27468149|ref|NP_764786.1| hypothetical protein SE1231 [Staphylococcus epidermidis ATCC 12228] gi|57867063|ref|YP_188686.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251810961|ref|ZP_04825434.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis BCM-HMP0060] gi|293366494|ref|ZP_06613171.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|27315695|gb|AAO04830.1|AE016748_64 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637721|gb|AAW54509.1| metallo-beta-lactamase family protein [Staphylococcus epidermidis RP62A] gi|251805471|gb|EES58128.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis BCM-HMP0060] gi|291319263|gb|EFE59632.1| metallo-beta-lactamase [Staphylococcus epidermidis M23864:W2(grey)] gi|329735290|gb|EGG71582.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU045] gi|329737336|gb|EGG73590.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU028] Length = 207 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 20/145 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D + Q + +++ I+ A+L TH H DHI +D + +K Sbjct: 19 ENEENVILIDPSSE--SQKIIKKLNQINKPLKAILLTHAHYDHIGALD-----NIIEKYQ 71 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VY + D L + + + IE++ P+ + IE Sbjct: 72 VPVYMSKDEFDFLTD------PDKNGSSKFTQYGLSKIESHANPLSLSEGPAEIEGFKFK 125 Query: 166 QQHGRISSLG---FRFGNVAYCTDV 187 H S G F F + A D Sbjct: 126 VLHTPGHSPGSLSFVFNDFAVVGDT 150 >gi|224054386|ref|XP_002298234.1| predicted protein [Populus trichocarpa] gi|222845492|gb|EEE83039.1| predicted protein [Populus trichocarpa] Length = 829 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 93/328 (28%), Gaps = 86/328 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +S+ I+ S ++++D G Sbjct: 489 RDDLEVVLLGTGSSQ----------------PSKYRNVTSIYINLFS----KGSLLLDCG 528 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDV 108 Q+ R V ++ + +H HADH G+ + P+ V Sbjct: 529 EGTLGQLKRRYGVEGADNAVRNLRGIWISHIHADHHTGLARILALRRDLLKGMTHEPVLV 588 Query: 109 YAAPDC---------MKHLFESFRYC--------------------------FKALDDRT 133 ++ L F C ++ R Sbjct: 589 VGPWQLKKFLDAYQRLEDLDMQFIDCRSTTEASWMKNPTLNTESNLFARGNRMQSYWKRP 648 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF------RF---GNVAYC 184 P+ N +V + + S G+ I H + G R G V Sbjct: 649 GSPVDNGMVFPSLKRLKEVLSEAGLEALISFPVVHCP-QAFGIALKAAERINTVGKVIPG 707 Query: 185 TDVNAFPAESLEKLQNL---DFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + + D L+ +A+ +H + E+++ ILTH Sbjct: 708 WKIKHLVEQPFSYTRQATFEDALVEEAIAR----NHSTTEEAIEVGNSAGAYRIILTHFS 763 Query: 242 VDLDYDMVLKSTPSRVV-PAFDGMQFSS 268 V T AFD M + Sbjct: 764 QRYPKIPVFDETHMHKTCIAFDMMSVNI 791 >gi|21241852|ref|NP_641434.1| hypothetical protein XAC1096 [Xanthomonas axonopodis pv. citri str. 306] gi|21107233|gb|AAM35970.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 249 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF ++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERMFVDSYFSARRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|31981497|ref|NP_444485.2| zinc phosphodiesterase ELAC protein 1 [Mus musculus] gi|41017770|sp|Q8VEB6|RNZ1_MOUSE RecName: Full=Zinc phosphodiesterase ELAC protein 1; AltName: Full=ElaC homolog protein 1; AltName: Full=Ribonuclease Z 1; Short=RNase Z 1; AltName: Full=tRNA 3 endonuclease 1; AltName: Full=tRNase Z 1 gi|148677608|gb|EDL09555.1| elaC homolog 1 (E. coli), isoform CRA_b [Mus musculus] Length = 362 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 84/336 (25%), Gaps = 121/336 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + ++PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVARQPIEIYGPVGLR 100 Query: 116 KHLFES---------FRYCFKAL-DDRTYPPIVNPIVIENNDVPICMKSAGG-------- 157 ++ + F Y L P+ + D G Sbjct: 101 DFIWRTMELSHTELVFPYVVHELVPTADQCPVEELREFAHMDETDSSPKGQGRTILLDAE 160 Query: 158 ----------VIEAIPILQQHGRISSLGF------RFGNV--------------AY---- 183 H RI S GF R G + AY Sbjct: 161 ENSYCLVDDEQFVVKAFRLFH-RIPSFGFSVVEKKRAGKLNAQKLRDLGVPPGPAYGKLK 219 Query: 184 ------------------------------CTDVNA-FPAESLEKLQNLDFLIIDAL--- 209 D + ++ D LI +A Sbjct: 220 NGISVVLDNGVTISPQDVLKKPMVGRKVCILGDCSGVVGDGGVKLCFEADLLIHEATLDD 279 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 K H H + + +L K +LTH Sbjct: 280 SQMDKAREHG-HSTPQMAAAFAKLCRAKRLVLTHFS 314 >gi|315298072|gb|EFU57341.1| ribonuclease Z [Escherichia coli MS 16-3] Length = 305 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP + + I ++ + A P+ + G+R Sbjct: 102 ETALR---ISGSWTDYP--LEIVEIGAGEI---FDDGLRKVTAYPLEHP---LECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|294792186|ref|ZP_06757334.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] gi|294457416|gb|EFG25778.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] Length = 268 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 51/217 (23%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H+DHI G+ L ++ + Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMAQVEGIFVSHEHSDHIAGLQQLL-----KRFDL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNRLIELTKGSLTL----GGLTVEPFSV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH-- 214 H +G TD + L +L + L+++A L+ G + Sbjct: 124 SHDAADPIGINVFAGNDKATVVTDTGVISDDILRRLDDTTLLVLEANYDPHMLRFGPYQP 183 Query: 215 ---------SSHFS---LSESLKKIELINPKNAILTH 239 H S +++L ++ N IL H Sbjct: 184 FLKQRVASDEGHLSNEMAAQALLMMKRPNFMQVILAH 220 >gi|118443822|ref|YP_878702.1| metallo beta-lactamase superfamily hydrolase [Clostridium novyi NT] gi|118134278|gb|ABK61322.1| Metallo beta-lactamase superfamily hydrolase [Clostridium novyi NT] Length = 317 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 72/210 (34%), Gaps = 36/210 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S + + T+++D GP+ +L + +D V+ THPH DHI G+D + Sbjct: 71 SALVQQ-----DGYTMLIDAGPNSAENILVNYIRGLGIKRLDYVIGTHPHEDHIGGLDKV 125 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + + K D + I + Sbjct: 126 ID-NFEIGTLLMPKKIANT------------KTFKDVLLAAKHKGLNITQPIIGTNYNLG 172 Query: 156 GGVIEAIPILQQHGRISSLGF------RFGN--VAYCTDVNAFPAESLEKLQNLDFLIID 207 + + H S+ + RFGN + D F + +L D D Sbjct: 173 KATFRILA-PKDHAYKSTNNYSIVQKLRFGNRSFIFTGDAEKFSESEILQL-GYDI-KAD 229 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S + S ++ +NPK A++ Sbjct: 230 VLKVGHHGSKTSSTNS--FLDKVNPKYAVI 257 >gi|94264884|ref|ZP_01288658.1| Beta-lactamase-like [delta proteobacterium MLMS-1] gi|93454654|gb|EAT04922.1| Beta-lactamase-like [delta proteobacterium MLMS-1] Length = 261 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 51/221 (23%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ +++D G + + L + + A+L +H H DHI G L ++ Sbjct: 21 EAGSSRLLIDAGFSGRELESRLAALGVEPGQLTAILLSHEHGDHIRG-----AGVLSRRH 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + + A + P + + G + P Sbjct: 76 HLPLLLNKATLAA----------AGRELGRPAAIQ-------EFTTGRSFTCGDFQIHPF 118 Query: 165 LQQHGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +GF R G + +CTD+ +L L+++ L+ G + Sbjct: 119 ALSHDAAEPVGFLLRAGGRTLGHCTDLGVVSRLVRHRLSGCQALVLECNHDPEMLRQGPY 178 Query: 215 SS-----------HF-SLSESLKKIELINP--KNAILTHMH 241 H + + EL++ + +L+H+ Sbjct: 179 PPALQQRVSSRQGHLANQETATLLTELLHAELRQVVLSHLS 219 >gi|315641353|ref|ZP_07896429.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482926|gb|EFU73446.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 268 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 40/161 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I +++D G MQ + + +DA+ TH H DHIHG+ Sbjct: 20 SLYIE-----SEKKKILIDAGLSGKKITSLMQEVGKTPAELDAIFVTHEHRDHIHGVG-- 72 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K + +YA + + P I N V + + Sbjct: 73 ---VLARKYHLPIYANEKTWEAMA---------------PLIGNVPVEQKFIFDMGATLT 114 Query: 156 GGVIEAIPILQQHGRISSLGFRFG----------NVAYCTD 186 G ++ H + ++F + YC+D Sbjct: 115 FGDLDIESFGVSHDAAAPQFYKFNKDGKSFVMLTDTGYCSD 155 >gi|227529067|ref|ZP_03959116.1| ribonuclease Z [Lactobacillus vaginalis ATCC 49540] gi|227351079|gb|EEJ41370.1| ribonuclease Z [Lactobacillus vaginalis ATCC 49540] Length = 309 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 40/183 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + E + D G Sbjct: 1 MQLEFLGTGAGS----------------PSKQRNVTSVALKLLEELNEI--WLFDAGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA----PDCMK 116 Q+L + + + TH H DHI G+ G Q P+ +Y M Sbjct: 43 QHQILHTTIRPRKVTKIFITHLHGDHIFGLPGFLSSRSFQGGNEPLTIYGPVGIKKFVMT 102 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + +YP + + I+++ + + + H +I+ G+ Sbjct: 103 ALQ-------VSESRLSYP--LKFVEIDHSQELFNERG----FKVTTMSLDH-KIACYGY 148 Query: 177 RFG 179 R Sbjct: 149 RIE 151 >gi|28209938|ref|NP_780882.1| beta-lactamase superfamily protein [Clostridium tetani E88] gi|28202373|gb|AAO34819.1| beta-lactamase superfamily protein [Clostridium tetani E88] Length = 261 Score = 56.7 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 50/230 (21%) Query: 53 NTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T +++D G + + E S+DA+L TH H DHI G+ L ++ + Sbjct: 21 DTKILIDAGVAGKHIENSLKNIGENPNSLDAILVTHEHTDHIKGVG-----VLSRRYDLP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y+ P + + P + I N ++ Sbjct: 76 IYSHPLTWEAML----------------PSIGKIKDHNIRFIDEKYINIKDMDIHGYKIP 119 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS-- 215 H LGF TD+ F E ++ L++ D L+ ++ LK G + Sbjct: 120 HDAAYPLGFSLNSNNKKFCLATDLGYFSEELIKNLKDADGILMESNHDVEMLKFGPYPYS 179 Query: 216 ---------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S + I I N K +L H+ +Y + T Sbjct: 180 LKRRILSNIGHLSNDDCGNAILDILNGNTKKVMLGHLSNTNNYPELAYQT 229 >gi|332181102|gb|AEE16790.1| metallo-beta-lactamase family protein [Treponema brennaborense DSM 12168] Length = 313 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 82/256 (32%), Gaps = 51/256 (19%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTV-----------IVDTGPDFYMQVLREQVLSID 77 + ++ + R +SL +S G NT ++D G + + D Sbjct: 38 ESSDARERFL-ASLPVSLYGTVGGNTACVELTDAAGTVCLLDCGTGVRE-YSKHGSPAAD 95 Query: 78 ---AVLYTHPHADHIHGIDGLRGYF---LKQKRPIDVYAAPDCMKHLFES---FRYCFKA 128 ++ +H H DHI G+ +F +++ + Y+ LF Y F Sbjct: 96 NTYHIVLSHFHWDHIQGL----PFFDQAYQRQCSLHFYSPFPAAPALFAKQMQLPY-FPV 150 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 D ++ + I+ + G + H +S + F Y Sbjct: 151 QFDTSFHSSITFHTIKTKE-----PFRIGNSTVVSKKMSHPG-NSYAYSFTEDGKKFIYA 204 Query: 185 TDVN------AFPAESLEKLQNLDFLIIDALK------NGLHSSHFSLSESLKKIELINP 232 TDV AE+ + + +++DA + H + ++ N Sbjct: 205 TDVELSADDFEVTAENAAFFSDAEAIVLDAQYTVEEALYKANWGHSAFCYAVDFAVKWNI 264 Query: 233 KNAILTHMHVDLDYDM 248 K L H + YD Sbjct: 265 KKLYL--FHHEPAYDD 278 >gi|166007339|pdb|3BK1|A Chain A, Crystal Structure Analysis Of Rnase J gi|166007340|pdb|3BK2|A Chain A, Crystal Structure Analysis Of The Rnase JUMP COMPLEX Length = 562 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 20/193 (10%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF---ES 121 + L E I A + TH H DHI G+ L ++ P+ +Y A + L E Sbjct: 64 RVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPXIFGKESPVPIYGARLTLGLLRGKLEE 123 Query: 122 F---RYCFKALDDRT--YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F F + + ++ + GV+ PI G I G Sbjct: 124 FGLRPGAFNLKEISPDDRIQVGRYFTLDLFRXTHSIPDNSGVVIRTPI----GTIVHTGD 179 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL---KNGLHSSHFSLSESLKKIELINP 232 F+ V+ + + + LI DA + G S +++ L ++ P Sbjct: 180 FKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGYTPSEXEIAKELDRVIGRAP 239 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 240 GRVFVTTFASHIH 252 >gi|312967571|ref|ZP_07781786.1| ribonuclease Z [Escherichia coli 2362-75] gi|312287768|gb|EFR15673.1| ribonuclease Z [Escherichia coli 2362-75] Length = 305 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 102 ETALR---ISGSWTDYP-------LEIVEIGAGEIFDDGLRKVTAYPMEH-PLECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|225850541|ref|YP_002730775.1| metal dependent phosphohydrolase [Persephonella marina EX-H1] gi|225644986|gb|ACO03172.1| metal dependent phosphohydrolase [Persephonella marina EX-H1] Length = 254 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 5/130 (3%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAA 111 N TV +D G + L+E + I + TH H DHI I L K+++P+ +YA Sbjct: 29 NDTVCIDAGNII--EPLKEDIFKISHIFLTHSHFDHISDIPFLLDLTYSKREKPLYLYAL 86 Query: 112 PDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 D + L E F + P ++ ++ + I +H Sbjct: 87 KDTINTLKEDLFNQSIWPDFSKIKLPQTGEPALQFIEISYYEEYTVDGIRVKTFPSEH-T 145 Query: 171 ISSLGFRFGN 180 + + GF + Sbjct: 146 VPTSGFIIND 155 >gi|164687837|ref|ZP_02211865.1| hypothetical protein CLOBAR_01481 [Clostridium bartlettii DSM 16795] gi|164603112|gb|EDQ96577.1| hypothetical protein CLOBAR_01481 [Clostridium bartlettii DSM 16795] Length = 305 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 95/332 (28%), Gaps = 104/332 (31%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LGCG VP R SSL I+ +++D G + Sbjct: 4 LTLLGCG--GNVPMPN--------------RFLSSLFINYKG-----RKMLIDCGEGTQI 42 Query: 67 QVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESF 122 + + +ID +L TH H DHI G+ GL + + + + + + Sbjct: 43 AMKKYNCGFKAIDLILITHLHGDHIIGLIGLLQTMGNSGKTDDLTIVGPVGIIDAM-NAI 101 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPILQQHGRISSLGF----- 176 + + L R Y VIEN ++ IE I +H +G+ Sbjct: 102 KVLVEYLPYRVY-------VIENPKEKFSLEHDILKDIEISTIDLEHST-ECIGYSLYFK 153 Query: 177 ---RFGN-------------------------------------------VAYCTDVN-- 188 +F +++ TD Sbjct: 154 RKAKFDRQKAMSNEIPQILWKKLQEQDTVIYNDKTYYSSMVLGDERKGIKLSFITDTRPT 213 Query: 189 -AFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 P + D I + + + + H + E+ N +LTH Sbjct: 214 FEIPQ----FIYGSDLFICEGMYGDDLDISKAVKNKHMTFREAASLANAGNVDKLLLTHF 269 Query: 241 HVDL----DYDMVLKSTPSRVVPAFDGMQFSS 268 + D+ + + DG+ S Sbjct: 270 SPSIEEPKDFAHNATNLFKDTIIGEDGLSLSL 301 >gi|119469052|ref|ZP_01612036.1| metal-dependent hydrolase [Alteromonadales bacterium TW-7] gi|119447304|gb|EAW28572.1| metal-dependent hydrolase [Alteromonadales bacterium TW-7] Length = 277 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 30/187 (16%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA----APDCMKHLFESFRYCFKALDDRTY 134 +L TH H DHI G + + R I + A + + + + + Sbjct: 63 ILLTHNHWDHIQGFPFFKPIYQAN-RDITIVAGDVEDKGSQHAILKQMSGSYFPVRHQDL 121 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR----ISSLGFRFGNVAYCTDVNAF 190 P + + + G I P+ G + + G VAY TD Sbjct: 122 PSNITLNTELSAQSQFNLN--GFSISTAPLNHPGGGTAYCLIADG---AKVAYVTDNELN 176 Query: 191 PAES--------LEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAI 236 P + ++ D LI DA L H ++ + + KN + Sbjct: 177 PPQQTKTSISEWAAFIEGADLLIHDAQLIDADLPLKHGWGHSTIDQVAQLAIKAKVKNMV 236 Query: 237 LTHMHVD 243 + + D Sbjct: 237 I--ISHD 241 >gi|317502955|ref|ZP_07961045.1| ribonuclease Z [Prevotella salivae DSM 15606] gi|315665921|gb|EFV05498.1| ribonuclease Z [Prevotella salivae DSM 15606] Length = 304 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L P + +S ++ V E ++D G Sbjct: 4 FRVHILGCGSAL--PTLNHH---------------ASSQVVEVRE----KLFMIDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ + ++ + AV +H H DH G+ G+ F R P+ VYA L Sbjct: 43 QLQLRKNRIRFTKLQAVFISHLHGDHCFGLIGMISTFGMLGRTAPLHVYAHEALEPILKS 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ ++ + + +E IP+ RI + G+ F Sbjct: 103 QMEFFCNGLEFEVV-----FHSVDTLKHAVIYEDRSITVETIPLQH---RIPTCGYLF 152 >gi|75674889|ref|YP_317310.1| pyrroloquinoline quinone biosynthesis protein PqqB [Nitrobacter winogradskyi Nb-255] gi|74419759|gb|ABA03958.1| Coenzyme PQQ biosynthesis protein B [Nitrobacter winogradskyi Nb-255] Length = 299 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 88/311 (28%), Gaps = 63/311 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRR--TRSSLKISRVSERGSNTTVIVDTGP 62 F +LG A G+P+ C R T+SSL +S + P Sbjct: 1 MRFVVLGAAAGGGLPQWNCGCRNCAMARSSGLRPQTQSSLAVSLGGLNWAILN----ASP 56 Query: 63 DFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPI----- 106 D Q+ L I +V+ T+ DHI G+ LR + + I Sbjct: 57 DIRQQINDNTQLHPRGPRDTPIMSVVLTNGDLDHIVGLLTLRERQPFQIFLTGAIAGILD 116 Query: 107 --DVY--AAPDCMKHLF----ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 V+ P+ ++ +SF P + +E+ D I +S Sbjct: 117 SNPVFRVLDPNTVQRNLVVPNKSFPLLPGLDASLFAVPGKVALFMEDEDATIGAESE--- 173 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID----------- 207 + G + + Y +++ D + D Sbjct: 174 -HVTGVALSAGGLRAF--------YIPGCAHLTESLATRIRGADIVFFDGTLFTDDEMIR 224 Query: 208 ---ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKS----TPSRV 257 K G H +S SLK + ++ + H++ Sbjct: 225 TRTGTKTGRRMGHMPISGEGGSLKVLARLDIGRIVYIHINNTNPIWRDGPERDLVLRHGF 284 Query: 258 VPAFDGMQFSS 268 DG + S Sbjct: 285 EVGCDGAEISL 295 >gi|84996717|ref|XP_953080.1| hypothetical protein [Theileria annulata strain Ankara] gi|65304076|emb|CAI76455.1| hypothetical protein, conserved [Theileria annulata] Length = 661 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 50/200 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G S VP + R SS+ + + N ++++D G Sbjct: 406 KLLFLGTGCS--VPSV--------------YRNVSSILL----QLHKNYSILMDCGEGTL 445 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHGIDGLRG----YFLKQKRPIDVYAAP 112 +Q+ ++LSI + +H HADH G+ L Y +PI + + Sbjct: 446 LQIYYISNSFTDFINKLLSIRIIFISHNHADHHLGLYQLISLHNKYNSNYWKPI-IISTQ 504 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 L E ++ + Y +I + I + I +H I Sbjct: 505 HIQYWLKE-----YENISKLKY-----ESIILTEETHIYYTIYNKPLNIILFPVEH-IID 553 Query: 173 SLGFRF-----GNVAYCTDV 187 S G + G++ Y D Sbjct: 554 SYGIKIIYEELGSLVYSGDT 573 >gi|313159180|gb|EFR58553.1| putative ribonuclease Z [Alistipes sp. HGB5] Length = 307 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 33/179 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG P R S+ ++ + +VD G Sbjct: 2 SFSVTILGS----------------SSAKPTLSRHPSAQAVNVHEQ-----YYLVDAGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF 119 Q++R + + AV +H H DH+ G+ L +K P+ V+A + L Sbjct: 41 VQQQLIRCGINPLKLRAVFISHLHGDHVFGLFPLISTLALYGRKTPLRVFAPAPFGEILA 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 C D P V ++ + +++ + +IP+ R+ + GF F Sbjct: 101 -----CHLRFFDSELPYPVVWTEVDTTKHALLLENRTLEVWSIPLRH---RVPTAGFLF 151 >gi|302518994|ref|ZP_07271336.1| ribonuclease Z [Streptomyces sp. SPB78] gi|302427889|gb|EFK99704.1| ribonuclease Z [Streptomyces sp. SPB78] Length = 301 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 69/247 (27%), Gaps = 65/247 (26%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R + D G Q+ + ++ V TH H DH G+ G+ + P Sbjct: 28 RWDGEAFLFDPGEGTQRQMTHAGIFATALHRVCVTHFHGDHSLGLAGVIQRINLDRVPHP 87 Query: 108 VYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA P + F RY +Y V + ++ + + + G +E + Sbjct: 88 VYAHYPASGEEYFRRLRYA------TSYYESVGITPVPVHEEGVLVTTPGYTLETRRLSH 141 Query: 167 QHGRISSLGFRF----------------------------------------------GN 180 + S G+R Sbjct: 142 P---VESFGYRLTEPDGVRMLPEALAAHGIEGPDVGRLRRAGELRGVRLEEVSEVRRGQR 198 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKN 234 A+ D + E + D L+I++ H + ++ ++ Sbjct: 199 FAFVMDT-RMCRGAEELAEGCDLLVIESTFADEAAALAEEHGHLTAGQAAALARDAGVRH 257 Query: 235 AILTHMH 241 +LTH Sbjct: 258 LVLTHFS 264 >gi|148554157|ref|YP_001261739.1| beta-lactamase superfamily hydrolase [Sphingomonas wittichii RW1] gi|148499347|gb|ABQ67601.1| Metal-dependent hydrolase of the beta-lactamase superfamily I-like protein [Sphingomonas wittichii RW1] Length = 320 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 81/260 (31%), Gaps = 48/260 (18%) Query: 49 ERGSNTTVIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 E G + ++ D G + +H H DHI G F Sbjct: 69 EGGDGSFIVCDMGTGLREFGIDAFRRCAAGHERTYHFFMSHLHWDHIGGFPFFGPAFDPN 128 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIE 160 R + D + L ++ ++P + + IE + G ++ Sbjct: 129 ARIVIHSGHADAEQALRR-------QQEEISFPVAFDWLRATIEFRTLAPGETYRIGGLD 181 Query: 161 AIPILQQHGRISSLGFRFGNVAYCT-----------DVNAFPAESLEKLQNLDFLIID-- 207 + Q H S G+RF + A T D A+ ++ D +I D Sbjct: 182 VEVMEQHHSH-KSYGYRFTDDAGKTAIFSTDSEHKIDSMEGEADVAHFFRDADLVICDTM 240 Query: 208 -----ALKNGLHSSHFSLSESLKKIELINPKNAILTH------------MHVD-LDYDMV 249 A+ H S ++ K L H MH + + Y+ + Sbjct: 241 YSLADAVSMKEDWGHSSNIVAIDLCHEAEAKRLALFHHEPIYSDDDIQRMHQESIRYEEL 300 Query: 250 -LKSTPSRVVPAFDGMQFSS 268 + TP V+ A+DG++ Sbjct: 301 TRRETPLEVLCAYDGLEVRL 320 >gi|88798000|ref|ZP_01113587.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Reinekea sp. MED297] gi|88779197|gb|EAR10385.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Reinekea sp. MED297] Length = 256 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 18/193 (9%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 R +SL + + N +V++D GP ++L I+ V +TH H DH G+ L Sbjct: 31 RHNASLLLRKA-----NQSVLIDCGPWVTKRLLALIGPEEINEVYFTHAHPDHCLGLTTL 85 Query: 96 RGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + ++++P+ ++ + E ++ +P + IE D+ + Sbjct: 86 TNWMSSNRRQQPLLIHC-------IAEQKPLLQTLVNFGCWPEREHTFNIEWRDIEPFGE 138 Query: 154 SAGGVIE--AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 AG E A + + +V Y D AE D + I+ + Sbjct: 139 LAGYDYETAATKHSVDNRSLHLTLDENRSVFYSGDGK-LTAEGAALAAQSDVVFIECEQV 197 Query: 212 GLHSSHFSLSESL 224 SH SL E Sbjct: 198 RPCRSHNSLEEVF 210 >gi|226358100|ref|YP_002787839.1| ribonuclease Z [Deinococcus deserti VCD115] gi|226319743|gb|ACO47737.1| putative ribonuclease Z [Deinococcus deserti VCD115] Length = 383 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 3/130 (2%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKR 104 +++D G + + ++D +L++H H DH+ G D + R Sbjct: 19 TADSGQGRKRLLLDCGAGTLTALPFAEFQAVDHLLFSHLHMDHVGGFDDFFRATFDRAGR 78 Query: 105 PIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIV-NPIVIENNDVPICMKSAGGVIEAI 162 V+ P + L F Y + + +V + E A V+ Sbjct: 79 ENHVWGPPGTAQILSHRFQGYWWNFAPELRGTWLVHDVSAEEVQSFRFEAHEAFAVMHCA 138 Query: 163 PILQQHGRIS 172 G I Sbjct: 139 GTRGHQGTII 148 >gi|312868316|ref|ZP_07728516.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] gi|311096061|gb|EFQ54305.1| metallo-beta-lactamase domain protein [Streptococcus parasanguinis F0405] Length = 269 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 82/246 (33%), Gaps = 53/246 (21%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHIHG+ L +K + Sbjct: 25 PKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVG-----VLARKYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + + Y V+ + + + G I+ Sbjct: 80 DLYANEATWKAM-----------EGTKYLGKVD--DAQKHIFEMGKTKTFGDIDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +RF + TD + + D +LI ++ L+ G ++ Sbjct: 127 SHDAAAPQFYRFMKNGKSFVMLTDTGYVSDRLAGIVADADGYLIESNHDVEILRAGSYAW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST-PSR 256 H S + + I + K L H+ +L + + + Sbjct: 187 RLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMENQLARAD 246 Query: 257 VVPAFD 262 + D Sbjct: 247 LAVGHD 252 >gi|225571649|ref|ZP_03780645.1| hypothetical protein CLOHYLEM_07747 [Clostridium hylemonae DSM 15053] gi|225159726|gb|EEG72345.1| hypothetical protein CLOHYLEM_07747 [Clostridium hylemonae DSM 15053] Length = 301 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 81/307 (26%), Gaps = 113/307 (36%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P R ++L + + ++V++D G + Sbjct: 6 LLGTGGMMPLP----------------YRWLTALMVRY-----NGSSVLIDCGEGTQI-A 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGI----------DGLRGYFLKQKRPIDVYAAPDCM 115 ++E+ ID + +TH H DHI G+ D L I + Sbjct: 44 IKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTL-----IGPKGLERVV 98 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + +P IE + + G ++A H + G Sbjct: 99 NALR-------VIAPELPFP----VKYIEITEPEQTFEMNGYRLKA--FRVNH-NVLCYG 144 Query: 176 F-----RFGNV----------------------------------------------AYC 184 + R G YC Sbjct: 145 YTLEVDRAGKFDVDRAGAAGIPQRYWGILQNGENVEDNGTVYTPDMVLGPPRKGIKLTYC 204 Query: 185 TDVNAFPAESLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAIL 237 TD +E D I D LK H + E+ + + K L Sbjct: 205 TDTRP-TESIVENAAGSDLFICEGMYGEKDKLKKAKEYKHMTFYEAARLAKEAEVKEMWL 263 Query: 238 THMHVDL 244 TH L Sbjct: 264 THYSPSL 270 >gi|88857023|ref|ZP_01131666.1| metallo-beta-lactamase family protein [Pseudoalteromonas tunicata D2] gi|88820220|gb|EAR30032.1| metallo-beta-lactamase family protein [Pseudoalteromonas tunicata D2] Length = 317 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 95/336 (28%), Gaps = 100/336 (29%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG + P+ +N + + V + T ++VD G Sbjct: 1 MQIHFLGTSS-------GC------PSLSRN------VAATAVEFEHTKTWLLVDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+++ + + +L TH H DH +G+ GL R P+ + A ++ + Sbjct: 42 QHQIMKSPLAAYHLGVILITHLHGDHCYGLPGLLASISMAGRKEPVHLVAPKKVIEFVEA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + L + + E D ++ + ++ P+ R+ +GF+ Sbjct: 102 TL-----ELTEMETAFSLIFTAWETLDNQQVLEFSSCLVTIHPLQH---RVPCVGFKIIE 153 Query: 179 -----------------------------------------GNVAY----------CTDV 187 + Y C D Sbjct: 154 KGVPNKLRIDELNAAGIGSGPHYNQLQRGQDVIYNHQLLKSADFTYPSWQPRKVLICGD- 212 Query: 188 NAFPAESLEKLQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 N P+ Q++D L+ D L+ G H+ H + E L H Sbjct: 213 NEKPSLLASVCQDVDLLVHEATFTSADLLRVGEHTGHSDAKRVAQFAEQCKIPKLALIHF 272 Query: 241 H---VDLD-----YDMVLKSTPSRVVPAFDGMQFSS 268 + +++ A DG+ S Sbjct: 273 SSRYHGPGMLEPLAQEAQQYYHGQLILAEDGLTLSI 308 >gi|325860146|ref|ZP_08173272.1| putative ribonuclease Z [Prevotella denticola CRIS 18C-A] gi|325482431|gb|EGC85438.1| putative ribonuclease Z [Prevotella denticola CRIS 18C-A] Length = 312 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L P + SS + ++D G Sbjct: 8 FKVRILGCGSAL----------------PTLQHFPSSQVVEL-----REKLFMIDCGEGT 46 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ LR I AV +H H DH G+ G+ F R P+ +YA L + Sbjct: 47 QIQLRRLRIHFSKIIAVFISHLHGDHCFGLPGMLSTFGMTGRTAPLHIYAPAAFGPLLCQ 106 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + L ++ + + +E IP+ RI G+ F Sbjct: 107 TLEFFCQGLGFEVV-----FHAVDTTRNKVVYEDRSLTVETIPLQH---RIECCGYLF 156 >gi|123976456|ref|XP_001330849.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] gi|121896958|gb|EAY02094.1| metallo-beta-lactamase superfamily protein [Trichomonas vaginalis G3] Length = 407 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 88/260 (33%), Gaps = 61/260 (23%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLK-ISRVSERGSNTTVIVDTG 61 + + T LG GA R SS++ ++ + + + +D G Sbjct: 140 ETFGVTFLGTGA----------------------RQPSSMRNVTGLMLHTKSGVIAIDPG 177 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYAAP 112 D+Y Q+ R + + I V TH H DH G+ L K I V A Sbjct: 178 EDYYGQLCRKYGKTVTEQLLKEIKMVFVTHIHGDHTFGVHKLLSERSKLTNEEIIVQADQ 237 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR-- 170 + L Y V N + V+ +IP+ G Sbjct: 238 ILIDELKY-------------YEKYQKFYVNYVNRDTTTVTVGNNVVTSIPVNHCPGSHA 284 Query: 171 --ISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLS 221 + G +RF ++ D N E ++ + D L+ +A + + H ++ Sbjct: 285 ILVEIDGKYRF---SFTGDKNQ-EDEYVKTVGKCDLLVHEATYDEDKADKAKEVCHSTVK 340 Query: 222 ESLKKIELINPKNAILTHMH 241 +++ + + K LTH+ Sbjct: 341 QAIAVGKELGAK-TCLTHIS 359 >gi|22536885|ref|NP_687736.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76788653|ref|YP_329469.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76798189|ref|ZP_00780440.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77406414|ref|ZP_00783473.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|22533735|gb|AAM99608.1|AE014224_11 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76563710|gb|ABA46294.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76586452|gb|EAO62959.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77174978|gb|EAO77788.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 269 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 52/236 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +L E + +DA+L TH H+DHI G+ L +K + Sbjct: 25 PQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVG-----VLARKYHL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA K + E + V + + G ++ Sbjct: 80 DIYANEQTWKVMDERNM-------------LGKVDVSQKHVFGRGKTLTFGDLDIESFGV 126 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H + +R + TD ++N D +LI I+ L++G + Sbjct: 127 SHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAGLIENADGYLIESNHDIEILRSGSYPW 186 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMH-----VDLDYDMVLKST 253 H S + S I I K+ L H+ +L + + + Sbjct: 187 TLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMENNL 242 >gi|215487486|ref|YP_002329917.1| ribonuclease Z [Escherichia coli O127:H6 str. E2348/69] gi|254808629|sp|B7UFT1|RNZ_ECO27 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|215265558|emb|CAS09961.1| binuclear zinc phosphodiesterase [Escherichia coli O127:H6 str. E2348/69] gi|320196140|gb|EFW70764.1| Ribonuclease Z [Escherichia coli WV_060327] gi|323188002|gb|EFZ73297.1| ribonuclease Z [Escherichia coli RN587/1] Length = 305 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 102 ETALR---ISGSWTDYP-------LEIVEIGAGEIFDDGLRKVTAYPMEH-PLECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|297160573|gb|ADI10285.1| ribonuclease Z [Streptomyces bingchenggensis BCW-1] Length = 306 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 92/326 (28%), Gaps = 80/326 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKH 117 G Q++R V I+ + TH H DH G+ G+ + P V A P + Sbjct: 39 GEGTQRQMVRAGVAAHDINRICVTHFHGDHSLGLAGVVQRINLDRVPHPVTAHYPASGQR 98 Query: 118 LFESFRYCFKALD-----------DRTYPPIVNPIVIENNDVPICMKSAGGVIE------ 160 FE RY + + +E + ++S G + Sbjct: 99 FFERLRYATAYRETVQLAEAPVAGEGGVLARTAGYTLEARRLSHPVESYGYRLTEPDGRR 158 Query: 161 --------------AIPILQQHGRISSLGF-----------RFGNVAYCTDVNAFPAESL 195 I LQ+ G + G R A+ D + Sbjct: 159 MLPERLAAHGIRGPEIGRLQREGALEREGHTVTLEEVSEARRGQRFAFVMDT-RLCEGAH 217 Query: 196 EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV------D 243 + Q D L+I++ + H + ++ + ++ +LTH D Sbjct: 218 DLAQGCDLLVIESTFLDEDEPLAVEYGHLTAGQAARLAAEAGVRHLVLTHFSQRYGDPTD 277 Query: 244 LDYDMVLKSTPSRVVPAFDGMQFSSP 269 + + A D M + P Sbjct: 278 FERQARAAGFEGELTVAQDLMSVALP 303 >gi|257076086|ref|ZP_05570447.1| metal dependent hydrolase [Ferroplasma acidarmanus fer1] Length = 252 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 31/223 (13%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D GP +L + ID +L +H H DH G+ + Sbjct: 18 RNVSIII--------DGHIVLDCGPHTIESMLENGIDPAKIDKMLISHMHLDHYGGLAEI 69 Query: 96 RGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 Y K + + K+ E + D+ + N + I NN +K Sbjct: 70 LWYRGARNVKDELTIMGPKGIRKN-TEKILQIYNTPDNYMFSVKPNYVEINNNGEVYEIK 128 Query: 154 SAGGVI----EAIPILQQH---GRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI 205 + H + L +R +AY D +++ L +N D L+ Sbjct: 129 TEFIDKSENDYIEAFSGNHIIPDNMYRLEYRGNTIAYTGDTAY--NDNIPLLGENADILL 186 Query: 206 -------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 DA + H + S ++K + K + H+ Sbjct: 187 HEMTYTDKDA-EIAKFWKHSTYSSAIKGFGESHAKKLVPVHLT 228 >gi|300780981|ref|ZP_07090835.1| metallo-beta-lactamase superfamily protein [Corynebacterium genitalium ATCC 33030] gi|300532688|gb|EFK53749.1| metallo-beta-lactamase superfamily protein [Corynebacterium genitalium ATCC 33030] Length = 707 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 74/218 (33%), Gaps = 47/218 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + ++ +DA++ TH H DHI I + Sbjct: 172 CGVLFPSSDEPGVDL-ILPDFGP------IENKLDKVDALVVTHGHEDHIGAI----PWL 220 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I +Y+A + K + R P + ++V + G Sbjct: 221 LKLRPDIPIYSARFTNALIAA------KTREHRQKPKL--------HEVNEKSEITAGPF 266 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H LG G V D+ PA + + +D Sbjct: 267 NLRFWRVGHSIPDCLGVVIKTGAGTVCMTGDIKLDMTPYDNKPTDLPALARYGDEGIDLF 326 Query: 205 IID---ALKNGLHSSHFSLSESLKKIELI-NPK-NAIL 237 + D A G+ SS + E+L I L+ K +L Sbjct: 327 LCDSTNATIPGISSSEAGIEETL--IRLVQGAKQRVVL 362 >gi|260912260|ref|ZP_05918811.1| ribonuclease Z [Prevotella sp. oral taxon 472 str. F0295] gi|260633561|gb|EEX51700.1| ribonuclease Z [Prevotella sp. oral taxon 472 str. F0295] Length = 304 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N +S + ++D G +Q+ Sbjct: 8 ILGCGSAL-------------PTLKHNA---TSQVVDIRG-----KLFMIDCGEGTQVQL 46 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH G+ G+ F R + VYA + L + Sbjct: 47 RRSRIRFTKIGAVFISHLHGDHCFGLIGMISTFGLLGRTAALHVYAPAELGPLLRTQLDF 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ I+ + + +E+IP+ RI GF F Sbjct: 107 FCGGIEFEVV-----FHAIDTTVQQVIYEDKSLTVESIPLEH---RIDCCGFLF 152 >gi|322419411|ref|YP_004198634.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320125798|gb|ADW13358.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 257 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 49/219 (22%) Query: 55 TVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G + R ++D ++ TH H DHI G+ L ++ + V Sbjct: 23 RLLIDAGLSGRETITRLCSIGVDAATLDGIMVTHEHTDHIRGVG-----TLARRLKVPVL 77 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + I + P K A P H Sbjct: 78 GSSRMLAA-------------ASHVIGKAELIEFDAGS-PFVFKGASID----PFPITHD 119 Query: 170 RISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSSHFS 219 +GFR G + + TD+ + EKL+ L+++ L++G + H Sbjct: 120 ACDPVGFRIESAEGCIGFATDLGIATRLTREKLKGCRALVLEFNHDEQMLQDGPYPWH-- 177 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV 258 + I ++ H+ +++ + + + Sbjct: 178 ------LKQRIRSRHG---HLSNSEGANLLEELLHANLQ 207 >gi|254171825|ref|ZP_04878501.1| metal dependent hydrolase [Thermococcus sp. AM4] gi|214033721|gb|EEB74547.1| metal dependent hydrolase [Thermococcus sp. AM4] Length = 271 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 32/211 (15%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 V VD GP ++ R ++ +DA+ +H H DH ++V Sbjct: 32 RNVYVDPGPGALVRSWRYKLDPRRLDAIFVSHRHVDHC--------------NDLEVMVE 77 Query: 112 PDCMKHLFESF----RYCFKALDDRTYPPIVNPIV--IENNDVPIC-MKSAGGVIEAIPI 164 L + D+ P I + +E+ P K A G E + Sbjct: 78 AMTGGALKKRGVLIASKSVVYGDETHTPAISKYHIEVLESVHTPEPGNKIAIGEEEFLIT 137 Query: 165 LQQHGRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHF 218 QH +++GFR +G+++Y D F +E LI + H Sbjct: 138 PSQHSDPTTIGFRMKTAYGDISYIPDTAYF-DGLIEWHDGARVLIAAITRPRDMGIPYHL 196 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDLDYD 247 S ++++ ++ + P+ I++H+ + + + Sbjct: 197 STDDAVEMLKSMEKKPEVLIMSHIGMKMHFA 227 >gi|325925006|ref|ZP_08186429.1| putative hydrolase of the metallo-beta-lactamase superfamily [Xanthomonas perforans 91-118] gi|325544590|gb|EGD15950.1| putative hydrolase of the metallo-beta-lactamase superfamily [Xanthomonas perforans 91-118] Length = 249 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|1722990|sp|P50474|Y1173_MYCLE RecName: Full=Uncharacterized protein ML1173 gi|466916|gb|AAA50891.1| ats [Mycobacterium leprae] Length = 284 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 50/254 (19%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LGC S + D A S + R + +++D G Sbjct: 26 TVRITVLGCSGS----VVGPDSPA-------------SGYLLRAPDTPP---LVLDFGGG 65 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-DV-----YAAPDCMKH 117 + R VL +H HADH + GL + ++ P V Y D Sbjct: 66 VLGALQRHADPGSVHVLLSHLHADHCLDMPGL--FVWRRYHPTRPVGKALLYGPDDTWLR 123 Query: 118 LFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L Y ++ + + G + +P L H S G Sbjct: 124 L---------GAASSPYGGEIDDCSDIFDVRHWVDGEPVPLGALMIMPRLVAHPT-ESYG 173 Query: 176 FRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKK 226 R + + Y D + + +E + D + +A + + H S +E+ + Sbjct: 174 LRITDPSGASLVYSGDTGSC-DQLVELARGADVFLCEASWTHSPDRPPNLHLSGTEAGRA 232 Query: 227 IELINPKNAILTHM 240 + + +LTH+ Sbjct: 233 AAQASVRELLLTHI 246 >gi|325963802|ref|YP_004241708.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] gi|323469889|gb|ADX73574.1| metal-dependent hydrolase, beta-lactamase superfamily III [Arthrobacter phenanthrenivorans Sphe3] Length = 265 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 53/192 (27%), Gaps = 32/192 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P +S + ++ V++D G Sbjct: 1 MKLTIVGCTGS--FPGPGS---------------PASCYLLTANDGERTWKVVMDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHL 118 + R + IDA+ TH H DH + GL + I V+ + Sbjct: 44 LGAIQRYTDLEDIDAIFLTHLHPDHCMDLCGLHVAIRWKPGGWGRGRIPVWGPAATADRM 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ LD + E V + G P H + R Sbjct: 104 ATAYG---LPLDSGMHEEFDFTNWTEREPVTV------GPFTVTPFGVNHPIEEAYALRV 154 Query: 179 GNVAYCTDVNAF 190 V D N Sbjct: 155 EVVEPDKDGNTI 166 >gi|251782687|ref|YP_002996990.1| ribonuclease Z [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391317|dbj|BAH81776.1| ribonuclease Z [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127507|gb|ADX24804.1| ribonuclease Z [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 309 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 89/295 (30%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + +++ +D+Y Sbjct: 43 QRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLDIYGPVGIKTYV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F DD++ I+ +E Sbjct: 103 LTSLKMSGSRLPYTIHFHEFDDKSLGKIMETDKFVVYAERLAHTIFCMGYRVVQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIP--------ILQQHGRISSLGFRFGN------VAYCTDVNAFPA 192 +K+AG + + + GR+ + D + Sbjct: 163 LDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITIIGDTRK-TS 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S++ ++ D L+ ++ + + H + ++ + K +L H+ Sbjct: 222 ASVKLAKDADVLVHESTYGKGDERIARNHGHSTNMQAAQIAHEAGAKRLLLNHVS 276 >gi|241888865|ref|ZP_04776171.1| metallo-beta-lactamase family protein [Gemella haemolysans ATCC 10379] gi|241864541|gb|EER68917.1| metallo-beta-lactamase family protein [Gemella haemolysans ATCC 10379] Length = 209 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 11/137 (8%) Query: 52 SNTTVIVDTGPDF-YMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 VIVD G F +Q + E + I+A+L TH H DHI +D R + + VY Sbjct: 24 DGRGVIVDPGEGFDRIQKAVEELNVKIEAILLTHAHFDHIMSLDECR-----KHYEVPVY 78 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L ++ + L PP+ +P E + + AG +P Sbjct: 79 ISGYERDWL-QNPDFNGSTLFRLRRPPMTDPAEFEF-EENKKYEIAGLSFTVLPTPGHSP 136 Query: 170 RISSLGFRFGNVAYCTD 186 S F FG D Sbjct: 137 GGVS--FDFGKFIVVGD 151 >gi|15595100|ref|NP_212889.1| ribonuclease Z [Borrelia burgdorferi B31] gi|218249811|ref|YP_002375254.1| ribonuclease Z [Borrelia burgdorferi ZS7] gi|226321453|ref|ZP_03796980.1| ribonuclease Z [Borrelia burgdorferi Bol26] gi|41017521|sp|O51696|RNZ_BORBU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808614|sp|B7J0K1|RNZ_BORBZ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|2688688|gb|AAC67098.1| conserved hypothetical protein [Borrelia burgdorferi B31] gi|218164999|gb|ACK75060.1| ribonuclease Z [Borrelia burgdorferi ZS7] gi|226233249|gb|EEH32001.1| ribonuclease Z [Borrelia burgdorferi Bol26] Length = 319 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 99/334 (29%), Gaps = 95/334 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYDGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADH-----------------------IHGIDGLRGYF 99 M + ++++ I + TH HADH I G G++ Y Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKNYT 101 Query: 100 LKQKRPIDVYAA-------------------------PDC-MKHLFESFRYCFKALDDRT 133 + +Y +KH E Y F D Sbjct: 102 QANINMLKIYKNYEIIYKEIIIDKTEKIIYEDKTKKIEYTKLKHSIECVGYLFIEKDK-- 159 Query: 134 YPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P N E ++P G I + + I + VAY TD Sbjct: 160 -PGKFNTEKAEELNIPKGPIRKALQDGKEILVNGKIIKPSEILGKSKKGLKVAYITDTGY 218 Query: 190 FPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH-- 241 F E +++++N + +II++ LK H + + ++ L H Sbjct: 219 F-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGGAANIVKQAKVLQTGLIHFSER 277 Query: 242 ----VDLDYDMVLKST--PSR-VVPAFDGMQFSS 268 DL+ + P + DGM+ + Sbjct: 278 YTLRKDLENLLKEAKLEHPDGEIFLTRDGMRLEA 311 >gi|309781245|ref|ZP_07675982.1| metallo-beta-lactamase superfamily protein [Ralstonia sp. 5_7_47FAA] gi|308920066|gb|EFP65726.1| metallo-beta-lactamase superfamily protein [Ralstonia sp. 5_7_47FAA] Length = 261 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLR 96 + + + T +++D G V R + S++A+L TH H+DH+ Sbjct: 16 ALLVESASGATCTRILLDCGFGIRETVRRLERLGCTPESLNAILVTHEHSDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--- 153 Y + K I V+ + Y N + V C Sbjct: 71 AYAVAAKFDIPVWTSHGT-------------------YRATENLRGADRAAVRFCRADDM 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G ++ +P H L F F + + TD L + L+++ Sbjct: 112 FCVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTDAGMLTEYLCAHLAGMHALVLEC 170 >gi|289661641|ref|ZP_06483222.1| hypothetical protein XcampvN_00695 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667850|ref|ZP_06488925.1| hypothetical protein XcampmN_04921 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 249 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAQYGKLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVED 197 >gi|291286794|ref|YP_003503610.1| hypothetical protein Dacet_0875 [Denitrovibrio acetiphilus DSM 12809] gi|290883954|gb|ADD67654.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM 12809] Length = 269 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 68/219 (31%), Gaps = 38/219 (17%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC----MKHLFESFRYCFKALDDRT 133 + +H H DHI G+ + + + I +Y L F+ F + Sbjct: 59 HIFLSHLHWDHIVGMPVFKAF-YNSSKRIHIYLENKVEMESTDILDVLFKPPFFPVPKSK 117 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR---ISSLGFRFGNVAYCTDVNAF 190 + ++++ D + G I H + + F + + +D Sbjct: 118 LMGDIRIHLVDSGD-----QFRFGAISVHAANGNHPDGVLMHKIIFPDKKILFTSDFEHG 172 Query: 191 PAES---LEKLQNLDFLIIDALKNGL-------HSS-----HFSLSESLKKIELINPKNA 235 + +E + D+LI D H S H + + + N Sbjct: 173 TEKDDFLIEFARGCDYLIFDTTYTPEEYAGKCGHMSKVGWGHSTFRHGIDFAKKAGVDNL 232 Query: 236 ILTHMHVDLDYDMVL--------KSTPSRVVPAFDGMQF 266 IL H + +Y+ ++ + A+DGM Sbjct: 233 IL--FHHNPEYNDIMLDEIGIRARREFKNSFVAYDGMII 269 >gi|218690432|ref|YP_002398644.1| ribonuclease Z [Escherichia coli ED1a] gi|254808633|sp|B7MXV1|RNZ_ECO81 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|218427996|emb|CAR08917.2| binuclear zinc phosphodiesterase [Escherichia coli ED1a] gi|324006621|gb|EGB75840.1| ribonuclease Z [Escherichia coli MS 57-2] Length = 305 Score = 56.3 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 1 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 41 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHL 118 Q+L +D + +H H DH+ G+ GL +P+ +Y + + Sbjct: 42 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFV 101 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + YP +E ++ G+ + +H + G+R Sbjct: 102 ETALR---ISGSWTDYP-------LEIVEIGAGEIFDDGLRKVTAYPMEH-PLECYGYRI 150 Query: 179 G 179 Sbjct: 151 E 151 >gi|311070580|ref|YP_003975503.1| putative hydrolase [Bacillus atrophaeus 1942] gi|310871097|gb|ADP34572.1| putative hydrolase [Bacillus atrophaeus 1942] Length = 264 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 74/231 (32%), Gaps = 51/231 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +VD G Q+ R + +D + TH H+DHI G+ + +K Sbjct: 22 DDHAFLVDAGLSGKAMDGLMAQIGR-NMDDLDGIFVTHEHSDHIKGLG-----VVARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA K + K + + + P+ + G ++ Sbjct: 76 LPVYANEKTWKAMEN---QIGKLDNGQKFV------------FPMETVKSFGGLDVESFG 120 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H + + F +A TD +++ + + + L+ G + Sbjct: 121 VSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSANAFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELINPK--NAILTHMHVDLDYDMVLKS 252 H S + +L ++I + L H+ D + + + Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARM 231 >gi|239816407|ref|YP_002945317.1| beta-lactamase domain protein [Variovorax paradoxus S110] gi|239802984|gb|ACS20051.1| beta-lactamase domain protein [Variovorax paradoxus S110] Length = 258 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 50/216 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLR---EQV--LSIDAVLYTHPHADHIHGIDGLR 96 + S G + ++VD G +R + IDAV TH H DHI L Sbjct: 16 ALVESTSG-GRTSRLLVDCGFGLRQLDIRLAKAGLEAGDIDAVFITHEHGDHIGCAHSLS 74 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 ++ I V+ + + +N + + A Sbjct: 75 -----RRSRIPVWMSEGTWLATGAR-----------DFEGRLNLARDDA-------EFAV 111 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID----- 207 G I P H L R + + TD+ A L +L + L+++ Sbjct: 112 GDIAVRPFTVPHDAREPLQLRCSDGARTLGVLTDLGHATAHVLARLSGVHALLLEFNHDS 171 Query: 208 ------------ALKNGLHSSHFSLSESLKKIELIN 231 L+ G H S + + + Sbjct: 172 ELLANSAYPAFLKLRVGGRHGHLSNDAAAEIARAVR 207 >gi|118586934|ref|ZP_01544367.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] gi|118432661|gb|EAV39394.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] Length = 325 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 54/185 (29%), Gaps = 40/185 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER N + D G Sbjct: 1 MELEFLGTGAGQ----------------PSKQRNVTSIALRLLDER--NEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYF----LKQKRPID--VYAAPD 113 Q+L+ + + TH H DHI G+ G R + + +P D +Y Sbjct: 43 QHQLLKSNTRSRKVTKIFITHMHGDHIFGLPGFLTSRNFQGSELIDGGKPTDVTIYGPAG 102 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + Y F L + I V + HG I Sbjct: 103 LQQ-------YVFSVL---RAAQVRLQYRINFIQVRPGIIFEDQQFAVSAFPMNHG-IED 151 Query: 174 LGFRF 178 +R Sbjct: 152 YAYRV 156 >gi|58580681|ref|YP_199697.1| hypothetical protein XOO1058 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622615|ref|YP_449987.1| hypothetical protein XOO_0958 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710943|ref|ZP_02242150.1| hypothetical protein Xoryp_05605 [Xanthomonas oryzae pv. oryzicola BLS256] gi|58425275|gb|AAW74312.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366555|dbj|BAE67713.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 249 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 197 >gi|93006544|ref|YP_580981.1| beta-lactamase-like [Psychrobacter cryohalolentis K5] gi|92394222|gb|ABE75497.1| RNAse Z [Psychrobacter cryohalolentis K5] Length = 373 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 28/105 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT--------- 55 T LG S GVP +R ++L I ++ S T Sbjct: 2 LKLTFLGT--SAGVPT--------------KQRNVTALAIECINPYSSGTNQQQNKKSRP 45 Query: 56 -VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG 97 +++D G Q+L ++ + A+ TH H DH +G+ GL Sbjct: 46 WLLIDCGEGTQHQLLHTKLSLHQLQAICITHVHGDHCYGLPGLLA 90 >gi|116671128|ref|YP_832061.1| hypothetical protein Arth_2582 [Arthrobacter sp. FB24] gi|116611237|gb|ABK03961.1| conserved hypothetical protein [Arthrobacter sp. FB24] Length = 265 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 51/184 (27%), Gaps = 38/184 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P +S + + +++D G Sbjct: 1 MKLTIVGCTGS--FPGPGS---------------PASCYLLTAHDGERTWKIVMDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL-----KQKRPIDVYAAPDCMKHL 118 + R + IDA+ TH H DH + GL + I V+ + Sbjct: 44 LGAIQRYTDLEDIDAIFLTHLHPDHCMDLCGLHVAVRWKPGGWGRDRIPVWGPAATADRM 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK---SAGGVIEAIPILQQHGRISSLG 175 + Y ++P + E D + + G P H + Sbjct: 104 ATA------------YGLELDPGMHEEFDFTNWTERQSVSVGPYTVTPFAVNHPVEEAYA 151 Query: 176 FRFG 179 R Sbjct: 152 LRVE 155 >gi|313625274|gb|EFR95103.1| metallo-beta-lactamase family protein [Listeria innocua FSL J1-023] Length = 105 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 40/128 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFR 123 K + Sbjct: 98 KAMDNMIG 105 >gi|313620812|gb|EFR92040.1| metallo-beta-lactamase family protein [Listeria innocua FSL S4-378] Length = 146 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 40/128 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFR 123 K + Sbjct: 98 KAMDNMIG 105 >gi|313611037|gb|EFR85925.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL F2-208] Length = 149 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 40/128 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFR 123 K + Sbjct: 98 KAMDNMIG 105 >gi|255026052|ref|ZP_05298038.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL J2-003] Length = 119 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 40/128 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D F+IL G+S ++ + ++ +++D G Sbjct: 12 TDQIRFSILASGSSG-----------------------NATLVETGDQK-----ILIDCG 43 Query: 62 ------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + QV R + +DA+L TH H+DHI G+ L +K + +YA Sbjct: 44 LSGKKMEGLFAQVGR-DMNDLDAILITHEHSDHIKGLG-----VLARKYKLPIYANAKTW 97 Query: 116 KHLFESFR 123 K + Sbjct: 98 KAMDNMIG 105 >gi|227549068|ref|ZP_03979117.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] gi|227078850|gb|EEI16813.1| possible metal-dependent hydrolase [Corynebacterium lipophiloflavum DSM 44291] Length = 584 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 60/183 (32%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + V+ D GP + ++ I+A++ TH H DHI I + Sbjct: 50 CGVLFPNSGEPGVDL-VLPDFGP------IENKLDKIEALIVTHGHEDHIGAI----PWL 98 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + + +Y++ + K + R P + NDV + G Sbjct: 99 LKLRADVPIYSSRFTNALIAA------KTKEHRQRPKL--------NDVTKDSELNLGPF 144 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H LG G+V D+ PA S + +D Sbjct: 145 RIRFWHVGHSIPECLGVSIKTGAGHVVMTGDIKLDQTPYDGQPTDLPALSRFGDEGIDLF 204 Query: 205 IID 207 + D Sbjct: 205 MCD 207 >gi|257437856|ref|ZP_05613611.1| ribonuclease Z [Faecalibacterium prausnitzii A2-165] gi|257199516|gb|EEU97800.1| ribonuclease Z [Faecalibacterium prausnitzii A2-165] Length = 312 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 97/333 (29%), Gaps = 102/333 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG A++ +P +R ++ ++ D G Sbjct: 2 LTITLLGTAATMPLP---------------DRAL-TAALAEC-----GGHALLFDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 R V +DA+ TH H DHI G+ GL ++RP+ +Y + L E Sbjct: 41 QAAARRAGVNLMKLDAICLTHYHGDHIFGLPGLLQTLGCQGRERPLTLYGP----EGLGE 96 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV--IEAIPILQQHGRISSLGFRF 178 + YP V + ++ + + + S+G + P +H R+ S G+R Sbjct: 97 VWPALRTLAGPLPYP--VRAVQLDTDPIDLTTLSSGWPAGAQLTPFRTRH-RVPSRGYRL 153 Query: 179 G----------------------------------------------------NVAYCTD 186 + D Sbjct: 154 DLPRAGRFDPAKARALNVPVPAWKLLQRGQSIPLENGAVVSPADVLGPARRGLRFVFSGD 213 Query: 187 VNAFPAESLEKLQNLDFLIIDALKNG-------LHSSHFSLSESLKKIELINPKNAILTH 239 PA + QN D + DA H + ++ + + + L Sbjct: 214 TAPCPALE-QAAQNADLFLCDATYPDNEQEAQAKQWGHSTFAQGAAIAKKADVRRFWL-- 270 Query: 240 MHVDLDYDMVLKSTPS--RVVPA----FDGMQF 266 MH + P+ V PA FDG Q Sbjct: 271 MHYSPMILEPEAALPNAQAVFPAAECGFDGKQI 303 >gi|46202479|ref|ZP_00208532.1| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 276 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 94/282 (33%), Gaps = 61/282 (21%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS---------IDAVLYTHPHAD 87 RT+SSL +S R V+++ PD Q+ VL I A + T+ D Sbjct: 6 RTQSSLAVSADGLRW----VLLNASPDLAAQIKANPVLHPPVGGRGSPIVAAVVTNADVD 61 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIEN 145 HI G+ L++ ++A + L + F A R + P I + Sbjct: 62 HIAGL-----LTLRECHRFAIHATRRVVGVLGANAIFNVVNPAFAPRIAVSLEEPTAIRD 116 Query: 146 ND--------VPICMKSAGGVIEAIPILQQHGRIS--SLGFRF-----GNVAYCTDVNAF 190 D + + P G + ++G Y + Sbjct: 117 ADGIATGLSVTAFAVPGKIALWLEDPDAPNFGSVPEDTVGLEISDGECNRFFYLPGCASL 176 Query: 191 PAESLEKLQNLDFLIIDA--------LKNGLHSS------HFSL---SESLKKIELINPK 233 P E E+L+ D ++ D ++ G + H ++ ++ L++ K Sbjct: 177 PPELAERLRGADLVVFDGTTWTDDEMIRKGFSNKTASRMGHMAMSGEDGTIAAFALLDVK 236 Query: 234 NAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQFSS 268 + H++ ++L +P FDGM+ + Sbjct: 237 RRVFVHINNTNP--VLLADSPERQAAEEAGWDIGFDGMEITL 276 >gi|296111867|ref|YP_003622249.1| metal-dependent hydrolase of the beta-lactamase superfamily III(putative) [Leuconostoc kimchii IMSNU 11154] gi|295833399|gb|ADG41280.1| metal-dependent hydrolase of the beta-lactamase superfamily III(putative) [Leuconostoc kimchii IMSNU 11154] Length = 314 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 35/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + +H H DHI G+ G R + K P+ +Y +++ Sbjct: 43 QHQILKTTIRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGADKNEPLTIYGPKGVKEYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + R PIV + E + I +H RI + G+R Sbjct: 103 QT----ALRISETRLSYPIVYAELKEG------VIFEDKTFRVIGAKMRH-RIETWGYRV 151 Query: 179 G 179 Sbjct: 152 E 152 >gi|297743234|emb|CBI36101.3| unnamed protein product [Vitis vinifera] Length = 841 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 87/314 (27%), Gaps = 95/314 (30%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ +LG G+S P R +S+ I+ S ++++D G Sbjct: 485 REDMEIVLLGTGSSQ----------------PSKYRNVTSIYINLFS----KGSLLLDCG 524 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV----- 108 Q+ R V + + +H HADH G+ + + + Sbjct: 525 EGTLGQLKRRFSVEGADNAVRGLRCIWISHIHADHHAGLARILTLRRDLLKGVPHEPLLV 584 Query: 109 --------YAAPDC-MKHLFESFRYCFKALD----------------------------- 130 Y ++ L F C + Sbjct: 585 IGPRQLKRYLDAYQKLEDLDMQFLDCRHTTEVSLNAFENTVELMNQNIDSSLFAKGSRMQ 644 Query: 131 ---DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG------------RISSLG 175 R P+ + + + G+ I H RI+S+G Sbjct: 645 SYWKRPGSPVDHSVAFPILKNLKKVLCEAGLEALISFPVVHCPQAFGVVLKASERINSVG 704 Query: 176 FRFG--NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKI 227 + Y D P +E + LI +A + + +H + +E+++ Sbjct: 705 KVIPGWKIVYSGDTRPCPEL-IEAARGATVLIHEATFEEGMVDEAIARNHSTTNEAIEVG 763 Query: 228 ELINPKNAILTHMH 241 ILTH Sbjct: 764 NSAGAYRIILTHFS 777 >gi|149182649|ref|ZP_01861117.1| hypothetical protein BSG1_09593 [Bacillus sp. SG-1] gi|148849618|gb|EDL63800.1| hypothetical protein BSG1_09593 [Bacillus sp. SG-1] Length = 260 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 35/213 (16%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL------RGYFLKQKRPID 107 +++D G + L+E + +DA + +H H DH I L + Y K + Sbjct: 47 LLIDCGSGV-LSFLQEHIEAYELDAAILSHYHPDHTADIGVLQHALLIQKYLGKNSNTLP 105 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 YA + D + + + ++ G + + Sbjct: 106 FYAHEE----------------DKQGFASLTYKDLMRGTAYNPSEVLHIGPYTISFLKTK 149 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFS 219 H + R + Y D +A+ + ++ D + + G + H + Sbjct: 150 H-PVPCYAMRIEAGGKTLVYTAD-SAYQDSFISFAKDADIFLCECNFYGDMDGSGAGHMN 207 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 +S + + K +LTH+ D + +++ Sbjct: 208 SLDSGRVAKAAGVKKLVLTHLPHYGDLNKLVQE 240 >gi|15674944|ref|NP_269118.1| ribonuclease Z [Streptococcus pyogenes M1 GAS] gi|21910173|ref|NP_664441.1| ribonuclease Z [Streptococcus pyogenes MGAS315] gi|28896127|ref|NP_802477.1| ribonuclease Z [Streptococcus pyogenes SSI-1] gi|71910538|ref|YP_282088.1| ribonuclease Z [Streptococcus pyogenes MGAS5005] gi|94988413|ref|YP_596514.1| ribonuclease Z [Streptococcus pyogenes MGAS9429] gi|94992294|ref|YP_600393.1| ribonuclease Z [Streptococcus pyogenes MGAS2096] gi|306827483|ref|ZP_07460766.1| ribonuclease Z [Streptococcus pyogenes ATCC 10782] gi|41017528|sp|P60198|RNZ_STRP3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41017529|sp|P60199|RNZ_STRP1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991505|sp|Q1JC59|RNZ_STRPB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991506|sp|Q1JM42|RNZ_STRPC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|13622088|gb|AAK33839.1| conserved hypothetical proteins [Streptococcus pyogenes M1 GAS] gi|21904366|gb|AAM79244.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28811377|dbj|BAC64310.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] gi|71853320|gb|AAZ51343.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94541921|gb|ABF31970.1| ribonuclease Z [Streptococcus pyogenes MGAS9429] gi|94545802|gb|ABF35849.1| Ribonuclease Z [Streptococcus pyogenes MGAS2096] gi|304430281|gb|EFM33307.1| ribonuclease Z [Streptococcus pyogenes ATCC 10782] Length = 309 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 88/295 (29%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLALKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + +++ +D+Y Sbjct: 43 QRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGPIGIKTYV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNPIVIE------------------NNDVPIC 151 + L Y F DD++ I+ E D+ Sbjct: 103 LTSLKVSGARVPYQIHFHEFDDKSLGKIMETDKFEVYAERLAHTIFCMGYRVVQKDLEGT 162 Query: 152 MKSAGGVIEAIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 + + +P G+I G Y + D + Sbjct: 163 LDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITIIGDTRK-TS 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S++ ++ D L+ ++ + + H + ++ + K +L H+ Sbjct: 222 ASVKLAKDADVLVHESTYGKGDERIARNHGHSTNMQAAQIAHEAGAKRLLLNHVS 276 >gi|94985707|ref|YP_605071.1| ribonuclease Z [Deinococcus geothermalis DSM 11300] gi|94555988|gb|ABF45902.1| ribonuclease Z [Deinococcus geothermalis DSM 11300] Length = 331 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQKRPIDVYA 110 T +++D D + ++ +ID +L++H H DH+ G D R F + RP ++ Sbjct: 25 GQTRLLLDCDEDTLDGLPLAELQAIDHLLFSHLHMDHVAGFDRFFRANFDRTTRPNHIWG 84 Query: 111 APDCMKHLFESFRYC 125 P + L+ F+ C Sbjct: 85 PPGTARILWHRFQGC 99 >gi|168217792|ref|ZP_02643417.1| ribonuclease Z [Clostridium perfringens NCTC 8239] gi|182380141|gb|EDT77620.1| ribonuclease Z [Clostridium perfringens NCTC 8239] Length = 316 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 86/309 (27%), Gaps = 95/309 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T+LG G G+P NR +S V +++D G Sbjct: 2 LNVTLLGTG--GGMPMP-------------NR------FLSSVVMNFKGRKILLDCGEGT 40 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-----AAPDCMKH 117 + + SID + +H H DHI+G+ GL R ++Y + ++ Sbjct: 41 QVSMRVNGTGFKSIDIICISHLHGDHIYGLPGLLSTIGNSGRVEEIYIIGPKGIKEVIEG 100 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-GVIEAIPILQQHGRISSLGF 176 + Y L+ + +V + + + + + H LG+ Sbjct: 101 FLITLPYLPYKLNILEDASNLEFMVKKEKMELVELNEKISSDLSIKTLELDHSS-PCLGY 159 Query: 177 RFG---------------------------------------------------NVAYCT 185 F ++Y T Sbjct: 160 SFNIRRGRKFNVEKALMNKVPKEVWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTT 219 Query: 186 DVN---AFPAESLEKLQNLDFLIID---ALKNGLHS----SHFSLSESLKKIELINPKNA 235 D P ++ D I + + +H H + E+ + + K Sbjct: 220 DTRPTEDIPD----FIKESDLYICEGTYGSEEDMHKAIKNKHMTFKEAANLSKKGHVKEL 275 Query: 236 ILTHMHVDL 244 +LTH + Sbjct: 276 LLTHFSPSI 284 >gi|284990941|ref|YP_003409495.1| pyrroloquinoline quinone biosynthesis protein PqqB [Geodermatophilus obscurus DSM 43160] gi|284064186|gb|ADB75124.1| pyrroloquinoline quinone biosynthesis protein PqqB [Geodermatophilus obscurus DSM 43160] Length = 300 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 102/311 (32%), Gaps = 66/311 (21%) Query: 9 ILGCGASLGVPRITGDWGACDP----TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C + P RT+SS+ +S R +++ PD Sbjct: 5 VLGSAAGGGYPQWNCACPPCRAVRDGSRPARPRTQSSIAVSADRRRW----FLLNASPDI 60 Query: 65 YMQVLR------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 Q+ +V+ + AVL T DH G+ LR A Sbjct: 61 RAQIESFPALHPASGPDGARVVPLQAVLLTDAELDHTLGLLLLREGGGLVLH-----ATE 115 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 L + + L+ Y P+ V+ DVP+ + + + R Sbjct: 116 ATHDTLRQGTS-LLRTLE--AYCPVEWRPVVPGVDVPLADGLSYRAFDVPTTKRARFRSG 172 Query: 173 S-----LGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIID-------------- 207 S +G+R + + + + E +L L++D Sbjct: 173 SREGRVVGYRLTDERSGRALVHLPVLQELTPEVRNELDGC-CLLVDGTCWSDDELIRLGL 231 Query: 208 ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RV 257 A + H +S SL+++ + + I H++ ++L+ P + Sbjct: 232 AGRTAREMGHLPISGPGGSLEQLARLPVERRIYVHVNNTNP--ILLEDAPERRTVEEHGM 289 Query: 258 VPAFDGMQFSS 268 A DG++ Sbjct: 290 EVAVDGLELEV 300 >gi|153955761|ref|YP_001396526.1| hydrolase [Clostridium kluyveri DSM 555] gi|219856128|ref|YP_002473250.1| hypothetical protein CKR_2785 [Clostridium kluyveri NBRC 12016] gi|146348619|gb|EDK35155.1| Predicted hydrolase [Clostridium kluyveri DSM 555] gi|219569852|dbj|BAH07836.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 274 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 39/202 (19%) Query: 53 NTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++DTG +Y++ + +V I+ ++ TH H DH GI + K R Sbjct: 47 GKCYLIDTGAKYYIKKVIKYLDLNKVNKIEGIVLTHYHRDHYDGIIKIIQ-CKKVGR--- 102 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY S +Y + + I +E +KS G +EA+ L + Sbjct: 103 VYLPGH-----ENSMKYIIRNRLIKMG------IHVEYIGEGWRLKSQGINLEAVVPLHK 151 Query: 168 HGRIS-----SLGFRFGNVAYC--TDVNAFPAESL---EKLQNLDFLIIDALKNGLHSSH 217 I L G + Y D ES+ KL+ D L K H H Sbjct: 152 DNNIENNNSIVLQGNVGQLTYLFAGDCEKAEEESMINSGKLKKCDVL-----KVPHHGIH 206 Query: 218 -FSLSESLKKIELINPKNAILT 238 +L E ++ INPK A++T Sbjct: 207 TSTLDE---FLKRINPKVAVIT 225 >gi|114565896|ref|YP_753050.1| beta-lactamase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336831|gb|ABI67679.1| beta-lactamase-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 275 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 66/219 (30%), Gaps = 28/219 (12%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + I+D G + Q+L+ Q + +H H DHI G F+K Sbjct: 32 SCVQVQIGQRLFIMDAGTGIHHLGQQLLKSQSQISGEIFISHTHWDHIQGFPFFAPAFIK 91 Query: 102 QKRPIDVYAAPDC----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 R + +Y + Y + + +++ G Sbjct: 92 GNRFV-LYGQSKVNSTFADLMRGQMTYQHFPVSLGEMGASIEFHELDSGSK----LDLGE 146 Query: 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDV---NAFPAESLEKLQNLDFLIIDA-- 208 I + H SL +R + Y TD + + D +I D+ Sbjct: 147 QIRLRTVHTNHPN-GSLAYRLDYDGRSCCYITDTEHYSCVDPRLKAFCEETDLMIYDSNY 205 Query: 209 ----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 L H + E +K + K +L H D Sbjct: 206 TDEEYPRFLGYGHSTWQEGIKLAQAAGAKKLVL--FHHD 242 >gi|302551331|ref|ZP_07303673.1| ribonuclease Z [Streptomyces viridochromogenes DSM 40736] gi|302468949|gb|EFL32042.1| ribonuclease Z [Streptomyces viridochromogenes DSM 40736] Length = 301 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 89/329 (27%), Gaps = 91/329 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V ++ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHCLGLAGVIQRINLDKVPHEITAHYPRSGQR 98 Query: 93 --DGLRGYFLKQK---------------RPIDVY-AAPDCMKHLFESFRYCFKALDDRT- 133 D LR ++ DVY + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVDITQAPVAADAPLARTDVYTLEARKLSHPVESYGYRIIEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P + I+ DV I + + G + + S R A+ D Sbjct: 159 LPERLAAHGIKGPDVGRIQREGSLGAVSLDDV--------SEARRGQRFAFVMDT-RLCD 209 Query: 193 ESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHV---- 242 + D L+I++ H + ++ + ++ +LTH Sbjct: 210 GVYALAEGCDMLVIESTFLDEDEELAVEHGHLTAGQAGRVARDGGVRHLVLTHFSQRYTD 269 Query: 243 --DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 + + + A D ++ P Sbjct: 270 PDEFERQARAAGYEGELTVAHDLLRVPVP 298 >gi|196231345|ref|ZP_03130204.1| ribonuclease Z [Chthoniobacter flavus Ellin428] gi|196224681|gb|EDY19192.1| ribonuclease Z [Chthoniobacter flavus Ellin428] Length = 335 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG-LRGYFL 100 + ++ + ++ D G V V +ID + ++H H DH+ G D R F Sbjct: 16 ALLVQIDSGQTIERLLFDCGEGCLSDVPFADVQAIDHLFFSHLHMDHVSGFDSFFRCTFN 75 Query: 101 KQKRPIDVYAAPDCMKHLFESF 122 + +P ++ P+ + L F Sbjct: 76 RPTKPNRIWGPPETARILQHRF 97 >gi|116872328|ref|YP_849109.1| metal-dependent beta-lactamase superfamily III protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741206|emb|CAK20328.1| metal-dependent beta-lactamase superfamily III protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 243 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 72/217 (33%), Gaps = 36/217 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRP-- 105 +++D G + IDA + +H H DH+ + +R ++ +P Sbjct: 27 DGFKLLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHIRLLSQREDKPPV 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y + D+R Y + V + + G + + Sbjct: 87 LPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDTLEIGPFKITFLK 130 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------S 215 H + R Y D +A+ + D L+ D N H Sbjct: 131 TIH-PVPCYAMRIEAGEKVFVYTAD-SAYQDSFIPFADKADLLVTDT--NFFHDLAGKTK 186 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + +E K + N K+ +L+H+ D +++ + Sbjct: 187 VHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|306831089|ref|ZP_07464250.1| ribonuclease Z [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977984|ref|YP_004287700.1| ribonuclease Z [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|304426655|gb|EFM29766.1| ribonuclease Z [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177912|emb|CBZ47956.1| ribonuclease Z [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 309 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + N + D G Sbjct: 1 MELQFLGTG-----------------AGQPSKSRNVSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAPDCMKHL 118 Q+L + + + TH H DHI G+ G R + ++ +DVY ++ Sbjct: 43 QRQILETTIKPRKVKRIFITHLHGDHIFGLPGFLASRAFQANEEQTDLDVYGPIGIRSYI 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R L P ++ + N + M++ V+ A + I +G+R Sbjct: 103 LNSLR-----LSGARLPYRIHFHEFDENSLGKVMETDKFVVYAEKLDH---TIFCIGYRV 154 >gi|168705191|ref|ZP_02737468.1| beta-lactamase-like protein [Gemmata obscuriglobus UQM 2246] Length = 310 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 68/234 (29%), Gaps = 59/234 (25%) Query: 52 SNTTVIVDTGPDFYMQVLREQV-----LSIDAVLYTHPHADHIHGIDGLRGYFLK--QKR 104 +++D G R + + AV+ TH H DH + L + R Sbjct: 22 DGFGLLIDCGLQPRHLTARFRSVGTSWERVSAVVLTHTHTDH------WKDATLAELRAR 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +YA P ++ + ++ + ++ A G + +P+ Sbjct: 76 RIPMYAHPQHYAYMERA----------SSFASFRAAGLAREYGDGRPLELAPG-LRCLPV 124 Query: 165 LQQHGRISSLGFRFGN-----------VAYCTDVNAFPAESLEKLQNLDFLII----DAL 209 H + FR V Y +D+ E + +D L + D L Sbjct: 125 RVSHDSAPTYAFRIDGYDGERPEPAWAVGYASDLGCGSPELVAAFTGVDVLALEYNHDEL 184 Query: 210 KNGLHS-------------SHFSLSESLKKIELIN-------PKNAILTHMHVD 243 H S ++ + I P + + H+ D Sbjct: 185 MERASPRPKFLVDRVLSDLGHLSNKQAAELTATIAGRSGEGFPGHLVQLHLSKD 238 >gi|163788759|ref|ZP_02183204.1| ribonuclease Z [Flavobacteriales bacterium ALC-1] gi|159875996|gb|EDP70055.1| ribonuclease Z [Flavobacteriales bacterium ALC-1] Length = 301 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ +S + N ++D G Sbjct: 1 MKLTILG----------------CHSATPRTNTNPTSQVLEI-----KNHMFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFE 120 +++ R ++ I + +H H DH G+ GL F L ++ + +YA + + Sbjct: 40 QVELRRNKIKFSRIKHIFISHLHGDHYFGLVGLINTFSLLTRESELHIYAPKGLKEVITL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + YP I + + + +++ +E I H RI + GF F Sbjct: 100 QMK---LSKGWTNYPLIFHELTSKTSEIIYEDD----KVEVYTIPLNH-RIYTNGFLFK 150 >gi|187928082|ref|YP_001898569.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12J] gi|187724972|gb|ACD26137.1| beta-lactamase domain protein [Ralstonia pickettii 12J] Length = 261 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLR 96 + + + T +++D G V R + S++A+L TH H+DH+ Sbjct: 16 ALLVESASGATCTRILLDCGFGIRETVRRLERLGCTPESLNAILVTHEHSDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--- 153 Y + K I V+ + Y N + V C Sbjct: 71 AYAVAAKFNIPVWTSHGT-------------------YRATENLRGADRAAVRFCRADDM 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G ++ +P H L F F + + TD L + L+++ Sbjct: 112 FSVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTDAGMLTEYLCAHLAGMHALVLEC 170 >gi|15894233|ref|NP_347582.1| ComE-like protein [Clostridium acetobutylicum ATCC 824] gi|15023849|gb|AAK78922.1|AE007610_2 ComE-like protein, Metallo beta-lactamase superfamily hydrolase, secreted [Clostridium acetobutylicum ATCC 824] Length = 320 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 20/205 (9%) Query: 50 RGSNTTVIVDTGPD----FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++DTG + M L+ V ID ++ THPH DHI G D + F Sbjct: 56 QCGGKNMLIDTGTNESTSNLMSYLKNQNVQKIDYLVLTHPHEDHIGGADEVINNFNIGTI 115 Query: 105 PID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + V K + ++ R NP+V V G I Sbjct: 116 YMPNVATNTQTYKDVIQAMR--------NKGLTATNPVVGSTFKVGSANCIVYGPINTNS 167 Query: 164 ILQQHGRISS-LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 I L + + D + + D L D LK G H SH S S+ Sbjct: 168 ENLNTYSIVIKLTYGNNKFMFTGDAQSSNEPDM-INAGFD-LSADVLKVGHHGSHTSSSQ 225 Query: 223 SLKKIELINPKNAILT-HMHVDLDY 246 + +NPK A+++ + D + Sbjct: 226 --DFLNAVNPKYAVISCGLGNDYGH 248 >gi|77413948|ref|ZP_00790122.1| AtsA/ElaC family protein [Streptococcus agalactiae 515] gi|77159984|gb|EAO71121.1| AtsA/ElaC family protein [Streptococcus agalactiae 515] Length = 258 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 38/216 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHG---IDGL 95 +S ++ +N +++D G ++ +E +DAV+ +H H DH+ + Sbjct: 20 TSFLLTGE----NNFHLLIDAGSRSINELEKEISPLDLDAVIISHYHPDHVADLGVLYHY 75 Query: 96 RGYFLKQK---RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 R + K K + + VY DD + + P V + Sbjct: 76 RLLYPKDKWEPKVLPVYG----------------HNEDDYEFSKLTLPNVAQGIAYHTNG 119 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLII 206 G I H + R + + D F + + D + Sbjct: 120 VEQVGPFNITFIKTVH-PVVCYAMRITERETGQVLVFTGDSGYFADL-VPFTKGADLFLA 177 Query: 207 DALKN---GLHSSHFSLSESLKKIELINPKNAILTH 239 D H +H + E+ + K +LTH Sbjct: 178 DVYLYEGNENHIAHLTSKEAGEIAYNAKVKKLVLTH 213 >gi|116491094|ref|YP_810638.1| beta-lactamase superfamily hydrolase [Oenococcus oeni PSU-1] gi|122276724|sp|Q04EZ9|RNZ_OENOB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116091819|gb|ABJ56973.1| RNAse Z [Oenococcus oeni PSU-1] Length = 325 Score = 56.3 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 54/185 (29%), Gaps = 40/185 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER N + D G Sbjct: 1 MELEFLGTGAGQ----------------PSKQRNVTSIALRLLDER--NEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYF----LKQKRPID--VYAAPD 113 Q+L+ + + TH H DHI G+ G R + + +P D +Y Sbjct: 43 QHQLLKSNTRSRKVTKIFITHMHGDHIFGLPGFLTSRNFQGSELIDGGKPTDVTIYGPAG 102 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + Y F L + I V + HG I Sbjct: 103 LQQ-------YVFSVL---RAAQVRLQYRINFIQVRPGIIFEDQQFAVSAFPMNHG-IED 151 Query: 174 LGFRF 178 +R Sbjct: 152 YAYRV 156 >gi|329770275|ref|ZP_08261663.1| hypothetical protein HMPREF0433_01427 [Gemella sanguinis M325] gi|328836833|gb|EGF86481.1| hypothetical protein HMPREF0433_01427 [Gemella sanguinis M325] Length = 209 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 50/137 (36%), Gaps = 11/137 (8%) Query: 52 SNTTVIVDTGPDF-YMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +IVD G F +Q + E + I+A+L TH H DHI +D R Y+ + VY Sbjct: 24 DGRGLIVDPGEGFERIQKAVEELNVKIEAILLTHAHFDHIMSLDECRKYY-----NVPVY 78 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L + + PI +P E + + AG +P Sbjct: 79 ISGHERDWL-SNPDFNGATSFRLRRAPITDPAEFEF-EENKKYELAGMEFTVLPTPGHSP 136 Query: 170 RISSLGFRFGNVAYCTD 186 S F FG D Sbjct: 137 GGVS--FDFGRFIVVGD 151 >gi|163733702|ref|ZP_02141144.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Roseobacter litoralis Och 149] gi|161392813|gb|EDQ17140.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Roseobacter litoralis Och 149] Length = 387 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 17/177 (9%) Query: 39 RSSLKISRVSERG-SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 R+S+ + + + V G D Y L +DA++ +H H DH+ + Sbjct: 14 RTSVCVQTQGCSVMLDAGIKVGAGDDSYHPRLALSARDLDALVISHAHEDHVGAL----C 69 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + Q +Y + + + + D +P ++ V I + + G Sbjct: 70 WLAAQGYTGPIYMTAETLAETPAALAQYARPDDLAAHP----LASMDIRTVQIGTRFSVG 125 Query: 158 VIEAIPILQQH---GRISSLGFRFGNVAYCTDVNAFPAES---LEKLQNLDFLIIDA 208 + H G + V YC DV P + L D L+IDA Sbjct: 126 PLAIDTGHSGHVAGGMWIAASDTSAKVVYCGDV--VPNSEVFPMTALPQCDLLVIDA 180 >gi|294146917|ref|YP_003559583.1| putative hydrolase [Sphingobium japonicum UT26S] gi|54633218|dbj|BAD66867.1| putative arylsulfatase precursor [Sphingobium japonicum] gi|292677334|dbj|BAI98851.1| putative hydrolase [Sphingobium japonicum UT26S] Length = 326 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 87/258 (33%), Gaps = 53/258 (20%) Query: 52 SNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPID 107 T ++D G Q+ + S+ A+ TH H DH+ + L + L P++ Sbjct: 55 GGQTYLIDAGDGLLRQMAASKLGLGSVKALFLTHHHIDHVADVPVLMIDRWLLANAPPLE 114 Query: 108 VYAAPDCMKHLFESFRYCFKALD------DRTYPPIVNPIVIENNDVPICMKSAGGV--- 158 +Y P + + + F+ ++ P + + +D+P+ + V Sbjct: 115 IYGPPGSAQLVAGTLA-AFRPVELAPVTVGGPVKPPLTGSAV-GHDLPLDLNEPRLVYKD 172 Query: 159 --IEAIPILQQHGRIS----------SLGFRF--GNVAYCTDVNAFPAESLEKL-QNLDF 203 + I H S +R G Y + P+E L+ L ++ D+ Sbjct: 173 DRVRVFAIGVDHYHYPAGSIEARSSRSYAYRVEAGGKVYVFSGDTGPSERLKILAKDADY 232 Query: 204 LIIDA---------LKNGLHSS--------------HFSLSESLKKIELINPKNAILTHM 240 L+ + L++ S H + + + K ILTH Sbjct: 233 LVCEVIDIARMEKLLRSYPGFSADQIPPLMEHMREDHLTGEQIGEIAAAAGVKKVILTHF 292 Query: 241 HVDLDYDMVLKSTPSRVV 258 D + ++S + + Sbjct: 293 APGNDGETDVESYAAGIS 310 >gi|30794976|ref|NP_851426.1| pyrroloquinoline quinone biosynthesis protein PqqB [Streptomyces rochei] gi|30698349|dbj|BAC76462.1| pyrroloquinoline quinone biosynthesis protein B [Streptomyces rochei] Length = 296 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 52/168 (30%), Gaps = 24/168 (14%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG A G P+ C + + + +++ PD Sbjct: 1 MILLGTAAGGGFPQWNCACALC--ARGRRGELPARSQECVAVSGDGRDWWLLNASPDIRT 58 Query: 67 QVLREQV---------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q+L + VL T DH G+ LRG + VYAAP Sbjct: 59 QLLAAPALTPGPGPRDTPVRGVLLTDAEVDHALGLAVLRGATG-----LTVYAAPPVRGA 113 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-VIEAIPI 164 L + L DR Y P + P AGG + A P+ Sbjct: 114 LSAELP--VRGLLDR-YAPWDW----RDATAPGGFAVAGGLTVTAHPV 154 >gi|171184545|ref|YP_001793464.1| beta-lactamase domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170933757|gb|ACB39018.1| beta-lactamase domain protein [Thermoproteus neutrophilus V24Sta] Length = 634 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 20/96 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLRE-QVLSIDAVLYTHPHADHIH 90 RS++ +S + + V++D G DF +L + +DAV+ TH H DH+ Sbjct: 187 RSAILVST-----TESNVLLDCGLKPGQYDEDFP--MLDAVDIDRLDAVVLTHAHMDHVG 239 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDC-MKHLFESFRYC 125 + K VY + Y Sbjct: 240 ----CLPFLYKYGYRGPVYMTDPTKYQAFILLMDYI 271 >gi|89069189|ref|ZP_01156556.1| putative metallo-beta-lactamase superfamily protein [Oceanicola granulosus HTCC2516] gi|89045187|gb|EAR51254.1| putative metallo-beta-lactamase superfamily protein [Oceanicola granulosus HTCC2516] Length = 285 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 81/255 (31%), Gaps = 43/255 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 ++VD G ++ + + + + TH H+DH + L + K +D Sbjct: 32 EGEQIVVDCGLGVSRGLVDQGMQLRDLSLIFITHLHSDHYLELGPLLHTAWTAGLKTRVD 91 Query: 108 VYAAPDCMKH----LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY + L ++D P + + + I D M G + A Sbjct: 92 VYGPAGVDAYWQAFLASMRADIDLRIEDEGRPDLRDLVAIHVMDAGHVMVRNGVAVSA-- 149 Query: 164 ILQQHGRIS---SLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA---------- 208 + +H + +L F+ V + D PA + + D LI +A Sbjct: 150 LRTEHPPLVDTFALSFKTDGVHVVFSGDTAPLPALE-DFARGADLLIHEAMLKSALPALT 208 Query: 209 ---------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD--------YDMVLK 251 L L SH S + + L+H+ D +D V Sbjct: 209 ARVGNGSEKLMQHLLRSHTSAHDVAQTATRAGATRLALSHLIPSDDPSYGPQDWHDAVAG 268 Query: 252 STPSRVVPAFDGMQF 266 ++ DG++ Sbjct: 269 HYDGALIVGHDGLRI 283 >gi|22536582|ref|NP_687433.1| AtsA/ElaC family protein [Streptococcus agalactiae 2603V/R] gi|25010508|ref|NP_734903.1| hypothetical protein gbs0435 [Streptococcus agalactiae NEM316] gi|76788127|ref|YP_329119.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76799060|ref|ZP_00781253.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptococcus agalactiae 18RS21] gi|77412325|ref|ZP_00788638.1| AtsA/ElaC family protein [Streptococcus agalactiae CJB111] gi|22533417|gb|AAM99305.1|AE014209_18 AtsA/ElaC family protein [Streptococcus agalactiae 2603V/R] gi|23094861|emb|CAD46079.1| Unknown [Streptococcus agalactiae NEM316] gi|76563184|gb|ABA45768.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76585597|gb|EAO62162.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Streptococcus agalactiae 18RS21] gi|77161614|gb|EAO72612.1| AtsA/ElaC family protein [Streptococcus agalactiae CJB111] Length = 258 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 38/216 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHG---IDGL 95 +S ++ +N +++D G ++ +E +DAV+ +H H DH+ + Sbjct: 20 TSFLLTGE----NNFHLLIDAGSRSINELEKEISPLDLDAVIISHYHPDHVADLGVLYHY 75 Query: 96 RGYFLKQK---RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 R + K K + + VY DD + + P V + Sbjct: 76 RLLYPKDKWEPKVLPVYG----------------HNEDDYEFSKLTLPNVAQGIAYHTNG 119 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLII 206 G I H + R + + D F + + D + Sbjct: 120 VEQVGPFNITFIKTVH-PVVCYAMRITERETGQVLVFTGDSGYFADL-VPFTKGADLFLA 177 Query: 207 DALKN---GLHSSHFSLSESLKKIELINPKNAILTH 239 D H +H + E+ + K +LTH Sbjct: 178 DVYLYEGNENHIAHLTSKEAGEIAYNAKVKKLVLTH 213 >gi|310765740|gb|ADP10690.1| ribonuclease Z [Erwinia sp. Ejp617] Length = 304 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 92/316 (29%), Gaps = 76/316 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG GA G P R R+ I+ + N + D G Sbjct: 1 MHLQFLGTGA--GTPS----------------RERNVTGIALDLQGVRNNVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP-------- 112 Q+LR + I+ + TH H DHI G+ GL P+ +Y Sbjct: 43 QHQILRTPIKPGRIEKIFITHLHGDHIFGLPGLLTSRSMNGCVEPMTLYGPSGIKTFVET 102 Query: 113 ----------DCMKHLFESFRYCFKALDDR------TYPPIVNPIVIENNDVPICMKSAG 156 ++ + S F+ R T+P I+ +D P + + Sbjct: 103 SLSLSGSWLNFPLEIIEISAGEVFQDAHFRVTAYPLTHPVECYGYRIDEHDKPGALDAQK 162 Query: 157 GVIEAIP-------ILQQHGRISSLGFRFGNVAYCTDVN-----------AFPAESLEKL 198 +P + Q S G Y A A + E Sbjct: 163 LAAHGVPTGPYFYDLKQGRSVTLSDGRIINGWDYVGSTIKGRSLAIFGDTAPTAAATELA 222 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---DYDMV 249 +D ++ +A + H S ++ + + + I+TH+ D + + Sbjct: 223 AGVDVMVHEATLEVAMEEKANARGHSSTVQAARVAQQSGAERLIITHLSSRYLRHDCERL 282 Query: 250 LKSTP---SRVVPAFD 262 L A D Sbjct: 283 LAECRAVFPHTEMAHD 298 >gi|229589005|ref|YP_002871124.1| putative hydrolase [Pseudomonas fluorescens SBW25] gi|229360871|emb|CAY47730.1| putative hydrolase [Pseudomonas fluorescens SBW25] Length = 252 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 54/219 (24%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V+VD G ++LR V + A+L TH HADH+HG+ L ++ + Sbjct: 20 DDTYVLVDCGFSLKETERRLLRLGVHPAQLSAILVTHEHADHVHGVGLLS-----RRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + PI + + + G + I Sbjct: 75 PVYLSRGTLRGMRK---------------PIEPAGFLAGGE-----QLQIGALSIDVIAV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHS- 215 H + F + TD+ ++ A+ L+ +NLD L+I D L G + Sbjct: 115 AHDAQEPTQYVFSDGERRFGVLTDLGSYCAKVLDGYRNLDALMIESNHCRDLLARGHYPY 174 Query: 216 ----------SHFSLSESLKKIELIN---PKNAILTHMH 241 H + ++ + + ++ +L H+ Sbjct: 175 FLKQRVGGELGHLNNHQAAYLVYELGWQDLQHLVLAHLS 213 >gi|149927436|ref|ZP_01915691.1| ribonuclease Z [Limnobacter sp. MED105] gi|149823928|gb|EDM83153.1| ribonuclease Z [Limnobacter sp. MED105] Length = 355 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 61/209 (29%), Gaps = 29/209 (13%) Query: 25 WGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYT 82 G P R +L I + D G Q+ + V T Sbjct: 56 CGTGSPFPDPQRAAPCTLVI------AGKDMFLFDAGSAAAKQIANMNFSTGQLKGVFIT 109 Query: 83 HPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP---P 136 H H+DHI G+ + R + + + V+ L F+ ++A + Sbjct: 110 HLHSDHIDGLGEVLMTRWAQHTEGQRLTVHGPTGVSNVL-NGFKMAYEADNGYRTAHHGA 168 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAI--------PILQQHGRI-SSLGFRF---GNVAYC 184 P + DV G + H I ++G+R G Sbjct: 169 ATMPPELAGADVNEFTVQKGSTTTVLQQPDLLIEAFAVNHQPINPAVGYRIAYKGRTVVL 228 Query: 185 T-DVNAFPAESLEKLQNLDFLIIDALKNG 212 + D + + + D L+ +AL Sbjct: 229 SGDTTS-DEQVKNAARKADLLVHEALSPE 256 >gi|322412011|gb|EFY02919.1| ribonuclease Z [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 309 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + +++ +D+Y ++ Sbjct: 43 QRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLDIYGPVGIKTYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + P I++ + + M++ E H I +G+R Sbjct: 103 LTSLK-----MSGSRLPYIIHFHEFDEKSLGKIMET--DKFEVYAERLAH-TIFCMGYRV 154 >gi|84385491|ref|ZP_00988522.1| Arylsulfatase [Vibrio splendidus 12B01] gi|84379471|gb|EAP96323.1| Arylsulfatase [Vibrio splendidus 12B01] Length = 329 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 34/218 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G Y++ + + +D + TH H DH++ I L GYF ++++ ++ Sbjct: 75 GKSRIMIDAGGGVYLRFGQAGAKLEDLDFMGITHFHTDHVNDIPALLKGGYFFEREKALE 134 Query: 108 VYAAPD--CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV------- 158 + L F F D Y + + P+ + Sbjct: 135 ISGPAAGSAFPSLNGYFAANFD-PDHGAYAYLAGLYDGTDGLFPVNLTDVDYQSTVPTVV 193 Query: 159 -----IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII--- 206 ++ + HG + L +R G + D N L+ + D +++ Sbjct: 194 YEKDGLKITALGIPHGDVPCLAYRIESEEGVMVISADQNGSNPAFLDFARGADIMMMPMA 253 Query: 207 -----DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D + +H+ + E + INPK +L H Sbjct: 254 IHEQADGVSTFMHAKPSVIGE---IAKEINPKMLVLNH 288 >gi|113196160|gb|ABI31434.1| PqqB [Serratia marcescens] Length = 284 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 41/126 (32%), Gaps = 12/126 (9%) Query: 5 YHFTILGCGASLGVPRITGDWGACD--PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C T + RT+SS+ IS + V D P Sbjct: 1 MQIKVLGSAAGGGFPQWNCNCDNCRAFATQHQPTRTQSSIAISTTGKNWVLCNVSPDILP 60 Query: 63 DFYMQVLREQVL-----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 I A++ T DH G+ LR Q V+ P+ Sbjct: 61 STVGLAELNNPDVLLGTGIGAIVLTDSQIDHSAGLLNLREGCPHQ-----VWCTPEVHDD 115 Query: 118 LFESFR 123 L F Sbjct: 116 LSTGFP 121 >gi|240169957|ref|ZP_04748616.1| ribonuclease Z [Mycobacterium kansasii ATCC 12478] Length = 280 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 79/264 (29%), Gaps = 54/264 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P NR ++L R ++D G Sbjct: 2 IEITLLGTGSPIPDP---------------NRAGPATLV------RADGQVFLIDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDG-----LRGYFLKQKRPIDVYAAPDCMKH 117 + + A+L TH H+DHI + F P+ + P + Sbjct: 41 LQRAAAVGVGAAGLSALLITHLHSDHIAELGDVIITNWVTNFAPAAPPLQIIGPPGTAEV 100 Query: 118 LF-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + Y D PP P+ + G I P + Sbjct: 101 VAATLRAFGHDIGYRIAHHADLDAPP---PVEVHEYTEGTVWDREGVTIRVAPTDHR-PV 156 Query: 171 ISSLGFRF--GNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG--LHSS--------- 216 ++GFR G V+ + P SL++L D L+ ++ H Sbjct: 157 APTIGFRIESGGVSVVLAGDTVPCASLDELAAGADALVHTVIRKDILAHVPQQRVKDVCD 216 Query: 217 -HFSLSESLKKIELINPKNAILTH 239 H S+ E+ ++TH Sbjct: 217 YHSSVQEAAATANRAGVGTLVMTH 240 >gi|288905016|ref|YP_003430238.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Streptococcus gallolyticus UCN34] gi|288731742|emb|CBI13303.1| Ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3 endonuclease) [Streptococcus gallolyticus UCN34] Length = 309 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + N + D G Sbjct: 1 MELQFLGTG-----------------AGQPSKSRNVSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAPDCMKHL 118 Q+L + + + TH H DHI G+ G R + ++ +DVY ++ Sbjct: 43 QRQILETTIKPRKVKRIFITHLHGDHIFGLPGFLASRAFQANEEQTDLDVYGPIGIRSYI 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R L P ++ + N + M++ V+ A + I +G+R Sbjct: 103 LNSLR-----LSGVRLPYRIHFHEFDENSLGKVMETDKFVVYAEKLDH---TIFCIGYRV 154 >gi|229824063|ref|ZP_04450132.1| hypothetical protein GCWU000282_01367 [Catonella morbi ATCC 51271] gi|229786417|gb|EEP22531.1| hypothetical protein GCWU000282_01367 [Catonella morbi ATCC 51271] Length = 318 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 81/294 (27%), Gaps = 76/294 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG GA GVP R S ++ + N + D G Sbjct: 2 SMKLLFLGTGA--GVPS---------------RNRNVSALALKLLDE-LNEVWLFDCGEA 43 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + + P+ +Y Sbjct: 44 TQHQILETSLKPRKITKIFITHLHGDHIFGLPGFLSSRSFQGGDQ-PLTLYGPSGIKDFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPP------IVNPIVIENNDVPICMKSAGGVIE-------- 160 L S L+ P + +++ + + S G I Sbjct: 103 ESALRLSKSRLLYPLEIVELSPKGGRLDLGKGWLVDYQALNHGILSFGYRIMEPRTSGEL 162 Query: 161 -------------AIPILQQHGRISSLGF-------------RFGNVA-YCTDVNAFPAE 193 I + G +L R G V D Sbjct: 163 LVDRLASYQIPNGPIFGQLKRGETVTLADGTVLNGQDFLAPAREGRVVTILGDTKTC-DA 221 Query: 194 SLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E Q+ D L+ + + H + ++ + + N K LTH+ Sbjct: 222 IQELAQDADALVHECTFEESEARMAASYHHSTSRQAAQVAQASNVKALYLTHIS 275 >gi|301101429|ref|XP_002899803.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262102805|gb|EEY60857.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 315 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 39/259 (15%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQ----------VLSIDAVLYTHPHADHIHGIDGL 95 R E + +++D G Q+ R V + V +H HADH G+ L Sbjct: 9 RDDEDWAG--LMLDCGEGSLGQLYRYGGGDKRRLQELVDRLKCVWISHNHADHHLGLLRL 66 Query: 96 ---------RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA----LDDRTYPPIVNPIV 142 + P+ + +Y F + + V V Sbjct: 67 LSARASTVEEPLLVIGPTPLQFWLDEYAALDPTVRNKYAFVDNLSFDESDSRSQQVEYHV 126 Query: 143 -IENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRFG-NVAYCTDVNAFPAESLEKLQ 199 V + +E +P+ H L F +A+ D + EK Sbjct: 127 KAARARVWLRETLNISQLECVPVKHAHQSYAVVLTFVNDAKLAFSGDCRP-SEKLAEKAT 185 Query: 200 NLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV---- 249 N ++ +A K +H +++E+++ N ++ +LTH V Sbjct: 186 NAFLMVHEATFEDELTKEAKDKAHCTMAEAIQVGRQANARHLLLTHFSQRYPKTAVLSSS 245 Query: 250 LKSTPSRVVPAFDGMQFSS 268 + V+ A D + Sbjct: 246 SAESAMDVLTAIDMLSLRF 264 >gi|240102664|ref|YP_002958973.1| Metal-dependent hydrolase, beta-lactamase superfamily [Thermococcus gammatolerans EJ3] gi|239910218|gb|ACS33109.1| Metal-dependent hydrolase, beta-lactamase superfamily [Thermococcus gammatolerans EJ3] Length = 271 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 32/211 (15%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 V VD GP ++ R ++ +DA+ +H H DH ++V Sbjct: 32 RNVYVDPGPGALVRSWRYKLDPRRLDAIFVSHRHVDHC--------------NDLEVMVE 77 Query: 112 PDCMKHLFESF----RYCFKALDDRTYPPIVNPIV--IENNDVPIC-MKSAGGVIEAIPI 164 L + D+ P I + +E+ P K A G E + Sbjct: 78 AMTGGALKKRGVLIASKSVVYGDETHTPAISKYHIEVLESVHTPEPGNKIAIGEEEFLIT 137 Query: 165 LQQHGRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHF 218 QH +++GFR +G+++Y D F +E LI + H Sbjct: 138 PSQHSDPTTIGFRMKTAYGDISYIPDTAYF-DGLVEWHDGARVLIAAITRPRDMGIPYHL 196 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDLDYD 247 S ++++ ++ + P+ I++H+ + + + Sbjct: 197 STDDAVEMLKSMEKKPEVLIMSHIGMKMHFA 227 >gi|225420463|ref|ZP_03762766.1| hypothetical protein CLOSTASPAR_06808 [Clostridium asparagiforme DSM 15981] gi|225040894|gb|EEG51140.1| hypothetical protein CLOSTASPAR_06808 [Clostridium asparagiforme DSM 15981] Length = 101 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 10/73 (13%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++VD G + +Q + +D +L TH H+DHI G+ L +K + Sbjct: 28 DKTHILVDAGISNKRIQQGLNDIGLKGGDVDGILITHEHSDHIKGLG-----VLARKYQV 82 Query: 107 DVYAAPDCMKHLF 119 +YA + + + Sbjct: 83 PIYATRETLDEIR 95 >gi|299769381|ref|YP_003731407.1| Ribonuclease Z [Acinetobacter sp. DR1] gi|298699469|gb|ADI90034.1| Ribonuclease Z [Acinetobacter sp. DR1] Length = 324 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP +T S V + +++D G Sbjct: 2 LHFTFLGT--SSGVPTLT---------------RNVSGL--AVRNSKNKDWILIDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRVQQARLSLQNLVAICITHIHGDHCYGL 72 >gi|227821634|ref|YP_002825604.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] gi|227340633|gb|ACP24851.1| metal dependent hydrolase [Sinorhizobium fredii NGR234] Length = 555 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 58/216 (26%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 GS ++VD G F + L E+ ++ A++ TH H DH ++ Sbjct: 28 GSPGSRQWIMVDCGVTFPGPELPGVELVLPDISFLAEERRNLKAIIITHAHEDHYGALND 87 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L + VYA+P L + + ++PI + Sbjct: 88 LWP-----GLNVPVYASPFTAGMLEAK-----RDFEKSR------------GEIPITIFK 125 Query: 155 AGGVIEAIPIL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL------- 198 AG I P H + G V + D SL + Sbjct: 126 AGDRINVGPFSIEAVGVNHSIPEPMSLVIRTPLGTVVHTGDWKIDLEPSLGPITNEARFR 185 Query: 199 ----QNLDFLIID---ALKNGLHSSHFSLSESLKKI 227 + + L+ D AL++G+ S +SESL KI Sbjct: 186 QVGEEGVLALVCDSTNALRDGVSPSEREVSESLAKI 221 >gi|17545866|ref|NP_519268.1| hypothetical protein RSc1147 [Ralstonia solanacearum GMI1000] gi|17428160|emb|CAD14849.1| probable metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum GMI1000] Length = 261 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLR-EQVL----SIDAVLYTHPHADHIHGIDGLR 96 + ++ ++T +++D G V R E++ S+DA+L TH H DHI Sbjct: 16 ALLVESTDGTTSTRILLDCGFGIRETVRRLERLGCAPASLDAILVTHEHGDHIG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--- 153 Y K + V+ + Y + + V C Sbjct: 71 AYAFAAKYSVPVWTSHGT-------------------YRATASLRGADRAAVRFCRADDA 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + +P H L F F + + TD L L +++ Sbjct: 112 FSIGDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLHAFVLEC 170 >gi|282850561|ref|ZP_06259940.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] gi|282580054|gb|EFB85458.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] Length = 268 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 32/172 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G V R + L ID + +H H+DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNRLKELQIDMAQVEGIFVSHEHSDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNRLIELTKGSLTL----GSLIVEPFSV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 H +G TD + L ++ + L+++A H Sbjct: 124 SHDAADPIGINVFAGNDKATIVTDTGVISDDILRRIDDTTLLVLEA-NYDPH 174 >gi|114052516|ref|NP_001039792.1| zinc phosphodiesterase ELAC protein 1 [Bos taurus] gi|109893820|sp|Q29RY4|RNZ1_BOVIN RecName: Full=Zinc phosphodiesterase ELAC protein 1; AltName: Full=ElaC homolog protein 1; AltName: Full=Ribonuclease Z 1; Short=RNase Z 1; AltName: Full=tRNA 3 endonuclease 1; AltName: Full=tRNase Z 1 gi|88758635|gb|AAI13357.1| ElaC homolog 1 (E. coli) [Bos taurus] gi|296473700|gb|DAA15815.1| elaC homolog 1 [Bos taurus] Length = 363 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P +S + R + D G Sbjct: 2 SMDVTFLGTGAAYPSPTRG-----------------ASALVLRC----EGECWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPVGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ + + + +P +V+ +V + P Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCP 131 >gi|163846966|ref|YP_001635010.1| metal-dependent hydrolase [Chloroflexus aurantiacus J-10-fl] gi|222524787|ref|YP_002569258.1| metal-dependent hydrolase [Chloroflexus sp. Y-400-fl] gi|163668255|gb|ABY34621.1| metal-dependent hydrolase [Chloroflexus aurantiacus J-10-fl] gi|222448666|gb|ACM52932.1| metal-dependent hydrolase [Chloroflexus sp. Y-400-fl] Length = 280 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 72/206 (34%), Gaps = 27/206 (13%) Query: 56 VIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++DTG F MQ + +L +H + DHI G+ G +D+Y Sbjct: 39 IVLDTGTGFCMLGDELMQGEFGRGRGTLTLLISHTYWDHILGLP-FPGVVHIPGNRLDIY 97 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND--VPICMKSAG---GVIEAIPI 164 L + + Y P+ I PI + I A+P+ Sbjct: 98 GPDSTRGSLQMVYDGMLSPV----YSPVFGLAHIGATHRFTPISTEPFIVGQLTIRAMPL 153 Query: 165 -LQQHGRISSLGFRFGN--VAYCTDV----NAFPAESLEKLQNLDFLIIDA--LKNG--L 213 + H I + G + Y TDV ++ + + LI A L++ Sbjct: 154 SYRPHSPIWAYRLEEGGRALVYITDVRYSERGIREAAIAFAKQANVLIHSAPYLRDEQVE 213 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H + ++++ + + + +L H Sbjct: 214 DYGHSRVEDAIEMAQAADVERLLLFH 239 >gi|309812677|ref|ZP_07706421.1| ComEC/Rec2-like protein [Dermacoccus sp. Ellin185] gi|308433372|gb|EFP57260.1| ComEC/Rec2-like protein [Dermacoccus sp. Ellin185] Length = 828 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Query: 51 GSNTTVIVDTGP--DFYMQVL-REQVLSIDAVLYTHPHADHIHGIDGL 95 G+ V++D GP Q L R + ++DAV+ TH HADH+ G+ + Sbjct: 572 GATRAVMIDVGPADGHPAQCLERHGITTLDAVILTHFHADHVGGLAEV 619 >gi|157737173|ref|YP_001489856.1| hypothetical protein Abu_0927 [Arcobacter butzleri RM4018] gi|157699027|gb|ABV67187.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 777 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 35/199 (17%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDC 114 +I+DTG +L ++ I+ + TH H+DHI + L +F ++ + +YA+ + Sbjct: 28 IIIDTGNVI--NILGDKSSLINHIFLTHSHSDHIADLPFLLDSFFENRRETLIIYASKET 85 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-------KSAGGVIEAIPILQQ 167 ++ L E +D+ +P +I + + ++ + I Sbjct: 86 IEVLKE------HTFNDKVWPDFSKINLIGSEKKSLAFKEIKENEETIIDNYKIKAISAT 139 Query: 168 HGRISSLGFRF---GNVAYC--TDVNAFPAESLEKL---QNLDFLIIDAL------KNGL 213 H S GF AY D + ++++ Q + LII+ K Sbjct: 140 H-IEGSFGFVITKDEKEAYIISGDT-YINEKIIQEINLNQKIKLLIIECSFPNKMEKLAF 197 Query: 214 HSSHFS---LSESLKKIEL 229 S H + L E L KI Sbjct: 198 DSKHLTPKILKEMLNKINR 216 >gi|329767824|ref|ZP_08259340.1| hypothetical protein HMPREF0428_01037 [Gemella haemolysans M341] gi|328838925|gb|EGF88519.1| hypothetical protein HMPREF0428_01037 [Gemella haemolysans M341] Length = 209 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 11/137 (8%) Query: 52 SNTTVIVDTGPDF-YMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 VIVD G F +Q + E + I+A+L TH H DHI +D K + VY Sbjct: 24 DGRGVIVDPGEGFERIQKAVEELNVKIEAILLTHAHFDHIMSLDE----CRKHYG-VPVY 78 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L ++ + L PP+ +P E + + AG +P Sbjct: 79 ISEHERDWL-QNPDFNGSTLFRLRRPPMTDPAEFEF-EENKKYEIAGLSFTVLPTPGHSP 136 Query: 170 RISSLGFRFGNVAYCTD 186 S F FG D Sbjct: 137 GGVS--FDFGKFIVVGD 151 >gi|183985326|ref|YP_001853617.1| hypothetical protein MMAR_5358 [Mycobacterium marinum M] gi|183178652|gb|ACC43762.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length = 381 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 70/259 (27%), Gaps = 75/259 (28%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFL-------KQ 102 ++D G + D A+ TH H DHI +FL Sbjct: 93 GGDLYLIDCGLGSLNAFTNAGLQFNDLKAIFITHLHTDHIV---DYYSFFLSGGFQAPPG 149 Query: 103 KRPIDVY----------------------------AAPDCMKHLFESFRY---CF----- 126 + PI VY + L ++F Y F Sbjct: 150 RAPIPVYGPGPAGGLPPSEIGNKNPATVNPANPTPGLAATTEALHQAFAYSSNIFIRDYG 209 Query: 127 -------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + P + P + S V ++ + + FRF Sbjct: 210 IDNVQDLAKVIEIPVPAGSDYRNTAPKVSPFPVVSDDNVSVTTTLVPHYDVYPAFAFRFD 269 Query: 180 ------NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNG-------LHSSHFSL 220 ++ + D + D L+ +D G L SH S Sbjct: 270 VKDPAVSITFSGDTTK-SDNLVALANGTDILVHEAMFSLDTAYYGNVFPPDYLPKSHTSA 328 Query: 221 SESLKKIELINPKNAILTH 239 + + ++ PK+ IL+H Sbjct: 329 EQVGEVAAVVKPKHLILSH 347 >gi|86137577|ref|ZP_01056154.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] gi|85825912|gb|EAQ46110.1| metallo-beta-lactamase family protein [Roseobacter sp. MED193] Length = 556 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 57/195 (29%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + + G ++VD G F LRE+V ++A+ TH H D Sbjct: 22 AYVYGYGKPGKERLILVDLGVAFPDMDSTPGVDLIMPDISWLRERVDQLEAIFITHGHED 81 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI + L + + VYA ++R + P+V V Sbjct: 82 HIGAVSHLYS-----QLNVPVYARAFTANLARRKM-------EERGHDPLVVKTV----- 124 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 + G H S G G V + D AF E Sbjct: 125 GAWPEVTKLGPFSVGFAPMAHSIPESAGLVIDSPGGRVVHTGDFKLDRTPLVGEAFDPEM 184 Query: 195 LEKLQ--NLDFLIID 207 ++ + LI D Sbjct: 185 WAEIAKPGIKALICD 199 >gi|85711149|ref|ZP_01042209.1| Possible cAMP phosphodiesterase, metallo-beta-lactamase superfamily protein [Idiomarina baltica OS145] gi|85695062|gb|EAQ33000.1| Possible cAMP phosphodiesterase, metallo-beta-lactamase superfamily protein [Idiomarina baltica OS145] Length = 248 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 28/228 (12%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAA 111 N ++D G L E + +I + TH H DHI + Q R P+ VY Sbjct: 25 NGETLIDAGTGLSSLQLSE-MKAIRHIFLTHAHMDHIAALPTFVSNLFDQSRLPLKVYGL 83 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVN--PIVIENNDVPICMKSAGGVIEAIPILQQHG 169 ++ L + + F + + + ++E ++ + H Sbjct: 84 AHSLERLKQ---HIFNNDIWPDFTQVQDNGTPMLELVEIKPGQVIEHQGMTLTAFEVPHA 140 Query: 170 RISSLGFRFG--------NVAYCTDVNAFPA--ESLEKLQNLDFLIIDALKNGLHSS--- 216 I ++G+ + +C D A +L +L + L+++ Sbjct: 141 -IPTIGYAVQQPKVSEHSHFVFCADCIVTDALVSTLNELPPISTLMVECSFPDRLEEVAV 199 Query: 217 ---HFSLSESLKKIELIN--PKNAILTHM--HVDLDYDMVLKSTPSRV 257 H + S + +E + P + +TH+ + + VL++ P V Sbjct: 200 KTQHMTPSLVSRLLEQLEKPPHSVWITHLKPSYEEELRDVLRAEPWHV 247 >gi|19745986|ref|NP_607122.1| ribonuclease Z [Streptococcus pyogenes MGAS8232] gi|50914097|ref|YP_060069.1| ribonuclease Z [Streptococcus pyogenes MGAS10394] gi|56807428|ref|ZP_00365392.1| COG1234: Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus pyogenes M49 591] gi|71903370|ref|YP_280173.1| ribonuclease Z [Streptococcus pyogenes MGAS6180] gi|94990293|ref|YP_598393.1| ribonuclease Z [Streptococcus pyogenes MGAS10270] gi|94994215|ref|YP_602313.1| ribonuclease Z [Streptococcus pyogenes MGAS10750] gi|139473916|ref|YP_001128632.1| ribonuclease Z [Streptococcus pyogenes str. Manfredo] gi|209559271|ref|YP_002285743.1| ribonuclease Z [Streptococcus pyogenes NZ131] gi|41017563|sp|Q8P1A6|RNZ_STRP8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|73917869|sp|Q5XCH7|RNZ_STRP6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123639996|sp|Q48TY8|RNZ_STRPM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991507|sp|Q1JH87|RNZ_STRPD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991508|sp|Q1J705|RNZ_STRPF RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991509|sp|A2REY2|RNZ_STRPG RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808673|sp|B5XL36|RNZ_STRPZ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|19748148|gb|AAL97621.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|50903171|gb|AAT86886.1| Metal-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71802465|gb|AAX71818.1| metal-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|94543801|gb|ABF33849.1| Ribonuclease Z [Streptococcus pyogenes MGAS10270] gi|94547723|gb|ABF37769.1| Ribonuclease Z [Streptococcus pyogenes MGAS10750] gi|134272163|emb|CAM30408.1| ribonuclease Z [Streptococcus pyogenes str. Manfredo] gi|209540472|gb|ACI61048.1| Ribonuclease Z [Streptococcus pyogenes NZ131] Length = 309 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 89/295 (30%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLALKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + +++ +D+Y Sbjct: 43 QRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGPIGIKTYV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP-----------------------IVIENN 146 + L Y F DD++ I+ +E Sbjct: 103 LTSLKVSGARVPYQIHFHEFDDKSLGKIMETDKFVVYAERLAHTIFCMGYRVVQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIP--------ILQQHGRISSLGFRFGN------VAYCTDVNAFPA 192 +K+AG + + + GR+ + D + Sbjct: 163 LDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITIIGDTRK-TS 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S++ ++ D L+ ++ + + H + ++ + K +L H+ Sbjct: 222 ASVKLAKDADVLVHESTYGKGDERIARNHGHSTNMQAAQIAHEAGAKRLLLNHVS 276 >gi|313673369|ref|YP_004051480.1| beta-lactamase domain protein [Calditerrivibrio nitroreducens DSM 19672] gi|312940125|gb|ADR19317.1| beta-lactamase domain protein [Calditerrivibrio nitroreducens DSM 19672] Length = 534 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 81/225 (36%), Gaps = 53/225 (23%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK + T LG GV I G+ + N S++ + + + + +D Sbjct: 1 MK--FSVTFLG-----GVGEIGGNCYLYETEN-------SAIIVDCGLKFFQSEFIGIDF 46 Query: 61 G-PDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 PDF +++ +RE++ V+ TH H DHI + +F P+ +YA ++ + Sbjct: 47 TIPDFKHLESVREKLK---GVIITHGHEDHIGALPYFLKFF-----PLPIYAGSYAIRLI 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y P V + + + G + + H S F Sbjct: 99 KHKIA-------QSKYRPKSFNTVADGETIVL------GDFQINFLEVNHSIPDSF-FLI 144 Query: 179 GNV---AY--CTDV---------NAFPAESLEKLQN-LDFLIIDA 208 +V Y C D FP E LEK + ++ L ID Sbjct: 145 MDVDNKRYIHCGDFRVEKNPLIGKPFPFELLEKYKGNVEALFIDC 189 >gi|163784796|ref|ZP_02179587.1| hypothetical protein HG1285_12627 [Hydrogenivirga sp. 128-5-R1-1] gi|159879934|gb|EDP73647.1| hypothetical protein HG1285_12627 [Hydrogenivirga sp. 128-5-R1-1] Length = 131 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 15/117 (12%) Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDA--LKNGLHSS 216 I +H + G F V Y F L +N D +I + ++ Sbjct: 14 IKHKHKGADTYGLSFETENKKVVYVP-CGKFFEGMLSGYPENADLVIFNTTFVRPKPAID 72 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDY---DMVLKSTPSR----VVPAFDGMQF 266 H S + +K I + PK A++TH VD+ + V K V+PA DGM+ Sbjct: 73 HLSAEDVIKLINALKPKKAVITHFSVDILKSNPNEVAKYISENTNTLVIPATDGMKI 129 >gi|288928349|ref|ZP_06422196.1| ribonuclease Z [Prevotella sp. oral taxon 317 str. F0108] gi|288331183|gb|EFC69767.1| ribonuclease Z [Prevotella sp. oral taxon 317 str. F0108] Length = 304 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N +S + ++D G +Q+ Sbjct: 8 ILGCGSAL-------------PTLKHNA---TSQVVDIRG-----KLFMIDCGEGTQVQL 46 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH G+ G+ F R + VYA + L + Sbjct: 47 RRSRIRFTKIGAVFISHLHGDHCFGLIGMISTFGLLGRTAALHVYAPAELGPMLRMQLDF 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ ++ + + +E+IP+ RI GF F Sbjct: 107 FCGGIEFEVV-----FHAVDTKVQQVIYEDKSLTVESIPLEH---RIDCCGFLF 152 >gi|242279928|ref|YP_002992057.1| metallo-beta-lactamase family protein [Desulfovibrio salexigens DSM 2638] gi|242122822|gb|ACS80518.1| metallo-beta-lactamase family protein [Desulfovibrio salexigens DSM 2638] Length = 318 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 82/258 (31%), Gaps = 50/258 (19%) Query: 49 ERGSNTTVIVDTGPDFYM-----QVLREQVLSID-AVLYTHPHADHIHGIDGLRGYFLKQ 102 E + +I D G R +L +H H DH+ G ++ Sbjct: 69 EGQGDEYIICDCGTGLRDLGNKIMADRHGAPGAHFHILMSHLHWDHVQGFPFFVPAYIP- 127 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI----CMKSAGGV 158 I Y ++ + + +P + + E V + + AG Sbjct: 128 GNKITFYGGHPNIEKVLRD------QQSEPCFPVHFDNLAAEFEFVRLKTGQKFQIAGVD 181 Query: 159 IEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESL------EKLQNLDFLIIDA 208 IE G S G+RF Y TD A +L E + D LI+DA Sbjct: 182 IEIKAQYHPGG---SFGYRFEKNGKSAVYSTDCEHKSATALADKGFVEFFKEADLLIMDA 238 Query: 209 LKNGLHSS-------HFSLSESLKKIELINPKNAILTH-------------MHVDLDYDM 248 + ++ H + +++ + K L H + +++ Sbjct: 239 QYSFAEANSIKEDWGHSNNIIAVELSGMAKVKTLCLFHQEPVRDDFQLQKFLDDTIEFSQ 298 Query: 249 VLKSTPSRVVPAFDGMQF 266 + + P +++ A DG+ Sbjct: 299 LAEFRPDKIIMAQDGLCI 316 >gi|188587486|ref|YP_001919031.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352173|gb|ACB86443.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 261 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 37/177 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I +T +++D G + M + + + ++ TH H DH+ G+ Sbjct: 14 SIYIEYY-----DTKLLIDAGLSGKAIERKMANVNKDPKELTGIIVTHEHRDHVKGVG-- 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS- 154 L ++ I VYA D L P + V E ++ + + Sbjct: 67 ---VLARRFNIPVYATRDTWPLL-----------------PSIIGTVPEKSEKELPKQGL 106 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + P H + +G + TD F +KL N LI++ Sbjct: 107 YIQDLYIEPFPVSHDAVDPVGLCLYTPEKKLGIATDSGIFTPPMFKKLTNCHGLILE 163 >gi|166366524|ref|YP_001658797.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] gi|166088897|dbj|BAG03605.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] Length = 175 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 31/168 (18%) Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAY 183 + + P + +E ++ + G + H ++G+R + AY Sbjct: 2 SHPNFPVPLQIMRADLEFYNLEMGETLHCGDVTVETRPLNHPG-EAVGYRVNWQGLSAAY 60 Query: 184 CTDVNAFPAE----SLEKLQNLDFLIIDALKNGLHSS----------HFSLSESLKKIEL 229 TD FP L + D +IIDA + H + +++K Sbjct: 61 ITDTEHFPDRFDDNVLALARQADVMIIDATYTDEEYNDPKYSKVGWGHSTWQQAVKIARA 120 Query: 230 INPKNAILTHMHVDLDY---------DMVLKSTPSRVVPAFDGMQFSS 268 K +L H D + + K P + A +G+ Sbjct: 121 AQVKQLVL--FHHDPAHNDDFLDRIGEEARKIFPETI-LAREGLSIEL 165 >gi|163846566|ref|YP_001634610.1| beta-lactamase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524357|ref|YP_002568828.1| beta-lactamase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667855|gb|ABY34221.1| beta-lactamase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448236|gb|ACM52502.1| beta-lactamase domain protein [Chloroflexus sp. Y-400-fl] Length = 556 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 61/186 (32%), Gaps = 34/186 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ I +L TH H DHI + L P +Y + L Sbjct: 57 LREKTDHIRGILLTHGHEDHIGAVPHLIA---DLGFP-PIYGTKLTLGLLGNR------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V + I N VP + G H ++GF G + Y Sbjct: 106 LREHRLHDKVTTVQI-NERVPFQV----GQFNVEAFHIAHSIPDAVGFAITTPAGLLVYL 160 Query: 185 TD-------VNAFP--AESLEKLQN--LDFLIIDALKNGL---HSSHFSLSESLKKIELI 230 TD V+ P E + +L N L+ D ++ S ++ E+ I Sbjct: 161 TDWKLDHTPVDGRPTDLEKIAELGNRKPLVLVTDCVRVESKGYTPSEATVGEAFDNIFAT 220 Query: 231 NPKNAI 236 P I Sbjct: 221 APGRII 226 >gi|227894301|ref|ZP_04012106.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047] gi|227863878|gb|EEJ71299.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus ultunensis DSM 16047] Length = 262 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 81/237 (34%), Gaps = 46/237 (19%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G ++L E + ID +H H DH G+ G +++ I Sbjct: 17 GQHKILMDAGLSGKKIKELLAEVGVNINDIDMAFLSHDHTDHSGGL----GVLMRRYPKI 72 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D +A ++L ++ P IE G ++ Sbjct: 73 DAFANSGTWQYLLDT--------QKIGKLPAEQINTIEPGQTK-----TFGDLDVTAFAT 119 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS- 215 H + F VA+ TD + E +++ D +++ L++G +S Sbjct: 120 SHDAAEPQYYIFTSGGKRVAFLTDTDYVSEEVEGTIEDADAYMMEFNYDTMMLRDGPYSW 179 Query: 216 ----------SHFSLSESL-KKIELINP--KNAILTHMHVDLDYDMVLKSTPSRVVP 259 H S E+ ++++ P K+ L H + + + + T V+ Sbjct: 180 PLKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEYLARETAKEVLV 236 >gi|257077192|ref|ZP_05571553.1| metal dependent hydrolase [Ferroplasma acidarmanus fer1] Length = 252 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 30/240 (12%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D GP +L + +D +L +H H DH G+ + Sbjct: 18 RNVSIII--------DGHILLDCGPHTIESMLESGINPAQVDKILISHMHLDHYGGLAEI 69 Query: 96 RGY--FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN----DVP 149 Y + K + + MK+ + + + D + N + I NN +V Sbjct: 70 LWYRAAREAKDEVIILGPKGIMKNTEQLLK-IYNTPDHYMFSMKSNYVEINNNGEIYEVK 128 Query: 150 ICMKSAGGVIEAIPILQQHG---RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI- 205 H + L +R VAY D A+ + + D + Sbjct: 129 TKFTDKVKNDYIEAFTGNHSIPDNMYRLEYRGNTVAYTGDT-AYNDNISQVGEKADIFLH 187 Query: 206 ------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 DA + S H + S +L+ + K + H+ D + + ++ Sbjct: 188 EMTFTDEDA-EIAKLSKHSTYSSALRGFSESHAKKLVPVHLT-DKTVSTLKAKSSENIIL 245 >gi|115379173|ref|ZP_01466293.1| TaR3 [Stigmatella aurantiaca DW4/3-1] gi|115363819|gb|EAU62934.1| TaR3 [Stigmatella aurantiaca DW4/3-1] Length = 353 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 13/167 (7%) Query: 53 NTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +I D G ++RE + ++H H DH+ G +L + +Y Sbjct: 106 GHRLIFDAGTGIRALGELLMRESAPQKATLFFSHLHWDHVQGFPFFTPAYLGTTE-LSLY 164 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 +S + P + + G P+ H Sbjct: 165 GPGANGAQALQSVLVQQMEPPNFPVPLSIMRSRMTFGSALHGTPVEVGPFRVTPVDVPHP 224 Query: 170 RISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDA 208 + L +R Y TDV ++ + L+ D L++DA Sbjct: 225 Q-GCLAYRVEADGHTFVYATDVELARDSLTRDVGRYLEGADALVLDA 270 >gi|113931274|ref|NP_001039086.1| elaC homolog 2 [Xenopus (Silurana) tropicalis] gi|89267984|emb|CAJ81452.1| elac2 (prov) [Xenopus (Silurana) tropicalis] Length = 482 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 105/301 (34%), Gaps = 66/301 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++ VP R SS ++ + ++++D G + Sbjct: 139 EVIFLGTGSA--VPM--------------KTRNVSSTLVNV----SPSHSLLLDCGEGTF 178 Query: 66 MQVLR-------EQVLSIDAVLYTHPHADHIHGIDGL-----RGY--FLKQKRPIDVYAA 111 Q+ R E + + A+ +H HADH G+ + RG K P+ V Sbjct: 179 GQLHRHYGENVDEVLSKLSAIFVSHIHADHHTGLLNILFERERGLVTCGKPHTPVSVIGP 238 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIEAIPIL 165 P M L + +C L P + ++N ++ A + + L Sbjct: 239 PLLMTWLNQYHNHCQDILHHMNLIPAKYLTDGTEALSLKNKNLLASFLEAYQLEQFQTCL 298 Query: 166 QQHGRI---SSLGFRFG-NVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALKNGLH- 214 +H R S+ R G + Y D P ++L ++ ++ LI D L+ Sbjct: 299 VRHCRNAYACSVVHRSGWKLVYSGDT--MPCDALVQMGKDASLLIHEATLEDGLEEEAIE 356 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP-------SRVVPAFDGMQFS 267 +H + S+++ +N +L H P +V +FD M+ + Sbjct: 357 KTHSTTSQAIGVGMKMNANFIMLNHFS------QRYAKLPLFSSDFSEKVGISFDHMRIN 410 Query: 268 S 268 Sbjct: 411 L 411 >gi|288961419|ref|YP_003451758.1| beta-lactamase superfamily hydrolase [Azospirillum sp. B510] gi|288913727|dbj|BAI75214.1| beta-lactamase superfamily hydrolase [Azospirillum sp. B510] Length = 250 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 68/218 (31%), Gaps = 38/218 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGI---- 92 SSL ++ R +++D G + RE +IDA+ +TH H DH G+ Sbjct: 18 NSSLIVAADGFR-----LMIDCGHSVPSALWREVPDPDAIDALYFTHHHPDHCFGLVPAL 72 Query: 93 ----DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 D R +P+D+ K L F +R+ + V Sbjct: 73 IRWTDDRRS------KPLDIVTTIGGWKQLALLF-QAGATDPERSLSFPLRW-------V 118 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFL 204 G L +H + + R AY D A P E ++ D L Sbjct: 119 ETPTDGRLGPFRLRTALTRHS-MPNRAIRLEAGGVAFAYSGDGRATPESE-ELFRDADLL 176 Query: 205 IIDALKNGLHSS---HFSLSESLKKIELINPKNAILTH 239 + L + H + + + L H Sbjct: 177 FHECLTVEPDPTQLFHAAYGQLADFPARLGVGEMRLYH 214 >gi|307718763|ref|YP_003874295.1| hypothetical protein STHERM_c10770 [Spirochaeta thermophila DSM 6192] gi|306532488|gb|ADN02022.1| hypothetical protein STHERM_c10770 [Spirochaeta thermophila DSM 6192] gi|315185634|gb|EFU19402.1| hypothetical protein SpithDRAFT_1925 [Spirochaeta thermophila DSM 6578] Length = 314 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 72/224 (32%), Gaps = 30/224 (13%) Query: 46 RVSERGSNTTVIVDTGPDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V R ++ D G + R + + ++H H DHI G+ Sbjct: 63 CVEVRSGADILLFDAGSGIRDFATEIMRRPRKQREYHLFFSHFHWDHIIGLPFFTPL-YD 121 Query: 102 QKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + +Y+ ++L F + IV+E + + G + Sbjct: 122 PGVRVCLYSPVRRFREYLEVLMSPPFFPVTMEAMRADKEFIVLEE---DVPYRVGRGFVT 178 Query: 161 AIPILQQHGRISSLGFRFGN----VAYCTDV-----NAFP-AESLEKLQNLDFLIIDALK 210 IP+ G S +R V Y TDV + P E+ + +D LIID+ Sbjct: 179 PIPMTHPGG---SYAYRIEKGGKAVLYATDVELADEDFLPTPENRRRFSGVDLLIIDSQY 235 Query: 211 ------NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 ++ H S + + +L H + YD Sbjct: 236 TLGEAIEKINWGHSSFTLVVDFAVRWKIPRVLL--FHHEPLYDD 277 >gi|241662689|ref|YP_002981049.1| beta-lactamase domain-containing protein [Ralstonia pickettii 12D] gi|240864716|gb|ACS62377.1| beta-lactamase domain protein [Ralstonia pickettii 12D] Length = 261 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 37/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLR 96 L + S + T +++D G V R + S++A+L TH H+DH+ Sbjct: 17 LLVESASG-ATCTRILLDCGFGIRETVRRLERLGCTPESLNAILVTHEHSDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK--- 153 Y + K I V+ + Y N + V C Sbjct: 71 AYAVAAKFDIPVWTSHGT-------------------YRATENLRGADRAAVRFCRADDM 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G ++ +P H L F F + + TD L + L+++ Sbjct: 112 FCVGDLQILPYTVPHDAREPLQFVFNDGARRLGVLTDAGMLTEYLCAHLAGMHALVLEC 170 >gi|261403346|ref|YP_003247570.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] gi|261370339|gb|ACX73088.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7] Length = 291 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I E ++ D G F M++L IDA++ +H H DH G+ + Sbjct: 29 SFLIKIEDESEKIKNILFDVGTYAKPILFNMKLLHLDPQEIDAIILSHSHVDHTGGVVEM 88 Query: 96 RGYFLKQKRPIDVYAAPD 113 QK PI ++A P Sbjct: 89 VKA--IQKNPIPIFAHPH 104 >gi|146312460|ref|YP_001177534.1| ribonuclease Z [Enterobacter sp. 638] gi|166991102|sp|A4WCQ3|RNZ_ENT38 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|145319336|gb|ABP61483.1| RNAse Z [Enterobacter sp. 638] Length = 305 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 89/297 (29%), Gaps = 73/297 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP T +N +++ + + + D G Sbjct: 1 MELIFLGT--SAGVP-----------TRSRNV---TAILLDLQHPTRAGL-WLFDCGEGT 43 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCM 115 Q+L +D + TH H DH+ G+ GL R P+ ++ Sbjct: 44 QHQLLHTAYHPGKLDKIFITHLHGDHVFGLPGLLCSRSMAGNV-NPLTIFGPAGIREFTE 102 Query: 116 KHLFESFRY--------------CFKALDDRTYPPIVNPIV------IENNDVP---ICM 152 L S + FK +N V IE +D P Sbjct: 103 TALRLSGSWTDYPLEIVEVSEGVVFKDEQYTVTAGALNHPVECYGYRIEEHDKPGALDAA 162 Query: 153 KSAGGVIEAIPILQ--QHGRISSL--GFRFGNVAYCT------------DVNAFPAESLE 196 I+ P+ Q +HG +L G Y + D PA Sbjct: 163 ALIADGIKPGPLFQRLKHGDTVTLEDGRIVNGQDYLSAPQPGKKLVIFGDTAPCPAALAL 222 Query: 197 KLQNLDFLI----IDALKNGLHSS--HFSLSESLKKIELINPKNAILTHMHVDLDYD 247 +N D L+ ++A +S H S ++ + + ++TH+ D Sbjct: 223 A-RNADVLVHEVTLEAAMEEKANSRGHSSTRQAAQLARDASVGKLLVTHISSRYDAQ 278 >gi|157817712|ref|NP_001100876.1| zinc phosphodiesterase ELAC protein 1 [Rattus norvegicus] gi|149064598|gb|EDM14801.1| elaC homolog 1 (E. coli) (predicted), isoform CRA_b [Rattus norvegicus] Length = 362 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 32/156 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + ++PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSVVSRQPIEIYGPVGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 ++ + + + +P +V+ +V + P+ Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCPVE 133 >gi|239612646|gb|EEQ89633.1| tRNA processing endoribonuclease Trz1 [Ajellomyces dermatitidis ER-3] Length = 1233 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 94/328 (28%), Gaps = 110/328 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 729 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 768 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + + + +H HADH G Sbjct: 769 GQLQRAFSPEELREVLRDLKVIWISHLHADHHLGTVSVIRAWHEVTHGALSSTAPVPEPE 828 Query: 92 ------IDGLRGYF------------------LKQKRPIDVYAAPDCMKHLFESFRYCFK 127 + R + + + V A ++F+Y Sbjct: 829 YDLTKLLSEKRLFVASDAKMIEWLAEYSGIENYGFDKLLPVEAD----TSFGDNFKYSHL 884 Query: 128 ALD-----DRTYPPIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQHGR-------ISS 173 + D D P+ + + P ++ A G+ + + H + Sbjct: 885 SRDRQPILDENGNPVKIHLSFNPDRSPFATQLQQATGLSSLLTVPVMHCHGAMATSFVFP 944 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLK 225 GF+ V+Y D P+ ++ D ++ D L++ H + E+L+ Sbjct: 945 SGFK---VSYSGDCR--PSREFARI-GADSTVLIHEATFEDDMLRDAKAKRHSTCGEALR 998 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKST 253 E + +N ILTH + + Sbjct: 999 VAERMRARNVILTHFSQRYAHKPTVPRL 1026 >gi|14591686|ref|NP_143774.1| hypothetical protein PH1945 [Pyrococcus horikoshii OT3] gi|3258389|dbj|BAA31072.1| 284aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 284 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 28/214 (13%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP ++++R ++ ID + +H H DH + Y Sbjct: 46 KNIFVDPGPGALIRMIRYKLDPRKIDVLFISHRHTDHCN---DAEVIVEGM-----TYG- 96 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQH 168 + DD P + + E + + G + + H Sbjct: 97 -VTKRRGILIGSRSVVHGDDAHTPALSKYHLEALEEVHAPNPGDRFKLGNEDMVITPSVH 155 Query: 169 GRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSE 222 +++GFR FG+++Y D F E LI + H S + Sbjct: 156 SDPTTIGFRLKTNFGDISYIADTEYF-EGLEEWHDGTRVLIASVTRPRDMKIPYHLSTDD 214 Query: 223 SLKKIELI--NPKNAILTH----MHVDLDYDMVL 250 + ++ + P+ I+TH MH Y Sbjct: 215 VVYMLKKMKEKPEVLIMTHLGMKMHFAGPYKEAE 248 >gi|325298426|ref|YP_004258343.1| Ribonuclease Z [Bacteroides salanitronis DSM 18170] gi|324317979|gb|ADY35870.1| Ribonuclease Z [Bacteroides salanitronis DSM 18170] Length = 304 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 88/259 (33%), Gaps = 56/259 (21%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAA 111 ++D G +Q+ R ++ ++ + +H H DH G+ G+ F L++ + +Y+ Sbjct: 34 FMIDCGEGTQVQLRRSRLKFSRLNHIFISHLHGDHCFGLIGVISTFGMLERTADLHIYSH 93 Query: 112 PDCMKHLF-------ESFRY--CFKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIE 160 PD + L + Y F D + I + + +P+ M + G + Sbjct: 94 PDLIGILQPQIDFFCKGMSYNVVFHPFDPKARDVIYDDRSVSVETIPLRHRMPTCGFLFR 153 Query: 161 AIPILQQHGRISSLGF--------RFGN--------------------------VAYCTD 186 P R + R N AYC+D Sbjct: 154 EKPTPNHIKREMIDFYQIPVYMINRIKNGEDFITEEGKTIPNDWLTTPSDPPRSYAYCSD 213 Query: 187 VNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 +P+ + E++Q +D L +A + H + ++ + K ++ H Sbjct: 214 TAYYPSVT-EQIQGVDLLFHEATFASSDSARARQTQHSTARQAAQIARDAQVKRLVIGHF 272 Query: 241 HVDLDYDMVLKSTPSRVVP 259 D + +L V P Sbjct: 273 SARYDDEEILLKEAQEVFP 291 >gi|315038180|ref|YP_004031748.1| ribonuclease Z [Lactobacillus amylovorus GRL 1112] gi|325956632|ref|YP_004292044.1| ribonuclease Z [Lactobacillus acidophilus 30SC] gi|312276313|gb|ADQ58953.1| ribonuclease Z [Lactobacillus amylovorus GRL 1112] gi|325333197|gb|ADZ07105.1| ribonuclease Z [Lactobacillus acidophilus 30SC] gi|327183457|gb|AEA31904.1| ribonuclease Z [Lactobacillus amylovorus GRL 1118] Length = 311 Score = 55.9 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R S + + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVSCVALKLLDE--LNGIWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVR 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP +E ++ + + G H RI S GFR Sbjct: 102 TSLQ---ISRTKVSYP----IKFVELSEPGLICEDKG--FRVYTDRLDH-RIPSFGFRV 150 >gi|317140202|ref|XP_001818043.2| tRNA processing endoribonuclease Trz1 [Aspergillus oryzae RIB40] Length = 1155 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 105/316 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS + ++D G + Sbjct: 668 EIITLGTGSSS----------------PSKYRNVSSTLVHVPG----YGYYLLDCGENTL 707 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRP-------- 105 Q+ LRE + ++ + +H HADH G I Sbjct: 708 GQLKRVFEPEKLREVLQNLRMIWISHLHADHHLGTASVIKAWFQENYPNGDSQTSALETD 767 Query: 106 ---------------------IDVYAAPDCM----------------KHLFESFRYC--- 125 ++ YA+ + + L F Y Sbjct: 768 MSKILKEKRLFLVSEENMIWWLEEYASAENFGFGKLIPLSAYPVIQNRALRTKFVYRHCR 827 Query: 126 ----FKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR-------IS 172 F + TY P + ++ P+ ++ A G+ + + H R + Sbjct: 828 ADGSFPGQEVETYRPRTTELSFDDESSPLTPLLREATGLTDLLTTKVSHCRGAMAVSLVF 887 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG------LHSSHFSLSESLK 225 GF+ +++ D P+ S + LI +A + H + SE+L+ Sbjct: 888 PNGFK---LSFSGDCR--PSPSFAAIGHGSTVLIHEATFQDDMGVSAIAKKHSTTSEALE 942 Query: 226 KIELINPKNAILTHMH 241 + + +LTH Sbjct: 943 VGRRMEARAILLTHFS 958 >gi|238483971|ref|XP_002373224.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus flavus NRRL3357] gi|220701274|gb|EED57612.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus flavus NRRL3357] Length = 1080 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 105/316 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS + ++D G + Sbjct: 585 EIITLGTGSSS----------------PSKYRNVSSTLVHVPG----YGYYLLDCGENTL 624 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRP-------- 105 Q+ LRE + ++ + +H HADH G I Sbjct: 625 GQLKRVFEPEKLREVLQNLRMIWISHLHADHHLGTASVIKAWFQENYPNGDSQTSALETD 684 Query: 106 ---------------------IDVYAAPDCM----------------KHLFESFRYC--- 125 ++ YA+ + + L F Y Sbjct: 685 MSKILKEKRLFLVSEENMIWWLEEYASAENFGFGKLIPLSAYPVIQNRALRTKFVYRHCR 744 Query: 126 ----FKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR-------IS 172 F + TY P + ++ P+ ++ A G+ + + H R + Sbjct: 745 ADGSFPGQEVETYRPRTTELSFDDESSPLTPLLREATGLTDLLTTKVSHCRGAMAVSLVF 804 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG------LHSSHFSLSESLK 225 GF+ +++ D P+ S + LI +A + H + SE+L+ Sbjct: 805 PNGFK---LSFSGDCR--PSPSFAAIGHGSTVLIHEATFQDDMGVSAIAKKHSTTSEALE 859 Query: 226 KIELINPKNAILTHMH 241 + + +LTH Sbjct: 860 VGRRMEARAILLTHFS 875 >gi|153832225|ref|ZP_01984892.1| arylsulfatase [Vibrio harveyi HY01] gi|148871536|gb|EDL70391.1| arylsulfatase [Vibrio harveyi HY01] Length = 318 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 48/262 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LG G P + R S I + V++D G Sbjct: 33 FTLQLLGSGG----PI------------SDDLRASSGELIWWKG----KSRVMIDAGGGV 72 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPD--CMKHL 118 Y++ + + +D + +H H DH+ + L GYF ++ P+D+ L Sbjct: 73 YLRFGQAGGKLEDLDFLGLSHFHTDHVADVPALLKGGYFFDRQDPLDIAGPEAGSAFPSL 132 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV------------IEAIPILQ 166 + F D+ Y + + P+ + + + Sbjct: 133 TGYMKALFDG-DEGAYAYLNGLFDGSDGLFPVTITDVPYKTSQGTKVYEQDGLTIYALGI 191 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-ALKNGLHSS----H 217 HG + L FR G + D N + ++ + D L++ A+ H Sbjct: 192 PHGDVPCLAFRIESAEGVMVISADQNGSNPDFIDFAKGADILLMPLAIHEEADEVSSFMH 251 Query: 218 FSLSESLKKIELINPKNAILTH 239 S K +NPK +L H Sbjct: 252 AKPSVVGKIAAEVNPKLLVLNH 273 >gi|120404862|ref|YP_954691.1| ribonuclease Z [Mycobacterium vanbaalenii PYR-1] gi|119957680|gb|ABM14685.1| beta-lactamase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 300 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 77/269 (28%), Gaps = 64/269 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P RR S + + T +VD G Sbjct: 16 IEVTLLGTGS----PI------------PDARRAGPSTLVRAGGQ-----TFLVDCGRGV 54 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG-----LRGYFLKQKRPIDVYAAPDCMKH 117 ++ V +I A+L TH H+DHI + F P+ + P + Sbjct: 55 LQRLAAVGVGANNITALLLTHLHSDHIADLGDVLITRWVSNFAPDLAPLPIIGPPGTAEV 114 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG---VIEAIPILQQHGRI-SS 173 + + + F + +V + + H + + Sbjct: 115 VENTLK-AFGFDIGYRIAHHADLTTPPPVEVEEVTEGVVWGRDEVSIRVGPTDHRPVTPT 173 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS------ 216 +GFR +V D + LD L A ++ L + Sbjct: 174 IGFRIEHNGASVVLAGDTV--------PCRGLDELAAGAGALVHTVIRPDLIEAMPVQRI 225 Query: 217 ------HFSLSESLKKIELINPKNAILTH 239 H S+ ++ ILTH Sbjct: 226 RDICDYHSSVEQAADTATRAGVGILILTH 254 >gi|83765898|dbj|BAE56041.1| unnamed protein product [Aspergillus oryzae] Length = 1264 Score = 55.9 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 105/316 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS + ++D G + Sbjct: 769 EIITLGTGSSS----------------PSKYRNVSSTLVHVPG----YGYYLLDCGENTL 808 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRP-------- 105 Q+ LRE + ++ + +H HADH G I Sbjct: 809 GQLKRVFEPEKLREVLQNLRMIWISHLHADHHLGTASVIKAWFQENYPNGDSQTSALETD 868 Query: 106 ---------------------IDVYAAPDCM----------------KHLFESFRYC--- 125 ++ YA+ + + L F Y Sbjct: 869 MSKILKEKRLFLVSEENMIWWLEEYASAENFGFGKLIPLSAYPVIQNRALRTKFVYRHCR 928 Query: 126 ----FKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR-------IS 172 F + TY P + ++ P+ ++ A G+ + + H R + Sbjct: 929 ADGSFPGQEVETYRPRTTELSFDDESSPLTPLLREATGLTDLLTTKVSHCRGAMAVSLVF 988 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG------LHSSHFSLSESLK 225 GF+ +++ D P+ S + LI +A + H + SE+L+ Sbjct: 989 PNGFK---LSFSGDCR--PSPSFAAIGHGSTVLIHEATFQDDMGVSAIAKKHSTTSEALE 1043 Query: 226 KIELINPKNAILTHMH 241 + + +LTH Sbjct: 1044 VGRRMEARAILLTHFS 1059 >gi|257455204|ref|ZP_05620439.1| ribonuclease Z [Enhydrobacter aerosaccus SK60] gi|257447166|gb|EEV22174.1| ribonuclease Z [Enhydrobacter aerosaccus SK60] Length = 349 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 96/318 (30%), Gaps = 106/318 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV---IVDTG 61 T LG S G+P R ++L +S ++ V +VD G Sbjct: 2 LTLTFLGT--SAGIPT--------------KHRNVTALAVSLINPYSRVKNVPWLLVDCG 45 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKH 117 Q+L+ + + + TH H DH +G+ GL +K P+ V A + Sbjct: 46 EATQHQLLKTPLSVMQLALICITHVHGDHCYGLPGLLASMAMSGRKHPLTVIAPQAIADY 105 Query: 118 LFE---------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 L SF F A+++R P+ ++ D ++ I H Sbjct: 106 LAAVQATTALMISFDIHFIAIENRAQGDSYQPVTLDLTDD--------HQLQIDVIALSH 157 Query: 169 GRISSLGFRF-------------------------GNVAYCTDV---------------- 187 RI S F+F G + Y DV Sbjct: 158 -RIPSHAFKFTQQLSKKTLLTEKLTELNVVDKRLWGKLKYGIDVNLDDNTLLKSADFITT 216 Query: 188 ------------NAFPAESLEKLQNLDFLIIDAL------------KNGLHSSHFSLSES 223 N P + + + D L+ +A N H + + Sbjct: 217 TLHKTVLIVAGDNDSPELLADAISDTDVLVHEATYTQAIADKRKLAPNYFDPMHSTAKQV 276 Query: 224 LKKIELINPKNAILTHMH 241 + +L KN ILTH Sbjct: 277 AEFAQLSQLKNLILTHFS 294 >gi|242398691|ref|YP_002994115.1| Hydrolase, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] gi|242265084|gb|ACS89766.1| Hydrolase, metallo-beta-lactamase superfamily [Thermococcus sibiricus MM 739] Length = 273 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 17/81 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGID 93 S+ + ++VD G D VL + +D + TH H DH G++ Sbjct: 24 SVLVEHKG-----KNILVDAGSDGK--VLLHNIKALNISPEEVDVIFLTHGHYDHTGGLE 76 Query: 94 GLRGYFLKQKRPIDVYAAPDC 114 + +K ID+YA PD Sbjct: 77 E---FLKARKSSIDIYAHPDV 94 >gi|62185458|ref|YP_220243.1| hydrolase [Chlamydophila abortus S26/3] gi|62148525|emb|CAH64296.1| conserved hypothetical hydrolase [Chlamydophila abortus S26/3] Length = 262 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 77/221 (34%), Gaps = 55/221 (24%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ +++D G Q++ +LS++ A+ +H H+DHI GI + Sbjct: 21 ESSKILIDLG--ISKQLVTRGLLSMNVHPEDIQAIFVSHEHSDHISGIKS-----FIKTY 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + ++L + +++ + ++ Sbjct: 74 HTPIICNLETARNLCQ----------------LLDMHP-TFKIFSTGTTFSFHDLKIQTF 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------LK 210 H + +GF F + +CTD+ + + +L + D+L+I+A + Sbjct: 117 NVPHDAVDPVGFIFHYRDEKLGFCTDLGWVTSWIIHELYDCDYLLIEANHDPELVRQSSR 176 Query: 211 NGLHSS-------HFSLSESLKKIELI---NPKNAILTHMH 241 ++ H S E + ++ + K L H+ Sbjct: 177 PDIYKKRVLSKLGHLSNHECAELLQKVLTPKIKKIYLAHLS 217 >gi|14325492|dbj|BAB60396.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 311 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 72/289 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P P V + + + D Sbjct: 8 MASNIKIVFFGTGGSWPTPI---------RAMP------------GVGIQIDDVFNLFDC 46 Query: 61 GPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+++ +SID + TH H DH G+ GL F + + ++++ + Sbjct: 47 GEGTQKQIMKSKWSFMSIDNIFITHFHGDHFLGLIGLVQSMSFNNRTKDLNIFGPRGAIG 106 Query: 117 HLFE---------SFR---YCFKALDDRTYPPIVNPIVIENNDVPIC------------- 151 + FR Y + + + ++ VP Sbjct: 107 IISNAINIGYYTLRFRINVYELEPDKTYDLGKFLLKTTLNDHPVPALSYTIEEKDIIRVD 166 Query: 152 ---MKSAGGVIEAIPILQQHGRIS-----------SLGFRFGN-VAYCTDVNAFPAESLE 196 K G + I ++ +G S G R G + Y D + + Sbjct: 167 PQKAKELGIPSKIIEKIRDNGTYEYRGRKYSIDEISGGIRKGRKIVYTGDTKPM-QKMAD 225 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 ++ D LI D + H S ++ + L H Sbjct: 226 FAKHADVLIHDTTTDSSFEPAVNQFGHSSAKQAARIARDAGVSRLFLYH 274 >gi|269960319|ref|ZP_06174693.1| hypothetical protein VME_10770 [Vibrio harveyi 1DA3] gi|269834930|gb|EEZ89015.1| hypothetical protein VME_10770 [Vibrio harveyi 1DA3] Length = 318 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 28/215 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + V++D G Y++ + + +D + +H H DH+ + L GYF ++ P+D Sbjct: 60 GKSRVMIDAGGGVYLRFGQAGGKLEDLDFLGLSHFHTDHVADVPALLKGGYFFDRQDPLD 119 Query: 108 VYAAPD--CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV------- 158 + L + F D+ Y + + P+ + Sbjct: 120 IAGPEAGSAFPSLTGYMKALFDG-DEGAYAYLNGLFDGSDGLFPVTITDVPYKTSQGTKV 178 Query: 159 -----IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-A 208 + + HG + L FR G + D N + ++ + D L++ A Sbjct: 179 YEQDGLTIYALGIPHGDVPCLAFRIESTEGVMVISADQNGSNPDFIDFAKGADILLMPLA 238 Query: 209 LKNGLHSS----HFSLSESLKKIELINPKNAILTH 239 + H S K +NPK +L H Sbjct: 239 IHEEADEVSSFMHAKPSVVGKIAAEVNPKLLVLNH 273 >gi|85857911|ref|YP_460113.1| metal-dependent hydrolase [Syntrophus aciditrophicus SB] gi|85721002|gb|ABC75945.1| metal-dependent hydrolase [Syntrophus aciditrophicus SB] Length = 279 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 +++TH H DH+ G + + + K + +Y P + + + V Sbjct: 64 LIFTHAHWDHLIGFPFFKPIYHR-KTRVTLYGCPYAQASVQQIISRIMTPPNFPVALADV 122 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD---VNAFP 191 + +I + + + G + IP+ + +G+RF + + TD ++ P Sbjct: 123 HADLIFHESCAVPFEIGGMRVTPIPLSHPN---EGIGYRFEEDGKSFVFLTDNELMHHHP 179 Query: 192 -----AESLEKLQNLDFLIIDA 208 + + D LI DA Sbjct: 180 GGMAYEDYCRFARGADLLIHDA 201 >gi|325125558|gb|ADY84888.1| putative metallo-beta-lactamase superfamily [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 309 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG C P R SSL + + E + D G Sbjct: 1 MELEFLGT---------------C-SGQPSKLRNVSSLALKLLDELNEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + + +E + + E H RI S GFR Sbjct: 102 TSLR---ISKTKISYP--IKFVTLEEGGKIVSERG----FEVYTEKLDH-RIDSWGFRI 150 >gi|19112306|ref|NP_595514.1| tRNA endonuclease Trz1 [Schizosaccharomyces pombe 972h-] gi|74644192|sp|P87168|RNZ2_SCHPO RecName: Full=Probable ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|2117299|emb|CAB09123.1| tRNA endonuclease Trz1 [Schizosaccharomyces pombe] Length = 678 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 37/243 (15%) Query: 52 SNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHGIDG-LRGY---FL 100 T +++D G Q R+ + + A+ TH H+DH G+ L+ + Sbjct: 434 DGTVIMLDCGEGAISQFFRQYGTNTEPMLRKLKAIFITHLHSDHYLGLLNVLQAWNKANT 493 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 I++ + L + + + I+ + ++ I Sbjct: 494 NNSMHINIIGPKFLWQWLQR----LKSPANLQALLNRIIFIIAKETVTTPLQLTSDLSIS 549 Query: 161 AIPILQQHGRISSLGF--RFGNVAYCTDVNAFPAESLEKLQ-NLDFL-----IIDALKNG 212 ++P + + S + ++G + Y D P E L K L D LK+ Sbjct: 550 SVPSIHINDSYSCIISHTKYGKLVYSGDTR--PNEKLVKAGIGASLLLHESTFEDDLKHE 607 Query: 213 L-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP--------AFDG 263 H + SE+L + + K ILTH YD P A DG Sbjct: 608 AIQRQHSTASEALSVAQSMKAKALILTHFSQR-SYD--ADFLPPDWTIYPKSKTIYANDG 664 Query: 264 MQF 266 +Q+ Sbjct: 665 LQW 667 >gi|261191546|ref|XP_002622181.1| tRNA processing endoribonuclease Trz1 [Ajellomyces dermatitidis SLH14081] gi|239589947|gb|EEQ72590.1| tRNA processing endoribonuclease Trz1 [Ajellomyces dermatitidis SLH14081] Length = 1154 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 94/328 (28%), Gaps = 110/328 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 631 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 670 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + + + +H HADH G Sbjct: 671 GQLQRAFSPEELREVLRDLKVIWISHLHADHHLGTVSVIRAWHEVTHGALSSTAPVPEPE 730 Query: 92 ------IDGLRGYF------------------LKQKRPIDVYAAPDCMKHLFESFRYCFK 127 + R + + + V A ++F+Y Sbjct: 731 YDLTKLLSEKRLFVASDAKMIEWLAEYSGIENYGFDKLLPVEAD----TSFGDNFKYSHL 786 Query: 128 ALD-----DRTYPPIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQHGR-------ISS 173 + D D P+ + + P ++ A G+ + + H + Sbjct: 787 SRDRQPILDENGNPVKIHLSFNPDRSPFATQLQQATGLSSLLTVPVMHCHGAMATSFVFP 846 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLK 225 GF+ V+Y D P+ ++ D ++ D L++ H + E+L+ Sbjct: 847 SGFK---VSYSGDCR--PSREFARI-GADSTVLIHEATFEDDMLRDAKAKRHSTCGEALR 900 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKST 253 E + +N ILTH + + Sbjct: 901 VAERMRARNVILTHFSQRYAHKPTVPRL 928 >gi|74317118|ref|YP_314858.1| hypothetical protein Tbd_1100 [Thiobacillus denitrificans ATCC 25259] gi|74056613|gb|AAZ97053.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 252 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 50/211 (23%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T V++D G + L + + A++ TH H+DHI G+ L +K Sbjct: 18 EAGATRVLMDCGFGLAESTVRLARLGLKPGDLAAIVVTHEHSDHIGGVGRLA-----RKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V + + V VI+++ A +E P Sbjct: 73 KLPVRLTAGTLAMAND--------------LAGVTVEVIDSHAA-----FALDDLEIQPF 113 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + F FG+ + TD L +D L+++ L+NG + Sbjct: 114 PVPHDAREPVQFVFGDGQRRLGVLTDAGCGTPHIEATLAGVDALVLECNHDAVMLENGPY 173 Query: 215 SS-----------HFSLSESLKKIELINPKN 234 + H +S + + + Sbjct: 174 PASLKRRVGGRFGHLENGQSAALLGKLKHER 204 >gi|300778911|ref|ZP_07088769.1| ribonuclease Z [Chryseobacterium gleum ATCC 35910] gi|300504421|gb|EFK35561.1| ribonuclease Z [Chryseobacterium gleum ATCC 35910] Length = 304 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 12/132 (9%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PID 107 ++D G +Q+ + + I+ + +H H DH G+ GL F R P+ Sbjct: 29 EERLFLIDCGEGTQVQLRKAKARFSKINHIFISHLHGDHCFGLPGLIASFRLLGRENPLH 88 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY K + + F+ + +V + ++ I IE I Sbjct: 89 VYGP----KGIKKMLETIFQITETHRGFEVVYHELDKDYSEKIYED---NRIEVYTIPLD 141 Query: 168 HGRISSLGFRFG 179 H RI G+ F Sbjct: 142 H-RIYCNGYLFK 152 >gi|159042239|ref|YP_001541491.1| beta-lactamase domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921074|gb|ABW02501.1| beta-lactamase domain protein [Caldivirga maquilingensis IC-167] Length = 305 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 98/323 (30%), Gaps = 82/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G + +PR C R + I +++D Sbjct: 6 LKIIFLGSGGA--IPRP------C--------RELPGVLIDVY-----RYRILIDPSEGT 44 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA----PDCMK 116 ++ + L + ++ TH HADH++G+ GL L + P+ V Sbjct: 45 VRRLESIGVSPLKLTHIMVTHLHADHVNGLPGLLATMLMLNRVTPVTVIGPVGISDFTPT 104 Query: 117 HLFESFR------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA--- 161 + SF+ +++D+ + ++NN I ++ G Sbjct: 105 PVNSSFKINVIELKPTSEITLIESMDNLELRYVTTYHTVQNNSYLITLRRPVGTFNPGKA 164 Query: 162 ----IPI----LQQHGRISSL---------------GFRFGNVAYCTDVNAFPAESLEKL 198 IP+ Q G +L G + V Y D + ++ Sbjct: 165 RELGIPVTYWRRIQMGETITLPDGRVIEPSMVMSNVGDKSIKVVYTGDTSP-GDNVVKLA 223 Query: 199 QNLDFLIIDA------LKNGLHSSHF-SLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 ++ LI D+ + H L +L + K +LTHM Y+ Sbjct: 224 KDSSILIHDSTYLPNDSNEAENRGHSTCLDAALD-AKEAGTKLLVLTHMSFRYGYEYYWD 282 Query: 252 STP------SRVVPAFDGMQFSS 268 R V A DGM Sbjct: 283 FLKCASDVFPRTVVAKDGMIIEI 305 >gi|57641713|ref|YP_184191.1| metallo-beta-lactamase superfamily hydrolase [Thermococcus kodakarensis KOD1] gi|57160037|dbj|BAD85967.1| predicted hydrolase, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 271 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 32/211 (15%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP ++ R ++ +DA+ +H H DH ++V Sbjct: 32 RNIYVDPGPGALVRSWRYKLDPRKLDAIFVSHRHVDHC--------------NDLEVMVE 77 Query: 112 PDCMKHLFESF----RYCFKALDDRTYPPIVNPIV--IENNDVPICM-KSAGGVIEAIPI 164 L + D+ P I + +E+ +P K + G E + Sbjct: 78 AMTGGALKKRGVLIASKSVVYGDEEHTPAISQYHINVLESVHIPEPGSKISIGDEELLIT 137 Query: 165 LQQHGRISSLGFR----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHF 218 +H +++GFR G+++Y D F + LI + H Sbjct: 138 PSKHSDPTTIGFRMRTSLGDISYIPDTAYFDDL-VRWHDGARVLIAAITRPRDMGIPYHL 196 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDLDYD 247 S ++++ ++ + P+ +++H+ + + + Sbjct: 197 STDDAVEMLKSMEKKPEVLVMSHIGMKMHFA 227 >gi|94269022|ref|ZP_01291351.1| Beta-lactamase-like [delta proteobacterium MLMS-1] gi|93451375|gb|EAT02235.1| Beta-lactamase-like [delta proteobacterium MLMS-1] Length = 261 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 51/221 (23%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ +++D G + + L + + A+L +H H DHI G L ++ Sbjct: 21 EAGSSRLLIDAGFSGRELESRLAALGVEPGQLTAILLSHEHGDHIRG-----AGVLSRRH 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + + + P+ I+ + G + P Sbjct: 76 HLPLLLNKATLAA---------------AGRELGKPVAIQ--EFTTGRSFTCGDFQIHPF 118 Query: 165 LQQHGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +GF R G + +CTD+ +L L+++ L+ G + Sbjct: 119 ALSHDAAEPVGFLLRAGGRTLGHCTDLGVVSRLVRHRLSGCQALVLECNHDPEMLRQGPY 178 Query: 215 SS-----------HF-SLSESLKKIELINP--KNAILTHMH 241 H + + EL++ + +L+H+ Sbjct: 179 PPALQQRVSSRQGHLANHETATLLTELLHAELRQVVLSHLS 219 >gi|19553174|ref|NP_601176.1| metallo-beta-lactamase superfamily hydrolase [Corynebacterium glutamicum ATCC 13032] gi|62390810|ref|YP_226212.1| hydrolase of metallo-BETA-lactamase superfamily [Corynebacterium glutamicum ATCC 13032] gi|18266923|sp|P54122|RNJ_CORGL RecName: Full=Ribonuclease J; Short=RNase J gi|11967652|emb|CAC19480.1| hypothetical protein [Corynebacterium glutamicum] gi|21324740|dbj|BAB99363.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Corynebacterium glutamicum ATCC 13032] gi|41326148|emb|CAF20311.1| HYDROLASE OF METALLO-BETA-LACTAMASE SUPERFAMILY [Corynebacterium glutamicum ATCC 13032] Length = 718 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 28/153 (18%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + + + +DA++ TH H DHI Sbjct: 176 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IEDHLHRVDALVVTHGHEDHIGA 228 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + I + A+ + + K + R P ++ N D Sbjct: 229 I----PWLLKLRNDIPILASRFTLALIAA------KCKEHRQRPKLIEVNEQSNEDR--- 275 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 G H LG A Sbjct: 276 -----GPFNIRFWAVNHSIPDCLGLAIKTPAGL 303 >gi|325269792|ref|ZP_08136402.1| ribonuclease Z [Prevotella multiformis DSM 16608] gi|324987765|gb|EGC19738.1| ribonuclease Z [Prevotella multiformis DSM 16608] Length = 331 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P + SS + ++D G +Q+ R + I AV +H H Sbjct: 38 CGSALPTLQHFPSSQVVEL-----REKQFLIDCGEGTQIQLRRLHIRFSRIIAVFISHLH 92 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G+ F R P+ +YA L + + + L + Sbjct: 93 GDHCFGLPGMLSTFGMTGRTAPLHLYAPATFEPVLRQMLDFFCQNLGFEVVY-----HPV 147 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + +E +P+ RI G+ F Sbjct: 148 DTTLHRVVYEDRSLTVETVPLQH---RIECCGYLF 179 >gi|288554577|ref|YP_003426512.1| metallo-beta-lactamase family protein YycJ [Bacillus pseudofirmus OF4] gi|288545737|gb|ADC49620.1| metallo-beta-lactamase family protein YycJ [Bacillus pseudofirmus OF4] Length = 264 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 54/254 (21%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S + + ++VD G D + +D +L +H H+D Sbjct: 3 LRFSVLASGSTGNAIYVEADDKKLLVDVGLSGKKMDELFTEIGRNPKELDGILVSHEHSD 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ +K + ++A + + P + + Sbjct: 63 HIKGVG-----VFARKHKLPIFANEKTWLAMENNLGTI----------PTDQKFIFATEE 107 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 V + G ++ H + + F + TD+ ++ D Sbjct: 108 VK-----SFGGLDVESFGVSHDAAEPMFYCFHHAGKKLVLATDMGYVSERIKGTIKGADM 162 Query: 204 LI------IDALKNGLHS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 I ++ L+ G + H S + +L ++I N L H+ +D Sbjct: 163 YIFESNHDLNMLRMGRYPWNVKRRILSDVGHVSNEDAALALSDVISDNTSRIYLAHLSLD 222 Query: 244 LDYDMVLKSTPSRV 257 + + + T +V Sbjct: 223 NNMKDLARLTVEQV 236 >gi|239979060|ref|ZP_04701584.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces albus J1074] Length = 96 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR C R ++L + + ++++D P Sbjct: 1 MELTLLGTGAPEGLPRPDCPCAVCATALGDAARAATALLV--------DGSLLLDLTPGI 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R + + VL +HPH Sbjct: 53 AFAAARAGHTLGQVRQVLLSHPH 75 >gi|168185972|ref|ZP_02620607.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] gi|169295894|gb|EDS78027.1| metallo-beta-lactamase domain protein [Clostridium botulinum C str. Eklund] Length = 240 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 82/262 (31%), Gaps = 79/262 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G+S L +G T+I++ G + Sbjct: 1 MKLKVLGSGSSG----------------------NCYLL------QGKEETLILECGLPY 32 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + L ++ ++ L TH H DH + L + IDVY + + Sbjct: 33 KTILKGLNFKIGNVVGCLVTHEHKDHSKAANDLI------RNGIDVYLSQGTAAGIE--- 83 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 F ++ +++ G +P +H LGF Sbjct: 84 ---FIDINRS----------HRIHEIKSEKVFKIGEFIILPFKTEHDAAEPLGFLIQHLE 130 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---------------LKNGLHSSHF---S 219 + + TD K ++D ++I+ LK+ + SHF + Sbjct: 131 MDQLLFITDSYY----CRYKFSDIDHVLIECNYSDEILKERKLPQKLKDRIIKSHFELEN 186 Query: 220 LSESLKKIELINPKNAILTHMH 241 + E LK +L K +L H+ Sbjct: 187 VKEFLKATDLKGTKEIVLIHLS 208 >gi|25028958|ref|NP_739012.1| hypothetical protein CE2402 [Corynebacterium efficiens YS-314] gi|23494245|dbj|BAC19212.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 255 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 82/289 (28%), Gaps = 59/289 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG +S VP NP S +S ++++D GP Sbjct: 1 MRLTILG--SSGSVPAPG---------NPA-----SGYLVSSPGAP----SLLMDMGPGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + Q + V ++H H DH L + R YA Sbjct: 41 LAALQKIQDPTDTHVAFSHLHTDHCADFASLLVW-----RRFHPYAPAPGRNL------- 88 Query: 125 CFKALDDRTYPPIV---NPIVIENNDVPICM-------KSAGGVIEAIPILQQHGRISSL 174 CF D + +P I++ P H I + Sbjct: 89 CFGPTDTPNRLGRLSSDDPEGIDDMADTFAFSPWVSGQPELVDKFTVTPFRVVH-PIQAY 147 Query: 175 GFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSES 223 R +AY D +A+ ++ +++D + + H ++ Sbjct: 148 AMRVEEHGTGATLAYSGD-SAYTEALIDAARDVDVFLCETTWGPSCEGKIPGMHICGQDA 206 Query: 224 LKKIELINPKNAILTHMHVDLDYD---MVLKSTPSR-VVPAFDGMQFSS 268 + K I+TH+ D + + GM+ + Sbjct: 207 GQIAAAAGVKKLIVTHVPPWADKEATLAAAAQYYDGPIELGVPGMEMTI 255 >gi|294794051|ref|ZP_06759188.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] gi|294455621|gb|EFG23993.1| metallo-beta-lactamase family protein [Veillonella sp. 3_1_44] Length = 268 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 32/172 (18%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L+ + ++ + +H H+DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELQIDMAQVEGIFVSHEHSDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNRLIELTKGSLTL----GSLIVEPFSV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 H +G TD + L ++ + L+++A H Sbjct: 124 SHDAADPIGINVFAGNDKATIVTDTGVISDDILRRIDDTTLLVLEA-NYDPH 174 >gi|91215640|ref|ZP_01252610.1| ribonuclease Z [Psychroflexus torquis ATCC 700755] gi|91186106|gb|EAS72479.1| ribonuclease Z [Psychroflexus torquis ATCC 700755] Length = 303 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P+ ++ + E +++D G Sbjct: 2 MQLTILG----------------CHSATPRANAHPTAQILDINGEL-----MLIDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFE 120 +Q+ +++V + + +H H DH G+ GL F L + + ++A + L Sbjct: 41 QVQLRKQKVKFSRLSHIFISHLHGDHYFGLIGLLSTFSLLSRTAELHIHAPKGLEEILKL 100 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F+ + +YP + + ++ + + + +E IP+ RI + GF F Sbjct: 101 QFK---ASHSYMSYP--LIFHTLSSSKSEMILDNEKLTVETIPLDH---RIYTNGFLFK 151 >gi|78046660|ref|YP_362835.1| hypothetical protein XCV1104 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035090|emb|CAJ22735.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 249 Score = 55.5 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGMRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLQGALVWTGDTRPIPEMLKRYADDGELIAHDC---GVHGNPSHTGVDD 197 >gi|270307793|ref|YP_003329851.1| metallo-beta-lactamase [Dehalococcoides sp. VS] gi|270153685|gb|ACZ61523.1| metallo-beta-lactamase [Dehalococcoides sp. VS] Length = 258 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 19/176 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 TR S + V++D G + E++ ++ AV+ +H H DHI + L Sbjct: 16 TRPSCLMLSGG-------VVLDAGA-ITSSLTLEELYNLKAVILSHAHYDHIKDVPLLAM 67 Query: 98 YFLKQKRPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + +D+Y + + + + F F D T PP + +++ ++ + Sbjct: 68 NLAYGLKSVDIYGSEAVQEVVTQPPFSGGF-YPDFFTRPPSAP--ALRFHEITPGLEFSC 124 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA-----YCTDVNAFPAESLEKLQNLDFLIID 207 + +P+ H R + GF + Y +D A + +++ + LII+ Sbjct: 125 ENYQILPLSVPHSR-DTTGFLVKDAGGHSFFYTSDTGAGLGDVWKQIS-PELLIIE 178 >gi|145295874|ref|YP_001138695.1| hypothetical protein cgR_1799 [Corynebacterium glutamicum R] gi|140845794|dbj|BAF54793.1| hypothetical protein [Corynebacterium glutamicum R] Length = 718 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 28/153 (18%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + + + +DA++ TH H DHI Sbjct: 176 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IEDHLHRVDALVVTHGHEDHIGA 228 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + I + A+ + + K + R P ++ N D Sbjct: 229 I----PWLLKLRNDIPILASRFTLALIAA------KCKEHRQRPKLIEVNEQSNEDR--- 275 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 G H LG A Sbjct: 276 -----GPFNIRFWAVNHSIPDCLGLAIKTPAGL 303 >gi|118466764|ref|YP_880791.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Mycobacterium avium 104] gi|118168051|gb|ABK68948.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Mycobacterium avium 104] Length = 254 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 65/202 (32%), Gaps = 30/202 (14%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VY 109 +++D G + R S VL +H HADH + GL + ++ P +Y Sbjct: 28 LVIDFGGGVLGALQRYADPSSVHVLLSHLHADHCLDLPGL--FVWRRYHPTRPLGKAMLY 85 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQ 167 D L Y ++ + + G + P + Sbjct: 86 GPGDTWSRL---------GAASSPYGGEIDDCSDIFDVRHWVDGEPVTIGGLTVTPRVVA 136 Query: 168 HGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHF 218 H S G R + Y D A + +E + D + +A + + H Sbjct: 137 HPT-ESYGLRVTDHTGASFVYSGDTGAC-DQLVELARGADVFLCEASWTHSPDRPPALHL 194 Query: 219 SLSESLKKIELINPKNAILTHM 240 S +E+ + +LTH+ Sbjct: 195 SGTEAGRAAAQAGVHELLLTHI 216 >gi|313472812|ref|ZP_07813300.1| VicX protein [Lactobacillus jensenii 1153] gi|313448887|gb|EEQ68010.2| VicX protein [Lactobacillus jensenii 1153] Length = 270 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G D QV + ID +H H+DH G+ G +++ Sbjct: 20 EKHKILMDAGLSGKKIKDLLAQV-GVDINDIDMAFLSHDHSDHSKGL----GVLMRRYPQ 74 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I+ +A K+L + + P+ IE V + +E Sbjct: 75 INAFANSGTWKYLIDE--------NKVGKLPVEQINTIEPGQVK-----SFDDLEIQAFA 121 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII----DA--LKNGLHS 215 H + F + + TD + + +++ D ++ D L+NG +S Sbjct: 122 TSHDAAQPQYYVFSSAGKRITFLTDTGYVSEKVRDVIKDSDAYMLEFNYDTELLRNGSYS 181 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVD-----LDYDMVLKST 253 H S ++ + E + K+ LTH L +D ++ + Sbjct: 182 WQLKKRIMSDYGHLSNEQASEVFEDVLTAKTKHIFLTHRSQHNNTLRLAHDTLVNNL 238 >gi|188578342|ref|YP_001915271.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522794|gb|ACD60739.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv. oryzae PXO99A] Length = 228 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 5 ERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 64 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 65 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 120 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 121 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELIAHDC---GVHGNPSHTGVDD 176 >gi|124006394|ref|ZP_01691228.1| coenzyme PQQ synthesis protein B, putative [Microscilla marina ATCC 23134] gi|123988051|gb|EAY27722.1| coenzyme PQQ synthesis protein B, putative [Microscilla marina ATCC 23134] Length = 330 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 89/275 (32%), Gaps = 52/275 (18%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVD 59 K + +LG G P+ C N ++ SL + ++ +++ Sbjct: 41 KAQQYLVVLGIAQDAGYPQAGCTKDCCKDVWQNTHKKKLAVSLGV---VDQQEGKKWMIE 97 Query: 60 TGPDFYMQV------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 PDF Q+ + + + TH H H G+ L + + + VY P Sbjct: 98 ATPDFREQLQVLNKFQASKSMLPQGIFLTHGHIGHYSGLIHLGREAIGAQG-VSVYVMPR 156 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQH-GRI 171 ++L ++ + +VN I + I+ PI H G Sbjct: 157 MRQYLT----------NNGPWSQLVNLKNIHLQPIQADSSLQLSQQIQITPIQVPHRGEF 206 Query: 172 -SSLGFRFGN----VAYCTDVNAFPAESL---EKLQNLDFLIIDALKNG----------- 212 ++G++ V + D+N + L E ++ +D +ID Sbjct: 207 TETVGYQIKGSKKTVLFIPDINKWQKWELKLTEVIKTIDIALIDGTFYKNGEIANRDMSQ 266 Query: 213 -LHSSHFSLSESLKKIELINPK----NAILTHMHV 242 H + E+ ++ + P H++ Sbjct: 267 IPHPF---VEETTALLKDM-PTSEKSKVYFIHLNH 297 >gi|13542061|ref|NP_111749.1| ribonuclease Z [Thermoplasma volcanium GSS1] gi|41017575|sp|Q979A8|RNZ_THEVO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z Length = 304 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 72/289 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G G S P P V + + + D Sbjct: 1 MASNIKIVFFGTGGSWPTPI---------RAMP------------GVGIQIDDVFNLFDC 39 Query: 61 GPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+++ +SID + TH H DH G+ GL F + + ++++ + Sbjct: 40 GEGTQKQIMKSKWSFMSIDNIFITHFHGDHFLGLIGLVQSMSFNNRTKDLNIFGPRGAIG 99 Query: 117 HLFE---------SFR---YCFKALDDRTYPPIVNPIVIENNDVPIC------------- 151 + FR Y + + + ++ VP Sbjct: 100 IISNAINIGYYTLRFRINVYELEPDKTYDLGKFLLKTTLNDHPVPALSYTIEEKDIIRVD 159 Query: 152 ---MKSAGGVIEAIPILQQHGRIS-----------SLGFRFGN-VAYCTDVNAFPAESLE 196 K G + I ++ +G S G R G + Y D + + Sbjct: 160 PQKAKELGIPSKIIEKIRDNGTYEYRGRKYSIDEISGGIRKGRKIVYTGDTKPM-QKMAD 218 Query: 197 KLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 ++ D LI D + H S ++ + L H Sbjct: 219 FAKHADVLIHDTTTDSSFEPAVNQFGHSSAKQAARIARDAGVSRLFLYH 267 >gi|119872009|ref|YP_930016.1| hypothetical protein Pisl_0495 [Pyrobaculum islandicum DSM 4184] gi|119673417|gb|ABL87673.1| conserved hypothetical protein [Pyrobaculum islandicum DSM 4184] Length = 235 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 76/216 (35%), Gaps = 25/216 (11%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ +++D G Y +V++ + D + +H H DHI G+ + + + + A Sbjct: 26 TDINILLDVGECTYARVIQCNLPWPDLIFISHRHGDHILGLPTFMLMAKRLGKKLKIIAN 85 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVN-PIVIENNDVPICMKSAGGVIEAIPILQQH-G 169 + ++ ++ + Y + + + I+ + + +H G Sbjct: 86 RETLEA-AKALAIATGIENTLQYVEFLEATREVTMGQTRLRFAKTSHPIDTLAVRIEHEG 144 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHS-SHFSLSES 223 + ++ Y +D +E + D LI + ++ +H H + ++ Sbjct: 145 KCAT---------YSSDTAP-ADVVVELARGCDILIHEVSGNPGQEDEVHRVGHSTTVDA 194 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 ++ + K M + + L P + Sbjct: 195 IEISKRAGVK------MLIPFHFYTELPIVPPGITV 224 >gi|90022265|ref|YP_528092.1| beta-lactamase-like protein [Saccharophagus degradans 2-40] gi|89951865|gb|ABD81880.1| beta-lactamase-like protein [Saccharophagus degradans 2-40] Length = 258 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 64/222 (28%), Gaps = 68/222 (30%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG---PDFYM 66 LG G+S I ++VD G D Sbjct: 6 LGSGSSGNATVIACGDVV----------------------------LLVDCGFGIKDTER 37 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 ++ R + I A++ TH H+DHI G+ L +K + VY Sbjct: 38 RLARLGLEAKDISAIVVTHEHSDHIKGVAPLA-----RKYKMPVYMTRGTFLA------- 85 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----G 179 R Y I + +IEN + + P+ H + G Sbjct: 86 -------REYGNIPSLHLIEN-----YQPFSIAHLTVTPVAVPHDAREPAQYTITSPDYG 133 Query: 180 NVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS 215 + TD+ +E D L+ +D L G + Sbjct: 134 VLGVLTDLGYITPHVVEAYLTCDALLVEANHDLDMLARGPYP 175 >gi|32474751|ref|NP_867745.1| hypothetical protein RB7292 [Rhodopirellula baltica SH 1] gi|32445290|emb|CAD75292.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 256 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 40/239 (16%) Query: 56 VIVDTGPD-FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAA 111 V++D G F + L E +D +L +H H DH+ G+ L + +RP+ V+ Sbjct: 32 VLLDAGTGIFRLPKLIE-TDHLD-ILLSHAHLDHVVGLTFLLD--ILHQRPVKEVCVWGQ 87 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + + + E + F + P+ P+ D G + P G + Sbjct: 88 REKLAAIRE---HLFHE----SLFPVAIPVTWHAIDDQSTCDLHGTEMSWRPQEHPGGSV 140 Query: 172 SSLGFRFGN-------------VAYCTDVNAFPA-ESLEKLQNLDFLIIDA------LKN 211 +R + Y TD ESL + D L+ + K Sbjct: 141 ---AYRLHTPRPESSASDPPAVLVYATDTLGEDDPESLRWMSGADLLMHECNFDNQNQKW 197 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + H L + L P+ +LTH++ +L+ +S + A DG+ + Sbjct: 198 AEKTGHCYLRKVLDIAGQTKPRRLLLTHINPIAELEIGDEGQSLDCPIEIATDGLSVAF 256 >gi|332140464|ref|YP_004426202.1| beta-lactamase-like protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550486|gb|AEA97204.1| beta-lactamase-like protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 280 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 91/290 (31%), Gaps = 62/290 (21%) Query: 5 YHFTILGCGASLGVP-----RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 T G S+ P R G+ AC + I T +++D Sbjct: 1 MRLTFYGVRGSIPTPGAAFVRYGGN-TAC-------------VHIELE----DGTDIVLD 42 Query: 60 TGPDFYMQVLREQVLSID---AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +G +L E + + +L +H H DHI G + +R I++Y Sbjct: 43 SGTGIR--LLGEHLAKKNTPIHLLLSHNHWDHIQGFPFFPPI-YQAEREINIY-PGQT-- 96 Query: 117 HLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 LFE K ++ +P + + A G + + H S Sbjct: 97 -LFEEPDQILKQMEGSLFPVPRSALRANISLIEIPKADNTFAIGSAKITRLAMNHPGSGS 155 Query: 174 LGFRFG----NVAYCTDVNAFPAESLE--------KLQNLDFLIIDA---LKNGLHSS-- 216 + VAY TD +P E +N D LI DA L + + Sbjct: 156 -AYCINADGVKVAYITDNELYPPYKKETDFIDFAKFAENADLLIHDAQYMLSDMPAKNGW 214 Query: 217 -HFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPA 260 H E++K N K L D D D V+K V A Sbjct: 215 GHSVAEEAVKLAMASNAKKLAL--YSHDPERTDDDIDDVVKHCNEYVTVA 262 >gi|331694612|ref|YP_004330851.1| coenzyme PQQ biosynthesis protein B [Pseudonocardia dioxanivorans CB1190] gi|326949301|gb|AEA22998.1| coenzyme PQQ biosynthesis protein B [Pseudonocardia dioxanivorans CB1190] Length = 297 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 102/309 (33%), Gaps = 61/309 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDP----TNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ C + P RT+S + +S +R +++ P Sbjct: 3 LQVLGSAAGGGFPQWNCGCPGCRAVRDGSRPARPRTQSCVAVSADRQRW----FLLNASP 58 Query: 63 DFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 D QV L + AVL T DH L++ ++V+A Sbjct: 59 DVRSQVEAFPPLQPRAGRATPLGAVLLTDGELDHTL-----GLLLLREAERLEVHATEAV 113 Query: 115 MKHLFESFR-------YC---FKALDDRTYPPIVNPIVIENNDVPICM--KSAGGVIEAI 162 L + YC + + P+ + + DVP + GG +E Sbjct: 114 AATLRDGSGVLATLERYCDVDLRTVVPGVDVPLADGLTYRAFDVPTTKRARFGGGPLEGR 173 Query: 163 PILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLEKLQNLDFLIIDA--------LKNGL 213 + G + G R G A + + ++ L +D ++ GL Sbjct: 174 VV----GYRLTDG-RSGRAAVHLPGMQRLTPQVRAEIDGCACLFLDGTCWDDDELIRLGL 228 Query: 214 HSS------HFSL---SESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVP 259 + H ++ SL+++ ++ + I HM+ D T + Sbjct: 229 AAKTSQEMGHLAIGGPGGSLEQLAGLDVERTIYIHMNNTNPVLLEDSAQRRTLTDRGLDV 288 Query: 260 AFDGMQFSS 268 A DG++ Sbjct: 289 AEDGLEVKV 297 >gi|18976585|ref|NP_577942.1| hypothetical protein PF0213 [Pyrococcus furiosus DSM 3638] gi|18892148|gb|AAL80337.1| hypothetical protein PF0213 [Pyrococcus furiosus DSM 3638] Length = 270 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 28/214 (13%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP +++ R ++ +D + +H H DH + Y Sbjct: 32 KNIYVDPGPGALVRMWRYKIDPRKVDVLFISHRHTDHCN---DAEVLVEGM-----TYG- 82 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQH 168 K D+ P + + E + + G E I H Sbjct: 83 -VTKKRGTLIGSKSVVHGDENHTPALSKYHLDALEEVHAPNPGDRFKIGEDEMIITPSLH 141 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHFSLSE 222 +++GFR G+++Y D F E ++ +I + H S + Sbjct: 142 SDPTTIGFRLKTSYGDISYIPDTEYF-EELVKWHDGARVIIAAVTRPRDMRIPFHLSSED 200 Query: 223 SLKKIELI--NPKNAILTH----MHVDLDYDMVL 250 ++ ++ + P+ I+TH MH Y Sbjct: 201 AVYLLKSMKQKPEVFIMTHAGMKMHFAGPYKEAQ 234 >gi|330991349|ref|ZP_08315300.1| Coenzyme PQQ synthesis protein B [Gluconacetobacter sp. SXCC-1] gi|329761368|gb|EGG77861.1| Coenzyme PQQ synthesis protein B [Gluconacetobacter sp. SXCC-1] Length = 307 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 108/323 (33%), Gaps = 80/323 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNR----RTRSSLKISRVSERGSNTTVIVDTGP 62 +LG A G P+ + C + RT++S+ IS + +V+ P Sbjct: 4 IIVLGAAAGGGFPQWNSNAPGCRRARAGDPAALPRTQASIAISGDGKNW----FVVNASP 59 Query: 63 DFYMQVLR-------EQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 D Q+ + E + S I V+ T D I G+ L++++P ++ A P+ Sbjct: 60 DLRTQINQTPALHPSEGLRSTPIAGVILTGGEVDTITGL-----LTLRERQPFELLATPE 114 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQHGR 170 + L + F+AL+ V D P+ +K G + +P G+ Sbjct: 115 VLSMLDANP--IFEALNR-----AVVTRTPMGLDQPLTLKLPDGSPAGLTIVPFAVP-GK 166 Query: 171 IS-----------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 + ++G + V + +L+ D + D Sbjct: 167 VPLYAESGPDPAAICENGETIGLEISDGSHRVCFVPGCARMTDNLRVRLRGADAVFFDGT 226 Query: 210 --------------KNGLHSSHFSLSE---SLKKIELINPKNAILTHMHVDLDYDMVLKS 252 K G H S+ ++ + + + I H++ ++L Sbjct: 227 LWVDDEMVRAGLGEKTGRRMGHMSMDGMDGTIAALRDLGIRRRIFIHINNSNP--VLLAD 284 Query: 253 TPS-------RVVPAFDGMQFSS 268 +P + DGM+ ++ Sbjct: 285 SPERAQVEAAGWEISHDGMRITA 307 >gi|304393838|ref|ZP_07375763.1| beta-lactamase domain protein [Ahrensia sp. R2A130] gi|303294037|gb|EFL88412.1| beta-lactamase domain protein [Ahrensia sp. R2A130] Length = 284 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 27/182 (14%) Query: 78 AVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + +TH H DHI + +F +D K + + + + Sbjct: 75 HLFFTHCHYDHISALPFFGPFFDPTVTVNLWSGHLD--GPDKTRKMVENYMKPPYFPVGP 132 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--FGN--VAYCTDV 187 + + E D + + I H +G+R F + + Y TD Sbjct: 133 EVFSATLAYRDFEAGDELEPIP----DVTVKTISLNHHD-KCIGYRVEFDDRAICYMTDT 187 Query: 188 NAFPAE----SLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAIL 237 P E +E ++ D +I DA + H + E ++ + + + L Sbjct: 188 THIPGEPDQNIIEACRDADLMIYDATYTDEEFPQFWNFGHSTWQEGVRLAKAASAERLCL 247 Query: 238 TH 239 H Sbjct: 248 FH 249 >gi|295110706|emb|CBL24659.1| RNAse Z [Ruminococcus obeum A2-162] Length = 303 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 97/320 (30%), Gaps = 79/320 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P +R ++ + R + +++++D G Sbjct: 2 LDLCLLGCGGMMPLP----------------KR-----WLTALMTRYNGSSLLIDCGEGT 40 Query: 65 YMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA---PDCMK 116 ++E+ ID + +TH H DHI G+ GL + P+ + + Sbjct: 41 -QVAIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTLVGPKGLERVVN 99 Query: 117 HLFESFRYC-FKALDDRTYPPI----VNPIVIENNDVPICMKSAGGVIEA---------- 161 L F+ P +N I V + G IE Sbjct: 100 ALRVIAPELPFEIKFIEVTKPFEVLELNGYRINAFRVNHNVICYGYTIEILRQGKFSPER 159 Query: 162 -----IPI----LQQHGR-ISSLGF-----------RFG-NVAYCTDVNAFPAESLEKLQ 199 IP+ Q GR I + G R G V Y TD L Sbjct: 160 AREQEIPLKYWNPLQKGRTIEADGVVYTPDMVLGPDRKGIKVTYTTDTRP-TESILRNAV 218 Query: 200 NLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL----DYDM 248 N D I D ++ H + E+ + K LTH L +Y Sbjct: 219 NSDLFICEGMYGEEDKIEKAKGYKHMTFREAATLAKDAGVKELWLTHYSPSLIRPDEYMD 278 Query: 249 VLKSTPSRVVPAFDGMQFSS 268 +++ P DG Sbjct: 279 MVRGIFPNAWPGKDGKSVEL 298 >gi|8922122|ref|NP_061166.1| zinc phosphodiesterase ELAC protein 1 [Homo sapiens] gi|41017799|sp|Q9H777|RNZ1_HUMAN RecName: Full=Zinc phosphodiesterase ELAC protein 1; AltName: Full=Deleted in Ma29; AltName: Full=ElaC homolog protein 1; AltName: Full=Ribonuclease Z 1; Short=RNase Z 1; AltName: Full=tRNA 3 endonuclease 1; AltName: Full=tRNase Z 1 gi|10946491|gb|AAG24917.1|AF308695_1 ELAC1 [Homo sapiens] gi|8574425|dbj|BAA96799.1| D29 [Homo sapiens] gi|15779120|gb|AAH14624.1| ElaC homolog 1 (E. coli) [Homo sapiens] gi|119583388|gb|EAW62984.1| elaC homolog 1 (E. coli), isoform CRA_b [Homo sapiens] gi|123985170|gb|ABM83711.1| elaC homolog 1 (E. coli) [synthetic construct] gi|123998805|gb|ABM87031.1| elaC homolog 1 (E. coli) [synthetic construct] Length = 363 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 89/337 (26%), Gaps = 122/337 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLR 100 Query: 116 KHLFES---------FRYC------------------FKALDDRTYPPIVNP--IVIENN 146 ++ + F Y F ++ PP ++ ++ Sbjct: 101 DFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDS 160 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGF------RFGNV--------------AY--- 183 + + H RI S GF R G + AY Sbjct: 161 EENSYLLFDDEQFVVKAFRLFH-RIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKL 219 Query: 184 -------------------------------CTDVNA-FPAESLEKLQNLDFLIIDAL-- 209 D + ++ D LI +A Sbjct: 220 KNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLD 279 Query: 210 -----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 K H H + + +L K +LTH Sbjct: 280 DAQMDKAKEHG-HSTPQMAATFAKLCRAKRLVLTHFS 315 >gi|121604101|ref|YP_981430.1| beta-lactamase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120593070|gb|ABM36509.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 257 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 32/162 (19%) Query: 55 TVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G VLR + I AV TH H DHI L + I V+ Sbjct: 27 RILIDCGLGIRQLVLRLAEVDLRPEDIHAVFITHEHGDHIG-----CALTLALRHRIPVW 81 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + P ++ D G ++ +P H Sbjct: 82 MSQGTHSAI---------------GAPDFEGLLHTARDEK---AIDLGGLQLMPFTVPHD 123 Query: 170 RISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 L + + TD+ + LQ D L+++ Sbjct: 124 AREPLQLSCTDGSAKLGILTDLGHATPHVMAHLQACDALLLE 165 >gi|13472837|ref|NP_104404.1| hypothetical protein mlr3257 [Mesorhizobium loti MAFF303099] gi|14023584|dbj|BAB50190.1| mlr3257 [Mesorhizobium loti MAFF303099] Length = 284 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 81/249 (32%), Gaps = 35/249 (14%) Query: 50 RGSNTTVIVDTGPDFYM--QVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R T++ D G + LR V D +L+TH H DHI G+ + + + + Sbjct: 37 RCGKHTLLFDAGSGLQPAGRALRASGVTDFD-LLFTHCHYDHIIGLPFFAPIYDRSVK-V 94 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV--PICMKSAGGVIEAIPI 164 +++ + F + ++ D ++ GV+ Sbjct: 95 TLWSGHLAGRMTTRQMVDEFMQPPWFPVKLEICKASLDCRDFVSGDVLRPREGVVVRTGS 154 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAE----SLEKLQNLDFLIIDAL------- 209 L G +G+R VA TD P + L ++ D +I D Sbjct: 155 LVHPG--GCIGYRVEWGGRVVAVITDTEHEPDKLDQAVLGLIEGADLVIYDCTYTEEEME 212 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL--------DYDMVLKSTPSRVVPAF 261 + H H + + +K E + L H D + + + K + A Sbjct: 213 RRSGHG-HSTWQQGVKLCEAAGARGLAL--FHHDPARTDEELDEIEKLAKDRFAGAFAAR 269 Query: 262 DGMQFSSPI 270 DG P+ Sbjct: 270 DGQTLKFPV 278 >gi|313202787|ref|YP_004041444.1| RNAse z [Paludibacter propionicigenes WB4] gi|312442103|gb|ADQ78459.1| RNAse Z [Paludibacter propionicigenes WB4] Length = 304 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 90/295 (30%), Gaps = 93/295 (31%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 TILGCG+++ P + SS + + ++D G ++ Sbjct: 7 TILGCGSAM----------------PTRKNFPSSQLLEI-----RDKQYMIDCGEGTQIR 45 Query: 68 VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFESFR 123 + + V + + +H H DH G+ GL F L + + ++A PD K + + Sbjct: 46 MCQTGVKTNRLGHIFISHLHGDHCFGLIGLISTFGMLNRTAELHIHAQPDLEKIMQPQLQ 105 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y L +NP E M I I +H R+ GF F Sbjct: 106 YFCADLSFNVVFHSINPRKHE-------MIFEDRSIRVFSIPLKH-RVPCCGFLFEEKAR 157 Query: 180 -------------------------------------------------NVAYCTDVNAF 190 AYC+D A+ Sbjct: 158 DRHIIREMIDFYKIPTWRIPKIKQGEDFETEEGEIIPNEQLTRESTPPKRFAYCSDT-AY 216 Query: 191 PAESLEKLQNLDFLIIDA-LKNGLH-----SSHFSLSESLKKIELINPKNAILTH 239 + + + N+D L +A H + H + ++ N K I+ H Sbjct: 217 SEKIIPIISNVDCLYHEATFMEDEHVRSKQTEHSTARQAGTIALKANVKKLIIGH 271 >gi|145342772|ref|XP_001416263.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576488|gb|ABO94556.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 311 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 26/97 (26%) Query: 1 MKDYY---HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVI 57 MK + T LG S G P T R SS+ + +E + Sbjct: 1 MKSNFSGAELTFLGT--SSGAPSFT--------------RNVSSVALRLENEVW-----L 39 Query: 58 VDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 D G Q++R ++ I + TH H DHI G+ Sbjct: 40 FDCGEATQHQLMRSKLKYAKITRIFITHMHGDHIFGL 76 >gi|332039754|gb|EGI76154.1| beta-lactamase-like protein [Hylemonella gracilis ATCC 19624] Length = 294 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 44/227 (19%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-----LKQK 103 + +I+D G Q L + + TH H DHI G+ F L+ Sbjct: 34 DEDDIIILDAGTGIFPLSQSLMTRQPVHANIFITHSHWDHIQGLPFFIPNFVAGNVLRLH 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 D + + + +Y + + + V + + ++ G P Sbjct: 94 GAYDPVSGQGVEQVMSVQLQYSYFPVREAELRGRVEYVTLTPDE-----SVRVGSATITP 148 Query: 164 ILQQHGRISSLGFRFGNVA-------------------------YCTDVNAFPAESLEKL 198 L H I+ G+R + Y VN A + + Sbjct: 149 CLLNHPVIN-YGYRIESNGKSVFFTGDHEPPYNIYQPGDLEYAEYQHHVNDRDAAIVRGM 207 Query: 199 QNLDFLIIDALKN-GLHSS-----HFSLSESLKKIELINPKNAILTH 239 Q +D LIID + S H + + S K TH Sbjct: 208 QGVDVLIIDTSYTAAEYPSKIGWGHGTYASSFDYASRAGAKVLYCTH 254 >gi|325955204|ref|YP_004238864.1| ribonuclease Z [Weeksella virosa DSM 16922] gi|323437822|gb|ADX68286.1| Ribonuclease Z [Weeksella virosa DSM 16922] Length = 310 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG + S ++ +SER ++D G Sbjct: 3 LELTILG---------YNSALPTANSH--------PSAQVLNISER----YFLIDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFE 120 +Q+ R ++ I+ V TH H DH+ G+ GL F L +++PI V+ + + Sbjct: 42 QVQLRRARLKFSKINHVFITHMHGDHVFGLIGLLSSFQLLGREKPITVHGPKGIEEFITI 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + PI+ +E N+ + + +++ IP+ RI + G+ F Sbjct: 102 QM----RLSGSYHGFPIL-FNELEGNESKVIFEDDKVLVKTIPLDH---RIYTNGYLFQ 152 >gi|269926058|ref|YP_003322681.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269789718|gb|ACZ41859.1| beta-lactamase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 267 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 52/221 (23%) Query: 50 RGSNTTVIVDTGPDFYMQ---VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G +L V ++ + TH H+DHI GI+ L ++ Sbjct: 4 QWEGKAILIDAGISARKLTTYLLERNVSPENLLGIFVTHEHSDHIAGIE-----LLAKRF 58 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 V + K L + ++ Y + I ++ +E Sbjct: 59 DTPVLCTEETRKVL----SWLIDGVEYEVYK----------KEQSIEIEG----LEIQAF 100 Query: 165 LQQHGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ R+G V+ TD+ A +++ + D ++I+A L +G + Sbjct: 101 SLPHDAADPVGYQIRYGEYAVSVITDLGAPTLDAVSAARTSDLVVIEANHDVDRLISGPY 160 Query: 215 S-----------SHFSLSESLKKIE---LINPKNAILTHMH 241 H S ++ + I P+ L H+ Sbjct: 161 PWHLKKRIMSDRGHLSNLQAAQLISSALRPRPQQFWLAHLS 201 >gi|119872614|ref|YP_930621.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674022|gb|ABL88278.1| beta-lactamase domain protein [Pyrobaculum islandicum DSM 4184] Length = 640 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 20/96 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLRE-QVLSIDAVLYTHPHADHIH 90 RS++ +S + + +++D G DF +L + +DAV+ TH H DH+ Sbjct: 193 RSAILVST-----TESNILLDCGLKPGQYDEDFP--LLDAVDIDRLDAVVLTHAHMDHVG 245 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDC-MKHLFESFRYC 125 + K VY + Y Sbjct: 246 ----CLPFLYKYGYRGPVYMTDPTKYQTFILLMDYI 277 >gi|319650112|ref|ZP_08004261.1| hypothetical protein HMPREF1013_00866 [Bacillus sp. 2_A_57_CT2] gi|317398293|gb|EFV78982.1| hypothetical protein HMPREF1013_00866 [Bacillus sp. 2_A_57_CT2] Length = 247 Score = 55.5 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 80/224 (35%), Gaps = 51/224 (22%) Query: 46 RVSERGSNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 ++ R TT++VD G ++L + SI A+ TH H+DH+ G+ L Sbjct: 14 CIALRSGETTILVDAGVAKTKIEKRLLEVGIRPDSIRAIFITHAHSDHVKGLP------L 67 Query: 101 KQKRPIDVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 K I VYAA K + + + FKA +D ++ IE+ G Sbjct: 68 ANKYKIPVYAAEGEWKDIQGVDDDLQRAFKAGEDIN----LDDYFIESFKTHHDAMDPVG 123 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKN 211 + HG + C D E L ++ + II+A L+ Sbjct: 124 YVV-------HGHDG------EKCSICLDTGHVDQEMLTAMEFSNIYIIEANHEPAMLEY 170 Query: 212 GLHSS-----------HFSLSESLKKIELIN---PKNAILTHMH 241 + + H S ++ + + + + LTH+ Sbjct: 171 SDYPNSVKARILSNVGHLSNEQTAEALSKLLQGVGEQIYLTHLS 214 >gi|171779659|ref|ZP_02920615.1| hypothetical protein STRINF_01496 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281761|gb|EDT47195.1| hypothetical protein STRINF_01496 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 309 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + N + D G Sbjct: 1 MELQFLGTG-----------------AGQPSKSRNVSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QRQILETTIRPRKVKRIFITHLHGDHIFGLPGFLASRAFQANEEQTDLDIYGPVGIRSYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L L P ++ + N + M++ V+ A + I + Sbjct: 103 LNSLR---------LSGARLPYRIHFHEFDENSLGKVMETDKFVVYAEKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|161524356|ref|YP_001579368.1| beta-lactamase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189350890|ref|YP_001946518.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|160341785|gb|ABX14871.1| beta-lactamase domain protein [Burkholderia multivorans ATCC 17616] gi|189334912|dbj|BAG43982.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] Length = 258 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 32/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + + T V++D G + + L V +DA+L TH H+DH+ Sbjct: 14 ALVVEATSGTTTTRVLLDCGFSAKEVERRLGRLNLCVDDLDAILVTHEHSDHVG-----S 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 L ++ + +Y + + ++ + +A Sbjct: 69 ALTLARRASLPLYMS------------------WGTARAAGADAADVDLRVLWGDETAAI 110 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + +P H L F F + TDV L D L+++ Sbjct: 111 GDLAVMPYTVPHDAREPLQFVFMDGCRRLGVLTDVGMATPHITAVLSGCDALVLE 165 >gi|227893473|ref|ZP_04011278.1| ribonuclease Z [Lactobacillus ultunensis DSM 16047] gi|227864698|gb|EEJ72119.1| ribonuclease Z [Lactobacillus ultunensis DSM 16047] Length = 312 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 56/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R S + + + E + D G Sbjct: 1 MELEFLGTGAGQ----------------PSKQRNVSCVALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP I P + H RI S GFR Sbjct: 102 TSLK---VSRTKVSYP-----IKFVELSKPGLI-CQDKSFRVYTDRLDH-RIPSFGFRI 150 >gi|187934145|ref|YP_001885258.1| ribonuclease Z [Clostridium botulinum B str. Eklund 17B] gi|254808623|sp|B2TN28|RNZ_CLOBB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|187722298|gb|ACD23519.1| ribonuclease Z [Clostridium botulinum B str. Eklund 17B] Length = 315 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 77/281 (27%), Gaps = 69/281 (24%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PID 107 + +++D G + + + S+D + TH H DH G+ GL R + Sbjct: 28 NGRKILIDCGEGTQVAMRKIGWGFKSVDLICITHSHGDHTIGLPGLISIMGNSGRTEKVT 87 Query: 108 VYAA---PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 V + + L Y L+ +I+ N++ +C + + + Sbjct: 88 VVGPKGIKEIVNGLNVINPYLPYELEIIELENNDLKFIIDKNNMSLCEDNNKCNLILSSL 147 Query: 165 LQQHG-RISSLGFRFGN------------------------------------------- 180 +H + S F Sbjct: 148 EVEHSAKCLSYSFYIKRRPRFSVEKASKNNVPKPLWSKLQNQEIINYDNKIYTPDLVLDN 207 Query: 181 ------VAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKI 227 ++Y TD E ++ D I + + + + H + ES Sbjct: 208 ARKGIKISYVTDTRPIS-AIPEFIKYSDLFICEGTYGSDEDIDKAIKNKHMTFRESATLA 266 Query: 228 ELINPKNAILTHMHVDLDYDMV----LKSTPSRVVPAFDGM 264 K ILTH L K A+DG+ Sbjct: 267 LNGECKELILTHFSPALSEPESFVDNAKQVFHNSSVAYDGL 307 >gi|153813336|ref|ZP_01966004.1| hypothetical protein RUMOBE_03753 [Ruminococcus obeum ATCC 29174] gi|149830626|gb|EDM85717.1| hypothetical protein RUMOBE_03753 [Ruminococcus obeum ATCC 29174] Length = 303 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 89/331 (26%), Gaps = 101/331 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P RR ++ + R + +++++D G Sbjct: 2 LDLCLLGSGGMMPLP----------------RR-----WLTALMTRYNGSSLLIDCGEG- 39 Query: 65 YMQVL----REQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHL 118 QV ID + +TH H DHI G+ GL + P+ + ++ + Sbjct: 40 -TQVAVKERGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTLVGPKG-LERV 97 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R L IE ++ G I A H + G+ Sbjct: 98 VNALRVIAPELP-------FEIRFIEITKPQEVLELNGYRITA--FRVNH-NVICYGYTI 147 Query: 179 ----------------------------------GNVAYCTDVNAFPAE----------- 193 V Y D+ P Sbjct: 148 EILRQGKFSPERAKEQAIPLKYWNPLQKGQTIEVDGVVYTPDMVLGPDRKGIKVTYTTDT 207 Query: 194 --SLEKLQNL---DFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + L+N D I D ++ H + E+ N K LTH Sbjct: 208 RPTESILRNAAESDLFICEGMYGEEDKIEKAKGYKHMTFREAAALARDANVKELWLTHYS 267 Query: 242 ----VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 +Y +++ P DG Sbjct: 268 PSLIHPEEYMDMVRGIFPNAWPGKDGKSVEL 298 >gi|58039450|ref|YP_191414.1| pyrroloquinoline quinone biosynthesis protein PqqB [Gluconobacter oxydans 621H] gi|61252316|sp|Q9L3B3|PQQB_GLUOX RecName: Full=Coenzyme PQQ synthesis protein B; AltName: Full=Pyrroloquinoline quinone biosynthesis protein B gi|58001864|gb|AAW60758.1| Coenzyme PQQ synthesis protein B [Gluconobacter oxydans 621H] Length = 304 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 109/314 (34%), Gaps = 64/314 (20%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKN---RRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C + RT++SL +S +R I++ PD Sbjct: 5 IVLGAAAGGGFPQWNSAAPGCVAARTRQGAKARTQASLAVSADGKRW----FILNASPDL 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q++ L I V+ T D I G+ L+++ P + + + Sbjct: 61 RQQIIDTPALHHQGSLRGTPIQGVVLTCGEIDAITGL-----LTLREREPFTLMGSDSTL 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI---- 171 + L ++ F ALD P + + + + +G ++ A + + Sbjct: 116 QQLADNP--IFGALDPEIVPRVPLILDEATSLMNKDGIPSGLLLTAFAVPGKAPLYAEAA 173 Query: 172 -----SSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA--------LKNGLH 214 +LG + + + +E +E++ D + D ++ GL Sbjct: 174 GSRPDETLGLSITDGCKTMLFIPGCAQITSEIVERVAAADLVFFDGTLWRDDEMIRAGLS 233 Query: 215 SS------HFSLSESLKKIELI----NPKNAILTHMHVDLDYDMVLKSTPS-------RV 257 H S++++ +E P+ +L H++ ++ + +P Sbjct: 234 PKSGQRMGHVSVNDAGGPVECFTTCEKPRK-VLIHINNSNP--ILFEDSPERKDVERAGW 290 Query: 258 VPAFDGMQFSSPIP 271 A DGM F P Sbjct: 291 TVAEDGMTFRLDTP 304 >gi|159043006|ref|YP_001531800.1| pyrroloquinoline quinone biosynthesis protein PqqB [Dinoroseobacter shibae DFL 12] gi|157910766|gb|ABV92199.1| coenzyme PQQ biosynthesis protein B [Dinoroseobacter shibae DFL 12] Length = 297 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 100/314 (31%), Gaps = 78/314 (24%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G+P+ C+ P T+SSL ++ + PD Sbjct: 7 ILGAAAGGGLPQWNCGCDNCNLARSGTIPPQ--TQSSLAVTADGTSWAILN----ASPDI 60 Query: 65 YMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+ L + AVL T+ DH+ G+ L++ +P ++A + Sbjct: 61 RGQLADTPALHPTGLRDLPLRAVLVTNGDIDHVAGL-----LTLREMQPFRLFATAGIHE 115 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS---- 172 L E+ F A++ V P D P + G + P+ G++ Sbjct: 116 VLAENP--IFNAVN-----ATVVPRETIALDAPFELV-PGLIATLFPVP---GKVPLYLE 164 Query: 173 ------------SLGFRFGNV----AYCTDVNAFPAESLEKLQNLDFLIIDA-------- 208 ++G R + Y + +L D L D Sbjct: 165 GETVETDLIGDQTVGVRLQALDSTAYYIPGCALLTDDLRARLDGADTLFFDGTLWADDEM 224 Query: 209 LKNGLHSS------HFSL---SESLKKIELINPKNAILTHMHVDLD------YDMVLKST 253 ++ GL H S+ S+ E ++ + I HM+ + Sbjct: 225 VRAGLGKKTGKRMGHMSMSGPDGSIAAFEGLSIRQKIYVHMNNTNPVLRPSSAEKAQAEA 284 Query: 254 PSRVVPAFDGMQFS 267 + + DGM+ S Sbjct: 285 -AGWIIGQDGMEVS 297 >gi|326799935|ref|YP_004317754.1| ribonuclease Z [Sphingobacterium sp. 21] gi|326550699|gb|ADZ79084.1| Ribonuclease Z [Sphingobacterium sp. 21] Length = 303 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 33/179 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + TILG ++ P A + ++D G Sbjct: 2 RFEVTILGSNSAT--PLFGRHHTA-------------------QILNCNEIVSLIDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 +Q+ R + I + +H H DH G+ GL R + V+ + + Sbjct: 41 TQLQLQRYGIKANRIKYIFISHLHGDHYLGLVGLISSMHLNGRKEDLHVFGPEGLKEIID 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y +L + +P E + E I H RI+ GF F Sbjct: 101 LQLHYSETSLRYKLVVQTTSPHTAETI-------LSDANFEVITFPLSH-RINCTGFLF 151 >gi|327463249|gb|EGF09570.1| ribonuclease Z [Streptococcus sanguinis SK1] Length = 309 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N S + ++ E N + D G Sbjct: 1 MQLQFLGTGAGQ-------------PSKARN----VSSLVLKLLEE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + ++ ++++ + Sbjct: 43 QHQILETTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDLEIFGPKGIKNFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + P ++ + N + +++ H I +G+R Sbjct: 103 LSSLR-----VSGSRLPYRIDFHEFDENSLGKILET--DKFTVYADKLDH-TIFCVGYRV 154 >gi|291394385|ref|XP_002713584.1| PREDICTED: elaC homolog 1-like [Oryctolagus cuniculus] Length = 363 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DHI G+ L+ ++PI+++ Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHIFGLPGLLCTISLQSSCTVSRQPIEIFGPVGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ + + + +P +V+ +V + P Sbjct: 101 DFIWRTME---LSHTELVFPYVVHELVPTADQCP 131 >gi|330902434|gb|EGH33477.1| Beta-lactamase-like protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 105 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 10/74 (13%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++T ++VD G ++ R V + A+L TH HADH+HG+ L ++ + Sbjct: 20 NDTYILVDCGFSLRETERRLARLGVSASQLSAILVTHEHADHVHGVGLLS-----RRYNV 74 Query: 107 DVYAAPDCMKHLFE 120 VY + ++ + + Sbjct: 75 PVYLSSGTLRGMRK 88 >gi|268590654|ref|ZP_06124875.1| putative periplasmic protein [Providencia rettgeri DSM 1131] gi|291314047|gb|EFE54500.1| putative periplasmic protein [Providencia rettgeri DSM 1131] Length = 309 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 34/221 (15%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 ++ + D G + + + ++D++ TH H+DH+ L + I Sbjct: 54 NDKIYLFDAGYGASLRLVQSKAPLKNLDSIFITHLHSDHVADYPALLLNAWNSGLNHNIA 113 Query: 108 VYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 VY K ++++F P + ++ D+ ++ + Sbjct: 114 VYGPVGTESMTKGVWDTFSRDIDLRVKDEGKPDLR-QIVTAKDIQEGPVLKNDDVDISAL 172 Query: 165 LQQHGRI---SSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID---------- 207 H +L ++ + + D+ ++ +E ++ D+LI + Sbjct: 173 FVPHPPFNSDEALAYKIQSGGKTIVITGDMID-NSQIIEFAKDADYLISEVVLVSGVENL 231 Query: 208 --------ALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 L + S H + + K + N K+ +LTH+ Sbjct: 232 ANRIGNGSTLAKAIISHHTTAEDVGKIAKQANVKHLVLTHL 272 >gi|23099311|ref|NP_692777.1| hypothetical protein OB1856 [Oceanobacillus iheyensis HTE831] gi|41017560|sp|Q8EQ58|RNZ_OCEIH RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|22777540|dbj|BAC13812.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 306 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 33/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + S ++ + N + D G Sbjct: 1 MELVFLGTGA--GLPS---------------KTRNVSA-VALNMTQEINEVWLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + I + TH H DHI+G+ G R + + +P+ +Y + + Sbjct: 43 QHQILHTNLKPRKITKIFITHLHGDHIYGLPGFLSSRSFQSGENQPLCIYGPIGIKEFVE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + R + + TYP + I + N + QHG I S G+R Sbjct: 103 STLR---LSQTNLTYPITIKEITEDGN------LFETNEMMVETKKLQHG-IDSYGYRIK 152 >gi|288802531|ref|ZP_06407970.1| ribonuclease Z [Prevotella melaninogenica D18] gi|288335059|gb|EFC73495.1| ribonuclease Z [Prevotella melaninogenica D18] Length = 304 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N SS + ++D G +Q+ Sbjct: 8 ILGCGSAL-------------PTLQHNA---SSQVVEL-----REKLFMIDCGEGTQIQL 46 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH G+ G+ F R P+ +YA L ++ + Sbjct: 47 RRSRIHFSKIIAVFISHLHGDHCFGLPGMISTFGMTGRTAPLHIYAPAAFEPILDQTLNF 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ ++ + + +E IP+ RI G+ F Sbjct: 107 FCQGLEFEVV-----FHAVDTKQNKVVYEDRSLTVETIPLQH---RIDCCGYLF 152 >gi|41017796|sp|Q9GL73|RNZ2_GORGO RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|10946489|gb|AAG24916.1|AF308694_1 ELAC2 [Gorilla gorilla] Length = 826 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 478 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 517 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + +Q +P+ Sbjct: 518 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQREQALASLGKPLHPL 576 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 577 LVVAPSQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 636 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 637 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 691 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 692 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFNEKVGVAFDH 749 Query: 264 MQF 266 M+ Sbjct: 750 MKV 752 >gi|223043089|ref|ZP_03613136.1| ribonuclease Z [Staphylococcus capitis SK14] gi|222443300|gb|EEE49398.1| ribonuclease Z [Staphylococcus capitis SK14] Length = 306 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 96/300 (32%), Gaps = 74/300 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSVWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA-------- 111 Q+L + +D + +H H DHI G+ GL R + + +P+ + Sbjct: 43 QHQILHHSIKLGKVDHIFISHMHGDHIFGLPGLLTSRSFQGGENKPLTLIGPKGIQNYIE 102 Query: 112 ------------PDCMKHLFESFRYCFK----ALDDRTYPPIVNPIVIENNDVPICMK-S 154 P + + F Y + + + IE P + Sbjct: 103 TSLKLSESHLNYPITYIEINQQFTYHHEGFTVQAEVLNHGITSYGYRIEAPTTPGTINVE 162 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTD----------VNAFPAESLE------KL 198 A I P + F + Y +D + A ++ Sbjct: 163 ALKAIGLEPGPKYQEVKIQDTFEHNGLMYQSDDFKGEAKPGPIIAIFGDTKPCDNEYVLA 222 Query: 199 QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL 250 +N D ++ +A L N H SH + + + I+ N +++TH+ + + V Sbjct: 223 KNADVMVHEATYIEGEKTLANNYHHSH--IDDVFQLIKNANVGKSLITHISNRYNLEDVE 280 >gi|10946495|gb|AAG24919.1|AF308697_1 ELAC1 [Mus musculus] Length = 362 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 83/333 (24%), Gaps = 119/333 (35%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + ++PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCPISLQSGSVVARQPIEIYGPVGLR 100 Query: 116 KHLFES---------FRYCFKAL-DDRTYPPIVNPIVIENNDVPICMKSAGG-------- 157 ++ + F Y L P+ + D G Sbjct: 101 DFIWRTMELSHTELVFPYVVHELVPTADQCPVEELREFAHMDETDSSPKGQGRTILLDAE 160 Query: 158 ----------VIEAIPILQQHGRISSLGF------RFGNV--------------AY---- 183 H RI S GF R G + AY Sbjct: 161 ENSYCLVDDEQFVVKAFRLFH-RIPSFGFSVVEKKRAGKLNAQKLRDLGVPPGPAYGKLK 219 Query: 184 ------------------------------CTDVNA-FPAESLEKLQNLDFLIIDA---- 208 D + ++ D LI +A Sbjct: 220 NGISVVLDNGVTISPQDVLKKPMVGRKVCILGDCSGVVGDGGVKLCFEADLLIHEAGLDD 279 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + H + + +L K +LTH Sbjct: 280 SQIDKARDHGHSTPQMAAAFAKLSRAKRLVLTH 312 >gi|319938917|ref|ZP_08013281.1| ribonuclease Z [Streptococcus anginosus 1_2_62CV] gi|319811967|gb|EFW08233.1| ribonuclease Z [Streptococcus anginosus 1_2_62CV] Length = 309 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 82/295 (27%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E + D G Sbjct: 1 MQLQFLGTGAGQ----------------PSKARNVSSLVLKLLDEINEI--WMFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGID---GLRGYFLK-QKRPIDVYAA----PDC 114 ++L + I + TH H DHI G+ R + ++ I++Y Sbjct: 43 QNRILETTIRPRKIRKIFITHLHGDHIFGLPGFLSTRSFQANEEQTDIEIYGPVGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP------------------IVIENNDVPIC 151 M L Y F D++ I+ I D+ Sbjct: 103 MTSLRVSGSRLPYRIHFHEFDEKHLGKILETDKFTVYAEKLDHSIFCVGYRIMQKDLEGT 162 Query: 152 MKSAGGVIEAIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 + + + +P G++ G + Y + D Sbjct: 163 LDAEKLKVAGVPFGPLFGKVKNGEDVVLEDGTKIIAADYISAPRPGKIITILGDTRK-TH 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAEVAREAGVKRLLLNHIS 276 >gi|290893510|ref|ZP_06556494.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290557011|gb|EFD90541.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 243 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 41/229 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNYIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAIEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 G + + H + R Y D +A+ + + D L+ D Sbjct: 119 LEIGPFKVTFLKTIH-PVPCYAMRIEAAGKVFVYTAD-SAYQDSFIPFAECADLLVTDT- 175 Query: 210 KNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 N H H + +E K + N K+ +L+H+ D +++ + Sbjct: 176 -NFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLEVLKQE 223 >gi|313675628|ref|YP_004053624.1| RNAse z [Marivirga tractuosa DSM 4126] gi|312942326|gb|ADR21516.1| RNAse Z [Marivirga tractuosa DSM 4126] Length = 304 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 13/153 (8%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHA 86 + P + R +S + R + +++D G +Q+ R + + + +H H Sbjct: 11 NSAAPAHGRHHTSQVL-----RIQDMQIMIDCGEATQLQMKRYGLRKNRLSHIFISHLHG 65 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DH G+ GL R +Y L E K + R PI + ++ + Sbjct: 66 DHFLGLMGLLSTMHLNGRKTALYLHGPV--GLSEIISLHLKYANTRLSYPI-HFQELKGD 122 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + + IP+ RI GF Sbjct: 123 QSELILDHPKITVHTIPLQH---RIPCTGFLIK 152 >gi|225180990|ref|ZP_03734437.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] gi|225168187|gb|EEG76991.1| beta-lactamase domain protein [Dethiobacter alkaliphilus AHT 1] Length = 243 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 87/251 (34%), Gaps = 48/251 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC PR S + + + V++D G Sbjct: 1 MQLTVLGCFGPY--PRAGQSC---------------SGYLVQEGDS----AVLLDCGNGV 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPID---VYAAPDCMKH 117 + LR + ++DAV+ +H H+DH+ + +R + + P VYA D Sbjct: 40 LSR-LRYYIEPWNLDAVVLSHLHSDHVSDMMIIRYAIMVKRYQEPGPALKVYAPADPQSE 98 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 ++ Y D P+ + ++ I + + I Q G Sbjct: 99 -YDRLAY----KDFVATYPVTEDTCLRLGNMEITFSKGAHPVLSHLITIQSGE------- 146 Query: 178 FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKN---GLHSSHFSLSESLKKIELINP 232 + Y D FP S ++++ D + +A L+ H +H + ++ Sbjct: 147 -KKLVYSGDTEYFPEMS-QRIKGADLFLCEANYLREDIQKGHVNHLAAYQAANAALEGEV 204 Query: 233 KNAILTHMHVD 243 K +LTH H D Sbjct: 205 KRLVLTHHHPD 215 >gi|219849323|ref|YP_002463756.1| beta-lactamase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543582|gb|ACL25320.1| beta-lactamase domain protein [Chloroflexus aggregans DSM 9485] Length = 557 Score = 55.1 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 59/186 (31%), Gaps = 34/186 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ I +L TH H DHI + L P VY + L Sbjct: 57 LREKTDHIKGILITHGHEDHIGAVPHLIA---DLGFP-PVYGTKLTLGLLGNR------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V + I + G+ H ++GF G + Y Sbjct: 106 LKEHRLHDKVKTVQITERE-----PFQVGIFTVEAFHIAHSIPDAVGFAITTPAGLLIYL 160 Query: 185 TD-------VNAFP--AESLEKLQN--LDFLIIDALKNGL---HSSHFSLSESLKKIELI 230 TD V+ P E + +L N LI D ++ S ++ E+ I Sbjct: 161 TDWKLDHTPVDGRPTDLEKIAELGNRKPLVLITDCVRVESKGYTPSEATVGEAFDNIFAT 220 Query: 231 NPKNAI 236 P I Sbjct: 221 APGRII 226 >gi|189485347|ref|YP_001956288.1| metallo-beta-lactamase superfamily 1 protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287306|dbj|BAG13827.1| metallo-beta-lactamase superfamily 1 protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 274 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 52/172 (30%), Gaps = 36/172 (20%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T ++D G + L ++ A L TH H DHI G K I Sbjct: 22 EKATALIDCGCSAKYIIENLGALGIVPQNLTAALITHAHRDHI----STSGLGFLHKNNI 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D +F F+ + + E +P+ I Sbjct: 78 PVYLHED-------AFEDAFRKYGQK---------IEECASIPLYENFKIKDIFVESFEV 121 Query: 167 QH---GRISSLGFRFG--------NVAYCTDVNAFPAESLEKLQNLDFLIID 207 H + GF F + Y TD + + L + + L+++ Sbjct: 122 YHKDENVSRTFGFTFSSEINARKYKIGYVTDTGRICRKIIRNLIDSNILVLE 173 >gi|312601062|gb|ADQ90317.1| Putative serine protease, subtilase family active site [Mycoplasma hyopneumoniae 168] Length = 818 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 27 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 82 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 83 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 134 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 135 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 192 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 229 >gi|255658234|ref|ZP_05403643.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] gi|260849544|gb|EEX69551.1| metallo-beta-lactamase family protein [Mitsuokella multacida DSM 20544] Length = 330 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 S+ I + T VD F ++ + V ID V+ THPHADHI G+D Sbjct: 54 SILIQTAEQTVLIDTSDVDERDKFKRELDKAGVKKIDKVILTHPHADHIGGMD 106 >gi|223043180|ref|ZP_03613227.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] gi|222443391|gb|EEE49489.1| metallo-beta-lactamase family protein [Staphylococcus capitis SK14] Length = 207 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D D ++ L + + A+L TH H DHI +D + K + Sbjct: 19 ENEESVILIDPSSESDKIIKKLNQINKPLKAILLTHAHYDHIGALDDIIS-----KYDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY + L + + + P VI + P ++ IE Sbjct: 74 VYMHQEEFDFLQD-----PEKNGASKFKQYGMPQVI-SYAKPSKLEEGSKEIEGFKFDVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HSPGHSPGSLTYVFDEFAVVGDT 150 >gi|144575278|gb|AAZ53469.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448] Length = 821 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 27 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 82 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 83 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 134 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 135 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 192 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 229 >gi|144227463|gb|AAZ44183.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J] Length = 816 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 27 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 82 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 83 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 134 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 135 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 192 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 229 >gi|72080434|ref|YP_287492.1| hypothetical protein MHP7448_0092 [Mycoplasma hyopneumoniae 7448] Length = 817 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 23 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 78 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 79 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 130 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 131 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 187 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 188 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 225 >gi|71893448|ref|YP_278894.1| hypothetical protein MHJ_0089 [Mycoplasma hyopneumoniae J] Length = 812 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 23 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 78 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 79 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 130 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 131 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 187 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 188 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 225 >gi|54020126|ref|YP_115800.1| serine protease [Mycoplasma hyopneumoniae 232] gi|53987299|gb|AAV27500.1| putative serine protease, subtilase family active site [Mycoplasma hyopneumoniae 232] Length = 813 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 44/218 (20%) Query: 50 RGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 VI+D G F Q L+E+ I + TH H DHI GI Sbjct: 27 EDDYDIVIIDAGIKFANLFHTGIRGMVPNYQYLQEKQAKIRGLFVTHGHEDHIGGI---- 82 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL Q+ I ++A +++L F +D+ P + I I ND Sbjct: 83 -IFLVQEVDIKKIFAPKIAIQYLKAKF-------EDQKIRPKIEFIEINKNDTHRFESFT 134 Query: 156 GGVIEA---------IPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 A I I +HG I G FRF Y N E L+++ N + Sbjct: 135 VDFWTAQHSIPDAFGIRITSRHGSIMCTGDFRFD---YTPIGNYTDFERLKEIGNQKLTV 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A++ S + ++ + I+T Sbjct: 192 LFSDSTNAMRPNHSPSERDILGDIEMHMRSATRKIIIT 229 >gi|156037628|ref|XP_001586541.1| hypothetical protein SS1G_12528 [Sclerotinia sclerotiorum 1980] gi|154697936|gb|EDN97674.1| hypothetical protein SS1G_12528 [Sclerotinia sclerotiorum 1980 UF-70] Length = 832 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 91/267 (34%), Gaps = 58/267 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R S + R+ E G + D G + Sbjct: 543 EVITLGTGSAL----------------PSKYR-NVSATLLRIPEYG---NYLFDAGENTL 582 Query: 66 MQVLREQVLSIDAVL-------YTHPHADHIHGIDGL-RGY---------FLKQKRPIDV 108 Q+ R + VL +H HADH G + + + K I Sbjct: 583 GQMKRVFGKDLPGVLSNLKAIWISHLHADHHLGTASVIKAWHDETSKNEATRNNKLAI-- 640 Query: 109 YAAPDCMKHLFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 A+ M H + Y F+ L+ P VN + E I+A + Sbjct: 641 -ASDHGMIHWLTEYSEVEHYGFERLELIEMTPAVNNLYEEFTAAQ-TEAFGLSSIQACQV 698 Query: 165 LQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH------ 214 HG + ++ F F N VAY D P++ ++ Q LI +A + Sbjct: 699 SHCHGAL-AVAFNFPNGFKVAYSGDCR--PSQDFVRIGQGATLLIHEATFDDELQGDAIA 755 Query: 215 SSHFSLSESLKKIELINPKNAILTHMH 241 H + SE++ + + + +LTH Sbjct: 756 KKHSTTSEAMNIGKGMGARRILLTHFS 782 >gi|224537070|ref|ZP_03677609.1| hypothetical protein BACCELL_01947 [Bacteroides cellulosilyticus DSM 14838] gi|224521297|gb|EEF90402.1| hypothetical protein BACCELL_01947 [Bacteroides cellulosilyticus DSM 14838] Length = 272 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 84/274 (30%), Gaps = 76/274 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKD +LG G + GV R + R + ++VD Sbjct: 1 MKDT-QIIMLGTGNA-GVTRCYNTC---------------------FAIRTAENVLLVDA 37 Query: 61 GPD--FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 G +Q+ + + I + TH H DHI G + ++ + Sbjct: 38 GGGNGILVQLEKAGIAIERIHDMFVTHAHTDHILG----AVWVIRM-----------VAQ 82 Query: 117 HLFE-SFRYCFKALDDRTYPPIVNPIV---------------IENNDVPICMKSAGGVIE 160 + + F+ +++ I IE +V + G ++ Sbjct: 83 QMQSGRYAGVFRLYGHDKVLQVLDWICRMTLPKKIVQYLGNGIELCEVKDGERFKAGELK 142 Query: 161 AIPILQQHGRISSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------ 209 + GFR ++ D + ++ ++ D+L+ +A Sbjct: 143 LQSFDIGSTKEKQYGFRTTLPNGQSLVCLGD-EPYNEKNRPYVEGADWLLCEAFCLYKDR 201 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 H H + ++ K E + KN +L H Sbjct: 202 DIFKPYEKH--HSTALDAGKLAEELKVKNLLLYH 233 >gi|38234044|ref|NP_939811.1| hypothetical protein DIP1463 [Corynebacterium diphtheriae NCTC 13129] gi|38200306|emb|CAE49991.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 684 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 43/191 (22%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + ++ +DA++ TH H DHI Sbjct: 142 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IENKLDKVDALVITHGHEDHIGA 194 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + + + A+ M + K + R P ++ +V Sbjct: 195 I----PWLLKLRPDMPILASKFTMALIAA------KCREHRQRPKLI--------EVNEK 236 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC----TDVN-----------AFPAESLE 196 G H LG A DV PA S Sbjct: 237 SDINRGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPALSRF 296 Query: 197 KLQNLDFLIID 207 + +D L+ + Sbjct: 297 GDEGVDLLLCE 307 >gi|325265234|ref|ZP_08131960.1| ribonuclease Z [Clostridium sp. D5] gi|324029638|gb|EGB90927.1| ribonuclease Z [Clostridium sp. D5] Length = 305 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 85/270 (31%), Gaps = 54/270 (20%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++++D G + ++E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTALMTRFNGSSLLIDCGEGTQI-AIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ P+ + + L F F ++ +N ++ V Sbjct: 78 GNADRREPLTLIGPKGLERVVNALRVIAPELPFPIRFLEIEGAQQTFEMNGYRLKAFRVN 137 Query: 150 ICMKSAGGVIEA---------------IPIL-----------QQHGRISSLGFRFG---- 179 + G +E IP+ +Q GR+ + G Sbjct: 138 HNVLCYGYTLEIDRAGKFDIERAKAQEIPMQCWNLLQKGQTVEQDGRVLTPDMVLGAPRK 197 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELI 230 V Y TD E ++ D I + + H + E+ Sbjct: 198 GIKVTYTTDTRP-TDSIRENAKDSDLFICEGMYGEKDKAAKAVEYKHMTFYEAAALAREA 256 Query: 231 NPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 K LTH L ++ PA Sbjct: 257 QVKELWLTHYSPSLTRPEEFMDDVKKIFPA 286 >gi|303229337|ref|ZP_07316127.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515873|gb|EFL57825.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 269 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 51/217 (23%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMSQVEGIFISHEHTDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + ++E + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKHQLVELTKGSLEL----GNLTVEPFSV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH-- 214 H +G TD + L +L L+++A L+ G + Sbjct: 124 SHDAADPIGINVYSGKDKATVVTDTGVITDDILHRLDGSTLLVLEANYDPQMLRFGPYQP 183 Query: 215 ---------SSHFS---LSESLKKIELINPKNAILTH 239 H S +++L ++ + IL H Sbjct: 184 FLKQRVASDEGHLSNEMAAQALLMMKRPDFMQVILAH 220 >gi|153856043|ref|ZP_01996946.1| hypothetical protein DORLON_02974 [Dorea longicatena DSM 13814] gi|149751733|gb|EDM61664.1| hypothetical protein DORLON_02974 [Dorea longicatena DSM 13814] Length = 302 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 94/291 (32%), Gaps = 81/291 (27%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P R +SL + + +++++D G + Sbjct: 6 LLGTGGMMPLP----------------YRWLTSLMVRY-----NGSSLLIDCGEGTQI-A 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGI----------DGLRGYFL-------KQKRPIDV 108 ++E+ ID + +TH H DHI G+ D + L + + V Sbjct: 44 IKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTKPLTLIGPKGLERVVNALRV 103 Query: 109 ----------YAAPDCMKHLFESFRY------------CFKALDDRTYPPIVNPIVIENN 146 Y + FE Y C+ + + + + Sbjct: 104 IAPELPFQIKYMEITETEQTFELNGYRLKAFRVNHNVTCYGYTMEIDRAGKFDVERAKAS 163 Query: 147 DVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFG-NVAYCTDVNAFPAESLEK-LQN 200 ++P + G IE + LG R G + Y TD P ES+++ ++ Sbjct: 164 NIPQEYWGLLQKGETIETK--RHVYTPNMVLGPARKGIKLTYTTDTR--PTESIKQNAKH 219 Query: 201 LDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D I + + K H + E+ + + K LTH L Sbjct: 220 SDLFICEGMYGEKDKQKKAKEYKHMTFYEAAQLAKEAEVKEMWLTHYSPSL 270 >gi|108757572|ref|YP_631594.1| ribonuclease Z family protein [Myxococcus xanthus DK 1622] gi|108461452|gb|ABF86637.1| ribonuclease Z family protein [Myxococcus xanthus DK 1622] Length = 306 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 72/248 (29%), Gaps = 62/248 (25%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDC 114 V++D G D + +H H DH G+ L G + V+ + Sbjct: 55 VVLDVGLPIRS------FCGSDRIFLSHAHPDHASGLGSLLGIRRLIGKGAPQVFLPAEI 108 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 +++ S A+ R + + + + G + A + H + SL Sbjct: 109 EENVQASL-----AVMSRLHHTSMEVHTVPMLPGDVRPLGQGLFVRAF---RTHHPVPSL 160 Query: 175 GFRFGN-----------------------------------VAYCTDVNAFPAESLEKLQ 199 G++F +AY TD + ++ L Sbjct: 161 GYQFFRRVAKLRLEHQSLPPQEIARRRQAGEALFDEVERLELAYATDTLSRVLDTEPGLF 220 Query: 200 NLDFLIIDALKNGLHSS--------HFSLSESLKKIELINPKNAILTHMHVDLD----YD 247 + LI++ S H + E L + + + +L H L + Sbjct: 221 DSRVLILECTFVDARHSVQDAQAKAHLHVDELLARADQFRNEALVLMHFSQALPPESVHA 280 Query: 248 MVLKSTPS 255 + P Sbjct: 281 TLRARLPP 288 >gi|323345683|ref|ZP_08085906.1| ribonuclease Z [Prevotella oralis ATCC 33269] gi|323093797|gb|EFZ36375.1| ribonuclease Z [Prevotella oralis ATCC 33269] Length = 305 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 58/155 (37%), Gaps = 17/155 (10%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P R + SS + ++D G +Q+ R ++ I++V +H H Sbjct: 11 CGSALPTLRHSASSQVVEMRG-----KYFMIDCGEGTQVQLRRSRISFTKINSVFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G+ F R P VYA + + LF F D V + Sbjct: 66 GDHCLGLIGMISTFGMLGRTSPFHVYAPIE-FESLFYRQLELFCHGLDFD----VTFHGV 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + +E IP+ RI+ G+ F Sbjct: 121 DTTGNKVVFEDRSLTVETIPLDH---RIACCGYLF 152 >gi|302346419|ref|YP_003814717.1| ribonuclease Z [Prevotella melaninogenica ATCC 25845] gi|302151015|gb|ADK97276.1| ribonuclease Z [Prevotella melaninogenica ATCC 25845] Length = 312 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N SS + ++D G +Q+ Sbjct: 16 ILGCGSAL-------------PTLQHNA---SSQVVEL-----REKLFMIDCGEGTQIQL 54 Query: 69 LREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH G+ G+ F R P+ +YA L ++ + Sbjct: 55 RRSRIHFSKIIAVFISHLHGDHCFGLPGMISTFGMTGRTAPLHIYAPAAFEPILDQTLNF 114 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ ++ + + +E IP+ RI G+ F Sbjct: 115 FCQGLEFEVV-----FHAVDTKQNKVVYEDRSLTVETIPLQH---RIDCCGYLF 160 >gi|221234171|ref|YP_002516607.1| ribonuclease Z [Caulobacter crescentus NA1000] gi|220963343|gb|ACL94699.1| metal-dependent hydrolase [Caulobacter crescentus NA1000] Length = 363 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 28/184 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR----P 105 +VD+G +L + + AV TH H+DHI + L P Sbjct: 80 GKDLFVVDSGSGSTRNLLLMNMPPPRVSAVFITHYHSDHIADLGEL-MLQRWAGGASKTP 138 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDD----RTYPPIVNPIVIENNDVPI----------C 151 VY ++ + + F + + P + P Sbjct: 139 TPVYGPQG-LEQVVQGFEQAYTLDRGYRIAHHGEAVAPPSGFGGDPRPFVADPAAPDVLV 197 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 ++ G + A P+ H ++G+RF +V D ++ + D L+ + Sbjct: 198 LEKPGLKVWAFPV-AHHPVEGAVGYRFEYKGRSVVISGDT-GPSERLVKASKGADLLLHE 255 Query: 208 ALKN 211 L Sbjct: 256 GLAP 259 >gi|126652162|ref|ZP_01724344.1| ribonuclease Z [Bacillus sp. B14905] gi|126591070|gb|EAZ85181.1| ribonuclease Z [Bacillus sp. B14905] Length = 313 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 35/179 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG GA G+P + +S + ++ + S + D G Sbjct: 5 QLHFLGTGA--GMPS---------------KERNTSALMVKLLDEISEM-WLFDCGEATQ 46 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + + + TH H DHI G+ G R + P+ ++ + + + Sbjct: 47 HQILHTSLKPRKVSKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIFGPAGLQQWIEQ 105 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +F + TYP +E + + +H + G+R Sbjct: 106 TFS---LSKTHLTYP----LHFVEVQEGIVYEDDC---FTVYAKELRH-VVPCYGYRIE 153 >gi|15895880|ref|NP_349229.1| ComE-like protein [Clostridium acetobutylicum ATCC 824] gi|15025647|gb|AAK80569.1|AE007759_7 ComE-like protein, Metallo beta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|325510032|gb|ADZ21668.1| ComE-like protein, Metallo beta-lactamase superfamily hydrolase [Clostridium acetobutylicum EA 2018] Length = 307 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 33/208 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + +++DTG + L ++ + I+ ++ THPH DHI G D + Sbjct: 58 SILVQ-----DGDKNMLIDTGTNESQNYLISYLKKQNIKEINYMVLTHPHEDHIGGADKV 112 Query: 96 RGYFLKQKRPIDVYAAP-DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND----VPI 150 F+ K +Y F Y K + P + D P+ Sbjct: 113 IKNFIVDK----IYMNSVSTNTKTFRDLIYAMKEKGLKADEPDSENFKLNKADCNVYGPV 168 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL-EKLQNLDFLIIDAL 209 +I + +G+ + D + E++ EK +L D L Sbjct: 169 NPTEGNLNTYSIVVKVTYGQ--------NKFLFTGDTQSSNEEAMIEKGYDLKC---DVL 217 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAIL 237 K H S S ++ + ++PK A++ Sbjct: 218 KIAHHGSRTSSTD--DFLNYVSPKYAVI 243 >gi|310829298|ref|YP_003961655.1| beta-lactamase domain protein [Eubacterium limosum KIST612] gi|308741032|gb|ADO38692.1| beta-lactamase domain protein [Eubacterium limosum KIST612] Length = 581 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 55/180 (30%), Gaps = 43/180 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F + E + + TH H DHI GI K Sbjct: 59 IIVDCGLKFPDDEMYGIDIVLPDFSYIVENADKLKGLFITHGHEDHIGGI---VYLVKKL 115 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +YA M + K L + V+ V++ D + G E Sbjct: 116 GITVPIYATKFTMGLID-------KKLVEHRLVTSVDRQVVKAGD-----RVQKGSFEVE 163 Query: 163 PILQQHGRISSLGFRFGNVA------------YCT-DVNAFPAESLEKL--QNLDFLIID 207 I H S+ F A Y D + + KL Q +D L+ D Sbjct: 164 FIRVNHSVADSVAFYIKTPAASVLHTGDFKIDYQPIDGEIMDLQRIAKLGSQGIDLLMAD 223 >gi|302527774|ref|ZP_07280116.1| coenzyme PQQ biosynthesis protein B [Streptomyces sp. AA4] gi|302436669|gb|EFL08485.1| coenzyme PQQ biosynthesis protein B [Streptomyces sp. AA4] Length = 289 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 20/128 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C +P RT+ S+ S +++ PD Sbjct: 1 MKVILLGTAAGGGFPQWNCACARCASGSPP--RTQDSVAFSADDRTWH----LLNASPDI 54 Query: 65 YMQ-----VLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q LR + VL T DH G+ L++ + V+A P + Sbjct: 55 RAQILATPALRAGPGPRETPLRTVLLTDAELDHTLGL-----LMLREAPTLTVHAPPAAL 109 Query: 116 KHLFESFR 123 L + F Sbjct: 110 HALTDHFP 117 >gi|242373804|ref|ZP_04819378.1| ribonuclease Z [Staphylococcus epidermidis M23864:W1] gi|242348541|gb|EES40143.1| ribonuclease Z [Staphylococcus epidermidis M23864:W1] Length = 306 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 63/180 (35%), Gaps = 34/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T G S G+P K R T+S I+ E SN+ + D G Sbjct: 1 MEVTFFGT--SAGLPT-------------KERNTQS---IALNLEPYSNSVWLFDVGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + +D + TH H DHI G+ GL R + + +P+ + ++ Sbjct: 43 QHQILHHSIKLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTLIGPKGIQNYIE 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 S + + YP I ++ L HG I+S G+R Sbjct: 103 TSLK---LSESHLNYP-------ITYIEINQQFTYHHEGFTVKAELLNHG-ITSYGYRIE 151 >gi|213964503|ref|ZP_03392703.1| ribonuclease J [Corynebacterium amycolatum SK46] gi|213952696|gb|EEB64078.1| ribonuclease J [Corynebacterium amycolatum SK46] Length = 693 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 39/155 (25%) Query: 53 NTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 N +IVD G PDF + ++ ++A++ TH H DHI I Sbjct: 151 NRLIIVDCGVLFPSSDEPGVDLILPDF--SYMEDKWDRVEALVVTHGHEDHIGAI----P 204 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + LKQ+ I + A+ + + K + R P VIE ND + G Sbjct: 205 WLLKQRADIPIIASRFTLALIQA------KTQEHRQ-----RPKVIEVNDTSHIQR---G 250 Query: 158 VIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + H LG G V + DV Sbjct: 251 PFDLRFFNVNHSIPECLGIVIKTGAGMVVHTGDVK 285 >gi|317152909|ref|YP_004120957.1| beta-lactamase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943160|gb|ADU62211.1| beta-lactamase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 293 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 72/248 (29%), Gaps = 48/248 (19%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +I+D G +++ + + + +H H DHIHG+ F + Sbjct: 33 SDAGELIILDAGTGIRELGIELMAARPVKCH-IFISHTHWDHIHGLPFFLPLFTP-GNAV 90 Query: 107 DVYAAPDCMK------HLFESFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +Y PD + L + Y F I + + V + + ++ Sbjct: 91 TLYGPPDPLAMTGIEAVLSKQMEYPHFPVRVAELRADIAYRTLADRQAVDLGFATVSTLL 150 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTD---------------------VNAFPAESLEKL 198 P + ++ G + + D V+ + L Sbjct: 151 MNHPAMDFGCKVRCDG---KTLFFTGDHEPYYNIYAPGDADFEEYGRIVDERNKALTDFL 207 Query: 199 QNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + +D L+ DA + H + +L LTH ++ Sbjct: 208 RGVDILVADAQYAEEEYRTRRGWGHSTFERTLSLAREAGIARVYLTH------HETTRTD 261 Query: 253 TPSRVVPA 260 V+ A Sbjct: 262 DEMDVILA 269 >gi|312621851|ref|YP_004023464.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] gi|312202318|gb|ADQ45645.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kronotskyensis 2002] Length = 821 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 67/219 (30%) Query: 45 SRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGID----G 94 S V + +++D+G Q+LRE + +D L +H H DHI + Sbjct: 15 SCVLIKAGGKNILIDSGIRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLPLIARE 73 Query: 95 LRGYFLKQKRP----------------------IDVYAAPDCMKHLFES----FRYCFKA 128 F +P I +YA + L + F Y F+ Sbjct: 74 YPNIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFNYTFEP 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ ++ + + I + G++ Y D + Sbjct: 134 IEGIKVTFFPAGHILGASMIFIQTQE------------------------GSILYTGDFS 169 Query: 189 -----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S+ K++ D +I ++ ++ + E Sbjct: 170 ADRQLTVDKASVPKIR-PDVVICESTYGDRLHTNRNFEE 207 >gi|290890597|ref|ZP_06553668.1| hypothetical protein AWRIB429_1058 [Oenococcus oeni AWRIB429] gi|290479725|gb|EFD88378.1| hypothetical protein AWRIB429_1058 [Oenococcus oeni AWRIB429] Length = 325 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 55/185 (29%), Gaps = 40/185 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R +S+ + + ER N + D G Sbjct: 1 MELEFLGTGAGQ----------------PSKQRNVTSIALRLLDER--NEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYF----LKQKRPID--VYAAPD 113 Q+L+ + + TH H DHI G+ G R + + +P D +Y Sbjct: 43 QHQLLKSNTRSRKVTKIFITHMHGDHIFGLPGFLTSRNFQGSELIDGGKPTDVTIYGPAG 102 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 +++ F A Y I V + HG I Sbjct: 103 LQQYV---FSVLRAAQVHLQYR-------INFIQVRPGIIFEDQQFAVSAFPMNHG-IED 151 Query: 174 LGFRF 178 +R Sbjct: 152 YAYRV 156 >gi|238855837|ref|ZP_04646126.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus jensenii 269-3] gi|260664973|ref|ZP_05865823.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii SJ-7A-US] gi|282933327|ref|ZP_06338710.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] gi|238831500|gb|EEQ23848.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus jensenii 269-3] gi|260561027|gb|EEX27001.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii SJ-7A-US] gi|281302512|gb|EFA94731.1| beta-lactamase superfamily hydrolase [Lactobacillus jensenii 208-1] Length = 265 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 53/237 (22%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G D QV + ID +H H+DH G+ G +++ Sbjct: 20 EKHKILMDAGLSGKKIKDLLAQV-GVDINDIDMAFLSHDHSDHSKGL----GVLMRRYPQ 74 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I+ +A K+L + + P+ IE V + +E Sbjct: 75 INAFANSGTWKYLIDE--------NKVGKLPVEQINTIEPGQVK-----SFDDLEIQAFA 121 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII----DA--LKNGLHS 215 H + F + + TD + + +++ D ++ D L+NG +S Sbjct: 122 TSHDAAQPQYYVFSSAGKRITFLTDTGYVSEKVRDVIKDSDAYMLEFNYDTELLRNGSYS 181 Query: 216 -----------SHFSLSESLKKIELI---NPKNAILTHMHVD-----LDYDMVLKST 253 H S ++ + E + K+ LTH L +D ++ + Sbjct: 182 WQLKKRIMSDYGHLSNEQASEVFEDVLTAKTKHIFLTHRSQHNNTLRLAHDTLVNNL 238 >gi|297702621|ref|XP_002828271.1| PREDICTED: zinc phosphodiesterase ELAC protein 1-like [Pongo abelii] Length = 363 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 89/337 (26%), Gaps = 122/337 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLR 100 Query: 116 KHLFES---------FRYC------------------FKALDDRTYPPIVNP--IVIENN 146 ++ + F Y F ++ PP ++ ++ Sbjct: 101 DFIWRAMELSHTELVFHYVVHELVPTADQCPAEELKEFVHVNRADSPPKEEQGRTILLDS 160 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGF------RFGNV--------------AY--- 183 + + H RI S GF R G + AY Sbjct: 161 EENSYLLFDDEQFVVKAFRLFH-RIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKL 219 Query: 184 -------------------------------CTDVNA-FPAESLEKLQNLDFLIIDAL-- 209 D + ++ D LI +A Sbjct: 220 KNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLD 279 Query: 210 -----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 K H H + + +L K +LTH Sbjct: 280 DAQMDKAKEHG-HSTPQMAATFAKLCRAKRLVLTHFS 315 >gi|317129507|ref|YP_004095789.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] gi|315474455|gb|ADU31058.1| RNA-metabolising metallo-beta-lactamase [Bacillus cellulosilyticus DSM 2522] Length = 557 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F M L+E + A++ TH H DHI GI + Sbjct: 29 EDDIIIIDCGNKFPDESLLGIDLIIPDMSYLQENKEKVRALIVTHGHEDHIGGI----PF 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLK K + V+A + + + E ++ + G Sbjct: 85 FLK-KLNVPVFATRFTLGLI------------ELKLREHKILRESELKEITSASELTFGK 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + H LG F GNV + D Sbjct: 132 VSVDFFKVTHSIPDCLGMVFRTPEGNVVHTGDFK 165 >gi|218462144|ref|ZP_03502235.1| beta-lactamase domain protein [Rhizobium etli Kim 5] Length = 343 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 73/217 (33%), Gaps = 47/217 (21%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 3 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 60 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + VYA+ L + + + P V Sbjct: 61 DHYGALADLWP-----GLNVPVYASGFTAGLLEAKRNFEKAKIGEVPVTPFKAGDTINVG 115 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P+ G + G ++ ++ TD Sbjct: 116 PFSIEGVAVNHSIPEPMSLMIRTPV----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 166 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 167 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 203 >gi|184200647|ref|YP_001854854.1| hypothetical protein KRH_10010 [Kocuria rhizophila DC2201] gi|183580877|dbj|BAG29348.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 279 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 35/220 (15%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADH---IHGID----- 93 +S G +++D G + R + +IDA++ +H H DH + G+ Sbjct: 23 LVSGQDAEGRTWRIVLDMGNGALGTLQRYIDLHAIDAIMLSHLHPDHCVDVGGLHVAVKW 82 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 RG+ I +Y +L + + + + V + Sbjct: 83 DPRGWN---AGTIPLYGPSATHTYLNQ----LHMLPPEHSMATEFDFHVWQPGR-----P 130 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF--------GNVAYCTDVNAFPAESLEKLQNLDFLI 205 G H R + Y D ++ E + ++ D + Sbjct: 131 VTVGPFTVAAFPVNHPCPEPFALRVEYHGPHGTEVLTYSGDTDSC-DELVAAARDADVFL 189 Query: 206 IDALKNGLHSSHF---SLS--ESLKKIELINPKNAILTHM 240 +A H L+ + + + + +LTH+ Sbjct: 190 CEAAYEEGREDHLRGIHLTGRRAGEAATAAHVRRLLLTHL 229 >gi|260166619|ref|NP_001159434.1| zinc phosphodiesterase ELAC protein 2 isoform 3 [Homo sapiens] gi|194391026|dbj|BAG60631.1| unnamed protein product [Homo sapiens] Length = 786 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 438 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 477 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 478 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 536 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 537 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 596 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 597 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 651 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 652 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 709 Query: 264 MQF 266 M+ Sbjct: 710 MKV 712 >gi|317130978|ref|YP_004097260.1| hypothetical protein Bcell_4302 [Bacillus cellulosilyticus DSM 2522] gi|315475926|gb|ADU32529.1| hypothetical protein Bcell_4302 [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 55.1 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 83/252 (32%), Gaps = 58/252 (23%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHA 86 R S+ S + N +++D G + + Q + S+D +L TH H+ Sbjct: 3 LRFSVLASGSTGNAIYVETGNQKLLIDAGLSGKKIENCFKQ-INISPESLDGILVTHEHS 61 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DHI G+ L ++ + +YA K + ++ I IE Sbjct: 62 DHIKGVG-----ILARRYDLPIYANDKTWKAME----------------GLLGNIPIEQR 100 Query: 147 -DVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNL 201 I G I+ H + F F +A TD + Sbjct: 101 FHFEIGETKLFGDIDVESFGVSHDAAEPMFFTFQHSGRKLALVTDTGYVSDRIKGTTKEA 160 Query: 202 DFLI------IDALKNGLHS-----------SH-FSLSESLKKIELI--NPKNAILTHMH 241 + I +D L+ G + H ++ +L ++I + N L H+ Sbjct: 161 NTFIFESNHDMDMLRMGKYPWSVKRRILGDEGHVSNVDAALALSDIIMDSSANVYLAHLS 220 Query: 242 VDLDYDMVLKST 253 +D + + + T Sbjct: 221 LDNNMKELARMT 232 >gi|331237059|ref|XP_003331187.1| hypothetical protein PGTG_13150 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310177|gb|EFP86768.1| hypothetical protein PGTG_13150 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 498 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + T LG S G P I +R SSL + + + D G Sbjct: 20 FEITFLGT--SAGKPTI--------------QRNPSSLALRMDGQIW-----MFDCGEAT 58 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGI 92 Q++R + ++ + TH H DH+ G+ Sbjct: 59 THQIMRTNLKPSNVTKIFITHLHGDHVLGL 88 >gi|296222673|ref|XP_002757289.1| PREDICTED: zinc phosphodiesterase ELAC protein 1 [Callithrix jacchus] Length = 363 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 29/127 (22%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSIVSKQPIEIYGPVGLR 100 Query: 116 KHLFESF 122 ++ + Sbjct: 101 DFIWRTM 107 >gi|306821537|ref|ZP_07455137.1| metallo-beta-lactamase YycJ [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550431|gb|EFM38422.1| metallo-beta-lactamase YycJ [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 262 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 29/164 (17%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D G + + ID A+ TH H+DHI G + +K I Sbjct: 21 DNCILIDAGLSGKATIDAINMHDIDTSKIRAIFITHEHSDHIKG-----AGIISRKFDIP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA + +IEN D K G +E I + Sbjct: 76 IYATELTWDAMSNKIGNIKDEHIK----------IIENAD-----KVCIGDLEISSIPVK 120 Query: 168 HGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 H + ++ + ++ TD+ + + ++ + ++++ Sbjct: 121 HDAADPVAYKVTDGKRILSIITDLGVVTKKVFDFVKKSNAIVLE 164 >gi|257457947|ref|ZP_05623106.1| ribonuclease Z [Treponema vincentii ATCC 35580] gi|257444660|gb|EEV19744.1| ribonuclease Z [Treponema vincentii ATCC 35580] Length = 308 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 91/294 (30%), Gaps = 94/294 (31%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG + +P R +S+ + R + + D G + + Sbjct: 7 ILGCGGMMPLP----------------YRHLTSVLLRREGDL-----FLFDAGEGTQVSL 45 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAP------DCMKHL 118 R + I+ + +H HADH+ G+ G+ + R +Y P + + + Sbjct: 46 RRLNLRWKKINTIFISHTHADHVTGLPGILMLSAQVDRDEPLYIIGPPKIKEYIETSRQV 105 Query: 119 FESF------------------------------------RYCFKALDDRTYPPIVNPIV 142 + + Y F ++ P +P Sbjct: 106 LDMYINYEIIIKEITEPGIVYKTDEFQVRAFWLEHTKPCLGYVF---EEFPRPGAFDPEA 162 Query: 143 IENNDVP-----------ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP 191 +VP I ++++ G + + H R ++ TD P Sbjct: 163 ARRLNVPCGPLWSKLQAGIAVEASDGTVVESSQVLGHPRSGR------KFSFVTDTKYLP 216 Query: 192 AESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ DFL+ +++ ++ H + +++ + K L H Sbjct: 217 -TIAPEVAGSDFLVCESMFEKGMEQDAAEKKHMTCTQAAQIARDAAVKKMALIH 269 >gi|82595738|ref|XP_725972.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481184|gb|EAA17537.1| similar to elaC homolog 1 [Plasmodium yoelii yoelii] Length = 787 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 30/128 (23%) Query: 2 KDYYHFTILGCGA-----SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV 56 K + LG G+ S G +S I + +++ N Sbjct: 283 KSDWKLIFLGTGSMYPSISRG----------------------TSSFIFQTTKKKYNEAY 320 Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 + D G ++ + + + I + TH H DH G+ + LK + I++Y Sbjct: 321 LFDCGESTFISLQKANIKISKIKNIFITHLHGDHCLGLISVLT-MLKNLKTINIYGPEGI 379 Query: 115 MKHLFESF 122 + L SF Sbjct: 380 YRFLKNSF 387 >gi|309356154|emb|CAP37843.2| hypothetical protein CBG_20910 [Caenorhabditis briggsae AF16] Length = 325 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 52 SNTTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++DTG VL I ++ TH H DH+ GID +R L K+ Sbjct: 75 GSDKILIDTGEPNISGYISALKSVLSSTNSQIAYIVITHWHGDHVGGIDNIREEILNHKK 134 Query: 105 PIDVYAAPDCMKHLFESFRYC 125 I +Y E F Y Sbjct: 135 -IPIYKMQRDKDEGVERFTYV 154 >gi|241995651|gb|ACS75022.1| PqqB [Methylophilus methylotrophus] Length = 295 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 70/236 (29%), Gaps = 40/236 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDT 60 H +LG GA G P+ + CD RRT+SS+ +S V+ + Sbjct: 1 MHIHVLGAGAGGGFPQWNCNCQNCDGLRKGTIKAKRRTQSSICVSSNGVDW----VLFNA 56 Query: 61 GPDFYMQVLRE-------QVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 PD Q+ + I A++ DH G+ LR +K+ ++Y Sbjct: 57 SPDVLQQIQEFAPLQPGRGIRDTGIQAIVLIDAQIDHTTGLFMLREGQVKR----EIYCT 112 Query: 112 PDCMKHLFESF-------RYCFKALDDRTYPP--IVNPIVIENNDVPICMKSAGGVIEAI 162 L YC + I E VP +A + A Sbjct: 113 KAVYGDLTSGNQILNILGHYCGINHHEIPIDTNDISQAHSFEIPGVPNLRFTAVALKSAA 172 Query: 163 PILQQHGRISSLGFRFGNVA----------YCTDVNAFPAESLEKLQNLDFLIIDA 208 P H G G + Y + + D +++D Sbjct: 173 PPYSPHRNDPHPGDTIGVLIEEISTGKKCWYSPGLAEIEPHLPPLMNQADCIMVDG 228 >gi|150019194|ref|YP_001311448.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905659|gb|ABR36492.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 236 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 40/224 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--YMQVLR--EQVLSIDAVLYTHPHADHIHGIDG 94 +S + R N+ +++D G +Q L + + ++ ++ TH H DH+ + Sbjct: 17 NTSAFLKR-----DNSLLLIDCGGTVFHRLQELNLLDGLENL-YIIITHTHPDHVGSLGE 70 Query: 95 LRGY-FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + Y + KR + ++ K L E F + + + + Sbjct: 71 VIFYSYYILKRRVTIFFPK---KQLIEGF--------LTSIGISAEMYKLNSFERIAVND 119 Query: 154 SAGGVIEAIPILQQH-GRISSLGFRF---GN-VAYCTDVNAFPAESLEKLQN-------L 201 + G + H I + GF G Y D N +LEKL+N Sbjct: 120 AQIGEFSIEFLPVSHVDTIPAYGFTIRLNGRVFYYSGDANDISKIALEKLKNGQIYRIYQ 179 Query: 202 DFLIIDALKNGLHSSHFSLSESLKKI-ELINPKNAILTHMHVDL 244 D +D +SH SL + I + + K H+ + Sbjct: 180 DTCGLD----YEGNSHLSLRRLCEIIPQELRNK-VYCMHLDKHI 218 >gi|184200957|ref|YP_001855164.1| putative ComEC/Rec2-related protein [Kocuria rhizophila DC2201] gi|183581187|dbj|BAG29658.1| putative ComEC/Rec2-related protein [Kocuria rhizophila DC2201] Length = 913 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFYM--QVLR-EQVLSIDAVLYTHPHADHIHGI 92 G ++ V+VD GPD Q LR V +DAV+ TH HADH+ G+ Sbjct: 650 GEHSAVLVDGGPDPRALTQCLRDADVTHLDAVIATHDHADHVAGL 694 >gi|238027988|ref|YP_002912219.1| hypothetical protein bglu_1g24370 [Burkholderia glumae BGR1] gi|237877182|gb|ACR29515.1| Hypothetical protein bglu_1g24370 [Burkholderia glumae BGR1] Length = 257 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 56/213 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG--- 61 FT LG G S G + + + + T V++D G Sbjct: 1 MRFTSLGSG-SEG-----------------------NALVVEAASGTTTTRVLLDCGFSA 36 Query: 62 PDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 + ++ R + +DA+L TH H+DHI L ++ + ++ + + + Sbjct: 37 KEIDRRLTRVGLASDELDAILITHEHSDHIG-----SALTLARRFGLPLFMSWGTARAV- 90 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + I+ + + + G + P H L F F Sbjct: 91 -----------------GADAAGIDLHVLWGDEATPIGDLAIHPYTVPHDAREPLQFVFT 133 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD L D L+++A Sbjct: 134 DGAARLGVLTDAGMSTPHLCAVLSGCDALVLEA 166 >gi|207743512|ref|YP_002259904.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum IPO1609] gi|206594910|emb|CAQ61837.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum IPO1609] Length = 261 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 53/179 (29%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S+ ++T +++D G V L S+ A+L TH H DH+ Sbjct: 16 ALLVESSDGATSTRILLDCGFGIRETVRRLERLGCAPESLSAILVTHEHGDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM---K 153 Y K I V+ + Y + + + C Sbjct: 71 AYAFAAKYNIPVWTSHGT-------------------YRATASLRGADRAAIRFCRADDV 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + +P H L F F + + TD L L +++ Sbjct: 112 FSIGDLRVLPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLHAFVLEC 170 >gi|282879445|ref|ZP_06288183.1| putative ribonuclease Z [Prevotella buccalis ATCC 35310] gi|281298443|gb|EFA90874.1| putative ribonuclease Z [Prevotella buccalis ATCC 35310] Length = 305 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 61/178 (34%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L PT N S +VD G Sbjct: 4 FRIHILGCGSAL-------------PTLKHNA--------SSQVVDIRGKLFMVDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ R +V + AV +H H DH G+ G+ F R + VYA + + L Sbjct: 43 QVQLRRSRVSFTRVQAVFISHLHGDHCLGLIGMISTFGMLGRTATLHVYAPCEFERMLQM 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 K L+ ++ + + + +IP+ R+ GF F Sbjct: 103 QMDMFCKGLEFEVV-----FHAVDTTQHQVIYEDKSLTVASIPLEH---RVPCCGFLF 152 >gi|253699062|ref|YP_003020251.1| ribonuclease Z [Geobacter sp. M21] gi|251773912|gb|ACT16493.1| metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Geobacter sp. M21] Length = 361 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R + ++ D G + + SIDA+ +H H DH G+D + + R ID++ Sbjct: 27 RPTGRALLFDCGK--MHHLAKRVYTSIDAIFISHAHMDHFMGMDSVIRHSHASPRTIDIF 84 Query: 110 AAPDCMKHLFESFR 123 P + F Sbjct: 85 GPPGLADRMGHKFS 98 >gi|114673177|ref|XP_001155672.1| PREDICTED: elaC homolog 1 [Pan troglodytes] Length = 363 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 89/337 (26%), Gaps = 122/337 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLR 100 Query: 116 KHLFES---------FRYC------------------FKALDDRTYPPIVNP--IVIENN 146 ++ + F Y F ++ PP ++ ++ Sbjct: 101 DFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDS 160 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGF------RFGNV--------------AY--- 183 + + H RI S GF R G + AY Sbjct: 161 EENSYLLFDDEQFVVKAFRLFH-RIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKL 219 Query: 184 -------------------------------CTDVNA-FPAESLEKLQNLDFLIIDAL-- 209 D + ++ D LI +A Sbjct: 220 KNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCLEADLLIHEATLD 279 Query: 210 -----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 K H H + + +L K +LTH Sbjct: 280 DAQMDKAKEHG-HSTPQMAATFAKLCRAKRLVLTHFS 315 >gi|307150118|ref|YP_003885502.1| hypothetical protein Cyan7822_0176 [Cyanothece sp. PCC 7822] gi|306980346|gb|ADN12227.1| conserved hypothetical protein [Cyanothece sp. PCC 7822] Length = 253 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 78/245 (31%), Gaps = 32/245 (13%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ V N + L I+ + +++D G D Sbjct: 1 MKLLFLGSGSAFTV--------------GSNNFQSNMLLITE-----EDKKLLIDCGSDI 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + + +I + +H H+DH+ G++ GL F + + ++Y + D +++ Sbjct: 42 RFSLHEVGLSYANITDIYISHLHSDHVGGLEYIGLASKFDPRCQKPNLYLSKDIASEIWD 101 Query: 121 S---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F D +T I+ N I +++ + + + + + G Sbjct: 102 RTLAGGMRFVEGDLKTLNSFFEIYPIKPNGYFIWENLQFNLVKVLHVNSNYCLMPTYGLF 161 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINP 232 F + +D Q D + D H E + + I Sbjct: 162 FEVNQTRIFITSDTQFCLDILKPYYQEADLIFQDCETSKFPTPVHAHYEELVTLPKDIK- 220 Query: 233 KNAIL 237 + L Sbjct: 221 QKMWL 225 >gi|207722883|ref|YP_002253317.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum MolK2] gi|206588067|emb|CAQ18647.1| metal-dependent hydrolase of the beta-lactamase superfamilyIprotein [Ralstonia solanacearum MolK2] Length = 261 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 54/179 (30%), Gaps = 36/179 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S+ ++T +++D G V L S++A+L TH H DH+ Sbjct: 16 ALLVESSDGATSTRILLDCGFGIRETVRRLERLGCAPESLNAILVTHEHGDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM---K 153 Y K I V+ + Y + + + C Sbjct: 71 AYAFAAKYNIPVWTSHGT-------------------YRATASLRGADRAAIRFCRADDV 111 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G + +P H L F F + + TD L L +++ Sbjct: 112 FSIGDLRVLPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTGLHAFVLEC 170 >gi|242373849|ref|ZP_04819423.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis M23864:W1] gi|242348403|gb|EES40005.1| hydroxyacylglutathione hydrolase [Staphylococcus epidermidis M23864:W1] Length = 207 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 12/141 (8%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++ +++D D ++ L + + AVL TH H DHI +D + K + Sbjct: 19 ENDDSVILIDPSSESDKIIKKLNQINKPLKAVLLTHAHYDHIGALDDIV-----TKYDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIV-NPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY D L + + P +V N + N+ P +K + P Sbjct: 74 VYMHEDEFDFLQDPEKNGASKFKQYGMPQVVSNAKPLSINEGPAEIKGFKFNVLHTP--- 130 Query: 167 QHGRISSLGFRFGNVAYCTDV 187 H SL + F A D Sbjct: 131 GHSP-GSLSYVFDEFAVVGDT 150 >gi|219684248|ref|ZP_03539192.1| ribonuclease Z [Borrelia garinii PBr] gi|219685602|ref|ZP_03540418.1| ribonuclease Z [Borrelia garinii Far04] gi|219672237|gb|EED29290.1| ribonuclease Z [Borrelia garinii PBr] gi|219672880|gb|EED29903.1| ribonuclease Z [Borrelia garinii Far04] Length = 319 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 98/334 (29%), Gaps = 95/334 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADH-----------------------IHGIDGLRGYF 99 M + ++++ I + TH HADH I G G++ Y Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKNYT 101 Query: 100 LKQKRPIDVYAA-------------------------PDC-MKHLFESFRYCFKALDDRT 133 + +Y +KH E Y F D Sbjct: 102 KTNIDMLKIYKNYEIIYKEIIIDKTEKIIYEDKTKKIEYTRLKHSIECVGYLFIEKDK-- 159 Query: 134 YPPIVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 P N E ++P G I + + I + VAY TD Sbjct: 160 -PGKFNTEKAEELNIPKGPIRKTLQDGKEILINGKIIKPSEILGESKKGLKVAYITDTGY 218 Query: 190 FPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMH-- 241 F E +++++N + +II++ LK H + + ++ L H Sbjct: 219 F-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGGAANIVKQAKVLQTGLIHFSER 277 Query: 242 ----VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 DL+ P + DGM+ + Sbjct: 278 YTLRKDLENLLKEAKLEYPDGEIFLTKDGMRLEA 311 >gi|239630677|ref|ZP_04673708.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239526960|gb|EEQ65961.1| metal-dependent hydrolase of the beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 269 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 72/234 (30%), Gaps = 45/234 (19%) Query: 38 TRSSLKISRVSERGS-----NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + V+VD G + MQ + + +D+V TH H+D Sbjct: 7 MRVSVLASSSSGNATYIETPGHKVLVDAGLSGKKIETLMQSIGRDLTDVDSVFITHEHSD 66 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ G+ L ++ + VYA L +S + + D Sbjct: 67 HVRGVGVLA----RRYPKLSVYANAKTFAALPKSVGKI----PEDQLRLFDMGATLTLGD 118 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + A Q H + TD +++ D +++ Sbjct: 119 LDVESFGVSHDAAAPQFYQFHHDGKT-------FTILTDTGYVSDRVAGTIRDADAYVME 171 Query: 208 A------LKNGLHS-----------SHFSLS---ESLKKIELINPKNAILTHMH 241 L+ G + H S ++L + + K L H+ Sbjct: 172 CNHDLEMLRTGPYPWPLKQRILGDQGHLSNEDGADALMDVIGLRTKRIYLGHLS 225 >gi|238926245|ref|ZP_04658005.1| beta-lactamase domain protein [Selenomonas flueggei ATCC 43531] gi|238885925|gb|EEQ49563.1| beta-lactamase domain protein [Selenomonas flueggei ATCC 43531] Length = 313 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 V++DTG ++ + V IDAV+ THPHADHI G+ Sbjct: 68 ETQNVLIDTGDLDERDKLRAELDKAGVKKIDAVILTHPHADHIGGM 113 >gi|189467748|ref|ZP_03016533.1| hypothetical protein BACINT_04140 [Bacteroides intestinalis DSM 17393] gi|189436012|gb|EDV04997.1| hypothetical protein BACINT_04140 [Bacteroides intestinalis DSM 17393] Length = 349 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 101/316 (31%), Gaps = 85/316 (26%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 47 EKFELHILGCGSAL----------------PTTRHFATSQVVNV-----RDKLYMIDCGE 85 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGL------------------------- 95 +Q R + ++ + +H H DH G+ GL Sbjct: 86 GSQLQFRKSRLKFSRLNHIFISHLHGDHCFGLLGLISTLNLLGRTAELHIHSPKGLEALF 145 Query: 96 ---RGYFLKQ------------KRPIDVYAAPD---CMKHLFESFRYCFKALDDRTYPPI 137 +F +Q K P +Y L C ++ P Sbjct: 146 VPMLSFFCRQMTYQVLFHEFETKEPGMIYEDRSLTVTTIPLRHRMPCCGFLFAEKQRPNH 205 Query: 138 VNPIVIENNDVPICM--KSAGGVIEAIPILQQHGRISSLGFRF------GNVAYCTDVNA 189 + +++ +VP+ + G P G+I S + AYC+D Sbjct: 206 IIREMVDFYEVPVYELNRIKNGEDYVTP----EGKIVSNSLLTRPSDPPRSYAYCSDTIY 261 Query: 190 FPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 P E+++ +D L +A L + H + +++ + + K ++ H Sbjct: 262 MPE-IAEQIKGVDLLFHEATFANADLPRAKETFHTTAAQAGEIAKAAGVKKMVIGHFSAR 320 Query: 244 LDYDMVLKSTPSRVVP 259 + + +L S V P Sbjct: 321 YEDENILLKEASAVFP 336 >gi|154316295|ref|XP_001557469.1| hypothetical protein BC1G_03733 [Botryotinia fuckeliana B05.10] gi|150846519|gb|EDN21712.1| hypothetical protein BC1G_03733 [Botryotinia fuckeliana B05.10] Length = 444 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 90/267 (33%), Gaps = 58/267 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R S + R+ E G + D G + Sbjct: 155 EVITLGTGSAL----------------PSKYR-NVSATLLRIPEYG---NYLFDAGENTL 194 Query: 66 MQVLREQVLSIDAVL-------YTHPHADHIHGIDGLRGYFL--------KQKRPIDVYA 110 Q+ R + VL +H HADH G + + + + V A Sbjct: 195 GQLKRVFGKDLPGVLSNLKAIWISHLHADHHLGTTSVIKAWHEETSKNEATRNNKLAV-A 253 Query: 111 APDCMKHLFESFR----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + M H + Y F+ L+ P VN + E IEA + Sbjct: 254 SDHGMIHWLTEYSEVENYGFERLELVEMTPAVNGLYEEFTPE-KTEAFGLSSIEACQVSH 312 Query: 167 QHGRISS-----LGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH------ 214 HG ++ GF+ VAY D P++ ++ + LI +A + Sbjct: 313 CHGALAVALNFPNGFK---VAYSGDCR--PSQDFVRIGKGATLLIHEATFDDELQGDAIA 367 Query: 215 SSHFSLSESLKKIELINPKNAILTHMH 241 H + SE++ + + + +LTH Sbjct: 368 KKHSTTSEAMNIGKGMGARRILLTHFS 394 >gi|160903332|ref|YP_001568913.1| beta-lactamase domain-containing protein [Petrotoga mobilis SJ95] gi|160360976|gb|ABX32590.1| beta-lactamase domain protein [Petrotoga mobilis SJ95] Length = 451 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 23/200 (11%) Query: 52 SNTTVIVD-----TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +N +++D G D + + V I+ ++ THP ADHI G+D + F + Sbjct: 93 NNVDILIDGGNNWYGDDVVTYLKSQDVDDIEYLIATHPDADHIGGLDDVLKAFEVE---- 148 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +VYA PD + + ++ TY +I + + + + Sbjct: 149 NVYA-PDVSHTTKTYNDFVLEVRNEGTYIKTAKAGITLINPALAAVIGCPSFSNVYFVGP 207 Query: 165 LQQHGR-----ISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 ++ +G + + FGN +Y D + + + + N FL D LK G H S Sbjct: 208 VKNYGTDLNSWSAVMKLDFGNSSYLFTGDADRISEK--DMIDNSMFLKADVLKVGHHGSD 265 Query: 218 FSLSESLKKIELINPKNAIL 237 S S+ + ++ +NPK A++ Sbjct: 266 SSTSQ--EFLKEVNPKYAVI 283 >gi|66357066|ref|XP_625711.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|46226650|gb|EAK87629.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II] Length = 309 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 50/165 (30%), Gaps = 41/165 (24%) Query: 2 KDYYHFT-ILGCGASLGVPRI------------TGD--WGACDPT---NPKNRRTRSSLK 43 +D F LG G G P + D G C + KN R S+ Sbjct: 10 RDMSSFILFLGSGTEQGTPNLEHVFKNIDNVNKGNDPFCGICQESIKMKNKNVRNPFSIL 69 Query: 44 ISRV------SERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGID 93 I SE + T + + G F + +L + +DA+ +GID Sbjct: 70 IKNPVSNLNSSESERHDTFLFEIGSTFRISMLEYAIPANINRLDAIFCMGSDESSFNGID 129 Query: 94 GLR-------------GYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 R F + K + +Y + + + Y Sbjct: 130 ETREVQKYERPVGNDGIVFYEPKIRVPIYFTSSALNKFNDWYSYI 174 >gi|281491008|ref|YP_003352988.1| metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis KF147] gi|281374766|gb|ADA64286.1| Metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis KF147] Length = 210 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +I+D G D + R ++ +I A+L TH H DHI G++ LR K + +Y Sbjct: 23 SHLIIDPGSDSSALLERLKITDKTISAILLTHAHFDHIMGLNELR----KHFPDVPIYLH 78 Query: 112 PD 113 D Sbjct: 79 SD 80 >gi|222106623|ref|YP_002547414.1| metal dependant beta lactamase protein [Agrobacterium vitis S4] gi|221737802|gb|ACM38698.1| metal dependant beta lactamase protein [Agrobacterium vitis S4] Length = 276 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 25/214 (11%) Query: 46 RVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + R +I D G ++ ++ ++D + ++H H DHI G+ + Sbjct: 33 CIEVRCGEHRLIFDAGSGIRQAGLDMMGDKTSNVD-LFFSHCHYDHIIGLPFFKPI-YNP 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV---PICMKSAGGVI 159 + +++++ + + F + + ++ +D I G I Sbjct: 91 EITVNIWSGHLAGSMTTDQMIHQFVSPPYFPVKMDICKASLQFHDFRAGDILTPRPGISI 150 Query: 160 EAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAE----SLEKLQNLDFLIIDA--- 208 + G +G+R +A D+ P E +L + N D + DA Sbjct: 151 GTFALDHPGG---CIGYRVEWAGKVLALVFDIEHQPGELDPTALALMANADIAVYDAAFT 207 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H S + +K E N +L H Sbjct: 208 EAEMQRYRGFGHSSWEQGVKLAEQANVGQLLLFH 241 >gi|261406803|ref|YP_003243044.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261283266|gb|ACX65237.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] Length = 557 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 49/154 (31%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 V++D G F + L + + A++ TH H DHI GI Sbjct: 29 DQDIVVIDCGSKFPDENLPGIDLIVPDFTYLLDNADKVRALVVTHGHEDHIGGIP----- 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ PI VY ++ + L + I+ N G Sbjct: 84 YLLRQLPIPVYGTKLTIELIK-------IKLKEHRILRNSELHTIDANS-----TIQAGA 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I A H +G F GNV + D Sbjct: 132 IHASFFSTSHSIPDCVGIVFQTPEGNVVHTGDFK 165 >gi|222481275|ref|YP_002567511.1| exonuclease of the beta-lactamase fold class-like protein [Halorubrum lacusprofundi ATCC 49239] gi|222454651|gb|ACM58914.1| exonuclease of the beta-lactamase fold class-like protein [Halorubrum lacusprofundi ATCC 49239] Length = 791 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 51/160 (31%), Gaps = 15/160 (9%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIH 90 NP N S + + ++VD G + L + A+ TH H DH Sbjct: 8 ANPNN--GNESFLLRFGTGGAETACILVDAGDGVDLDSLLSPSDKLVAICLTHAHVDHYA 65 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 + + + +Y +P L + F D + + I ++ + Sbjct: 66 ELTAA------HRGDVPIYTSPATATILDDVFDVATNKYDITASEAVTSAITPIDDWTDV 119 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 IE P+ H ++GF F V D + Sbjct: 120 VP-----DIEIHPVPAGHVP-GAVGFLF-RVTDDDDTHHI 152 >gi|116496226|ref|YP_807960.1| beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|191639751|ref|YP_001988917.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus casei BL23] gi|227532782|ref|ZP_03962831.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|301067828|ref|YP_003789851.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei str. Zhang] gi|116106376|gb|ABJ71518.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei ATCC 334] gi|190714053|emb|CAQ68059.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus casei BL23] gi|227189616|gb|EEI69683.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|300440235|gb|ADK20001.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus casei str. Zhang] gi|327383864|gb|AEA55340.1| Metallo-beta-lactamase domain protein [Lactobacillus casei LC2W] gi|327387045|gb|AEA58519.1| Metallo-beta-lactamase domain protein [Lactobacillus casei BD-II] Length = 272 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 72/234 (30%), Gaps = 45/234 (19%) Query: 38 TRSSLKISRVSERGS-----NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + V+VD G + MQ + + +D+V TH H+D Sbjct: 10 MRVSVLASSSSGNATYIETPGHKVLVDAGLSGKKIETLMQSIGRDLTDVDSVFITHEHSD 69 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ G+ L ++ + VYA L +S + + D Sbjct: 70 HVRGVGVLA----RRYPKLSVYANAKTFAALPKSVGKI----PEDQLRLFDMGATLTLGD 121 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + A Q H + TD +++ D +++ Sbjct: 122 LDVESFGVSHDAAAPQFYQFHHDGKT-------FTILTDTGYVSDRVAGTIRDADAYVME 174 Query: 208 A------LKNGLHS-----------SHFSLS---ESLKKIELINPKNAILTHMH 241 L+ G + H S ++L + + K L H+ Sbjct: 175 CNHDLEMLRTGPYPWPLKQRILGDQGHLSNEDGADALMDVIGLRTKRIYLGHLS 228 >gi|320546497|ref|ZP_08040812.1| ribonuclease Z [Streptococcus equinus ATCC 9812] gi|320448882|gb|EFW89610.1| ribonuclease Z [Streptococcus equinus ATCC 9812] Length = 309 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + N + D G Sbjct: 1 MELQFLGTG-----------------AGQPSKSRNVSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QRQILETTIRPRKIKRIFITHLHGDHIFGLPGFLASRAFQANEEQTDLDLYGPVGIRSYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L L P ++ + N++ M++ V+ A + I + Sbjct: 103 LNSLR---------LSGARLPYRIHFHEFDENNLGKIMETDKFVVYAEKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|229552154|ref|ZP_04440879.1| ribonuclease Z [Lactobacillus rhamnosus LMS2-1] gi|258539568|ref|YP_003174067.1| ribonuclease Z [Lactobacillus rhamnosus Lc 705] gi|229314456|gb|EEN80429.1| ribonuclease Z [Lactobacillus rhamnosus LMS2-1] gi|257151244|emb|CAR90216.1| Ribonuclease Z [Lactobacillus rhamnosus Lc 705] Length = 319 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 77/291 (26%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + ER N + D G Sbjct: 1 MEIQFLGTGAGS----------------PSKVRNVSSLALKLLDER--NEVWLFDVGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP----DCMK 116 Q+L+ + I V TH H DHI G+ G Q P+ +Y P Sbjct: 43 QHQILQTTIKPRKIAKVFITHLHGDHIFGLPGFLASRANQGGTEPLTIYGPPGIEDFVKT 102 Query: 117 HLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 L S + F L + + + + S G +E P Sbjct: 103 SLKVSQSHLSYAIKFVLLRHPGVIFDDQTFKVSFDRLDHRITSFGFRVEEKPHPGELLID 162 Query: 166 ------QQHGRISSLGFRFGNVAYCTDVNAFPA-----------------------ESLE 196 G + + + G D F +L Sbjct: 163 KVRAAKIPAGPVYAS-LKAGKTVTLPDGRTFDGHDFIGSAQPGRTVAIFGDTRMCRRALP 221 Query: 197 KLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ D + H + ++ + + +L H+ Sbjct: 222 LAAGADVLVHESTFGPDESQLAKQYYHSTNLQAAELAKRAGVGRLLLNHIS 272 >gi|241888625|ref|ZP_04775932.1| ribonuclease Z [Gemella haemolysans ATCC 10379] gi|241864648|gb|EER69023.1| ribonuclease Z [Gemella haemolysans ATCC 10379] Length = 306 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 100/318 (31%), Gaps = 78/318 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + + + + + D G Sbjct: 1 MEVQFLGTGA--GLPA---------------KFRNTQSFVFNFMQE-LKECWMFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP-IDVYAAPDCMKHL 118 Q+L+ + I + +H HADH+ G+ G R + L + +Y + Sbjct: 43 QHQILKTNIKPTKITKIFISHLHADHVLGLIGFLSSRSFLLDTNASKVTIYGPVGIKDFI 102 Query: 119 FESF-------RYCFKALDDRTYPPIVN-----------PIVIENNDVPICMKSAGGVIE 160 ++ Y + ++ + I++ +E I K G ++ Sbjct: 103 EKNMMFTHCSLSYSVEYIEISSEQCIIDNKTVTVFSYPLAHNVECFGYKIIFKKQKGSLD 162 Query: 161 --------AIPILQQHGRISSLGFRFGNVAYCTD-----------VNAFPAESL-----E 196 +P S F F Y + ++ P E Sbjct: 163 ADKLRELGIMPGPFYREIKESDTFEFNGKVYNSSEFLSEDKPGKEISIIPDTRYFEGLNE 222 Query: 197 KLQNLDFLIIDA---LKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYD-- 247 ++N + +I + LK H + H S+ + K IE +N LTH+ D + Sbjct: 223 FVKNSNIIITECTYLLKEDAHHARKNYHLSILDVEKMIENSKVENLFLTHISARYDRNIE 282 Query: 248 -MVLKSTPSR--VVPAFD 262 V++S + V A D Sbjct: 283 KDVVESLCDKCSVKIAHD 300 >gi|254472603|ref|ZP_05086002.1| metal-dependent Hydrolase of the beta-lactamase superfamily III [Pseudovibrio sp. JE062] gi|211958067|gb|EEA93268.1| metal-dependent Hydrolase of the beta-lactamase superfamily III [Pseudovibrio sp. JE062] Length = 244 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 75/240 (31%), Gaps = 26/240 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 T SSL IS + +++D GP + + I + +H H DH G+ L Sbjct: 17 TNSSLLISE-----GDFKLLIDCGPTVPQALFAYGMKADDISCIYISHCHPDHCLGLTTL 71 Query: 96 RGYF--LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 Y K+ +P+ +Y + L+ F ++ ++ E Sbjct: 72 LNYMKSFKRSKPLTIYRQASQHQALYRLME--FAYWPEKDLGFDLHWQDSEEL------- 122 Query: 154 SAGGVIEAIPILQQHG-RISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 SA G A H SL + + + Y D + E D I+ Sbjct: 123 SAVGPWRAETTPSNHSVPNRSLQLKSDSEVLFYSGD-GLLSPKGEELAAQADLAFIECEY 181 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMH--VDLDYDMVLKSTPSRVVPAFDGMQFSS 268 + H S ++ +L H+ +K P DG +F Sbjct: 182 MTADNGHGSWADVKGLQRKAG-SRWVLYHIDDASRPAVAAAIKEYPE-FSLGEDGREFEL 239 >gi|12804973|gb|AAH01939.1| ElaC homolog 2 (E. coli) [Homo sapiens] gi|13278771|gb|AAH04158.1| ElaC homolog 2 (E. coli) [Homo sapiens] gi|48146639|emb|CAG33542.1| ELAC2 [Homo sapiens] gi|325463493|gb|ADZ15517.1| elaC homolog 2 (E. coli) [synthetic construct] Length = 826 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 478 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 517 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 518 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 576 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 577 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 636 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 637 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 691 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 692 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 749 Query: 264 MQF 266 M+ Sbjct: 750 MKV 752 >gi|145553959|ref|NP_060597.4| zinc phosphodiesterase ELAC protein 2 isoform 1 [Homo sapiens] gi|41017788|sp|Q9BQ52|RNZ2_HUMAN RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Heredity prostate cancer protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|10880933|gb|AAG24441.1|AF304370_1 putative prostate cancer susceptibility protein HPC2/ELAC2 [Homo sapiens] gi|119610368|gb|EAW89962.1| elaC homolog 2 (E. coli), isoform CRA_b [Homo sapiens] Length = 826 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 478 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 517 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 518 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 576 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 577 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 636 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 637 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 691 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 692 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 749 Query: 264 MQF 266 M+ Sbjct: 750 MKV 752 >gi|298243990|ref|ZP_06967797.1| beta-lactamase domain-containing protein [Ktedonobacter racemifer DSM 44963] gi|297557044|gb|EFH90908.1| beta-lactamase domain-containing protein [Ktedonobacter racemifer DSM 44963] Length = 317 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 43/229 (18%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE----SFRYCFKALDDRT 133 A+ TH H DH+ G + + + ++ +++ + + +D R Sbjct: 76 ALFITHGHGDHLVGFPFFAPL-FEARTKLHLFGPDLAGQNIEQLVTPLMSPPYFPVDMRQ 134 Query: 134 YPPIVNPIVIENN-------------DVPICMKSAGGVIEAIP-ILQQHGRISSLGFRFG 179 P + + + A G + + + Q H + + +R Sbjct: 135 LPSQRTFHTLCDTQCVAWRAGSPALEESAEGNAGAEGELRVVAKLTQCHPQNGACIYRIE 194 Query: 180 ----NVAYCTDV---NAFPAESLEKLQNLDFLIIDA------LKNGLHS-SHFSLSESLK 225 + Y TDV AE ++ ++ D LI DA + H H +++ + + Sbjct: 195 YAGKRIVYATDVEWKEGSDAEFVQFIEGADLLIHDAQYTVTDYQQEKHGFGHSTIAMATE 254 Query: 226 KIELINPKNAILTHMHVDLDYDMVLKSTPS--------RVVPAFDGMQF 266 L + +L H + YD A +GM+ Sbjct: 255 AARLAQVRELVL--FHHEPTYDDNQLDLMEAEARAQFAHTRSACEGMEI 301 >gi|14600273|gb|AAK71321.1|AF393849_3 CovX [Streptococcus mutans] Length = 266 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 50/221 (22%) Query: 52 SNTTVIVDTGPDFY--MQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q++ E +V +DA+L TH H DHIHG+ Sbjct: 25 PQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVG---VLARNM---- 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + C S+ + +D + + + G I+ Sbjct: 78 -VWMSMRCSN--MASYGWHVGKIDVS-----------QKHIFDLGKTITFGDIDIESFGV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD-FLI-----IDALKNGLHS- 215 H +R + TD + ++N D +LI I+ L++G++ Sbjct: 124 SHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLIENADGYLIESNHDIEILRSGIYPW 183 Query: 216 ----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 H S + + + + K L H+ + Sbjct: 184 SLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKE 224 >gi|317497007|ref|ZP_07955335.1| ribonuclease Z [Lachnospiraceae bacterium 5_1_63FAA] gi|316895667|gb|EFV17821.1| ribonuclease Z [Lachnospiraceae bacterium 5_1_63FAA] Length = 304 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 55/254 (21%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++ R + ++++D G + + V +DA+ +TH HADHI G+ GL Sbjct: 20 LTACMTRFNGHSLLIDCGEGTQVGIKERGWSVKPLDAICFTHFHADHISGLPGLLLTLGN 79 Query: 102 QKRP-----IDVYAAPDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 +R I + L F F L+++ + ++ IE V Sbjct: 80 AERTEPLLIIGPKGVERVVNSLRVIAPELPFPIEFYELNEKEHVIEMDGYKIEAFYVKHN 139 Query: 152 MKSAGGVIEAI---------------------------PILQQHGRISSLGFRFG----- 179 + G + + + GR+ + G Sbjct: 140 VPCYGYNMIITRAGKFDPVKAKENDIPMKYWNRLQKGETVTSEDGRVLTSDMILGSPRPG 199 Query: 180 -NVAYCTDVNAFPAESL-EKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELI 230 + YCTD P +++ E +N D I + + K H + E+ + Sbjct: 200 IKLTYCTDTR--PVQTISEHAKNADLFICEGMYGEEGKEKKAREYKHMTFYEAAHLAKEA 257 Query: 231 NPKNAILTHMHVDL 244 + K LTH L Sbjct: 258 DVKQMWLTHYSPSL 271 >gi|68075587|ref|XP_679713.1| Pb-reticulocyte binding protein [Plasmodium berghei strain ANKA] gi|56500520|emb|CAH96719.1| Pb-reticulocyte binding protein [Plasmodium berghei] Length = 605 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 30/128 (23%) Query: 2 KDYYHFTILGCGA-----SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV 56 K + LG G+ S G +S I + +++ N Sbjct: 78 KSDWKIIFLGTGSMYPSISRG----------------------TSSFIFQTTKKKYNEAY 115 Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 + D G + ++ + + + I + TH H DH G+ + LK + I++Y Sbjct: 116 LFDCGENTFISLQKANIKISKIKNIFITHLHGDHCLGLISVLT-MLKNLKTINIYGPEGI 174 Query: 115 MKHLFESF 122 + L +F Sbjct: 175 YRFLKNNF 182 >gi|260166622|ref|NP_776065.1| zinc phosphodiesterase ELAC protein 2 isoform 2 [Homo sapiens] gi|119610370|gb|EAW89964.1| elaC homolog 2 (E. coli), isoform CRA_d [Homo sapiens] Length = 825 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 477 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 516 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 517 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 575 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 576 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 635 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 636 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 690 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 691 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 748 Query: 264 MQF 266 M+ Sbjct: 749 MKV 751 >gi|34530734|dbj|BAC85964.1| unnamed protein product [Homo sapiens] Length = 454 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 106 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 145 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 146 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 204 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 205 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 264 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 265 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 319 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 320 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 377 Query: 264 MQF 266 M+ Sbjct: 378 MKV 380 >gi|199598729|ref|ZP_03212143.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] gi|258508359|ref|YP_003171110.1| ribonuclease Z [Lactobacillus rhamnosus GG] gi|199590417|gb|EDY98509.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Lactobacillus rhamnosus HN001] gi|257148286|emb|CAR87259.1| Ribonuclease Z [Lactobacillus rhamnosus GG] gi|259649673|dbj|BAI41835.1| hydrolase [Lactobacillus rhamnosus GG] Length = 319 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 77/291 (26%), Gaps = 73/291 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + ER N + D G Sbjct: 1 MEIQFLGTGAGS----------------PSKVRNVSSLALKLLDER--NEVWLFDVGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP----DCMK 116 Q+L+ + I V TH H DHI G+ G Q P+ +Y P Sbjct: 43 QHQILQTTIKPRKIAKVFITHLHGDHIFGLPGFLASRANQGGTEPLTIYGPPGIEDFVKT 102 Query: 117 HLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL------ 165 L S + F L + + + + S G +E P Sbjct: 103 SLKVSQSHLSYAIKFVLLRHPGVIFDDQTFKVSFDRLDHRITSFGFRVEEKPHPGELLID 162 Query: 166 ------QQHGRISSLGFRFGNVAYCTDVNAFPA-----------------------ESLE 196 G + + + G D F +L Sbjct: 163 KVRAAKIPAGPVYAS-LKAGKTVTLPDGRTFDGHDFIGSAQPGRTVAIFGDTRMCRRALP 221 Query: 197 KLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ D + H + ++ + + +L H+ Sbjct: 222 LAAGADVLVHESTFGPDESQLAKQYYHSTNLQAAELAKRAGVGRLLLNHIS 272 >gi|325684269|gb|EGD26442.1| ribonuclease Z [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 309 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG C P R SSL + + E + D G Sbjct: 1 MELEFLGT---------------C-SGQPSKLRNVSSLALKLLDELNEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + + +E + + E H RI S GFR Sbjct: 102 TSLR---ISKTKISYP--IKFVTLEEGGKIVSERG----FEVYTEKLDH-RIDSWGFRV 150 >gi|302878924|ref|YP_003847488.1| beta-lactamase domain-containing protein [Gallionella capsiferriformans ES-2] gi|302581713|gb|ADL55724.1| beta-lactamase domain protein [Gallionella capsiferriformans ES-2] Length = 295 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 66/228 (28%), Gaps = 44/228 (19%) Query: 50 RGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +I+D G Q L + + + TH H DHI G+ F+ I Sbjct: 33 SDDNQLIILDGGTGIFPLAQSLLKNLPVTAHIFNTHSHWDHIQGLPFFIPIFIP-GNTIK 91 Query: 108 VYA--APDCMKHLFESFRYCFKALDDRTYPPIVNPIV---IENNDVPICMKSAGGVIEAI 162 +Y P ++ P+ + E + G Sbjct: 92 LYGARDPVTGDGPER----IINVQLQYSFFPVREAEIQSRFEYVSLMPNTPLTLGDATIT 147 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDVNA------------------FPAESLEK--- 197 P L H I+ LG+R ++ + D A + L Sbjct: 148 PTLLNHPVIN-LGYRIDCNGKSIFFTGDHEAHFNIYDLEDEGYAEYQALIDEQCLAIVNA 206 Query: 198 LQNLDFLIIDALK-NGLHSS-----HFSLSESLKKIELINPKNAILTH 239 ++ +D LI D H + H + S+K K TH Sbjct: 207 VRGVDVLIADCSYTPEEHRAKIGWGHGTFDSSIKLALNAGAKVLYCTH 254 >gi|303240470|ref|ZP_07326987.1| ribonuclease Z [Acetivibrio cellulolyticus CD2] gi|302592035|gb|EFL61766.1| ribonuclease Z [Acetivibrio cellulolyticus CD2] Length = 321 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 84/267 (31%), Gaps = 79/267 (29%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQV-LR---EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ R + V++D G Q+ LR SIDA+L+TH HADH G+ GL Sbjct: 37 WLTAFLVRYNGRMVLIDCGEG--TQIPLRKAEWGFKSIDAILFTHYHADHTAGLPGLLLT 94 Query: 99 FLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 R P+ + P + + P + I ++ + + +G Sbjct: 95 LGNSGREEPLTLVGPPGLKNVVEGL------TVVSPQLPYELRLIELKEDQCS-EILISG 147 Query: 157 GVIEAIPILQQHGRISSLGF-----RFGNV------------------------------ 181 I+++P+ I L + R G Sbjct: 148 LSIKSMPVDH---SIPCLSYCIELKRQGKFEVERARNLNIPVTFWGSLQKGDSITFEGRT 204 Query: 182 ----------------AYCTDVNAFPAESLE-KLQNLDFLIIDALKNGLHSS-------H 217 YCTD P E+LE ++N D + + + G S H Sbjct: 205 ISPDMVMGKERKGIKVCYCTDTR--PTEALEDFVKNADLFVCEGMYGGEEESSKAVQKKH 262 Query: 218 FSLSESLKKIELINPKNAILTHMHVDL 244 + E+ K LTH L Sbjct: 263 MTFIEAATLASKGEVKELWLTHYSPSL 289 >gi|170090794|ref|XP_001876619.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648112|gb|EDR12355.1| predicted protein [Laccaria bicolor S238N-H82] Length = 406 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 41/168 (24%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ 67 T LG ++ P + R S+L + + + D G Q Sbjct: 37 TFLGTASAQ----------------PSSTRNHSALALRVGGDVW-----LFDCGEATQHQ 75 Query: 68 VLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR------------------PID 107 + + V I+ + TH H DHI G+ L L P++ Sbjct: 76 IQKSNVKMGKIEKIFVTHTHGDHIFGLIPLLASCLNGAGGAADGAEDARAQADTTIPPLE 135 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +Y ++ +Y L R + + + +A Sbjct: 136 IYGPAGTRGYVRSGLKYTHSLLGKRYVVHELRFPSDPQEEEVFPLGNA 183 >gi|95929941|ref|ZP_01312681.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95133910|gb|EAT15569.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 275 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Query: 52 SNTTVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + + ++DTG F +VL + + D V+ +H H DH G++ L+ + + Sbjct: 30 DDGSFLIDTGQGFGIIQNARVLEKDLSQFDGVVLSHGHYDHAGGLE----AVLRVRGEVP 85 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 VYA PD + F + + + ++ + + ++ P + A V Sbjct: 86 VYAHPDIFEPRFSRTPHSLRFIGIPQRRELLETLGAQFHETPQFQQIAEQVF 137 >gi|313892871|ref|ZP_07826448.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442224|gb|EFR60639.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 268 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 32/172 (18%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H+DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMAQVEGIFISHEHSDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNQLIELTKGSLTL----GNLIVEPFAV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 H +G TD L ++ + L+++A H Sbjct: 124 SHDAADPIGINVFAGKDKATVVTDTGVISDSILHRMDDTTLLVLEA-NYDPH 174 >gi|292670231|ref|ZP_06603657.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292648183|gb|EFF66155.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 303 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 + V++DTG ++ + V IDAV+ THPHADHI G+ Sbjct: 56 QSGGHNVLIDTGDLDEREKLRAELSKAAVKKIDAVILTHPHADHIGGM 103 >gi|213582100|ref|ZP_03363926.1| ribonuclease Z [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 178 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP R + + + + D G Sbjct: 1 MELIFLGT--SAGVPT---------------RSRNVTAILLHLQHPTQPGVWLFDCGEGT 43 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q+L ++ + +H H DH+ G+ GL P+ VY + + Sbjct: 44 QHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIAT 103 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P+ IE + G+ + +H + G+R Sbjct: 104 TLR--------LSGSWTDFPLQIEEISAGDILDD--GLRKVTAFRLEH-PLECYGYRV 150 >gi|260906181|ref|ZP_05914503.1| hypothetical protein BlinB_12702 [Brevibacterium linens BL2] Length = 273 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 72/229 (31%), Gaps = 41/229 (17%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I E+ T V++D G + R + AV+ +H H DH + G ++K Sbjct: 23 LIETDEEK--PTRVVLDLGSGALSPLQRAVDTDGLSAVVLSHLHPDHCM---DMTGLYVK 77 Query: 102 Q-----------------KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN----P 140 + V+A + L ++ + + Sbjct: 78 HCYDPKFFNGNISDTGSIRTRTSVFAPAGAQERLTRAY---YTDPGKSPVAASAHDSDLS 134 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESL 195 ++ D+ G + L H + + R + + Y D + + Sbjct: 135 HALDFTDIDHGTSHQVGSLTIESFLVDH-PVEAYALRITDAKGAVITYSGD-SDECDNLV 192 Query: 196 EKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + D + +A ++ H + + + + + K+ +LTH+ Sbjct: 193 AAARGADLFLCEAAFQEDRDTARGIHLTGKRAGRVAQAADAKSLVLTHI 241 >gi|194390130|dbj|BAG61827.1| unnamed protein product [Homo sapiens] Length = 811 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 463 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 502 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 503 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 561 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 562 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 621 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 622 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 676 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 677 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 734 Query: 264 MQF 266 M+ Sbjct: 735 MKV 737 >gi|116251482|ref|YP_767320.1| beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256130|emb|CAK07211.1| putative beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 556 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 47/228 (20%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + VYA+ L + + + P V Sbjct: 80 DHYGALADLWP-----GLNVPVYASGFTAGLLEAKRNFEKAKIGEVPVTPFKAGDTINVG 134 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P+ G + G ++ ++ TD Sbjct: 135 PFSIEGVAVNHSIPEPMSLMIRTPV----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 185 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +L + L + +AL++G+ S +SESL+KI +T Sbjct: 186 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIENAEGRVAIT 233 >gi|110678483|ref|YP_681490.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter denitrificans OCh 114] gi|109454599|gb|ABG30804.1| coenzyme PQQ biosynthesis protein B [Roseobacter denitrificans OCh 114] Length = 297 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 98/309 (31%), Gaps = 68/309 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKN--RRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG A G+P+ C+ +T+SS+ ++ E + PD Sbjct: 7 ILGAAAGGGLPQWNCGCDNCNLARAGEIPAQTQSSIAVTADGESWAILN----ASPDIRH 62 Query: 67 QV----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Q+ LRE L + +VL T+ DH+ G+ L++ +P ++A + Sbjct: 63 QMADCAALHPSGLRE--LPLRSVLVTNGDIDHVAGL-----LTLREMQPFTLFATAGIHE 115 Query: 117 HLFESFRYCFKALDDRTY--------------PPIVNPIVIENNDVPICMKSAGGVIEAI 162 L ++ F AL+ R P + + VP+ ++ + I Sbjct: 116 VLAQNP--IFDALNSRVVVRETIALDAPYELAPGLTATLFAVPGKVPLYLEGETVQTDLI 173 Query: 163 PILQQHGRISSLGFRFGNVA-YCTDVNAFPAESLEKLQNLDFLIIDAL------------ 209 Q G G A Y + +L D L D Sbjct: 174 G-DQTVGVKLETG---TKTAFYIPGCAMLNDDLRGRLDGADLLFFDGTLWQDDEMVRANL 229 Query: 210 --KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLD------YDMVLKSTPSRVV 258 K G H S+ S+ E + I HM+ + + + Sbjct: 230 GQKTGKRMGHMSISGPDGSIAAFEGLAIGKKIFVHMNNTNPVLRPTSAEKAQAEA-AGWI 288 Query: 259 PAFDGMQFS 267 DGM+ + Sbjct: 289 IGQDGMEIT 297 >gi|325473715|gb|EGC76904.1| ribonuclease Z [Treponema denticola F0402] Length = 247 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 35/177 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG + +P R +S+ + R + + D G + + Sbjct: 7 ILGCGGMMPLP----------------YRHLTSVLLRREGDL-----FLFDCGEGTQVAL 45 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESFRY 124 R + I+A+ +H HADHI G+ GL + R +Y P +++ S Sbjct: 46 RRLNLRWKRINAIFISHTHADHITGLPGLLMLSSQVDREEPLYIIGPPKVAEYVETS--- 102 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + +N +I + + + H + +G+ F Sbjct: 103 ------RKVLDMYINYEIIVKEIKEPGIVYSTEEFQVRSFWLDHTK-PCMGYTFEEF 152 >gi|224370802|ref|YP_002604966.1| hypothetical protein HRM2_37440 [Desulfobacterium autotrophicum HRM2] gi|223693519|gb|ACN16802.1| hypothetical protein HRM2_37440 [Desulfobacterium autotrophicum HRM2] Length = 277 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 30/212 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL---KQKRPIDV 108 S T+I+D G + ++ TH H DH+ G + + F + Sbjct: 35 SGETLIIDAGTGIRELGESLGNKANCYLILTHAHLDHVAGFNFFKPLFHSDSVVEIQNSC 94 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + ++++ + P + V D+ +E I + + Sbjct: 95 F-SGVTVENILNT---LMSPPLFPITPKDLKATVRYRTDLTGTFSIGSLTVETIALSHPN 150 Query: 169 GRISSLGFRFG----NVAYCTDVNAFP---------AESLEKLQNLDFLIIDA------L 209 G GFR + TD N + + +N D L DA Sbjct: 151 GG---FGFRVTEADRRFVFLTD-NEIGFDHGGGAGFDDYISFARNADLLFHDAEFTPDEY 206 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + H + E+L K L H++ Sbjct: 207 RLRRGWGHSTYIEALDLALRSGVKRLGLFHLN 238 >gi|163814049|ref|ZP_02205441.1| hypothetical protein COPEUT_00202 [Coprococcus eutactus ATCC 27759] gi|158450498|gb|EDP27493.1| hypothetical protein COPEUT_00202 [Coprococcus eutactus ATCC 27759] Length = 265 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 82/239 (34%), Gaps = 52/239 (21%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT ++VD G + E + ++ +L TH H DH+ GI L +K + Sbjct: 20 DNTHLLVDAGISCKRVETALKDEGLKPSELNGILVTHEHIDHVKGIG-----VLARKHGV 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + ++ + +++ K I P Sbjct: 75 PIYATAGTIMEMKNM-----------SSLGSIDEGLF--HEIRPDEKILINDIIVDPSSI 121 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H + + ++ TD+ F ++KL N D ++++A L+ G + Sbjct: 122 WHDATDPVCYSLYGDGKKISIATDMGNFNDYIVDKLDNSDIMVVEANHDVRMLEAGSYPY 181 Query: 216 ----------SHFSLSESLKKIELI---NPKNAILTHMHV-----DLDYDMVLKSTPSR 256 H S S + I + + K +L H+ +L Y+ V Sbjct: 182 YLKRRILGNYGHLSNELSGQLIYRLLNDHVKGILLGHLSKENNFEELAYETVKLELADN 240 >gi|119610367|gb|EAW89961.1| elaC homolog 2 (E. coli), isoform CRA_a [Homo sapiens] Length = 807 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 459 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 498 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 499 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 557 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 558 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 617 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 618 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 672 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 673 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 730 Query: 264 MQF 266 M+ Sbjct: 731 MKV 733 >gi|313113896|ref|ZP_07799455.1| putative ribonuclease Z [Faecalibacterium cf. prausnitzii KLE1255] gi|310623775|gb|EFQ07171.1| putative ribonuclease Z [Faecalibacterium cf. prausnitzii KLE1255] Length = 312 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 89/336 (26%), Gaps = 104/336 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG A++ +P +R S + G ++ D G Sbjct: 2 LTITLLGTAATMPLP---------------DRAL--SAAFAACGGHG----LLWDCGEGT 40 Query: 65 YMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP------DC 114 R V + DA+ TH H DHI G+ GL Q RP+ + Sbjct: 41 QAAARRAGVNLMRADAICLTHYHGDHIFGLPGLLQTLGAQGRTRPLALLGPEGLPDIWAA 100 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 ++ L Y K P+ ++ E +P +H R+ S Sbjct: 101 VRALTGPLPYPVKPQVLMPGQPLALDVLSEGWPAGA---------RLVPFATKH-RVKSF 150 Query: 175 GFRFG---------------------------------------------------NVAY 183 G+R +V + Sbjct: 151 GYRLELPRAGKFSPEQARALGVPVQQWKLLQKGQSVAVEGRTVQPAQVLGAPRKGLSVVF 210 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGL-------HSSHFSLSESLKKIELINPKNAI 236 D P L+ + D LI DA H + +S K Sbjct: 211 SGDTAPCP-YYLQAAHDADLLICDATYALPEQEDQARQWGHSTFEQSASLAAQARAKRLW 269 Query: 237 LTHMHVDL----DYDMVLKSTPSRVVPAFDGMQFSS 268 LTH + +Y +S FDG + Sbjct: 270 LTHYSPMITDPEEYAAQAQSIFPAAECGFDGKSITL 305 >gi|269955859|ref|YP_003325648.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Xylanimonas cellulosilytica DSM 15894] gi|269304540|gb|ACZ30090.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Xylanimonas cellulosilytica DSM 15894] Length = 284 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 41/215 (19%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL---------RGYFLKQKR 104 V+VD G + R + ++DAV +H H DH + GL G+ Sbjct: 50 NVVVDLGSGGLGYLQRHVSLHALDAVALSHLHPDHCADLSGLYVHLKYHPELGFARTGVP 109 Query: 105 P-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 P + VY D + + +P + + + + G +E P Sbjct: 110 PHLPVYGPIDVAQRAAAMYG---------LHPGETMDQIYDFRNWYDGVTVRVGPLEITP 160 Query: 164 ILQQHGRISSLGFRFGN-----------VAYCTDVNAFPAESLEKLQNLDFLIIDAL--- 209 H + + G R +AY D + A +E Q+ D L+ +A Sbjct: 161 RAVYH-PVEAYGLRIVGPSTTRPGAAAVLAYTGDT-DYCAAVVEVAQDADVLLAEAAFVQ 218 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + H + + + + + + +LTH+ Sbjct: 219 GRDDRVEPGI-HLTGARAGRVAAEASVRRLVLTHL 252 >gi|195953297|ref|YP_002121587.1| hypothetical protein HY04AAS1_0922 [Hydrogenobaculum sp. Y04AAS1] gi|195932909|gb|ACG57609.1| conserved hypothetical protein [Hydrogenobaculum sp. Y04AAS1] Length = 258 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 86/239 (35%), Gaps = 55/239 (23%) Query: 58 VDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL----------RGYFLKQKRP 105 +D GP ++ +L +D + +H H DH I+ + L P Sbjct: 43 IDPGPGAFLNILSLGFKPWDMDIFILSHIHLDHSADINTMVESAKVGTKESNKQLAIGAP 102 Query: 106 IDV-YAAPDC-MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 D Y + + + F + +Y + ++ V I K Sbjct: 103 EDAFYGNTKVILDFILKKIDKHFIFKEKASY-------MWKDLKVDILKKHT-------- 147 Query: 164 ILQQHGRISSLGFRFGNV-AYCTDVNAFPAESLEKL-QNLDFLIIDAL--KNGLHSSHFS 219 HG I + G F ++ AY F +E +N++ LI++ + + H Sbjct: 148 ---HHGAI-TYGIVFNDIIAYHP-CAKFEPHIVEYYPKNVEVLILNTTFYRQKQNIDHLC 202 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV------------VPAFDGMQF 266 + ++ I ++ PK AI+TH D+ +++ P V + AFDG + Sbjct: 203 KDDVIEIINIVKPKMAIITHFASDM-----IEAGPENVAKEIEDKTNVKTIAAFDGAKI 256 >gi|312959562|ref|ZP_07774079.1| beta-lactamase-like protein [Pseudomonas fluorescens WH6] gi|311286279|gb|EFQ64843.1| beta-lactamase-like protein [Pseudomonas fluorescens WH6] Length = 252 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 34/165 (20%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T V+VD G ++LR V + A+L TH HADH+HG+ L ++ + Sbjct: 20 DDTYVLVDCGFSLKETERRLLRLGVHPAQLSAILVTHEHADHVHGVGLLS-----RRYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + ++ + + PI + + + G + I Sbjct: 75 PVYLSRGTLRGMRK---------------PIEPAGFLAGGE-----QLRIGALSIDVIAV 114 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 H + F + TD+ ++ + L+ +NLD L+I+ Sbjct: 115 AHDAQEPTQYVFSDGERRFGVLTDLGSYCTKVLDGYRNLDALMIE 159 >gi|308069731|ref|YP_003871336.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Paenibacillus polymyxa E681] gi|305859010|gb|ADM70798.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Paenibacillus polymyxa E681] Length = 252 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 25/209 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRP 105 +++D G + + + V IDA+L TH HADH+ G++ + L +++P Sbjct: 26 DSGEGKLLIDCGTTASLALHQMGVPLPDIDAILITHIHADHVGGLEEFGFQMNILHRRKP 85 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS------AGGVI 159 + +Y A + L+E L + + + +V + +G + Sbjct: 86 L-LYIAEPLIHPLWE------HTLKGGMSQQGMIDKLEDVFEVNVITPGVPTTLVSGIQV 138 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL---QNLDFLIIDALKNGLHSS 216 E IPI G+ S F + Y D+ F + L L + ++ + G Sbjct: 139 ELIPIRHIPGKNSYSIFINDRLFYSADMV-FDPDLLHYLVHERGCRGILHEVQLQGAGEV 197 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLD 245 H +L E L + + H+ D Sbjct: 198 HTTLDELLSLAPSLQER----IHLMHYSD 222 >gi|73955982|ref|XP_546630.2| PREDICTED: similar to elaC homolog 2 [Canis familiaris] Length = 821 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S ++++D G Sbjct: 470 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---RSLLLDCG 509 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGL-----RGYFLKQK--RPID 107 + Q+ R +D AV +H HADH G+ + R K P+ Sbjct: 510 EGTFGQLCRHYGDEVDRVLGTLAAVFVSHLHADHHTGLLNILLQRERALASLGKPCHPLL 569 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + + V + S G E Sbjct: 570 VVAPTQLKAWLQQYHNHCQQLLHHVSLIPAKCLQKGAEVSSPAVERLIASLLGACNLEEF 629 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + + G++ V Y D P E+L ++ +N LI D Sbjct: 630 QTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVQIGKNATLLIHEATLEDG 684 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N +L H Y V +P +V AFD M Sbjct: 685 LEEEAVEKTHSTTSQAIGVGVRMNAGFTMLNHFSQR--YAKVPLFSPDFNEKVGIAFDHM 742 Query: 265 QF 266 + Sbjct: 743 KV 744 >gi|149914600|ref|ZP_01903130.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] gi|149811393|gb|EDM71228.1| beta-lactamase-like protein [Roseobacter sp. AzwK-3b] Length = 556 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 62/220 (28%), Gaps = 49/220 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + +G ++VD G F Q L + ++AV TH H D Sbjct: 21 AYVYGYGPKGKERLILVDLGVTFPDMDSSPGVDLIFPDIQWLAARREQLEAVFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + + +Q VYA ++ Y +V Sbjct: 81 HVGAVAH----YYEQLGA-PVYARAFTANIARRKM-------EEFGYSEKAVRVV----- 123 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 P + G + H S G G V + D F E Sbjct: 124 SPWPEVTKVGPFTVGFVPISHSIPESSGLVIDTPKGRVVHSGDFKIDANPVVGEPFDPEL 183 Query: 195 LEKLQ--NLDFLIIDALKNGLHSSHFSLSESLKKIELINP 232 L + L+ D+ + ++H SES E I Sbjct: 184 WASLAKPGVKALMCDS--TNVFNTHAGRSES-TLAEDIQA 220 >gi|295426307|ref|ZP_06818967.1| ribonuclease Z [Lactobacillus amylolyticus DSM 11664] gi|295064046|gb|EFG54994.1| ribonuclease Z [Lactobacillus amylolyticus DSM 11664] Length = 311 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R + L + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKQRNVAGLALKLLDELNEI--WLFDIGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ GL R + P+ +Y P + + Sbjct: 43 QHQILKTNIRLRKVTKIFISHNHGDHIFGLPGLLATRSFQGDVG-PLTIYGPPGLEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP +E + + + G H R+ S G+R Sbjct: 102 TSLR---VSRTKVSYP----IKFVELTEGGLIYQ--GKDFRVYTEKLDH-RVPSFGYRI 150 >gi|193787709|dbj|BAG52912.1| unnamed protein product [Homo sapiens] Length = 807 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 459 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 498 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 499 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 557 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 558 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 617 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 618 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 672 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 673 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 730 Query: 264 MQF 266 M+ Sbjct: 731 MKV 733 >gi|296129172|ref|YP_003636422.1| hypothetical protein Cfla_1324 [Cellulomonas flavigena DSM 20109] gi|296020987|gb|ADG74223.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 262 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 71/228 (31%), Gaps = 46/228 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGY 98 SS + G + ++D G + R ++D V +H HADH+ L Sbjct: 20 SSYLVQAEDADGRTWSALLDLGNGALGALQRWGDPAALDVVALSHLHADHVA---DLAVL 76 Query: 99 -FLKQKRP------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 ++ RP + V+ ++ L + + +V Sbjct: 77 GVYRRYRPAGALPSLPVHGPDGTVERLT----HLSGKDPATDTAGQFDVRAWRAGEV--- 129 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGN-----------VAYCTDVNAFPAESLEKLQN 200 G + + +H + + G R +AY D +A P + + Sbjct: 130 --VQVGPLTLEAVPVEH-PVPAFGIRVTGPSQGDPARRVTLAYSGDTDACPGLD-DLATD 185 Query: 201 LDFLII---------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D L+ DA++ H + + + + +LTH Sbjct: 186 ADLLLAEAAFVEGRDDAVR----GVHLTGRRAGEAATRGGSRALVLTH 229 >gi|156743739|ref|YP_001433868.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235067|gb|ABU59850.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 269 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 68/222 (30%), Gaps = 53/222 (23%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + ++VD G + R + + A+L TH H DH+ L L ++ Sbjct: 20 RTGDAALLVDCGLPLRTIEPALTRIGIHPAQLSAILLTHEHGDHV-----LSAGALARRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + A + + + + + ++ + Sbjct: 75 GVPIIANQPTLAAIEQ------------------DLAGVPFQELATGAATMIADFGVRSF 116 Query: 165 LQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +G+ +C TD+ + +E L D ++I+A L + Sbjct: 117 PVPHDAAEPVGYTISAGGWCVGIATDLGHWNDTIVEGLTPADLVVIEANHDQEKLWRAPY 176 Query: 215 ----------SS-HFSLSESLKKIELINP----KNAILTHMH 241 + H + + + + ++A L H+ Sbjct: 177 VEVVKHRIYGPTGHLDNIAAGRLLARLGADGRRRSAWLAHLS 218 >gi|300812694|ref|ZP_07093103.1| ribonuclease Z [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496321|gb|EFK31434.1| ribonuclease Z [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 309 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG C P R SSL + + E + D G Sbjct: 1 MELEFLGT---------------C-SGQPSKLRNVSSLALKLLDELNEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + + +E + + E H RI S GFR Sbjct: 102 TSLR---ISKAKISYP--IKFVTLEEGGKIVSERG----FEVYTEKLDH-RIDSWGFRV 150 >gi|167759495|ref|ZP_02431622.1| hypothetical protein CLOSCI_01843 [Clostridium scindens ATCC 35704] gi|167663052|gb|EDS07182.1| hypothetical protein CLOSCI_01843 [Clostridium scindens ATCC 35704] Length = 256 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 28/183 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGY------FLKQKR 104 N V++D G Q+ + +DAV+ TH H DH + L+ F K+K+ Sbjct: 42 ENVRVLLDCGCGVISQIQNYILLEELDAVVITHYHPDHCSDLGCLQYASMILMQFGKRKK 101 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ V+ + E Y + +Y + V + D+ + I + I Sbjct: 102 PLAVWGPGE-----NERLSYE-EYCTGNSY---LEEDVFQIGDLVFASQKNVHDILSYAI 152 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSL 220 + + SSL + G+ Y D++ F + + + + G H Sbjct: 153 RVEDRKGSSLVY-SGDTGYYEDLSKFAE-------GTELFLCECSLYNWQKGKTPGHMCA 204 Query: 221 SES 223 E+ Sbjct: 205 EET 207 >gi|329768164|ref|ZP_08259669.1| hypothetical protein HMPREF0428_01366 [Gemella haemolysans M341] gi|328838075|gb|EGF87694.1| hypothetical protein HMPREF0428_01366 [Gemella haemolysans M341] Length = 271 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 57/231 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ I +N +VD G + Q+ R + I+A+ TH H DHI G+ Sbjct: 14 SIYIEH-----NNFKCLVDAGLTGKKVVENLAQIER-DIKDINAIFVTHEHIDHIKGVG- 66 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L +K I VYA +++ + C + D + Sbjct: 67 ----VLARKYNIPVYANKLTWQNMTK----CGEISSDLKF------------HFEKEESK 106 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI----- 205 + H I+ + F V+ TD + ++ +++ ++ Sbjct: 107 IFDDVVVNSFGVSHDAINPQFYTFECEGKRVSILTDTGYVSDKMIDYVKDSHTIVYESNH 166 Query: 206 -IDALKNGLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH 241 + L +G + H S ++S + I + KN L H+ Sbjct: 167 EENVLLSGPYPWTTKQRILSDMGHLSNTDSANYLTKIVGDSTKNVFLAHLS 217 >gi|319792856|ref|YP_004154496.1| beta-lactamase domain protein [Variovorax paradoxus EPS] gi|315595319|gb|ADU36385.1| beta-lactamase domain protein [Variovorax paradoxus EPS] Length = 258 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 33/175 (18%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLR 96 + + G + ++VD G ++ + + IDA+ TH H DHI Sbjct: 16 ALVE-ATSGGRTSRLLVDCGFGIRQLDQRLAQAGLVAGDIDAIFITHEHGDHIG-----C 69 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + L ++ I V+ + A R + +N + + A Sbjct: 70 AHTLSRRNRIPVWMSEGTW-----------LATGGRDFEGRLNLARDDA-------EFAV 111 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 G I P H L R + + TD+ A L +L + L+++ Sbjct: 112 GDIGVQPFTVPHDAREPLQLRCTDGARSLGVLTDLGHATAHVLNRLAGVHALLLE 166 >gi|224368802|ref|YP_002602963.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] gi|223691518|gb|ACN14801.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium autotrophicum HRM2] Length = 549 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 26/159 (16%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +T V++D G F + LRE + AV+ TH H DHI I Sbjct: 23 GDTIVVIDAGLMFPEDYMLGVDIVIPEMEYLRENRDRLKAVVLTHAHEDHIGAI-----A 77 Query: 99 FLKQKRPIDVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +L ++ P+ VY P + + F + P+ + + I + + Sbjct: 78 YLLKEFPVSVYGTPFTLSVVKNKLREFD-ILNMAELNVVMPLDRIKIGAFDIEFIRVSHS 136 Query: 156 GGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAF 190 + + I G I G FR +++ CTD++ F Sbjct: 137 TVDVVGLAIRTPVGMIVHTGDFRINHCFDMSNCTDISRF 175 >gi|297199587|ref|ZP_06916984.1| ribonuclease Z [Streptomyces sviceus ATCC 29083] gi|197713484|gb|EDY57518.1| ribonuclease Z [Streptomyces sviceus ATCC 29083] Length = 301 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 84/323 (26%), Gaps = 79/323 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCM 115 G Q+LR V ++ + TH H DH G+ G+ + P Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGV--IQRINLDRVPHEVTAHYPKSG 96 Query: 116 KHLFESFRYCFKALDDR----------TYPPIVNPIVIENNDVPICMKSAGGVIE----- 160 + F+ RY + +E + ++S G + Sbjct: 97 QRFFDRLRYATAYRETVRLTEAPVAADGVLARTGGYTLEARRLSHPVESYGYRLTEPDGR 156 Query: 161 -AIPILQ--------QHGRISSLGFRFG-------------NVAYCTDVNAFPAESLEKL 198 +P GRI G G A+ D Sbjct: 157 RMLPDRLAAHGIKGPDVGRIQREGSLNGVQLDEVSEVRHGQRFAFVMDT-RLCDGVHALA 215 Query: 199 QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV------DLDY 246 D L+I++ + + H + ++ ++ +LTH + + Sbjct: 216 DGCDLLVIESTFLDEDEQLAVEHGHLTAGQAATVARDAGVRHLVLTHFSQRYSEPEEFER 275 Query: 247 DMVLKSTPSRVVPAFDGMQFSSP 269 + A D ++ P Sbjct: 276 QARAAGYEGELTVAHDLLRVPVP 298 >gi|110800263|ref|YP_696343.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|110674910|gb|ABG83897.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] Length = 284 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDVFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++G + L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYGNLNNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|229512735|ref|ZP_04402203.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TMA 21] gi|229350245|gb|EEO15197.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TMA 21] Length = 446 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 +NRR +S+ S R +++D G D + + +DA+ Sbjct: 2 AQNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDAL 61 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L KQ +Y + Sbjct: 62 ILTHAHIDHIGRLPWLLAAGFKQ----PIYCTAATAE 94 >gi|168046126|ref|XP_001775526.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673196|gb|EDQ59723.1| predicted protein [Physcomitrella patens subsp. patens] Length = 582 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F Q + I+AV+ TH H DHI + + Sbjct: 52 DRYIMIDAGLMFPDYDDLGIQKVLPDTQFIHRWRDKIEAVIITHGHEDHIGAL----PWV 107 Query: 100 LKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + P +YA M+ + L + P + G Sbjct: 108 IPALDPKTPIYATGFTMQLIKRR-------LKEYNIPAEGRLRTFSMRA-----RFDAGP 155 Query: 159 IEAIPILQQHGRISSLG 175 E PI H G Sbjct: 156 FEIEPIRVTHSIPDCCG 172 >gi|300858684|ref|YP_003783667.1| hypothetical protein cpfrc_01267 [Corynebacterium pseudotuberculosis FRC41] gi|300686138|gb|ADK29060.1| hypothetical protein cpfrc_01267 [Corynebacterium pseudotuberculosis FRC41] gi|302206393|gb|ADL10735.1| Ribonuclease J [Corynebacterium pseudotuberculosis C231] gi|302330949|gb|ADL21143.1| Ribonuclease J [Corynebacterium pseudotuberculosis 1002] gi|308276636|gb|ADO26535.1| Ribonuclease J [Corynebacterium pseudotuberculosis I19] Length = 683 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 49/145 (33%), Gaps = 25/145 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ ++A++ TH H DHI I + Sbjct: 149 CGVLFPSSGEPGVDL-ILPDFGP------IEDKLDKVEALVVTHGHEDHIGAI----PWL 197 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + + +YA+ + + K + R P ++ +V G Sbjct: 198 LKLRPDLPIYASKFTLALIAA------KCREHRQRPKLI--------EVNEKSDINRGPF 243 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC 184 H LG A Sbjct: 244 NIRFWAVNHSIPDCLGLAIKTGAGL 268 >gi|289432316|ref|YP_003462189.1| metallo-beta-lactamase family protein [Dehalococcoides sp. GT] gi|288946036|gb|ADC73733.1| metallo-beta-lactamase family protein [Dehalococcoides sp. GT] Length = 258 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 19/176 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 TR S + V++D G L E + S+ AV+ +H H DHI + L Sbjct: 16 TRPSCLMLSGG-------VVLDAGAITGSLTLDE-LYSLKAVILSHAHYDHIKDVPLLAM 67 Query: 98 YFLKQKRPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + +D+Y + + + + F F D T PP + + G Sbjct: 68 NLAYGLKNVDIYGSQAVEEVVTKPPFSGGF-YPDFFTRPPSAPALRFNKITPGLEFDCQG 126 Query: 157 GVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIID 207 I +P+ H R + GF + Y +D + E++ N + LII+ Sbjct: 127 YRI--LPVSVPHSR-DTTGFWVKDLNGHSFFYTSDTGSGLGAVWEQV-NPELLIIE 178 >gi|197116810|ref|YP_002137237.1| ribonuclease Z [Geobacter bemidjiensis Bem] gi|197086170|gb|ACH37441.1| ribonuclease Z [Geobacter bemidjiensis Bem] Length = 360 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R + ++ D G + + SIDA+ +H H DH G+D + + R IDV+ Sbjct: 27 RPTGRALLFDCGK--MHHLAKRVYTSIDAIFISHAHMDHFMGMDSVVRHSHASPRTIDVF 84 Query: 110 AAPDCMKHLFESFR 123 P + F Sbjct: 85 GPPGLAARMGHKFS 98 >gi|163741471|ref|ZP_02148862.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] gi|161385205|gb|EDQ09583.1| metallo-beta-lactamase family protein [Phaeobacter gallaeciensis 2.10] Length = 555 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPH 85 + + G ++VD G PD L+E+ ++ V TH H Sbjct: 21 AYVYGYGKPGKERLILVDLGVTFPDMDSSPGVDLIMPDIRW--LKERADQLEGVFITHAH 78 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD----RTYPPI--VN 139 DHI + L + + +YA ++ +P + + Sbjct: 79 EDHIGAVAHL-----YRDLNVPIYARAFTANLARRKMDEAGLDSEEVKTVSAWPEVTKLG 133 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF-----PAES 194 P + + + +GG++ P GRI G + TD E Sbjct: 134 PFTVGVAPISHSIPESGGLVIDTPA----GRIVHTGD------FKTDPTPIVGEAFDPEM 183 Query: 195 LEKL--QNLDFLIID 207 ++ + L+ D Sbjct: 184 WAEIAKDGVKALVCD 198 >gi|73748267|ref|YP_307506.1| hypothetical protein cbdb_A377 [Dehalococcoides sp. CBDB1] gi|147669047|ref|YP_001213865.1| hypothetical protein DehaBAV1_0402 [Dehalococcoides sp. BAV1] gi|73659983|emb|CAI82590.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1] gi|146269995|gb|ABQ16987.1| hypothetical protein DehaBAV1_0402 [Dehalococcoides sp. BAV1] Length = 258 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 19/176 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 TR S + V++D G L E + S+ AV+ +H H DHI + L Sbjct: 16 TRPSCLMLSGG-------VVLDAGAITGSLTLDE-LYSLKAVILSHAHYDHIKDVPLLAM 67 Query: 98 YFLKQKRPIDVYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + +D+Y + + + + F F D T PP + + G Sbjct: 68 NLAYGLKSVDIYGSQAVEEVVTKPPFSGGF-YPDFFTRPPSAPALRFNKITPGLEFDCQG 126 Query: 157 GVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIID 207 I +P+ H R + GF + Y +D + E++ N + LII+ Sbjct: 127 YRI--LPVSVPHSR-DTTGFWVKDLNGHSFFYTSDTGSGLGAVWEQV-NPELLIIE 178 >gi|16332017|ref|NP_442745.1| hypothetical protein sll0514 [Synechocystis sp. PCC 6803] gi|2496795|sp|Q55470|Y514_SYNY3 RecName: Full=Uncharacterized protein sll0514 gi|1001329|dbj|BAA10816.1| sll0514 [Synechocystis sp. PCC 6803] Length = 554 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 32/177 (18%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPD 113 +++D G + +L ++D V +H H DH G+ + Q+ P I + A+ Sbjct: 39 RILLDCGLEDLTPLLAADPGTVDLVFCSHAHRDHGLGL-----WQFHQQFPHIPILASEV 93 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L ++ F R P V+ G +E +P G Sbjct: 94 TQRLLPLNWPDEFVPPFCRVLPWRSPQEVL-----------PGLTVELLPAGHLPGAALI 142 Query: 174 L-----GFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIID---ALKNGLHS 215 L G R V Y D +L L+ L D LI++ + H Sbjct: 143 LLEYHNGDRLYRVIYTGDYCLSHLQLVDGLALTPLRGLKPDVLILEGHYGNRRLPHR 199 >gi|20094663|ref|NP_614510.1| metal-dependent RNase [Methanopyrus kandleri AV19] gi|19887824|gb|AAM02440.1| Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Methanopyrus kandleri AV19] Length = 652 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 65/204 (31%), Gaps = 50/204 (24%) Query: 39 RSSLKISRVSERGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYT 82 RSSL + + V++D G P+F M +DA++ T Sbjct: 207 RSSLFLHT-----EESRVLLDCGVNVAANGTDAYPHFNVPEFRM-------DDLDAIVIT 254 Query: 83 HPHADHIHGIDGLRGYFLKQK---RPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIV 138 H H DH YF + K + VY P ++ Y PP Sbjct: 255 HAHLDHCG----FLPYFYRHKVIESRVPVYCTPPTRDLMYLLLTDYIKVLEKRGQEPPYT 310 Query: 139 NPIVIENNDVPICMK-------SAGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVN 188 V + I + + I G S F N Y D+N Sbjct: 311 EKDVKKVIKRTITIDYREPTDITPDMSITFYNAGHILGSASVHVFLQDKGHNFVYTGDIN 370 Query: 189 AFPAESLE----KLQNLDFLIIDA 208 P+ LE + + +D ++++A Sbjct: 371 PTPSRLLEGADNRFKRVDSMVVEA 394 >gi|291334134|gb|ADD93805.1| ribonuclease Z [uncultured marine bacterium MedDCM-OCT-S05-C259] Length = 290 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 29/185 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDG---LRGYFLKQKR 104 N IVD G + R + ++ AVL TH H+DHI + L +++ Sbjct: 3 EAGNDLYIVDVGDGSVANIQRWGINLSNLKAVLITHLHSDHIADLPDLNLLSWVNRSREQ 62 Query: 105 PIDVYAAP---DCMKHLFESF--RYCFK-ALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++ +K +++ + F+ P+ ++ N + + Sbjct: 63 NLTIFGPKGIGTTIKGFNQAYFLDHKFRNEHHGDEQAPLGVDEMVANTIEEEGVILSDNG 122 Query: 159 IEAIPILQQHGRIS-SLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + L +H ++ + G+RF G+ AY T + +++D L + Sbjct: 123 LTITAFLVEHDPVTHAYGYRFDYKGRSIVISGDTAYST-------NLINYAKDVDLLFHE 175 Query: 208 ALKNG 212 A+ Sbjct: 176 AISYE 180 >gi|124027542|ref|YP_001012862.1| metal-dependent hydrolase of beta lactamase, ElaC [Hyperthermus butylicus DSM 5456] gi|123978236|gb|ABM80517.1| Metal-dependent hydrolase of beta lactamase, ElaC [Hyperthermus butylicus DSM 5456] Length = 302 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 61/177 (34%), Gaps = 39/177 (22%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGPDF 64 LG S VP R R S+ + + V++D G Sbjct: 5 IVFLGT--SAAVP----------------TRYRGLPSIAVVHRG-----SIVLLDAGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFE 120 + R + ++A+ TH H DH G+ GL L +K P+ V L E Sbjct: 42 QAALTRAGLSPLRVEAIFITHLHGDHFFGLPGLLQSMGMLGRKTPLLVAGPRGLYGFLRE 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 +FR + P V E + +G +E+ P+ I ++G+R Sbjct: 102 AFR-------ASRWLPGFPLYVAELEPGEKLVLPSGLEVESFPVSH---TIPAMGYR 148 >gi|261337682|ref|ZP_05965566.1| metallo-beta-lactamase family protein [Bifidobacterium gallicum DSM 20093] gi|270277121|gb|EFA22975.1| metallo-beta-lactamase family protein [Bifidobacterium gallicum DSM 20093] Length = 644 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 77/245 (31%), Gaps = 80/245 (32%) Query: 14 ASLGVPRITGDWGACDPTNPKNRR--------TRSSLKISRVSERGSNTT---------- 55 + VP I ++P++ R + S++I + G Sbjct: 60 TAQSVPTIA-------ASDPRDHRELITPPKYRKGSMRIVPLGGLGEIGRNMNVIEYNGH 112 Query: 56 -VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++D G PDF +++++ +DA++ TH H DHI G+ Y Sbjct: 113 ILLIDCGVLFPEEEQPGVDLILPDF--NYIKDRLDQVDALVLTHGHEDHIGGV----PYL 166 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN--NDVPICMKSAGG 157 LK ++ I + + + + IE ++V K G Sbjct: 167 LKLRKDIPLIGSKLTLAFVEAK----------------CKEHRIEPIMHEVTGRDKMKVG 210 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLE------------KL--QNLD 202 + H +L A D + L KL Q +D Sbjct: 211 PFNMEFVNVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEQGVD 270 Query: 203 FLIID 207 L++D Sbjct: 271 LLMMD 275 >gi|124265259|ref|YP_001019263.1| cAMP phosphodiesterase [Methylibium petroleiphilum PM1] gi|124258034|gb|ABM93028.1| cAMP phosphodiesterases, class-II, metallo-beta-lactamase superfamily [Methylibium petroleiphilum PM1] Length = 267 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 22/173 (12%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ------KRPI 106 + V++D G L + +D +L +H H DH+ I L +K + PI Sbjct: 29 DDNVLIDAGTGVGDLALDA-MARVDDILVSHSHLDHVLAIPLLADSVMKLRLAQPERGPI 87 Query: 107 DVYAAPDCMKHLF-ESFRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 V+ P+ + L F F ++ YP I + + A +E Sbjct: 88 RVHGLPETLAALRAHLFNGQLWPDFTSIPSAAYPIIRLLPFAIGDTLRFGRGDAERHVEV 147 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN--LDFLIIDA 208 +P + + GF G Y D + PA L+ + LII+ Sbjct: 148 LPASH---TVPACGFAVDSEEGWWVYSGDTGSNPAL-WAALKGRRIAHLIIET 196 >gi|303231362|ref|ZP_07318096.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302513958|gb|EFL55966.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 269 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 53/218 (24%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMSQVEGIFISHEHTDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPIL 165 VY + + V IV ++ V + G + P Sbjct: 81 PVYTKQGTWREIQ------------------VKLIVPKHQLVELTKGSLELGNLTVEPFS 122 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH- 214 H +G TD + L +L L+++A L+ G + Sbjct: 123 VSHDAADPIGINVFSGKDKATVVTDTGVITDDILHRLDGSTLLVLEANYDPQMLRFGPYQ 182 Query: 215 ----------SSHFS---LSESLKKIELINPKNAILTH 239 H S +++L ++ + IL H Sbjct: 183 PFLKQRVASDEGHLSNEMAAQALLMMKRPDFMQVILAH 220 >gi|10437225|dbj|BAB15021.1| unnamed protein product [Homo sapiens] gi|62898746|dbj|BAD97227.1| elaC homolog 1 variant [Homo sapiens] Length = 363 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 29/127 (22%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S++ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASAVVLRCEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q+++ Q+ I + TH H DH G+ L+ + K+PI++Y Sbjct: 41 TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLR 100 Query: 116 KHLFESF 122 ++ + Sbjct: 101 DFIWRTM 107 >gi|163796477|ref|ZP_02190437.1| hypothetical protein BAL199_10957 [alpha proteobacterium BAL199] gi|159178327|gb|EDP62871.1| hypothetical protein BAL199_10957 [alpha proteobacterium BAL199] Length = 277 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 71/257 (27%), Gaps = 50/257 (19%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGI------DGLRG 97 V R VI D G + L + V TH H DHI G+ R Sbjct: 33 CVEVRCGPHLVIFDGGTGIRELGKALTAEAPVEADVFLTHFHLDHIAGLPFFATAYDARN 92 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +D +K + + P P+ DV S G Sbjct: 93 RVHFHAARLD---TALTLKTIVARM---------MSPPLFPVPVDEYRADVDFVDFSVGD 140 Query: 158 VIEAIPILQQHGRISSL-----GFRFGN----VAYCTDVNA-----FPAESLEKLQNLDF 203 +E P L R G+R +AY TD + + D Sbjct: 141 RLEPHPGLVLETRALCHPGGACGYRLSWAGRTIAYVTDTEHPRDGSLDPNVQDLMAGADV 200 Query: 204 LIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDM--------V 249 I DA + H + E ++ + +L H D +D Sbjct: 201 AIYDATFTDAEYACYQGWGHSTWREGVRAADAAGVGTLVL--FHHDPAHDDDAMDRIAAD 258 Query: 250 LKSTPSRVVPAFDGMQF 266 ++ + A DGM Sbjct: 259 AEAARPGTLVAQDGMTL 275 >gi|222823064|ref|YP_002574637.1| metallo-beta-lactamase family protein [Campylobacter lari RM2100] gi|222538285|gb|ACM63386.1| metallo-beta-lactamase family protein [Campylobacter lari RM2100] Length = 652 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 25/159 (15%) Query: 52 SNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N +IVD G F + R+ I A++ TH H DHI + Y Sbjct: 125 NNDAIIVDIGMSFPDGSMHGVDIIIPDFDYVRKIKNKIRAIIITHAHEDHIGAV----PY 180 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 F K+ + +YA P + + F + + + PI + E D I + + Sbjct: 181 FFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKWFRPITKRQIYEIGDFNLEWIHITHS 239 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 A+ I + G I G F+ Y TD+N Sbjct: 240 IIDACALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLNRL 278 >gi|153826736|ref|ZP_01979403.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739451|gb|EDM53689.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 460 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 +NRR +S+ S R +++D G D + + +DA+ Sbjct: 16 AQNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALAHVDAL 75 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L KQ +Y + Sbjct: 76 ILTHAHIDHIGRLPWLLAAGFKQ----PIYCTAATAE 108 >gi|257894283|ref|ZP_05673936.1| beta-lactamase [Enterococcus faecium 1,231,408] gi|257830662|gb|EEV57269.1| beta-lactamase [Enterococcus faecium 1,231,408] Length = 238 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 70/208 (33%), Gaps = 44/208 (21%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +D +L TH H DHIHG+ L +K +DV+A + + Sbjct: 23 DQLDGILVTHEHRDHIHGVG-----VLARKYHLDVFANQQTWEAME-------------- 63 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNA 189 P I N V + + + G I+ H + +RF TD Sbjct: 64 -PLIGNVPVEQKHLFEMGKVRTFGDIDIESFGVSHDAAAPQFYRFHKENRSFVMLTDTGY 122 Query: 190 FPAESLEKLQNLD-FLI-----IDALKNGLHS-----------SHFSLSE-SLKKIELIN 231 ++N D +L+ ++ L+ G + H S + +L ++I Sbjct: 123 CSDYMRGVIENADGYLMESNHDLEMLRMGPYPWNLKQRILGDRGHLSNEDGALVMTDVIG 182 Query: 232 --PKNAILTHMHVDLDYDMVLKSTPSRV 257 K L H+ + + + T V Sbjct: 183 NRTKRIYLGHLSKENNMKELAHLTMENV 210 >gi|229100066|ref|ZP_04230975.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] gi|229106461|ref|ZP_04236820.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228676992|gb|EEL31479.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228683355|gb|EEL37324.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] Length = 556 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN VI+D G F + L E + A++ TH H DHI GI + Sbjct: 29 SNDIVIIDCGNKFPDESLLGIDLIIPDIAYLVENKDKVRALIVTHGHEDHIGGI----PF 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLK K + VYA + + L + I I +N G Sbjct: 85 FLK-KLNVPVYATRFTLGLIE-------IKLKEHKLLGESELIEINSNS-----NLTIGG 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F GN+ + D Sbjct: 132 ISVSFFKVTHSIPDCLGIVFHTPEGNIVHTGDFK 165 >gi|322434543|ref|YP_004216755.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] gi|321162270|gb|ADW67975.1| metallo-beta-lactamase family protein [Acidobacterium sp. MP5ACTX9] Length = 346 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Query: 52 SNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T V+VD G + R E +DA+L TH H DH+ G+ L ++ I Sbjct: 20 ERTRVLVDAGLSCRELLRRMAVVGEDPEKLDAILITHEHLDHVAGL-----AVLARRLKI 74 Query: 107 DVYAAPDCMKH 117 V+ + Sbjct: 75 PVFFTEQTHRA 85 Score = 39.0 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 12/75 (16%) Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLII 206 + + G +E P H GF F +A TD+ P L+N+D L++ Sbjct: 190 QFSIGDLEICPFTIPHDASDPCGFVFESLGDGVRMALATDLGYMPPNVKAALKNVDVLLL 249 Query: 207 DA------LKNGLHS 215 ++ LK+G + Sbjct: 250 ESNHDLEMLKDGPYP 264 >gi|326790902|ref|YP_004308723.1| beta-lactamase [Clostridium lentocellum DSM 5427] gi|326541666|gb|ADZ83525.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427] Length = 266 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 29/161 (18%) Query: 50 RGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++D G Q+ SI+ +L TH H+DHI G+ L +K Sbjct: 20 EAGEQRFLIDVGISGKKVVAALDQLEVAP-ESINGILITHEHSDHIKGVG-----ILSRK 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +YA + L I + + G ++ +P Sbjct: 74 YNIPIYATSLAWERLLGE-------------KMIGVVKEEHQKILEKEVYLQVGELKILP 120 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQN 200 H + +G+ F + TD+ + +L Sbjct: 121 YPIYHDAVDPVGYIFEYKDKKITVATDIGTIDDKIAARLSG 161 >gi|14600857|ref|NP_147381.1| putative metal dependent hydrolase [Aeropyrum pernix K1] gi|5104292|dbj|BAA79607.1| putative metal dependent hydrolase [Aeropyrum pernix K1] Length = 250 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 32/180 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD--T 60 LG GA++ NP RR +SSL + + TV+VD Sbjct: 2 SCAELYFLGTGAAV---------------NP--RRMQSSLLLDYMG-----VTVLVDASC 39 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRPIDVYAAPDCMKHLF 119 G ++ L SI AV+ TH H DH+ G+ L + P+ +++ P + Sbjct: 40 GAANALEALGYPPESIGAVVVTHGHYDHVCGLGLLSFIKSFRGGPPLKLHSPPAAEGVVR 99 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +A + V ++ P GGV+ + H + +L G Sbjct: 100 S----VVEAGLRSSARGGVGYSILPLR--PGGEAGFGGVVRVRGLRADH-TVEALSLEIG 152 >gi|255540285|ref|XP_002511207.1| conserved hypothetical protein [Ricinus communis] gi|223550322|gb|EEF51809.1| conserved hypothetical protein [Ricinus communis] Length = 880 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F ++ I+AV+ TH H DHI + + Sbjct: 101 DRYILIDAGVMFPDYDELGVQKIIPDTTFIKRWSHKIEAVIITHGHEDHIGAL----PWV 156 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + +YA+ M+ + + + L R K G Sbjct: 157 IPALDSRTPIYASSFTMELIKKRLKEHGIFLPSRL------------KVFRTRKKFIAGP 204 Query: 159 IEAIPILQQHGRISSLG 175 E PI H G Sbjct: 205 FEVEPIRVTHSIPDCCG 221 >gi|195449222|ref|XP_002071979.1| GK22564 [Drosophila willistoni] gi|194168064|gb|EDW82965.1| GK22564 [Drosophila willistoni] Length = 757 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIRDLKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N LE+LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELERLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|256787830|ref|ZP_05526261.1| ribonuclease Z [Streptomyces lividans TK24] gi|289771717|ref|ZP_06531095.1| ribonuclease Z [Streptomyces lividans TK24] gi|289701916|gb|EFD69345.1| ribonuclease Z [Streptomyces lividans TK24] Length = 301 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 82/289 (28%), Gaps = 73/289 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCM 115 G Q+LR V ++ + TH H DH G+ G+ + P Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGV--IQRINLDRVPHEITAHYPRSG 96 Query: 116 KHLFESFRYCFKALDDRT---------YPPIVNP-IVIENNDVPICMKSAGGVIE----- 160 + FE RY + P V P ++ + ++S G + Sbjct: 97 QRFFERLRYATAYRETVALTEVPVAADGPLAVTPAYTLDARRLSHPVESYGYRLTEPDGR 156 Query: 161 -AIPILQ-QHG----------RISSLGF----------RFGNVAYCTDVNAFPAESLEKL 198 +P HG R SLG R A+ D Sbjct: 157 RMLPERLAAHGITGPDVGRIQRDGSLGGVALDEVSEVRRGQRFAFVMDT-RLCEGVHALA 215 Query: 199 QNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 + D L+I++ + H + ++ + ++ +LTH Sbjct: 216 EGSDLLVIESTFLDEDETLATDHGHLTAGQAARVARDAGVRHLVLTHFS 264 >gi|253701241|ref|YP_003022430.1| beta-lactamase [Geobacter sp. M21] gi|251776091|gb|ACT18672.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 252 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 65/194 (33%), Gaps = 20/194 (10%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDR 132 I+ +L TH H DHI GI L + P + V+ + + L + D Sbjct: 45 RIEDILVTHSHLDHIRGIPLLADNIVVSGLPRTVRVHGTTEVLAAL-STHLMNGVIWPDF 103 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 T P V+ +P+ G E + H + ++G+R + Y D Sbjct: 104 TRIPTPESPVLRYQPIPVERSFQVGDYEVLACPVNH-PVPAVGYRVSRGGTSLLYTGDT- 161 Query: 189 AFPAESLEKLQNLDFLIIDALKN---------GLHSSHFSLSESLKKIELINPKNAILTH 239 E L LI++ H + L L K+ + P ++TH Sbjct: 162 GPTERIWELAGELAALIVEVSFPCDMEEIALLTGHLTPVLLGNELAKLPKL-PPRILITH 220 Query: 240 MHVDLDYDMVLKST 253 + YD + Sbjct: 221 LKPQY-YDRIEAEL 233 >gi|304437038|ref|ZP_07397001.1| beta-lactamase domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369989|gb|EFM23651.1| beta-lactamase domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 304 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 + I + T VD ++ + V +DAV+ THPHADHI G+ Sbjct: 54 ILIQTAEQNVLIDTGDVDERDKLRAELDKAGVKKLDAVILTHPHADHIGGM 104 >gi|296117693|ref|ZP_06836277.1| ribonuclease J [Corynebacterium ammoniagenes DSM 20306] gi|295969424|gb|EFG82665.1| ribonuclease J [Corynebacterium ammoniagenes DSM 20306] Length = 584 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + ++ I+A++ TH H DHI I + Sbjct: 50 CGVLFPSSGEPGVDL-ILPDFGP------IENKIDKIEALIVTHAHEDHIGAI----PWL 98 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P + +V + G Sbjct: 99 LKLRSDIPIVASRFTIALIAA------KCKEHRQRPKFI--------EVNEKSDVSYGPF 144 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 A H +LG GNV + D+ PA S + +D + Sbjct: 145 RARFWAVNHSVPDALGVMLGTPAGNVIHTGDIKLDQTPLDGRPTDLPALSRYGDEGVDLM 204 Query: 205 IID 207 + D Sbjct: 205 LCD 207 >gi|121727067|ref|ZP_01680258.1| conserved hypothetical protein [Vibrio cholerae V52] gi|121630578|gb|EAX62968.1| conserved hypothetical protein [Vibrio cholerae V52] Length = 459 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 17/95 (17%) Query: 35 NRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLY 81 NRR +S+ S R +++D G D + + +DA++ Sbjct: 17 NRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALIL 76 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 TH H DHI + L KQ +Y + Sbjct: 77 THAHIDHIGRLPWLLAAGFKQ----PIYCTAATAE 107 >gi|268533164|ref|XP_002631710.1| Hypothetical protein CBG20910 [Caenorhabditis briggsae] Length = 280 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 52 SNTTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++DTG VL I ++ TH H DH+ GID +R L K+ Sbjct: 41 GSDKILIDTGEPNISGYISALKSVLSSTNSQIAYIVITHWHGDHVGGIDNIREEILNHKK 100 Query: 105 PIDVYAAPDCMKHLFESFRYC 125 I +Y E F Y Sbjct: 101 -IPIYKMQRDKDEGVERFTYV 120 >gi|255349133|ref|ZP_05381140.1| Zn-dependent hydrolase [Chlamydia trachomatis 70] gi|255503670|ref|ZP_05382060.1| Zn-dependent hydrolase [Chlamydia trachomatis 70s] gi|255507349|ref|ZP_05382988.1| Zn-dependent hydrolase [Chlamydia trachomatis D(s)2923] gi|289525782|emb|CBJ15263.1| Zn-dependent hydrolase [Chlamydia trachomatis Sweden2] gi|296435357|gb|ADH17535.1| Zn-dependent hydrolase [Chlamydia trachomatis E/150] gi|296439074|gb|ADH21227.1| Zn-dependent hydrolase [Chlamydia trachomatis E/11023] Length = 262 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 58/236 (24%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G Q + E + S I + TH H+DHI G+ R + + Sbjct: 25 LLIDLG--ISKQAVTEALHSMGIHPEDIQGIFVTHEHSDHIAGL---RSFIKTY--RTPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L + C + + + H Sbjct: 78 ICNIETARSLRQLLDLC-----------------PTFKIFTTGYRFSLEDLRVQTFNVPH 120 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS- 216 + +GF F + +CTD+ + L + D+L+I++ L++ S Sbjct: 121 DAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCDCDYLLIESNHDPEMVLRSSRPESC 180 Query: 217 ---------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 H S +E ++ + K L H+ L+ + ++ + V PA Sbjct: 181 KQRILSKQGHISNAECGALLQRVLTPRIKKIYLAHLS--LECNTAEQAL-NTVTPA 233 >gi|194016214|ref|ZP_03054828.1| metallo-beta-lactamase family protein [Bacillus pumilus ATCC 7061] gi|194011687|gb|EDW21255.1| metallo-beta-lactamase family protein [Bacillus pumilus ATCC 7061] Length = 264 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +VD G V + + +D + TH H+DHI G+ + +K + Sbjct: 22 DEHAFLVDAGLSGKQMVELLGQIDRKPEDLDGIFVTHEHSDHIKGLG-----VMARKYKL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA K + I + + + + G ++ Sbjct: 77 PVYANAKTWKAMET---------------HIGKVDIEQKFHFDMETVQSFGGLDVESFGV 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H + + F +A TD +Q+ + + + L+ G + Sbjct: 122 SHDAAEPMFYVFHYGGRKLALMTDTGYVSDRMKGIIQSANTFVFESNHDVGMLQMGRYPW 181 Query: 216 ----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I L H+ D Sbjct: 182 SIKRRILSDVGHVSNEDAALAMTDVIGDATSRIYLAHLSQD 222 >gi|193787655|dbj|BAG52861.1| unnamed protein product [Homo sapiens] Length = 586 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 238 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 277 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 278 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 336 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 337 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 396 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 397 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 451 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 452 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 509 Query: 264 MQF 266 M+ Sbjct: 510 MKV 512 >gi|184158791|ref|YP_001847130.1| beta-lactamase superfamily hydrolase [Acinetobacter baumannii ACICU] gi|294843432|ref|ZP_06788115.1| beta-lactamase superfamily hydrolase [Acinetobacter sp. 6014059] gi|183210385|gb|ACC57783.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Acinetobacter baumannii ACICU] gi|322507396|gb|ADX02850.1| RNase Z [Acinetobacter baumannii 1656-2] gi|323518706|gb|ADX93087.1| beta-lactamase superfamily hydrolase [Acinetobacter baumannii TCDC-AB0715] Length = 318 Score = 54.4 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VDTG Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDTGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQARLSLQNLIAICITHVHGDHCYGL 72 >gi|153009736|ref|YP_001370951.1| beta-lactamase domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151561624|gb|ABS15122.1| beta-lactamase domain protein [Ochrobactrum anthropi ATCC 49188] Length = 558 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 70/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L K + P ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEA------KRQSEHGAP-----------EIPITIYKAGEKFEVGP 136 Query: 164 ILQQ-----HGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 + H + G V + D P SL + + Sbjct: 137 FKVEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGDAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + IE + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIENARGRVAITT 235 >gi|83951142|ref|ZP_00959875.1| putative periplasmic protein [Roseovarius nubinhibens ISM] gi|83839041|gb|EAP78337.1| putative periplasmic protein [Roseovarius nubinhibens ISM] Length = 283 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 87/260 (33%), Gaps = 45/260 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRP 105 R ++VD G + + V +D +L TH H+DH + + RP Sbjct: 28 RIGERVILVDAGLGVTRGLCDQGVHPREVDTILITHLHSDHYLELGPFLHTAWVGGLTRP 87 Query: 106 IDVYAAPDCMKHLFESF--RYCFK---ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + V P + ++ F F ++D + IE G I+ Sbjct: 88 VRVIG-PRGLGAYWKGFLTSMSFDIDLRIEDEGRCDLAGLAQIEEMSEGRLFDDGGLCID 146 Query: 161 AIPILQQHGR-ISSLGFRF---GNVAYCT-DVNAFPAESLEKLQNLDFLI--------ID 207 A + H I S RF G A + D +F + Q D L+ +D Sbjct: 147 A--LRNHHPPIIESYALRFEAMGKRAVLSGDTASF-EPLIAFAQGADLLVHEALLEAGVD 203 Query: 208 AL---------KNGLH--SSHFSLSESLKKIELINPKNAILTH--------MHVDLDYDM 248 AL + H SH + E+ + L + LTH + L Sbjct: 204 ALCAGLNLTDGRLKRHLMQSHTTAQEAGRIASLAGVDHLALTHFVPGADPSLTPALWEAA 263 Query: 249 VLKSTPSRVVPAFDGMQFSS 268 V ++ R+ DGM+ + Sbjct: 264 VRETWQGRLSLGRDGMRIAV 283 >gi|313683214|ref|YP_004060952.1| metal dependent phosphohydrolase [Sulfuricurvum kujiense DSM 16994] gi|313156074|gb|ADR34752.1| metal dependent phosphohydrolase [Sulfuricurvum kujiense DSM 16994] Length = 800 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 21/138 (15%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG---LRGYFLKQKRPIDVY 109 N ++D G + + + V+ I+A+ +TH H DHI ID L + + +P+ +Y Sbjct: 25 NDHTLIDAG-NIMHSLGADAVVKINAIFFTHSHLDHI--IDSAFLLDNVLVHRNKPLTLY 81 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG--------VIEA 161 P+ + L E F +D +P ++ + + I Sbjct: 82 GLPETIASLKEHF------FNDTIWPDFTKINLVGTHQPSLEYVEINYNQRYMMEDDIVL 135 Query: 162 IPILQQHGRISSLGFRFG 179 PI H ++ G+ Sbjct: 136 TPIPSNHA-VACCGYIIE 152 >gi|309792597|ref|ZP_07687059.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] gi|308225411|gb|EFO79177.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] Length = 292 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 81/285 (28%), Gaps = 75/285 (26%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + V R VI+D G + RE + +L TH H DHI G Sbjct: 14 TCVEVRVGEICVILDAGTGLRPLGEALGREANPPNTIHLLITHTHWDHIIGFPFFAPI-F 72 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG---- 156 I++Y L + + PI +E+ + Sbjct: 73 NPHNRIEIYGLQRTQSSLRTTIANALSDP--------LMPISLEDLRADMNFHEIHDGVR 124 Query: 157 ----GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAF------------------ 190 G + H +L +R + + + D F Sbjct: 125 LDIEGRVRISTAQANH-PYRALAYRIESDEAALVFIPDTGPFHTILFGDERVAWTGRPVP 183 Query: 191 -PAESLEKLQN-----------LDFLIIDA------LKNGLHSSHFSLSESLKKIELINP 232 E L L + D++I D+ H H + ++ + E Sbjct: 184 NTEEELATLADMRAKVIALAHRADWMIYDSQFTDEQYARFPHWGHSTPGQAREIAEAAGV 243 Query: 233 KNAILTHMHVDLDYDM--------VLKSTPS---RVVPAFDGMQF 266 K+ +L H D + + PS ++ AF+GM+ Sbjct: 244 KHLLL--FHHDPHHTDAQIDAMLAAQHALPSSNLKISAAFEGMEL 286 >gi|199598195|ref|ZP_03211617.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] gi|199590956|gb|EDY99040.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus HN001] Length = 560 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 22/137 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + +H HAD + + + P+ V+ + + Sbjct: 50 PDF--SYLTENADRIAGIFLSHGHADAVGALP-----YFLVDHPVPVFGSELTIA----- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + + VI+ V G + H SLG Sbjct: 98 MAKVFMQHDSKA-KKFKDFHVIDEKSV-----IDFGDVSVSFFKTTHSIPGSLGIDIETS 151 Query: 179 -GNVAYCTDVNAFPAES 194 G + Y D P+ + Sbjct: 152 EGQIVYTGDFKFDPSAT 168 >gi|198416079|ref|XP_002120065.1| PREDICTED: similar to Bacterially-derived sulfatase required for use of alkyl- and aryl-sulfates as sulfur sources; Bds1p [Ciona intestinalis] Length = 613 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 23/212 (10%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 G++ +I+DT LRE+ + A++ TH HADHI G L ++ Sbjct: 73 EGTDGVIIIDTTESNDAGRAAYSALREKSNKPLKAIILTHFHADHITGARALLEDASQRG 132 Query: 104 RPIDVYAAPDCMKHLFE-------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 ++VYA + FR + P + + Sbjct: 133 WKVNVYAHSSTRNEIARADSVYATRFRRAVRQFGHILVPNLERINCGLGLAYVRNRQPVN 192 Query: 157 GVIEAIPILQQHGRISSLGFRFGNV---AYCTD--VNAFPAESLEKLQNLDFL----IID 207 I + + G F + D P + + + Sbjct: 193 QTISPTHTYEDRKTFTVAGITFDLIHTPGETNDQTTVWIPEK-KAFFPGDNIYQAFPNLY 251 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 A++ H S ES+ ++ +N K + +H Sbjct: 252 AIRGSPHRDVKSWYESMDFLKSLNAKYMVPSH 283 >gi|222147521|ref|YP_002548478.1| metal dependent hydrolase [Agrobacterium vitis S4] gi|221734510|gb|ACM35473.1| metal dependent hydrolase [Agrobacterium vitis S4] Length = 238 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADHI 89 +S+ I+ RG T+++D G +L + IDA+L TH H DH+ Sbjct: 11 TSIHINCYLVRGGGRTILIDAGAGGFKQWGGRLKTNLLLAGIQPSEIDAILLTHAHPDHV 70 Query: 90 HGIDGLRG 97 G+ G Sbjct: 71 GGLMDASG 78 >gi|254457216|ref|ZP_05070644.1| ribonuclease Z [Campylobacterales bacterium GD 1] gi|207086008|gb|EDZ63292.1| ribonuclease Z [Campylobacterales bacterium GD 1] Length = 315 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 55/202 (27%), Gaps = 45/202 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG + S N + D G Sbjct: 1 MKLTFLGT-----------------SAGKPTKERNVSAL--GFELDQDNKWYLFDCGEAT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY-----FLKQKRPIDVYAAPDCMKH 117 Q+L + +D + TH H DH +G+ GL +P+ +Y Sbjct: 42 QHQLLHSHLSVAKLDTIFITHLHGDHYYGLPGLISSKKLDTCF---KPLSIYGP-----V 93 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 F C + ++ + ++ D K ++ +P++ I S F Sbjct: 94 GIRKFLECSVGTSEEKLGFKLDIVEFKSGDE---FKFDKFSLKVLPLVH---SIDSFAFY 147 Query: 178 FGNVAYCTD-VNAFPAESLEKL 198 D N E L L Sbjct: 148 IKE----DDITNKINEEKLRAL 165 >gi|104773888|ref|YP_618868.1| beta-lactamase family hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513895|ref|YP_812801.1| beta-lactamase superfamily hydrolase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275335|sp|Q04B09|RNZ_LACDB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123251929|sp|Q1GAM2|RNZ_LACDA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|103422969|emb|CAI97642.1| Putative hydrolase (beta-lactamase superfamily III) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093210|gb|ABJ58363.1| RNAse Z [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 309 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 34/178 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG C P R SSL + + E + D G Sbjct: 1 MELEFLGT---------------C-SGQPSKLRNVSSLALKLLDELNEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 S R + +YP + + +E + + E H RI S GFR Sbjct: 102 TSLR---ISKTKISYP--IKFVTLEEGGKIVSERG----FEVYTEKLDH-RIDSWGFR 149 >gi|269798322|ref|YP_003312222.1| beta-lactamase [Veillonella parvula DSM 2008] gi|269094951|gb|ACZ24942.1| beta-lactamase domain protein [Veillonella parvula DSM 2008] Length = 268 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 32/172 (18%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H+DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMAQVEGIFVSHEHSDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + P Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNRLIELTKGSLTL----GSLIVEPFSV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 H +G TD L ++ + L+++A H Sbjct: 124 SHDAADPIGINVFAGNNKATIVTDTGVISDNILRRIDDTTLLVLEA-NYDPH 174 >gi|163738818|ref|ZP_02146232.1| beta-lactamase-like protein [Phaeobacter gallaeciensis BS107] gi|161388146|gb|EDQ12501.1| beta-lactamase-like protein [Phaeobacter gallaeciensis BS107] Length = 555 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPH 85 + + G ++VD G PD L+E+ ++ V TH H Sbjct: 21 AYVYGYGKPGKERLILVDLGVTFPDMDSSPGVDLIMPDIRW--LKERADQLEGVFITHAH 78 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD----RTYPPI--VN 139 DHI + L + + +YA ++ +P + + Sbjct: 79 EDHIGAVAHL-----YRDLNVPIYARAFTANLARRKMDEAGLDSEEVKTVSAWPEVTKLG 133 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF-----PAES 194 P + + + +GG++ P GRI G + TD E Sbjct: 134 PFTVGVAPISHSIPESGGLVIDTPA----GRIVHTGD------FKTDPTPIVGEAFDPEM 183 Query: 195 LEKL--QNLDFLIID 207 ++ + L+ D Sbjct: 184 WAEIAKDGVKALVCD 198 >gi|157694427|ref|YP_001488889.1| metallo-beta-lactamase family protein [Bacillus pumilus SAFR-032] gi|157683185|gb|ABV64329.1| metallo-beta-lactamase family protein [Bacillus pumilus SAFR-032] Length = 264 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 51/222 (22%) Query: 52 SNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +VD G + Q+ R + +D + TH H+DHI G+ + +K Sbjct: 22 GEHAFLVDAGLSGKQMVELLSQIDR-KPEDLDGIFVTHEHSDHIKGLG-----VMARKYK 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA K + ++ ++ + D+ G +E+ + Sbjct: 76 LPVYANAKTWKAM-------------ESHIGKIDTEQKFHFDMETVQSFGGLDVESFGVS 122 Query: 166 Q----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 + G R +A TD +Q+ + + + L+ G + Sbjct: 123 HDAAEPMFYVFHYGGR--KLALMTDTGYVSDRMKGIIQSANTFVFESNHDVGMLQMGRYP 180 Query: 216 -----------SHFSLSE-SLKKIELIN--PKNAILTHMHVD 243 H S + +L ++I L H+ D Sbjct: 181 WSIKRRILSDVGHVSNEDAALAMTDVIGDATSRIYLAHLSQD 222 >gi|88812028|ref|ZP_01127281.1| Coenzyme PQQ biosynthesis protein B [Nitrococcus mobilis Nb-231] gi|88790912|gb|EAR22026.1| Coenzyme PQQ biosynthesis protein B [Nitrococcus mobilis Nb-231] Length = 252 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 57/260 (21%) Query: 57 IVDTGPDFYMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +V+ PD Q+ R +L I AV+ DH G+ L++ + + Sbjct: 2 LVNASPDLRQQLTRTPLLQPARASRDTGIQAVILIDSQLDHTSGL-----LTLREGKRLP 56 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPILQ 166 +Y + L +F + L+ + I + + + G +AIP+ Sbjct: 57 LYTTAAVYQDLTGAFP-LVRVLEHYCGS---SWHEIPLHGRGFTVAEIPGLEFQAIPLAS 112 Query: 167 QHGRIS----------SLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL- 209 + ++G G + Y + + L D +++D Sbjct: 113 KAPPYCPQHSTPRPGETIGLLVRDPVTGGTIFYAPGIGRIEPRLVSTLAQADCVLLDGTF 172 Query: 210 -------------KNGLHSSHF---SLSESLKKIELINPKNAILTHMHV-----DLDYDM 248 K H L+ + + K IL H++ D D Sbjct: 173 WSEDEMQRLGVGKKRAADMGHLPLNGPGGLLELLRGLKVKRKILIHINNTNPILDDDSPE 232 Query: 249 VLKSTPSRVVPAFDGMQFSS 268 + + A+DGM Sbjct: 233 RQQLAREGIELAWDGMHLRL 252 >gi|229578965|ref|YP_002837363.1| ribonuclease Z [Sulfolobus islandicus Y.G.57.14] gi|229582282|ref|YP_002840681.1| ribonuclease Z [Sulfolobus islandicus Y.N.15.51] gi|284997568|ref|YP_003419335.1| ribonuclease Z [Sulfolobus islandicus L.D.8.5] gi|259494144|sp|C3NHZ9|RNZ_SULIN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494145|sp|C3NDQ2|RNZ_SULIY RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|228009679|gb|ACP45441.1| ribonuclease Z [Sulfolobus islandicus Y.G.57.14] gi|228012998|gb|ACP48759.1| ribonuclease Z [Sulfolobus islandicus Y.N.15.51] gi|284445463|gb|ADB86965.1| ribonuclease Z [Sulfolobus islandicus L.D.8.5] Length = 291 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 93/295 (31%), Gaps = 73/295 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R + + R +++D G Sbjct: 2 IQIFFLGTGAGS----------------PSKKRKLPAFLVRR-----EGLNILLDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++ + SI + TH H DH+ G+ G+ L +K + + D L+ Sbjct: 41 QYTLMNNKLGINSIKIIGITHMHGDHVFGLLGVIASMGLLDRKETLYILGPRDLKDFLYT 100 Query: 121 SFRY-----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 SF Y FK Y I I ++S G +I Sbjct: 101 SFEYSKFNPSFKIEFIDNY--NDQNITIATFKTCHTVESQGYLISERDRVKIDEEKLEKE 158 Query: 162 ------IPILQQHGRISSLGFRF------------GNVAYCTDVNAFP-AESLEKLQNLD 202 + + G+ +F VAY D P +E ++ +D Sbjct: 159 KIKDWRVMRKLKEGKTVEYNGKFLKPEDYLVIKRGLKVAYTGDT--IPCQSVIESVKGVD 216 Query: 203 FLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 LI D+ S+ H +++++ K + K LTH+ Y+ V + Sbjct: 217 LLIHDSTFLNEPSAFTYGHSNVADAAKVALEASVKLLALTHISPR--YEDVTEHL 269 >gi|307706046|ref|ZP_07642867.1| ribonuclease Z [Streptococcus mitis SK564] gi|307620404|gb|EFN99519.1| ribonuclease Z [Streptococcus mitis SK564] Length = 309 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 85/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--------------CFKALDDRTYPPIVNPIV-----------IENN 146 + L Y F+ Y ++ + +E Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKIFETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCT------------DVNAFPA 192 +K+AG + ++G+ L G Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDVVLEDGTEIKAADYISAPRPGKIITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHIS 276 >gi|300932725|ref|ZP_07147981.1| hypothetical protein CresD4_01555 [Corynebacterium resistens DSM 45100] Length = 267 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 80/293 (27%), Gaps = 57/293 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S P P +S + R +++D GP Sbjct: 1 MELVVLGCSGS-----------VAGPDRP------ASGYVVR---SDGTEDLLMDIGPGV 40 Query: 65 YMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLF 119 + + ID V ++H HADH L + R +A + Sbjct: 41 LAAM--QATEDIDPAQCHVAFSHMHADHCLDFPSLLVW-----RRFHPHAPSQRVHDFIG 93 Query: 120 ESFRYCFKALDDRTYPPIVNPIVI-----------ENNDVPICMKSAGGVIEAIPILQQH 168 + + YP + + D G ++ H Sbjct: 94 PRMAFEHLSRAAGDYPDQPDDFSDTFAVSHYQVGNSHFDATSWPSKNIGGLKIYAAEAVH 153 Query: 169 GR----ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFS 219 + R ++ Y D A+ + D L+ +A H Sbjct: 154 TTESYLLRVHDGRGASLVYTGDT-AYTENLVNLATGADVLLCEATWCDREFGMPQGMHMC 212 Query: 220 LSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 ++ K E ILTH+ D D + + V A+ GM+ Sbjct: 213 GQDAGKVAEQAGVGKLILTHIPPWGDSDSAVAAAKRHFTGPVEVAYPGMRVQW 265 >gi|229552132|ref|ZP_04440857.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus LMS2-1] gi|258539545|ref|YP_003174044.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] gi|229314565|gb|EEN80538.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus rhamnosus LMS2-1] gi|257151221|emb|CAR90193.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] Length = 560 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 22/137 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + +H HAD + + + P+ V+ + + Sbjct: 50 PDF--SYLTENADRIAGIFLSHGHADAVGALP-----YFLVDHPVPVFGSELTIA----- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + + VI+ V G + H SLG Sbjct: 98 MAKVFMQHDSKA-KKFKDFHVIDEKSV-----IDFGDVSVSFFKTTHSIPGSLGIDIETS 151 Query: 179 -GNVAYCTDVNAFPAES 194 G + Y D P+ + Sbjct: 152 EGQIVYTGDFKFDPSAT 168 >gi|170721023|ref|YP_001748711.1| ribonuclease Z [Pseudomonas putida W619] gi|254808655|sp|B1J6H3|RNZ_PSEPW RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|169759026|gb|ACA72342.1| Ribonuclease Z [Pseudomonas putida W619] Length = 321 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 82/290 (28%), Gaps = 73/290 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K R ++ I +VD G Sbjct: 1 MDLLFLGT--SAGVPT-------------KARNVSATAVIEASGSHW----YLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK---- 116 Q+L V + A+ TH H DH G+ GL R P+D+ Sbjct: 42 QHQLLHTPLSVRDLRAIFITHVHGDHCFGLPGLLASAGMSGRTAPLDLVLPAALHDWVRL 101 Query: 117 ----------------------------------HLFESFRYCFKALDDRTYPPIVNPIV 142 L + P ++ Sbjct: 102 SLAASDSFLPFELRLLAVEQLGEWRSDTLAVSTVQLSHRVPSVAFVFTELNPEPRLDVQR 161 Query: 143 IENNDV---PICMKSAGGVIEAIPILQQHGRISSLGFR-FGNVAYCTDVNAFPAESLEKL 198 ++ + P+ + A G+ HGR R V C D N P E Sbjct: 162 LDAEGIPRGPLWGELAKGLTVEHAGRMLHGRDYLRASRPARRVIVCGD-NDNPELLAEAA 220 Query: 199 QNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +++D L+ +A + G+ H S + + E +N +LTH Sbjct: 221 KDVDVLVHEATFTQPIIARTGVSFGHSSAAAVARFAETAGVRNLVLTHFS 270 >gi|57113945|ref|NP_001009034.1| zinc phosphodiesterase ELAC protein 2 [Pan troglodytes] gi|41017795|sp|Q9GL72|RNZ2_PANTR RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|10946497|gb|AAG24920.1|AF308698_1 ELAC2 [Pan troglodytes] Length = 826 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 104/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 478 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 517 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPI 106 + Q+ R +D AV +H HADH G+ + ++ P+ Sbjct: 518 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPFHPL 576 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 577 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 636 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 637 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 691 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 692 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFNEKVGVAFDH 749 Query: 264 MQF 266 M+ Sbjct: 750 MKV 752 >gi|116255271|ref|YP_771104.1| hypothetical protein pRL110071 [Rhizobium leguminosarum bv. viciae 3841] gi|115259919|emb|CAK03013.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 276 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 21/213 (9%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S + R +I D G +L + V +D + ++H H DHI G+ + + Sbjct: 32 SCIEIRCGKHRMIFDAGSGLREAGLSMLADGVSDVD-LFFSHCHYDHIIGLPFFKAIYYP 90 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVIE 160 +++++ K F + + + D + + IE Sbjct: 91 SIN-VNIWSGHLDGKMSTREMVEQFISPPWFPVKTDICQATMNFRDFHAGQVLTPHAGIE 149 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFP----AESLEKLQNLDFLIIDA---- 208 + H ++G+R +VA D+ P SLE +++ D ++ D Sbjct: 150 IKTFMLNHPG-GAIGYRIEWQGRSVALVYDIEHNPGSYDPVSLEMMRDADLVVYDCTYNE 208 Query: 209 --LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ H + + ++ K L H Sbjct: 209 DEMQRFKGFGHSTWQHGTELAKMAGTKRFALFH 241 >gi|239502887|ref|ZP_04662197.1| Ribonuclease Z [Acinetobacter baumannii AB900] Length = 318 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQTRLSLQNLIAICITHVHGDHCYGL 72 >gi|170017531|ref|YP_001728450.1| beta-lactamase superfamily hydrolase [Leuconostoc citreum KM20] gi|254808645|sp|B1MZQ4|RNZ_LEUCK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|169804388|gb|ACA83006.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Leuconostoc citreum KM20] Length = 322 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 35/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + +H H DHI G+ G R + K P+ +Y + + Sbjct: 43 QHQILKTTLRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGADKNEPLTIYGPKGVKEFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + R P+V ++ + I +H RI S GFR Sbjct: 103 QT----ALRVSETRLSYPLVFV------ELTAGVVFDDKTFRVIAAKMKH-RIESWGFRV 151 Query: 179 G 179 Sbjct: 152 E 152 >gi|307596558|ref|YP_003902875.1| ribonuclease Z [Vulcanisaeta distributa DSM 14429] gi|307551759|gb|ADN51824.1| ribonuclease Z [Vulcanisaeta distributa DSM 14429] Length = 307 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 99/333 (29%), Gaps = 103/333 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA G+P K+ R ++ + +++D G Sbjct: 3 IRITFLGTGA--GMP-------------GKD-RYLPAILVE-----DGLRKILLDAGEGV 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL------------------RGYFLKQKR 104 ++ V I + TH H DH+ G+ GL G K Sbjct: 42 QYRLFEIGVSPLKITHIFITHLHGDHVFGLPGLLATMAMLGRKEDLVISGPSGIVNFVKS 101 Query: 105 PIDVYAAPDCMKHL-------------------------FESFRYCFKALDDRTYPPIVN 139 +++ P + + C +L+ RTY N Sbjct: 102 SMEIVGDPPFHVRIYEIEPSIGIKDVINEENFSLQCTLAKHTVPDCAYSLNWRTYVGRFN 161 Query: 140 PIVIENNDVPICM--KSAGGVIEAIP---ILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P + VPI + + G + +++ + V Y D PA+S Sbjct: 162 PERAKELGVPITLWKRLHMGETVVLNDGRVIKPEDVVEIRSSGLVKVVYTGDTA--PADS 219 Query: 195 -LEKLQNLDFLIIDALKNGLHSSHFSLSE---------------SLKKIELINPKNAILT 238 +E + LI H S FS+ E + + + + +LT Sbjct: 220 VVEISRGAQVLI--------HDSTFSMIEDGNLIWNQGHSRSVDAARVAKEAGVERLVLT 271 Query: 239 HMHV-----DLDYDMVLKSTPSRVVPAFDGMQF 266 H+ +L + P V+ A D M Sbjct: 272 HISNRYSDPELLAAEASEVFP-NVIAARDLMSL 303 >gi|262197409|ref|YP_003268618.1| beta-lactamase [Haliangium ochraceum DSM 14365] gi|262080756|gb|ACY16725.1| beta-lactamase domain protein [Haliangium ochraceum DSM 14365] Length = 283 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 18/190 (9%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 +L +H H DHI G F+ + +Y L Y Sbjct: 68 LLLSHSHWDHIQGFPFFAPVFVP-GNELTMYGNAKSPSMLEGILEGQMNPHFSPLYTIKN 126 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAES 194 I+ V A G ++ HG ++L FR + Y +DV S Sbjct: 127 LGASIDFRTVVQGESFALGEVQMRAQPNPHGGTTALAFRLEEDGKSFVYASDVGYSDDAS 186 Query: 195 L----EKLQNLDFLIIDALKNGLHSSH------FSLSESLKKIELINPKNAILTHMHVDL 244 + + D L+ D + + S E+ + + ++ H D Sbjct: 187 MAAAVAFYRGADVLLHDCTYSPEDQTTRRNRGFSSYVEAARVAVEAKVGHLVM--FHYDQ 244 Query: 245 DY-DMVLKST 253 DY D ++ Sbjct: 245 DYSDEIVDEL 254 >gi|241204103|ref|YP_002975199.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857993|gb|ACS55660.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 556 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 47/228 (20%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + VYA+ L + + + P V Sbjct: 80 DHYGALADLWP-----GLNVPVYASGFTSGLLEAKRNFEKSKIGEVPVTPFKAGDTINVG 134 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P+ G + G ++ ++ TD Sbjct: 135 PFSIEGVAVNHSIPEPMSLMIRTPV----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 185 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +L + L + +AL++G+ S +SESL+KI +T Sbjct: 186 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIENAEGRVAIT 233 >gi|327398207|ref|YP_004339076.1| Ribocuclease J [Hippea maritima DSM 10411] gi|327180836|gb|AEA33017.1| Ribocuclease J [Hippea maritima DSM 10411] Length = 551 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 36/151 (23%) Query: 53 NTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N ++VD G F + + E + A++ TH H DH+ I + Sbjct: 27 NDMILVDAGLMFPEEDMLGVDIVIPDFSYIYENKDKLRALILTHAHEDHVGAIP-----Y 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L Q + +Y + + + ++ ++ K G Sbjct: 82 LLQNINVPIYGTKLTLGLVKAKLK-------------EFKITNVQFVEIEPSRKFQIGDF 128 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 E PI H + +GF A TDV Sbjct: 129 ELEPIRTTHSIVDGVGF-----AITTDVGVI 154 >gi|313123510|ref|YP_004033769.1| ribonuclease z [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280073|gb|ADQ60792.1| Ribonuclease Z [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 309 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG C P R SSL + + E + D G Sbjct: 1 MELEFLGT---------------C-SGQPSKLRNVSSLALKLLDELNEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+LR + I + +H H DHI G+ GL R + P+ +Y + + Sbjct: 43 QHQILRTNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQGDVG-PLTIYGPAGIEQFVK 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + + +E + + E H RI S GFR Sbjct: 102 TSLR---ISKTKISYP--IKFVTLEEGGKIVSERG----FEVYTEKLDH-RIDSWGFRV 150 >gi|258508335|ref|YP_003171086.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|257148262|emb|CAR87235.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|259649651|dbj|BAI41813.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 560 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 22/137 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + +H HAD + + + P+ V+ + + Sbjct: 50 PDF--SYLTENADRIAGIFLSHGHADAVGALP-----YFLVDHPVPVFGSELTIA----- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + + VI+ V G + H SLG Sbjct: 98 MAKVFMQHDSKA-KKFKDFHVIDEKSV-----IDFGDVSVSFFKTTHSIPGSLGIDIETS 151 Query: 179 -GNVAYCTDVNAFPAES 194 G + Y D P+ + Sbjct: 152 EGQIVYTGDFKFDPSAT 168 >gi|126459716|ref|YP_001055994.1| RNAse Z [Pyrobaculum calidifontis JCM 11548] gi|166991502|sp|A3MV61|RNZ_PYRCJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|126249437|gb|ABO08528.1| RNAse Z [Pyrobaculum calidifontis JCM 11548] Length = 287 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 87/294 (29%), Gaps = 66/294 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ PK R ++ + V++D G Sbjct: 4 LKLVFLGTGGAV----------------PKADRMLPAIYLE----DWLGHRVLLDAGEGA 43 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV-------------- 108 ++L+ V S+ V TH H DH+ G+ GL + V Sbjct: 44 QYRLLQVGVSPASLTLVAVTHGHEDHVLGLPGLVITSRFLGGKVRVLAPRSMHKALERLG 103 Query: 109 ------YAAPD----------CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 YAA + F + D + + + + Sbjct: 104 VEVLEGYAAERLKITCVEVCHTVDACGWLFEWDVGYKLDLQKATGLPKWALTSLIKGHPV 163 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA---- 208 + G VI + R RF + Y D P E + +D LI +A Sbjct: 164 EVEGRVIRPEDVADPAHR------RFKRLLYTGDTGPCP-RMWETVGEVDVLIHEATFAD 216 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H + +++L+ + K ILTH+ + ++V P Sbjct: 217 DVESQKAHEEGHSTFADALEAARALRAKVLILTHISARYPDKSRHRQLAAQVTP 270 >gi|312135593|ref|YP_004002931.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor owensensis OL] gi|311775644|gb|ADQ05131.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor owensensis OL] Length = 238 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 77/217 (35%), Gaps = 36/217 (16%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV----LREQVLSIDAVLYTHPHADHIHGIDG 94 +S SE ++D G + + L E+ +I+ VL TH H+DHI + Sbjct: 21 NTSAYFEFDSEL-----FLIDCGEGIFSSLYKLKLLEKYKTIN-VLITHTHSDHIATLGH 74 Query: 95 LRGYFLK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L + + + ++ + + +L +I+ + I + Sbjct: 75 LLLFCFYELNKRVKIFFPEESL----------ISSLLSGMGVAKYTYELIKLQNPFIYKE 124 Query: 154 SAGGVIEAIPILQQH-GRISSLGFRFGN----VAYCTDVNAFPAESLEK-LQN-LDFLII 206 + I I Q H I G+ Y D LEK L+N +DFL Sbjct: 125 I----LTIISIEQIHVNEIPCFGYLIKTKECCFFYSGDSRTLNRIILEKFLKNEIDFLYQ 180 Query: 207 DALKNGLHSSHFSLSESLKKIELINP---KNAILTHM 240 D + +H LS S + LI P KN H+ Sbjct: 181 DTCFENTNENHPHLSLS-ELTYLIPPEKRKNVYCIHI 216 >gi|227827458|ref|YP_002829237.1| ribonuclease Z [Sulfolobus islandicus M.14.25] gi|229584673|ref|YP_002843174.1| ribonuclease Z [Sulfolobus islandicus M.16.27] gi|238619614|ref|YP_002914439.1| ribonuclease Z [Sulfolobus islandicus M.16.4] gi|259494140|sp|C3N554|RNZ_SULIA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494141|sp|C4KGQ7|RNZ_SULIK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494143|sp|C3MYG0|RNZ_SULIM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|227459253|gb|ACP37939.1| ribonuclease Z [Sulfolobus islandicus M.14.25] gi|228019722|gb|ACP55129.1| ribonuclease Z [Sulfolobus islandicus M.16.27] gi|238380683|gb|ACR41771.1| ribonuclease Z [Sulfolobus islandicus M.16.4] gi|323474513|gb|ADX85119.1| ribonuclease Z [Sulfolobus islandicus REY15A] gi|323477249|gb|ADX82487.1| ribonuclease Z [Sulfolobus islandicus HVE10/4] Length = 291 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 93/295 (31%), Gaps = 73/295 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R + + R +++D G Sbjct: 2 IQIFFLGTGAGS----------------PSKKRKLPAFLVRR-----EGLNILLDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++ + SI + TH H DH+ G+ G+ L +K + + D L+ Sbjct: 41 QYTLMNNKLGINSIKIIGITHMHGDHVFGLLGVIASMGLLDRKETLYILGPRDLKDFLYT 100 Query: 121 SFRY-----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 SF Y FK Y I I ++S G +I Sbjct: 101 SFEYSKFNPSFKIEFIDNY--NDQNITIATFKTCHTVESQGYLISERDRVKIDEEKLEKE 158 Query: 162 ------IPILQQHGRISSLGFRF------------GNVAYCTDVNAFP-AESLEKLQNLD 202 + + G+ +F VAY D P +E ++ +D Sbjct: 159 KIKDWRVMRKLKEGKTVEYNGKFLKPEDYLVIKRGLKVAYTGDT--IPCQSVIESVKGVD 216 Query: 203 FLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 LI D+ S+ H +++++ K + K LTH+ Y+ V + Sbjct: 217 LLIHDSTFLNEPSACTYGHSNVADAAKVALEASVKLLALTHISPR--YEDVTEHL 269 >gi|225010729|ref|ZP_03701198.1| coenzyme PQQ synthesis protein B [Flavobacteria bacterium MS024-3C] gi|225005100|gb|EEG43053.1| coenzyme PQQ synthesis protein B [Flavobacteria bacterium MS024-3C] Length = 295 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 82/259 (31%), Gaps = 36/259 (13%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G P + + C ++ +S + G + I D PDF Sbjct: 22 KLYVLGTLQDGGSPHMGCEKLCCAVQKSQDY-------VSSIGVVGERQSFIFDATPDFV 74 Query: 66 MQ--VLREQVLSID-AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 Q L+E + TH H H G+ L + + VYA P + L ++ Sbjct: 75 SQTNYLKEVSGHKSVTIFLTHAHMGHYTGLMHLGREAYNAVKTM-VYAMPKMVHFLSKNG 133 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---G 179 + + N ++ + + + + + ++G+ Sbjct: 134 PW-------SQLVSLKNIALMPLQENQTVFLDQSLSVTPLKVPHRDEYSETVGYLIKGKN 186 Query: 180 NVA-YCTDVNAFPA---ESLEKLQNLDFLIIDAL--------KNGLHSSHFSLSESLKKI 227 A Y D++ + + ++ +D+ +D + H +SE+ + Sbjct: 187 KTALYVPDIDKWSKWNRSIVALVKKVDYAFLDGTFFADGELPRPMSEVPHPFVSETAALL 246 Query: 228 ELINPK---NAILTHMHVD 243 + K H++ Sbjct: 247 GSLPLKERQKVYFIHLNHS 265 >gi|163759525|ref|ZP_02166610.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] gi|162283122|gb|EDQ33408.1| metal dependent hydrolase [Hoeflea phototrophica DFL-43] Length = 555 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 56/166 (33%), Gaps = 40/166 (24%) Query: 52 SNTTVIVDTGPDFYMQVL---REQVLSID----------AVLYTHPHADHIHGIDGLRGY 98 ++VD G F L + ID A++ TH H DH G+ + Sbjct: 32 DRDWIMVDCGVTFPGPELPGVDLVLPDIDFVKKLGGRLKAIIITHAHEDHYGGLAQIWP- 90 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDV 148 + + VYA+ L Y FKA + T P V N+ + Sbjct: 91 ----QLKVPVYASAFTAGMLEAKRAYERTRAEVPVTLFKAGERFTVGPFEIEPVAVNHSI 146 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAF 190 P A G P+ G++ G ++ ++ TD N F Sbjct: 147 PEPFSLAIG----TPL----GKLIHTGDWKIDTTPSLGPLTDENRF 184 >gi|218781040|ref|YP_002432358.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218762424|gb|ACL04890.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 272 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 34/215 (15%) Query: 79 VLYTHPHADHIHGIDGLRGYF---LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +L +H H DHI G +F Q I + A K L + Y + +P Sbjct: 67 LLISHTHWDHIQGF----PFFSPGYVQGNVIRIMGAHQINKGLETAMHY---QQQYQNFP 119 Query: 136 PIVN--PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV-- 187 +++ P I + + G ++ H S +R +V Y TD Sbjct: 120 VLLSQMPSRITFKALEEGVGHRIGEVDIETAEMNHPG-GSFAYRVTWKGKSVVYATDTEH 178 Query: 188 -NAFPAESLEKLQNLDFLIID-ALKNGLHSS-----HFSLSESLKKIELINPKNAILTHM 240 ++ + ++ D LI D + + H + E +K N K+ L H Sbjct: 179 YDSVDHKLTPLCKDADILIYDSTYTPEEYPNFKGYGHSTYEEGIKLARAANVKSLHLFH- 237 Query: 241 HVDLDYDMVLKSTP-------SRVVPAFDGMQFSS 268 H D +L + + A +G + Sbjct: 238 HHPNHTDEMLDAMQKKARADFPQTYVAREGWELEI 272 >gi|149409772|ref|XP_001509223.1| PREDICTED: similar to D29 [Ornithorhynchus anatinus] Length = 509 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 38/143 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R S++ E + D G Sbjct: 2 SMEITFLGTG----------------SAYPSPTRGASAVAFRYEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q ++ + + + TH H DH+ G+ L+ ++P+++Y Sbjct: 41 TQTQFMKSHLKAGRVSKIFVTHLHGDHVFGLPGLLCTISLQSSPTVSRQPVEIYGPEGLR 100 Query: 116 KHLFES---------FRYCFKAL 129 ++ + F Y L Sbjct: 101 DFVWRALALSRSELVFPYVVHEL 123 >gi|257076149|ref|ZP_05570510.1| metallo-beta-lactamase superfamily hydrolase [Ferroplasma acidarmanus fer1] Length = 249 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 71/218 (32%), Gaps = 56/218 (25%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSIDA----VLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I+D G + ID + +H H+DH G + K K Sbjct: 20 DEYDAIIIDCGISMKKFSEKTSQFQIDGLEKSIFISHEHSDHSAG---AKAISRKLKA-- 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+Y+ ++ L Y I + A G P+ Sbjct: 75 DLYSRSGTLEKLHLENSY------------------------SINGEVAIGNFTVTPVHV 110 Query: 167 QHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH-- 214 H + + + R ++ +D+ E L++++N + + I+A LKNG + Sbjct: 111 NHDAVDPVVYVIRNRGVKISVVSDLGIMNDELLDEMKNSNIMAIEANHDPEMLKNGPYTE 170 Query: 215 ---------SSHFSLSESLKKIELINPKNA--ILTHMH 241 H S +S + I ILTH+ Sbjct: 171 ALKRRIRSDHGHLSNEQSAEAIYSSASDGTSIILTHLS 208 >gi|154148668|ref|YP_001407259.1| metallo-beta-lactamase family protein [Campylobacter hominis ATCC BAA-381] gi|153804677|gb|ABS51684.1| metallo-beta-lactamase family protein [Campylobacter hominis ATCC BAA-381] Length = 677 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 25/159 (15%) Query: 52 SNTTVIVDTGPDFY-MQVL------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N+ +IVD G F +L R+ I A+ TH H DHI + Y Sbjct: 151 ENSAIIVDVGMSFPNENMLGVDLVIPDFSYVRKIKEKIKAIFITHAHEDHIGAL----PY 206 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV---PICMKSA 155 F K+ +YA P + + F + + PI + + D I + + Sbjct: 207 FFKEFNY-PIYATPLTLGMISNKFEEHELKAERNFFRPIQKRKIYQAGDFGVEFIHITHS 265 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 A+ I + G I G F+ + Y TD++ Sbjct: 266 IIDSSALAITTKAGTIIHTGDFKIDHTPIDGYPTDLHRL 304 >gi|307942992|ref|ZP_07658337.1| coenzyme PQQ synthesis protein B [Roseibium sp. TrichSKD4] gi|307773788|gb|EFO33004.1| coenzyme PQQ synthesis protein B [Roseibium sp. TrichSKD4] Length = 312 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 103/327 (31%), Gaps = 78/327 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN-------PKNRRTRSSLKISRVSERGSNTTVI 57 +LG A G P+ + P RT+SS+ S SE + + Sbjct: 1 MKIRVLGAAAGGGFPQWNCNAPLSRSVRHLQPGFLP---RTQSSIAASSDSENWA----V 53 Query: 58 VDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + PD Q+ LR I +V+ T+ DHI G+ L++K Sbjct: 54 FNASPDIRQQIGATPDLQPRQDGPLRS--TPIRSVVLTNADVDHIAGL-----LTLREKE 106 Query: 105 PIDVYAAPDCMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI--E 160 P +YA + L + F A DR P+ +E D PI + ++ + Sbjct: 107 PFTLYATRRVLDTLAANSIFNVLDPAFVDRRELPLEGLTELEGPDGPIGLSIESFLVPGK 166 Query: 161 AIPILQQHGRISSLGFRFGNVA-----------------YCTDVNAFPAESLEKLQNLDF 203 L+ G G + G+ Y + ++L Sbjct: 167 VALFLENEGETG-FGTKEGDTVGLAIRTSPTTPQKKTLFYVPGCALVENDLTQRLSGGGC 225 Query: 204 LIID--------------ALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMHVD--- 243 L+ D K G H S+S SL+ K I H++ Sbjct: 226 LMFDGTVFEDDEMAQTGVGTKTGARMGHISMSGENGSLEAFRETPLKRRIYIHINNTNPV 285 Query: 244 LDYDMVLKST--PSRVVPAFDGMQFSS 268 LD T + A+DGM+ Sbjct: 286 LDPASEQAGTVRKAGWEIAYDGMELEL 312 >gi|300856548|ref|YP_003781532.1| putative hydrolase [Clostridium ljungdahlii DSM 13528] gi|300436663|gb|ADK16430.1| predicted hydrolase [Clostridium ljungdahlii DSM 13528] Length = 274 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N ++D+G +Y + V I+ ++ TH H DH GI + K + Sbjct: 45 GNKNYLIDSGAAYYTNRVIKYLNSNNVNKIEGIILTHYHDDHYDGIYNIAKSTKAHKVYL 104 Query: 107 D------VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 Y+ D + + S Y K + Y + + PI G +E Sbjct: 105 PDYENNIKYSIADKLLKMGVSVEYIGKGWSVKHYGVNLKAV------GPIYKD---GSVE 155 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESL---EKLQNLDFLIIDALKNGLHSSH 217 + G+I L + F D + ++L+ D L H Sbjct: 156 NNNSIVLQGKIGGLNYLFAG-----DCEKREENDMITTKQLKKCDVL------KVPHHG- 203 Query: 218 FSLSESLKKIELINPKNAILT 238 + S ++ + I PK AI+T Sbjct: 204 LNTSTMVEFLNKIQPKVAIVT 224 >gi|172040543|ref|YP_001800257.1| hypothetical protein cur_0863 [Corynebacterium urealyticum DSM 7109] gi|171851847|emb|CAQ04823.1| conserved hypothetical protein [Corynebacterium urealyticum DSM 7109] Length = 740 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 35/139 (25%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +++D G PDF L ++ ++A++ TH H DHI I Sbjct: 200 DGRLLLIDCGVLFPSSGEPGVDLILPDF--SYLDDKWDRVEALVITHGHEDHIGAI---- 253 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + LKQ+ I + A+ + K + R P IV + + Sbjct: 254 PWLLKQRADIPIVASRFTAALIQA------KTQEHRQRPKIVEVNDQSHVNY-------- 299 Query: 157 GVIEAIPILQQHGRISSLG 175 G + H LG Sbjct: 300 GPFDLRFWNVNHSIPDCLG 318 >gi|313639669|gb|EFS04460.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL S4-171] Length = 122 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 17/96 (17%) Query: 39 RSSLKISRVSE-----RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + ++VD G + QV R + +DA+L TH H+D Sbjct: 16 RFSILASGSSGNATLVETGDQKILVDCGLSGKKMEGLFAQVGR-DMSDLDAILITHEHSD 74 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 HI G+ L +K + +YA + + Sbjct: 75 HIKGLG-----VLARKYKLPIYANAKTWQAMDNMIG 105 >gi|256847026|ref|ZP_05552472.1| ribonuclease Z [Lactobacillus coleohominis 101-4-CHN] gi|256715690|gb|EEU30665.1| ribonuclease Z [Lactobacillus coleohominis 101-4-CHN] Length = 313 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 32/178 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + ER + + D G Sbjct: 1 MQIEFLGTGAGS----------------PSKQRNVSSLALRLLEERNAI--WLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + I+ + TH H DHI G+ GL Q P+ +Y + + Sbjct: 43 QHQILNTTIRPRKIEKIFITHLHGDHIFGLPGLLSSRSFQGGNEPLTIYGPVGIKEFVQT 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + R PI + ++ + + H +I G+R Sbjct: 103 T----LRVSESRLSYPIKFVEITDDGQL-----FSDQTFTVYAKKLDH-KIDCFGYRV 150 >gi|284989911|ref|YP_003408465.1| beta-lactamase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284063156|gb|ADB74094.1| beta-lactamase domain protein [Geodermatophilus obscurus DSM 43160] Length = 246 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 82/248 (33%), Gaps = 47/248 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T++GC S P P S + R V++D G Sbjct: 1 MRLTVVGCSGSGPGPT--------SPA--------SCYLVEHDGFR-----VLLDLGNGA 39 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAAPDCM 115 +Q L ++DA+ +H HADH + + + + RP+ +YA P Sbjct: 40 FGTLQSL-ADPATVDALYLSHLHADHCL---DVAPFIVWHRYSGRSRGRPVPLYAPPGAD 95 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + L ++ L+D +++ + + +E H + G Sbjct: 96 RRLASAYYGDGAPLEDVFDFTVLDGTPFDLGPFQVRTVRTAHPVEC------HAVRLTAG 149 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG----LHSSHFSLSESLKKIELIN 231 R ++ Y D A A +E + D L+ +A H + E+ + Sbjct: 150 GR--SLVYTGDTGA-SAAVVELARGADVLLAEAAHPDVPGLPPDLHLTGREAGEHAAAAG 206 Query: 232 PKNAILTH 239 +LTH Sbjct: 207 VGRLLLTH 214 >gi|88602830|ref|YP_503008.1| sulfohydrolase/glycosulfatase, Zn-dependent hydrolase [Methanospirillum hungatei JF-1] gi|88188292|gb|ABD41289.1| sulfohydrolase/glycosulfatase, Zn-dependent hydrolase [Methanospirillum hungatei JF-1] Length = 248 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 72/227 (31%), Gaps = 35/227 (15%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAV----------LYTHPHADHIHGIDGL 95 S+ G T + +DT F + E I V ++H H DHI G+ L Sbjct: 15 YTSKTGYTTCITIDTPDCFIILDAGEGFTKIPDVYLCIKKPALLFFSHFHLDHISGLHTL 74 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + +Y P + F Y + D P+ + E Sbjct: 75 AR-CRFEGG-LSIYGPPGV--QILSGFIGYPYTVPIDELTYPVTITELPEGRSDLCIPVQ 130 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG---NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL- 209 ++ P+ G+RF +A+CTD P E + L D LI + Sbjct: 131 TAFLVHTQPV---------FGYRFEFSKTIAFCTDTG--PCEGILTLGAGADLLITECAY 179 Query: 210 ---KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 + H + +++ L H DL Y + + Sbjct: 180 LPGQENPGWPHLNPEVAVRLATEAGADQLALVHFAADL-YTTLDQRL 225 >gi|86143119|ref|ZP_01061541.1| ribonuclease Z [Leeuwenhoekiella blandensis MED217] gi|85830564|gb|EAQ49023.1| ribonuclease Z [Leeuwenhoekiella blandensis MED217] Length = 306 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P++ +S + N ++D G Sbjct: 1 MKLTILG----------------CYAATPRSFTNPTSQVLQI-----KNHLFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 +++ R +V I + +H H DH G+ GL F +++ + VY + + Sbjct: 40 QVELRRNKVKFSKIKHIFISHLHGDHFFGLVGLISTFRLLNREKELHVYGPKGIKQAITL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + YP + +E+ + + + +E IP+ RI + GF F Sbjct: 100 QLK---LSNSWTNYP--LYFHELESKEPQLIFEDEKVSVETIPLKH---RIYANGFLFK 150 >gi|153209525|ref|ZP_01947421.1| metallo-beta-lactamase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706446|ref|YP_001424815.1| metal-dependent hydrolase [Coxiella burnetii Dugway 5J108-111] gi|165923924|ref|ZP_02219756.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 334] gi|212218787|ref|YP_002305574.1| metal-dependent hydrolase [Coxiella burnetii CbuK_Q154] gi|120575318|gb|EAX31942.1| metallo-beta-lactamase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154355732|gb|ABS77194.1| metal-dependent hydrolase [Coxiella burnetii Dugway 5J108-111] gi|165916616|gb|EDR35220.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 334] gi|212013049|gb|ACJ20429.1| metal-dependent hydrolase [Coxiella burnetii CbuK_Q154] Length = 254 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 41/272 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ + N +S++ + ++ +++D G D Sbjct: 1 MKLIFLGSGSAF--------------ADISNN-FQSNILLE----NSNHKRLLIDCGTDA 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLF- 119 + + + ID+V +H H DH+ G++ YF + ++ P + L+ Sbjct: 42 HHSLKNVNLRYADIDSVYVSHFHFDHVGGLEWLAFSAYFDPAVKKPKLFIHPSMLNILWD 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GR--ISSLGF 176 ++L + + + E + + H G+ + S G Sbjct: 102 HVLSGGLQSLKGESPATLETYFTLAPIREEKYFTWESINFEMVKTIHVHNGKLLLPSYGL 161 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELIN 231 F + TD FP + + D + D + H + + I Sbjct: 162 FFSLEKTKIFITTDTQFFPHRYADYYREADLIFHDCEIDKTKTGVHAHFQQLMNLNPAIK 221 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 K L Y P F G Sbjct: 222 SK-MWL--------YHYSENDLPDAKAAGFQG 244 >gi|88802394|ref|ZP_01117921.1| ribonuclease Z [Polaribacter irgensii 23-P] gi|88781252|gb|EAR12430.1| ribonuclease Z [Polaribacter irgensii 23-P] Length = 304 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 95/291 (32%), Gaps = 78/291 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG C P+ +S + +N ++D G Sbjct: 2 INLTILG----------------CHSATPRVNAFPTSQYLEI-----NNHHFLIDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAA----PDCMK 116 Q+ + +V I+ + +H H DH +G+ GL + L +++ + ++ ++ Sbjct: 41 QRQMRKYKVGFSKINHIFISHLHGDHFYGLVGLLSTYGILSREKEMHIFGPKGIKAATLQ 100 Query: 117 HLF-----ESFRYCFKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHG 169 L F F L + I + + +P+ + + G + ++ Sbjct: 101 MLKISESHAKFDMIFHELSSKESVLIYEDDKVCVHTIPLTHRVYTNGYLFTEKEKPRKLN 160 Query: 170 RISSLGF-----------------------------------RFGNVAYCTDVNAFPAES 194 ++ G+ + + A+C+D + P Sbjct: 161 MLNISGYPEIDKANYLNIKAGRNVELASGEIILNSELTEMPSKALSFAFCSDTSYKPD-I 219 Query: 195 LEKLQNLDFL------IIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + ++N+D L + D + H + E+ + + N ++ H Sbjct: 220 VPIIKNVDLLYHEATFLADRQDLAKKTKHSTSLEAAQIAKDANVGQLVIGH 270 >gi|193077819|gb|ABO12693.2| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Acinetobacter baumannii ATCC 17978] Length = 324 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP +T S V + +++D G Sbjct: 2 LHFTFLGT--SSGVPTLT---------------RNVSGL--AVRNSKNKDWILIDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLSLQNLIAICITHVHGDHCYGL 72 >gi|57640670|ref|YP_183148.1| metallo-beta-lactamase superfamily hydrolase [Thermococcus kodakarensis KOD1] gi|57158994|dbj|BAD84924.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus kodakarensis KOD1] Length = 270 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 53/151 (35%), Gaps = 27/151 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGL 95 S + R V+VDTG D + + L ++ SIDA+ TH H DH GI L Sbjct: 24 SALVEHNGHR-----VLVDTGTDGRVLLNNIRELGVELDSIDALFITHGHYDHTGGIAEL 78 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + P+DVYA P F R I E + + Sbjct: 79 L---KARSEPLDVYAHP-------GIFARRIALKPRRREIGIPFTRK-ELESLGAVFHLS 127 Query: 156 GGVIEAIPILQQHGRIS------SLGFRFGN 180 E +P G+I ++G+ + Sbjct: 128 EKPFEFLPGFISSGKIERKTWDRAVGYLVED 158 >gi|332181029|gb|AEE16717.1| Ribonuclease Z [Treponema brennaborense DSM 12168] Length = 308 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 78/266 (29%), Gaps = 60/266 (22%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P R +S+ + R + + D G + + R + I+A+ +H H Sbjct: 10 CGGMMPLPYRHLTSVLLRRDGDL-----FLFDGGEGTQVSLRRLNLKWKKINAIFVSHTH 64 Query: 86 ADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKH-------LFESFRY----------CF 126 ADH+ GI GL + + P+ +Y P ++ L Y C Sbjct: 65 ADHVTGIPGLMMLSAQVDRDEPLYIYGPPKIAEYVESNRKVLDMYINYPVVVKEITAPCI 124 Query: 127 KALDDRTYPPIVNP--------IVIENNDVPICMKSAGGVIEAIP-------------IL 165 D Y +E D P +P ++ Sbjct: 125 VHEGDGFYIRAFPLQHTKTCVGYTLEELDRPGEFNPEAARALNVPCGPLWSKLQTGENVV 184 Query: 166 QQHGRI----SSLGFR--FGNVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGL 213 GR LG + +Y TD P+ + E + D LI D Sbjct: 185 ASDGRTVRPDQVLGAKRPGRKFSYVTDSLYLPSIAKEV-RGSDLLICEGMFADDVQDQAR 243 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H + ++ K L H Sbjct: 244 EKKHMTARQAATIARDAGVKKMGLIH 269 >gi|15004751|ref|NP_149211.1| sulphohydrolase/glycosulfatase, Zn-dependent hydrolase [Clostridium acetobutylicum ATCC 824] gi|14994363|gb|AAK76793.1|AE001438_46 Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase [Clostridium acetobutylicum ATCC 824] gi|325511194|gb|ADZ22829.1| Sulfohydrolase/Glycosulfatase, Zn-dependent hydrolase [Clostridium acetobutylicum EA 2018] Length = 248 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 91/283 (32%), Gaps = 55/283 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG W +N N S+ I N +I+D G Sbjct: 2 LKITFLGT----------NGW---FDSNTGNT---PSVLIEH-----RNYYIILDAGNGI 40 Query: 65 YMQVLREQVLSIDAV--LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 LR + S V +H H DHI G+ L + I V P L F Sbjct: 41 SK--LRNCISSDKPVYLFLSHFHLDHISGLHTLPLNKFSKGLYIIV---PKGGTKLINQF 95 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 + + P + + C K +A + H LG R Sbjct: 96 VNVPFTVPIKKLP-------FKTEIIEACNKLNFLPFKATFLPLVHSSY-VLGIRLEIDS 147 Query: 180 -NVAYCTDVNA-FPAESLEKLQNLDFLIIDALKNGLH----SSHFSLSESLKKIELINPK 233 ++YCTD + F A +L +N D LI + L S H + + K + K Sbjct: 148 KTISYCTDTSYCFNAITLA--KNADLLISECSMKPLGTDDASVHLNPELASKIAKEAGAK 205 Query: 234 NAILTHMH----VDLD----YDMVLKSTPSRVVPAFDGMQFSS 268 +L H + LD ++ K+ + ++D ++ Sbjct: 206 KLMLIHFDAAKYLTLDDRKKAELAAKTIFNNSYASYDDLELQV 248 >gi|313673790|ref|YP_004051901.1| hypothetical protein Calni_1833 [Calditerrivibrio nitroreducens DSM 19672] gi|312940546|gb|ADR19738.1| hypothetical protein Calni_1833 [Calditerrivibrio nitroreducens DSM 19672] Length = 273 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 33/216 (15%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPI 137 + ++H H DHI G+ LR K ++++ D + + F+ Sbjct: 62 IFFSHLHWDHIIGLPILRS-MYNSKANVNIFVEDKDIFNSPTDFLKELFRPPFFPVSYQN 120 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC----TDVNA---F 190 + I N + G +E + H +L ++ G Y TD F Sbjct: 121 LKAN-INVNFIDYGRSYNFGDLEVSSMQGNHPD-GALIYKIGRNGYTAIYATDYEHSEIF 178 Query: 191 PAESLEKLQNLDFLIIDALK------------NGLHSSHFSLSESLKKIELINPKNAILT 238 + E +N D+++ D + H + ++++ + KN IL Sbjct: 179 DDKLAEFARNADYMLYDTTYLPDDYNGMFDGTPKIGWGHSTYKDAIRIARKADVKNIIL- 237 Query: 239 HMHVDLDYD--------MVLKSTPSRVVPAFDGMQF 266 H + DY + K + A+DG+ Sbjct: 238 -FHHNPDYTDSMIDEMLELSKMEFENTICAYDGLTL 272 >gi|271498588|ref|YP_003331613.1| ribonuclease Z [Dickeya dadantii Ech586] gi|270342143|gb|ACZ74908.1| ribonuclease Z [Dickeya dadantii Ech586] Length = 304 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 88/302 (29%), Gaps = 76/302 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP R + + + R + + D G Sbjct: 1 MELIFLGTNA--GVPT--------------KERNVTGIALDLHGIRPAF--WLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAA----PDC 114 Q+LR + ++ + TH H DH+ G+ GL + + P+ +Y Sbjct: 43 QHQILRTPIKPGKLEKIFITHLHGDHLFGLPGL--LCSRSMAGVETPLTLYGPTGLKTFV 100 Query: 115 MKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIEAIP------- 163 L S + L+ P + + +++ + G IE +P Sbjct: 101 ETALTLSGSWLTYPLEVVEIVPGTVFEDHQFRVTAHELSHTLYCVGYRIEELPKPGALDV 160 Query: 164 ----------------------ILQQHGRISS------LGFRFGNVAYCTDVNAFPAESL 195 + GR+ + G ++A D P L Sbjct: 161 EKLAAQGVKPGAYFQQLKRGETVTLDDGRVLNGWDYLGPGLPGKSLAIFGDTRPTPEA-L 219 Query: 196 EKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + +D ++ +A G H + ++ K I+TH + + Sbjct: 220 KLAAGVDVMVHEATVEGAMAERANERGHSTTLQTAATARDAGAKRLIITHFSARYGREDL 279 Query: 250 LK 251 + Sbjct: 280 ER 281 >gi|167765647|ref|ZP_02437700.1| hypothetical protein CLOSS21_00131 [Clostridium sp. SS2/1] gi|167712693|gb|EDS23272.1| hypothetical protein CLOSS21_00131 [Clostridium sp. SS2/1] gi|291558956|emb|CBL37756.1| RNAse Z [butyrate-producing bacterium SSC/2] Length = 304 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 57/255 (22%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++ R + ++++D G + + V +DA+ +TH HADHI G+ GL Sbjct: 20 LTACMTRFNGHSLLIDCGEGTQVGIKERGWSVKPLDAICFTHFHADHISGLPGLLLTLGN 79 Query: 102 QKRP-----IDVYAAPDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 +R I + L F F L+++ + ++ IE V Sbjct: 80 AERTEPLLIIGPKGVERVVNSLRVIAPELPFPIEFYELNEKEHVIEMDGYKIEAFYVKHN 139 Query: 152 MKSAGGVIEAIP----------------------------ILQQHGRISSLGFRFG---- 179 + G + IP + + GR+ + G Sbjct: 140 VPCYGYNM-IIPRAGKFDPVKAKENDIPMKYWNRLQKGETVTSEDGRVLTSDMILGSPRP 198 Query: 180 --NVAYCTDVNAFPAESL-EKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIEL 229 + YCTD P +++ E +N D I + + K H + E+ + Sbjct: 199 GIKLTYCTDTR--PVQTISEHAKNADLFICEGMYGEEGKEKKAREYKHMTFYEAAHLAKE 256 Query: 230 INPKNAILTHMHVDL 244 + K LTH L Sbjct: 257 ADVKQMWLTHYSPSL 271 >gi|29840644|ref|NP_829750.1| metal dependent hydrolase, putative [Chlamydophila caviae GPIC] gi|29834994|gb|AAP05628.1| metal dependent hydrolase, putative [Chlamydophila caviae GPIC] Length = 262 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 55/217 (25%) Query: 56 VIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G Q + +LS++ + +H H+DHI GI + + PI Sbjct: 25 ILIDLG--ISKQCVTHGLLSMNVHPEDIQGIFISHEHSDHISGI---KSFVKTYNTPI-- 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + + + + ++ H Sbjct: 78 ICNLETARSICQFLD-----------------VRPNFKIFSTGTTFSFYDLKIQTFNVPH 120 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------LKNGLH 214 I +GF F + +CTD+ + + +L + D+L+I+A + ++ Sbjct: 121 DAIDPVGFVFHYRDEKLGFCTDLGWVTSWVVHELYDCDYLLIEANHDPELVQQSSRPDIY 180 Query: 215 SS-------HFSLSESLKKIELI---NPKNAILTHMH 241 H S E + ++ I K L H+ Sbjct: 181 KKRVLSKLGHISNHECGELLQKILTPKIKKIYLAHLS 217 >gi|194386004|dbj|BAG65377.1| unnamed protein product [Homo sapiens] Length = 624 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 276 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 315 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 316 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLPSIL-LQRERALASLGKPLHPL 374 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L + C + L + P P + ++ E Sbjct: 375 LVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCLQEGAEISSPAVERLISSLLRTCDLEE 434 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 435 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLED 489 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y V +P +V AFD Sbjct: 490 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKVPLFSPNFSEKVGVAFDH 547 Query: 264 MQF 266 M+ Sbjct: 548 MKV 550 >gi|149194844|ref|ZP_01871938.1| ribonuclease Z [Caminibacter mediatlanticus TB-2] gi|149135003|gb|EDM23485.1| ribonuclease Z [Caminibacter mediatlanticus TB-2] Length = 306 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 55/181 (30%), Gaps = 38/181 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG S G P R S L + ++ G + D G Sbjct: 1 MKFLFLGT--SAG--------------RPTKTRNVSGLVVEFENDNG---WYLFDCGEAT 41 Query: 65 YMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----PIDVYAAPDCMKHL 118 Q+L+ + + ++ TH H DH +G+ GL K P+ +YA + + Sbjct: 42 QHQILKTTYSLNKLKSIFITHLHGDHCYGLFGL--ITTKMMEKSSSPLKIYAPRGLKEMI 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F+ L IE ++ + + H I S + Sbjct: 100 ESCVDIRFEHLG----------YEIEFIEIFGGFEEEFDKFSIKVLPLIHS-IESYAYFI 148 Query: 179 G 179 Sbjct: 149 K 149 >gi|262372438|ref|ZP_06065717.1| ribonuclease Z [Acinetobacter junii SH205] gi|262312463|gb|EEY93548.1| ribonuclease Z [Acinetobacter junii SH205] Length = 320 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP +T S + + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLT---------------RNVSAL--AIRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLSLQNLVAICITHVHGDHCYGL 72 >gi|229085995|ref|ZP_04218217.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] gi|228697306|gb|EEL50069.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] Length = 556 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN VI+D G F + L E + A++ TH H DHI GI + Sbjct: 29 SNDIVIIDCGNKFPDESLLGIDLIIPDIAYLVENKDKVKALIVTHGHEDHIGGI----PF 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLK K + VYA + + L + I I +N G Sbjct: 85 FLK-KLNVPVYATRFTLGLIE-------IKLKEHKLLGESELIEINSNS-----NLTIGG 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F GN+ + D Sbjct: 132 ISVSFFKVTHSIPDCLGIVFHTPEGNIVHTGDFK 165 >gi|195341087|ref|XP_002037143.1| GM12754 [Drosophila sechellia] gi|194131259|gb|EDW53302.1| GM12754 [Drosophila sechellia] Length = 743 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|260892600|ref|YP_003238697.1| beta-lactamase domain protein [Ammonifex degensii KC4] gi|260864741|gb|ACX51847.1| beta-lactamase domain protein [Ammonifex degensii KC4] Length = 270 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 25/208 (12%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 T +++D G + E ++ ++ +H H DH+ G+ L G + ++K Sbjct: 27 DPETAILLDAGTGVARLLEPEIKKRLEPVGELHIVLSHYHLDHVCGLFYLTGVWPRRKVV 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I +P ++ YP + + +E ++V I K + Sbjct: 87 IHAPGSPLVDAEPIKALEKLLSPP---LYPMSLWDLPVEVSEV-IGPKKEIAGLRFRFQR 142 Query: 166 QQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLI-------------IDALKN 211 Q+H S+G R + +AY TD A + + ++ + FL+ ++A Sbjct: 143 QKHPG-GSVGMRVEDTLAYVTDTVA-DPATADFVKGVRFLMHETWLTDEEAEKSVEADGV 200 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 H S + H Sbjct: 201 PAREKHSSAGAVAEIAARAGVGRVAPIH 228 >gi|209548879|ref|YP_002280796.1| beta-lactamase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534635|gb|ACI54570.1| beta-lactamase domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 556 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 47/217 (21%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + VYA+ L + + + P + Sbjct: 80 DHYGALADLWP-----GLNVPVYASGFTAGLLEAKRNFEKARIGEVPVTPFKAGDTINIG 134 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P+ G + G ++ ++ TD Sbjct: 135 PFSIEGVAVNHSIPEPMSLMIRTPV----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 185 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 186 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 222 >gi|89902698|ref|YP_525169.1| beta-lactamase-like protein [Rhodoferax ferrireducens T118] gi|89347435|gb|ABD71638.1| beta-lactamase-like [Rhodoferax ferrireducens T118] Length = 263 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 36/239 (15%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C K+ RT +S I + V++D G + +++ I+ VL TH H D Sbjct: 8 CSGAISKDCRT-TSFLI--------DGDVLIDAGTGVGD-LTPDEMSGIEHVLLTHSHLD 57 Query: 88 HIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIE 144 H+ + + ++ P+ ++A + L + + F D P + Sbjct: 58 HVLALPLMVDAIAARRTTPVQIHALAGTIAALEK---HIFNDVIWPDFARLPTPEAPFVS 114 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN 200 +++ + G + H + ++GF G + D P ++L Sbjct: 115 FHEIQVGQTLQFGRKLVEVLPAVH-TVPAVGFAVTAGNGCWVFTGDTERNP-AFWDRLNQ 172 Query: 201 LDF--LII---------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 L+ L+I D + LH S L++ L I P A ++ + Sbjct: 173 LNVAMLVIETAFSNREKDLAQRSLHLSPHVLADELDCIA---PGAAYPIYITHTKPAET 228 >gi|284054324|ref|ZP_06384534.1| hypothetical protein AplaP_22988 [Arthrospira platensis str. Paraca] gi|291566081|dbj|BAI88353.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 265 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 61/201 (30%), Gaps = 15/201 (7%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 +N +++D G D + L + + +H HADH G+ G+ K Sbjct: 29 NNRKLLIDCGSDLRHSLYQLGWSYRDVTDIYISHIHADHTGGL-EYMGFTTKFDPNCSRP 87 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + ++ + + + + IE G +P + Sbjct: 88 KLYLSQELADLVWNNCLAGSMTSIEDDFATLETYFDIEPISPGSGFTWEGVDFTLVPTIH 147 Query: 167 QHGR---ISSLGFRFGNVAY----CTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHF 218 + + S G F TD P + ++ + + D H Sbjct: 148 IQDKYQDVPSYGLSFSVAGVEVFLTTDTKYCPQQLQGFYESANLIFHDCNTAPVTGGVHA 207 Query: 219 SLSESLKKIELINPKNAILTH 239 E + + I K L H Sbjct: 208 HYQELMTLPDKIKNK-IWLYH 227 >gi|325914912|ref|ZP_08177244.1| hypothetical protein XVE_1120 [Xanthomonas vesicatoria ATCC 35937] gi|325538805|gb|EGD10469.1| hypothetical protein XVE_1120 [Xanthomonas vesicatoria ATCC 35937] Length = 249 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGHLPQAIFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWTGDTRPIPEMLKRYAGDNELIAHDC---GVHGNPSHTGVDD 197 >gi|320536508|ref|ZP_08036539.1| ribonuclease Z [Treponema phagedenis F0421] gi|320146648|gb|EFW38233.1| ribonuclease Z [Treponema phagedenis F0421] Length = 308 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 99/308 (32%), Gaps = 78/308 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG + +P R +S+ + R + + D G + + Sbjct: 7 ILGCGGMMPLP----------------YRHLTSVLLRREGDL-----FLFDAGEGTQVSL 45 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAP------DCMKHL 118 R + I+ + +H HADH+ G+ GL + R +Y P + + + Sbjct: 46 RRLNLRWKKINVIFISHTHADHVTGLPGLLMLSSQVDRDDPLYIIGPPKIAEYVETSRRV 105 Query: 119 FESF-RY--------------------------------CFKALDDRTYPPIVNPIVIEN 145 + + Y L++ P I NP + Sbjct: 106 LDMYINYEIIIKEITEPGVVYEQEDFHVRAFWLDHTKPCLGYTLEEFPRPGIFNPEAAQQ 165 Query: 146 NDV---PICMKSAGGVIEAIPILQQHGRISSLG-FRFGN-VAYCTDVNAFPAESLEKLQN 200 +V P+ K G ++ +G R G ++ TD P E++++ Sbjct: 166 LNVPCGPLWSKLQSGETVLSADGKEVSPAQVMGAARKGRKFSFVTDTKYLP-SIAEEVKH 224 Query: 201 LDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP 254 DF + + + K+ H + +++ K + K L H + K Sbjct: 225 SDFFVCEGMFEKGMEKDAAEKKHMTCTQAAKIAKDAEVKKMALIHYSPRYTDYELKKILK 284 Query: 255 S--RVVPA 260 V PA Sbjct: 285 DAQEVFPA 292 >gi|319947212|ref|ZP_08021446.1| ribonuclease Z [Streptococcus australis ATCC 700641] gi|319747260|gb|EFV99519.1| ribonuclease Z [Streptococcus australis ATCC 700641] Length = 309 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKSRNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETSIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPVGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + M++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYQIHFHEFDEGSLGKIMETDKFTVYAEALDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRI 154 >gi|193205216|ref|NP_001122663.1| hypothetical protein Y53F4B.39 [Caenorhabditis elegans] gi|148879409|emb|CAN99706.1| C. elegans protein Y53F4B.39b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 329 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 54 TTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VDTG VL I+ ++ TH H DH+ GID + + K+ I Sbjct: 77 KKILVDTGEPNVTEYISALKSVLASTNSHIEYIVITHWHGDHVGGIDNITDE-ILDKKKI 135 Query: 107 DVYAAPDCMKHLFESFRYC 125 +Y E F Y Sbjct: 136 PIYKMKRDKDEGVERFHYV 154 >gi|260554454|ref|ZP_05826675.1| ribonuclease Z [Acinetobacter baumannii ATCC 19606] gi|260410996|gb|EEX04293.1| ribonuclease Z [Acinetobacter baumannii ATCC 19606] Length = 318 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQARLSLQNLIAICITHVHGDHCYGL 72 >gi|228476927|ref|ZP_04061572.1| ribonuclease Z [Streptococcus salivarius SK126] gi|228251501|gb|EEK10646.1| ribonuclease Z [Streptococcus salivarius SK126] Length = 309 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKARNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + +++ ++VY Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L S P V+ I+ + + + M++ + A + I + Sbjct: 103 MTSLRTS---------GTRLPYHVHFKEIDEHKLGLVMENDKFAVYADKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|161506709|ref|YP_001576659.1| hypothetical protein lhv_0099 [Lactobacillus helveticus DPC 4571] gi|160347698|gb|ABX26372.1| hypothetical protein lhv_0099 [Lactobacillus helveticus DPC 4571] gi|323465652|gb|ADX69339.1| Metallo-beta-lactamase superfamily protein [Lactobacillus helveticus H10] Length = 265 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 55/241 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + ++VD G D + ID +H H DH G+ G ++ Sbjct: 24 ILMDAGLSGKKTKQLLVDVGVD---------INDIDMAFLSHDHTDHSGGL----GVLMR 70 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ID +A ++L ++ P IE G ++ Sbjct: 71 RYPKIDAFANSGTWQYLLDT--------QKIGKLPAEQMNTIEPGQTK-----TFGDLDV 117 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKN 211 H + F +A+ TD E +++ D +++ L++ Sbjct: 118 TAFATSHDAAQPQYYVFTSGGKRIAFLTDTGYVSEEVEGTIEDADAYMMEFNYDTMMLRD 177 Query: 212 GLHS-----------SHFSLSESL-KKIELINP--KNAILTHMHVD-----LDYDMVLKS 252 G +S H S E+ ++++ P K+ L H L ++ + Sbjct: 178 GPYSWSLKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEYLAHETAKEM 237 Query: 253 T 253 Sbjct: 238 L 238 >gi|257461217|ref|ZP_05626315.1| ribonuclease J [Campylobacter gracilis RM3268] gi|257441591|gb|EEV16736.1| ribonuclease J [Campylobacter gracilis RM3268] Length = 741 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 22/165 (13%) Query: 38 TRSSLKI-----SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 T +S I S E +++ PDF +R+ I +L TH H DHI + Sbjct: 214 TNTSAIIVDVGMSFPEESMLGVDILI---PDF--DYVRKIKNKIKGILITHAHEDHIGAM 268 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP--- 149 YF K+ + +YA P + + F + + P+ + + D Sbjct: 269 ----PYFFKEFQ-FPIYATPLPLGMISNKFEEHGLKAERSYFRPVQKRQLYQIGDFEVEF 323 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 I + + A+ I + G I G F+ + Y TD+N Sbjct: 324 IHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTDLNRL 368 >gi|160892250|ref|ZP_02073253.1| hypothetical protein BACUNI_04714 [Bacteroides uniformis ATCC 8492] gi|156858728|gb|EDO52159.1| hypothetical protein BACUNI_04714 [Bacteroides uniformis ATCC 8492] Length = 304 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 92/299 (30%), Gaps = 87/299 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFPTSQIVNV-----RDKLFMIDCGE 40 Query: 63 DFYMQVLRE--QVLSIDAVLYTHPHADHIHG----------------------------I 92 +Q + + ++ + +H H DH G + Sbjct: 41 GAQLQFRKSHLKFSRLNHIFISHLHGDHCFGLLGLISTLNLLGRTAELHIHSPKGLETLL 100 Query: 93 DGLRGYFLKQ------------KRPIDVYAAPD---CMKHLFESFRYCFKALDDRTYPPI 137 + +F +Q K P+ +Y L C ++ P Sbjct: 101 TPMLDFFNRQMTYKVLFHEFDTKEPMQIYEDRSLTVTTIPLRHRMPCCGFLFAEKRRPNH 160 Query: 138 VNPIVIENNDVPICM--KSAGGVIEAIPILQQHGRISSLGFR------FGNVAYCTDVNA 189 + +++ VP+ + G P G+ S + AYC+D Sbjct: 161 IIREMVDFYQVPVYELNRIKNGADYVTP----EGKTVSNNLLTRPSAPSRSYAYCSDTIY 216 Query: 190 FPAESLEKLQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P +E+++ +D L DA + + H + +++ + K ++ H Sbjct: 217 LP-SIVEQIKGVDLLFHEATFANEDAPRAKE-TFHTTAAQAAEIARKAEVKKLLIGHFS 273 >gi|42527456|ref|NP_972554.1| ribonuclease Z [Treponema denticola ATCC 35405] gi|56749439|sp|Q73LB4|RNZ_TREDE RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41818041|gb|AAS12465.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] Length = 308 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 35/177 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG + +P R +S+ + R + + D G + + Sbjct: 7 ILGCGGMMPLP----------------YRHLTSVLLRREGDL-----FLFDCGEGTQVAL 45 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESFRY 124 R + I+A+ +H HADHI G+ GL + R +Y P +++ S Sbjct: 46 RRLNLRWKRINAIFISHTHADHITGLPGLLMLSSQVDREEPLYIIGPPKVAEYVETS--- 102 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 + +N +I + + + H + +G+ F Sbjct: 103 ------RKVLDMYINYEIIVKEIREPGVVYSTEEFQVRSFWLDHTK-PCMGYTFEEF 152 >gi|34557946|ref|NP_907761.1| response regulator [Wolinella succinogenes DSM 1740] gi|34483664|emb|CAE10661.1| RESPONSE REGULATOR PROTEIN-CheY-like nd an HD-GYP domain [Wolinella succinogenes] Length = 637 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 26/152 (17%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAAPD 113 +V +D G +E+ ++ + TH H DH+ I Y K KRP+ VY + + Sbjct: 28 SVAIDAGNLLRG--FKEEEPLLEKIFLTHAHLDHLVDIPFWLDYHYGKMKRPLCVYGSKE 85 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK----------SAGGVIEAIP 163 +K L E K D +P ++ +++ +C + G +EAI Sbjct: 86 TIKTLRE------KLFDGSLWPSFHEINLLGSSEKALCFEAISAGDRFLLEEGVSLEAIK 139 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFP 191 G SLG+ + + +D P Sbjct: 140 GEHTEG---SLGYIIQKENQAIYFTSDTYDSP 168 >gi|183220413|ref|YP_001838409.1| hypothetical protein LEPBI_I1009 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910527|ref|YP_001962082.1| metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775203|gb|ABZ93504.1| Metal-dependent hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778835|gb|ABZ97133.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 317 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 80/265 (30%), Gaps = 60/265 (22%) Query: 50 RGSNTTVIVDTGPDFY-------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 T ++D G + Q+ + TH H DHI G+ + + Sbjct: 67 DDDGETYVLDMGTGLRNLGDELVSEYFTNQLKKTISFFITHTHWDHIQGLPFFKPIYFPD 126 Query: 103 KRPIDVYAAPDCMKHLFESF-----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + Y+ L + F D T + + + +G Sbjct: 127 FH-LHFYSP---YSDLEKRLHTQQEPEFFPVPLDGTGSAKEFKLFFPGDVLEFP---SGL 179 Query: 158 VIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNL-------DFLI 205 +E P+ G S ++F N + TD F ++ + + D LI Sbjct: 180 KVECYPLKHPGG---SFAYKFTNRAGKIFIFATDA-EFTGADMDLIHDCMPFFADADLLI 235 Query: 206 IDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLD------------- 245 +D + L S H + + S+ KN +LTH + Sbjct: 236 LDT-QYTLDESFSKFDWGHTAYTMSVNCASAWRVKNLVLTH--HEPSYSDEKIYEIYESA 292 Query: 246 --YDMVLKSTPSRVVPAFDGMQFSS 268 + L ++ A +G++F Sbjct: 293 KLHKQQLGEKKLKIHLAREGLRFHL 317 >gi|297581730|ref|ZP_06943652.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534137|gb|EFH72976.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 446 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 KNRR +S+ S R +++D G D + + + A+ Sbjct: 2 AKNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVHAL 61 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L KQ +Y + Sbjct: 62 ILTHAHIDHIGRLPWLLAAGFKQ----PIYCTAATAE 94 >gi|15893655|ref|NP_347004.1| metallobeta-lactamase superfamily hydrolase [Clostridium acetobutylicum ATCC 824] gi|15023212|gb|AAK78344.1|AE007551_3 Metal-dependent hydrolases of the metallobeta-lactamase superfamily [Clostridium acetobutylicum ATCC 824] Length = 167 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 29/171 (16%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 R +S I + +++ ++VD G L + + ++ ++ TH H DHI + Sbjct: 15 RGNNSAFI-----KKNSSMILVDCGGTVFHRIKQLNLLQDIKNL-YIIITHTHPDHIGSL 68 Query: 93 DGLRGYFLKQ--KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 L Y +P +Y D + F D+ ++ +N V + Sbjct: 69 GDLIFYCYYILKFKPTIIYPNKD----IITDFFNIIGVGDEM-------YELVSDNKVNL 117 Query: 151 CMKSAG-GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLE 196 G IE IP G I + GF G V Y D N P ++ + Sbjct: 118 TAPEFGDLNIEFIPASHV-GVIPAYGFLIGMSDNLVYYSGDGNKLPEKNYK 167 >gi|255524246|ref|ZP_05391205.1| beta-lactamase superfamily sulfatase [Clostridium carboxidivorans P7] gi|296185367|ref|ZP_06853777.1| hypothetical protein CLCAR_0790 [Clostridium carboxidivorans P7] gi|255512071|gb|EET88352.1| beta-lactamase superfamily sulfatase [Clostridium carboxidivorans P7] gi|296050201|gb|EFG89625.1| hypothetical protein CLCAR_0790 [Clostridium carboxidivorans P7] Length = 267 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 59/261 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 TILG G+++ V + + ++DTG Sbjct: 3 KLTILGTGSAM-VTKCYNTC---------------------FTLSNDKEHFLIDTGGGNT 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYAA 111 + + +I V +H H DHI GI + ++ + + +YA Sbjct: 41 ILSNLESTNISIDNIHHVFISHSHNDHITGI----IWVIRAVAQKILNESYQNNLYIYAH 96 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + +K + + I N I+ + + K + + Sbjct: 97 KEVIKVIRTICDLLLQKKFTNF---IDNRILFKEIENDSFFKILNWDVNF--FDIGSNKQ 151 Query: 172 SSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIID--ALKNGLH------SSHF 218 GF + + D + + +D+L+ + L + H H Sbjct: 152 LQFGFNLNLENGKTLTFLGD-EPYKDPLFKYAYKVDYLLHEAFCLYSQKHIFKPYEKFHS 210 Query: 219 SLSESLKKIELINPKNAILTH 239 ++ ++ + +N KN IL H Sbjct: 211 TVKDACENASKLNVKNVILYH 231 >gi|227819461|ref|YP_002823432.1| metal dependant beta lactamase [Sinorhizobium fredii NGR234] gi|227338460|gb|ACP22679.1| metal dependant beta lactamase protein [Sinorhizobium fredii NGR234] Length = 276 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 55/178 (30%), Gaps = 21/178 (11%) Query: 46 RVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK- 101 + R +I D G ++ E V D V +TH H DHI G+ + + Sbjct: 33 CIEVRCGAEVLIFDAGSGLREAGLSLMSEGVSEFD-VFFTHTHYDHIIGLPYFKPIYRCS 91 Query: 102 ---QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++ + + E + P I + + P S Sbjct: 92 SAVRFWSGHLHGKMSTAEMINEFM----RPPWFPVGPGICQASLDTVDFRPGETLSPRKD 147 Query: 159 IEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 + + H +G+R VA D P E L+ + D ++ D Sbjct: 148 VTVRTMSLVHPG-GCVGYRVDWGGRAVALIYDHEHEPGILDPELLDFIAGADLMVYDC 204 >gi|153831110|ref|ZP_01983777.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873400|gb|EDL71535.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 460 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 32 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFSLGHVDALILTHAHIDHIGRLPWL 91 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 KQ +Y + Sbjct: 92 LAAGFKQ----PIYCTAATAE 108 >gi|302338444|ref|YP_003803650.1| ribonuclease Z [Spirochaeta smaragdinae DSM 11293] gi|301635629|gb|ADK81056.1| ribonuclease Z [Spirochaeta smaragdinae DSM 11293] Length = 309 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 82/257 (31%), Gaps = 65/257 (25%) Query: 40 SSLKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S + R + + D G LR + I A+ +H HADH+ G+ G+ Sbjct: 22 TSALLRRDGDL-----FLFDCGEGTQVSLRKLNLRWK--KISAIFISHTHADHVTGLPGI 74 Query: 96 RGY--FLKQKRPIDVYAAP------DCMKHLFESF--------------------RYCFK 127 + ++ P+ + P + + + + + Y + Sbjct: 75 MMLSSQVDREEPLTIIGPPKIKEYVETARSVLDMYINYEVIIKEINAPCEVYRGEGYAVR 134 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI--PI---LQQHGRISS--------- 173 A P V ++ E+ I + P+ LQQ G + + Sbjct: 135 AFPLLHSKPCVGYVLEEDTRPGIFHPERAAELGVPRGPLWSRLQQGGVVQASDGTSVFPE 194 Query: 174 --LGF-RFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSES 223 +G R G AY TD P + + D LI + + ++ H + ++ Sbjct: 195 QVMGDKRSGRKFAYVTDTKYIPE-IASHVSDSDLLICEGMFLSDLEESAAEKKHLTAKQA 253 Query: 224 LKKIELI-NPKNAILTH 239 + K L H Sbjct: 254 ATIAKDAGGIKKMGLIH 270 >gi|225442543|ref|XP_002278956.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 951 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 86/325 (26%), Gaps = 106/325 (32%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ +LG G+S P R +S+ I+ S ++++D G Sbjct: 584 REDMEIVLLGTGSSQ----------------PSKYRNVTSIYINLFS----KGSLLLDCG 623 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV----- 108 Q+ R V + + +H HADH G+ + + + Sbjct: 624 EGTLGQLKRRFSVEGADNAVRGLRCIWISHIHADHHAGLARILTLRRDLLKGVPHEPLLV 683 Query: 109 --------YAAPD---------------CMKHLFESFRYCFKALDDRTYPPIV------- 138 Y + +F F+ + + P + Sbjct: 684 IGPRQLKRYLDAYQKLEDLDMQFLDCRHTTEVSLNAFECSFETNKEHSSPEVELMNQNID 743 Query: 139 ---------------NPIVIENNDVPICM------------KSAGGVIEAIPILQQHGRI 171 P ++ V + A + Q G + Sbjct: 744 SSLFAKGSRMQSYWKRPGSPVDHSVAFPILKNLKKVLCEAGLEALISFPVVHCPQAFGVV 803 Query: 172 SSLGFRFGNV---------AYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 R +V Y D P +E + LI +A + + + Sbjct: 804 LKASERINSVGKVIPGWKIVYSGDTRPCPEL-IEAARGATVLIHEATFEEGMVDEAIARN 862 Query: 217 HFSLSESLKKIELINPKNAILTHMH 241 H + +E+++ ILTH Sbjct: 863 HSTTNEAIEVGNSAGAYRIILTHFS 887 >gi|16125428|ref|NP_419992.1| ribonuclease Z [Caulobacter crescentus CB15] gi|13422498|gb|AAK23160.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] Length = 317 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 28/184 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR----P 105 +VD+G +L + + AV TH H+DHI + L P Sbjct: 34 GKDLFVVDSGSGSTRNLLLMNMPPPRVSAVFITHYHSDHIADLGEL-MLQRWAGGASKTP 92 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDD----RTYPPIVNPIVIENNDVPI----------C 151 VY ++ + + F + + P + P Sbjct: 93 TPVYGPQG-LEQVVQGFEQAYTLDRGYRIAHHGEAVAPPSGFGGDPRPFVADPAAPDVLV 151 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 ++ G + A P+ H ++G+RF +V D ++ + D L+ + Sbjct: 152 LEKPGLKVWAFPV-AHHPVEGAVGYRFEYKGRSVVISGDT-GPSERLVKASKGADLLLHE 209 Query: 208 ALKN 211 L Sbjct: 210 GLAP 213 >gi|116511425|ref|YP_808641.1| ribonuclease Z [Lactococcus lactis subsp. cremoris SK11] gi|123025546|sp|Q031A3|RNZ_LACLS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116107079|gb|ABJ72219.1| RNAse Z [Lactococcus lactis subsp. cremoris SK11] Length = 307 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 84/292 (28%), Gaps = 74/292 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N ++ + + ER + D G Sbjct: 1 MEIQFLGTGAGQ-------------PSKSRNT---QAIALKMLDERNEI--WLFDCGEAS 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + + +D+Y Sbjct: 43 QHQILNTAIKPRKITKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDLDLYGPVGIKEFV 102 Query: 115 MKHLF---ESFRY------------CFKALDDRTYPPIVNP-------IVIENNDVPIC- 151 + L Y F+ Y +++ V+E N V Sbjct: 103 LTGLRISGSRLGYRINFHEIDSAGKIFEDDSFEVYTDLLDHTIFCLGYRVVEKNRVGELD 162 Query: 152 ---MKSAGGVIEAIPILQQHGRISSL------------GFRFGNVA-YCTDVNAFPAESL 195 +K AG + + G + + + G + D ++ Sbjct: 163 ANALKEAGLPFGPLFGKIKKGEVVAYDGKTFDPKDYIGADKVGKIVTILGDTRK-TKTAV 221 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 D L+ +A S H + ++ + +LTH+ Sbjct: 222 RLAWQADLLVHEATYEASESKMARAHGHSTTKQAADVAKEAGVNRLLLTHIS 273 >gi|322372782|ref|ZP_08047318.1| ribonuclease Z [Streptococcus sp. C150] gi|321277824|gb|EFX54893.1| ribonuclease Z [Streptococcus sp. C150] Length = 309 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKARNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + +++ ++VY Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L S P V+ I+ + + + M++ + A + I + Sbjct: 103 MTSLRTS---------GTRLPYRVHFTEIDVHKLGLVMENDKFAVYADKLDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|315639328|ref|ZP_07894490.1| metallo-beta-lactamase [Campylobacter upsaliensis JV21] gi|315480654|gb|EFU71296.1| metallo-beta-lactamase [Campylobacter upsaliensis JV21] Length = 655 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 25/159 (15%) Query: 52 SNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N +I+D G F + R+ I ++ TH H DHI + Y Sbjct: 128 NNDAIIIDLGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAV----PY 183 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 F K+ + +YA P + + F + + + P+ + E + I + + Sbjct: 184 FFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRRIYEIGEFEVEWIHITHS 242 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 A+ + + G I G F+ Y TD++ Sbjct: 243 IIDASALAVKTRAGTIIHTGDFKIDQTPIDGYPTDLHRL 281 >gi|306843754|ref|ZP_07476353.1| metallo-beta-lactamase family protein [Brucella sp. BO1] gi|306275945|gb|EFM57658.1| metallo-beta-lactamase family protein [Brucella sp. BO1] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAIATPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|222529916|ref|YP_002573798.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456763|gb|ACM61025.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 821 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 68/219 (31%), Gaps = 67/219 (30%) Query: 45 SRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLR-- 96 S V + +++D+G Q+LRE + +D L +H H DHI + + Sbjct: 15 SCVLIKAGGKNILIDSGIRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLPLIARE 73 Query: 97 ---GYFLKQK---------------------RPIDVYAAPDCMKHLFES----FRYCFKA 128 +F + I +YA + L + F Y F+ Sbjct: 74 YPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFNYTFEP 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ ++ + + I + G++ Y D + Sbjct: 134 IEGIKVTFFPAGHILGASMIFIQTQE------------------------GSILYTGDFS 169 Query: 189 -----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S+ K++ D +I ++ ++ + E Sbjct: 170 ADRQLTVDKASVPKIR-PDVVICESTYGDRLHTNRNFEE 207 >gi|23501704|ref|NP_697831.1| metallo-beta-lactamase family protein [Brucella suis 1330] gi|148559989|ref|YP_001258795.1| metallo-beta-lactamase family protein [Brucella ovis ATCC 25840] gi|225627314|ref|ZP_03785351.1| metallo-beta-lactamase family protein [Brucella ceti str. Cudo] gi|254701585|ref|ZP_05163413.1| metallo-beta-lactamase family protein [Brucella suis bv. 5 str. 513] gi|254706967|ref|ZP_05168795.1| metallo-beta-lactamase family protein [Brucella pinnipedialis M163/99/10] gi|254709925|ref|ZP_05171736.1| metallo-beta-lactamase family protein [Brucella pinnipedialis B2/94] gi|254713926|ref|ZP_05175737.1| metallo-beta-lactamase family protein [Brucella ceti M644/93/1] gi|254717016|ref|ZP_05178827.1| metallo-beta-lactamase family protein [Brucella ceti M13/05/1] gi|254718926|ref|ZP_05180737.1| metallo-beta-lactamase family protein [Brucella sp. 83/13] gi|256031418|ref|ZP_05445032.1| metallo-beta-lactamase family protein [Brucella pinnipedialis M292/94/1] gi|256369249|ref|YP_003106757.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|260168552|ref|ZP_05755363.1| metallo-beta-lactamase family protein [Brucella sp. F5/99] gi|261218823|ref|ZP_05933104.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261314430|ref|ZP_05953627.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261317471|ref|ZP_05956668.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261321678|ref|ZP_05960875.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|261752138|ref|ZP_05995847.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|261758025|ref|ZP_06001734.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|265983913|ref|ZP_06096648.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|265988507|ref|ZP_06101064.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|294852174|ref|ZP_06792847.1| metallo-beta-lactamase [Brucella sp. NVSL 07-0026] gi|306838226|ref|ZP_07471078.1| metallo-beta-lactamase family protein [Brucella sp. NF 2653] gi|23347628|gb|AAN29746.1| metallo-beta-lactamase family protein [Brucella suis 1330] gi|148371246|gb|ABQ61225.1| metallo-beta-lactamase family protein [Brucella ovis ATCC 25840] gi|225617319|gb|EEH14364.1| metallo-beta-lactamase family protein [Brucella ceti str. Cudo] gi|255999409|gb|ACU47808.1| metallo-beta-lactamase family protein [Brucella microti CCM 4915] gi|260923912|gb|EEX90480.1| beta-lactamase domain-containing protein [Brucella ceti M13/05/1] gi|261294368|gb|EEX97864.1| beta-lactamase domain-containing protein [Brucella ceti M644/93/1] gi|261296694|gb|EEY00191.1| beta-lactamase domain-containing protein [Brucella pinnipedialis B2/94] gi|261303456|gb|EEY06953.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738009|gb|EEY26005.1| beta-lactamase domain-containing protein [Brucella sp. F5/99] gi|261741891|gb|EEY29817.1| beta-lactamase domain-containing protein [Brucella suis bv. 5 str. 513] gi|264660704|gb|EEZ30965.1| beta-lactamase domain-containing protein [Brucella pinnipedialis M292/94/1] gi|264662505|gb|EEZ32766.1| beta-lactamase domain-containing protein [Brucella sp. 83/13] gi|294820763|gb|EFG37762.1| metallo-beta-lactamase [Brucella sp. NVSL 07-0026] gi|306406670|gb|EFM62897.1| metallo-beta-lactamase family protein [Brucella sp. NF 2653] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|17537503|ref|NP_497107.1| hypothetical protein Y53F4B.39 [Caenorhabditis elegans] gi|75019446|sp|Q95Q18|LACB2_CAEEL RecName: Full=Beta-lactamase-like protein 2 homolog gi|6434544|emb|CAB61094.1| C. elegans protein Y53F4B.39a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 295 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 54 TTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VDTG VL I+ ++ TH H DH+ GID + + K+ I Sbjct: 43 KKILVDTGEPNVTEYISALKSVLASTNSHIEYIVITHWHGDHVGGIDNITDE-ILDKKKI 101 Query: 107 DVYAAPDCMKHLFESFRYC 125 +Y E F Y Sbjct: 102 PIYKMKRDKDEGVERFHYV 120 >gi|326489322|dbj|BAK01644.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 958 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ T LG G+S P R SS+ I+ ++ G +++D G Sbjct: 606 REDMEITFLGTGSSQ----------------PSKYRNVSSIYINLFAQGG----MLLDCG 645 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 Q+ R E V ++ + +H HADH G+ + Sbjct: 646 EGTLGQLKRRFGVSGADEAVKNLRCIWISHIHADHHTGLARVLAL 690 >gi|302865316|ref|YP_003833953.1| beta-lactamase domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302568175|gb|ADL44377.1| beta-lactamase domain protein [Micromonospora aurantiaca ATCC 27029] Length = 209 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 29/165 (17%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DAVL TH H DH+ + +RP+ V+ L ++ ++ Sbjct: 37 DAVLITHEHPDHV----DVAALTRALERRPVPVHGPASLAGVLGDAVEALVTVEPGQS-- 90 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAES 194 + P+ + I I ++G+ F +V Y D P + Sbjct: 91 -------LTVAGTPVRTYGGQHAVIHPDIPV----IQNIGYLFADVVYHPGDALFVPDDV 139 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +D L +H+ SE L I + P+ A H Sbjct: 140 Q----------VDTLFAPIHAPWSKFSEVLDFIRAVAPRRAYALH 174 >gi|255523999|ref|ZP_05390961.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296186858|ref|ZP_06855259.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255512286|gb|EET88564.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296048572|gb|EFG88005.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 261 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 50/237 (21%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +N V+VD G + ++ + E ID + TH H DH G+ L +K Sbjct: 18 SSNNAKVLVDAGLPGKSIEKALERIGENPTDIDGIFVTHEHIDHTKGVG-----VLSRKY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y + ++ ++ I D+ I Sbjct: 73 DIPIYTNAPTWDSMSKTIGKI-----KDKNIKVLQSNCISIKDMDI-----------TSY 116 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + G+ TD+ F E + L++ D +++++ LK G + Sbjct: 117 KISHDAAAPSGYSLSCEDKKACIATDLGFFSTEIRKTLEDADVVLLESNHDVEMLKFGPY 176 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 H S + K I I K IL H+ +Y + T + Sbjct: 177 PYNLKKRILSNIGHLSNDDCGKAIVNIVNSKFKKIILGHLSKTNNYPELAYQTVLNI 233 >gi|168335495|ref|ZP_02693579.1| ribonuclease Z [Epulopiscium sp. 'N.t. morphotype B'] Length = 302 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 85/296 (28%), Gaps = 105/296 (35%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDG 94 R ++L I V++D G + + + SID + TH H DHI+GI G Sbjct: 18 RYLTALLIRY-----GGKKVLIDCGEGTQVTMKIVGWGFKSIDIICITHYHGDHINGIAG 72 Query: 95 LRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + R P+ + P + I+N ++I D+P + Sbjct: 73 VIMAMANSVRTEPLTIIGPPGLHR--------------------ILNGLLIICTDLPFKL 112 Query: 153 K----------SAGGVIEAIPILQQHGRISSLGFRFG----------------------- 179 K G I H +I LG+ Sbjct: 113 KILETEIATNTIEIGEFFITTIPLNH-KIPCLGYSIEIKRPAKFMLDKAEFNKVPQPAWR 171 Query: 180 ----------------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDA--- 208 V+Y TD + + + + D + ++ Sbjct: 172 YLQLGESVQIDGKTYTPDMVLGPPRKGFKVSYVTD-SRPSDKIVSAVAXSDLFVCESMYM 230 Query: 209 ----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPA 260 L+ H E+ + + KN LTH Y + ++ V PA Sbjct: 231 DYPDLEQVKKYKHMLGVEAAQMAKEARVKNLWLTH------YSPAVPTSSLNVAPA 280 >gi|41408318|ref|NP_961154.1| ribonuclease Z [Mycobacterium avium subsp. paratuberculosis K-10] gi|56749440|sp|Q73XT9|RNZ_MYCPA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41396674|gb|AAS04537.1| hypothetical protein MAP_2220 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 280 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 56/189 (29%), Gaps = 39/189 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P R S + + +VD G Sbjct: 2 IEVTLLGTGS----PI------------PDPNRAGPSTLVRAGGQ-----VFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDG-----LRGYFLKQKRPIDVYAAP----- 112 + A+L TH H+DH+ + F P+ + P Sbjct: 41 LQRAAAGGVGAAGLSALLLTHLHSDHVGDLGDVLITRWISTFTPDPVPLPIIGPPGTAEL 100 Query: 113 --DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L Y D PP V+ E+ D P+ + G I P + Sbjct: 101 VAATLNALRHDIGYRIAHHADLNAPPAVDVR--EHTDGPVWDRD-GVSIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG 179 ++GFR Sbjct: 157 APTIGFRVE 165 >gi|322516620|ref|ZP_08069534.1| ribonuclease Z [Streptococcus vestibularis ATCC 49124] gi|322124890|gb|EFX96314.1| ribonuclease Z [Streptococcus vestibularis ATCC 49124] Length = 309 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKARNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + +++ ++VY Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L S P V+ I+ + + + M+ + A + I + Sbjct: 103 MTSLRTS---------GTRLPYHVHFKEIDEHKLGLVMEDDKFAVYADKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|306841945|ref|ZP_07474623.1| metallo-beta-lactamase family protein [Brucella sp. BO2] gi|306287978|gb|EFM59386.1| metallo-beta-lactamase family protein [Brucella sp. BO2] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|169795341|ref|YP_001713134.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Acinetobacter baumannii AYE] gi|213158673|ref|YP_002319971.1| ribonuclease Z [Acinetobacter baumannii AB0057] gi|215482875|ref|YP_002325078.1| Ribonuclease Z [Acinetobacter baumannii AB307-0294] gi|294836927|ref|ZP_06781610.1| Ribonuclease Z [Acinetobacter sp. 6013113] gi|294858226|ref|ZP_06795995.1| Ribonuclease Z [Acinetobacter sp. 6013150] gi|301347162|ref|ZP_07227903.1| Ribonuclease Z [Acinetobacter baumannii AB056] gi|301511969|ref|ZP_07237206.1| Ribonuclease Z [Acinetobacter baumannii AB058] gi|301595649|ref|ZP_07240657.1| Ribonuclease Z [Acinetobacter baumannii AB059] gi|169148268|emb|CAM86133.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Acinetobacter baumannii AYE] gi|213057833|gb|ACJ42735.1| ribonuclease Z [Acinetobacter baumannii AB0057] gi|213986249|gb|ACJ56548.1| Ribonuclease Z [Acinetobacter baumannii AB307-0294] Length = 318 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQARLSLQNLIAICITHVHGDHCYGL 72 >gi|163843090|ref|YP_001627494.1| hypothetical protein BSUIS_A0856 [Brucella suis ATCC 23445] gi|163673813|gb|ABY37924.1| Hypothetical protein BSUIS_A0856 [Brucella suis ATCC 23445] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|261749659|ref|YP_003257345.1| ribonuclease Z [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497752|gb|ACX84202.1| ribonuclease Z [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 307 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D TILG C + P + ++ + ++D G Sbjct: 2 DKTSLTILG----------------CHSSIPTEKFYPTAQILEMKG-----AFFLIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 +Q+ + ++ I + +H H DH G+ GL F R + +YA + + Sbjct: 41 GTQVQLRKAKIKFNKIVHIFISHLHGDHFFGLIGLLSTFHLLGREKSVYIYAPKGLKEII 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F++ + L ++ I + + + M++ + IP+ RI + GF F Sbjct: 101 DVHFKWSYTRLKF-----CIDHIELSSKKLEKIMETEKVEVYTIPLKH---RIYTNGFLF 152 Query: 179 G 179 Sbjct: 153 K 153 >gi|256060929|ref|ZP_05451087.1| metallo-beta-lactamase family protein [Brucella neotomae 5K33] gi|261324929|ref|ZP_05964126.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] gi|261300909|gb|EEY04406.1| beta-lactamase domain-containing protein [Brucella neotomae 5K33] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|167522291|ref|XP_001745483.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775832|gb|EDQ89454.1| predicted protein [Monosiga brevicollis MX1] Length = 368 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 57/186 (30%), Gaps = 41/186 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG A PT +N S V + ++D G Sbjct: 55 SRLTFLGTSA-------GC------PTKQRN-------VTSHVLTFSNGRQWMLDCGEAT 94 Query: 65 YMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPD 113 Q+L + +DA+L TH HADH+ G+ GL I Sbjct: 95 QHQMLHCPEVKGSRLDAILITHLHADHVLGLPGLLATLSMAGGRSESQPLKVIGPTGLRR 154 Query: 114 CMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 ++ + E +F Y +D P + + P + A I+ + Sbjct: 155 LIETILELTFSYLTFPIDYHELDP-LETHELGPMFGPDTPELAAYPIKHA--------VP 205 Query: 173 SLGFRF 178 LG+ Sbjct: 206 CLGYVI 211 >gi|313890135|ref|ZP_07823770.1| ribonuclease Z [Streptococcus pseudoporcinus SPIN 20026] gi|313121496|gb|EFR44600.1| ribonuclease Z [Streptococcus pseudoporcinus SPIN 20026] Length = 310 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 57/180 (31%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLVLKLLDEINEI--WMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I+ + TH H DHI G+ G R + +++ I ++ + Sbjct: 43 QRQILETTIKPRKIEKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDIAIFGPLGIKSFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + P ++ + + + ++ H I LG+R Sbjct: 103 QNSLS-----VSGSRLPYKIHYHELTEDKLGKIFET--DKFTVYAERLAH-TIFCLGYRV 154 >gi|312862724|ref|ZP_07722964.1| ribonuclease Z [Streptococcus vestibularis F0396] gi|311101584|gb|EFQ59787.1| ribonuclease Z [Streptococcus vestibularis F0396] Length = 309 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKARNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + +++ ++VY Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M L S P V+ I+ + + + M+ + A + I + Sbjct: 103 MTSLRTS---------GTRLPYHVHFKEIDEHKLGLVMEDDKFAVYADKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|194906654|ref|XP_001981406.1| GG11633 [Drosophila erecta] gi|190656044|gb|EDV53276.1| GG11633 [Drosophila erecta] Length = 756 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|166154558|ref|YP_001654676.1| ribonuclease Z [Chlamydia trachomatis 434/Bu] gi|166155433|ref|YP_001653688.1| ribonuclease Z [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335821|ref|ZP_07224065.1| ribonuclease Z [Chlamydia trachomatis L2tet1] gi|254808620|sp|B0B7R5|RNZ_CHLT2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808621|sp|B0BBY0|RNZ_CHLTB RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|165930546|emb|CAP04041.1| Ribonuclease Z [Chlamydia trachomatis 434/Bu] gi|165931421|emb|CAP06995.1| Ribonuclease Z [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 304 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 83/288 (28%), Gaps = 78/288 (27%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG C P R + + R + ++ D G Sbjct: 6 LTILG----------------CSSQQPTRHRNHGAYLL-----RWNGEGLLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMKHL-FES 121 Q + + + + +H H DH G+ + L + PI Y K+ Sbjct: 45 QFIYANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDRVSHPIHCYYPASGKKYFDRLR 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENND----------------------------VPICMK 153 + + PI ++E+ +P +K Sbjct: 105 YSTIYHETIKVIEHPIDREGIVEDFGNFRIESRQLDHLVDTLGWRITEPDTTKFIPEKIK 164 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN-------------AFP-AESLEKLQ 199 +AG + L GR+ + + DV+ + P ++ + Sbjct: 165 AAGLKGPIMQELINKGRVKVN----DTIVHLDDVSYTRKGDSIAVVADSLPCQAIVDLAR 220 Query: 200 NLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 N L+ ++ H H + ++ ++ + + ILTH Sbjct: 221 NARILLCESTYLEEHSHLAKSHYHMTAKQAAEQAKRAEVQQLILTHFS 268 >gi|62859611|ref|NP_001017028.1| elaC homolog 1 [Xenopus (Silurana) tropicalis] gi|89269091|emb|CAJ81938.1| elac1 (prov) [Xenopus (Silurana) tropicalis] Length = 363 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 62/381 (16%), Positives = 102/381 (26%), Gaps = 136/381 (35%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G++ P C R S++ E + D G Sbjct: 2 SMDVTFLGTGSAYPSP--------C--------RGASAVVFRTEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q +R + I + TH H DH+ G+ L+ K+ +D+Y Sbjct: 41 TQTQFMRSPLKAGRITKIFITHLHGDHMFGLPGFLCTVSLQCGCTPSKQLVDIYGPVGLR 100 Query: 116 KHLFES---------FRY-------------------------------------CFKAL 129 + + S F Y + + Sbjct: 101 EFVQRSLEISHSQLVFPYVVHELVPSPDQCPAEEFKDFSSRGGESCLATEEQGRTIYASP 160 Query: 130 DDRTYPPIVNP-IVIENNDVPICMKSAGGVIE--AIPILQQHGRISSLGFRFGNVAYC-- 184 +D +Y I + ++ + + S G VIE P ++ LG + G V Sbjct: 161 EDGSYELIADEQFTVKAFKLFHRIPSFGFVIEERERPGKLNMQKLKELGIQPGPVCGKLK 220 Query: 185 ---------------TDVNA--FPAESLEKLQNL---------------DFLIIDAL--- 209 +DV P + L + D LI +A Sbjct: 221 LGATITLDNGQKVSPSDVLGDPIPGRKVCILGDCSGVIAVGGAKLCCDADVLIHEATLDD 280 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHMH---------------VDLDYDMVL 250 K H H + + L + +LTH V + Sbjct: 281 SQMDKAKEHG-HSTPKMAADFANLCCARKLVLTHFSQRYKPPGLVTEGDEDVTVLKQQAE 339 Query: 251 KSTP-SRVVPAFDGMQFSSPI 270 + P V A D M + P+ Sbjct: 340 SALPGQHVTLAEDFMTITIPM 360 >gi|255517328|ref|ZP_05385004.1| hypothetical protein CdifQCD-_09491 [Clostridium difficile QCD-97b34] gi|255650434|ref|ZP_05397336.1| hypothetical protein CdifQCD_09644 [Clostridium difficile QCD-37x79] Length = 365 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 32/217 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK 103 + T ++D G + ++ + V I ++ TH HADH+ G+D ++ + ++ Sbjct: 54 QDGKTFTLIDGGDNDDEGLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIEN- 112 Query: 104 RPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+ + + + F P+ N + + + GG Sbjct: 113 ----VFVSNGSAETKSY--RDFINALANKGLSPSVPLENNKFYLEDSYFEVLNTNGGDTT 166 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES-LEKLQNLDFLIIDALKNGLHSSHFS 219 L + + G V + D + L KL+ +D L K H S S Sbjct: 167 NEQSLVL---VYTNG--NDKVLFTGDAEEGTEKEILPKLEKVDLL-----KVAHHGSRSS 216 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S+ + ++ +NP+ A+L + + Sbjct: 217 SSQ--EFLDKVNPEYAVLLVGKGNSYGHPHQETMNKL 251 >gi|254975525|ref|ZP_05271997.1| hypothetical protein CdifQC_09449 [Clostridium difficile QCD-66c26] gi|255092913|ref|ZP_05322391.1| hypothetical protein CdifC_09704 [Clostridium difficile CIP 107932] gi|255314654|ref|ZP_05356237.1| hypothetical protein CdifQCD-7_09905 [Clostridium difficile QCD-76w55] gi|260683546|ref|YP_003214831.1| hypothetical protein CD196_1810 [Clostridium difficile CD196] gi|260687206|ref|YP_003218340.1| hypothetical protein CDR20291_1853 [Clostridium difficile R20291] gi|260209709|emb|CBA63459.1| putative exported protein [Clostridium difficile CD196] gi|260213223|emb|CBE04723.1| putative exported protein [Clostridium difficile R20291] Length = 385 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 32/217 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK 103 + T ++D G + ++ + V I ++ TH HADH+ G+D ++ + ++ Sbjct: 74 QDGKTFTLIDGGDNDDEGLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIEN- 132 Query: 104 RPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+ + + + F P+ N + + + GG Sbjct: 133 ----VFVSNGSAETKSY--RDFINALANKGLSPSVPLENNKFYLEDSYFEVLNTNGGDTT 186 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES-LEKLQNLDFLIIDALKNGLHSSHFS 219 L + + G V + D + L KL+ +D L K H S S Sbjct: 187 NEQSLVL---VYTNG--NDKVLFTGDAEEGTEKEILPKLEKVDLL-----KVAHHGSRSS 236 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S+ + ++ +NP+ A+L + + Sbjct: 237 SSQ--EFLDKVNPEYAVLLVGKGNSYGHPHQETMNKL 271 >gi|169632990|ref|YP_001706726.1| ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Acinetobacter baumannii SDF] gi|169151782|emb|CAP00601.1| Ribonuclease Z (RNase Z) (tRNA 3 endonuclease) [Acinetobacter baumannii] Length = 318 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q R + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQARLSLQNLIAICITHVHGDHCYGL 72 >gi|149052937|gb|EDM04754.1| elaC homolog 2 (E. coli) [Rattus norvegicus] Length = 827 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 104/302 (34%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 477 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 516 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 517 EGTFGQLCRHYGQQIDRVLCNLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 576 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EA 161 V A L + C + L + P P + ++ E Sbjct: 577 VVAPTQLRAWLQQYHNQCQEILHHISMIPAKCLQKGAEVPSPPVERLISLLLETCDLQEF 636 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 637 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 691 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 692 LEEEAVEKTHSTTSQAIGVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 749 Query: 265 QF 266 + Sbjct: 750 KV 751 >gi|126699539|ref|YP_001088436.1| hypothetical protein CD1930 [Clostridium difficile 630] gi|255101059|ref|ZP_05330036.1| hypothetical protein CdifQCD-6_09629 [Clostridium difficile QCD-63q42] gi|255306923|ref|ZP_05351094.1| hypothetical protein CdifA_10072 [Clostridium difficile ATCC 43255] gi|115250976|emb|CAJ68805.1| conserved hypothetical protein [Clostridium difficile] Length = 385 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 32/217 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK 103 + T ++D G + ++ + V I ++ TH HADH+ G+D ++ + ++ Sbjct: 74 QDGKTFTLIDGGDNDDEGLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIEN- 132 Query: 104 RPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+ + + + F P+ N + + + GG Sbjct: 133 ----VFVSNGSAETKSY--RDFINALANKGLSPSVPLENNKFYLEDSYFEVLNTNGGDTT 186 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES-LEKLQNLDFLIIDALKNGLHSSHFS 219 L + + G V + D + L KL+ +D L K H S S Sbjct: 187 NEQSLVL---VYTNG--NDKVLFTGDAEEGTEKEILPKLEKVDLL-----KVAHHGSRSS 236 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S+ + ++ +NP+ A+L + + Sbjct: 237 SSQ--EFLDKVNPEYAVLLVGKGNSYGHPHQETMNKL 271 >gi|260102102|ref|ZP_05752339.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|260084089|gb|EEW68209.1| metallo-beta-lactamase superfamily protein [Lactobacillus helveticus DSM 20075] gi|328466861|gb|EGF37971.1| hypothetical protein AAULH_00604 [Lactobacillus helveticus MTCC 5463] Length = 265 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 55/241 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + ++VD G D + ID +H H DH G+ G ++ Sbjct: 24 ILMDAGLSGKKTKQLLVDVGVD---------INDIDMAFLSHDHTDHSGGL----GVLMR 70 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ID +A ++L ++ P IE G ++ Sbjct: 71 RYPKIDAFANSGTWQYLLDT--------QKIGKLPAEQMNTIEPGQTK-----TFGDLDV 117 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKN 211 H + F +A+ TD E +++ D +++ L++ Sbjct: 118 TAFATSHDAAQPQYYVFTSGGKRIAFLTDTGYVSEEVEGTIEDADAYMMEFNYDTMMLRD 177 Query: 212 GLHS-----------SHFSLSESL-KKIELINP--KNAILTHMHVD-----LDYDMVLKS 252 G +S H S E+ ++++ P K+ L H L ++ + Sbjct: 178 GPYSWSLKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEYLAHETAKEM 237 Query: 253 T 253 Sbjct: 238 L 238 >gi|161618781|ref|YP_001592668.1| hypothetical protein BCAN_A0832 [Brucella canis ATCC 23365] gi|254704132|ref|ZP_05165960.1| hypothetical protein Bsuib36_09414 [Brucella suis bv. 3 str. 686] gi|260566619|ref|ZP_05837089.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261754798|ref|ZP_05998507.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] gi|161335592|gb|ABX61897.1| Hypothetical protein BCAN_A0832 [Brucella canis ATCC 23365] gi|260156137|gb|EEW91217.1| beta-lactamase domain-containing protein [Brucella suis bv. 4 str. 40] gi|261744551|gb|EEY32477.1| beta-lactamase domain-containing protein [Brucella suis bv. 3 str. 686] Length = 558 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|150401557|ref|YP_001325323.1| hypothetical protein Maeo_1134 [Methanococcus aeolicus Nankai-3] gi|150014260|gb|ABR56711.1| conserved hypothetical protein [Methanococcus aeolicus Nankai-3] Length = 270 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 26/233 (11%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDV 108 T + +D GP M L+ +A+ +H H DH + + + I Sbjct: 32 EKTNLHIDPGPGALVRMADLKLIPYYTNAIFISHDHPDHYTDAEVMIEAMTYGMTKNI-- 89 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + ++ Y Y + I I N + IE I +H Sbjct: 90 ---GYIISNISVLNGYEKYENAISKYHQSKSEIHILNPKESANIH----DIELIATPTKH 142 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 G +G R G++ Y +D + + L+ + ++ + H ++ Sbjct: 143 GDPKGIGCRVKTNKGDIGYTSDTELI-EPLKDCFDGVRVLVANVVRKKNNKLKGHLCSND 201 Query: 223 SLKKIELI--NPKNAILTHMHVDL-----DYDMVLKSTPSRVVPAFDGMQFSS 268 + + + P+ ++ H+ V + + + + +T +++PA G++ Sbjct: 202 LIDLLNSMKNKPELVVINHIGVKMTNPIKECEYIKDNTSVKIIPAKIGLKIEL 254 >gi|284165869|ref|YP_003404148.1| KH-domain/beta-lactamase-domain protein [Haloterrigena turkmenica DSM 5511] gi|284015524|gb|ADB61475.1| KH-domain/beta-lactamase-domain protein [Haloterrigena turkmenica DSM 5511] Length = 644 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 60/204 (29%), Gaps = 53/204 (25%) Query: 1 MKD--YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M D Y T LGC C R+S +S T +++ Sbjct: 176 MSDDEYVRITTLGC---------------CREVG------RASFILSTP-----ETRILI 209 Query: 59 DTGPD----------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 D G + L +IDAV+ TH H DH L K + Sbjct: 210 DCGDKPGAEGEVPYLHAPEALGAGPQTIDAVVLTHAHLDHSA----LIPLLFKYGYDGPI 265 Query: 109 YAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 Y + + Y A + PP + V E + C+ G + I + Sbjct: 266 YCTEPTRDLMGLLTLDYLDVAAKEGRAPPYESEQVREA--IKHCIPLEYGDVTDIAPDVK 323 Query: 168 ---HGRISSLG-----FRFGNVAY 183 H LG F G+ Y Sbjct: 324 LTFHNAGHILGSAVSHFHIGDGLY 347 >gi|57505362|ref|ZP_00371291.1| conserved hypothetical protein subfamily [Campylobacter upsaliensis RM3195] gi|57016498|gb|EAL53283.1| conserved hypothetical protein subfamily [Campylobacter upsaliensis RM3195] Length = 655 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 25/159 (15%) Query: 52 SNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N +I+D G F + R+ I ++ TH H DHI + Y Sbjct: 128 NNDAIIIDLGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAV----PY 183 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 F K+ + +YA P + + F + + + P+ + E + I + + Sbjct: 184 FFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRRIYEIGEFEVEWIHITHS 242 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 A+ + + G I G F+ Y TD++ Sbjct: 243 IIDASALAVKTRAGTIIHTGDFKIDQTPIDGYPTDLHRL 281 >gi|325290224|ref|YP_004266405.1| metallo-beta-lactamase superfamily protein [Syntrophobotulus glycolicus DSM 8271] gi|324965625|gb|ADY56404.1| metallo-beta-lactamase superfamily protein [Syntrophobotulus glycolicus DSM 8271] Length = 245 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 34/216 (15%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRG------YFLKQ 102 ++D G Q + + V +H H DH + L+ F + Sbjct: 29 DRGNYLLDCGSGVLSKAWQYITPG--ELKGVFLSHFHQDHKADLGCLQYAMKFALVFGWR 86 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA F F + + + +E + + + + Sbjct: 87 QDRLKIYANKK-----EPHFPELF-YDEYTAGIGVESGDSLEIDGLRVSFQE-------- 132 Query: 163 PILQQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS----S 216 G ++ F +G + Y D+ + + + D L+ + S + Sbjct: 133 --TVHDGYNLAMRFEYGGKVLIYTGDMGPKSELT-DFCRGADLLLGETSLFEEESGMVET 189 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + E E KN ILTH D + + + Sbjct: 190 HMTTKELALLAEKAQAKNLILTHFPHKGDLNRMPRE 225 >gi|293609558|ref|ZP_06691860.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828010|gb|EFF86373.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 325 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP +T S V + +++D G Sbjct: 2 LHFTFLGT--SSGVPTLT---------------RNVSGL--AVRNTKNKDWILIDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLSLQNLVAICITHVHGDHCYGL 72 >gi|257153445|ref|NP_075968.2| zinc phosphodiesterase ELAC protein 2 [Mus musculus] gi|41017687|sp|Q80Y81|RNZ2_MOUSE RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|29477227|gb|AAH48235.1| ElaC homolog 2 (E. coli) [Mus musculus] gi|56206560|emb|CAI24610.1| elaC homolog 2 (E. coli) [Mus musculus] gi|74140254|dbj|BAE33824.1| unnamed protein product [Mus musculus] Length = 831 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 474 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 514 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 573 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 574 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 633 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 634 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 688 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 689 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 746 Query: 265 QF 266 + Sbjct: 747 KV 748 >gi|195503417|ref|XP_002098643.1| GE26465, isoform A [Drosophila yakuba] gi|194184744|gb|EDW98355.1| GE26465, isoform A [Drosophila yakuba] Length = 756 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|12835202|dbj|BAB23185.1| unnamed protein product [Mus musculus] Length = 435 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 78 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 117 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 118 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 177 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 178 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 237 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 238 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 292 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 293 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 350 Query: 265 QF 266 + Sbjct: 351 KV 352 >gi|330836850|ref|YP_004411491.1| beta-lactamase domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748753|gb|AEC02109.1| beta-lactamase domain protein [Spirochaeta coccoides DSM 17374] Length = 304 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 61/231 (26%), Gaps = 59/231 (25%) Query: 51 GSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD G R + ++ V TH H DH GI L + P Sbjct: 53 DGENAILVDCGFSLRELKKRLDNVGVPLEAVRKVFLTHLHPDHACGIG-----VLTRNLP 107 Query: 106 ID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + V P +V E V + G Sbjct: 108 VPLVVGREAVAGET--------VVWSKLRVPEKSVLLVSEGETVDV------GEFSVWGF 153 Query: 165 LQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H S+G+ TD A+ + ++ + D L ++A L G Sbjct: 154 KTTHDSRGSMGWIIDHGRGSRFMVLTDTGAWTEDMAKEALSADVLFLEANYDERMLHCGP 213 Query: 214 HS-----------SHFSLSESLKKIEL----------INP--KNAILTHMH 241 + H S +++ + + P + H+ Sbjct: 214 YPLRLQKRIEGAWGHLSNTQAFDFLRRSGHIVTTQNNLAPRERRVYFIHLS 264 >gi|323456524|gb|EGB12391.1| hypothetical protein AURANDRAFT_3503 [Aureococcus anophagefferens] Length = 353 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 28/124 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG + VP I TR +S S R TT + D G Sbjct: 1 MEVTFLGT--ASCVPSI----------------TRG---VSCTSLRYDGTTWLFDAGEGS 39 Query: 65 YMQVLREQV---LSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPDCMKH 117 +QV R + +DA+ TH H DH G+ GL +K P++V+ + Sbjct: 40 QIQVQRSHLVHPGKVDAIFVTHLHGDHSFGLPGLMCLIGQNRVKGDAPVEVFGPQGLRLY 99 Query: 118 LFES 121 L S Sbjct: 100 LRAS 103 >gi|312141256|ref|YP_004008592.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Rhodococcus equi 103S] gi|311890595|emb|CBH49913.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Rhodococcus equi 103S] Length = 429 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 21/213 (9%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + +++D GPD +R + + +L TH H DH++ L +++ Sbjct: 14 IRGQTAGLIDDAILLDCGPDVPRAAVRAGRSLADVRHLLLTHAHPDHLNPAALLFRSWVR 73 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + RP+DV D + + D + P+V I I + +A + Sbjct: 74 RDRPLDVVGPADALDLCRD----WVGPDDPVRFVPVVPGDRIMLEGYTIRVLAAAHRVFR 129 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL--DFLIID---ALKNGLHSS 216 + G R V + TD P +LE +++ D + ++ + L + Sbjct: 130 DGDSVLYDITGPHGDR---VLWATDTGPLPGSTLEAVRDARFDAVFLEETFGTRTDLGAG 186 Query: 217 HFSL---SESLKKIELINP----KNAILTHMHV 242 H L +L + + + H+ Sbjct: 187 HHDLTTFPRTLAALREAGAVTDTSDVVAVHLSH 219 >gi|145591595|ref|YP_001153597.1| ribonuclease Z [Pyrobaculum arsenaticum DSM 13514] gi|166991501|sp|A4WKM8|RNZ_PYRAR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|145283363|gb|ABP50945.1| RNAse Z [Pyrobaculum arsenaticum DSM 13514] Length = 287 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 81/280 (28%), Gaps = 74/280 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G + VPR R ++ + +++D G Sbjct: 4 LKLVFLGTGGA--VPRAD--------------RMLPAIYLE----DWLGHRILLDAGEGV 43 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGID----------------------------- 93 ++ + V S+ V TH H DH+ G+ Sbjct: 44 QYRLFQIGVAPSSLTLVAVTHMHEDHVLGLPGLVITAKFLGGKVKLLGPRSAHGILSRLG 103 Query: 94 -GLRGYFLKQKRPIDVYAAPDCMKH----LFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + + + + + L Y P +I +V Sbjct: 104 VDVADGYDGGRLRVRCVEVCHTVDACGWLLEWDVGYKLDLKKVEGLPKWALTKLIRGEEV 163 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + G VI + + R+ + Y D P L+ + +D LI +A Sbjct: 164 EVG----GRVIRPEEVADPAHK------RYRRLLYTGDTGPCP-RMLKTVGEVDVLIHEA 212 Query: 209 L------KNGLH-SSHFSLSESLKKIELINPKNAILTHMH 241 N H H +++++++ + + +LTH+ Sbjct: 213 TFADDVDPNKAHEEGHSTVADAVEAAKALRAGVLVLTHIS 252 >gi|222095332|ref|YP_002529392.1| zn-dependent hydrolase [Bacillus cereus Q1] gi|221239390|gb|ACM12100.1| Zn-dependent hydrolase [Bacillus cereus Q1] Length = 557 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 132 IKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFK 165 >gi|239931726|ref|ZP_04688679.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291440095|ref|ZP_06579485.1| cobinamide kinase [Streptomyces ghanaensis ATCC 14672] gi|291342990|gb|EFE69946.1| cobinamide kinase [Streptomyces ghanaensis ATCC 14672] Length = 399 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG GA G+PR AC + R +SL + + +++D P Sbjct: 1 MELILLGTGAPAGLPRPDCPCAACASALGPHARAATSLLV--------DGELLLDLTPGV 52 Query: 65 --YMQVLREQVLSIDAVLYTHPH 85 + + VL +HPH Sbjct: 53 AFAAARAGHALGGVRQVLLSHPH 75 >gi|90410230|ref|ZP_01218247.1| Arylsulfatase [Photobacterium profundum 3TCK] gi|90329583|gb|EAS45840.1| Arylsulfatase [Photobacterium profundum 3TCK] Length = 318 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 28/215 (13%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQ----- 102 + +++D G ++ +D + TH H DH+ + L GYF + Sbjct: 60 GKSKILIDAGAGVFLRFGQSGSRMEELDFLGVTHFHTDHVTDLPALLKGGYFFNRTSTLA 119 Query: 103 ------KRPID---VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 +P Y H ++ Y D V+ ++ V Sbjct: 120 IAGPTGHQPFPSLTAYMDA-LFNHDKGAYAYLNGIYDGSDGLFPVSLQDVDYQKVTSTKV 178 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-A 208 + HG + ++ +R G + D N ++ + D L++ A Sbjct: 179 YEDDGLTIYAKDIPHGDVPTVAYRVESDKGVMVISADQNGRDKSFIDFAKGADILVMPMA 238 Query: 209 LKNGLHS----SHFSLSESLKKIELINPKNAILTH 239 + H + S K + +NPK +L+H Sbjct: 239 IDENADEISSFMHATPSAVGKIAQAVNPKMLVLSH 273 >gi|25028419|ref|NP_738473.1| putative metallo-beta-lactamase superfamily protein [Corynebacterium efficiens YS-314] gi|23493704|dbj|BAC18673.1| putative metallo-beta-lactamase superfamily protein [Corynebacterium efficiens YS-314] Length = 700 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 28/153 (18%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + + ++A++ TH H DHI Sbjct: 158 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IENHLNRVEALVVTHGHEDHIGA 210 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + I + + + + + + P +IE N+ Sbjct: 211 I----PWLLKLRHDIPIIGSRFTLALIAAKCK-----------EHRLRPKLIEVNEQS-- 253 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 G H LG A Sbjct: 254 -NENRGPFNIRFWAVNHSIPDCLGLAIKTPAGL 285 >gi|329926660|ref|ZP_08281071.1| hypothetical protein HMPREF9412_5576 [Paenibacillus sp. HGF5] gi|328939069|gb|EGG35434.1| hypothetical protein HMPREF9412_5576 [Paenibacillus sp. HGF5] Length = 557 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 49/154 (31%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 V++D G F + L + + A++ TH H DHI GI Sbjct: 29 DQDIVVIDCGSKFPDENLPGIDLIVPDFTYLLDNADKVRALVVTHGHEDHIGGIP----- 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ PI VY ++ + L + I+ N G Sbjct: 84 YLLKQLPIPVYGTKLTIELIK-------IKLKEHRILRNSELHTIDANS-----TIQAGA 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I A H +G F GNV + D Sbjct: 132 IHASFFSTSHSIPDCVGIVFQTPEGNVVHTGDFK 165 >gi|13540342|gb|AAK29420.1|AF348157_1 putative prostate cancer susceptibility protein [Mus musculus] gi|148678451|gb|EDL10398.1| elaC homolog 2 (E. coli), isoform CRA_a [Mus musculus] Length = 831 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 474 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 514 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 573 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 574 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 633 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 634 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 688 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 689 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 746 Query: 265 QF 266 + Sbjct: 747 KV 748 >gi|88706594|ref|ZP_01104297.1| metallo-beta-lactamase superfamily protein [Congregibacter litoralis KT71] gi|88699090|gb|EAQ96206.1| metallo-beta-lactamase superfamily protein [Congregibacter litoralis KT71] Length = 267 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 50/206 (24%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T ++VD G R + +DA+L TH H+DH G+ L + I Sbjct: 18 AETCILVDCGFSLRDIQRRAALRGIDLGDLDAILVTHEHSDHASGV-----ATLARHYGI 72 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + D R + + G + Sbjct: 73 PVYLTHGTLASGRVA-----NCPDVRAFNADTQLHI--------------GAFTVQAVTV 113 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSS 216 H + + F TD+ + + + + L+++ L +G + Sbjct: 114 PHDAREPVQYCFEYGGQRAGVLTDLGSVTSHVRSAFNDCNLLLLEFNHDRRLLADGPYPP 173 Query: 217 -----------HFSLSESLKKIELIN 231 H S S++ + + +N Sbjct: 174 ALKRRVGGDWGHLSNSQATELLGQLN 199 >gi|325968328|ref|YP_004244520.1| ribonuclease Z [Vulcanisaeta moutnovskia 768-28] gi|323707531|gb|ADY01018.1| ribonuclease Z [Vulcanisaeta moutnovskia 768-28] Length = 307 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 92/323 (28%), Gaps = 83/323 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG GA G P ++ R ++ + +++D G Sbjct: 3 IKVTFLGTGA--GTP-------------SRD-RYLPAILVE-----DGQRKILLDVGEGI 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR------------------GYFLKQKR 104 ++L V I V TH H DHI G+ GL G K Sbjct: 42 QYRLLEIGVSPLKITHVFITHMHGDHIFGLPGLLATMAMLGREEDLVISGPHGIVNFVKS 101 Query: 105 PIDVYAAPDCMKHL-------------------------FESFRYCFKALDDRTYPPIVN 139 +++ P + + C +L+ RTY N Sbjct: 102 NMEIVGDPPFHVQIYEIEPSEGIKDIINEENFNLQCVLAKHTVPDCAYSLNWRTYIGRFN 161 Query: 140 PIVIENNDVPI--CMKSAGGVIEAI---PILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P VP+ + G + + +++ + + Y D Sbjct: 162 PERARELGVPVKYWKRLHMGEVVVLDDGRVIKPEDVVEVRSSGLVRLVYTGDTAP-SDSV 220 Query: 195 LEKLQNLDFLIIDA--LKNGLHS-----SHFSLSESLKKIELINPKNAILTHMHVDL-DY 246 + ++ LI D+ HS H ++ + +LTH+ D Sbjct: 221 INIARDAQVLIHDSTFSAVEDHSMVWNQGHSRSIDAAEIARKAGVNRLVLTHISNRYSDP 280 Query: 247 DMVLKSTPS---RVVPAFDGMQF 266 +++ V+ A D M Sbjct: 281 ELLAVEASEVFTNVIAARDLMSL 303 >gi|206975012|ref|ZP_03235927.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus H3081.97] gi|206747031|gb|EDZ58423.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus H3081.97] Length = 557 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 132 IKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFK 165 >gi|113478021|ref|YP_724082.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101] gi|110169069|gb|ABG53609.1| beta-lactamase-like [Trichodesmium erythraeum IMS101] Length = 301 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 72/220 (32%), Gaps = 42/220 (19%) Query: 45 SRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V R +I D G +++L+E + + ++H H DHI G +F+ Sbjct: 53 SCVEMRVGEKRLIFDGGTGLRVLGLELLKEMPVEAH-IFFSHTHWDHIQGF----PFFVP 107 Query: 102 QKRPI---DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG- 156 PI +Y A + ES D +P P+ I + + + G Sbjct: 108 AFLPINKFHIYGAIAPDGTTIKESLS------DQMVHPNFPIPLQIMGSQMKFYDFNNGD 161 Query: 157 ----GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA----FPAESLEKLQNLDFL 204 IE I H ++G+R V YC D F L +N D L Sbjct: 162 VIQVDDIEIETISLNHPNF-AIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLL 220 Query: 205 IIDALK----------NGLHSSHFSLSESLKKIELINPKN 234 I DA + H + ++ K Sbjct: 221 IYDATYTNEEYYDVKSPKIGLGHSTWEVGVEIARKAGVKQ 260 >gi|312876444|ref|ZP_07736428.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796802|gb|EFR13147.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 822 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 65/220 (29%), Gaps = 64/220 (29%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGID 93 S + I N +++D+G Q+LRE + +D L +H H DHI + Sbjct: 15 SCVLIKAC-----NKNILIDSGMRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLP 68 Query: 94 GLR-----GYFLKQK---------------------RPIDVYAAPDCMKHLFESFRYCFK 127 + +F + I +YA + L + Y F Sbjct: 69 LIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFN 128 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + IE V I I Q G I Y D Sbjct: 129 YTFE----------PIEGIKVTFFPAGHILGASMIFIKTQEGSIL----------YTGDF 168 Query: 188 N-----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + S+ K++ D +I ++ ++ S E Sbjct: 169 SADRQLTVDKASVPKIR-PDVVICESTYGDRLHTNRSFEE 207 >gi|254513832|ref|ZP_05125893.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] gi|219676075|gb|EED32440.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] Length = 263 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 53/218 (24%) Query: 53 NTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + V+VD G R + S+DA+L TH H+DH G+ L + I Sbjct: 19 QSCVMVDCGFTLKEIQRRAAQRQVDLGSLDAILVTHEHSDHSSGV-----AALARCYHIP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY F + P I + G + Sbjct: 74 VYLTHGT-----------FASGRIGRCPQI--------QVFNGDTQLHIGAFTVRAVTVP 114 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSS- 216 H + + F TD+ + + + + D L+++ L G + + Sbjct: 115 HDAREPVQYCFESAGHRAGVLTDLGSVTSHVRDAFDHCDLLLLEFNHDRQLLAEGPYPAS 174 Query: 217 ----------HFSLSESLKKIELINPKN---AILTHMH 241 H S +++ K + +N + ++ H+ Sbjct: 175 LKRRVGGDWGHLSNAQAAKLLGQLNLQRLEHLVIAHIS 212 >gi|188584156|ref|YP_001927601.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179347654|gb|ACB83066.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 301 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 17/208 (8%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R ++D G + RE + +L++H H DH G+ + + + I Sbjct: 43 RCGERLFVIDAGSGLGAFGRGCRESMPQDIDLLFSHLHLDHTAGLPFFKPVVMGCEHTIH 102 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 Y + ++ F ++ + + I+ IL Sbjct: 103 TYCGNLDGESAEDALGRLFSPPLFPVTLDVLPCTFKHHGFRAGETLTFADGIQVDTILLD 162 Query: 168 HGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDA-LKNGLHS--- 215 H + S G+RF + +D+ N E ++ D L+ D G + Sbjct: 163 HPQ-GSTGYRFDYGGKRLCVISDIEHSANWPDPELCRFVEGADLLVYDGMFTEGEYPCCK 221 Query: 216 --SHFSLSESLKKIELINPKNAILTHMH 241 H + + ++ K + H+H Sbjct: 222 GWGHSTWQKGVELARGAGAKALAIIHLH 249 >gi|72161928|ref|YP_289585.1| ribonuclease Z [Thermobifida fusca YX] gi|123629478|sp|Q47PQ7|RNZ_THEFY RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|71915660|gb|AAZ55562.1| RNAse Z [Thermobifida fusca YX] Length = 318 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 83/333 (24%), Gaps = 92/333 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG ++ VP N R ++ D Sbjct: 1 MSTR-ELIVLGTSSA--VP---------TKRRAHNG----------YFLRWDGHGILFDP 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR------GYFLKQKRPIDV---- 108 G Q+ + I V TH H DH G+ G+ G + Sbjct: 39 GEGTQRQMRYAGISAHDITRVCVTHFHGDHSLGLPGVIQRIARDGVTHPVRVAYPAAGQE 98 Query: 109 ------YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 YA + E+ D + + + + + G I A Sbjct: 99 YWERLRYATSFVDTEVIEAQPLA----GDEVVVSGEDEFTVTALPLDHSIPTYGYRI-AE 153 Query: 163 PILQQ---------------HGRISSLGFRFGN------------------VAYCTDVNA 189 P GR+ + GF A+ D Sbjct: 154 PDRVHMLADRLAARGIRGPAVGRLKAEGFLIDAAGNRVELADYSVVRPGQVFAFVMDT-G 212 Query: 190 FPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 ++ + D L+I+A + H + ++ + +LTH Sbjct: 213 VCDTAVRLAERADLLVIEATFLNAEAELAARYRHLTAGQAGMIAAQAGVRRLVLTHFSER 272 Query: 244 LDYDMVLKSTPS-------RVVPAFDGMQFSSP 269 + + +V A D M+ + P Sbjct: 273 YGREEEDRFIAEAAACFSGEIVLAQDVMRVAVP 305 >gi|222151400|ref|YP_002560556.1| hypothetical protein MCCL_1153 [Macrococcus caseolyticus JCSC5402] gi|254808647|sp|B9E6P2|RNZ_MACCJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|222120525|dbj|BAH17860.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 306 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 59/175 (33%), Gaps = 40/175 (22%) Query: 13 GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ 72 G S G+P K R T++++ N + D G Q+L Sbjct: 7 GTSAGLPT-------------KERNTQTTIL---SLNPLYNEYWMFDCGEAAQHQILHTS 50 Query: 73 VL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAA----PDCMKHLFESFR 123 + + + +H H DHI G+ G+ R + Q + + +Y L S Sbjct: 51 IKLGRLTHIFISHLHGDHIFGLPGVLTSRSFQGGQDKKLTLYGPTGLKQFVDTVLTISCS 110 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + YP +E ++ + IE +HG I S G+R Sbjct: 111 HL-------NYP-------LEIIEIDHGDEFVINDIEITVGALKHG-IPSFGYRI 150 >gi|187779971|ref|ZP_02996444.1| hypothetical protein CLOSPO_03567 [Clostridium sporogenes ATCC 15579] gi|187773596|gb|EDU37398.1| hypothetical protein CLOSPO_03567 [Clostridium sporogenes ATCC 15579] Length = 346 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 23/95 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL I+ + +++D G Sbjct: 2 LDLALLGCGGGMPIP----------------DRFLSSLLINYRGRK-----ILIDCGEGT 40 Query: 65 Y--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 M++L SID + TH H DH G+ GL Sbjct: 41 QVSMKMLGWGFKSIDIICITHMHGDHTVGLPGLLA 75 Score = 41.3 bits (96), Expect = 0.14, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 8/72 (11%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINP 232 ++Y TD ++ ++N D I + L + + H + E K Sbjct: 244 KLSYITDTRPI-DSIIDFIENSDLFICEGTYGQDEDLHKAIRNKHMTFREGAKLANRGTV 302 Query: 233 KNAILTHMHVDL 244 ILTH + Sbjct: 303 SQLILTHFSPAM 314 >gi|254447028|ref|ZP_05060495.1| cAMP phosphodiesterase class-II:Metallo-beta-lactamase superfamily [gamma proteobacterium HTCC5015] gi|198263167|gb|EDY87445.1| cAMP phosphodiesterase class-II:Metallo-beta-lactamase superfamily [gamma proteobacterium HTCC5015] Length = 254 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 24/170 (14%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAA 111 + V++D G + E++ I + TH H DHI G + F Q P+ V+A Sbjct: 24 DEDVLIDAGTGL-TTLSIEEIKRIRHIFLTHSHLDHIAGFPLMVDTLFGHQVEPLQVHAH 82 Query: 112 PDCMKHLFES-FRYC----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 P+ ++ L E F + F+ L+ + + V + + +E IP+ Sbjct: 83 PETIEALKEHIFNWVIWPNFEELEFQGVSAFEWCPMEHGERVQVGAR----ELEMIPVNH 138 Query: 167 Q-HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN---LDFLIIDA 208 HG + +R + + D + L LD LI++ Sbjct: 139 TVHG----VAYRVVQGEKSFCFSGDTTT-NDSLWQTLNQGAPLDMLIVEC 183 >gi|56206559|emb|CAI24609.1| elaC homolog 2 (E. coli) [Mus musculus] Length = 824 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 474 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 514 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 573 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 574 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 633 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 634 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 688 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 689 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 746 Query: 265 QF 266 + Sbjct: 747 KV 748 >gi|322421440|ref|YP_004200663.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320127827|gb|ADW15387.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 359 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R + ++ D G + + SIDA+ +H H DH G+D + + R IDV+ Sbjct: 27 RPTGRALLFDCGK--MHHLAKRVYTSIDAIFISHAHMDHFMGMDSVIRHSHASPRTIDVF 84 Query: 110 AAPDCMKHLFESFR 123 P + F Sbjct: 85 GPPGLANRMASKFA 98 >gi|163816082|ref|ZP_02207452.1| hypothetical protein COPEUT_02262 [Coprococcus eutactus ATCC 27759] gi|158448892|gb|EDP25887.1| hypothetical protein COPEUT_02262 [Coprococcus eutactus ATCC 27759] Length = 305 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 75/299 (25%), Gaps = 96/299 (32%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 +LG G + +P R +SL + +++D G Sbjct: 6 LLGTGGMMPLP----------------YRALTSLVVRYNGHE-----MLIDCGEGTQTSM 44 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 Q ID + +TH HADHI G+ G L A L + Sbjct: 45 RQQG-TIGFKQIDVICFTHFHADHISGLP---GLLLTIGN------AERTEPLLMVGPKR 94 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMK-SAGGVIEAIPILQQHGRISSLGF-----RF 178 K ++ P I+ ++ + I H ++ G+ R Sbjct: 95 LEKVVNSLRVIAPELPFEIKFQELSEAEESFEWQDIRVDAFRVNH-NVTCYGYSMTLPRT 153 Query: 179 GNV-----------------------------AYCTDVNAFPAESLEKL----------- 198 G Y D+ P KL Sbjct: 154 GKFSVDRAKENDIPMKYWNGLQKGNTYEVDGHVYTPDMVLGPERKGLKLTYCTDTRPTPL 213 Query: 199 -----QNLDFLIIDA--------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 + D I + +K H H + E+ + LTH + Sbjct: 214 IEKYAEGSDLFICEGMYGEKEKEIKAVEH-KHMMMQEAANIAAEADVGELWLTHYSPSM 271 >gi|56206558|emb|CAI24608.1| elaC homolog 2 (E. coli) [Mus musculus] Length = 823 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 473 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 512 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 513 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 572 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 573 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 632 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 633 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 687 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 688 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 745 Query: 265 QF 266 + Sbjct: 746 KV 747 >gi|27229304|ref|NP_758829.1| zinc phosphodiesterase ELAC protein 2 [Rattus norvegicus] gi|41017513|sp|Q8CGS5|RNZ2_RAT RecName: Full=Zinc phosphodiesterase ELAC protein 2; AltName: Full=ElaC homolog protein 2; AltName: Full=Ribonuclease Z 2; Short=RNase Z 2; AltName: Full=tRNA 3 endonuclease 2; AltName: Full=tRNase Z 2 gi|26000218|gb|AAN75376.1| ELAC2 [Rattus norvegicus] Length = 827 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 104/302 (34%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 477 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 516 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 517 EGTFGQLCRHYGQQIDRVLCNLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 576 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EA 161 V A L + C + L + P P + ++ E Sbjct: 577 VVAPTQLRAWLQQYHNQCQEILHHISMIPAKCLQKGAEVPSPPVERLISLLLETCDLQEF 636 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 637 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 691 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 692 LEEEAVEKTHSTTSQAIGVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 749 Query: 265 QF 266 + Sbjct: 750 KV 751 >gi|88800196|ref|ZP_01115764.1| Beta-lactamase-like protein [Reinekea sp. MED297] gi|88777042|gb|EAR08249.1| Beta-lactamase-like protein [Reinekea sp. MED297] Length = 255 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 67/221 (30%), Gaps = 54/221 (24%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSID---AVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +VD G LR + + D +L TH H DHI G L + Sbjct: 18 EAAGDYFLVDCGFGLKEIEARLRNRGVHPDELKGILVTHEHGDHIKGAP-----MLANRY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I ++ +HL + + + + + G +E + Sbjct: 73 QIPLWTTYGTARHLKREVPTLHRFMPN--------------------TRLSLGQLEVETV 112 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H F F + TD+ + L+++ L+NG + Sbjct: 113 TVPHDSAEPSQFLFRHQGLTFGLLTDLGSITPRVRHAYHECQLLMLECNHDPNMLQNGPY 172 Query: 215 SS-----------HFSLSESLKKIELIN---PKNAILTHMH 241 H S ++ + + +N + +++H+ Sbjct: 173 PPSLKRRVGGNFGHLSNDQAAELLTCVNRSVLERVLVSHIS 213 >gi|330834309|ref|YP_004409037.1| ribonuclease Z [Metallosphaera cuprina Ar-4] gi|329566448|gb|AEB94553.1| ribonuclease Z [Metallosphaera cuprina Ar-4] Length = 291 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 54/238 (22%) Query: 52 SNTTVIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 ++++D G + +++ ++ ++ + TH HADH+ G+ L +K + Sbjct: 27 DGFSMLMDCGEGTQITMIKNSINIMRVNLIAITHLHADHVLGLPSLIQTMGMYDRKEKLY 86 Query: 108 VYAAPDCMKHLFESFRYCFKAL------------DDRTYPPIVNPIVIENNDVPICMKSA 155 + + L SF + + P V+ + + + Sbjct: 87 LMGPESLKEFLKVSFEHTYFRPGFPIEFVSTYEDKKVRVRPFKTCHVVPSQGFLVEEIDS 146 Query: 156 GG---------VIEAIPIL--QQHGRISSLG------------FRFGNVAYCTDVNAFP- 191 I ++ + GR +G R +AY D P Sbjct: 147 INLDVERLKREGITDWRVMRELKGGREVKVGERTLKSEDYLVVKRGVRLAYTGDTR--PC 204 Query: 192 AESLEKLQNLDFLI--------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + + +D L+ IDA + G H + SE+ + L H+ Sbjct: 205 DSVINSAKGVDLLLHDSTFEDGIDASEYG----HSTSSEAALVAREAEARRLALIHIS 258 >gi|300362616|ref|ZP_07058792.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus gasseri JV-V03] gi|300353607|gb|EFJ69479.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus gasseri JV-V03] Length = 265 Score = 53.6 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 53/252 (21%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I + +++D G D QV + ID V +H H DH G+ Sbjct: 14 STLIETPQHK-----ILMDAGLSGKKTKDLLAQV-GVDIKDIDMVFISHDHTDHSGGL-- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES + I V + N + Sbjct: 66 --GVLVRRYPKISAYANSGTWNYLIESNK-------------IGKLPVEQINTFESGITK 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--- 207 G ++ H + F A TD + ++++ D +++ Sbjct: 111 TFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEIKDADGYLMEFNY 170 Query: 208 ---ALKNGLHS-----------SHFSLSESLK-KIELINP--KNAILTHMHVDLDYDMVL 250 L+NG +S H S ++ +++++P K+ L H + + Sbjct: 171 DDMMLRNGPYSWSLKQRIMSDVGHLSNDQAADTLLDVVSPKTKHIFLAHRSQHNNTQYLA 230 Query: 251 KSTPSRVVPAFD 262 T ++ A D Sbjct: 231 HETAEDLLVAGD 242 >gi|319796532|ref|YP_004158172.1| beta-lactamase domain protein [Variovorax paradoxus EPS] gi|315598995|gb|ADU40061.1| beta-lactamase domain protein [Variovorax paradoxus EPS] Length = 286 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 18/154 (11%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C K+ RT +S + +T ++VD G L E + ID V+ TH H D Sbjct: 27 CSGAIAKDCRT-TSFLV--------DTDLLVDAGTGVGDLTLDE-MARIDDVVLTHSHLD 76 Query: 88 HIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIV 142 HI + + ++ +P+ V+A ++ L D + P P V+ Sbjct: 77 HIAALPLMLDAVGSRRTQPLRVHALRATIEALRAHVFNNVIWPDFESIPSPEAPFVSFHN 136 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 I V SA +IE +P + + + GF Sbjct: 137 ISVGQVLQLGTSAPKLIEVLPAVH---TVPACGF 167 >gi|255348710|ref|ZP_05380717.1| ribonuclease Z [Chlamydia trachomatis 70] gi|255503250|ref|ZP_05381640.1| ribonuclease Z [Chlamydia trachomatis 70s] gi|255506928|ref|ZP_05382567.1| ribonuclease Z [Chlamydia trachomatis D(s)2923] gi|289525387|emb|CBJ14864.1| Ribonuclease Z [Chlamydia trachomatis Sweden2] gi|296434939|gb|ADH17117.1| ribonuclease Z [Chlamydia trachomatis E/150] gi|296438659|gb|ADH20812.1| ribonuclease Z [Chlamydia trachomatis E/11023] Length = 304 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 84/284 (29%), Gaps = 70/284 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG C P R + + R + ++ D G Sbjct: 6 LTILG----------------CSSQQPTRHRNHGAYLL-----RWNGEGLLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHL-FES 121 Q + + + + +H H DH G+ +R + PI Y K+ Sbjct: 45 QFIYANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDRVSHPIHCYYPASGKKYFDRLR 104 Query: 122 FRYCFKALDDRTYPPIVNP--------IVIENNDVPICMKSAGGVI-EAIPILQQHGRIS 172 + + PI + IE+ + + + G I E +I Sbjct: 105 YSTIYHETIKVIEHPIDHEGIVEDFGNFRIESRQLDHLVDTLGWRITEPDTTKFIPEKIK 164 Query: 173 SLGFR---------------------FGNVAYC--TDVNAFPAESL------EKLQNLDF 203 + G + +V+Y D A A+SL + +N Sbjct: 165 AAGLKGPIMQELINKGQVKVNDTIVHLDDVSYTRKGDSIAVVADSLPCQAIVDLARNARI 224 Query: 204 LIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 L+ ++ H H + ++ ++ + + ILTH Sbjct: 225 LLCESTYLEEHSHLAKSHYHMTAKQAAEQAKRAEVQQLILTHFS 268 >gi|295691939|ref|YP_003600549.1| metallo-beta-lactamase family protein [Lactobacillus crispatus ST1] gi|295030045|emb|CBL49524.1| Metallo-beta-lactamase family protein [Lactobacillus crispatus ST1] Length = 265 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 57/249 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ--VLRE---QVLSIDAVLYTHPHADHIHGID 93 +SL ++ +++D G +L E + ID +H H DH G+ Sbjct: 13 NTSLIVT------GQHKILMDAGLSGKKTKDLLAEVGVDIDEIDMAFLSHDHTDHSGGL- 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 G +++ ID +A ++L ++ P IE Sbjct: 66 ---GVLMRRYPKIDAFANSGTWQYLLDT--------QKIGKLPAEQINTIEPGQTK---- 110 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID-- 207 G ++ H + F VA+ TD E +++ D +++ Sbjct: 111 -TFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDTGYVSEEVEGTIEDADAYMMEFN 169 Query: 208 ----ALKNGLHS-----------SHFSLSESL-KKIELINP--KNAILTHMHVD-----L 244 L++G +S H S E+ ++++ P K+ L H L Sbjct: 170 YDNMMLRDGPYSWSLKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEYL 229 Query: 245 DYDMVLKST 253 ++ + Sbjct: 230 AHETAKEML 238 >gi|229195920|ref|ZP_04322674.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228587562|gb|EEK45626.1| Zn-dependent hydrolase [Bacillus cereus m1293] Length = 550 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 78 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 125 IKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFK 158 >gi|158521497|ref|YP_001529367.1| metal-dependent hydrolase [Desulfococcus oleovorans Hxd3] gi|158510323|gb|ABW67290.1| metal-dependent hydrolase [Desulfococcus oleovorans Hxd3] Length = 279 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 52 SNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 S+ +I+D G ++ E+ +++TH H DH+ G+ + + I Sbjct: 35 SDDIIIIDAGTGIRRLGKSLVTEKRFEYH-LIFTHAHWDHLMGLPFFKPL-YMHQTRITA 92 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y P + + + + P + G + PI H Sbjct: 93 YRCPFPGDYAEKMISRVMTPPHFPIRYADLKADISFEKGCPNGFE--IGSVSITPIKLSH 150 Query: 169 GRISSLGFRF----GNVAYCTDVN-------AFPAESLEKL-QNLDFLIIDALK-NGLHS 215 S G++F + TD E+ +K + D LI DA + Sbjct: 151 PGSGS-GYKFTEEGKTFVFLTDNELGFIHDGGLSQEAYQKFSEGADLLIHDAEYIPEEYG 209 Query: 216 S-----HFSLSESLKKIELINPKNAILTHMHVD 243 + H ++ + + K L H++ D Sbjct: 210 TQIDWGHSVYTDVIDLALAADVKQLGLFHLNQD 242 >gi|118477147|ref|YP_894298.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118416372|gb|ABK84791.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] Length = 564 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 92 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 139 IKTTFFKTNHSIPDCLGIVFHTREGNVVHTGDFK 172 >gi|13540343|gb|AAK29421.1|AF348157_2 putative prostate cancer susceptibility protein [Mus musculus] Length = 824 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 474 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 514 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 573 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 574 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 633 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 634 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 688 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 689 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 746 Query: 265 QF 266 + Sbjct: 747 KV 748 >gi|198452192|ref|XP_002137430.1| GA26549 [Drosophila pseudoobscura pseudoobscura] gi|198131825|gb|EDY67988.1| GA26549 [Drosophila pseudoobscura pseudoobscura] Length = 757 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|281355329|ref|ZP_06241823.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281318209|gb|EFB02229.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 269 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++IVD G ++ L I A L TH H DH G R + + Sbjct: 19 SCGDGSIIVDVGFSRKETCCRLRTLGLNAEEIKAALLTHEHDDHSKG---CRVFC--DEF 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I + + L + + V+E + G P Sbjct: 74 DIPLCTSSLTANFLRKK--------------GKLPVRVLEFEP---GGEFQIGGFGVEPF 116 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 QH ++ +GF + TD+ ++++L + D L+++ Sbjct: 117 AVQHDAVNPVGFVIRREGLKIGIATDLGDINMLAMQRLSDCDALVLE 163 >gi|223933275|ref|ZP_03625265.1| ribonuclease Z [Streptococcus suis 89/1591] gi|302024048|ref|ZP_07249259.1| ribonuclease Z [Streptococcus suis 05HAS68] gi|330832493|ref|YP_004401318.1| ribonuclease Z [Streptococcus suis ST3] gi|223898089|gb|EEF64460.1| ribonuclease Z [Streptococcus suis 89/1591] gi|329306716|gb|AEB81132.1| ribonuclease Z [Streptococcus suis ST3] Length = 309 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 56/184 (30%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MQIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INQVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + + ID+Y Sbjct: 43 QNQILETTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDIDIYGPVGIRSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + V +++ H I + Sbjct: 103 LASLK---------VSGTRLPYRIHFHEFDVDTVGQVLET--DKFTVFAEKLDH-TIPCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|298483933|ref|ZP_07002103.1| metallo-beta-lactamase domain-containing protein [Bacteroides sp. D22] gi|298269842|gb|EFI11433.1| metallo-beta-lactamase domain-containing protein [Bacteroides sp. D22] Length = 276 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 76/260 (29%), Gaps = 57/260 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G + V + + T ++VD G Sbjct: 12 ELIMLGTGNAT-VTKCYNTC---------------------FILKTKETVLLVDAGGGNG 49 Query: 64 FYMQVLREQ--VLSIDAVLYTHPHADHIHG------IDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + + SI + TH H DHI G I R VY + Sbjct: 50 ILNQLEKVDMLIDSIHDMFVTHAHTDHILGAVWMIRIIAQRASNGHYSGRFRVYGHDKVL 109 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + + +N V E +V G + + G Sbjct: 110 MVL----DQICRMTLPVSVMGAINKYV-EFCEVKHGDTLRLGDLNVQFFDIASTKEKQFG 164 Query: 176 FRFGNVAYCTDVNAFP--------AESLEKLQNLDFLIIDAL-------KNGLHSSHFSL 220 FR A D + ++ + +D+L+ +A + + H S Sbjct: 165 FR----ALLPDGKSLACLGDEPYNEQNRAYAEGVDWLLCEAFCLYADRERFKPYEKHHST 220 Query: 221 SE-SLKKIELINPKNAILTH 239 ++ + + + + KN +L H Sbjct: 221 AQDAGRLAQQLGVKNLLLYH 240 >gi|84394033|ref|ZP_00992771.1| hypothetical protein V12B01_03598 [Vibrio splendidus 12B01] gi|84375370|gb|EAP92279.1| hypothetical protein V12B01_03598 [Vibrio splendidus 12B01] Length = 313 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 82/285 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + TI+G G+ P NP R + + I++ T +++D G Sbjct: 24 SPQMNTTIIGSGS----PDY----------NP--ERVSAGVLITQ-----GGTQILIDMG 62 Query: 62 PDFYMQVLREQV--LSIDAVLYTHPHADH-----------IHGIDGLRGYF-----LKQK 103 + + V ++A+L+TH H DH + G Sbjct: 63 DGVKRNLEKHGVDGRKMNAILFTHHHLDHNADFSLIFTSALLGRGDFLVAGPKQTKYFVN 122 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I++Y + L ++LD+R ++ + I ++ + I+ Sbjct: 123 NNINLY-----DQDLDYRLGKTQRSLDER-----LDHLTIR--ELKSGDRFDVDEIKVST 170 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIID------------ 207 + H I S+ +RF +V D++A P + + ++ + LIID Sbjct: 171 LSVPH-TIESIAYRFDYRDQSVVITGDLSAGPGVA-KFAKDANCLIIDSGGMIMNKRGKK 228 Query: 208 -------------ALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 A K +H ++ ES + N + TH Sbjct: 229 QRNKTLKSERKNGAQKGKKQHAHLNIKESSQIAADANINKLVYTH 273 >gi|308800674|ref|XP_003075118.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] gi|116061672|emb|CAL52390.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] Length = 559 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 23/89 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG S G P T R SS+ + +E + D G Sbjct: 80 ELTFLGT--SSGAPSFT--------------RNVSSVALRLENEVW-----LFDCGEATQ 118 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGI 92 Q++R ++ I V TH H DHI G+ Sbjct: 119 HQLMRSKLKYAKITKVFITHMHGDHIFGL 147 >gi|325673912|ref|ZP_08153602.1| cobinamide kinase/cobinamide phosphate guanylyltransferase [Rhodococcus equi ATCC 33707] gi|325555177|gb|EGD24849.1| cobinamide kinase/cobinamide phosphate guanylyltransferase [Rhodococcus equi ATCC 33707] Length = 429 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 21/213 (9%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + +++D GPD +R + + +L TH H DH++ L +++ Sbjct: 14 IRGQTAGLIDDAILLDCGPDVPRAAVRAGRSLADVRHLLLTHAHPDHLNPAALLFRSWVR 73 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + RP+DV D + + D + P+V I I + +A + Sbjct: 74 RDRPLDVVGPADALDLCRD----WVGPDDPVRFVPVVPGDRIMLEGYTIRVLAAAHRVFR 129 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL--DFLIID---ALKNGLHSS 216 + G R V + TD P +LE +++ D + ++ + L + Sbjct: 130 DGDSVLYDITGPHGDR---VLWATDTGPLPGSTLEAVRDARFDAVFLEETFGTRTDLGAG 186 Query: 217 HFSL---SESLKKIELINP----KNAILTHMHV 242 H L +L + + + H+ Sbjct: 187 HHDLTTFPRTLAALREAGAVTDTSDVVAVHLSH 219 >gi|288925030|ref|ZP_06418966.1| ribonuclease Z [Prevotella buccae D17] gi|288338220|gb|EFC76570.1| ribonuclease Z [Prevotella buccae D17] Length = 304 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 59/174 (33%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N +S + +VD G MQ+ Sbjct: 8 ILGCGSAL-------------PTLKHNA---TSQVVEI-----REKLFMVDCGEGTQMQL 46 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R ++ I AV +H H DH G+ G+ F R + VYA L Sbjct: 47 RRSRIRFTKISAVFISHLHGDHCFGLIGMISTFGMLGRTASLHVYAPEALGPMLQSQLDL 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ ++ + + +E IP+ R G+ F Sbjct: 107 FCQGLEFEVV-----FHAVDPKVNKVVYEDRSLTVETIPLNH---RTPCCGYLF 152 >gi|259502479|ref|ZP_05745381.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259169622|gb|EEW54117.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 610 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 51/162 (31%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E I + TH H DHI G+ F Q Sbjct: 36 IIIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + +YA P M + ++ + + + + Sbjct: 91 KVNVPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 151 GVAVHTPQGTIIQTGDFKFD----LTPVGGLPGPNLQQMAKL 188 >gi|158321798|ref|YP_001514305.1| beta-lactamase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158141997|gb|ABW20309.1| beta-lactamase domain protein [Alkaliphilus oremlandii OhILAs] Length = 264 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 82/237 (34%), Gaps = 49/237 (20%) Query: 50 RGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + ++ + ++ A+L +H H+DHI+G+ L ++ Sbjct: 20 HDKDHFILIDAGLSGKQIENKLKEVDVDPRNLSAILVSHEHSDHINGVG-----ILSRRY 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +YA + + I + G P Sbjct: 75 NVPIYANTGTWEGMGCK---------------IGKVKEENIKNFVSNEDFYIGDFNIRPY 119 Query: 165 LQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H +GF + ++ TD+ + + +++ + +I+++ LK G + Sbjct: 120 RISHDANEPVGFSIKKKDIKISIATDLGYISEDVIGEIEGSNLVILESNHDEEMLKAGSY 179 Query: 215 S-----------SHFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKSTPSRV 257 H S + I + N K+ +L H+ + ++ + +T + Sbjct: 180 PYSLKRRVLSNMGHLSNEAAGNAIVELVHKNVKSILLAHLSKENNFPELAIATVKNI 236 >gi|170291024|ref|YP_001737840.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175104|gb|ACB08157.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 624 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 66/217 (30%), Gaps = 45/217 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHG 91 RSS+ I+ + V++D G + ++ + +DAV+ TH H DH Sbjct: 188 RSSVLITT-----DESNVLLDCGISLSSRSAFPRLDLI--DIDELDAVIITHAHLDHSGA 240 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN------ 145 + K VY + P + + N Sbjct: 241 L----PLLFKYGYRGPVYLTRPTRDLMMLLLYDYINLSQRVGSIPFFSWRDVVNMMNHTI 296 Query: 146 -----------NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN----AF 190 D+ + +AG + H I S NV Y D Sbjct: 297 TLDYTETVDISPDIKLTFYNAG---HILGSALAHLNIESARH---NVLYTGDFRFRDTKL 350 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKI 227 +++ K ++ LI++ G SL E+ + + Sbjct: 351 LDKAVRKFPRVETLIMECTYGGESDVLPSLPEAEEAL 387 >gi|123506046|ref|XP_001329114.1| Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase [Trichomonas vaginalis G3] gi|121912065|gb|EAY16891.1| Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase, putative [Trichomonas vaginalis G3] Length = 245 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 13/122 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 + +H H DH G+ + + + I V+A + ++ + F F Sbjct: 50 HIFLSHAHLDHTEGLRVVNYLYNDKCTKIIVHARKEIIEAIPLLFNQPFAGGHTM----- 104 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 P +E + ++ G + H + G+R ++AY TD P + Sbjct: 105 --PFELEEVEAGKPIQLQNG-VTITAFELNHTS-PNFGYRLDTPKRSMAYVTDTTFIPEK 160 Query: 194 SL 195 Sbjct: 161 DY 162 >gi|319654638|ref|ZP_08008719.1| hypothetical protein HMPREF1013_05341 [Bacillus sp. 2_A_57_CT2] gi|317393704|gb|EFV74461.1| hypothetical protein HMPREF1013_05341 [Bacillus sp. 2_A_57_CT2] Length = 233 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 59/220 (26%) Query: 51 GSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +T ++++ G ++ + ++ + L TH H DH I + K I+ Sbjct: 20 DGHTPLLLECGINYREIQKSFEFRMSEVAGCLVTHEHGDHCKSIKDVL------KAGINC 73 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + + + + I+ G +P QH Sbjct: 74 YMSEGTAEAI------------------GLEHHRIKKVSSKKQFTL--GTWTILPFDVQH 113 Query: 169 GRISSLGFRFGNVA-----YCTDVNAFPAESLEKLQNLDFLIIDA--------------- 208 LGF N A + TD + Q L L+++ Sbjct: 114 DVSEPLGFLLANQAGEKLLFATDTYYI----KYRFQGLTHLMVECNFSEKILLENILSGK 169 Query: 209 ----LKNGLHSSHFSLSESLKKIE---LINPKNAILTHMH 241 +K L SHFSL ++ L + L H+ Sbjct: 170 VPEVMKKRLRESHFSLENVKDFLKANDLSKVQEIWLLHLS 209 >gi|227889093|ref|ZP_04006898.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200] gi|227850322|gb|EEJ60408.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus johnsonii ATCC 33200] Length = 268 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 65/259 (25%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I +++D G D QV + ID + +H H DH G+ Sbjct: 17 STLIET-----EQHKILMDAGLSGKKTKDLLAQV-GVDIKDIDMIFISHDHTDHSGGL-- 68 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES I N V + N + Sbjct: 69 --GVLMRRYPQISAYANSGTWNYLIES-------------KKIGNLPVEQINTFESGVTK 113 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--- 207 G ++ H + F A TD + ++++ D +++ Sbjct: 114 TFGDLDVTSFATSHDAAEPQYYVFSSVGKRFACLTDTGYVSSTVKGEIKDADGYLMEFNY 173 Query: 208 ---ALKNGLHS-----------SHFSLSESLK-KIELINP--KNAILTH---------MH 241 L+NG +S H S ++ +++++P KN L H + Sbjct: 174 DDMMLRNGPYSWSLKHRIMSDVGHLSNDQAADTLLDVVSPKTKNIFLAHRSQHNNTQYLA 233 Query: 242 VDLDYDMVL---KSTPSRV 257 + +D+++ + P+ V Sbjct: 234 HETAHDLLVAGDANLPADV 252 >gi|302758340|ref|XP_002962593.1| hypothetical protein SELMODRAFT_404484 [Selaginella moellendorffii] gi|300169454|gb|EFJ36056.1| hypothetical protein SELMODRAFT_404484 [Selaginella moellendorffii] Length = 303 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 74/283 (26%), Gaps = 70/283 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 LG NP RR S + + + + D Sbjct: 8 MELVFLGT-----------------AANPSPRRNSSCVLL-----KIGKIMQLFDCAEGS 45 Query: 64 FYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 F Q R +ID + TH H DH+ G+ L + ++Y L S Sbjct: 46 FRQLQESRHSGSAIDRIFITHMHGDHVWGLPALLCAAKFRVNA-EIYGPQGIRDWLRMSL 104 Query: 123 ---------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----- 168 +Y L + + P + G I H Sbjct: 105 KSCRAKVPSKYKVHELILTQEKSLERVASLHVPANPHDDELPGNDISCSGDGVWHVLQDE 164 Query: 169 ----------GRISSLGFRFG-------------------NVAYCTDVNAFPAESLEKLQ 199 + G+ V D A + + Sbjct: 165 TLDIKAGLLTHNVPCWGYVLTEVKSEAEKESAGETTRGSRKVVILGDTANSKALTTAG-R 223 Query: 200 NLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + D ++ +A L N +H + + + IN K +LTH++ Sbjct: 224 DADVVVHEATLGNCNKETHSTPEMAGSFAKSINAKLLVLTHLN 266 >gi|256849371|ref|ZP_05554804.1| beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] gi|262047876|ref|ZP_06020824.1| beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|293380066|ref|ZP_06626162.1| metallo-beta-lactamase domain protein [Lactobacillus crispatus 214-1] gi|312977017|ref|ZP_07788766.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus crispatus CTV-05] gi|256714147|gb|EEU29135.1| beta-lactamase superfamily hydrolase [Lactobacillus crispatus MV-1A-US] gi|260571820|gb|EEX28393.1| beta-lactamase [Lactobacillus crispatus MV-3A-US] gi|290923380|gb|EFE00287.1| metallo-beta-lactamase domain protein [Lactobacillus crispatus 214-1] gi|310896345|gb|EFQ45410.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus crispatus CTV-05] Length = 265 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 59/250 (23%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +SL ++ +++D G D +V + ID +H H DH G+ Sbjct: 13 NTSLIVT------GQHKILMDAGISGKKTKDLLAEV-GVDINEIDMAFLSHDHTDHSGGL 65 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 G +++ ID +A ++L ++ P IE Sbjct: 66 ----GVLMRRYPKIDAFANSGTWQYLLDT--------KKIGKLPAEQMNTIEPGQTK--- 110 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID- 207 G ++ H + F VA+ TD E +++ D +++ Sbjct: 111 --TFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDTGYVSEEVEGTIEDADAYMMEF 168 Query: 208 -----ALKNGLHS-----------SHFSLSESL-KKIELINP--KNAILTHMHVD----- 243 L++G +S H S E+ ++++ P K+ L H Sbjct: 169 NYDNMMLRDGPYSWALKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEY 228 Query: 244 LDYDMVLKST 253 L ++ + Sbjct: 229 LAHETAKEML 238 >gi|330996790|ref|ZP_08320662.1| ribonuclease Z [Paraprevotella xylaniphila YIT 11841] gi|329572512|gb|EGG54163.1| ribonuclease Z [Paraprevotella xylaniphila YIT 11841] Length = 304 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 90/302 (29%), Gaps = 93/302 (30%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + TILGCG++L P R +S I+ ++D G Sbjct: 2 EKFELTILGCGSAL----------------PTTRHFATSQVINI-----REKLYMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHL 118 +Q+ R ++ ++ + +H H DH G+ GL F R +Y A L Sbjct: 41 GAQLQLRRSRLKFSRLNHIFISHLHGDHCFGLIGLISTFGLLGRTAPLYVHAPAAFGPIL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K LD R V ++ + + + + +IP+ RI GF F Sbjct: 101 QSLLSFFCKGLDFR-----VEFYPVDTSRHTLIHEDRSVYVYSIPLRH---RIECCGFLF 152 Query: 179 G-----------------------------------------------------NVAYCT 185 + AYC+ Sbjct: 153 QEKATLPHIRRDMIDFYRIPICEINNIKNGMDWTTEDGTLVPNHRLTEPSDPPRSFAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P + + +Q D L +A L + H + ++ K + H Sbjct: 213 DTCYLPELA-QYIQKADLLFHEATFSHDDLARAKETFHTTALQAATLARDSQVKKLCIGH 271 Query: 240 MH 241 Sbjct: 272 FS 273 >gi|301066380|ref|YP_003788403.1| putative hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] gi|300438787|gb|ADK18553.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei str. Zhang] Length = 560 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 22/137 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + +H HAD + + + + P+ V+ + + Sbjct: 50 PDF--SYLTENADRIAGIFLSHGHADAVGALP-----YFLVEHPVPVFGSELTIA----- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + + VI+ V G + H SLG Sbjct: 98 MAKVFMQHDAQA-KKFKDFHVIDEKSV-----IDFGDVSVSFFRTTHSIPGSLGIDIETS 151 Query: 179 -GNVAYCTDVNAFPAES 194 G + Y D P+ + Sbjct: 152 EGQIVYTGDFKFDPSAT 168 >gi|239818144|ref|YP_002947054.1| beta-lactamase domain protein [Variovorax paradoxus S110] gi|239804721|gb|ACS21788.1| beta-lactamase domain protein [Variovorax paradoxus S110] Length = 267 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 86/248 (34%), Gaps = 39/248 (15%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C K+ RT +S I +T ++VD G L E++ ID V+ TH H D Sbjct: 8 CSGAIAKDCRT-TSFLI--------DTDLLVDAGTGVGDLTL-EEMAGIDDVVLTHCHLD 57 Query: 88 HIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----PIVNPIV 142 HI + + ++ R + V+A ++ L D + P P V+ Sbjct: 58 HIAALPLMLDAVGGRRTRSLRVHALRATIEALRAHVFNNVIWPDFESIPSPEAPFVSFHD 117 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAESLE 196 I V +A IE +P + + + GF N + D + Sbjct: 118 IAVGQVLQLGSAAPKRIEVLPAVH---TVPACGFAVSRAEGGANWVFTGDTERNTPF-WD 173 Query: 197 KLQNLDF--LIID--------ALKNGLHSSHFSLSESL-KKIELINPKNAILTHMHVDLD 245 +L LD L+I+ AL H S +L ++ I+P ++ Sbjct: 174 RLNALDVAMLVIETAFSNREQALAERSL--HLS-PRALADELAHIDPGKQFPIYITHTKP 230 Query: 246 YDMVLKST 253 + Sbjct: 231 AETEEIMW 238 >gi|269125324|ref|YP_003298694.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268310282|gb|ACY96656.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 316 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 80/268 (29%), Gaps = 57/268 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R ++ D G Q++R V ID + TH H DH G+ G+ + + P Sbjct: 28 RWDGQGLLFDPGEGTQRQMIRAGVAAHDIDWICITHFHGDHCLGLPGVIQRIARDEVPHP 87 Query: 108 VYAA-PDCMKHLFESFRYC--FKALDDRTYPPIVNPI-VIENNDVPICMKSAGGV----- 158 V A P + R+ F+ D P+ VIE + P + + Sbjct: 88 VRALFPASGHRYWRRLRHAAVFRDTDVVRERPVEGGHAVIETGEAPFTLSARRLDHPVEA 147 Query: 159 ----------IEAIPILQQH--------GRISSLGFRF----GNVAYCTDVNAFP----- 191 + +P GR+ G R G D + P Sbjct: 148 YGYRLEEPDGVTMLPDRLAARGITGPMIGRLQREG-RVTAPDGRTVTLADCS-VPRPGQK 205 Query: 192 ----------AESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNA 235 + +D LII++ H + ++ + + Sbjct: 206 LAFVMDTRECEAAYALADGVDMLIIESTFLEEDADLARRYGHLTARQAGRIAAAGGVRRL 265 Query: 236 ILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 +LTH + + + A+DG Sbjct: 266 VLTHFSERYPAEDFPR-YAEQAAQAYDG 292 >gi|225021577|ref|ZP_03710769.1| hypothetical protein CORMATOL_01598 [Corynebacterium matruchotii ATCC 33806] gi|305681247|ref|ZP_07404054.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|224945568|gb|EEG26777.1| hypothetical protein CORMATOL_01598 [Corynebacterium matruchotii ATCC 33806] gi|305659452|gb|EFM48952.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length = 254 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 75/240 (31%), Gaps = 28/240 (11%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--- 102 + + + ++++D GP ++ Q + +L++H H DH L + Sbjct: 22 YLIQPSNGQSLLMDIGPGVLAKMQEYQNPNDAHMLFSHLHPDHCLDFPSLLVWRRYHPTA 81 Query: 103 --KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + HL +DD + + + I G Sbjct: 82 PAQHRNICMGPHHTPIHLGRLSADIPDEVDDMS-------DTFDFHPWRIRHPHPIGDFT 134 Query: 161 AIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LK 210 H I S R +AY D +A+ E ++ +N D + +A Sbjct: 135 VTAYPTIH-PIESYAMRVTAPNGRIIAYSGD-SAYSTELIDCARNADIFLCEANWGKSCD 192 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSR-VVPAFDGMQF 266 N + H ++ N K+ IL H+ + + + ++ GM+ Sbjct: 193 NKAPNMHMCGQDAGIIATKANAKHLILVHIPPWGDPIGAMEGARQHYDGPISLSYSGMEI 252 >gi|152993034|ref|YP_001358755.1| ribonuclease Z [Sulfurovum sp. NBC37-1] gi|151424895|dbj|BAF72398.1| ribonuclease Z [Sulfurovum sp. NBC37-1] Length = 317 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 37/202 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S G PT +N S + N + D G Sbjct: 1 MKLTFLGT--SAG-----------KPTTERN----VSAL--GLEFEQDNKWYLFDCGEAT 41 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 Q++R +V +D + TH H DH +G+ GL K P+ +Y K + Sbjct: 42 QHQIMRSSLRVGRLDTIFITHLHGDHYYGLLGLLSSKKLDKAFNPLTIYGPKGIKKFIGC 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 +F D ++ + + I +V ++ +P++ + S+ F Sbjct: 102 AFA-------DISFEHLGYHLKIIEYEVGETFVFDRFTLKVLPLVH---SVESVAFYIKE 151 Query: 181 VAYCTDVNAFPAESLEKLQNLD 202 D + E + + L+ Sbjct: 152 ----NDTSNKLNEEKLRAEGLE 169 >gi|116494819|ref|YP_806553.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus casei ATCC 334] gi|191638329|ref|YP_001987495.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei BL23] gi|227535184|ref|ZP_03965233.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631586|ref|ZP_04674617.1| metallo-beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|116104969|gb|ABJ70111.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei ATCC 334] gi|190712631|emb|CAQ66637.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus casei BL23] gi|227187229|gb|EEI67296.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526051|gb|EEQ65052.1| metallo-beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|327382356|gb|AEA53832.1| Metallo-beta-lactamase superfamily protein [Lactobacillus casei LC2W] gi|327385556|gb|AEA57030.1| Metallo-beta-lactamase superfamily protein [Lactobacillus casei BD-II] Length = 560 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 22/137 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + +H HAD + + + + P+ V+ + + Sbjct: 50 PDF--SYLTENADRIAGIFLSHGHADAVGALP-----YFLVEHPVPVFGSELTIA----- 97 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + + VI+ V G + H SLG Sbjct: 98 MAKVFMQHDAQA-KKFKDFHVIDEKSV-----IDFGDVSVSFFRTTHSIPGSLGIDIETS 151 Query: 179 -GNVAYCTDVNAFPAES 194 G + Y D P+ + Sbjct: 152 EGQIVYTGDFKFDPSAT 168 >gi|315122710|ref|YP_004063199.1| beta-lactamase domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496112|gb|ADR52711.1| beta-lactamase domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 560 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 33/192 (17%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGID 93 + ++VD G F L E+ ++ A++ TH H DH + Sbjct: 27 FGNPNNRKWIMVDCGVSFPKDDLPGVDLVFPDITFVLEERKNLMAIIITHAHEDHYGALH 86 Query: 94 GLRGYFLKQKRPIDVYAAPDCM-----KHLFESFRYCFKALDDRTYPPI-VNPIVIENND 147 L + + VYA+P + K ++E F + + I + P I++ Sbjct: 87 DLWSFL-----NVPVYASPFAIGLLEAKGVYERFPKNIPCISFQAGDQIDIGPFSIKSIQ 141 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKL--QNLDFL 204 V + + +I P+ G I G ++ + + D+ +SL + + + L Sbjct: 142 VNHSIPESMALIIRSPV----GNIVHTGDWKLDDTSVLGDLTD--EDSLRAIGDEGVLAL 195 Query: 205 IIDALKNGLHSS 216 + D+ LH + Sbjct: 196 MCDSTNAMLHGT 207 >gi|297517667|ref|ZP_06936053.1| ribonuclease Z [Escherichia coli OP50] Length = 144 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 25/114 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTR--SSLKISRVSERGSNTTVIVDTGP 62 LG S GVP RTR +++ ++ S + D G Sbjct: 7 MELIFLGT--SAGVP----------------TRTRNVTAILLNLQHPTQSGL-WLFDCGE 47 Query: 63 DFYMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAP 112 Q+L +D + +H H DH+ G+ GL +P+ +Y Sbjct: 48 GTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQ 101 >gi|300796403|ref|NP_001179994.1| zinc phosphodiesterase ELAC protein 2 [Bos taurus] gi|297486832|ref|XP_002695858.1| PREDICTED: elaC homolog 2 (E. coli) [Bos taurus] gi|296476622|gb|DAA18737.1| elaC homolog 2 [Bos taurus] Length = 777 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 104/304 (34%), Gaps = 64/304 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS + +T++++D G Sbjct: 432 SQYPEVVFLGTGSAI----------------PMKIRNVSSTLV----NISPDTSLLLDCG 471 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGL-----RGYFLKQK--RPID 107 + Q+ R +D AV +H HADH G+ + R + P+ Sbjct: 472 EGTFGQLCRHYGDGVDRVLGSLAAVFVSHLHADHHTGLLNILLQRERALASLGRPCHPLL 531 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIEA 161 V A L + C L + P E + + G+ E Sbjct: 532 VVAPTQLRTWLQQYHNQCQPLLHHVSVIPAKCLQKGAEVSSPEVERLINLLLETCGLEEF 591 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + G++ V Y D P E+L ++ ++ LI D Sbjct: 592 QTCLVRHCKHAFGCALVHMSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 646 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ ++ +LTH Y + +P +V AFD M Sbjct: 647 LEEEAVEKTHSTTSQAIGVGMRMSAAFIMLTHFSQR--YAKIPLFSPDFNEKVGIAFDHM 704 Query: 265 QFSS 268 + S Sbjct: 705 KVSL 708 >gi|256425584|ref|YP_003126237.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256040492|gb|ACU64036.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 302 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 24/183 (13%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHA 86 + P R ++ ++ + ++VD G +Q R ++ + + +H H Sbjct: 10 NSALPTLERHPTAQIVTCNDQL-----ILVDCGEGTQLQFARYKIRRSRLRYIFISHLHG 64 Query: 87 DHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 DH G+ GL L ++ P+ V+A P+ L + + Sbjct: 65 DHYFGLIGLINSLSLLGRQDPLTVFAPPELEAILRLQM-------ECSGTVLQFELQFVP 117 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD---VNAFPAESLEK 197 + + ++ QH RI GF F D V PA K Sbjct: 118 LLEENQGVILEDKDLKVSFFPTQH-RIPCYGFAFEMQKRKRKIIPDQAKVYEIPAAYFSK 176 Query: 198 LQN 200 LQ Sbjct: 177 LQQ 179 >gi|315641035|ref|ZP_07896118.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315483204|gb|EFU73717.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 206 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 13/111 (11%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 A++ TH H DHI +D +R + I VY + D + L + P Sbjct: 49 AIILTHTHYDHIGAVDAIRDEY-----QIPVYVSSDEQEWLQS------PPKNLSGRHPE 97 Query: 138 VNPIVIEN--NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + PI N ++ + G + I S+ F F + C D Sbjct: 98 LGPITARNAEHEFELNDTLTIGSFSFEVVPTPGHSIGSVSFIFDSFVVCGD 148 >gi|296269111|ref|YP_003651743.1| beta-lactamase domain-containing protein [Thermobispora bispora DSM 43833] gi|296091898|gb|ADG87850.1| beta-lactamase domain protein [Thermobispora bispora DSM 43833] Length = 327 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 82/293 (27%), Gaps = 76/293 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG +++ PT +N R + D Sbjct: 1 MSVR-ELVVLGTASAV-------------PTRERNHNG--------YLLRWDGEGFLFDP 38 Query: 61 GPDFYMQVLREQVLSIDA--VLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+L V + D + TH H DH G+ G+ R P+ V A P + Sbjct: 39 GEGTQRQMLHAGVSAHDITWICVTHFHGDHCLGLPGVIQRIARDNVPHPVQV-AYPAAGE 97 Query: 117 HLFESFRYCFKALDDRTYPPIV----------NPIVIENNDVPICMKSAGGVIEAIPILQ 166 + R+ D P P+ + + + S G IE P Sbjct: 98 EYWRRLRHASAFADTEVIVPRPVSGDEARLPAGPLTLTARPLSHPIPSYGYRIEEPPGRT 157 Query: 167 Q----------HGRISSLGFRFG----------------------NVAYCTDVNAFPAES 194 HG + R G + A+ D + Sbjct: 158 MLPAELARRGIHGPMIGELQRKGSITVPDGSVVTLEECSVPRPGQSFAFVMDT-RLCDAA 216 Query: 195 LEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +D L+++A H H + +++ + + +LTH Sbjct: 217 FALADGVDLLVVEATFLSAEASLAAHYGHLTAAQAGRLAAACGVRRLVLTHFS 269 >gi|300768871|ref|ZP_07078765.1| metallo-beta-lactamase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493604|gb|EFK28778.1| metallo-beta-lactamase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 253 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 37/212 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR-GYFLKQKRP--- 105 + +++D G + L E + +D+VL TH H DH + L+ + L+ Sbjct: 33 GDYHLLLDCGSGA-LNALEEILDPLQLDSVLLTHYHHDHTADVGVLQYYWQLRAGERKTP 91 Query: 106 -IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y D + + E + G + + Sbjct: 92 VLPIYG----------------HTADPLNFGALTWANATEGRAYDPAAVNQIGPFDVSFL 135 Query: 165 LQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 +H + + + + + D P + L+ D + Sbjct: 136 PTKH-PVPAYAVKLVERATGQELVFSADTAYLPELA-TFAAGAQLLMTDT-NFAADKTGK 192 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + ++S K + K +LTH+ D+ + Sbjct: 193 MWHMTSAQSGKIAKDARVKKLLLTHLPQDVSF 224 >gi|182701975|ref|ZP_02618967.2| ribonuclease Z [Clostridium botulinum Bf] gi|237794728|ref|YP_002862280.1| ribonuclease Z [Clostridium botulinum Ba4 str. 657] gi|182672598|gb|EDT84559.1| ribonuclease Z [Clostridium botulinum Bf] gi|229261555|gb|ACQ52588.1| ribonuclease Z [Clostridium botulinum Ba4 str. 657] Length = 346 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +LGCG + +P R SSL ++ + +++D G Sbjct: 2 LNLALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 41 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITG 100 Query: 118 LFESFRYC 125 L Y Sbjct: 101 LRTIVPYL 108 Score = 39.7 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 247 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAVKNKHMTFREGAKLANRGKVSQL 305 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 306 ILTHFSPAM 314 >gi|254851399|ref|ZP_05240749.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|3724326|dbj|BAA33615.1| unknown [Vibrio cholerae] gi|254847104|gb|EET25518.1| conserved hypothetical protein [Vibrio cholerae MO10] Length = 446 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 18 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 77 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 KQ +Y + Sbjct: 78 LAAGFKQ----PIYCTAATAE 94 >gi|225027519|ref|ZP_03716711.1| hypothetical protein EUBHAL_01775 [Eubacterium hallii DSM 3353] gi|224955158|gb|EEG36367.1| hypothetical protein EUBHAL_01775 [Eubacterium hallii DSM 3353] Length = 280 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 71/247 (28%), Gaps = 54/247 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R + ++++D G ++E+ I+ + +TH HADHI G+ GL +R Sbjct: 3 RYNGNSILIDCGEGT-QVAIKEKGWSFKPIEVICFTHYHADHISGLPGLLLTLGNAQRTE 61 Query: 107 DVY-----AAPDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + L F F L ++ V I V + G Sbjct: 62 PLLMVGPRGLERVVNSLRVIAPDLPFPIVFHELKEKEEVLDVCGCRITAFRVNHNITCYG 121 Query: 157 GVIEA-------------------------------IPILQQHGRISSLGFRFG-NVAYC 184 IE +P + R G Y Sbjct: 122 YTIEIDRAGKFDVNKAKENNVEMQYWNRLQKGETIELPDRTLTSDLVLGPSRKGIKCTYT 181 Query: 185 TDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAIL 237 TD +E ++ D I + + H + E+ + + K L Sbjct: 182 TDTRP-TDSIVEHAKDADLFICEGMYGEPEKKAKAVEYKHMTFYEAAEMAKKACVKEMWL 240 Query: 238 THMHVDL 244 TH L Sbjct: 241 THYSPSL 247 >gi|255994162|ref|ZP_05427297.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] gi|255993830|gb|EEU03919.1| metallo-beta-lactamase family protein [Eubacterium saphenum ATCC 49989] Length = 603 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 50/207 (24%) Query: 52 SNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F + + E I +++TH H DHI + Sbjct: 77 EDDILILDCGMSFPDEGMHGIDVVIPDFSYVLENKKKIKGIIFTHGHEDHIGAVP----- 131 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ +YA + F + + I E + + K G Sbjct: 132 YLFKQASFPLYATHLTKGLIENKF--------------VEHGIKKEITPIKVGQKVRVGK 177 Query: 159 IEAIPILQQHGRISSLGFRFG------------NVAYCT-DVNAFPAESLEKL--QNLDF 203 PI H SL F + Y D L L + +D Sbjct: 178 FVIDPIRITHSIADSLCFEIKTPEHTIFHTGDFKIDYTPIDGEPIDLAKLAMLGAKGVDI 237 Query: 204 LIID---ALKNGLHSSHFSLSESLKKI 227 L+ D A ++G S + +++++I Sbjct: 238 LLADSTNATRSGFTDSEQKVGQTMERI 264 >gi|171685606|ref|XP_001907744.1| hypothetical protein [Podospora anserina S mat+] gi|170942764|emb|CAP68417.1| unnamed protein product [Podospora anserina S mat+] Length = 1030 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 81/295 (27%), Gaps = 65/295 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R S+ I + + + D G + Sbjct: 610 EIIPLGTGSAL----------------PSKYRNVSATLIRVPG----HGSYLFDCGENTL 649 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADH--------------IHGIDGLRGYFLKQK 103 Q+ R E + + A+ +H HADH G D L G Sbjct: 650 GQLRRLYGNEDTDEVLKDLRAIYISHLHADHHFGTASMMARWNKVTAGTDALLGVIATGG 709 Query: 104 RPIDVYAAPDC------MKHLFESFRYCFKALD---DRTYPPIVNPIVIENNDVPICMKS 154 + + + Y + +PP +N Sbjct: 710 --FHSWMLEYDGVEPLGLDRVVGIVPYRGGQPNADLGWKFPPTLNQSECNTMQERFPKVE 767 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFL-----IIDA 208 V + G + AY D P++ +L + L D Sbjct: 768 ICWVDHCQNATAIVMTFAPSGLKI---AYSGDCR--PSKKFAELGKGAHLLLHECTFEDG 822 Query: 209 LK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 LK + + H ++SE+L + + +LTH + +V D Sbjct: 823 LKGDAVAKKHSTISEALAVGRDMGARRILLTHFSQRYPKLPAPEGEGEKVELGKD 877 >gi|198435618|ref|XP_002127104.1| PREDICTED: similar to Bacterially-derived sulfatase required for use of alkyl- and aryl-sulfates as sulfur sources; Bds1p [Ciona intestinalis] Length = 588 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 84/241 (34%), Gaps = 49/241 (20%) Query: 50 RGSNTTVIVDT--GPDFYMQVLRE--QVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 G + +IVD+ GP+ ++VL + I A+L TH HADH G+D + + Sbjct: 75 EGRDGIIIVDSTLGPESALKVLAAFRNITDKPIKAILVTHFHADHTGGLDAVLQ---TVE 131 Query: 104 RPIDVYAAPDCMKHLFESF-----------RYCFKALDDRTYP--PIVNPIVIENNDVPI 150 + IDVY+ L ESF R L P D + Sbjct: 132 KGIDVYSHKLTKDQLSESFLTRQGATERTSRQFGMKLPSSKVPNFTFTAVHPTHTFDKEL 191 Query: 151 CMKSAGGVIEAIPIL---QQHGRI--SSLGFRFG-NVAYCTDVNAFPAESLEKLQNLDFL 204 + AG I+ H I G F + Y + N +P +++ + Sbjct: 192 TLNIAGVKIQLFHTPGETNDHCSIWLPDKGVLFSADNLYSSFPNIYP--VRGEIREVRQW 249 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK---STPSRVVPAF 261 + ESL I + P+ + +HM + D V K + + + Sbjct: 250 V----------------ESLDFIRYLKPEYLVPSHMDPVIGKDEVWKTITTYRDAMQFVY 293 Query: 262 D 262 D Sbjct: 294 D 294 >gi|195978357|ref|YP_002123601.1| ribonuclease Z [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|254808667|sp|B4U3M1|RNZ_STREM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|195975062|gb|ACG62588.1| ribonuclease Z Rnz [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 309 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKHRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + +++ +++Y ++ Sbjct: 43 QRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLEIYGPVGIKSYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + P ++ ++ + +++ H I +G+R Sbjct: 103 TNSIR-----ISGSKLPYQIHYHEFDDTSMGKILET--DKFTVYAERLAH-TIFCMGYRV 154 >gi|313680574|ref|YP_004058313.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] gi|313153289|gb|ADR37140.1| RNA-metabolising metallo-beta-lactamase [Oceanithermus profundus DSM 14977] Length = 571 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 63/193 (32%), Gaps = 24/193 (12%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF---ES 121 + L E I + TH H DHI G+ + L Q I +Y A + L E Sbjct: 77 RIDYLVENAGLIKGWVLTHGHEDHIGGM----PFLLPQLPKIPLYGAKLTLGLLRGKLEE 132 Query: 122 FRYCFKALDDRTYPP-----IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F D P I ++ + + G+I P+ G + G Sbjct: 133 FGLKPGEFDLNVVSPDETLKIGRHFTVDLFRMTHSIPDNSGLIIRTPV----GNVVHTGD 188 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 F+ V+ + + + LI D A + G+ S ++ +L Sbjct: 189 FKLDPTPVDGKVSHLAKVAQAGAEGVLLLIADSTNAERPGITPSEAEVAVALDAAIGAAE 248 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 249 GRVFVTTFASHIH 261 >gi|302546060|ref|ZP_07298402.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces hygroscopicus ATCC 53653] gi|302463678|gb|EFL26771.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces himastatinicus ATCC 53653] Length = 400 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR AC R ++L I + +++D P Sbjct: 1 MELTLLGTGAPDGLPRHGCPCAACATAVGDEARAATALLI--------DGALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPHA 86 R ++ + VL +HPHA Sbjct: 53 AFAAARAGYSLVGVRQVLLSHPHA 76 >gi|254469697|ref|ZP_05083102.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062] gi|211961532|gb|EEA96727.1| metallo-beta-lactamase family protein [Pseudovibrio sp. JE062] Length = 555 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 75/222 (33%), Gaps = 48/222 (21%) Query: 48 SERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +IVD G PD L E+ ID ++ TH H DH + Sbjct: 28 GPEDDRRWLIVDFGVSFAGPEMPGVDLVLPDIR--FLEEERSRIDGIVITHAHEDHYGAL 85 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 +L ++ + VYA P + L D Y + V+ D Sbjct: 86 S-----YLWKRLELPVYATPFTARLLEAKL-----IGDGADY--QIPVTVVNQGD---RF 130 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGN--VAYCTD---------VNAFPAESLEKL--Q 199 K+ IE + + +L R G V + D A + L +L + Sbjct: 131 KAGIFDIELVTMTHSIPEPCALAIRIGGQLVLHSGDWKIDLTPGVGKAIDLQRLRELGDE 190 Query: 200 NLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +D + D A+++G+ S + E L +I P +T Sbjct: 191 GVDVFVCDSTNAVRDGVSPSEADVKEELTRIIKEAPNRVAVT 232 >gi|167040716|ref|YP_001663701.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X514] gi|256752149|ref|ZP_05493015.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914756|ref|ZP_07132072.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307724010|ref|YP_003903761.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] gi|166854956|gb|ABY93365.1| beta-lactamase domain protein [Thermoanaerobacter sp. X514] gi|256748963|gb|EEU62001.1| beta-lactamase domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889691|gb|EFK84837.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X561] gi|307581071|gb|ADN54470.1| beta-lactamase domain-containing protein [Thermoanaerobacter sp. X513] Length = 240 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 79/228 (34%), Gaps = 33/228 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----- 103 NT +++D G + R + + ++ +H H+DH+ + LR K Sbjct: 25 EDENTHILLDCGSGVISRYQRYYDLNKLKYIILSHLHSDHVADMMVLRYALDIMKSRGMI 84 Query: 104 -RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P++VY +++FE F+ + + N +I + + G I Sbjct: 85 TEPVNVYCPQ-TPENVFEDFK----------FKDVFNLHII---NEEATLNLEGIEIS-- 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSH 217 + + + + Y D + + + D + D L G+ H Sbjct: 129 -FKKMTHPVETYAVKIKKGEKIFVYSGDT-TYNEDLISFANKADLFLCDGNLLTGMQGPH 186 Query: 218 FSLSESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 + +E+ + + K +LTH+ + DY + A D Sbjct: 187 LTAAEAAEIAKKAECKRLVLTHLSPFISIKDYYDEAIKVFGNIEIARD 234 >gi|119719728|ref|YP_920223.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119524848|gb|ABL78220.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 256 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 69/251 (27%), Gaps = 55/251 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG S R SL + + V++D Sbjct: 11 RVIFLGTAGST----------------FSGRNMPPSLLV--------DGGVLLDCPAACP 46 Query: 66 MQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESF 122 + + + +L +H H DH G+ L + + ++V F Sbjct: 47 YVLATMGRLDEVRIILLSHLHPDHSLGVVELLWHLWIRGSGKRVEVVGPRGT-----RRF 101 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--- 179 F+ + + +P I+ I G A H + +L +R Sbjct: 102 ---FERMLEVLHPEKFETILSHGVFREIGPGDTVG--NAKAFEALH-TVEALAYRLTVSD 155 Query: 180 -NVAYCTDVNAFPAESLEKLQNLDFLI---------IDALKNGLHSSHFSLSESLKKIEL 229 ++ Y D + + +E D L+ DA HS+ + Sbjct: 156 RSLCYSGDTSP-SEKLVEGFAGCDLLVHEATYPPGMEDAALRDGHSTPVH---AATIALR 211 Query: 230 INPKNAILTHM 240 + L H+ Sbjct: 212 AGARRLALVHL 222 >gi|119505653|ref|ZP_01627723.1| beta-lactamase-like protein [marine gamma proteobacterium HTCC2080] gi|119458465|gb|EAW39570.1| beta-lactamase-like protein [marine gamma proteobacterium HTCC2080] Length = 266 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 70/221 (31%), Gaps = 53/221 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-----IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T V+VD G R + L+ IDA++ TH H DH G+ + Sbjct: 18 SDGETLVLVDCGFPRRETERRLERLNVAAEDIDAIIVTHEHGDHSGGV-----ASFSRHY 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 VY + ++I D G + A+ + Sbjct: 73 KTPVYLTHGTANS--------------GRLSGVFQQVLINAGD-----DFTIGSVHALAV 113 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + F+ + TD+ + +E D L+ ++ L G + Sbjct: 114 PVPHDAREPVQFKLEASGNTLGLLTDLGSITPHLVEAFSGCDALLLEFNHDLELLMQGAY 173 Query: 215 SS-----------HFSLSESLKKIELINPKNA-ILT--HMH 241 + H + +++ + ++ ++ + +L H+ Sbjct: 174 PASLKRRVAGDFGHLNNTQAGELLQRLDNRRLKVLVAGHLS 214 >gi|209885312|ref|YP_002289169.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Oligotropha carboxidovorans OM5] gi|209873508|gb|ACI93304.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Oligotropha carboxidovorans OM5] Length = 274 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 83/253 (32%), Gaps = 39/253 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V R T+I D G + L ++ ID + +H H DH+ G+ + + Sbjct: 32 SCVEVRCGGHTLIFDAGSGLRGLGEALAGKMDEID-LFLSHLHIDHLIGLPFFQP-AFEP 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 R + ++A L E+ ++P + + ++ + G + Sbjct: 90 GRRLRLWA-----AGLEEAGGLRAAIGCYMSFPLFPIGLDALHANITFNDFTRGETLTPR 144 Query: 163 PIL------QQHGRISSLGFR--FGN--VAYCTDVNAFPA---ESLEKLQNLDFLIIDA- 208 P L H + G+R FG + Y TD P L + D L++DA Sbjct: 145 PGLTLRTAALDHPG-GATGYRLEFGGRAICYITDTAMSPETMPAILALARGADCLVMDAT 203 Query: 209 -----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV--------LKSTPS 255 L H S +++ K L H ++D Sbjct: 204 YTDAELVQFAGWGHASWQQNVAFANAAAVKTLCL--FHHAPEHDDAAMDRIAQEADRARR 261 Query: 256 RVVPAFDGMQFSS 268 + A +G+ + Sbjct: 262 GTIVAHEGLSLTF 274 >gi|148555214|ref|YP_001262796.1| beta-lactamase domain-containing protein [Sphingomonas wittichii RW1] gi|148500404|gb|ABQ68658.1| beta-lactamase domain protein [Sphingomonas wittichii RW1] Length = 337 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 12/168 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--ID 107 + ++D G ++ R + +I +V TH HADH+ + Q R + Sbjct: 67 GDAVYLIDCGYGACERISRAGLSVAAIGSVFITHNHADHLLDYGSFLFFSWLQGRRDELR 126 Query: 108 VYAAPDCM---KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 VY P L + + + P + P+ ++ + V + Sbjct: 127 VYGPPPLRKITDDLLSANALPLHYYKEDMHSPPMPPVRVDEISAAGPVMQDDRVRVRSVV 186 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + +L +RF +V + D + + + D L+ +A Sbjct: 187 VHHPPVEPALAYRFDTADRSVVFSGDTSP-SDALIGLARGADILVHEA 233 >gi|21221006|ref|NP_626785.1| ribonuclease Z [Streptomyces coelicolor A3(2)] gi|41017584|sp|Q9RDE4|RNZ_STRCO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|6714761|emb|CAB66225.1| putative hydrolase [Streptomyces coelicolor A3(2)] Length = 301 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 82/289 (28%), Gaps = 73/289 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGILFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCM 115 G Q+LR V ++ + TH H DH G+ G+ + P Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGV--IQRINLDRVPHEITAHYPRSG 96 Query: 116 KHLFESFRYCFKALDDRT---------YPPIVNP-IVIENNDVPICMKSAGGVIEAIPIL 165 + FE RY + P V P ++ + ++S G + Sbjct: 97 QRFFERLRYATAYRETVALTEVPVAADGPLAVTPAYTLDARRLSHPVESYGYRLTEPDGR 156 Query: 166 QQ-------HG----------RISSLGF----------RFGNVAYCTDVNAFPAESLEKL 198 + HG R SLG R A+ D Sbjct: 157 RMLPERLAAHGITGPDVGRIQRDGSLGGVALDEVSEVRRGQRFAFVMDT-RLCEGVHALA 215 Query: 199 QNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 ++ D L+I++ + H + ++ + ++ +LTH Sbjct: 216 EDSDLLVIESTFLDEDETLATDHGHLTAGQAARVARDAGVRHLVLTHFS 264 >gi|307295742|ref|ZP_07575575.1| beta-lactamase domain protein [Sphingobium chlorophenolicum L-1] gi|22417106|gb|AAM96669.1| putative arylsulfatase precursor [Sphingobium chlorophenolicum L-1] gi|306878398|gb|EFN09619.1| beta-lactamase domain protein [Sphingobium chlorophenolicum L-1] Length = 325 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 79/313 (25%) Query: 6 HFTILGCGASLG-VPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG + G +PR+ R +S + ++D G Sbjct: 28 RLVLLGT--AGGPIPRL-------------ERSQPASAIVV------GGRIYLIDAGDGL 66 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 Q+ + + S+ A+ TH H DHI + L + L P+++Y P + Sbjct: 67 LRQMAGGKLGLPSVKALFLTHHHIDHIADVPALMIDRWLLANAPPLEIYGPPGSAGLVSG 126 Query: 121 SFRYCFKALDDRTY-------PPIVNPIVIENNDVPI---CMKSAGGVIEAIPILQQHGR 170 + F+ ++ PP+ + + + + A ++ + I H Sbjct: 127 TLS-AFRPVELAPVTIGGPPKPPLARAAIGHDLPADLNEPRLVYADDLVRVLAIGVDHYH 185 Query: 171 I----------SSLGFRF--GNVAYCTDVNAFPAESLEKL-QNLDFLIIDA--------- 208 S +R G Y + P+E L+ L ++ D+L+ + Sbjct: 186 YAPGSPEARASRSYAYRVEAGGKVYVFSGDTGPSERLKILAKDADYLVCEVIDIARMEKL 245 Query: 209 LKNGLHSS--------------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP 254 L+ S H + + + + K +LTH D + L+S Sbjct: 246 LRAFPGFSADQIPSLMEHMQADHLTGEQIGEIAAAAHVKKLVLTHFAPGADGETGLQSYS 305 Query: 255 SRV------VPAF 261 + A+ Sbjct: 306 EGISKHFHGEVAY 318 >gi|332039271|gb|EGI75684.1| cyclic-AMP phosphodiesterase [Hylemonella gracilis ATCC 19624] Length = 281 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 29/158 (18%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM----QVLREQVLSIDAVLYTH 83 C + RT +S I +T ++VD G ++LR ID V TH Sbjct: 8 CSGAIARGSRT-TSFLI--------DTDILVDAGTGVGDLTVGEMLR-----IDHVFITH 53 Query: 84 PHADHIHGIDGLRGYFL-KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----PIV 138 H DHI + + ++++P+ V+A P ++ + D P P + Sbjct: 54 AHLDHITALPLMLDAMGARRRQPVMVHALPQTIEAMRAHIFNNLIWPDFSRIPSEAAPFM 113 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 IE +V ++ G IEA+P + ++G+ Sbjct: 114 RFAPIETGEV---VEIGGRRIEALPAQH---TVPAVGY 145 >gi|15605069|ref|NP_219853.1| ribonuclease Z [Chlamydia trachomatis D/UW-3/CX] gi|76789072|ref|YP_328158.1| ribonuclease Z [Chlamydia trachomatis A/HAR-13] gi|237802771|ref|YP_002887965.1| ribonuclease Z [Chlamydia trachomatis B/Jali20/OT] gi|237804693|ref|YP_002888847.1| ribonuclease Z [Chlamydia trachomatis B/TZ1A828/OT] gi|255311151|ref|ZP_05353721.1| ribonuclease Z [Chlamydia trachomatis 6276] gi|255317452|ref|ZP_05358698.1| ribonuclease Z [Chlamydia trachomatis 6276s] gi|41017523|sp|O84350|RNZ_CHLTR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|123606951|sp|Q3KM12|RNZ_CHLTA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|3328767|gb|AAC67941.1| Sulphohydrolase/Glycosulfatase [Chlamydia trachomatis D/UW-3/CX] gi|76167602|gb|AAX50610.1| metal-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|231272993|emb|CAX09905.1| Ribonuclease Z [Chlamydia trachomatis B/TZ1A828/OT] gi|231274005|emb|CAX10798.1| Ribonuclease Z [Chlamydia trachomatis B/Jali20/OT] gi|296435865|gb|ADH18039.1| ribonuclease Z [Chlamydia trachomatis G/9768] gi|296436791|gb|ADH18961.1| ribonuclease Z [Chlamydia trachomatis G/11222] gi|296437725|gb|ADH19886.1| ribonuclease Z [Chlamydia trachomatis G/11074] gi|297140224|gb|ADH96982.1| ribonuclease Z [Chlamydia trachomatis G/9301] gi|297748476|gb|ADI51022.1| Ribonuclease Z [Chlamydia trachomatis D-EC] gi|297749356|gb|ADI52034.1| Ribonuclease Z [Chlamydia trachomatis D-LC] Length = 304 Score = 53.2 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 81/294 (27%), Gaps = 90/294 (30%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 TILG C P R + + R + ++ D G Sbjct: 6 LTILG----------------CSSQQPTRHRNHGAYLL-----RWNGEGLLFDPGEGTQR 44 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLRG-YFL-KQKRPIDVYAAPDCMKHLFESF 122 Q + + + + +H H DH G+ + L + PI Y K+ F+ Sbjct: 45 QFIYANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDRVLHPIHCYYPASGKKY-FDRL 103 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---- 178 RY + VIE+ + G H + +LG+R Sbjct: 104 RYSTIYHETIK--------VIEHPIDREGIVEDFGNFRIESRQLDH-LVDTLGWRITEPD 154 Query: 179 -------------------------------GNVAYCTDVN-------------AFP-AE 193 + + DV+ + P Sbjct: 155 TTKFIPEKIKAAGLKGPIMQELINKGQVKVNDTIVHLDDVSYTRKGDSIAVVADSLPCQA 214 Query: 194 SLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 ++ +N L+ ++ H H + ++ ++ + + ILTH Sbjct: 215 IVDLARNARILLCESTYLEEHSHLAKSHYHMTAKQAAEQAKRAEVQQLILTHFS 268 >gi|227830151|ref|YP_002831930.1| ribonuclease Z [Sulfolobus islandicus L.S.2.15] gi|259494142|sp|C3MPH2|RNZ_SULIL RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|227456598|gb|ACP35285.1| ribonuclease Z [Sulfolobus islandicus L.S.2.15] Length = 291 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 92/295 (31%), Gaps = 73/295 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R + + R +++D G Sbjct: 2 IQIFFLGTGAGS----------------PSKKRKLPAFLVRR-----EGLNILLDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++ + SI + TH H DH+ G+ G+ L +K + + D L+ Sbjct: 41 QYTLMNNKLGINSIKIIGITHMHGDHVFGLLGVIASMGLLDRKETLYILGPRDLKDFLYT 100 Query: 121 SFRY-----CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-------------- 161 SF Y FK Y I I ++S G +I Sbjct: 101 SFEYSKFNPSFKIEFIDNY--NDQNITIATFKTCHTVESQGYLISERDRVKIDEEKLEKE 158 Query: 162 ------IPILQQHGRISSLGFRF------------GNVAYCTDVNAFP-AESLEKLQNLD 202 + + G+ +F VAY D P +E ++ D Sbjct: 159 KIKDWRVMRKLKEGKTVEYNGKFLKPEDYLVIKRGLKVAYTGDT--IPCQSVIESVKGAD 216 Query: 203 FLIIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 LI D+ S+ H +++++ K + K LTH+ Y+ V + Sbjct: 217 LLIHDSTFLNEPSAFTYGHSNVADAAKVALEASVKLLALTHISPR--YEDVTEHL 269 >gi|169828892|ref|YP_001699050.1| ribonuclease Z [Lysinibacillus sphaericus C3-41] gi|168993380|gb|ACA40920.1| Ribonuclease Z [Lysinibacillus sphaericus C3-41] Length = 313 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 35/179 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG GA G+P + +S + ++ + S + D G Sbjct: 5 QLHFLGTGA--GMPS---------------KERNTSALMVKLLDEISEM-WLFDCGEATQ 46 Query: 66 MQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLFE 120 Q+L + + + TH H DHI G+ G R + P+ ++ + + + Sbjct: 47 HQILHTSLKPRKVSKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIFGPVGLQQWIEQ 105 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +F + TYP +E + + + +H + G+R Sbjct: 106 TFA---LSKTHLTYP----LHFVEVQEGIVYEDAC---FTVYAKELRH-VVPCYGYRIE 153 >gi|194217707|ref|XP_001503380.2| PREDICTED: similar to ELAC2 [Equus caballus] Length = 820 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 106/303 (34%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ S+ ++++D G Sbjct: 469 SQYPEIIFLGTGSAI----------------PMKIRNVSSTLVNISSD----KSLLLDCG 508 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPI 106 + Q+ R +D AV +H HADH G+ + ++ P+ Sbjct: 509 EGTFGQLCRHYGDDVDRVLGALAAVFVSHLHADHHTGLLNIL-LQRERALASLGEPFHPL 567 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPI------VNPIVIENNDVPICMKSAGGVIE 160 V A L + C + L + P E + + A + E Sbjct: 568 LVVAPTQLRAWLQKYHNQCQQILHHVSMIPAKCLQKGAEVCSPEVERLISTLLGACDLEE 627 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P E+L ++ ++ LI D Sbjct: 628 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLED 682 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N + +L H Y + +P +V AFD Sbjct: 683 GLEEEAVEKTHSTTSQAISVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNDKVGIAFDH 740 Query: 264 MQF 266 M+ Sbjct: 741 MKV 743 >gi|302780946|ref|XP_002972247.1| hypothetical protein SELMODRAFT_97243 [Selaginella moellendorffii] gi|300159714|gb|EFJ26333.1| hypothetical protein SELMODRAFT_97243 [Selaginella moellendorffii] Length = 825 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + LG G+S P R S++ + + G +++D G Sbjct: 474 RKEVELIFLGTGSSQ----------------PSTYRNVSAIYVHLFANGG----MLLDCG 513 Query: 62 PDFYMQVLR-EQVLSIDAVL-------YTHPHADHIHGIDGLRGY 98 Y Q+LR +V D+V+ +H HADH G+ + Sbjct: 514 EGTYGQLLRRYRVFRTDSVVAGLRLIWISHIHADHHGGLSRILSV 558 >gi|315501860|ref|YP_004080747.1| beta-lactamase domain-containing protein [Micromonospora sp. L5] gi|315408479|gb|ADU06596.1| beta-lactamase domain-containing protein [Micromonospora sp. L5] Length = 209 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 29/165 (17%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DAVL TH H DH+ + +RP+ V+ L ++ ++ Sbjct: 37 DAVLITHEHPDHV----DVAALTRALERRPVPVHGPASLAGVLGDAAEALVTVEPGQS-- 90 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAES 194 + P+ + I I ++G+ F +V Y D P + Sbjct: 91 -------LTVAGTPVRTYGGQHAVIHPDIPV----IQNIGYLFADVVYHPGDALFVPDDV 139 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +D L +H+ SE L I + P+ A H Sbjct: 140 Q----------VDTLFAPIHAPWSKFSEVLDFIRAVAPRRAYALH 174 >gi|262404993|ref|ZP_06081545.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC586] gi|262348832|gb|EEY97973.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. RC586] Length = 438 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 KQ +Y + Sbjct: 70 LAAGFKQ----PIYCTAATAE 86 >gi|229524785|ref|ZP_04414190.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae bv. albensis VL426] gi|229338366|gb|EEO03383.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae bv. albensis VL426] Length = 438 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 KQ +Y + Sbjct: 70 LAAGFKQ----PIYCTAATAE 86 >gi|148678452|gb|EDL10399.1| elaC homolog 2 (E. coli), isoform CRA_b [Mus musculus] Length = 456 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 106/302 (35%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 106 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 145 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 146 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 205 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 206 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 265 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 266 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 320 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N + +L H Y + +P +V AFD M Sbjct: 321 LEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 378 Query: 265 QF 266 + Sbjct: 379 KV 380 >gi|11992379|gb|AAG24918.2|AF308696_1 ELAC2 [Mus musculus] Length = 831 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 105/302 (34%), Gaps = 64/302 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ + +V++D G Sbjct: 474 SQYPEIVFLGTGSAI----------------PMKIRNVSSTLVNL----SPDKSVLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGI-------DGLRGYFLKQKRPID 107 + Q+ R ID AV +H HADH G+ + K +P+ Sbjct: 514 EGTFGQLCRHYGQQIDRVLCSLTAVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLL 573 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKSAGGVI---EA 161 V A L + +C + L + P + + N + + E Sbjct: 574 VVAPTQLRAWLQQYHNHCQEILHHVSMIPAKCLQKGAEVSNTTLERLISLLLETCDLEEF 633 Query: 162 IPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDA 208 L +H + + S G++ V Y D P E+L ++ ++ LI D Sbjct: 634 QTCLVRHCKHAFGCALVHSSGWK---VVYSGDT--MPCEALVQMGKDATLLIHEATLEDG 688 Query: 209 LKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGM 264 L+ +H + S+++ +N +L H Y + +P +V AFD M Sbjct: 689 LEEEAVEKTHSTTSQAINVGMRMNAGFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHM 746 Query: 265 QF 266 + Sbjct: 747 KV 748 >gi|317495833|ref|ZP_07954196.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316914010|gb|EFV35493.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 209 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 64/173 (36%), Gaps = 14/173 (8%) Query: 52 SNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++ +I+D G F + + E + I+A+L TH H DHI +D R Y+ + VY Sbjct: 24 NDRGLIIDPGEGFEKIQKAVEELGVKIEAILLTHAHFDHIMSLDECRKYY-----KVPVY 78 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 +P + + S + R + + + AG +P Sbjct: 79 ISP--YERDWLSNPDFNGSTMFRLRRAPMTEAAEFEFEENKKYELAGMSFTVLPTPGHSP 136 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S F FG D L DF +ALKN LH+ F L E Sbjct: 137 GGVS--FDFGKFIIVGDALFRSGFGRYDLYGSDF---NALKNSLHNVLFKLDE 184 >gi|167754812|ref|ZP_02426939.1| hypothetical protein CLORAM_00316 [Clostridium ramosum DSM 1402] gi|237735453|ref|ZP_04565934.1| beta-lactamase [Mollicutes bacterium D7] gi|167704862|gb|EDS19441.1| hypothetical protein CLORAM_00316 [Clostridium ramosum DSM 1402] gi|229381198|gb|EEO31289.1| beta-lactamase [Coprobacillus sp. D7] Length = 249 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 63/221 (28%) Query: 51 GSNTTVIVDTGPDFYMQVL------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G Q+L Q +I+ VL TH H DH + Sbjct: 19 DNGVGILIDCGI-ARKQLLYKLGNLGFQESNINYVLLTHDHYDH--------------NK 63 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I ++ + + + C K +D +++ E +P+ Sbjct: 64 NISIF-----DQRICFCGKGCIKGIDSS-------------HEIKPYKSFQLAHFEIMPL 105 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------ 208 H S L F ++ Y TD ++ + L NLD+ II++ Sbjct: 106 SISHDATSPLAFIITGVNESILYMTDTGYVSQKNRKYLNNLDYYIIESNHDVEMLMATKR 165 Query: 209 ---LKNGLHS--SHFSLSESLKKIELI---NPKNAILTHMH 241 LK +H H + S K + + K +L H+ Sbjct: 166 PYFLKQRIHGDLGHLNNEYSAKMMVELIGDKTKEIVLAHLS 206 >gi|254286264|ref|ZP_04961223.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|150423679|gb|EDN15621.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 438 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 KQ +Y + Sbjct: 70 LAAGFKQ----PIYCTAATAE 86 >gi|115803294|ref|XP_799331.2| PREDICTED: similar to Im:7145112 protein, partial [Strongylocentrotus purpuratus] gi|115968516|ref|XP_001184011.1| PREDICTED: similar to Im:7145112 protein, partial [Strongylocentrotus purpuratus] Length = 615 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 95/294 (32%), Gaps = 62/294 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ N+ S + SE N ++I+D G + Sbjct: 350 EVVFLGTGSAM-----------------PNKARNVSGILLNFSE---NKSMIMDCGEGTF 389 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGI-------------DGLRGYFLKQK-R 104 Q+ R +D + +H HADH G+ D + + Sbjct: 390 GQLCRYYGDKVDDVMASIQCIFISHIHADHHAGLINLLKHWKRVTKSDDSGNNLILIGPK 449 Query: 105 PIDVYA---APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ++ C + + F L D E + + + Sbjct: 450 RMFIWLNLFDQHCESFIHRT---RFVELADLNINQQGERSRHEASLLSRFNLKEFNTVYV 506 Query: 162 IPILQQHGRISSL--GFRFGNVAYCTDVNAFP-AESLEKLQNLDFLI-----IDALKNGL 213 +G + G++ + Y D P ++ + D LI D ++ Sbjct: 507 RHCANAYGVTLTHQDGWK---MVYSGDT--MPCDNLIKAGKGADLLIHEATLEDGMEEEA 561 Query: 214 HSS-HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRVVPAFDGMQ 265 H +S++++ + + K +LTH ++ S+ S++ AFD M+ Sbjct: 562 KKKRHSMISQAIEVGQSMEAKFLLLTHFSQRYPKVPLIETSSTSKIGIAFDNMR 615 >gi|226322516|ref|ZP_03798034.1| hypothetical protein COPCOM_00287 [Coprococcus comes ATCC 27758] gi|225209133|gb|EEG91487.1| hypothetical protein COPCOM_00287 [Coprococcus comes ATCC 27758] Length = 302 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 85/298 (28%), Gaps = 84/298 (28%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + + +++D G + L+E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTALMTRYNGSQLLIDCGEGTQI-ALKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +K P+ + ++ + S R L E + + G Sbjct: 78 GNADRKEPLTLIGPKG-LERVVSSLRVIAPELP-------FEIHYREITEPEQIFEMDGY 129 Query: 158 VIEAIPILQQHGRISSLGFRFG-------------------------------------- 179 ++A +H + G+ Sbjct: 130 RLKA--FRVKH-NVICYGYTIEIDRAGKFDVQRATEQKIPKEYWKHLQKGETVELDGRIL 186 Query: 180 -------------NVAYCTDVNAFPAESLEK-LQNLDFLIIDALKNGLHS-------SHF 218 + YCTD P +S+ K + D I + + H Sbjct: 187 TPEMVLGPPRRGIKLTYCTDTR--PTDSIRKNAKGSDLFICEGMYGEKEKAAKAVEYKHM 244 Query: 219 SLSESLKKIELINPKNAILTHMHVDLDY-----DMVLKSTPSRVVPAFDGMQFSSPIP 271 + E+ + LTH L + D V P + D M P Sbjct: 245 TFYEAANLAKEAEVGEMWLTHYSPSLRHPEEYMDEVRAIFP-HAIAGKDRMTTELDFP 301 >gi|319781204|ref|YP_004140680.1| hypothetical protein Mesci_1471 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167092|gb|ADV10630.1| hypothetical protein Mesci_1471 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 388 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 37/187 (19%) Query: 39 RSSLKISRVSERGSNTTVIVD-------TGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 R+SL +S +++D +G D+Y L V IDA+ +H H DH+ Sbjct: 14 RTSLAVS-----SGKDRILLDVGIKVGASGADYYP-ALNGSVADIDALFVSHAHEDHVGA 67 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIENNDV-- 148 + + L + ++ + + + D R +P P + E D Sbjct: 68 L----SWLLSRGYAGPIFMTAETRDEAPATLAGYAEPEDFRRFPFPEDRIELFEPGDTLN 123 Query: 149 ----PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE---SLEKLQNL 201 I +G V+ + G VAY DV P ++ + + Sbjct: 124 SGNLTIRTGRSGHVVGGVWFAVDDGE--------SRVAYSADV--VPDSNVFVMDTIPHC 173 Query: 202 DFLIIDA 208 D L++DA Sbjct: 174 DLLVLDA 180 >gi|302804819|ref|XP_002984161.1| hypothetical protein SELMODRAFT_40701 [Selaginella moellendorffii] gi|300148010|gb|EFJ14671.1| hypothetical protein SELMODRAFT_40701 [Selaginella moellendorffii] Length = 789 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + LG G+S P R S++ + + G +++D G Sbjct: 442 RKEVELIFLGTGSSQ----------------PSTYRNVSAIYVHLFANGG----MLLDCG 481 Query: 62 PDFYMQVLR-EQVLSIDAVL-------YTHPHADHIHGIDGLRGY 98 Y Q+LR +V D+V+ +H HADH G+ + Sbjct: 482 EGTYGQLLRRYRVFRTDSVVAGLRLIWISHIHADHHGGLSRILSV 526 >gi|228957990|ref|ZP_04119727.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801697|gb|EEM48577.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 564 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|126733300|ref|ZP_01749047.1| beta-lactamase-like protein [Roseobacter sp. CCS2] gi|126716166|gb|EBA13030.1| beta-lactamase-like protein [Roseobacter sp. CCS2] Length = 294 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 84/272 (30%), Gaps = 52/272 (19%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL 95 +S+ + + T+++D G + + + ID ++ TH H+DH L Sbjct: 34 MPTSMLLKLA-----DKTILIDAGLGVTRGICDQGTALTQIDLIVITHLHSDHYL---EL 85 Query: 96 RGYFLKQK-----RPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDV 148 +F R I V P + + F F + + + V Sbjct: 86 GPFFHTAWTAGLNRTIPVIG-PTGLDAYWTGFQDSMRFDIDLRVRDEGRCDFNGLADIQV 144 Query: 149 PICMKSAGGVIEAIPILQQHGRIS-SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDF 203 I + G I + H I+ + RF + D P ++ + D Sbjct: 145 -IQDQMTFGDIIMHSMRNLHPPITDTFALRFETGGKAIVISGDTAYMPEMAV-FAKGADL 202 Query: 204 LIIDA-------------------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 L+ +A L+ + SH ++ + + K L H D Sbjct: 203 LVHEAMLRDGVEALCARMTNGDERLRTHILRSHTDAADVGRIAKDAGVKQLALNHFVPDG 262 Query: 245 DYDMVLKSTPSRVV--------PAFDGMQFSS 268 D D + + V DGM+ + Sbjct: 263 DPDFTDQHWEAEVRKHWDGPLWLGKDGMKITL 294 >gi|256844229|ref|ZP_05549715.1| beta-lactamase [Lactobacillus crispatus 125-2-CHN] gi|256613307|gb|EEU18510.1| beta-lactamase [Lactobacillus crispatus 125-2-CHN] Length = 265 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 59/250 (23%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +SL ++ +++D G D +V + ID +H H DH G+ Sbjct: 13 NTSLIVT------GQHKILMDAGISGKKTKDLLAEV-GVDINEIDMAFLSHDHTDHSGGL 65 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 G +++ ID +A ++L ++ P IE Sbjct: 66 ----GVLMRRYPKIDAFANSGTWQYLLDT--------KKIGKLPAEQMNTIEPGKTK--- 110 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID- 207 G ++ H + F VA+ TD E +++ D +++ Sbjct: 111 --TFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDTGYVSEEVEGTIEDADAYMMEF 168 Query: 208 -----ALKNGLHS-----------SHFSLSESL-KKIELINP--KNAILTHMHVD----- 243 L++G +S H S E+ ++++ P K+ L H Sbjct: 169 NYDNMMLRDGPYSWALKQRILSDVGHLSNDEAAQALVDVVTPKTKHIFLAHRSQHNNTEY 228 Query: 244 LDYDMVLKST 253 L ++ + Sbjct: 229 LAHETAKEML 238 >gi|311895510|dbj|BAJ27918.1| hypothetical protein KSE_20950 [Kitasatospora setae KM-6054] Length = 252 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 20/201 (9%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGY-FLKQKRPID 107 R V+++ G + R + AVL TH H DH + LR + + + Sbjct: 26 RSPTADVLLECGHGAVGALRRYADPAGLGAVLITHMHPDHCFDLVALRNHRVVHALPRLP 85 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y P+ + S P E + G + + + Sbjct: 86 LYL-PETGPAVLRSLGEALGLGAGYFDPAFEVRTYAEGPAFEV------GGLTVEAVRSR 138 Query: 168 HGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS----HF 218 H + + RF + + + +D FP + E + L+I+ ++ H Sbjct: 139 HNTL-AHAVRFTDPDGARLVFSSDTGWFPGLA-ELAAGAEVLLIEVTDPATPAAGPRWHL 196 Query: 219 SLSESLKKIELINPKNAILTH 239 +++ + I+ P A+LTH Sbjct: 197 CPADAARVIDAARPGLALLTH 217 >gi|308274384|emb|CBX30983.1| hypothetical protein N47_E44950 [uncultured Desulfobacterium sp.] Length = 279 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 74/219 (33%), Gaps = 38/219 (17%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHG------IDGLRGYFLKQ 102 SN +IVD G ++ + + ++TH H DH+ G + R F Sbjct: 35 SNDIIIVDAGTGIRRLGNHLIENNLYKYN-FIFTHAHWDHLMGFPFFKPLYSKRAEFYMH 93 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + P + L + + + ++ + P + G ++ I Sbjct: 94 RCPFH---SKFVETILSKVM----APPNFPVKYSDLKAKIVHIDACPTEFE--IGSVKII 144 Query: 163 PILQQHGRISSLGFRF----GNVAYCTD-------VNAFPAES-LEKLQNLDFLIIDA-- 208 PI H S G++F + TD P +S ++ ++ D LI DA Sbjct: 145 PIPISHPNNGS-GYKFIEDGKTFVFLTDNELGFVHSGGLPMKSYIDFSKDADLLIHDAEY 203 Query: 209 ----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 + + H ++ L K L H++ + Sbjct: 204 TPKEYERKIEWGHSVYTDVLSLAFEAGVKKLGLFHLNQE 242 >gi|254479973|ref|ZP_05093221.1| hypothetical protein GPB2148_3007 [marine gamma proteobacterium HTCC2148] gi|214039535|gb|EEB80194.1| hypothetical protein GPB2148_3007 [marine gamma proteobacterium HTCC2148] Length = 262 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 50/249 (20%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPIDVYAAPDCMKHLF-------E 120 Q +++AV TH H+DH+ G+ +P+ VY K + + Sbjct: 3 FQPGTLEAVFLTHFHSDHVDGLGETGTIRWAGGDNTKPLPVYGPKGIKKVVRGFNLAYSQ 62 Query: 121 SFRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAG---GVIEAIPILQQHGRI-SSLG 175 F Y D P ++ N PI +A G ++ + H + ++G Sbjct: 63 DFTYRHDHHGDTVAPLSGAGLKAMQFNKPPIGELTAVISDGQLKVEALAADHAPVEPAVG 122 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL----HSS----------- 216 +RF ++ D A + +D L+ + L L H + Sbjct: 123 YRFSYKGRSLLITGDTVK-SANIEKFATGVDVLVHEGLAPNLVNMMHDAAVETGNQIMAK 181 Query: 217 --------HFSLSESLKKIELINPKNAILTHM-------HVDLDYDMVLKSTPSRVVPAF 261 H S E+ + + I H+ +L Y + Sbjct: 182 ITHDVLDYHASPVEAAETARDAGVGHLIYYHIVPPLIIPGQELLYLNGAQDIFPNYTLGQ 241 Query: 262 DGMQFSSPI 270 DG+ FS P Sbjct: 242 DGVLFSLPA 250 >gi|326693133|ref|ZP_08230138.1| metal-dependent hydrolase of the beta-lactamase superfamily III(putative) [Leuconostoc argentinum KCTC 3773] Length = 314 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 35/181 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ P R +S+ + + ER N + D G Sbjct: 1 MQLEFLGTGSGQ----------------PSKFRNVTSIALRLLDER--NAVWLFDVGEAT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKR-PIDVYAAPDCMKHL 118 Q+L+ + ++ + +H H DHI G+ G R + K P+ +Y K + Sbjct: 43 QHQILKTTLRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGADKHEPLTIYGP----KGI 98 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + + + R P+V + E + I +H RI + GFR Sbjct: 99 KDFVQTALRVSETRLSYPLVYVELTEG------VIFDDKTFRVIAAKMRH-RIDTWGFRV 151 Query: 179 G 179 Sbjct: 152 E 152 >gi|225017787|ref|ZP_03706979.1| hypothetical protein CLOSTMETH_01716 [Clostridium methylpentosum DSM 5476] gi|224949438|gb|EEG30647.1| hypothetical protein CLOSTMETH_01716 [Clostridium methylpentosum DSM 5476] Length = 233 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 64/218 (29%), Gaps = 52/218 (23%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T +++D G + ++ ID L TH H DH L Y ID Sbjct: 18 SNGQTKLLLDAGIPIRKLQKKCEFNLIGIDGCLVTHCHKDHSAAAQALTRYG------ID 71 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + ++ + V + G +P Q Sbjct: 72 IYTSSGTIQA--------------------CDLSGQHIKPVKAKQSFSVGSFVILPFEVQ 111 Query: 168 HGRISSLGFRF------GNVAYCTDV-------NAFPAESLEKLQNLDFL--------II 206 H LGF + Y TD N E ++ + I Sbjct: 112 HDAPEPLGFLIASPTTEEKLLYFTDTYYLKYNFNGLTHIMGECNYSIPLVRKSVQNGQIP 171 Query: 207 DALKNGLHSSHFSLS---ESLKKIELINPKNAILTHMH 241 +AL L SH SL E L+ +L + L H+ Sbjct: 172 EALAKRLIKSHMSLEHFKEYLQATDLSKVRQIYLLHLS 209 >gi|166154080|ref|YP_001654198.1| Zn-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|166154955|ref|YP_001653210.1| Zn-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335284|ref|ZP_07223528.1| Zn-dependent hydrolase [Chlamydia trachomatis L2tet1] gi|165930068|emb|CAP03551.1| Zn-dependent hydrolase [Chlamydia trachomatis 434/Bu] gi|165930943|emb|CAP06505.1| Zn-dependent hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 262 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 57/229 (24%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G Q + E + S I + TH H+DHI G+ R + + Sbjct: 25 LLIDLG--ISKQAVTEALHSMGIHPEDIQGIFVTHEHSDHIAGL---RSFIKTY--RTPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L + C + + + H Sbjct: 78 ICNIETARSLRQLLDLC-----------------PTFKIFTTGHRFSLEDLRVQTFNVPH 120 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS- 216 + +GF F + +CTD+ + L + D+L+I++ L++ S Sbjct: 121 DAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCDCDYLLIESNHDPEMVLRSSRPESC 180 Query: 217 ---------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S +E ++ + K L H+ L+ + ++ Sbjct: 181 KQRILSKQGHISNAECGALLQRVLTPRIKKIYLAHLS--LECNTAEQAL 227 >gi|329943224|ref|ZP_08291998.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|313848376|emb|CBY17380.1| conserved hypothetical hydrolase [Chlamydophila psittaci RD1] gi|325506743|gb|ADZ18381.1| putative metal-dependent hydrolase [Chlamydophila psittaci 6BC] gi|328814771|gb|EGF84761.1| metallo-beta-lactamase superfamily protein [Chlamydophila psittaci Cal10] gi|328915063|gb|AEB55896.1| vicX protein [Chlamydophila psittaci 6BC] Length = 262 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 51/219 (23%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ +++D G + ++L V I A+ +H H+DHI GI F+K Sbjct: 21 ESSKILIDLGISKQLVTRELLSMNVHPEDIQAIFVSHEHSDHISGIKS----FIKTYN-T 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V + ++L + +++ + ++ Sbjct: 76 PVICNLETARNLCQ----------------LLDVHP-TFKIFSTGTTFSFHDLKIQTFNV 118 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------LKNG 212 H + +GF F + +CTD+ + + +L + D+L+I+A + Sbjct: 119 PHDAVDPVGFIFHYRDEKLGFCTDLGWGTSWIIHELYDCDYLLIEANHDPELVRQSSRPD 178 Query: 213 LHSS-------HFSLSESLKKIELI---NPKNAILTHMH 241 ++ H S E + ++ + K L H+ Sbjct: 179 IYKKRVLSKLGHLSNHECAELLQKVLTPKIKKIYLAHLS 217 >gi|266621256|ref|ZP_06114191.1| metal-dependent hydrolase [Clostridium hathewayi DSM 13479] gi|288867099|gb|EFC99397.1| metal-dependent hydrolase [Clostridium hathewayi DSM 13479] Length = 258 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 79/258 (30%), Gaps = 67/258 (25%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +GCG++ P++ +S I V++D G Y Sbjct: 5 LEFIGCGSAFN-PQLG----------------NTSAYIE-----DGKRFVLLDCGESVYA 42 Query: 67 QVLREQVLSI---DAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESF 122 ++ + VL TH HADH+ + L Y ++ + V + L + Sbjct: 43 RLFELGIFEQYEEIYVLITHTHADHVGSLPSLISYCYYVKQKKVTVIHPNRSLITLLDHM 102 Query: 123 R-----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 Y F+ D +K G ++A + + G+ Sbjct: 103 GIAREAYIFQKPD--------------------LLKLTGFEVKAFSVKHVE-DLKCYGYL 141 Query: 178 F---GNVAYCT-DVNAFPAESLEKL--QNLDFLIIDALKN-GLHSSHFSLSESLKKIELI 230 G Y + D P L++L ++ + D + H SH + + + + Sbjct: 142 ITTYGRTVYYSGDACEVPPAILKRLLEGRIEAVYQDTTEFWTPHLSHCPV----ELLADM 197 Query: 231 NP----KNAILTHMHVDL 244 P K H D Sbjct: 198 VPVEYRKRVYCMHFSNDF 215 >gi|268318625|ref|YP_003292281.1| hypothetical protein FI9785_126 [Lactobacillus johnsonii FI9785] gi|262397000|emb|CAX66014.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus johnsonii FI9785] Length = 265 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 87/259 (33%), Gaps = 65/259 (25%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I +++D G D QV + ID + +H H DH G+ Sbjct: 14 STLIET-----EQHKILMDAGLSGKKTKDLLAQV-GVDIKDIDMIFISHDHTDHSGGL-- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES I N V + N + Sbjct: 66 --GVLMRRYPQISAYANSGTWNYLIES-------------KKIGNLPVEQINTFESGVTK 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--- 207 G ++ H + F A TD + ++++ D +++ Sbjct: 111 TFGDLDVTSFATSHDAAEPQYYVFSSGGKRFACLTDTGYVSSTVKGEIKDADGYLMEFNY 170 Query: 208 ---ALKNGLHS-----------SHFSLSESLK-KIELINP--KNAILTH---------MH 241 L+NG +S H S ++ +++++P KN L H + Sbjct: 171 DDMMLRNGPYSWSLKHRIMSDVGHLSNDQAADTLLDVVSPKTKNIFLAHRSQHNNTQYLA 230 Query: 242 VDLDYDMVL---KSTPSRV 257 + +D+++ + P+ V Sbjct: 231 HETAHDLLVAGDANLPADV 249 >gi|154249577|ref|YP_001410402.1| beta-lactamase domain-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153513|gb|ABS60745.1| beta-lactamase domain protein [Fervidobacterium nodosum Rt17-B1] Length = 278 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G +L ++ ++ + TH H DHI G+ + +++P+ V Sbjct: 21 RILFDAGEGV-ATMLSNKIYAVRHIFLTHGHVDHIAGL--WSIINTRNNAMGDREKPLTV 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y K + F F + + + ++ + KS + P H Sbjct: 78 YYPEG-NKGI--EFYAEFLKRANNDLRFELIFVPVKKGENVFLRKSGSFIRYVQPFQVNH 134 Query: 169 GRIS-SLGFRFGNV------------------------------AYCTDVNAFPAESL-- 195 + G+ +V AY V +++ Sbjct: 135 TYSEVAFGYHVIDVRRRLKEEYRDLPKEEISNLAKKLGSEEITEAYEKKVLTISGDTVLL 194 Query: 196 --EKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E + + + L + ++ ++H SL + ++ ++ N KN +L H+ Sbjct: 195 KKEDIMDTEILFHECTFLNREDRKFNNHASLDDIVELVKDSNVKNLVLYHIS 246 >gi|194467425|ref|ZP_03073412.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194454461|gb|EDX43358.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 268 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 35/178 (19%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +++D G + M+ + + +DA+ TH H+DH HG+ L ++ +D Sbjct: 27 NHRILIDAGLSGKRIENLMKKIDRSLKDVDAIFVTHEHSDHTHGVG-----VLARRYGMD 81 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA + + + P+ +I N V G ++ Sbjct: 82 VYANEGTWQAMADKVGKI----------PLAQKHIIAPNTVK-----DLGDMDIESFAVS 126 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++ TD ++N D +++ L+ G +S Sbjct: 127 HDAAQPQFYQVHHNNKTFCIITDTGYVSDRVAGTIRNADAYVMECNHDTEMLRMGPYS 184 >gi|67586683|ref|XP_665205.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54655737|gb|EAL34975.1| hypothetical protein Chro.40135 [Cryptosporidium hominis] Length = 367 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 40/157 (25%) Query: 9 ILGCGASLGVPRI------------TGD--WGACDPT---NPKNRRTRSSLKISRV---- 47 LG G G P + D C + KN R S+ I Sbjct: 7 FLGSGTEQGTPNLEHVFKNIDNVNKGNDPFCDICQDSIKIKNKNVRNPFSILIKNPVNNL 66 Query: 48 --SERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLR----- 96 SE + T + + G F + +L + +DA+ +GID R Sbjct: 67 NSSESERHDTFLFEIGSTFRISMLEYAIPANINRVDAIFCMGSDESSFNGIDETREVQKY 126 Query: 97 --------GYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 F + K + +Y + + + Y Sbjct: 127 ERPVGNDGIVFYEPKIRVPIYLTSSAINKFNDWYSYI 163 >gi|331270792|ref|YP_004397229.1| metallo beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329127510|gb|AEB77453.1| metallo beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 419 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 76/209 (36%), Gaps = 33/209 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + N +++D G + ++ ++ V +D V+ THPH DHI G+D + Sbjct: 74 SMLVQQ-----DNHFMLIDAGNNDDSTLVVDYLKKQGVKKLDYVIGTHPHEDHIGGLDKV 128 Query: 96 RGYFLKQKRPID-------VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 F + + Y D + + + TY V I Sbjct: 129 IDSFEIGQVLMPNKTSNTATY--KDVITSIKNKNLKITSPVPGTTYKLGVAEWSIFAPAK 186 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 +S + + L F + + D A +E ++ L D Sbjct: 187 NKDYESVN----------NYSIVQKLKFGNTSFVFTGDAEAVSE--MEMIKGGYDLKADV 234 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S ++ ++ ++PK A++ Sbjct: 235 LKIGHHGSKTSTCQA--FLDKVSPKYAVI 261 >gi|257054875|ref|YP_003132707.1| ribonuclease Z [Saccharomonospora viridis DSM 43017] gi|256584747|gb|ACU95880.1| RNAse Z [Saccharomonospora viridis DSM 43017] Length = 306 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 85/319 (26%), Gaps = 83/319 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + LG G+ VP + +N R + + D Sbjct: 1 MSNR-ELIALGTGS--QVP-----------SRVRNHNG--------YLLRWDSNGFLFDP 38 Query: 61 GPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGL-----RGYFLKQKRP-------- 105 G Q+ + I V TH H DH G+ G+ + Sbjct: 39 GEGTQRQMTFAGTPASAITHVCLTHFHGDHCLGLPGVIQRLSLDGVHRVHAHYPASGQEY 98 Query: 106 ------------------IDVYAAPDC------------MKHLFESFRYCFKALDDRTYP 135 + + A + H E+F Y D RT Sbjct: 99 FERLRHASSFHETTEVVEVPIAADGVVAQGDFGELWARRLDHPVEAFGYQLVEPDRRTML 158 Query: 136 PIVNPIV-IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 P + I DV ++ + + + + G RF A+ D Sbjct: 159 PRLLRHYGISGADVGRLRRAGTLDVNGRTVNVEDVSVLRAGQRF---AFVMDT-RLCDNV 214 Query: 195 LEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL---- 244 + D L+I++ + H + ++ + + +LTH Sbjct: 215 FALAEKADLLVIESTFLTTEAELAEEYGHLTARQAARVAAESAVRTLVLTHFSQRYTDPQ 274 Query: 245 -DYDMVLKSTPSRVVPAFD 262 +D + ++ A D Sbjct: 275 AFHDEAAEIFDGEIIVARD 293 >gi|228470247|ref|ZP_04055151.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] gi|228307990|gb|EEK16865.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] Length = 269 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 79/235 (33%), Gaps = 49/235 (20%) Query: 50 RGSNTTVIVDTGPDFY------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++D G Y Q + A+L TH HADH + L + Sbjct: 19 EHDGQGLLIDAGIALYDIKAGLEQASLSIEHDVQAILLTHNHADHARTVGKLA-----NR 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA L R + DR Y IE +VP + + P Sbjct: 74 YQLPVYATLPVQCGLDH-MRGMERIQHDRRYA-------IEP-EVPFELIG----LVVTP 120 Query: 164 ILQQHGRISSLGFRF---GNVAYC--TDVNAFPAESLEKLQNLDFLIIDA------LKNG 212 H ++G+ ++ TD+ L++++ L+ G Sbjct: 121 FSVPHDSADNVGYHISSEDGFSFTLATDIGHLTPTIERYASMAHHLVLESNYDTEMLRIG 180 Query: 213 LHSS-----------HFSLSESLKKIELI-NP--KNAILTHMHVDLDYDMVLKST 253 + H S +ES++ + I P +N L H+ + ++ +++ T Sbjct: 181 KYPPFLKKRISGPLGHLSNAESVEFLCRIWKPTMRNVFLCHLSKENNHPELVRKT 235 >gi|312792978|ref|YP_004025901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180118|gb|ADQ40288.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 822 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 72/224 (32%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGID 93 S + I N +++D+G Q+LRE + +D L +H H DHI + Sbjct: 15 SCVLIKAC-----NKNILIDSGIRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLP 68 Query: 94 GLR-----GYFLKQK---------------------RPIDVYAAPDCMKHLFES----FR 123 + +F + I +YA + L + F Sbjct: 69 LIAREYPHIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFN 128 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAY 183 Y F+ ++ ++ + + I + G++ Y Sbjct: 129 YTFEPIEGIKVTFFPAGHILGASMIFIQTQE------------------------GSILY 164 Query: 184 CTDVN-----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 D + S+ K++ D +I ++ ++ S E Sbjct: 165 TGDFSADRQLTVDKASVPKIR-PDVVICESTYGDRLHTNRSFEE 207 >gi|297793923|ref|XP_002864846.1| EMB2746 [Arabidopsis lyrata subsp. lyrata] gi|297310681|gb|EFH41105.1| EMB2746 [Arabidopsis lyrata subsp. lyrata] Length = 927 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +R I+AV+ TH H DHI + + Sbjct: 131 DRYILIDAGIMFPDYDEPGVQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGAL----PWV 186 Query: 100 LKQKRP-IDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + P ++A+ M+ + + F +T+ + PI + + Sbjct: 187 IPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSI 246 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + + G I G + A D F E+LE+L Sbjct: 247 PDCSGLFLRCADGNILHTGDWKIDEAPL-DGKVFDREALEEL 287 >gi|242399750|ref|YP_002995175.1| Metal dependent hydrolase [Thermococcus sibiricus MM 739] gi|242266144|gb|ACS90826.1| Metal dependent hydrolase [Thermococcus sibiricus MM 739] Length = 271 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 40/215 (18%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIH-------GIDGLRGYFLKQKR 104 + VD GP ++ R ++ ID + +H H DH + G+ G K+ Sbjct: 32 RRIYVDPGPGALVRAWRYKIDPRKIDVLFVSHRHTDHCNDSEIMVEGM--TVGVTKKRGM 89 Query: 105 PID----VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 I VY D + + Y +L++ I + ++ + Sbjct: 90 LITSKSVVYGDEDHTPAISK---YHLDSLEE-----------IHIPNPGERIQLGDDEMT 135 Query: 161 AIPILQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LH 214 P + H +++GF + G + Y D F + + LI + Sbjct: 136 ITPTI--HSDSTAIGFILKTKLGKIGYIPDTEYFDDL-KKIYEGTRLLIASVTRPTNMKI 192 Query: 215 SSHFSLSESLKKIE--LINPKNAILTHMHVDLDYD 247 H + + ++ P+ I++H+ + + + Sbjct: 193 PYHLCTEDVIYMLKDMKKKPEMLIMSHIGMKMHFA 227 >gi|51971236|dbj|BAD44310.1| putative protein [Arabidopsis thaliana] Length = 911 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +R I+AV+ TH H DHI + + Sbjct: 132 DRYILIDAGIMFPDYDEPGIQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGAL----PWV 187 Query: 100 LKQKRP-IDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + P ++A+ M+ + + F +T+ + PI + + Sbjct: 188 IPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSI 247 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + + G I G + A D F E+LE+L Sbjct: 248 PDCSGLFLRCADGNILHTGDWKIDEAPL-DGKVFDREALEEL 288 >gi|42568733|ref|NP_201147.2| emb2746 (embryo defective 2746); DNA binding / catalytic/ hydrolase [Arabidopsis thaliana] gi|28393617|gb|AAO42228.1| unknown protein [Arabidopsis thaliana] gi|62319893|dbj|BAD93952.1| putative protein [Arabidopsis thaliana] gi|332010363|gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] Length = 911 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +R I+AV+ TH H DHI + + Sbjct: 132 DRYILIDAGIMFPDYDEPGIQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGAL----PWV 187 Query: 100 LKQKRP-IDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + P ++A+ M+ + + F +T+ + PI + + Sbjct: 188 IPALDPNTPIFASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSI 247 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + + G I G + A D F E+LE+L Sbjct: 248 PDCSGLFLRCADGNILHTGDWKIDEAPL-DGKVFDREALEEL 288 >gi|222623010|gb|EEE57142.1| hypothetical protein OsJ_07047 [Oryza sativa Japonica Group] Length = 868 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTG---PDFYM----------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G PDF +++ I+AV+ TH H DHI + + Sbjct: 103 DRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWSHKIEAVIITHGHEDHIGAL----PWV 158 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + L R + + G Sbjct: 159 IPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRL------------KVFRVRKRFQAGP 206 Query: 159 IEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 207 FEVEPLRVTHSIPDCCG 223 >gi|218190927|gb|EEC73354.1| hypothetical protein OsI_07566 [Oryza sativa Indica Group] Length = 871 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTG---PDFYM----------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G PDF +++ I+AV+ TH H DHI + + Sbjct: 103 DRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWSHKIEAVIITHGHEDHIGAL----PWV 158 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + L R + + G Sbjct: 159 IPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRL------------KVFRVRKRFQAGP 206 Query: 159 IEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 207 FEVEPLRVTHSIPDCCG 223 >gi|319949590|ref|ZP_08023634.1| hypothetical protein ES5_09043 [Dietzia cinnamea P4] gi|319436741|gb|EFV91817.1| hypothetical protein ES5_09043 [Dietzia cinnamea P4] Length = 744 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 53/209 (25%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +E G + ++ D G + +++ ++A++ TH H DHI I + Sbjct: 225 CGVLFPSSTEPGVDL-ILPDFGH------IEDRLDQVEALVLTHAHEDHIGAI----PFL 273 Query: 100 LKQKRPIDVYAAPDCMKHL-----FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 LK + I V + + + + F+ +D+ + S Sbjct: 274 LKLRPDIPVVGSKFTLALVAAKCQEHRIKPVFRTVDESSV-------------------S 314 Query: 155 AGGVIEAIPILQQHGRISSLGFRF---GNVAYCT-DVN--AFP----AESLEKL-----Q 199 G + H LG N + D+ P L K+ + Sbjct: 315 DLGKFQVRYFDVNHSIPECLGVVIKAGDNTVMMSGDIKLDQLPTDKRPTDLPKMSRFGDE 374 Query: 200 NLDFLIID---ALKNGLHSSHFSLSESLK 225 +D L++D A G+ S + +L+ Sbjct: 375 GVDLLLLDSTNATTPGISPSESGVRPALQ 403 >gi|314933717|ref|ZP_07841082.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] gi|313653867|gb|EFS17624.1| metallo-beta-lactamase family protein [Staphylococcus caprae C87] Length = 207 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D D ++ L + A+L TH H DHI +D + K + Sbjct: 19 ENEESVILIDPSSESDKIIKKLNQINKPFKAILLTHAHYDHIGALDDIIS-----KYDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY + L + + P VI + P ++ IE + Sbjct: 74 VYMHQEEFDFLQD-----PVKNGASKFKQYGMPQVI-SYAKPSKLEEGSKEIEGLKFDVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|255957035|ref|XP_002569270.1| Pc21g23030 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590981|emb|CAP97200.1| Pc21g23030 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1042 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 89/305 (29%), Gaps = 97/305 (31%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S VP R S+ + ++D G + Sbjct: 587 EIIALGTGSS--VPS--------------KYRNVSATLLKVPG----YGYYLLDCGENTL 626 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLK------------ 101 Q+ LRE + ++ + +H HADH G I K Sbjct: 627 GQLKRVFEPEELREVLQNLRMIWISHLHADHHLGTVSVIKAWHAENFKDGFGSTASRETD 686 Query: 102 -----QKRPIDVYAAPDCMKHLF-----ESFRY-------CFKALDDRTYPPIVNPIVIE 144 Q++ + V + + L E F Y ++ + + + Sbjct: 687 MARILQEKRLAVVSDNAMISWLEEYSQVEDFGYDKLLTLSAHPDVEGSKVTTVFSHPLPN 746 Query: 145 NNDVPICMKSAGGVIE-----------AIPILQQHGR-------ISSLGFRFGNVAYCTD 186 + + + +H + + S GF+ V+Y D Sbjct: 747 RRRSQLDFTDKSSPLTPLLKSATGLADILTCRVKHCKGALAVSLVFSNGFK---VSYSGD 803 Query: 187 VNAFPAESLEKL-QNLDFLI---------IDALKNGLHSSHFSLSESLKKIELINPKNAI 236 P++ + Q LI + + + HS+ SE+++ + + + Sbjct: 804 CR--PSDKFAAIGQGSTVLIHEATFQPDMVGSARAKRHST---SSEAMEVGRRMQARAVL 858 Query: 237 LTHMH 241 LTH Sbjct: 859 LTHFS 863 >gi|325292649|ref|YP_004278513.1| metal dependent hydrolase [Agrobacterium sp. H13-3] gi|325060502|gb|ADY64193.1| metal dependent hydrolase [Agrobacterium sp. H13-3] Length = 555 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 71/217 (32%), Gaps = 38/217 (17%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++VD G F + + EQ ++ ++ TH H DH ++ Sbjct: 28 GPESKRQWIMVDCGVTFAGLDLPGVDLVLPDISYIAEQKKNLKGIIITHAHEDHYGALND 87 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRY------CFKALDDRTYPPIVNPIVIENNDV 148 L + VYA+ L Y V P IE V Sbjct: 88 LWP-----GLNVPVYASGFTAGMLEAKRAYEGSRAEIPITPFKAGDRINVGPFEIEAVGV 142 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQNLDFL 204 + ++ P+ G + G ++ ++ TD F A E + L Sbjct: 143 NHSIPEPMSLVIRTPL----GNVIHTGDWKIDEAPSLGPLTDEARFRAIGEE---GVLAL 195 Query: 205 IID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + D +L++G+ S +SE L++I +T Sbjct: 196 MCDSTNSLRDGVSPSEHEVSEGLRQIIENAEGRVAIT 232 >gi|229109168|ref|ZP_04238767.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|229144325|ref|ZP_04272731.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228639112|gb|EEK95536.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228674178|gb|EEL29423.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] Length = 564 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|224542911|ref|ZP_03683450.1| hypothetical protein CATMIT_02105 [Catenibacterium mitsuokai DSM 15897] gi|224524162|gb|EEF93267.1| hypothetical protein CATMIT_02105 [Catenibacterium mitsuokai DSM 15897] Length = 265 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 83/280 (29%), Gaps = 70/280 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T+LG G +L V +I ++ +VD G Sbjct: 1 MKLTMLGTGNAL-VTKIYNTC---------------------FVLEDNHQYFMVDAGGGN 38 Query: 64 -FYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPID------------- 107 Q+ + D + TH H DH+ G+ + R I Sbjct: 39 QILTQLKKAGYDWKDMKHIFLTHKHIDHLLGM-------VWMMRMITQFMNAGKYEGDAY 91 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y + + L + ++ + +++ + + G + Sbjct: 92 IYGHDEVIHILKDMADTLLVPKQSALIGKRLHLVEVKDQE---TKEIMGHPVTF--FDIH 146 Query: 168 HGRISSLGFRFGNVAY----CTDVNAFP--AESLEKLQNLDFLIIDAL-----KNGLHS- 215 + GF Y T P E +N D L+ +A ++ H Sbjct: 147 STKAKQFGFVVE---YDGKKLTCCGDEPYCEEEKVYAENADVLLHEAFCLYEERDFRHPY 203 Query: 216 --SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 H ++ ++ + + ++ KN +L H + D+ K Sbjct: 204 EKHHSTVKDACELAQKLHIKNLVLYH--TEDDHVDNRKEL 241 >gi|222618046|gb|EEE54178.1| hypothetical protein OsJ_00998 [Oryza sativa Japonica Group] Length = 964 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ T LG G+S P R SS+ I+ ++ G +++D G Sbjct: 612 REDMEITFLGTGSSQ----------------PSKYRNVSSIYINLFTQGG----ILLDCG 651 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 Q+ R + V S+ + +H HADH G+ + Sbjct: 652 EGTLGQLKRRFGVSGADDAVKSLKCIWISHIHADHHTGVARVLAL 696 >gi|195503420|ref|XP_002098644.1| GE26465, isoform B [Drosophila yakuba] gi|194184745|gb|EDW98356.1| GE26465, isoform B [Drosophila yakuba] Length = 548 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|30019760|ref|NP_831391.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29895305|gb|AAP08592.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 557 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 85 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 127 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 128 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 165 >gi|253578554|ref|ZP_04855826.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850872|gb|EES78830.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 266 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 69/260 (26%), Gaps = 55/260 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP-- 62 TILG G + V + + ++D G Sbjct: 1 MKLTILGTGNAK-VTKCYNTC---------------------FALNEDKEYFMIDGGGGN 38 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGID-GLRGYFLKQ-----KRPIDVYAAPDC 114 Q+ + I + TH H DH+ GI LR Y + +Y + Sbjct: 39 TILKQLEDAGISWKEIRTIFVTHKHIDHLLGIIWMLRMYCQGMARGQFGGEVTIYGHDEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + + + V+ +++ + + Sbjct: 99 ISLLKQMAEMLLTPKETKFIGDKVHLEEVKDGE-----DRTILGHRVTFFDILSTKAKQF 153 Query: 175 GFRFGNVAY-----CTDVNAFPAESLE---------KLQNLDFLIIDALKNGLHSSHFS- 219 GF Y T P E L L A K + H S Sbjct: 154 GFCME---YAEGKKLTCCGDEPYNECEQKYAKNSTWLLHEAFCLFSQADKFKPYEKHHST 210 Query: 220 LSESLKKIELINPKNAILTH 239 + ++ + + + +N IL H Sbjct: 211 VKDACELAQKLEAENLILYH 230 >gi|229043465|ref|ZP_04191175.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|228725843|gb|EEL77090.1| Zn-dependent hydrolase [Bacillus cereus AH676] Length = 564 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|148508276|gb|ABQ76060.1| Ribonuclease Z [uncultured haloarchaeon] Length = 142 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 31/159 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G ++ P R S+ + R ER ++ D G Sbjct: 1 MRATFLGTGGAV----------------PTTERGPSAFFVERDGER-----LLFDCGEGT 39 Query: 65 YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFES 121 Q++R S+ + TH H DHI GI GL F + + ++ P HL Sbjct: 40 QRQMMRFGTGFSLSHIFVTHLHGDHILGIPGLIQTLDFNDRTDALAIHGPPGSKPHLRH- 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 ++ Y P + E + + + +I Sbjct: 99 ------LVETAGYRPGYPINIREIRPGTVAVDTEEYIIR 131 >gi|301311041|ref|ZP_07216970.1| ribonuclease Z [Bacteroides sp. 20_3] gi|300831104|gb|EFK61745.1| ribonuclease Z [Bacteroides sp. 20_3] Length = 304 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 99/317 (31%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPH 85 C P R +S + + ++D G +Q+ +R + ++ + +H H Sbjct: 11 CGSALPTTRHLATSQIVDL-----RDKLYMIDCGEGTQVQMRRMRIKFSRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRG----------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DH G+ GL + + I+ Y P + + Y Sbjct: 66 GDHCFGLPGLISTLGMLGRNGELVIHGPKDIESYMRP-VLDIFCKGLPY----------- 113 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----------------- 178 + +I+ + M+ + +IP+ RI G+ F Sbjct: 114 -EIRFNLIDPTTHSLVMEDRSLSVYSIPLKH---RIPCCGYLFAEKAKEAHIIREMTDFY 169 Query: 179 ------------------------------------GNVAYCTDVNAFPAESLEKLQNLD 202 AYC+D AF + ++ +D Sbjct: 170 QVPIRMIQEIKRGADFVTPEGEVIPNARLTRPAVAPKRYAYCSDT-AFHPSIIPIIEGVD 228 Query: 203 FLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L DA + + H + ++ + K ++ H + LK Sbjct: 229 LLYHEATFAECDAARAKE-TFHSTARQAAEIAYKAQVKRLVIGHYSARYEDMAPLKKEAD 287 Query: 256 RVVPAF----DGMQFSS 268 ++ P +GM+ S Sbjct: 288 KIFPGTILGEEGMRLSV 304 >gi|229127039|ref|ZP_04256038.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|228656392|gb|EEL12231.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] Length = 564 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|194745794|ref|XP_001955372.1| GF16269 [Drosophila ananassae] gi|190628409|gb|EDV43933.1| GF16269 [Drosophila ananassae] Length = 756 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 32/183 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++D G P+F ++ R QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDPNFIKELKR-QVHTLDAVLLSHPDAYHLGALPYLVG---KLGLN 81 Query: 106 IDVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F D + I + + +K Sbjct: 82 CPIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLI 205 G I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 141 GYGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLI 199 Query: 206 IDA 208 DA Sbjct: 200 TDA 202 >gi|23397297|gb|AAN31930.1| unknown protein [Arabidopsis thaliana] Length = 872 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 97/342 (28%), Gaps = 101/342 (29%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D ILG G+S P R S++ I S ++++D G Sbjct: 517 RDDMEIVILGTGSSQ----------------PSKYRNVSAIFIDLFS----RGSLLLDCG 556 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----QKRPIDV 108 Q+ R E V + + +H HADH G+ + K P+ V Sbjct: 557 EGTLGQLKRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILALRSKLLKGVTHEPVIV 616 Query: 109 YAAPDCMKHLFESFRYCFKALDD--------RTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + F ++ L+D R+ + + + + G ++ Sbjct: 617 VGP-----RPLKRFLDAYQRLEDLDMEFLDCRSTTATSWASLESGGEAEGSLFTQGSPMQ 671 Query: 161 --------------------------------------AIPILQQHGRISSLGFRFGNV- 181 + Q +G + R +V Sbjct: 672 SVFKRSDISMDNSSVLLCLKNLKKVLSEIGLNDLISFPVVHCPQAYGVVIKAAERVNSVG 731 Query: 182 --------AYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKI 227 Y D P ++E ++ LI DAL +H + E++ Sbjct: 732 EQILGWKMVYSGDSRPCPE-TVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVG 790 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 N +LTH V+ + AFD M + Sbjct: 791 SAANVYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDLMSINM 832 >gi|83593146|ref|YP_426898.1| beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] gi|83576060|gb|ABC22611.1| Beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] Length = 282 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 20/213 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 TVI+D G + + A+L++H H DHI G + +D++ Sbjct: 36 GGQTVILDAGTGIRALGASAALRGVSRLALLFSHVHRDHIEGFPFFAP-AHDRAVRLDIF 94 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A P + + + + ++ + I+ H Sbjct: 95 AGPIEGASIRQLLDNLMSRPMFPLSLDQLRAQKVFHDLPAATAFTLFERIKVRTAALNHP 154 Query: 170 RISSLGFRFGN----VAYCTDVNAFPAES----LEKLQNLDFLIIDALKNGL----HS-- 215 + +RF + V Y TD P + LE + D+++ D+ H Sbjct: 155 G-GATAYRFEHGGRVVCYVTDTEHRPGQPDAGLLELIAGADYVLYDSTYTDREFAAHRGW 213 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 H + E ++ ++ ++ H D D+D Sbjct: 214 GHSTWEEGVRLCRQAGARHLVI--FHHDPDHDD 244 >gi|15618788|ref|NP_225074.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|15836412|ref|NP_300936.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|16752160|ref|NP_445527.1| hypothetical protein CP0990 [Chlamydophila pneumoniae AR39] gi|33242239|ref|NP_877180.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|4377197|gb|AAD19017.1| metal dependent hydrolase [Chlamydophila pneumoniae CWL029] gi|7189904|gb|AAF38769.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8979253|dbj|BAA99087.1| metal dependent hydrolase [Chlamydophila pneumoniae J138] gi|33236750|gb|AAP98837.1| putative metal dependent hydrolase [Chlamydophila pneumoniae TW-183] gi|269302665|gb|ACZ32765.1| metallo-beta-lactamase family protein [Chlamydophila pneumoniae LPCoLN] Length = 265 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 68/215 (31%), Gaps = 51/215 (23%) Query: 56 VIVDTGPDFY---MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G ++L + I A+ TH H+DHI GI + + Sbjct: 25 ILIDLGVSKQVVTRELLSMNIDPEDIQAIFVTHEHSDHISGIKSFVKAYNT-----PIVC 79 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L +++ E +E H Sbjct: 80 NLETARALCH----------------LLDSHP-EFKIFSTGSSFCFQDLEVQTFNVPHDA 122 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID----------ALKNGLHSS 216 + + F F + +CTD+ + +L + D+L+I+ + + ++ Sbjct: 123 VDPVAFIFHYREEKLGFCTDLGWVTSWITHELYDCDYLLIESNHSPELVRQSQRPDVYKK 182 Query: 217 -------HFSLSESLKKIELI---NPKNAILTHMH 241 H S E + ++ I K L H+ Sbjct: 183 RVLSKLGHISNQECGQLLQKIITPKLKKLYLAHLS 217 >gi|227529841|ref|ZP_03959890.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540] gi|227350325|gb|EEJ40616.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus vaginalis ATCC 49540] Length = 268 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G ++ L ++ +DA+ TH H DH HG+ L ++ + Sbjct: 26 DEHRILIDAGLSGKRIENLMAKIDRSLTDVDAIFVTHEHTDHCHGVG-----VLARRYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + P+ +I N V G I+ Sbjct: 81 DIYANQGTWDAMASKIGKI----------PLEQKHIIAPNSVK-----DLGDIDVESFAV 125 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H ++ TD ++N D +++ Sbjct: 126 SHDAAEPQFYQVHHNNKTFCIITDTGYVSDRVEGTIRNADAYLMEC 171 >gi|218232605|ref|YP_002366395.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus B4264] gi|296502294|ref|YP_003663994.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|218160562|gb|ACK60554.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus B4264] gi|296323346|gb|ADH06274.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 557 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 85 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 127 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 128 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 165 >gi|55378101|ref|YP_135951.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] gi|55230826|gb|AAV46245.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] Length = 640 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 57/231 (24%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D+ T LGC C R++ +S R +++D G Sbjct: 180 DWVRLTTLGC---------------CREVG------RAAFILSTPESR-----ILIDCGD 213 Query: 63 DF-------YMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 Y+Q L S+DAV+ TH H DH L K +Y Sbjct: 214 KPGAEGEVPYLQAPEALAAGPNSLDAVVLTHAHLDHSA----LIPILFKYGYDGPIYTTA 269 Query: 113 DCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHG 169 + Y A + PP + V + I ++ G V + P ++ H Sbjct: 270 PTRDLMGLLQLDYLDVASKEGRTPPYESQQVRDALKHTIPLEF-GNVTDIAPDIKLTMHN 328 Query: 170 RISSLG-----FRFG----NVAYCTDVN----AFPAESLEKLQNLDFLIID 207 LG F G NVA+ D++ ++ ++ L+++ Sbjct: 329 AGHILGSAVCHFHIGEGRYNVAFSGDIHYKDTRLLDGAVNDFPRVETLVLE 379 >gi|229189794|ref|ZP_04316807.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228593708|gb|EEK51514.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] Length = 550 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLIVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 78 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 120 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 121 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 158 >gi|161830990|ref|YP_001596521.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 331] gi|161762857|gb|ABX78499.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 331] Length = 254 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 41/272 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ + N +S++ + ++ +++D G D Sbjct: 1 MKLIFLGSGSAF--------------ADISNN-FQSNILLE----NSNHKHLLIDCGTDA 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKRPIDVYAAPDCMKHLF- 119 + + + ID+V +H H DH+ G++ YF + ++ P + L+ Sbjct: 42 HHSLKNVNLRYADIDSVYVSHFHFDHVGGLEWLAFSAYFDPAVKKPKLFIHPSMLNILWD 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GR--ISSLGF 176 ++L + + + E + + H G+ + S G Sbjct: 102 HVLSGGLQSLKGESPATLETYFTLVPIREEKYFTWESINFEMVKTIHVHNGKLLLPSYGL 161 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELIN 231 F + TD FP + + D + D + H + + I Sbjct: 162 FFSLEKTKIFITTDTQFFPHRYADYYREADLIFHDCEIDKTKTGVHAHFQQLMNLNPAIK 221 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 K L Y P F G Sbjct: 222 SK-MWL--------YHYSENDLPDAKAAGFQG 244 >gi|78777128|ref|YP_393443.1| metal dependent phosphohydrolase [Sulfurimonas denitrificans DSM 1251] gi|78497668|gb|ABB44208.1| metal dependent phosphohydrolase [Sulfurimonas denitrificans DSM 1251] Length = 796 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 83/225 (36%), Gaps = 42/225 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +S+ ++ ++D G MQ L +I+ + ++H H DHI L Sbjct: 20 TSIMVT--------KNTVIDAG--NIMQALDRDAKNINKIFFSHSHLDHIVDSAFLIDNS 69 Query: 100 LKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VNPIVIENNDVPIC 151 + P+ +Y P +K L + + F + + I + + +E Sbjct: 70 FATREEPLYLYGLPQTIKALKK---HLFNSEIWPDFSEINLINTKTPSVVYVELELYKKY 126 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL---QNLDFL 204 G + P+ H + G+ G++ + D P + + + +++ L Sbjct: 127 ELEEG--VSLTPLEANH-TVECCGYLIEGKKGSILFSGDTFKNP-KLWDIINSNESIKAL 182 Query: 205 IIDAL------KNGLHSSHFS---LSESLKKIELINPKNAILTHM 240 IID K HS H + L E L+ ++ + K + H+ Sbjct: 183 IIDVSFPNKLTKIAQHSKHLTPHFLREELELLKRKDVK-IYINHL 226 >gi|42780804|ref|NP_978051.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|42736724|gb|AAS40659.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 557 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA--- 155 FLKQ + +YA + + + +++N I + S Sbjct: 85 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQDNTELIVIHSESEI 127 Query: 156 -GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+ H LG F G + + D Sbjct: 128 DFGAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 165 >gi|16264506|ref|NP_437298.1| hypothetical protein SM_b21254 [Sinorhizobium meliloti 1021] gi|307307646|ref|ZP_07587378.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] gi|15140643|emb|CAC49158.1| conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306901772|gb|EFN32373.1| beta-lactamase domain protein [Sinorhizobium meliloti BL225C] Length = 276 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 21/174 (12%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----Q 102 R +I D G ++ E V D V +TH H DHI G+ + + + Sbjct: 37 RCGKEVLIFDAGSGLREAGLSLMSEGVSEFD-VFFTHTHYDHIIGLPYFKPIYRCSSAVR 95 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ + + E + I + + P S + Sbjct: 96 FWSGHLHGTMSTAEMINEFM----RPPWFPVGTGICQASLDTVDFRPGETLSPRKDVSIR 151 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 + H +G+R VA D P L+ + D +I D Sbjct: 152 TMSLVHPG-GCVGYRIEWGGRAVALVYDTEHEPGILDPVLLDFIAGADLMIYDC 204 >gi|115435488|ref|NP_001042502.1| Os01g0232300 [Oryza sativa Japonica Group] gi|113532033|dbj|BAF04416.1| Os01g0232300 [Oryza sativa Japonica Group] Length = 537 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ T LG G+S P R SS+ I+ ++ G +++D G Sbjct: 185 REDMEITFLGTGSSQ----------------PSKYRNVSSIYINLFTQGG----ILLDCG 224 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 Q+ R + V S+ + +H HADH G+ + Sbjct: 225 EGTLGQLKRRFGVSGADDAVKSLKCIWISHIHADHHTGVARVLAL 269 >gi|229178122|ref|ZP_04305493.1| Zn-dependent hydrolase [Bacillus cereus 172560W] gi|228605252|gb|EEK62702.1| Zn-dependent hydrolase [Bacillus cereus 172560W] Length = 550 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++NN I + S Sbjct: 78 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNNTELIVIHSESEI 120 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 121 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 158 >gi|169334734|ref|ZP_02861927.1| hypothetical protein ANASTE_01140 [Anaerofustis stercorihominis DSM 17244] gi|169257472|gb|EDS71438.1| hypothetical protein ANASTE_01140 [Anaerofustis stercorihominis DSM 17244] Length = 298 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + +++DTG + +L + + ID V+ THPH+DHI G+ G+ F Sbjct: 60 SYLISNSGFGNILIDTGDTEHKDILVSHLKKRGIKKIDYVILTHPHSDHIGGMTGVLDNF 119 Query: 100 LKQKRPIDVYAAPDCMK 116 + ++Y Sbjct: 120 QVE----NIYMPKMTHN 132 >gi|281425840|ref|ZP_06256753.1| ribonuclease Z [Prevotella oris F0302] gi|281400101|gb|EFB30932.1| ribonuclease Z [Prevotella oris F0302] Length = 304 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 12/127 (9%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA 111 +VD G MQ+ R ++ + AV +H H DH G+ G+ F R P VYA Sbjct: 34 FMVDCGEGTQMQLRRNKIRFTKLQAVFISHLHGDHCFGLIGMISTFGMLGRTAPFHVYAP 93 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L + K L V I+ + + +E IP+ R Sbjct: 94 EALGPILQIQLDFFCKGLGFE-----VKFHPIDTTRKIVIYEDRSLTVETIPLEH---RT 145 Query: 172 SSLGFRF 178 + GF F Sbjct: 146 PTCGFLF 152 >gi|229029387|ref|ZP_04185472.1| Zn-dependent hydrolase [Bacillus cereus AH1271] gi|228731947|gb|EEL82844.1| Zn-dependent hydrolase [Bacillus cereus AH1271] Length = 564 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + N V++D G F + L+E I ++ TH H DHI GI Sbjct: 34 QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI---- 89 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 YFLKQ + +YA + + L + IVI + + Sbjct: 90 PYFLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQDDTELIVIHSES-----EIDF 136 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+ H LG F G + + D Sbjct: 137 GAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 172 >gi|332141951|ref|YP_004427689.1| beta-lactamase-like protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551973|gb|AEA98691.1| beta-lactamase-like protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 280 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 78/238 (32%), Gaps = 39/238 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID---AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T +++D+G +L E + + +L +H H DHI G + +R I++ Sbjct: 35 DGTDIVLDSGTGIR--LLGEHLAKKNTPIHLLLSHNHWDHIQGFPFFPPI-YQAEREINI 91 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 Y LFE K ++ +P + + A G + + Sbjct: 92 Y-PGQT---LFEEPDQILKQMEGSLFPVPRSALRANISLIEIPKADNTFAIGSAKITRLA 147 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLE--------KLQNLDFLIIDA---LK 210 H S + V Y TD +P E +N D LI DA L Sbjct: 148 MNHPGSGS-AYCINADGVKVTYITDNELYPPYKKETDFIDFAKFAENADLLIHDAQYMLS 206 Query: 211 NGLHSS---HFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLKSTPSRVVPA 260 + + H E++K N K L D D D V+K V A Sbjct: 207 DMPAKNGWGHSVAEEAVKLAMASNAKKLAL--YSHDPERTDDDIDDVVKHCNEYVTVA 262 >gi|226315494|ref|YP_002775390.1| hypothetical protein BBR47_59090 [Brevibacillus brevis NBRC 100599] gi|226098444|dbj|BAH46886.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 262 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 49/221 (22%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +V++D G + ++ + + A+L TH H DHI G+ + ++ + Sbjct: 20 DRVSVLIDVGITGKQAEAALETIGVNPAELSAILVTHEHVDHIKGVG-----VMARRYGL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA L D R + + +E+ + ++S G Sbjct: 75 PIYANEKTWSELDGQIGTI--KEDQRRFFSVGEKKELED----LGIESFG---------I 119 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS- 215 H +GF F ++ TD+ E ++ D + ++ L+ + Sbjct: 120 SHDAAEPMGFCFYDGKKKLSVATDLGYVSDRIKETIRGADAYVFESNHDVELLRMSQYPW 179 Query: 216 ----------SHFSLSESLK-KIELI--NPKNAILTHMHVD 243 H S + ++ + + L H+ + Sbjct: 180 SIKRRILSDVGHLSNEAAGDALLDCLTGGAERVYLAHLSKE 220 >gi|218187816|gb|EEC70243.1| hypothetical protein OsI_01027 [Oryza sativa Indica Group] Length = 945 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 28/105 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ T LG G+S P R SS+ I+ ++ G +++D G Sbjct: 593 REDMEITFLGTGSSQ----------------PSKYRNVSSIYINLFTQGG----ILLDCG 632 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 Q+ R + V S+ + +H HADH G+ + Sbjct: 633 EGTLGQLKRRFGVSGADDAVKSLKCIWISHIHADHHTGVARVLAL 677 >gi|196045163|ref|ZP_03112396.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB108] gi|225863568|ref|YP_002748946.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB102] gi|196024165|gb|EDX62839.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB108] gi|225787795|gb|ACO28012.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus 03BB102] Length = 557 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGNVVHTGDFK 165 >gi|83646045|ref|YP_434480.1| beta-lactamase superfamily hydrolase [Hahella chejuensis KCTC 2396] gi|83634088|gb|ABC30055.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Hahella chejuensis KCTC 2396] Length = 270 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 37/246 (15%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDG 94 R +++ + R +++D GP + R Q+ +IDA+ TH H DH G+ Sbjct: 16 RVNAAVLVQEQDFR-----LLIDCGPTVPQALWRRQLAADAIDAIYLTHIHPDHASGLTA 70 Query: 95 L--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + ++R + + P HL Y + Sbjct: 71 LLNQWASTGRRRSLQILCQPGQQPHLEWM----------SAYAAWPEQLPFAIQWRDAAR 120 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLD 202 + G QH +S+L R G++ Y D A S + Sbjct: 121 TTEIGPWRLQTAPTQHS-VSNLALRLEQQGPARHARGSLFYSGDGRP-TAASASLMTGCV 178 Query: 203 FLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR--V 257 + + L+ G S H L L++++ P++ +L H+ D ++ V ++ R V Sbjct: 179 MAMQECFSPLEQGEGSHHGDLPGCLRQLQTARPRHLLLYHI-EDGQHNAVAEAIRPRVDV 237 Query: 258 VPAFDG 263 A DG Sbjct: 238 SVAEDG 243 >gi|70954236|ref|XP_746174.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526705|emb|CAH79695.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 570 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 2 KDYYHFTILGCGA-----SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV 56 K + LG G+ S G +S I + +++ N Sbjct: 72 KSDWKIIFLGTGSMYPSVSRG----------------------TSSFIFQTTKKKYNEAY 109 Query: 57 IVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 + D G ++ + + I + TH H DH G+ + L+ I++Y Sbjct: 110 LFDCGESTFISLQEANIKVSKIKNIFITHLHGDHCLGLISVLT-MLRGLNTINIYGPEGL 168 Query: 115 MKHLFESF 122 + L +F Sbjct: 169 YRFLKNNF 176 >gi|325971176|ref|YP_004247367.1| ribonuclease Z [Spirochaeta sp. Buddy] gi|324026414|gb|ADY13173.1| Ribonuclease Z [Spirochaeta sp. Buddy] Length = 307 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 75/258 (29%), Gaps = 61/258 (23%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGID 93 R +S + R E + D G +++L + I ++ +H HADH+ G+ Sbjct: 18 NRYLTSAMVRRDGEL-----FLFDCGEGTQVSLKMLNLKWKKIHSIFISHMHADHVTGLP 72 Query: 94 GLRGY--FLKQKRPIDVYAAP--------------------------------DCMKHLF 119 G+ + + P+ +Y + Sbjct: 73 GILMLSSQVDRNEPLTIYGPARLKEYIDANRRILDMYINYEIVVKVAESGVILETDDFTI 132 Query: 120 ESFRYCFKAL------DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 +F ++ P +P + VP+ G + + + I G I Sbjct: 133 SAFPLHHTKPCVGYVMQEKDRPGEFHPEQAQQLGVPMG-PMWGKLQKGLSITLGDGTIIE 191 Query: 174 LGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLII------DALKNGLHSSHFSLS 221 G +Y TD P E ++ D L+ D + H + Sbjct: 192 SHQVIGPKREGRKFSYVTDSVYLP-SIAEHVKKSDLLLCEGMFTADMAETAYEKKHMTAD 250 Query: 222 ESLKKIELINPKNAILTH 239 ++ + + L H Sbjct: 251 QAARIAKEAEVAQLGLLH 268 >gi|320537368|ref|ZP_08037323.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] gi|320145833|gb|EFW37494.1| metallo-beta-lactamase domain protein [Treponema phagedenis F0421] Length = 322 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 46/233 (19%) Query: 49 ERGSNTTVIVDTGPDFYMQVLR-------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 E T+I D G + + + +TH H DHI G+ +F+ Sbjct: 68 ETNDGETLIFDAGTGIRELGIDLTRRPDYRKKKHTYHLFFTHFHWDHIQGL----PFFIP 123 Query: 102 QKRP---IDVYAA-PDCMKHLFESFRYCFKA---LDDRTYPPIVNPIVIENNDVPICMKS 154 P I VY+ + L E +Y + L + + I+ ++ I + Sbjct: 124 AFDPRNTIIVYSTRKKAKEFLEEQMKYPYFPISMLGEDGFAAKFEFRYIKPDEPIISI-- 181 Query: 155 AGGVIEAIPILQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQN-------LD 202 G ++ +H + V + TD + EK + D Sbjct: 182 --GDVDIGWHRVRHPG-GCNAYSITEKNGKKVIFSTDT-ELREQDFEKNEGNKLFYNNTD 237 Query: 203 FLIIDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 +IID + + S H + S + K L H + YD Sbjct: 238 LMIID-SQYTVPDSIEKQGWGHSTFSIVIDFAASWGIKQVAL--FHHEPTYDD 287 >gi|320530208|ref|ZP_08031278.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] gi|320137641|gb|EFW29553.1| metallo-beta-lactamase domain protein [Selenomonas artemidis F0399] Length = 339 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQV---LSIDAVLYTHPHADHIHGID 93 + + +E T VD Q+ + + ID ++ THPHADHI G+D Sbjct: 61 ILVQTGTENILIDTADVDERDQLRTQLAKAGIEKGGRIDKIILTHPHADHIGGMD 115 >gi|15672524|ref|NP_266698.1| hypothetical protein L128550 [Lactococcus lactis subsp. lactis Il1403] gi|12723427|gb|AAK04640.1|AE006288_3 hypothetical protein L128550 [Lactococcus lactis subsp. lactis Il1403] gi|326406043|gb|ADZ63114.1| metallo-beta-lactamase family protein [Lactococcus lactis subsp. lactis CV56] Length = 210 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +I+D G D + R ++ +I A+L TH H DHI G++ LR K + +Y Sbjct: 23 SHLIIDPGSDSSALLERLKITDKTISAILLTHAHFDHIIGLNELR----KHFPDVPIYL 77 >gi|302671025|ref|YP_003830985.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302395498|gb|ADL34403.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 456 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 35/141 (24%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 V+ +H H DH+ G+ L + + VY + + E ++ Sbjct: 89 VIISHMHIDHMGGLGAL-------DQRMPVYMSRESATLYHE--------------LGVM 127 Query: 139 NPIVIENNDVPICMKSAG----GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN-- 188 N + I ++ I + G G I + H I + GF GN+ Y D Sbjct: 128 NELEIREHENIIPVDYDGSFTVGDITVTCVQVDHDVIGACGFMIATPDGNICYTGDYRYH 187 Query: 189 ----AFPAESLEKLQNLDFLI 205 A +K + D +I Sbjct: 188 GYHPEISAAFAQKCKGADVMI 208 >gi|227543743|ref|ZP_03973792.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri CF48-3A] gi|300908808|ref|ZP_07126271.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri SD2112] gi|227186311|gb|EEI66382.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri CF48-3A] gi|300894215|gb|EFK87573.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri SD2112] Length = 268 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 56/181 (30%), Gaps = 41/181 (22%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +++D G + M+ + + +DA+ TH H+DH HG+ L ++ +D Sbjct: 27 NHRILIDAGLSGKRIENLMKKIDRSLKDVDAIFVTHEHSDHTHGVG-----VLARRYGMD 81 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-------E 160 VYA + + P+ +I N V + Sbjct: 82 VYANEGTWQAMANKVGKI----------PLAQKHIIAPNTVKDLGDMDIESFAVSHDAAQ 131 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H TD ++N D +++ L+ G + Sbjct: 132 PQFYQVHHNN--------KTFCIITDTGYVSDRVEGTIRNADAYVMECNHDTEMLRMGPY 183 Query: 215 S 215 S Sbjct: 184 S 184 >gi|171910558|ref|ZP_02926028.1| putative phytochrome sensor protein [Verrucomicrobium spinosum DSM 4136] Length = 472 Score = 52.8 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 93/286 (32%), Gaps = 65/286 (22%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 HFT+ G S P + R R S +S N +I D G Sbjct: 181 TRRTHFTLWGTRGST--PTVGH------------RFQRYGGNTSCMSFSVGNDLLIFDAG 226 Query: 62 PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +L + + TH H DHI G +L I VY + K+L Sbjct: 227 SGIRELGNHILEGGPRKLH-LFITHTHWDHIQGFPFFTPAYLP-GFDITVYGSTGFGKNL 284 Query: 119 FESFRYCFKALDDRTYPPIV------NPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 F+ DR Y P+ N +D P+ + + E H + Sbjct: 285 EA----LFRGQLDRDYFPVQMEDMRSNLRFQHISDKPVEIGNVRVTWEF-----SHHPLP 335 Query: 173 SLGFRFG----NVAYCTD----------VNAFP---------AESLEKLQNLDFLIIDA- 208 ++G++ +V + D +A + + L +D ++ +A Sbjct: 336 TVGYKVETGEQSVVWMPDDEFLQGYTGAPHALSRYHPQVAPFEKIVSFLNGVDVVLHEAQ 395 Query: 209 LKNGLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + S H SL + ++L + I+TH D +D V Sbjct: 396 YMADEYPSRIGWGHCSLPNACALMKLARVQRWIVTH--HDPMHDDV 439 >gi|299140700|ref|ZP_07033838.1| ribonuclease Z [Prevotella oris C735] gi|298577666|gb|EFI49534.1| ribonuclease Z [Prevotella oris C735] Length = 304 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 12/127 (9%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA 111 +VD G MQ+ R ++ + AV +H H DH G+ G+ F R P VYA Sbjct: 34 FMVDCGEGTQMQLRRNKIRFTKLQAVFISHLHGDHCFGLIGMISTFGMLGRTAPFHVYAP 93 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 L + K L V I+ + + +E IP+ R Sbjct: 94 EALGPILQIQLDFFCKGLGFE-----VKFHPIDTTRKIVIYEDRSLTVETIPLEH---RT 145 Query: 172 SSLGFRF 178 + GF F Sbjct: 146 PTCGFLF 152 >gi|28378827|ref|NP_785719.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum WCFS1] gi|254557033|ref|YP_003063450.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum JDM1] gi|28271664|emb|CAD64570.1| metal-dependent hydrolase of the beta-lactamase superfamily III (putative) [Lactobacillus plantarum WCFS1] gi|254045960|gb|ACT62753.1| beta-lactamase superfamily hydrolase [Lactobacillus plantarum JDM1] Length = 247 Score = 52.8 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 37/212 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR-GYFLKQKRP--- 105 + +++D G + L E + +D+VL TH H DH + L+ + L+ Sbjct: 27 GDYHLLLDCGSGA-LNALEEILDPLQLDSVLLTHYHHDHTADVGVLQYYWQLRAGERKTP 85 Query: 106 -IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y D + + E + G + + Sbjct: 86 VLPIYG----------------HTADPLNFGALTWANATEGRAYDPAAVNQIGPFDVSFL 129 Query: 165 LQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 +H + + + + + D P + L+ D + Sbjct: 130 PTKH-PVPAYAVKLVERATGQELVFSADTAYLPELA-TFAAGAQLLMTDT-NFAADKTGK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + ++S K + K +LTH+ D+ + Sbjct: 187 MWHMTSAQSGKIAKDARVKKLLLTHLPQDVSF 218 >gi|114763271|ref|ZP_01442695.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pelagibaca bermudensis HTCC2601] gi|114544069|gb|EAU47079.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseovarius sp. HTCC2601] Length = 298 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 93/306 (30%), Gaps = 50/306 (16%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNR--RTRSSLKISRVSERGSNTTVIVDTG 61 + ILG A G+P+ C +T+SSL +S E + Sbjct: 2 QFRARILGAAAGGGLPQWNCGCENCRLARAGEIPSQTQSSLAVSADGENWAILN----AS 57 Query: 62 PDFYMQVLREQVLS--------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 PD Q+ L + +VL T+ DH+ G+ L++ +P ++A Sbjct: 58 PDIRAQLAATHELHPTGLRDMPLRSVLLTNGDIDHVAGL-----LTLREMQPFTLFATAG 112 Query: 114 CMKHLFES--FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQH 168 + L E+ F ++ R + P I G V +E + Sbjct: 113 IHEVLAENPIFSALNPSVVTRANVALEAPAEIVPGLTATLFAVPGKVPLYMEGETVETDL 172 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------------K 210 ++G V Y ++L+ + D K Sbjct: 173 VGEQTVGVELKTDTETVFYIPGCALLNDALRQRLRGASLIFFDGTLWRDDEMVRAGLGQK 232 Query: 211 NGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDY-----DMVLKSTPSRVVPAFD 262 G H S+ S+ + + HM+ + + + + D Sbjct: 233 TGKRMGHMSMSGEDGSIAAFAGLEIGRKVFVHMNNTNPVLRPGSEERRAAEDAGWIIGQD 292 Query: 263 GMQFSS 268 GM+ ++ Sbjct: 293 GMEVTA 298 >gi|307319343|ref|ZP_07598771.1| beta-lactamase domain-containing protein [Sinorhizobium meliloti AK83] gi|306894965|gb|EFN25723.1| beta-lactamase domain-containing protein [Sinorhizobium meliloti AK83] Length = 276 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 21/174 (12%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----Q 102 R +I D G ++ E V D V +TH H DHI G+ + + + Sbjct: 37 RCGKEVLIFDAGSGLREAGLSLMSEGVSEFD-VFFTHTHYDHIIGLPYFKPIYRCSSAVR 95 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ + + E + I + + P S + Sbjct: 96 FWSGHLHGTMSTAEMINEFM----RPPWFPVGTGICQASLDTVDFRPGETLSPRKDVSIR 151 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 + H +G+R VA D P L+ + D +I D Sbjct: 152 TMSLVHPG-GCVGYRIEWGGRAVALVYDTEHEPGILDPVLLDFIAGADLMIYDC 204 >gi|81428702|ref|YP_395702.1| metallo-beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78610344|emb|CAI55393.1| Putative hydrolase, metallo-beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 562 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F Q L++ I A++ TH H DHI G+ +FL+Q Sbjct: 35 IVIDAGIKFPEDELLGIDYVISDYQYLQKNQQKIKALVITHGHEDHIGGL----PFFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + VYA P + + Sbjct: 91 VPNVPVYAGPLALALIR 107 >gi|241764834|ref|ZP_04762839.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] gi|241365629|gb|EER60353.1| beta-lactamase domain protein [Acidovorax delafieldii 2AN] Length = 261 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 36/241 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHAD 87 C + RT +S I + +++D G L E++ ++ V TH H D Sbjct: 8 CSGAISQGCRT-TSFLI--------DGHILIDAGTGVGDLTL-EEMHRVNHVFLTHSHLD 57 Query: 88 HIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIE 144 H+ + + + + V+A D + L + F D + P + +E Sbjct: 58 HVAALPLMLDAVSSMRETSVKVHALADTIAALQ---AHIFNNVIWPDFSRIPHPSAPFLE 114 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQN 200 + + + I+ + H + S G+ R G + D P +++ + Sbjct: 115 YSALEVGQLLNVASIDIEVLPAMH-TVPSAGYALRGRTGWWVFSGDTAPNP-AFWQRIND 172 Query: 201 L--DFLIID--------AL-KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 L L+I+ AL K LH S +L++ L ++P+ + ++ + Sbjct: 173 LPVAMLVIETAFSNREKALAKRSLHLSPKTLADGLAL---LSPQQSFPIYISHTKPTETA 229 Query: 250 L 250 L Sbjct: 230 L 230 >gi|167519805|ref|XP_001744242.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777328|gb|EDQ90945.1| predicted protein [Monosiga brevicollis MX1] Length = 769 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 98/303 (32%), Gaps = 66/303 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKI-SRVSERGSNTTVIVDTGPDFYMQ 67 LG G+++ P R +S+ + E T+++D G Q Sbjct: 456 FLGTGSAV----------------PSKYRNVTSMLVAQHDDEAALQWTLLMDAGEGSTAQ 499 Query: 68 VLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAP 112 +LR E + + V +H HADH+ G+ GL + + P+ + Sbjct: 500 LLRLLGPTAQAEHLAKLAVVHISHVHADHLLGMPGLMRARKRARAARGEPNSPLCIVGPM 559 Query: 113 DCMKHLFE------------SFRYCFKA-LDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 MK L +CF A L + + +++ + A + Sbjct: 560 AIMKVLRTVGFVPKRDFYFLRNDFCFPAELQQDESSEVEDSGLVKATRDALASTLAKMQL 619 Query: 160 EAIPILQQHGRISSLGF-----RFGNVAYCTDVNAFPAESLE-KLQNLDFLIIDALKNGL 213 + H R + G R ++ + D P + ++D +I +A Sbjct: 620 SLQTLPVNHCR-HATGLSLRSTRGWSLTWSGDTR--PCDVFARFCPDVDLMIHEATFEAE 676 Query: 214 HSS------HFSLSESLKKIELINPKNAILTHMHVDLDY----DMVLKSTPSRVVPAFDG 263 + H + E++ + +LTH + + P+ V AFD Sbjct: 677 LQADAVGKRHSTTEEAITIANDTRARALLLTHFSQRYPRIPKPESAKPNMPTAV--AFDL 734 Query: 264 MQF 266 M Sbjct: 735 MSI 737 >gi|21358013|ref|NP_651658.1| cleavage and polyadenylation specificity factor 100, isoform A [Drosophila melanogaster] gi|18203548|sp|Q9V3D6|CPSF2_DROME RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|5679134|gb|AAD46873.1|AF160933_1 LD14168p [Drosophila melanogaster] gi|7301732|gb|AAF56844.1| cleavage and polyadenylation specificity factor 100, isoform A [Drosophila melanogaster] Length = 756 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D L+ QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY-----CFKALDDRTYP-----PIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F D + I + + +K G Sbjct: 83 PIYATIPVFK-MGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N L++LQ LI Sbjct: 142 YGISITPLNAGHMIGGTIWKI-VKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|224074766|ref|XP_002186980.1| PREDICTED: elaC homolog 2 (E. coli) [Taeniopygia guttata] Length = 581 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 105/297 (35%), Gaps = 64/297 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ P R SS ++ + R ++++D G + Sbjct: 309 EIVFLGTGSAI----------------PMKIRNVSSTLVNTSATR----SLLLDCGEGTF 348 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLK-------QKRPIDVYAA 111 Q+ R +D AV +H H DH G+ + + P+ + A Sbjct: 349 GQLCRHYGEQVDQVLCNLVAVFVSHMHTDHHSGLVNILMERRRALAALGQAFSPLFLVAP 408 Query: 112 PDCMKHLFESFRYC------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 M L E +C K + ++ I + + + + + E Sbjct: 409 EQIMPWLHEYHNHCEEILGDIKMIPSQSLVKGCENIRPKAKEFVSSLLESYDLAEFQTCE 468 Query: 166 QQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KN 211 QH + I G++ V Y D P +L ++ +N + LI +A K Sbjct: 469 VQHCKNAFACSVIHKSGWK---VVYSGDT--MPCMALVQMGKNANLLIHEATLEDGMEKE 523 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV---LKSTPSRVVPAFDGMQ 265 + +H + S++++ +N + +L H Y + + +V AFD M+ Sbjct: 524 AIEKTHSTTSQAIQTGMKMNAEFIMLNHFSQR--YAKIPLFSEDFSDKVGIAFDHMR 578 >gi|315608068|ref|ZP_07883061.1| ribonuclease Z [Prevotella buccae ATCC 33574] gi|315250537|gb|EFU30533.1| ribonuclease Z [Prevotella buccae ATCC 33574] Length = 304 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 58/174 (33%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L PT N +S + +VD G MQ+ Sbjct: 8 ILGCGSAL-------------PTLKHNA---TSQVVEI-----REKLFMVDCGEGTQMQL 46 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R + I AV +H H DH G+ G+ F R + VYA L Sbjct: 47 RRSHIRFTKISAVFISHLHGDHCFGLIGMISTFGMLGRTASLHVYAPEALGPMLQSQLDL 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L+ ++ + + +E IP+ R G+ F Sbjct: 107 FCQGLEFEVV-----FHAVDPKVNKVVYEDRSLTVETIPLNH---RTPCCGYLF 152 >gi|309792598|ref|ZP_07687060.1| metal-dependent hydrolase [Oscillochloris trichoides DG6] gi|308225412|gb|EFO79178.1| metal-dependent hydrolase [Oscillochloris trichoides DG6] Length = 280 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 21/177 (11%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PP 136 +L +H + DHI G+ + +Y L + + Y Sbjct: 68 LLISHTYWDHILGLP-FPALVHIPGNRLHIYGPDSTRGSLQMVYDGMLSPVYSPVYGLAH 126 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQ-QHGRISSLGFRFG----NVAYCTDVNA-- 189 I + G I A+P+ Q +H I + +R +V Y TDV Sbjct: 127 IGATHSFQPISTT-PFMVGGLRISAMPLSQRKHSPIWA--YRVEEGSRSVVYITDVRYTN 183 Query: 190 --FPAESLEKLQNLDFLIIDALKNGLH-----SSHFSLSESLKKIELINPKNAILTH 239 ++L L+ A H H + ++++ + + +L H Sbjct: 184 DLIWQQALHFADRASILVHSA-PYTRHEQVQDYGHSRVEDAIELAQKAGAEQLMLFH 239 >gi|119474698|ref|ZP_01615051.1| ribonuclease Z [marine gamma proteobacterium HTCC2143] gi|119450901|gb|EAW32134.1| ribonuclease Z [marine gamma proteobacterium HTCC2143] Length = 347 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 72/222 (32%), Gaps = 43/222 (19%) Query: 9 ILG-----CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG CG+S +P DP+ R ++ + + R N +VD G Sbjct: 49 FLGLEVMVCGSSSPLP---------DPS-----RAQACIMV-----RAGNRIFLVDAGSG 89 Query: 64 FYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLF 119 + E V I +L TH H+DHI I + + + + + + Sbjct: 90 SAEVLRLEGVPMQLIGTILLTHFHSDHISAIADVNLGSWVAGRPARLQIVGPEGV-NSVV 148 Query: 120 ESFRYCF-------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI- 171 F + A + P V + P + A + H I Sbjct: 149 AGFNLAYGLDRSYRTAHHGEDFLPSVLGALQAQTITPGVIY-AEDELTITAFEVDHAPIS 207 Query: 172 SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 ++G+RF +V D ++ D L+ DAL Sbjct: 208 PAVGYRFDYMGRSVVVTGDTI-VTKGIEVAAKDADLLLTDAL 248 >gi|326334912|ref|ZP_08201113.1| ribonuclease Z [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692949|gb|EGD34887.1| ribonuclease Z [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 302 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHP 84 C +P+ + ++ + ++D G LR+ + I + +H Sbjct: 8 CHSASPREKARTTAQLLEMRGHL-----FLIDCGEGT-QMALRQSSTKFARIKHIFISHL 61 Query: 85 HADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H DH +G+ GL F Q R + ++A + + + + +P ++ Sbjct: 62 HGDHFYGLAGLISTFQLQGREAELHIHAPKGAKEAMLLLLK---VSGAHMVFP--LHFHE 116 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +E+ + + + + IP+ RI + GF F Sbjct: 117 LESQESEVIFEDDKLSVTTIPLDH---RIYANGFFFK 150 >gi|303238608|ref|ZP_07325141.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus CD2] gi|302593727|gb|EFL63442.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus CD2] Length = 514 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 86/221 (38%), Gaps = 27/221 (12%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + ++++D G DF + ++ + ID ++ TH H DHI G+D + Sbjct: 154 SILVETP----NGKSLLIDAGNNEDGDFVVSYIKSKGLNKIDVIVGTHYHEDHIGGLDTV 209 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP---PIVNPIVIENNDVPICM 152 + +Y + F A ++ + ++D+ + + Sbjct: 210 IN-NFDIGK---IYMPNAT----TQVFEDVLIAAKNKNLKINTAKAGVNIDLDSDLEVSI 261 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + G L + + L ++ + + D E L + L D LK G Sbjct: 262 LAPVGNTYED--LNNYSAVIKLTYKNNSFLFEGDAGNISES--EMLSSGSNLKADVLKVG 317 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 H S+ S +E ++ ++PK A+++ + D DY K T Sbjct: 318 HHGSNDSTTE--PFLKAVSPKYAVIS-VGKDNDYWYPTKQT 355 >gi|322436584|ref|YP_004218796.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX9] gi|321164311|gb|ADW70016.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX9] Length = 554 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 44/139 (31%), Gaps = 30/139 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D G F + L E + A++ TH H DHI G+ Sbjct: 25 RWQDDIIVIDAGLMFPEEELLGVDIVVPDISYLTENRTKVKAIILTHGHEDHIGGL---- 80 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + L + + VY + + + + +IE K + Sbjct: 81 PWILSELN-VPVYGTEFTL---------ALAEGKLDEHRLLDDADLIEMIP---GKKFSI 127 Query: 157 GVIEAIPILQQHGRISSLG 175 G PI H + + Sbjct: 128 GPFTIQPIHVTHSLVDCVA 146 >gi|15921184|ref|NP_376853.1| hypothetical protein ST0948 [Sulfolobus tokodaii str. 7] gi|41017574|sp|Q973F1|RNZ_SULTO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|15621969|dbj|BAB65962.1| 293aa long hypothetical elaC protein [Sulfolobus tokodaii str. 7] Length = 293 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 92/289 (31%), Gaps = 70/289 (24%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +G G G P N+R ++ + R + D G ++ Sbjct: 6 FIGTG--GGAP---------------NKRGLPAIMVRREGFDA-----LFDCGEGTQWRM 43 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + + I + TH H DH+ G+ G+ +K + + + + L + F+ Sbjct: 44 MEHNLSFMKIKLIGITHMHGDHVLGLPGMIETMGMYSRKESLLLMGPKELKEFLEDIFKK 103 Query: 125 CFKAL------------DDRTYPPIVNPIVIENN------------DVPICMKSAGGVIE 160 + ++ IE+ D+ K Sbjct: 104 TYFYPNFEIQIIDKYEDENIKISTFETCHTIESQGYLFEEKDRLKIDIDKLRKEGIKDWR 163 Query: 161 AIPILQQHGRISSLG-------FRFG----NVAYCTDVNAFP-AESLEKLQNLDFLIIDA 208 I +L++ R+ G + +AY D P + + ++++D LI D+ Sbjct: 164 IIRMLKEGKRVEINGKVLLPEDYLIVKKGIRIAYTGDTG--PCEKVINAVKDVDLLIHDS 221 Query: 209 L----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD--YDMVLK 251 K H + ++ N K L H+ D Y+M++K Sbjct: 222 TFIDEKEAYKYGHSNSYDAAYVALKANVKRLALFHISPRYDDTYEMLIK 270 >gi|322805691|emb|CBZ03256.1| ribonuclease Z [Clostridium botulinum H04402 065] Length = 346 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL ++ + +++D G Sbjct: 2 LDLALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 41 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITG 100 Query: 118 LFESFRYC 125 L Y Sbjct: 101 LRTIVPYL 108 Score = 39.7 bits (92), Expect = 0.43, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 247 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAIKNKHMTFREGAKLANRGKVSQL 305 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 306 ILTHFSPAM 314 >gi|257457788|ref|ZP_05622949.1| metallo-beta-lactamase family protein [Treponema vincentii ATCC 35580] gi|257444838|gb|EEV19920.1| metallo-beta-lactamase family protein [Treponema vincentii ATCC 35580] Length = 321 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 41/230 (17%) Query: 49 ERGSNTTVIVDTGPDFYMQV--LREQVLSID-----AVLYTHPHADHIHGIDGLRGYF-- 99 E +I D G L+ + D + ++H H DH+ G+ +F Sbjct: 68 ETEEGNHIIFDAGTGIRELGINLQNRFDYFDRPQTYHLFFSHFHWDHVQGL----PFFGP 123 Query: 100 -LKQKRPIDVYAA-PDCMKHLFESFRYCFKA---LDDRTYPPIVNPIVIENNDVPICMKS 154 + I VY+ P + L E ++ + + I ++ I + + Sbjct: 124 AYDSRNTIIVYSTRPKMREFLEEQMKWPYFPITMFGKGGFTAKFEFRCIAPDEPYIHIGN 183 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGN---VAYCTDVNAFP------AESLEKLQNLDFLI 205 +H F N + + TD P ++ +++ LI Sbjct: 184 TKIGWH----RVRHPGGCVAYSIFDNQKKIIFSTDTELRPQDFEKNDTNIAFYSDVELLI 239 Query: 206 IDALKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 IDA + + S H + S ++ K L H + Y+ Sbjct: 240 IDA-QYTMTDSIEKIGWGHSTFSLAIDFATSWGIKKLAL--FHHEPTYND 286 >gi|229183901|ref|ZP_04311117.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228599553|gb|EEK57157.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] Length = 564 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + G Sbjct: 92 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHAES-----EIDLGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGNVVHTGDFK 172 >gi|229918679|ref|YP_002887325.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229470108|gb|ACQ71880.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 555 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+E + A+ TH H DHI G+ Y L+ + + VY + + + Sbjct: 60 LKENKDRVRAIFITHGHEDHIGGL----SYVLRDLKHVPVYGTKLTLGLIELKLKEA--- 112 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ + + D + A I H +G G + + Sbjct: 113 -------GLLKEVDLRMIDAKTKLTIADHFITF--FRVNHSIPDCVGVCIQTSQGAIVHT 163 Query: 185 TDVN 188 D Sbjct: 164 GDFK 167 >gi|153941285|ref|YP_001390737.1| ribonuclease Z [Clostridium botulinum F str. Langeland] gi|152937181|gb|ABS42679.1| ribonuclease Z [Clostridium botulinum F str. Langeland] gi|295318810|gb|ADF99187.1| ribonuclease Z [Clostridium botulinum F str. 230613] Length = 346 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL ++ + +++D G Sbjct: 2 LDLALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 41 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITG 100 Query: 118 LFESFRYC 125 L Y Sbjct: 101 LRTIVPYL 108 Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 247 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAIKNKHMTFREGAKLANKGKVSQL 305 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 306 ILTHFSPAM 314 >gi|108762871|ref|YP_633509.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108466751|gb|ABF91936.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 248 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGL 95 S + + ++VD ++RE + AV TH HADH G++ L Sbjct: 21 SCFAVEAEDQVLLVDCPHPIRK-MMREASESSGVPLDADRVSAVALTHLHADHASGLESL 79 Query: 96 RGY-FLKQKRPIDVYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICM 152 + F +R ++V A P L+E ++ R PP P+ Sbjct: 80 GYFSFFVLQRKLEVLAHPAVADRLWEGNLAAGMECLIERRGEPPNDKHFEDYFRHTPLST 139 Query: 153 KSAG--GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLII 206 ++A G + H + + R + Y D AF ++ L D +I Sbjct: 140 ETAVRHGPFLIESRMTYH-HVPTTALRIHAGGRCLGYSADT-AFDEGLIDWLSKADLII- 196 Query: 207 DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + H + + L H Sbjct: 197 ---HETNYGVHTPYEKLAALPAELRA-RMRLIH 225 >gi|89895122|ref|YP_518609.1| hypothetical protein DSY2376 [Desulfitobacterium hafniense Y51] gi|89334570|dbj|BAE84165.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 552 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L ++ I + TH H DHI G+ L K + VY M + Sbjct: 54 LEKRKHKIQGIFITHGHEDHIGGLPFLLP-----KLEVPVYGTKLTMGLVR-------AK 101 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L +R P VI+ + + H ++G+ G V Y Sbjct: 102 LRERGGYPEDLLRVIDPGE-----PVKAKDFQVEAFRVTHSIPDAVGYGILTPLGRVIYT 156 Query: 185 TDVN 188 D Sbjct: 157 GDFK 160 >gi|301789437|ref|XP_002930135.1| PREDICTED: LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2-like [Ailuropoda melanoleuca] Length = 816 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 102/303 (33%), Gaps = 66/303 (21%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K Y LG G++ +P + S + +S ++++D G Sbjct: 465 KQYPEIVFLGTGSA--IPM---------------KIRNVSATLVNISPD---RSLLLDCG 504 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ +D AV +H HADH G+ + ++ +P Sbjct: 505 EGTFGQLCHHYGDEVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPCPPL 563 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------E 160 V A L C + L + P P + G ++ E Sbjct: 564 LVVAPTQLKAWLQLYHNQCQRLLQHVSLIPAKCLQKGAEVSSPAVERLIGSLLAACDLEE 623 Query: 161 AIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----ID 207 L +H + + + G++ V Y D P ++L ++ ++ LI D Sbjct: 624 FQTCLVRHCKHAFGCALVHTSGWK---VVYSGDT--MPCKALVQMGKDATLLIHEATLED 678 Query: 208 ALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDG 263 L+ +H + S+++ +N +L H Y V +P +V AFD Sbjct: 679 GLEEEAVEKTHSTTSQAIGVGVQMNAGFTMLNHFSQR--YAKVPLFSPDFNEKVGIAFDH 736 Query: 264 MQF 266 M+ Sbjct: 737 MKV 739 >gi|226226486|ref|YP_002760592.1| hypothetical protein GAU_1080 [Gemmatimonas aurantiaca T-27] gi|226089677|dbj|BAH38122.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 316 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 62/217 (28%), Gaps = 30/217 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + ++ D G + + V TH H+DH G+ + + + ++ P Sbjct: 70 GDRVLLFDAGAGVMRRAAAAGLPIDGFTHVFLTHLHSDHTLGLPDVLLTPWVMGRRTPQR 129 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPI 164 + P M + + ++ D + DV ++ + Sbjct: 130 LSGPPGTM-RMVDRIVDAWREDVDVRVSGQERLPRVPGGDVREITGGVVYDSAGLKVTAV 188 Query: 165 LQQHGRI-SSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLH 214 HG ++L + + D P ++ D L+ + LK Sbjct: 189 RVPHGAWSTALAYVITTPTRRLVLSGDTGPSPELQAAA-RDADVLVHETYPEVRLKPEDR 247 Query: 215 SS-----------HFSLSESLKKIELINPKNAILTHM 240 H S E K +L+H+ Sbjct: 248 PGGEEWPAYMRTVHTSDREVGALAAAARVKQVVLSHI 284 >gi|108760258|ref|YP_630920.1| putative cAMP phosphodiesterases class-II [Myxococcus xanthus DK 1622] gi|108464138|gb|ABF89323.1| putative cAMP phosphodiesterases class-II [Myxococcus xanthus DK 1622] Length = 251 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 29/177 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC G+ C + + V + +D G Sbjct: 1 MKLRVLGC--------HGGELPNCKS---------TCFLVDDV--------LALDAGALT 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAAPDCMKHLFESFR 123 L E + +D VL H H DH+ + + + ++ P+ +YA+ +C + L ++ Sbjct: 36 GTLSLDE-LCRVDHVLVGHSHFDHVKDLPLMADLVIGRRDTPVTIYASRECARALRDNMF 94 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 D P P V++ G + H + S GF N Sbjct: 95 NNALWPDFTRIPTKRKP-VLQIKTFRAGSSFQVGPYTVRSVPVSH-PVESCGFIISN 149 >gi|290960543|ref|YP_003491725.1| ribonuclease Z [Streptomyces scabiei 87.22] gi|260650069|emb|CBG73185.1| Ribonuclease Z [Streptomyces scabiei 87.22] Length = 302 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 90/330 (27%), Gaps = 92/330 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDAQGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI-------------------------- 92 G Q+LR V ++ + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDLNRICVTHFHGDHSLGLAGVIQRINLDRVPHEVTAHYPRSGQR 98 Query: 93 --DGLRGY------FLKQKRPIDV----------Y-AAPDCMKHLFESFRYCFKALDDRT 133 D LR + P+D Y + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVQLVQAPVDGDGGTLAADSSYTLDARRLSHPVESYGYRLVEPDGRR 158 Query: 134 -YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP 191 P + I D+ I + A G + + + R A+ D Sbjct: 159 MLPERLAERGIAGPDIGRIQREGAVGDVTLDDVSEPR--------RGQRFAFVMDT-RLC 209 Query: 192 AESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV--- 242 D L+I++ ++ + H + ++ ++ +LTH Sbjct: 210 DGVYALADAADMLVIESTFLDEDVQLAVDHGHLTAGQAASVARDCGVRHLVLTHFSQRYT 269 Query: 243 ---DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 + + + A D M+ + P Sbjct: 270 EPAEFERQARAAGFEGELTVAHDLMRVALP 299 >gi|259507475|ref|ZP_05750375.1| ribonuclease J (RNase J) [Corynebacterium efficiens YS-314] gi|259164963|gb|EEW49517.1| ribonuclease J (RNase J) [Corynebacterium efficiens YS-314] Length = 584 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 28/153 (18%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + + ++A++ TH H DHI Sbjct: 42 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IENHLNRVEALVVTHGHEDHIGA 94 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + I + + + + + + P +IE N+ Sbjct: 95 I----PWLLKLRHDIPIIGSRFTLALIAAKCK-----------EHRLRPKLIEVNEQS-- 137 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 G H LG A Sbjct: 138 -NENRGPFNIRFWAVNHSIPDCLGLAIKTPAGL 169 >gi|291546944|emb|CBL20052.1| RNAse Z [Ruminococcus sp. SR1/5] Length = 303 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 94/317 (29%), Gaps = 81/317 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG + +P RR ++ + R + +++++D G Sbjct: 6 LLGCGGMMPLP----------------RR-----WLTALMTRYNGSSLMIDCGEGT-QVA 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGI----------DGLRGYF-------------LKQ 102 ++E+ ID + +TH H DHI G+ D L+ Sbjct: 44 IKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGNADRTEPLTLVGPRGLERVVSALRV 103 Query: 103 KRP--------IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 P I++ + ++ F+ + T I+ + P + Sbjct: 104 IAPELPFEIKFIEITKPEEVLELNGYRIT-AFRVNHNVTCYGYTLEILRQGKFSPDSARE 162 Query: 155 AGGVIEAIPILQQ------HGRISSLGFRFG------NVAYCTDVNAFPAESLEKLQNLD 202 ++ LQ+ GRI + G + Y TD L + D Sbjct: 163 HEIPLKFWNPLQKGQTVEDEGRIYTPDMVLGPPRKGIKLTYTTDTRP-TESILRNAKGSD 221 Query: 203 FLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL----DYDMVLK 251 I D ++ H + E+ LTH L DY ++ Sbjct: 222 LFICEGMYGEDDKIEKAKGYKHMTFREAATLARDAEVGEMWLTHYSPSLVRPDDYMDTVR 281 Query: 252 STPSRVVPAFDGMQFSS 268 + P DG Sbjct: 282 EIFPKAWPGKDGKSVEL 298 >gi|297571670|ref|YP_003697444.1| beta-lactamase [Arcanobacterium haemolyticum DSM 20595] gi|296932017|gb|ADH92825.1| beta-lactamase domain protein [Arcanobacterium haemolyticum DSM 20595] Length = 266 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 85/261 (32%), Gaps = 52/261 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT----VIVDT 60 TI+GC S+ + A SS I + T ++VD Sbjct: 1 MKLTIIGCSGSMS----GMESAA------------SSYLIQADGLDVNGLTRTFSIVVDF 44 Query: 61 GPDFYMQVLRE-QVLSIDAVLYTHPHADHIH---GIDGLRGYFLKQKRP-IDVYAAPDCM 115 GP Q+LR +DA+ +H HADH G+ R ++ + P + VY+ D Sbjct: 45 GPGAMGQLLRYVDPARVDAMFLSHLHADHCADMVGMQVYRRWYPEGALPQVPVYSPGDGA 104 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 TY + + DV G + H + +L Sbjct: 105 ARTRG----LSDDDPAETYETEFDFHQVHARDV-----VNVGPLRVEFFTAWH-TVPTLA 154 Query: 176 FRFGN------------VAYCTDVNAFPAESLEKLQNLDFLIIDAL----KNGLHSSHFS 219 R + Y D + P + ++ D ++ +A ++ + H + Sbjct: 155 LRISGPSEDPELGRDVVLTYTGDTDTAP-SVADAERDADLVLSEAAFEEGRDTVRGVHLT 213 Query: 220 LSESLKKIELINPKNAILTHM 240 + + + +LTH+ Sbjct: 214 GLRAGEIAAEAGARRLVLTHL 234 >gi|15639805|ref|NP_219255.1| ribonuclease Z [Treponema pallidum subsp. pallidum str. Nichols] gi|189026043|ref|YP_001933815.1| ribonuclease Z [Treponema pallidum subsp. pallidum SS14] gi|41017518|sp|O07896|RNZ_TREPA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808682|sp|B2S457|RNZ_TREPS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|2196998|gb|AAB61269.1| Orf310 [Treponema pallidum] gi|3323126|gb|AAC65782.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018618|gb|ACD71236.1| hypothetical protein TPASS_0819 [Treponema pallidum subsp. pallidum SS14] Length = 310 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 58/182 (31%), Gaps = 39/182 (21%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M ILGCG VP R +S+ + R E + D Sbjct: 1 MHMNLEAFILGCG--GMVPLP--------------HRHLTSVLLRREGEL-----FLFDA 39 Query: 61 GPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDC 114 G LR + I A+ +H HADHI G+ GL + R +Y P Sbjct: 40 GEGTQVSLRRLSLRWK--KISAIFISHTHADHITGLPGLLMLSSQVARSEPLYIIGPPRT 97 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 +++ S R +N +I + + G + H + + Sbjct: 98 AEYVETS---------RRILDMYINYEIIVKEVIEPQVVYRGKDFQVRCFCLDHTK-PCM 147 Query: 175 GF 176 G+ Sbjct: 148 GY 149 >gi|116751502|ref|YP_848189.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700566|gb|ABK19754.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 255 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 80/240 (33%), Gaps = 32/240 (13%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYA 110 + +++D G + + E+ I + TH H DHI GI L + Q + + + Sbjct: 24 DDFLLMDAG-TVSLSLESEEQCRITHIFLTHAHLDHIKGIPFLVDNIVSSGQGCRLSILS 82 Query: 111 APDCMKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 D + L + F + D + P V+ ++ + G H Sbjct: 83 GKDVIADLKRN---IFNNRIWPDFSTIPDAENPVMRYREISTRGRIQVGDYSIYATRVNH 139 Query: 169 GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDF--LIIDALKNGL-------- 213 + + G+ N + Y D ++++ LI + Sbjct: 140 A-VPTYGYMIENRSSTALVYTGDT-GPTERIWKRMRGHRVSALIAEVSFPDELEELALAS 197 Query: 214 -HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST----PSRVVPAFDGMQFSS 268 H + L + K+ +I P+ +TH+ + K +R+ DGM + Sbjct: 198 GHLTPSLLETEITKMPVI-PQTIYITHL-KPFHKATIKKQLARIRKTRIEILRDGMVITV 255 >gi|15834736|ref|NP_296495.1| hypothetical protein TC0111 [Chlamydia muridarum Nigg] gi|270284903|ref|ZP_06194297.1| hypothetical protein CmurN_00565 [Chlamydia muridarum Nigg] gi|270288931|ref|ZP_06195233.1| hypothetical protein CmurW_00585 [Chlamydia muridarum Weiss] gi|7190146|gb|AAF38990.1| conserved hypothetical protein [Chlamydia muridarum Nigg] Length = 262 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 74/229 (32%), Gaps = 57/229 (24%) Query: 56 VIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++VD G Q + + + S+D +L TH H+DHI G+ R + + Sbjct: 25 ILVDLG--ISKQAVVDALHSMDIPPEDIQGILITHEHSDHIAGL---RSFIKTY--RTPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L + C + + H Sbjct: 78 ICNIETARSLRQLLDLC-----------------PTFKIFTTGHNFSMEDLRIQTFNVPH 120 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS- 216 + +GF F + +CTD+ + L + D+L+I++ L++ S Sbjct: 121 DAVDPVGFIFQYSGVKLGFCTDLGWGTSWITHLLYDCDYLLIESNHDPEMVLQSSRPESC 180 Query: 217 ---------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S +E + + K L H+ L+ + K+ Sbjct: 181 KQRILSKQGHISNAECGALLRQVLTPRIKKIYLAHLS--LECNTAEKAL 227 >gi|312135668|ref|YP_004003006.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] gi|311775719|gb|ADQ05206.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor owensensis OL] Length = 821 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 67/219 (30%) Query: 45 SRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLR-- 96 S V + +++D+G Q+LRE + +D L +H H DHI + + Sbjct: 15 SCVLIKAGGKNILIDSGIRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLPLIARE 73 Query: 97 ---GYFLKQK---------------------RPIDVYAAPDCMKHLFES----FRYCFKA 128 +F + I +YA + L + F Y F+ Sbjct: 74 YPHIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFNYTFEP 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ ++ + + I + G++ Y D + Sbjct: 134 VEGIRVTFFPAGHILGASMIFIQTQE------------------------GSILYTGDFS 169 Query: 189 -----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S+ K++ D +I ++ ++ S E Sbjct: 170 ADKQLTVDRASVPKIR-PDIVICESTYGDRLHTNRSFEE 207 >gi|325982780|ref|YP_004295182.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] gi|325532299|gb|ADZ27020.1| cyclic-AMP phosphodiesterase [Nitrosomonas sp. AL212] Length = 254 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 25/206 (12%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAA 111 + V++D G + E V ID VL TH H DH+ I L + +PI ++A Sbjct: 24 DDDVLIDAGTGVGNLTIEEMVR-IDHVLVTHAHLDHVAFIPFLVDTVGSMRAKPIIIHAI 82 Query: 112 PDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P + L + + F D T P+ + + + + P+ H Sbjct: 83 PATLDILQK---HLFNWYLWPDFTKIPVATMPYMRYEALALNQTLCLNQRKITPLPAHH- 138 Query: 170 RISSLGFRFG----NVAYCTDVNAFPAE--SLEKLQNLDFLII---------DALKNGLH 214 I ++G++ ++ + D A ++ K++NL +LII D + H Sbjct: 139 TIPAVGYQLDSGQASLVFTGDTTTNDALWIAVNKIENLKYLIIESAFCNRKRDIAQRSRH 198 Query: 215 SSHFSLSESLKKIELINPKNAILTHM 240 L+E LKK+E +TH+ Sbjct: 199 YCPSLLAEDLKKLERTA--EIFITHL 222 >gi|170757593|ref|YP_001781028.1| ribonuclease Z [Clostridium botulinum B1 str. Okra] gi|169122805|gb|ACA46641.1| ribonuclease Z [Clostridium botulinum B1 str. Okra] Length = 346 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL ++ +++D G Sbjct: 2 LDLALLGCGGGMPIP----------------DRFLSSLLMNYRG-----RKILIDCGEGT 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 41 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITG 100 Query: 118 LFESFRYC 125 L Y Sbjct: 101 LRTIVPYL 108 Score = 41.3 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 247 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAIKNKHMTFREGAKLANRGKASQL 305 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 306 ILTHFSPAM 314 >gi|325662473|ref|ZP_08151076.1| ribonuclease Z [Lachnospiraceae bacterium 4_1_37FAA] gi|331086255|ref|ZP_08335335.1| ribonuclease Z [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471169|gb|EGC74394.1| ribonuclease Z [Lachnospiraceae bacterium 4_1_37FAA] gi|330406021|gb|EGG85544.1| ribonuclease Z [Lachnospiraceae bacterium 9_1_43BFAA] Length = 304 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 94/287 (32%), Gaps = 62/287 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++++D G + ++E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTALMTRFNGSSLLIDCGEGTQI-AIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ P+ + + L F +K ++ +N ++ V Sbjct: 78 GNADRREPLTLIGPKGLERVVSALRVIAPELPFPIIYKEIEGPEQTFELNGYRLKAFRVN 137 Query: 150 ICMKSAGGVIEA---------------IP-----------ILQQHGRI----SSLGF--R 177 + G +E IP ++ G + LG R Sbjct: 138 HNVLCYGYTLEIDRAGKFDVTRAMGHAIPKQYWKHLQKGETIEHEGNVFTPDMVLGAPRR 197 Query: 178 FGNVAYCTDVNAFPAESLEK-LQNLDFLIIDALKNGLHS-------SHFSLSESLKKIEL 229 + Y TD P +S+ ++ D I + + H + E+ + + Sbjct: 198 GIKLTYTTDTR--PTDSIRVNAKHSDLFICEGMYGEKEKACKAVEYKHMTFYEAAQLAKE 255 Query: 230 INPKNAILTHMHVDLDY-----DMVLKSTPSRVVPAFDGMQFSSPIP 271 K LTH L + V K P + D M P Sbjct: 256 AEVKEMWLTHYSPSLTRPEFFIEEVQKIFP-QAKAGSDSMSVELDFP 301 >gi|294677077|ref|YP_003577692.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] gi|294475897|gb|ADE85285.1| metallo-beta-lactamase family protein [Rhodobacter capsulatus SB 1003] Length = 558 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 41/165 (24%), Gaps = 35/165 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + G ++VD G F L V IDA+ TH H D Sbjct: 20 AYVYGYGPEGKERLIVVDLGVTFPDMDGSPGVDLIMADTAWLEANVNRIDAIFLTHGHED 79 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI + L K V+A + + V+E Sbjct: 80 HIGAMPHLWP-----KLRAPVFARRFTAALVAIKM--------EEAGLASDMIRVVEPRP 126 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I + G + H S G V + D Sbjct: 127 KAIDV----GPFRVQFVPVSHSIPESSALIIDTPAGRVVHTGDFK 167 >gi|89096796|ref|ZP_01169688.1| YycJ [Bacillus sp. NRRL B-14911] gi|89088811|gb|EAR67920.1| YycJ [Bacillus sp. NRRL B-14911] Length = 264 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 50 RGSNTTVIVDTGPDFYMQV------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + IVD G Q+ + + ++ +L TH H+DHI G+ + +K Sbjct: 20 EADGQSFIVDAGLS-GKQMEALIKQIDRSLGNLSGILVTHEHSDHIKGVG-----IVARK 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA + + I + + + + G ++ Sbjct: 74 YGLPVYANEKTWQAMNGL---------------IGEVPLDQKFTFDMETVKSFGSLDIES 118 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + + F +A TD ++N D + ++ L+ G Sbjct: 119 FGVSHDAAEPMFYIFHHEGKKLALITDTGYVSDRMKGIIKNADAFVFESNHDVQMLRMGR 178 Query: 214 HS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD 243 + H S ++ + + N K+ L H+ D Sbjct: 179 YPWNIKRRILGDFGHVSNEDAALAMSEVAGDNTKSIYLAHLSQD 222 >gi|331266069|ref|YP_004325699.1| hydrolase family protein [Streptococcus oralis Uo5] gi|326682741|emb|CBZ00358.1| hydrolase family protein [Streptococcus oralis Uo5] Length = 309 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + N + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQNSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|149184619|ref|ZP_01862937.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. SD-21] gi|148831939|gb|EDL50372.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. SD-21] Length = 552 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 46/140 (32%), Gaps = 29/140 (20%) Query: 53 NTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 ++VD G F ++++ E+ ++A++ TH H DHI + + Sbjct: 33 GRWLMVDLGMSFSGGQYPGVDLVFADLELIEERTQDLEAIVLTHAHEDHIGAVP-----Y 87 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + +YA P + + + L++ V +IE + + G Sbjct: 88 FAADLGVPIYATPFTAELVR-------RKLEEADLESAVELHIIEEDHGSFRV----GPF 136 Query: 160 EAIPILQQHGRISSLGFRFG 179 E I H Sbjct: 137 EVTYIPLAHSIAEGNALLID 156 >gi|329896592|ref|ZP_08271623.1| Metallo-beta-lactamase family protein, RNA-specific [gamma proteobacterium IMCC3088] gi|328921699|gb|EGG29073.1| Metallo-beta-lactamase family protein, RNA-specific [gamma proteobacterium IMCC3088] Length = 454 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 31/145 (21%) Query: 53 NTTVIVDTGPDFYMQ--VLREQVLS------------IDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F Q LR + +D ++ TH H DHI + Sbjct: 27 GRWLMVDCGITFEQQHNSLRPSIQMADPQFIVSRNQLLDGLIITHAHEDHIGAVP----- 81 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L + +Y P L F + P+ E +VP G Sbjct: 82 YLWAQLRCPIYTTPFTATVLRRKF------------ASLDKPLPNELIEVPPDHIGRIGE 129 Query: 159 IEAIPILQQHGRISSLGFRFGNVAY 183 + + H + +Y Sbjct: 130 FDVRWLQLTHSTPETCALHIQAGSY 154 >gi|294650579|ref|ZP_06727936.1| ribonuclease Z [Acinetobacter haemolyticus ATCC 19194] gi|292823576|gb|EFF82422.1| ribonuclease Z [Acinetobacter haemolyticus ATCC 19194] Length = 320 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP +T R S L I + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLT--------------RNVSGLAIR---NSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + S+ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLALQSLVAICITHVHGDHCYGL 72 >gi|169795042|ref|YP_001712835.1| competence factor involved in DNA uptake [Acinetobacter baumannii AYE] gi|215482592|ref|YP_002324784.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB307-0294] gi|294836599|ref|ZP_06781282.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter sp. 6013113] gi|294860830|ref|ZP_06798599.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter sp. 6013150] gi|169147969|emb|CAM85832.1| Competence factor involved in DNA uptake [Acinetobacter baumannii AYE] gi|213988324|gb|ACJ58623.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB307-0294] Length = 810 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + ++DTG P Q V +D V+ +H DH Sbjct: 565 QHPQQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 615 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 616 --SGAFPIIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 671 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+R N D E L++ L ID L Sbjct: 672 AFVASNQNQYSCVVYLQFKKVD--GYR--NFLIMGDAGW--EAEYELLKDYPNLKIDVLV 725 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 726 LGHHGSKHSS---AYDFLATLKPKLAI 749 >gi|329766162|ref|ZP_08257721.1| ribonuclease Z [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137433|gb|EGG41710.1| ribonuclease Z [Candidatus Nitrosoarchaeum limnia SFB1] Length = 299 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 91/321 (28%), Gaps = 80/321 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A+ P R + + + R E ++ D G Sbjct: 1 MKLVFLGTSAAQ----------------PTENRGLTCICLERDGEI-----LMFDAGEAT 39 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 + L+ + + TH H DH G+ GL Q R P+++Y + + Sbjct: 40 QISYLKSGLGWNKKMKIFVTHLHGDHCVGLLGLLQTMTMQNRTEPLEIYGPKGIEEFIAA 99 Query: 121 ---------SFR---------YCFKALDDRTYPPIVNPIVI------ENNDVPICMKSAG 156 SF F + Y N VI E D P Sbjct: 100 NIKVLNFGLSFPVMITIVNEGKIFDSKIYSVYACKANHSVITYSYLFEEKDKPGRFNLEK 159 Query: 157 GVIEAIPI-----LQQHGRISSLGFRF-------------GNVAYCTDVNAFPAESLEK- 197 IP Q+G +G + + D P + LEK Sbjct: 160 AKALEIPEGKLWNQLQNGIEVKIGEKIINPKQVLGEKRPGKKIGISGDT--MPTKELEKF 217 Query: 198 LQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV----DLDYD 247 + D+L+ D+ H + ++ + KN ILTH + + Sbjct: 218 FEGCDYLVFDSTFLEESKERAEETYHSTAKQAAILGKNAKVKNLILTHFSARYKDETGHL 277 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 K V+ A D ++ Sbjct: 278 EEAKQIHHSVITAKDFLEIEI 298 >gi|167395282|ref|XP_001741307.1| zinc phosphodiesterase [Entamoeba dispar SAW760] gi|165894204|gb|EDR22266.1| zinc phosphodiesterase, putative [Entamoeba dispar SAW760] Length = 636 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 44/280 (15%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + +LG G + VP +N +S R + TTV++D G Sbjct: 356 NKFQVILLGTGGA--VP-----------GKSRN--------VSGEIIRFNKTTVMIDCGE 394 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 QV+ + I+ + TH H DHI GI + +P+ + K L Sbjct: 395 CIAYQVVNSGIHPDDINMLYVTHNHGDHIFGI---MSLLKMRTKPLTIIGPRSMEKGLNL 451 Query: 121 SF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y K + + I+ + + +++ G I + H + + G RF Sbjct: 452 LCQHYHIKINFINNNIFSDDCVDIDKDSIIQNIENTIGA-HIITVKLNH-QAENYGIRFE 509 Query: 180 ----NVAYCTDVNAFP-AESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIE 228 +V + D P + N D+++ + + +H + S+ ++ Sbjct: 510 INGTSVVFTGDT--LPCLNDKKLCMNADYVVHECNFEDGMESEAVSRTHSTPSQIESVLK 567 Query: 229 LINPKNAILTHMHV--DLDYDMVLKSTPSRVVPAFDGMQF 266 N K +L H+ D++ K + ++ +FDGM F Sbjct: 568 DCNNKVIVLNHIGQRTSKFADIMKKEYLTPMIYSFDGMVF 607 >gi|118444909|ref|YP_878846.1| metallo-beta-lactamase superfamily protein [Clostridium novyi NT] gi|118135365|gb|ABK62409.1| Metallo-beta-lactamase superfamily protein [Clostridium novyi NT] Length = 438 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 87/230 (37%), Gaps = 24/230 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ + ++++D G + ++ + + +D V+ THPH DHI G+D + Sbjct: 78 SILITE-----KDHSMLIDGGNNADGTMVVDYLKKMGIKKLDYVVGTHPHEDHIGGLDNV 132 Query: 96 RGYFLKQKRPIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 F K + K + + + T P + + + I Sbjct: 133 INAFNIGKIYMPSKMNNTKTYKDVITAIK---NKGMKITLPKPGDTFKLGDASCTIVAPK 189 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 A E++ + + L + + + D A E LQ + D LK G H Sbjct: 190 ANKDYESV---NDYSIVIKLTYGKTSFLFTGDAEALSES--EILQGGYDIKADVLKIGHH 244 Query: 215 SSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPSRVVPAF 261 S S +++ ++ ++PK A+++ + + SR +P + Sbjct: 245 GSRTSSTDA--FLDKVSPKYAVISCEKGNDYGHPHKATMDKLKSRNIPVY 292 >gi|118379827|ref|XP_001023079.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila] gi|89304846|gb|EAS02834.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila SB210] Length = 808 Score = 52.4 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 27/100 (27%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG C P R SS+ + ++T++++D G Y Sbjct: 461 EIILLGT--------------TC--ALPSKYRNNSSILV---KNEKNDTSIMLDAGDGTY 501 Query: 66 MQVL--------REQVLSIDAVLYTHPHADHIHGIDGLRG 97 Q+L E++L I +L +H HADH G + Sbjct: 502 FQLLGIYGNKKIDEELLKIKIILISHFHADHYMGFQEVIW 541 >gi|21229158|ref|NP_635080.1| competence-like protein [Methanosarcina mazei Go1] gi|20907721|gb|AAM32752.1| Competence-like protein [Methanosarcina mazei Go1] Length = 471 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 30/128 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + T++VD G + + + ID V+ THPH+DHI G++ + Sbjct: 84 SILLEY-----NGKTMLVDAGERDKGKVVTAYLQDQGISGIDYVVATHPHSDHIGGMNEV 138 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F + F + K ++ I+ D+P + Sbjct: 139 LNSF-------------QVKHFVDSGFPHTSKTYENM-------LTTIDEKDIPFEVAEE 178 Query: 156 GGVIEAIP 163 G IE P Sbjct: 179 GKEIEFDP 186 >gi|22330184|ref|NP_175628.2| TRZ3 (TRNASE Z 3); 3'-tRNA processing endoribonuclease/ catalytic [Arabidopsis thaliana] gi|17979121|gb|AAL49818.1| unknown protein [Arabidopsis thaliana] gi|21436181|gb|AAM51378.1| unknown protein [Arabidopsis thaliana] gi|332194643|gb|AEE32764.1| tRNAse Z3 [Arabidopsis thaliana] Length = 890 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 96/342 (28%), Gaps = 101/342 (29%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D ILG G+S P R S++ I S ++++D G Sbjct: 535 RDDMEIVILGTGSSQ----------------PSKYRNVSAIFIDLFS----RGSLLLDCG 574 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----QKRPIDV 108 Q+ R E V + + +H HADH G+ + K P+ V Sbjct: 575 EGTLGQLKRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILALRSKLLKGVTHEPVIV 634 Query: 109 YAAPDCMKHLFESFRYCFKALDD--------RTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + F ++ L+D R+ + + + + G ++ Sbjct: 635 VGP-----RPLKRFLDAYQRLEDLDMEFLDCRSTTATSWASLESGGEAEGSLFTQGSPMQ 689 Query: 161 ---------------------------------AIPILQQH-----GRISSLGFRFGNV- 181 I H G + R +V Sbjct: 690 SVFKRSDISMDNSSVLLCLKNLKKVLSEIGLNDLISFPVVHCPQAYGVVIKAAERVNSVG 749 Query: 182 --------AYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKI 227 Y D P ++E ++ LI DAL +H + E++ Sbjct: 750 EQILGWKMVYSGDSRPCPE-TVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVG 808 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 N +LTH V+ + AFD M + Sbjct: 809 SAANVYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDLMSINM 850 >gi|302872286|ref|YP_003840922.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor obsidiansis OB47] gi|302575145|gb|ADL42936.1| beta-lactamase superfamily hydrolase [Caldicellulosiruptor obsidiansis OB47] Length = 238 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 76/227 (33%), Gaps = 34/227 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV----LREQVLSIDAVLYTHPHADHIHGIDG 94 +S +E ++D G + + L E+ +I+ VL TH H+DHI + Sbjct: 21 NTSAYFEFDTEL-----FLIDCGEGIFSSLYKLKLLEKYKTIN-VLITHTHSDHIATLGH 74 Query: 95 LRGYFLK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L + + + ++ + +L +I+ + I + Sbjct: 75 LLLFCFYELNKRVKIFFPEES----------LISSLLSGMGVGKYTYELIKLQNPFIYKE 124 Query: 154 SAGGVIEAIPILQQH-GRISSLGFRFGN----VAYCTDVNAFPAESLEK-LQN-LDFLII 206 + I + Q H I G+ Y D LEK L++ +DFL Sbjct: 125 I----LTIISVEQIHVNEIPCFGYLIKTKECCFFYSGDSRTLNQIILEKFLKDEIDFLYQ 180 Query: 207 DAL--KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 D + H SLSE I K+ H+ + ++ Sbjct: 181 DTCFENTTENHPHLSLSELCYLIPPEKRKHVYCIHLDRNFNFSYARN 227 >gi|170761016|ref|YP_001786764.1| ribonuclease Z [Clostridium botulinum A3 str. Loch Maree] gi|169408005|gb|ACA56416.1| ribonuclease Z [Clostridium botulinum A3 str. Loch Maree] Length = 345 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL ++ + +++D G Sbjct: 1 MDLALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGT 39 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 40 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITG 99 Query: 118 LFESFRYC 125 L Y Sbjct: 100 LRTIVPYL 107 Score = 37.4 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E + N Sbjct: 246 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAIKNKHMTFREGANLAKEANVAEL 304 Query: 236 ILTHMHVDL 244 +LTH + Sbjct: 305 MLTHFSPAM 313 >gi|227902985|ref|ZP_04020790.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796] gi|227869228|gb|EEJ76649.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus acidophilus ATCC 4796] Length = 220 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 44/213 (20%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q+L E + ID +H H DH G+ G +++ I Sbjct: 3 GQHKILMDAGLSGKKTKQLLDEVGIDINEIDMAFLSHDHTDHSGGL----GVLMRRYPKI 58 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D +A ++L ++ + P VIE G ++ Sbjct: 59 DAFANSGTWQYLLDTHK--------IGKLPAEQMNVIEPGQTK-----TFGDLDVTAFAT 105 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS- 215 H + F A+ TD +++ D +++ L++G +S Sbjct: 106 SHDAAEPQYYVFTSGGKRAAFLTDTGYVSETVEGTIEDADAYMMEFNYDTMMLRDGPYSW 165 Query: 216 ----------SHFSLSESL-KKIELINPKNAIL 237 H S ++ ++++ PK I Sbjct: 166 SLKQRILSDVGHLSNEDAAQALVDVVTPKTNIF 198 >gi|218661334|ref|ZP_03517264.1| beta-lactamase domain protein [Rhizobium etli IE4771] Length = 363 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 72/217 (33%), Gaps = 47/217 (21%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + VYA+ L + + + P V Sbjct: 80 DHYGALADLWP-----GLNVPVYASGFTAGLLEAKRNFEKARIGEVPVTPFKAGDTINVG 134 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P G + G ++ ++ TD Sbjct: 135 PFSIEGVAVNHSIPEPMSLMIRTPA----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 185 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 186 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 222 >gi|313887397|ref|ZP_07821087.1| putative ribonuclease Z [Porphyromonas asaccharolytica PR426713P-I] gi|312923165|gb|EFR33984.1| putative ribonuclease Z [Porphyromonas asaccharolytica PR426713P-I] Length = 303 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 28/190 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPH 85 C P S+ ++ ++D G ++ + ++A+ +H H Sbjct: 8 CGSARPTRHHLPSAQVLTVAGH-----HYLIDAGEGAQHSLILAGYKITQLEALFISHAH 62 Query: 86 ADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL + + +P+ + + ++ Y + + + + I Sbjct: 63 GDHCFGLPGLLTSMAHVGRTKPLTIVTTAEVADYIR----YIEEHHIEESPYELSVVIAP 118 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---------RFGNVAYCTDVNAFPAES 194 + ++ +P+ R S++GF R VA TD P + Sbjct: 119 SDEVSQAIYSDPWLQVDTLPLRH---RTSAIGFLCREHCMPRRIDPVA--TDFYQIPHTA 173 Query: 195 LEKLQ-NLDF 203 + LQ LD+ Sbjct: 174 MHALQMGLDY 183 >gi|257388099|ref|YP_003177872.1| beta-lactamase [Halomicrobium mukohataei DSM 12286] gi|257170406|gb|ACV48165.1| beta-lactamase domain protein [Halomicrobium mukohataei DSM 12286] Length = 640 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 75/231 (32%), Gaps = 57/231 (24%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D+ T LGC C R++ +S R +++D G Sbjct: 180 DWVRLTTLGC---------------CREVG------RAAFILSTPDSR-----ILIDCGD 213 Query: 63 DF-------YMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 Y+Q L SIDAV+ TH H DH L K +Y Sbjct: 214 KPGAEGEVPYLQAPEALAAGPQSIDAVVLTHAHLDHSA----LIPILFKYGYDGPIYTTA 269 Query: 113 DCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHG 169 + Y A + PP + V + I ++ G V + P ++ H Sbjct: 270 PTRDLMGLLQLDYLDVAAKEGRAPPYESQQVRDALKHTIPVE-YGNVTDIAPDIKLTMHN 328 Query: 170 RISSLG-----FRFG----NVAYCTDVN----AFPAESLEKLQNLDFLIID 207 LG F G NVA+ D++ ++ ++ L+++ Sbjct: 329 AGHILGAAVTHFHIGDGHYNVAFSGDIHYTDTRLLDGAVNDFPRVETLVLE 379 >gi|150015910|ref|YP_001308164.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902375|gb|ABR33208.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 293 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 21/195 (10%) Query: 52 SNTTVIVDTGP-DFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +N +++D+GP ++ + +D V+ THPH DHI +D + + I Sbjct: 64 NNKNLLIDSGPKSDRRKLFNYLSGLNLNKLDYVIATHPHEDHIGNMDDII-----KTYSI 118 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 + +P + +SF AL D+ + V++NN I + V P Sbjct: 119 GTFYSPKV-ESTTKSFEDMVDALKDKN----LKVHVLKNNGNSIDLGENTKVNVFSPNKD 173 Query: 167 QHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + + + ++GN ++ +A E L N + + D LK G H S S S Sbjct: 174 FYDNLNNYSPVIKIQYGNTSFLFTGDAEKEVEKEILNNNEDISADVLKVGHHGS--STST 231 Query: 223 SLKKIELINPKNAIL 237 S ++ +NP A++ Sbjct: 232 SKDFLKKVNPSIAVI 246 >gi|145590331|ref|YP_001152333.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282099|gb|ABP49681.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 635 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 17/83 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 RS++ +S + + V++D G DF M L + +DAV+ TH H DH+ Sbjct: 188 RSAILVST-----TESNVLLDCGLKPSQYDEDFPMLDL-VDIDRLDAVVLTHAHMDHVG- 240 Query: 92 IDGLRGYFLKQKRPIDVYAAPDC 114 + K VY Sbjct: 241 ---CLPFLFKYGYKGPVYMTDPT 260 >gi|81427694|ref|YP_394692.1| beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78609334|emb|CAI54380.1| Putative metal-dependent hydrolase, beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 268 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 75/240 (31%), Gaps = 54/240 (22%) Query: 38 TRSSLKISRVSERGSN-----TTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHAD 87 R S+ S S + ++VD G +Q L + +D++L TH H D Sbjct: 7 MRVSVLASSSSGNTTFIETPTQKILVDAGMSGKRVQDLMHSIGRDLKEVDSLLVTHEHRD 66 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H G+ L ++ IDVYA + P + V E Sbjct: 67 HSSGVG-----VLARRYGIDVYANQPTWDAMAS----------IIGTVPDEHKHVFEMGK 111 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDF 203 G I+ H ++ ++F + A TD + ++N D Sbjct: 112 TK-----TLGDIDVESYGVSHDAAAAQFYQFHHNNRAFAILTDTGYVSDQIRGTIENADA 166 Query: 204 LIIDA------LKNGLHS-----------SHFSLSE---SLKKIELINPKNAILTHMHVD 243 +++ L+ G + H S + +L K L H+ + Sbjct: 167 YLVECNHDLEMLRMGKYPWSLKQRILSDTGHLSNEDGASALMAFMGQQTKRVFLGHLSQE 226 >gi|328948129|ref|YP_004365466.1| ribonuclease Z [Treponema succinifaciens DSM 2489] gi|328448453|gb|AEB14169.1| Ribonuclease Z [Treponema succinifaciens DSM 2489] Length = 308 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 76/285 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG + +P R +S+ + R + + D G + + Sbjct: 7 ILGCGGMMPLP----------------YRHLTSVLLRRDGDL-----FLFDGGEGTQVSL 45 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESFR- 123 R + I+A+ +H HADH+ G+ G+ + + P+ ++ P +++ S + Sbjct: 46 RRLNLKWKKINAIFVSHTHADHVTGLPGILMLSSQVDRTEPLYIFGPPKIAEYIETSRKV 105 Query: 124 --------------------YCFKALDDRTYP----PIVNPIVIENNDVPICMKSAGGVI 159 Y R++P +E D P Sbjct: 106 LDMYINYPIVVKEITEPGVVYEGDGFYIRSFPLEHTKTCVGYTLEELDRPGEFNPEEAEK 165 Query: 160 EAIP-------ILQQHGRISSLGFRFG------------NVAYCTDVNAFPAESLEKLQN 200 IP + + ++ G ++ TD P+ + E + Sbjct: 166 LKIPKGPLWGKLQRGESVVNEDGIEIKPEQVVGKNRSGRKFSFVTDTMYLPSIAKEV-KG 224 Query: 201 LDFLII------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D LI H + ++ N L H Sbjct: 225 SDLLICEGMFADGCEDQAKEKKHMTSRQAATIARDANVLRMGLIH 269 >gi|324325728|gb|ADY20988.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 557 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQDDTELIVIHSES-----EIDFGA 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G + + D Sbjct: 132 IKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 165 >gi|322369848|ref|ZP_08044410.1| hypothetical protein ZOD2009_10175 [Haladaptatus paucihalophilus DX253] gi|320550184|gb|EFW91836.1| hypothetical protein ZOD2009_10175 [Haladaptatus paucihalophilus DX253] Length = 638 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 29/163 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGP-----DFY----MQVLREQVLSIDAVLYTHPHADHI 89 R+S +S T +++D G D + L +IDAV+ TH H DH Sbjct: 195 RASFILSTP-----ETRILIDCGDKPGSDDVPYLQVEEALGAGAATIDAVVLTHAHLDHS 249 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDV 148 L K +Y + Y A + PP + +V E Sbjct: 250 A----LIPLLFKYGYDGPIYTTEPTRDLMGLLQLDYLDVAAKEGRVPPYESEMVREALKH 305 Query: 149 PICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 I ++ G + I + H LG F G+ Y Sbjct: 306 TIPLEY--GDVTDIAPDVKLTFHNAGHILGSAVTHFHIGDGLY 346 >gi|313886306|ref|ZP_07820032.1| metallo-beta-lactamase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924251|gb|EFR35034.1| metallo-beta-lactamase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|332176857|gb|AEE12547.1| putative metallo-beta-lactamase superfamily protein [Porphyromonas asaccharolytica DSM 20707] Length = 269 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 45/236 (19%), Positives = 84/236 (35%), Gaps = 51/236 (21%) Query: 50 RGSNTTVIVDTGPDFY------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++D G Y Q + A+L TH HADH + L + Sbjct: 19 EHDGQGLLIDAGIALYDIKTGLEQAALSLEHDVQAILLTHNHADHARTVGKLA-----NR 73 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA L + R + DR Y IE +VP + + P Sbjct: 74 YGLPVYATHPVQCGL-DYMRGMERIKHDRRYA-------IEP-EVPFELIG----LVVTP 120 Query: 164 ILQQHGRISSLGFRF---GNVAYC--TDVNAFPAESLEKLQNL-DFLIIDA------LKN 211 H ++G+ ++ TD+ ++E +L L++++ L+ Sbjct: 121 FSVPHDSADNVGYHISSEDGFSFTLATDIGHLTP-TIEYYASLAHHLVLESNYDPEMLRI 179 Query: 212 GLHSS-----------HFSLSESLKKIELI-NP--KNAILTHMHVDLDYDMVLKST 253 G + H S ES++ + I P +N L H+ + ++ +++ T Sbjct: 180 GKYPPFLKKRISGPLGHLSNDESVEFLCRIWKPTMRNVFLCHLSKENNHPELVRKT 235 >gi|224373782|ref|YP_002608154.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] gi|223590014|gb|ACM93750.1| metallo-beta-lactamase family protein [Nautilia profundicola AmH] Length = 609 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 69/201 (34%), Gaps = 35/201 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKI-----SRVSERGSNTTV 56 K + FT LG G+ I G+ + N S I S +E + Sbjct: 58 KGWVRFTPLG-----GLDEIGGNCAVLETEN--------SAIIIDCGMSFPNEDMHGVDI 104 Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++ PDF LRE I ++ TH H DHI + +L ++ +Y + Sbjct: 105 LI---PDF--SYLREIRHKIKGLIITHGHEDHIGAVP-----YLFKEMQFPIYGTSLPLA 154 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISS 173 + F+ + + I+ D I M + ++ I G I Sbjct: 155 MIENKFKEHKLLQYKSYFRSVKKRHPIQIGDFKIEWIHMTHSIIDSSSLAIQTPVGTIIH 214 Query: 174 LG-FRFGNV---AYCTDVNAF 190 G F+ + Y D++ F Sbjct: 215 TGDFKIDHTPIDGYAPDLHRF 235 >gi|168180047|ref|ZP_02614711.1| ribonuclease Z [Clostridium botulinum NCTC 2916] gi|226948654|ref|YP_002803745.1| ribonuclease Z [Clostridium botulinum A2 str. Kyoto] gi|182668989|gb|EDT80965.1| ribonuclease Z [Clostridium botulinum NCTC 2916] gi|226841152|gb|ACO83818.1| ribonuclease Z [Clostridium botulinum A2 str. Kyoto] Length = 345 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 28/128 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + +P R SSL ++ + +++D G Sbjct: 1 MDLALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGT 39 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKH 117 + + L SID + TH H DH+ G+ GL R P+ + + + Sbjct: 40 QVSMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREDPLTIIGPEGIENVITG 99 Query: 118 LFESFRYC 125 L Y Sbjct: 100 LRTIVPYL 107 Score = 39.0 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 246 YVTDTRPIDP-IIDFIKNSDLFICEGTYGRDEDLHKAIKNKHMTFREGAKLANKGKVSQL 304 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 305 ILTHFSPAM 313 >gi|47197292|emb|CAF89103.1| unnamed protein product [Tetraodon nigroviridis] Length = 229 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 44/151 (29%), Gaps = 40/151 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R S+L + E + D G Sbjct: 2 TMDVTFLGTG----------------SAYPSPHRGASALVLRTEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPD 113 Q++R Q+ I V +H H DH+ G+ GL P +D+Y Sbjct: 41 TQTQLMRSQLKAGRISKVFISHLHGDHLFGLPGLLCTVSLNSNPDPQQSLSRVDIYGPRG 100 Query: 114 CMKHLFES---------FRYCFKALDDRTYP 135 L + F Y K+ P Sbjct: 101 LRHFLRVTLGLTGSQLLFPYAGKSEGQNLVP 131 >gi|68535567|ref|YP_250272.1| hypothetical protein jk0497 [Corynebacterium jeikeium K411] gi|68263166|emb|CAI36654.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length = 269 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 84/289 (29%), Gaps = 46/289 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S+ P D +S I R + + +++D GP Sbjct: 1 MELVVLGCSGSVEGP---------DSA--------ASGYIVRDTTTANPDHLLLDCGPGV 43 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVYAAPDCM 115 + R + + A V ++H HADH L ++ P + Sbjct: 44 LSAMQRAEDIDPSACHVAFSHMHADHCLDFPSL--LVWRRFHPTASSTQRHQLLGPTIAH 101 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN--DVPICMKSAGGVIEAIPILQQHGRISS 173 +HL + + DD T +N + D G H + Sbjct: 102 RHLSAAGADAPERPDDFTDTFDINAYKVGEGLFDATTYPAHPIGPFTLYAATAVHPT-EA 160 Query: 174 LGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSES 223 R + + Y D + D + +A H S ++ Sbjct: 161 YLLRVEDNAGNSLVYSGDTAWTDNLT-HIAAGADVFLCEATWGEKADGQPTGMHISGEDA 219 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + +LTH+ D D ++ ++ A GM+ S Sbjct: 220 GRAAHAAGVGKLVLTHIPPWGDADAAVRGAARHFDGEILVARPGMRLSV 268 >gi|315426611|dbj|BAJ48239.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 635 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 74/221 (33%), Gaps = 38/221 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RS + I S +TV++D G + V +DAV+ +H H DH Sbjct: 192 RSCILIQT-----SESTVMLDCGLSAGATSSLSFYPRFDAIPNLVEELDAVVLSHAHLDH 246 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENND 147 + L Y K VYA + + Y A + T+ P + Sbjct: 247 VG----LVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFAPYGESDIRLALQ 302 Query: 148 VPICMKSAGGVIEAIP----ILQQHGRI-------SSLGFRFGNVAYCTDVNAFPAESLE 196 +K G V P I G I +G N+ Y D + +L+ Sbjct: 303 HSFPLK-YGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTGDFKYERSTALD 361 Query: 197 ----KLQNLDFLIIDALKNGLHSSHFSLSESLK-KIELINP 232 K ++ LI+++ G ++L +S E I Sbjct: 362 PCVSKFPRVETLIMEST-YGATPVPYTLEQSEALLAEKITA 401 >gi|313894900|ref|ZP_07828460.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312976581|gb|EFR42036.1| metallo-beta-lactamase domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 339 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQV---LSIDAVLYTHPHADHIHGID 93 + + +E T VD Q+ + + ID ++ THPHADHI G+D Sbjct: 61 ILVQTGTENILIDTADVDERDQLRTQLAKAGIEKGGRIDKIILTHPHADHIGGMD 115 >gi|296272958|ref|YP_003655589.1| metal dependent phosphohydrolase [Arcobacter nitrofigilis DSM 7299] gi|296097132|gb|ADG93082.1| metal dependent phosphohydrolase [Arcobacter nitrofigilis DSM 7299] Length = 804 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 55/145 (37%), Gaps = 16/145 (11%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAA 111 NT ++D G L + ID + TH H DH++ I L F K+K+PI +Y Sbjct: 29 NTNSVIDAGNIVKG--LGTKAEYIDNIFLTHSHLDHLNDIPYLLDIFYEKRKKPITIYGT 86 Query: 112 PDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGG---VIEAIPILQ 166 +++L Y D + ++N + PI + + I Sbjct: 87 SKTLENLRN---YILNWEIWPDFSEIELLNKKLKAIVFKPIEIDETIILEDDTKITVIKN 143 Query: 167 QHGRISSLGFRF----GNVAYCTDV 187 H SS G+ ++ + +D Sbjct: 144 NHTN-SSCGYIITKNENSLLFSSDT 167 >gi|317405584|gb|EFV85885.1| hypothetical protein HMPREF0005_01391 [Achromobacter xylosoxidans C54] Length = 321 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 85/301 (28%), Gaps = 82/301 (27%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY----FLKQKRP 105 +VD G Y Q+ R + + AV TH H DHI + L Y + K Sbjct: 22 DGKAYLVDLGSGAYRQLRRAGIKPGAEQAVFLTHLHTDHIIDLASLLMYDPSARRRAKAS 81 Query: 106 IDVYAA----------------------------PDCMKHLFESFR-------------- 123 + +Y D + + Sbjct: 82 LQIYGPGRRGALPPLAPGLAGDPVIHAENPGAGTADLVDSVVAGMAADLNIRVRSEGVPD 141 Query: 124 -YCFKALDDRTYPPIV--NPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF- 178 F D P V +P + + IL HG + +RF Sbjct: 142 VRGFFQAHDIVVPAGVVKDPNADPAPPMEPFEVWRDERVTVSAILVPHGLVYPNFAYRFD 201 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLI---ID------------------ALKNGLH 214 G+V + D A ++ + D L+ ID AL L Sbjct: 202 TASGSVVFSGDT-ALSPNLVKLARGADILVHEAIDPAWVDHIVGPKPWDARQQALARQLL 260 Query: 215 SSHFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSR-VVPAFDGMQFSSPI 270 +H + ++ + + +L+H+ ++ + + T VV D M+ Sbjct: 261 EAHTTPQQAGEAATRAGVRKLVLSHLVPGDAPAEHWLHARETFKGPVVLGQDLMRIPLKQ 320 Query: 271 P 271 P Sbjct: 321 P 321 >gi|317487899|ref|ZP_07946491.1| metallo-beta-lactamase superfamily protein [Eggerthella sp. 1_3_56FAA] gi|316913025|gb|EFV34542.1| metallo-beta-lactamase superfamily protein [Eggerthella sp. 1_3_56FAA] Length = 267 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 84/257 (32%), Gaps = 54/257 (21%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V + + V+VD G R +++AVL TH H DH G+ + K Sbjct: 21 VEDTATGKGVLVDCGICKRDFFARCDEAGFDPANLEAVLITHDHTDHTKGLGVVLRGLAK 80 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 V+A + + + + D + AG + A Sbjct: 81 LGIEPAVFADDAVRAA----------SKEIIVLEGACDLRAFSSGD---ALSLAGMQVHA 127 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKN 211 H SS GFR V + TD E+ E L+++ L +++ LK+ Sbjct: 128 --FRTSHDAASSCGFRVEADGDAVGFMTDTGIVTGEADEALRDVRILALESNHDVQMLKD 185 Query: 212 GLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH-----VDLDYDMV--- 249 G + H S ++ ++E + + + H+ L + + Sbjct: 186 GPYPYPVKRRVGSDTGHLSNVQAADELEALLSDALEQVVAMHISQNNNTYRLPGEALTAV 245 Query: 250 --LKSTPSRVVPAFDGM 264 P+ V A+ M Sbjct: 246 VRRAGHPATVQVAYQTM 262 >gi|228984793|ref|ZP_04144965.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774991|gb|EEM23385.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 550 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + N V++D G F + L+E I ++ TH H DHI GI Sbjct: 20 QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI---- 75 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 YFLKQ + +YA + + L + IVI + + Sbjct: 76 PYFLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQDDTELIVIHSES-----EIDF 122 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+ H LG F G + + D Sbjct: 123 GAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 158 >gi|228990814|ref|ZP_04150779.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] gi|228769340|gb|EEM17938.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] Length = 557 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 74/218 (33%), Gaps = 49/218 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQENKDKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + +YA + L + + VI++ V G Sbjct: 85 LLKQLN-VPIYATKLTI-------GLIGIKLKEHGLQNLTQLFVIDSESV-----IEFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDV--------NAFPA-ESLEKLQNLDFLI 205 I H LG F G V + D N +P + K+ + L Sbjct: 132 ISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHKMAKIGSGGVLA 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A + G S S+ E +++ I + ++ Sbjct: 192 LLSESTNAERPGFTPSERSVGERIEEA-FIKARRKVIV 228 >gi|228996915|ref|ZP_04156548.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] gi|228762794|gb|EEM11708.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] Length = 557 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 74/218 (33%), Gaps = 49/218 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQENKDKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + +YA + L + + VI++ V G Sbjct: 85 LLKQLN-VPIYATKLTI-------GLIGIKLKEHGLQNLTQLFVIDSESV-----IEFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDV--------NAFPA-ESLEKLQNLDFLI 205 I H LG F G V + D N +P + K+ + L Sbjct: 132 ISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHKMAKIGSGGVLA 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A + G S S+ E +++ I + ++ Sbjct: 192 LLSESTNAERPGFTPSERSVGERIEEA-FIKARRKVIV 228 >gi|229004590|ref|ZP_04162328.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228756631|gb|EEM05938.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] Length = 557 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 74/218 (33%), Gaps = 49/218 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SNDIVVIDCGSKFPDESLLGIDLIIPDTTYLQENKDKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + +YA + L + + VI++ V G Sbjct: 85 LLKQLN-VPIYATKLTI-------GLIGIKLKEHGLQNLTQLFVIDSESV-----IEFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDV--------NAFPA-ESLEKLQNLDFLI 205 I H LG F G V + D N +P + K+ + L Sbjct: 132 ISLTFFKTNHSIPDCLGIAFYTPEGTVVHTGDFKFDLTPVNNQYPDIHKMAKIGSGGVLA 191 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + +A + G S S+ E +++ I + ++ Sbjct: 192 LLSESTNAERPGFTPSERSVGERIEEA-FIKARRKVIV 228 >gi|225561350|gb|EEH09630.1| ribonuclease Z [Ajellomyces capsulatus G186AR] Length = 1131 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 101/321 (31%), Gaps = 96/321 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 611 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 650 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ L+E + + + +H HADH G Sbjct: 651 GQLQRTFAPEELQEVLRDLKVIWISHLHADHHLGTVSVIRAWHKVTHRTQSRTAPPPEQE 710 Query: 92 ------IDGLRGYFLKQKRPID---VYAAPDCMK-----------HLFESFRYCF----- 126 ++ R + + + I+ Y++ + + +SF Y Sbjct: 711 RDLTKLLNEKRLFVVSNAKMIEWLAEYSSVEDYGFDNLLLLAADPTVPDSFHYSHLGSDG 770 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKS--AGGVIEAIPILQQHGRIS-SLGFRFG---N 180 + L D P+ + + P+ ++ A G+ + + H + S + F F Sbjct: 771 QPLLDYHGKPLTTFVSFNPDRSPLALQLQQATGLSTLLTVPVMHCQGSMATSFVFPSGLK 830 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ ++ D ++ D L++ H + E+L+ + + Sbjct: 831 VSYSGDCR--PSRDFARV-GADSTVLIHEATFEDDMLQDAQAKRHSTCGEALRVAKQMRA 887 Query: 233 KNAILTHMHVDLDYDMVLKST 253 +N ILTH + + Sbjct: 888 RNVILTHFSQRYTHKPTIPRL 908 >gi|153876813|ref|ZP_02003942.1| beta-lactamase [Beggiatoa sp. PS] gi|152066723|gb|EDN66058.1| beta-lactamase [Beggiatoa sp. PS] Length = 302 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 48/237 (20%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 L++ T I+ G Q + + + V+ TH H DHI G+ F+ Sbjct: 37 LRVDNHILVCDGGTGIIPFGNSLMAQ---QDIKEL-TVILTHYHWDHISGLPFFVPAFVP 92 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIE 160 + + +Y D + + + + D +P V + + + + + G + Sbjct: 93 GWK-VHIYGPGDGQQEIEQRIS---GQMMDPYFPVEVETWLADIHYLKANYSQLEYGPFK 148 Query: 161 AIPILQQHGRISSLGFRFGN----VAYCTD------VNAFPA------------------ 192 H S+ G+R + Y +D + Sbjct: 149 IETFNVHHPG-STFGYRIQVHDKIIVYASDNELSFIEKSIEDRKAEMNEEEWRLHKAMQA 207 Query: 193 ----ESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 +SLE ++N D I DA + H ++ K L H Sbjct: 208 EERVKSLESIRNADVFIHDAQYTPEDYAKKRGWGHSCYLDTTNFAMEAGVKQLYLFH 264 >gi|325919116|ref|ZP_08181175.1| hypothetical protein XGA_0112 [Xanthomonas gardneri ATCC 19865] gi|325550425|gb|EGD21220.1| hypothetical protein XGA_0112 [Xanthomonas gardneri ATCC 19865] Length = 249 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 12/179 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPI 106 ER + +D G + A TH H DH+ G++ + YF +++ Sbjct: 26 ERAGAPWLTIDCGSEGLTAYQAHYGRLPQAFFITHVHLDHVGGLERVFVDSYFSERRGRT 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L + + V G +E P+ Sbjct: 86 RLYVPAPVVPLLQRRIA---DYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVR- 141 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSE 222 H ++ G R G + + D P + + + D G+H SH + + Sbjct: 142 HHWPETAYGLRLKGALVWSGDTRPIPEMLARYADDGELIAHDC---GVHGNPSHTGVDD 197 >gi|291060174|gb|ADD72909.1| ribonuclease Z [Treponema pallidum subsp. pallidum str. Chicago] Length = 308 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 39/174 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 ILGCG VP R +S+ + R E + D G Sbjct: 7 ILGCG--GMVPLP--------------HRHLTSVLLRREGEL-----FLFDAGEGTQVSL 45 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESF 122 LR + I A+ +H HADHI G+ GL + R +Y P +++ S Sbjct: 46 RRLSLRWK--KISAIFISHTHADHITGLPGLLMLSSQVARSEPLYIIGPPRTAEYVETS- 102 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 R +N +I + + G + H + +G+ Sbjct: 103 --------RRILDMYINYEIIVKEVIEPQVVYRGKDFQVRCFCLDHTK-PCMGY 147 >gi|222153269|ref|YP_002562446.1| ribonuclease Z [Streptococcus uberis 0140J] gi|254808674|sp|B9DUP5|RNZ_STRU0 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|222114082|emb|CAR42499.1| ribonuclease Z [Streptococcus uberis 0140J] Length = 309 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKQRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + +++ I+++ + Sbjct: 43 QRQILETSIKPRKIQKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDIEIFGPLGIKSFV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S A+ P ++ + D+ M++ ++ A + I +G+R Sbjct: 103 QNSL-----AISGTRLPYKIHFHEFTDKDMGKIMETDKFLVYAEKLAH---TIFCMGYRV 154 >gi|148379351|ref|YP_001253892.1| ribonuclease Z [Clostridium botulinum A str. ATCC 3502] gi|153933056|ref|YP_001383727.1| ribonuclease Z [Clostridium botulinum A str. ATCC 19397] gi|153937352|ref|YP_001387276.1| ribonuclease Z [Clostridium botulinum A str. Hall] gi|148288835|emb|CAL82919.1| metallo-beta-lactamase superfamilyl protein [Clostridium botulinum A str. ATCC 3502] gi|152929100|gb|ABS34600.1| ribonuclease Z [Clostridium botulinum A str. ATCC 19397] gi|152933266|gb|ABS38765.1| ribonuclease Z [Clostridium botulinum A str. Hall] Length = 346 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 28/126 (22%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LGCG + +P R SSL ++ + +++D G + Sbjct: 4 LALLGCGGGMPIP----------------DRFLSSLLMNYRGRK-----ILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAA---PDCMKHLF 119 + L SID + TH H DH+ G+ GL R P+ + + + L Sbjct: 43 SMKILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITGLR 102 Query: 120 ESFRYC 125 Y Sbjct: 103 TIVPYL 108 Score = 39.3 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNA 235 Y TD ++ ++N D I + L + + H + E K Sbjct: 247 YVTDTRPIDP-IIDFIKNSDLFICEGTYGQDEDLHKAIKNKHMTFREGAKLANKGKVSQL 305 Query: 236 ILTHMHVDL 244 ILTH + Sbjct: 306 ILTHFSPAM 314 >gi|50122478|ref|YP_051645.1| metallo hydrolase [Pectobacterium atrosepticum SCRI1043] gi|49613004|emb|CAG76455.1| metallo hydrolase [Pectobacterium atrosepticum SCRI1043] Length = 329 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 21/129 (16%) Query: 56 VIVDTG--PDFYMQV------LRE---QVLSIDAVLYTHPHADHIHGI--DGLRGY---- 98 ++VDTG P F Q LR ID VL TH HADH G+ DG + Sbjct: 101 ILVDTGAGPLFGKQGGKLPDNLRAAGYPPEKIDTVLLTHIHADHSGGVSRDGRLVFPNAT 160 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ +D + P H+ +S ++ F +D P + + +D Sbjct: 161 VYVNQKDVDFWLNPANSHHVRDSEKHTFGQSEDSLQPAVAAKRLKTFSDKQPLFPG---- 216 Query: 159 IEAIPILQQ 167 I A+P Sbjct: 217 ITAVPAPGH 225 >gi|47217496|emb|CAG10876.1| unnamed protein product [Tetraodon nigroviridis] Length = 386 Score = 52.4 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 44/151 (29%), Gaps = 40/151 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R S+L + E + D G Sbjct: 2 TMDVTFLGTG----------------SAYPSPHRGASALVLRTEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--------IDVYAAPD 113 Q++R Q+ I V +H H DH+ G+ GL P +D+Y Sbjct: 41 TQTQLMRSQLKAGRISKVFISHLHGDHLFGLPGLLCTVSLNSNPDPQQSLSRVDIYGPRG 100 Query: 114 CMKHLFES---------FRYCFKALDDRTYP 135 L + F Y K+ P Sbjct: 101 LRHFLRVTLGLTGSQLLFPYAGKSEGQNLVP 131 >gi|332177894|gb|AEE13584.1| Ribonuclease Z [Porphyromonas asaccharolytica DSM 20707] Length = 303 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 66/190 (34%), Gaps = 28/190 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPH 85 C P S+ ++ ++D G ++ + ++A+ +H H Sbjct: 8 CGSARPTRHHLPSAQVLTVAGH-----HYLIDAGEGAQHSLILAGYKITQLEALFISHAH 62 Query: 86 ADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL + + +P+ + + ++ Y + + + + I Sbjct: 63 GDHCFGLPGLLTSMAHVGRTKPLTIVTTAEVADYIR----YIEEHHIEESPYELSVVIAP 118 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---------RFGNVAYCTDVNAFPAES 194 + ++ +P+ R S++GF R +A TD P + Sbjct: 119 SDEVSQAIYSDPWLQVDTLPLRH---RTSAIGFLCREHCMPRRIDPMA--TDFYQIPHTA 173 Query: 195 LEKLQ-NLDF 203 + LQ LD+ Sbjct: 174 MHALQMGLDY 183 >gi|148543266|ref|YP_001270636.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184152677|ref|YP_001841018.1| hydrolase [Lactobacillus reuteri JCM 1112] gi|227364329|ref|ZP_03848422.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri MM2-3] gi|325683528|ref|ZP_08163044.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|148530300|gb|ABQ82299.1| beta-lactamase domain protein [Lactobacillus reuteri DSM 20016] gi|183224021|dbj|BAG24538.1| hydrolase [Lactobacillus reuteri JCM 1112] gi|227070642|gb|EEI08972.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus reuteri MM2-3] gi|324977878|gb|EGC14829.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 268 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 35/178 (19%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +++D G + M+ + + +DA+ TH H+DH HG+ L ++ +D Sbjct: 27 NHRILIDAGLSGKRIENLMKKIDRSLKDVDAIFVTHEHSDHTHGVG-----VLARRYGMD 81 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA + + + P+ +I N V G ++ Sbjct: 82 VYANEGTWQAMADKVGKI----------PLAQKHIIAPNTVK-----DLGDMDIESFAVS 126 Query: 168 HGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++ TD ++N D +++ L+ G +S Sbjct: 127 HDAAQPQFYQVHHNNKTFCIITDTGYVSDRVTGTIRNADAYVMECNHDTEMLRMGPYS 184 >gi|24379869|ref|NP_721824.1| ribonuclease Z [Streptococcus mutans UA159] gi|290580161|ref|YP_003484553.1| hypothetical protein SmuNN2025_0635 [Streptococcus mutans NN2025] gi|41017557|sp|Q8DT90|RNZ_STRMU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|24377843|gb|AAN59130.1|AE014979_6 conserved hypothetical protein [Streptococcus mutans UA159] gi|254997060|dbj|BAH87661.1| hypothetical protein [Streptococcus mutans NN2025] Length = 309 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PAKARNVSSLVLKLLDELNEI--WMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + I + TH H DH+ G+ G R + + +D+Y Sbjct: 43 QRQILETTIKPRKIRKIFITHLHGDHVFGLPGFLSSRAFQANDEQTDVDIYGPVGIKHLV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 M + S + P ++ + + +++ ++ A + I + Sbjct: 103 MASIRTSGAHL---------PYHIHFHEFDAKHLGKILETDKFMVYAEKLDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|296450695|ref|ZP_06892448.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296879188|ref|ZP_06903183.1| conserved hypothetical protein [Clostridium difficile NAP07] gi|296260539|gb|EFH07381.1| conserved hypothetical protein [Clostridium difficile NAP08] gi|296429731|gb|EFH15583.1| conserved hypothetical protein [Clostridium difficile NAP07] Length = 385 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 32/217 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK 103 + T ++D G + +++ + V I ++ TH HADH+ G+D ++ + ++ Sbjct: 74 QDGKTFTLIDGGDNDDEKLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIEN- 132 Query: 104 RPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+ + + + F + D P+ N + + + GG Sbjct: 133 ----VFVSNGSAETKSY--RDFINALASKDLSPSVPLENNKFYLEDSYFEVLNTNGGDTT 186 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES-LEKLQNLDFLIIDALKNGLHSSHFS 219 L + + G V + D + L KL +D L K H S S Sbjct: 187 NEQSLVL---VYTNG--NDKVLFTGDAEEGTEKEILSKLDKVDLL-----KVAHHGSRSS 236 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S+ + ++ ++P+ A+L + + Sbjct: 237 SSQ--EFLDKVSPEYAVLLVGKGNSYGHPHQETMNKL 271 >gi|255655883|ref|ZP_05401292.1| hypothetical protein CdifQCD-2_09339 [Clostridium difficile QCD-23m63] Length = 369 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 32/217 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDG-LRGYFLKQK 103 + T ++D G + +++ + V I ++ TH HADH+ G+D ++ + ++ Sbjct: 58 QDGKTFTLIDGGDNDDEKLMVDYLNNQGVKDIKYLIATHSHADHLGGLDSVVKNFNIEN- 116 Query: 104 RPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 V+ + + + F + D P+ N + + + GG Sbjct: 117 ----VFVSNGSAETKSY--RDFINALASKDLSPSVPLENNKFYLEDSYFEVLNTNGGDTT 170 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES-LEKLQNLDFLIIDALKNGLHSSHFS 219 L + + G V + D + L KL +D L K H S S Sbjct: 171 NEQSLVL---VYTNG--NDKVLFTGDAEEGTEKEILSKLDKVDLL-----KVAHHGSRSS 220 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S+ + ++ ++P+ A+L + + Sbjct: 221 SSQ--EFLDKVSPEYAVLLVGKGNSYGHPHQETMNKL 255 >gi|15609544|ref|NP_216923.1| ribonuclease Z [Mycobacterium tuberculosis H37Rv] gi|148662240|ref|YP_001283763.1| ribonuclease Z [Mycobacterium tuberculosis H37Ra] gi|167966868|ref|ZP_02549145.1| ribonuclease Z [Mycobacterium tuberculosis H37Ra] gi|306776674|ref|ZP_07415011.1| hypothetical protein TMAG_02967 [Mycobacterium tuberculosis SUMu001] gi|306972786|ref|ZP_07485447.1| hypothetical protein TMJG_00676 [Mycobacterium tuberculosis SUMu010] gi|307080491|ref|ZP_07489661.1| hypothetical protein TMKG_00670 [Mycobacterium tuberculosis SUMu011] gi|307085089|ref|ZP_07494202.1| hypothetical protein TMLG_02160 [Mycobacterium tuberculosis SUMu012] gi|41017530|sp|P71736|RNZ_MYCTU RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991491|sp|A5U5A1|RNZ_MYCTA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|1655652|emb|CAB03720.1| CONSERVED HYPOTHETCAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148506392|gb|ABQ74201.1| ribonuclease Z [Mycobacterium tuberculosis H37Ra] gi|308214924|gb|EFO74323.1| hypothetical protein TMAG_02967 [Mycobacterium tuberculosis SUMu001] gi|308357799|gb|EFP46650.1| hypothetical protein TMJG_00676 [Mycobacterium tuberculosis SUMu010] gi|308361744|gb|EFP50595.1| hypothetical protein TMKG_00670 [Mycobacterium tuberculosis SUMu011] gi|308365354|gb|EFP54205.1| hypothetical protein TMLG_02160 [Mycobacterium tuberculosis SUMu012] Length = 273 Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 79/261 (30%), Gaps = 55/261 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + ++ +VD G Sbjct: 2 LEITLLGTGSPIPDP---------DRAGP-------STLVRAGAQ-----AFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF--- 119 + + AVL TH H D + I F P+ + P + + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHGDVL--ITSWVTNFAADPAPLPIIGPPGTAEVVEATL 98 Query: 120 ----ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 Y D T PP PI + G I P + ++G Sbjct: 99 KAFGHDIGYRIAHHADLTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHR-PVTPTIG 154 Query: 176 FRFG----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS------------HF 218 FR +V D P +SL++L D L+ ++ + + H Sbjct: 155 FRIESDGASVVLAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHS 212 Query: 219 SLSESLKKIELINPKNAILTH 239 S+ E+ ++TH Sbjct: 213 SVQEAAATANRAGVGTLVMTH 233 >gi|302797466|ref|XP_002980494.1| hypothetical protein SELMODRAFT_444530 [Selaginella moellendorffii] gi|300152110|gb|EFJ18754.1| hypothetical protein SELMODRAFT_444530 [Selaginella moellendorffii] Length = 303 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 74/283 (26%), Gaps = 70/283 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 LG NP RR S + + + + D Sbjct: 8 MELVFLGT-----------------AANPSPRRNSSCVLL-----KIGKIMQLFDCAEGS 45 Query: 64 FYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 F Q R +ID + TH H DH+ G+ L + ++Y L S Sbjct: 46 FRQLQESRHSGSAIDRIFITHMHGDHVWGLPALLCAAKFRVNA-EIYGPQGIRDWLRMSL 104 Query: 123 ---------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH----- 168 +Y L + + P + G I H Sbjct: 105 KSCRAKVPSKYKVHELILTQEKSLERVASLHVPANPHDDELPGNDISCSGDGVWHVLQDE 164 Query: 169 ----------GRISSLGFRFG-------------------NVAYCTDVNAFPAESLEKLQ 199 + G+ V D A + + Sbjct: 165 TLDIKAGLLTHNVPCWGYVLTEVKSEAEKESAGETTRGSRKVVILGDTANSKALTTAG-R 223 Query: 200 NLDFLIIDA-LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + D ++ +A L N +H + + + +N K +LTH++ Sbjct: 224 DADVVVHEATLGNCNKETHSTPEMAGSFAKSMNAKVLVLTHLN 266 >gi|239831701|ref|ZP_04680030.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239823968|gb|EEQ95536.1| beta-lactamase domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 585 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 66/214 (30%), Gaps = 41/214 (19%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L Sbjct: 71 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----H 120 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L P + + + + K G + Sbjct: 121 LKVPVYATPFTAGLLE-------AKRQSEDGAPDIPITIYKAGE-----KFEVGPFKIEA 168 Query: 164 ILQQHGRIS--SLGFR--FGNVAYCTDVNAFPAESLEKL-----------QNLDFLIID- 207 + H SL G V + D P SL + + LI D Sbjct: 169 VAVTHSIPEPVSLALTTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGDAGVLALICDS 228 Query: 208 --ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 AL+ G S + ESL + IE + AI T Sbjct: 229 TNALREGESPSERQVGESLRELIENARGRVAITT 262 >gi|315426553|dbj|BAJ48183.1| beta-lactamase domain protein [Candidatus Caldiarchaeum subterraneum] Length = 635 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 74/221 (33%), Gaps = 38/221 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RS + I S +TV++D G + V +DAV+ +H H DH Sbjct: 192 RSCILIQT-----SESTVMLDCGLSAGATSSLSFYPRFDAIPNLVEELDAVVLSHAHLDH 246 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENND 147 + L Y K VYA + + Y A + T+ P + Sbjct: 247 VG----LVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFAPYGESDIRLALQ 302 Query: 148 VPICMKSAGGVIEAIP----ILQQHGRI-------SSLGFRFGNVAYCTDVNAFPAESLE 196 +K G V P I G I +G N+ Y D + +L+ Sbjct: 303 HSFPLK-YGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTGDFKYERSTALD 361 Query: 197 ----KLQNLDFLIIDALKNGLHSSHFSLSESLK-KIELINP 232 K ++ LI+++ G ++L +S E I Sbjct: 362 PCVSKFPRVETLIMEST-YGATPVPYTLEQSEALLAEKITA 401 >gi|315425373|dbj|BAJ47039.1| mRNA 3'-end processing factor [Candidatus Caldiarchaeum subterraneum] Length = 638 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 74/221 (33%), Gaps = 38/221 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RS + I S +TV++D G + V +DAV+ +H H DH Sbjct: 195 RSCILIQT-----SESTVMLDCGLSAGATSSLSFYPRFDAIPNLVEELDAVVLSHAHLDH 249 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENND 147 + L Y K VYA + + Y A + T+ P + Sbjct: 250 VG----LVPYLFKYGYRGPVYAVEPTLPLMALEVTDYVSVAGKEGTFAPYGESDIRLALQ 305 Query: 148 VPICMKSAGGVIEAIP----ILQQHGRI-------SSLGFRFGNVAYCTDVNAFPAESLE 196 +K G V P I G I +G N+ Y D + +L+ Sbjct: 306 HSFPLK-YGVVTNITPDIRLIFYNAGHILGSSAVHLHIGEGLHNIVYTGDFKYERSTALD 364 Query: 197 ----KLQNLDFLIIDALKNGLHSSHFSLSESLK-KIELINP 232 K ++ LI+++ G ++L +S E I Sbjct: 365 PCVSKFPRVETLIMEST-YGATPVPYTLEQSEALLAEKITA 404 >gi|150009249|ref|YP_001303992.1| ribonuclease Z [Parabacteroides distasonis ATCC 8503] gi|298376963|ref|ZP_06986917.1| ribonuclease Z [Bacteroides sp. 3_1_19] gi|166991493|sp|A6LFA6|RNZ_PARD8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|149937673|gb|ABR44370.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|298265947|gb|EFI07606.1| ribonuclease Z [Bacteroides sp. 3_1_19] Length = 304 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 99/317 (31%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPH 85 C P R +S + + ++D G +Q+ +R + ++ + +H H Sbjct: 11 CGSALPTTRHLATSQIVDL-----RDKLYMIDCGEGTQVQMRRMRIKFSRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRG----------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DH G+ GL + + I+ Y P + + Y Sbjct: 66 GDHCFGLPGLISTLGMLGRNGELVIHGPKEIESYMRP-VLDIFCKGLPY----------- 113 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----------------- 178 + +I+ + M+ + +IP+ RI G+ F Sbjct: 114 -EIRFNLIDPTTHSLVMEDRSLSVYSIPLKH---RIPCCGYLFAEKAKEAHIIREMTDFY 169 Query: 179 ------------------------------------GNVAYCTDVNAFPAESLEKLQNLD 202 AYC+D AF + ++ +D Sbjct: 170 QVPVRMMQEIKRGADFVTPEGEVIPNARLTRPAVAPKRYAYCSDT-AFHPSIIPIIEGVD 228 Query: 203 FLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L DA + + H + ++ + K ++ H + LK Sbjct: 229 LLYHEATFAECDAARAKE-TFHSTARQAAEIAYKAQVKRLVIGHYSARYEDMAPLKKEAD 287 Query: 256 RVVPAF----DGMQFSS 268 ++ P +GM+ S Sbjct: 288 KIFPGTILGEEGMRLSV 304 >gi|312891514|ref|ZP_07751028.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] gi|311295977|gb|EFQ73132.1| beta-lactamase domain protein [Mucilaginibacter paludis DSM 18603] Length = 276 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 84/227 (37%), Gaps = 44/227 (19%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++VD G + MQ L + ++ AV +H H+DHI G+ L +K + Sbjct: 24 EQDAILVDAGISCRETEKRMQRLGLSMHNVRAVFISHEHSDHIRGLP-----VLAKKYQL 78 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY P ++ Y ALD+ P + D+ + Sbjct: 79 PVYITPRTLQ-------YGGLALDENLVIPFRGYEPVRVGDLLVTAFPKLHD-----ASD 126 Query: 167 QHGRISSLGFRFGNVAYCTD--------VNAFPAESLEKLQ-NLDFLIIDALKNGLH--- 214 H I S +R V TD ++ F L+ N D +++ + H Sbjct: 127 PHSFIIS--YRDVKVGVFTDIGSPCDNLISHFAQCHAAFLEANYDEAMLEQGRYPYHLKR 184 Query: 215 -----SSHFSLSESLKKIELINP---KNAILTHMHVDLDYDMVLKST 253 + H S S++L+ ++ P + +L+H+ D + +++ Sbjct: 185 RIRGGNGHLSNSQALEVFKVHRPSFMSHLLLSHLSKDNNCPQLVQDL 231 >gi|6850339|gb|AAF29402.1|AC022354_1 unknown protein [Arabidopsis thaliana] Length = 837 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 96/342 (28%), Gaps = 101/342 (29%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D ILG G+S P R S++ I S ++++D G Sbjct: 482 RDDMEIVILGTGSSQ----------------PSKYRNVSAIFIDLFS----RGSLLLDCG 521 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----QKRPIDV 108 Q+ R E V + + +H HADH G+ + K P+ V Sbjct: 522 EGTLGQLKRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILALRSKLLKGVTHEPVIV 581 Query: 109 YAAPDCMKHLFESFRYCFKALDD--------RTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + F ++ L+D R+ + + + + G ++ Sbjct: 582 VGP-----RPLKRFLDAYQRLEDLDMEFLDCRSTTATSWASLESGGEAEGSLFTQGSPMQ 636 Query: 161 ---------------------------------AIPILQQH-----GRISSLGFRFGNV- 181 I H G + R +V Sbjct: 637 SVFKRSDISMDNSSVLLCLKNLKKVLSEIGLNDLISFPVVHCPQAYGVVIKAAERVNSVG 696 Query: 182 --------AYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGLH-SSHFSLSESLKKI 227 Y D P ++E ++ LI DAL +H + E++ Sbjct: 697 EQILGWKMVYSGDSRPCPE-TVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVG 755 Query: 228 ELINPKNAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 N +LTH V+ + AFD M + Sbjct: 756 SAANVYRIVLTHFSQRYPKIPVIDESHMHNTCIAFDLMSINM 797 >gi|312127068|ref|YP_003991942.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] gi|311777087|gb|ADQ06573.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor hydrothermalis 108] Length = 822 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 64/220 (29%), Gaps = 64/220 (29%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGID 93 S + I N +++D+G Q+LRE + +D L +H H DHI + Sbjct: 15 SCVLIKAC-----NKNILIDSGIRMKEDKLPNLQLLRE-LGGVDVCLISHAHLDHIGSLP 68 Query: 94 ----GLRGYFLKQKRP----------------------IDVYAAPDCMKHLFESFRYCFK 127 F +P I +YA + L + Y F Sbjct: 69 LIAREYPQIFFYANQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFN 128 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + IE V I I Q G I Y D Sbjct: 129 YTFE----------PIEGIKVTFFSAGHILGASMIFIQTQEGSIL----------YTGDF 168 Query: 188 N-----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 + S+ K++ D +I ++ ++ S E Sbjct: 169 SADKQLTVDKASVPKIR-PDIVICESTYGDRLHTNRSFEE 207 >gi|311741211|ref|ZP_07715035.1| metal-dependent hydrolase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303381|gb|EFQ79460.1| metal-dependent hydrolase [Corynebacterium pseudogenitalium ATCC 33035] Length = 253 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 49/282 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP NP S +S + ++++D GP Sbjct: 1 MKLTILGC--SGSVP---------TAQNPA-----SGYLLSF----DNAPSIVLDMGPGT 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHLF 119 Q+ ++Q V ++H HADH L + + HL Sbjct: 41 LAQLEQQQDPCDAHVAFSHLHADHCLDFPSLMVWRRFHPTAPAASRNMCFGPKATPTHLG 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +DD + + + + + P H + + R Sbjct: 101 RLSSDEVDGIDDMS-----DTFAFSAWEP--GERQLVDDVYITPFPVNH-PVEAYALRVE 152 Query: 180 N------VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIE 228 + + Y D +++ +E + D + +A + H S +E+ + Sbjct: 153 HTKTGHTITYSGD-SSYTPALVEAARGADIFLCEAAWGETSEGKAPDMHMSGAEAGRAAR 211 Query: 229 LINPKNAILTHMHVDLDY----DMVLKSTPSRVVPAFDGMQF 266 +L H+ D + +V GM+F Sbjct: 212 EAGVSKLVLIHIQPWGDAQATLEAARSEFAGEIVLGAAGMEF 253 >gi|196039032|ref|ZP_03106339.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus NVH0597-99] gi|196030177|gb|EDX68777.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus NVH0597-99] Length = 557 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFRTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|126740397|ref|ZP_01756085.1| metallo-beta-lactamase family protein [Roseobacter sp. SK209-2-6] gi|126718533|gb|EBA15247.1| metallo-beta-lactamase family protein [Roseobacter sp. SK209-2-6] Length = 556 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 49/215 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + ++G ++VD G F LRE+ ++A+L TH H D Sbjct: 22 AYVYGYGKQGQERLILVDLGVAFPDMDGTPGVDLIMPDITWLRERADQLEAILITHGHED 81 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI + L G + + VYA ++R + P + + Sbjct: 82 HIGAVAHLYG-----QLNVPVYARAFTANLARRKM-------EERGHDP-MQVHTVGAWP 128 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 + G H S G G V + D F E Sbjct: 129 E----VTKLGPFTVGVAPMAHSIPESGGLVIDSPAGRVVHTGDFKLDRDPLVGEPFDPEM 184 Query: 195 LEKLQ--NLDFLIIDALK---NGLHSSHFSLSESL 224 ++ + L+ D+ S L E + Sbjct: 185 WTEIAKPGVKALVCDSTNVFSQHPGRSESDLPEEI 219 >gi|291517971|emb|CBK73192.1| RNAse Z [Butyrivibrio fibrisolvens 16/4] Length = 303 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 70/279 (25%), Gaps = 94/279 (33%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGI 92 NR +S E ++VD G + + I + TH HADH+ G+ Sbjct: 17 NRWL-TSCLFRFNGEG-----LLVDCGEGTQVALREAGFSPNPISIICLTHYHADHVSGL 70 Query: 93 DGLRGYFLKQKR-----PIDVYAA---PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 G+ L PI + + L + P + I Sbjct: 71 P---GFLLSMGNSDRTEPITIIGPKGLERVVNSLR---------VIAPELPFEIKFHEIT 118 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------------- 179 D I + H + G+ Sbjct: 119 EADEYIELLGY----HIHAFKVNH-NVLCYGYTIDIPRKGRFDVDAAKALGLPVQLWNPL 173 Query: 180 --------------------------NVAYCTDVNAFPAESL-EKLQNLDFLII------ 206 V YCTD P +SL E + D LI Sbjct: 174 QKGQTVEYEGNTFTPDMVMGDARRGIRVTYCTDTR--PTKSLVEASKEADLLICEGMYAE 231 Query: 207 -DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 D L + H + E+ K + K LTH L Sbjct: 232 EDKLVKAKQNKHMTFYEAAKVAKDAEVKELWLTHFSPSL 270 >gi|255324314|ref|ZP_05365435.1| metal-dependent hydrolase of the beta-lactamase family protein III [Corynebacterium tuberculostearicum SK141] gi|255298644|gb|EET77940.1| metal-dependent hydrolase of the beta-lactamase family protein III [Corynebacterium tuberculostearicum SK141] Length = 253 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 49/282 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP NP S +S + ++++D GP Sbjct: 1 MKLTILGC--SGSVP---------TAQNPA-----SGYLLSF----DNAPSIVLDMGPGT 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-----KRPIDVYAAPDCMKHLF 119 Q+ ++Q V ++H HADH L + + HL Sbjct: 41 LAQLEQQQDPCDAHVAFSHLHADHCLDFPSLMVWRRFHPTAPAASRNMCFGPKATPTHLG 100 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 +DD + + + + + P H + + R Sbjct: 101 RLSSDEVDGIDDMS-----DTFAFSAWEP--GERQLVDDVYITPFPVNH-PVEAYALRVE 152 Query: 180 N------VAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSSHFSLSESLKKIE 228 + + Y D +++ +E + D + +A + H S +E+ + Sbjct: 153 HTKTGHTITYSGD-SSYTPALVEAARGADIFLCEAAWGETSEGKAPDMHMSGAEAGRAAR 211 Query: 229 LINPKNAILTHMHVDLDY----DMVLKSTPSRVVPAFDGMQF 266 +L H+ D + +V GM+F Sbjct: 212 EAGVSKLVLIHIQPWGDAQATLEAARSEFDGEIVLGAAGMEF 253 >gi|206970858|ref|ZP_03231810.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH1134] gi|206734494|gb|EDZ51664.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH1134] Length = 557 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 85 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSKSEI 127 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 128 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 165 >gi|329769181|ref|ZP_08260601.1| hypothetical protein HMPREF0433_00365 [Gemella sanguinis M325] gi|328839400|gb|EGF88978.1| hypothetical protein HMPREF0433_00365 [Gemella sanguinis M325] Length = 179 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 34/180 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + + + + + D G Sbjct: 1 MEVQFLGTGA--GLPA---------------KFRNTQSFVFDFMQE-LKECWMFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP-IDVYAAPDCMKHL 118 Q+L+ + I + +H HADH+ G+ G R + L +K + +Y + + Sbjct: 43 QHQILKTNIKPTKIKRIFISHLHADHVLGLIGFLSSRSFLLDKKESEVIIYGPKGIKEFI 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 ++ ++ F +L IE ++ + S + A P+ I G++ Sbjct: 103 EQNLKFTFCSLTYS-------IKYIEISEEACIIDSKTVGVYAYPLRHN---IDCFGYKI 152 >gi|291551088|emb|CBL27350.1| RNAse Z [Ruminococcus torques L2-14] Length = 302 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 90/278 (32%), Gaps = 56/278 (20%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYF 99 ++ + R + +++++D G + V + ID + +TH H DHI G+ GL Sbjct: 20 LTSLMTRFNGSSLMIDCGEGTQVAVKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTMGN 79 Query: 100 LKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 ++ P+ + + L F ++ + +N ++ V Sbjct: 80 ADRREPLTLIGPKGLERVVSCLRVIAPELPFPIIYQEIQGAEQTFELNGYRLKAFRVNHN 139 Query: 152 MKSAGGVIEA---------------IP------------ILQQHGRIS---SLG-FRFG- 179 + G IE IP + + G ++ LG R G Sbjct: 140 VLCYGYTIEIDRAGKFDVERARANEIPQKYWSRLQNGETVESEMGILTPDMVLGPQRKGI 199 Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIELINP 232 + Y TD E +++ D I + + H + E+ + + N Sbjct: 200 KLTYTTDTRP-TDSIRENVKDSDLFICEGMYGEKEKAAKAVEYKHMTFYEAAELAKEANV 258 Query: 233 KNAILTHMHVDL----DYDMVLKSTPSRVVPAFDGMQF 266 LTH L Y +K R DGM Sbjct: 259 GEMWLTHYSPSLTKPEHYMNDVKKIFPRAKAGKDGMSV 296 >gi|225868312|ref|YP_002744260.1| ribonuclease Z [Streptococcus equi subsp. zooepidemicus] gi|259494139|sp|C0MDJ9|RNZ_STRS7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|225701588|emb|CAW98830.1| ribonuclease Z [Streptococcus equi subsp. zooepidemicus] Length = 309 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKHRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + +++ +++Y ++ Sbjct: 43 QRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLEIYGPVGIKSYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + P ++ ++ + +++ ++ A H I +G+R Sbjct: 103 TNSIR-----ISGSKLPYQIHYHEFDDTSMGKILETDKFIVYAE--RLAH-TIFCMGYRV 154 >gi|225870753|ref|YP_002746700.1| ribonuclease Z [Streptococcus equi subsp. equi 4047] gi|254808666|sp|C0MAM9|RNZ_STRE4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|225700157|emb|CAW94300.1| ribonuclease Z [Streptococcus equi subsp. equi 4047] Length = 309 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKHRNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + I + TH H DHI G+ G R + +++ +++Y ++ Sbjct: 43 QRQILETTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLEIYGPVGIKSYV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + P ++ ++ + +++ ++ A H I +G+R Sbjct: 103 TNSIR-----ISGSKLPYQIHYHEFDDTSMGKILETDKFIVYAE--RLAH-TIFCMGYRV 154 >gi|301053248|ref|YP_003791459.1| Zn-dependent hydrolase [Bacillus anthracis CI] gi|300375417|gb|ADK04321.1| Zn-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 557 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|291514122|emb|CBK63332.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Alistipes shahii WAL 8301] Length = 424 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 48/161 (29%), Gaps = 26/161 (16%) Query: 45 SRVSERGSNTTVIVDTGP----DFYMQVLREQVLS--------IDAVLYTHPHADHIHGI 92 S V R +++D G D Q +EQ+ DA+ +H HADH + Sbjct: 15 SCVEIRTPQAKILLDLGLPLDFDSRSQEQQEQIRREALEWAQEADAIFISHYHADHHGLL 74 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 R + +YA + + D Y +N + E +D Sbjct: 75 PD-------THRDVAIYATAGTAAMMHVT--EVIHGRGDADYLHHINVLSKEADDRKFE- 124 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNA 189 I P H + F + Y D+ Sbjct: 125 PIIVDDIRITPYTVDHAAYDACAFLIEAEGRRILYSGDIRR 165 >gi|217959189|ref|YP_002337737.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH187] gi|217062946|gb|ACJ77196.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH187] Length = 557 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|162448647|ref|YP_001611014.1| metallo-beta-lactamase family protein [Sorangium cellulosum 'So ce 56'] gi|161159229|emb|CAN90534.1| hypothetical metallo-beta-lactamase family protein [Sorangium cellulosum 'So ce 56'] Length = 613 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 29/141 (20%) Query: 56 VIVDTGPDFYMQVLREQV------------LSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++D G F L V + ++ TH H DHI G+ FL + Sbjct: 96 LLIDCGVTFPSTDLGVDVYHPRFDHVLALRDQVRGIVLTHGHEDHIGGLP-----FLLRH 150 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + V+ P ++ + R P + + A G P Sbjct: 151 LDVPVWGPPHALELVRYRLAEHALEDKVRLLP------------TQVGREVAIGGFVVEP 198 Query: 164 ILQQHGRISSLGFRFGNVAYC 184 + H + + A Sbjct: 199 LRVTHSIVDATALAIHTAAGL 219 >gi|47566090|ref|ZP_00237128.1| Zn-dependent hydrolase [Bacillus cereus G9241] gi|47557007|gb|EAL15337.1| Zn-dependent hydrolase [Bacillus cereus G9241] Length = 550 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + N V++D G F + L+E I ++ TH H DHI GI Sbjct: 20 QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI---- 75 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 YFLKQ + +YA + + L + IVI + + Sbjct: 76 PYFLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQDDTELIVIHSES-----EIDF 122 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+ H LG F G + + D Sbjct: 123 GAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 158 >gi|293400282|ref|ZP_06644428.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306682|gb|EFE47925.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 229 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 43/165 (26%) Query: 50 RGSNTTVIVDTGPD---FYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++T +++D G R Q + DA+L TH H DH+ +K + Sbjct: 18 KHNDTKLVIDCGSTRKYLKACFERLQYDHLSSDAILITHTHTDHVS--------QMKMFQ 69 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ID YA D + I + + Sbjct: 70 SIDTYATQDIATD---------------------HLHAIRPFE-----SFDIKDFHITVL 103 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI 205 H ++G+ + Y TD E + +++ D+ + Sbjct: 104 PMSHDCEGTVGYVIECENEKMVYVTDTGYIKKEVKDYIRDADYYV 148 >gi|212224939|ref|YP_002308175.1| Hypothetical hydrolase [Thermococcus onnurineus NA1] gi|212009896|gb|ACJ17278.1| Hypothetical hydrolase [Thermococcus onnurineus NA1] Length = 281 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 32/211 (15%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP ++ R ++ +DAV +H H DH +V Sbjct: 42 RNIYVDPGPGALVRSWRYKLDPRKLDAVFVSHRHVDHC--------------NDTEVMIE 87 Query: 112 PDCMKHLFESFRYC----FKALDDRTYPPIVNPI--VIENNDVPIC-MKSAGGVIEAIPI 164 L + D+ P + V+E+ P K + G E I Sbjct: 88 AMTGGALKKRGMLIASKSVVYGDETHTPAVSKYHMDVLESIHTPEPGNKISVGEEELIIT 147 Query: 165 LQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHF 218 +H +++GF R+G+++Y D F E +E + +I + H Sbjct: 148 PTRHSDPTTIGFRMRTRYGDISYIPDTAYF-DELIEWHEGSRLIIAAVTRPRDMGIPYHL 206 Query: 219 SLSESLKKIELI--NPKNAILTHMHVDLDYD 247 S + + ++ + P+ I++H+ + + + Sbjct: 207 STDDVVTMLKKMEGKPEVFIMSHIGMKMHFA 237 >gi|13541268|ref|NP_110956.1| RNA processing exonuclease [Thermoplasma volcanium GSS1] gi|14324652|dbj|BAB59579.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 407 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 51 GSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 NT+VIVD G PD +DA+ TH H DHI I + + P D+ Sbjct: 21 DRNTSVIVDYGVIPD-KPPQYPMPPEPVDAMFITHSHLDHIGAI----PVYYHKGEP-DL 74 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPI-----VNPIVIENNDVPICMKSAGGVIEAIP 163 YA + + K + YP + +N + G + P Sbjct: 75 YATQMTLNCMKPLLNDSLKVTNLEGYPAMFNEDDINTALANMKPARYFESFDVGDFKVTP 134 Query: 164 ILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLEKLQNL--DFLIID 207 H S++ ++F + + DVN + + + D LII+ Sbjct: 135 YPAGHIPGSAM-WKFEDGKSITVTGDVNTIDTYLINGAKPIKTDVLIIE 182 >gi|315444911|ref|YP_004077790.1| hydrolase of the metallo-beta-lactamase superfamily [Mycobacterium sp. Spyr1] gi|315263214|gb|ADT99955.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Mycobacterium sp. Spyr1] Length = 558 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD +++++ ++A++ TH H DHI I + LKQ+ I + + + + E Sbjct: 62 PDLRH--VQDRLDDVEAIVVTHAHEDHIGAI----PFVLKQRADIPIVGSKFTLALIAE- 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P +V +V KS GV E H L Sbjct: 115 -----KCREHRLSPKLV--------EVTEGTKSTHGVFECQYFAVNHSVPGCLA 155 >gi|302872375|ref|YP_003841011.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] gi|302575234|gb|ADL43025.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor obsidiansis OB47] Length = 821 Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 68/219 (31%), Gaps = 67/219 (30%) Query: 45 SRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLR-- 96 S V + +++D+G QVLRE + +D L +H H DHI + + Sbjct: 15 SCVLIKAGGKNILIDSGIRMKEDKLPNLQVLRE-LGGVDVCLISHAHLDHIGSLPLIARE 73 Query: 97 ---GYFLKQK---------------------RPIDVYAAPDCMKHLFES----FRYCFKA 128 +F + I +YA + L + F Y F+ Sbjct: 74 YPHIFFYTNQPTKDLIKVLLYDSLRIMEIAEDEIPIYAEKNVEDLLDRTLTYGFNYTFEP 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ ++ + + I + G++ Y D + Sbjct: 134 VEGIRVTFFPAGHILGASMIFIQTQE------------------------GSILYTGDFS 169 Query: 189 -----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S+ K++ D +I ++ ++ S E Sbjct: 170 ADKQLTVDKASVPKIR-PDIVICESTYGDRLHTNRSFEE 207 >gi|229155281|ref|ZP_04283392.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|228628206|gb|EEK84922.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] Length = 550 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 52/156 (33%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + N V++D G F + L+E I ++ TH H DHI GI Sbjct: 20 QSENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI---- 75 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 YFLKQ + +YA + + L + IVI + + Sbjct: 76 PYFLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQDDTELIVIHSES-----EIDF 122 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+ H LG F G + + D Sbjct: 123 GAIKTTFFKTNHSIPDCLGIVFHTPEGTIVHTGDFK 158 >gi|172057024|ref|YP_001813484.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171989545|gb|ACB60467.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 328 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 15/96 (15%) Query: 44 ISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSI-------DAVLYTHPHADHIHGIDG 94 I+ R + +++D GPD Q +++ + I D V+ TH HADH G+ Sbjct: 21 INCYVLRTDSENILIDCGPDTEQAWQAMQDGLQKIGLTVSMLDKVIVTHHHADH-AGL-- 77 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + ++ I +Y +L + + + D Sbjct: 78 ---AYRFSEQGIPIYGHARLRPYLEQDQAFLSRGDD 110 >gi|229149913|ref|ZP_04278141.1| Zn-dependent hydrolase [Bacillus cereus m1550] gi|228633594|gb|EEK90195.1| Zn-dependent hydrolase [Bacillus cereus m1550] Length = 564 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|218781907|ref|YP_002433225.1| cyclic nucleotide-binding protein [Desulfatibacillum alkenivorans AK-01] gi|218763291|gb|ACL05757.1| cyclic nucleotide-binding protein [Desulfatibacillum alkenivorans AK-01] Length = 884 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 13/124 (10%) Query: 57 IVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +VD P + L + ++ + +TH H DH G+ L + R + +A P Sbjct: 409 LVDAPPSVMNGLTALGIDISEVEGIFHTHSHDDHFAGLPDL----VHTDRRLKYFATPLV 464 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + F +L + + + +E + G +E P+ H ++L Sbjct: 465 RTAVAKKFA-ALTSLPEEKFEQFFDIHDLE-----FDTWNKIGGLEVKPLYSPHPVENNL 518 Query: 175 GFRF 178 F F Sbjct: 519 -FLF 521 >gi|52143749|ref|YP_083079.1| Zn-dependent hydrolase [Bacillus cereus E33L] gi|51977218|gb|AAU18768.1| Zn-dependent hydrolase [Bacillus cereus E33L] Length = 557 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|218896644|ref|YP_002445055.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus G9842] gi|218545535|gb|ACK97929.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus G9842] Length = 557 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 85 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 127 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 128 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 165 >gi|121700737|ref|XP_001268633.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus clavatus NRRL 1] gi|119396776|gb|EAW07207.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus clavatus NRRL 1] Length = 1080 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 101/314 (32%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS ++ ++D G + Sbjct: 580 EIVTLGTGSSS----------------PSKYRNVSSTLVNVPG----VGYYLLDCGENTL 619 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + ++ + +H HADH G Sbjct: 620 GQLKRMYDPKKLREVLQNLRMIWISHLHADHHLGTASVIKAWFRENYPEGVPRTTTIETD 679 Query: 92 ----IDGLRGYF------------------LKQKRPIDVYA-APDCMKHLFESFRYCFKA 128 + R + + + + A + + Y Sbjct: 680 MSKILTDKRLFVISEEMMVGWLEEYAGVEDYGFGKLVPLVAFPNYANGSIRTTLSYRH-T 738 Query: 129 LDDRTYP--------PIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGRIS-SLGFR 177 DD +YP P + + + + P+ ++ A G+ + + H R + ++ Sbjct: 739 RDDGSYPGYEQDGSRPQITTLDFHDKNSPLTPLLQRATGLTDILTTRVPHCRGAMAVSLI 798 Query: 178 FGN---VAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLSESLKKI 227 F + V++ D P+ S + ++ LI +A + + H + SE+L+ Sbjct: 799 FPDSFKVSFSGDCR--PSNSFAAIGRDSTVLIHEATFQDDMAMSAVLKKHSTTSEALEVG 856 Query: 228 ELINPKNAILTHMH 241 L++ + +LTH Sbjct: 857 RLMDARTVVLTHFS 870 >gi|145224580|ref|YP_001135258.1| beta-lactamase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145217066|gb|ABP46470.1| beta-lactamase domain protein [Mycobacterium gilvum PYR-GCK] Length = 558 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD +++++ ++A++ TH H DHI I + LKQ+ I + + + + E Sbjct: 62 PDLRH--VQDRLDDVEAIVVTHAHEDHIGAI----PFVLKQRADIPIVGSKFTLALIAE- 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P +V +V KS GV E H L Sbjct: 115 -----KCREHRLSPKLV--------EVTEGTKSTHGVFECQYFAVNHSVPGCLA 155 >gi|134299670|ref|YP_001113166.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052370|gb|ABO50341.1| RNase J1 [Desulfotomaculum reducens MI-1] Length = 559 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 48/138 (34%), Gaps = 19/138 (13%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R +++D G F + L + I AVL TH H DHI G+ Sbjct: 26 RYGEHIILIDCGLAFPEEEMMGIDIVLPDYTYLLDNKEKILAVLLTHGHEDHIGGL---- 81 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 YFLKQ + VY + + L + + PI+ +IE + Sbjct: 82 PYFLKQIN-VPVYGSRLAL-GLVDRKLKEHRIERQSDLRPIIPRDMIEIGPFTVEFIRVS 139 Query: 157 GVIEAIPILQQHGRISSL 174 I L H + +L Sbjct: 140 HSIPDAMALAIHSPVGTL 157 >gi|262282623|ref|ZP_06060391.1| metallo-beta-lactamase [Streptococcus sp. 2_1_36FAA] gi|262261914|gb|EEY80612.1| metallo-beta-lactamase [Streptococcus sp. 2_1_36FAA] Length = 553 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ L + F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAETKVPVFGSELTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ + VI+ N + G + H SLG GN+ Y Sbjct: 104 KNNDVVKKFNDFHVIDEN-----TEIEFGNVVVSFFRTTHSIPESLGIVIKTDEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|157150494|ref|YP_001450093.1| metallo-beta-lactamase family protein [Streptococcus gordonii str. Challis substr. CH1] gi|157075288|gb|ABV09971.1| metallo-beta-lactamase family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 553 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ L + F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAETKVPVFGSELTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ + VI+ N + G + H SLG GN+ Y Sbjct: 104 KNNDVVKKFNDFHVIDEN-----TEIEFGNVVVSFFRTTHSIPESLGIVIKTDEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|307823065|ref|ZP_07653295.1| beta-lactamase-like protein [Methylobacter tundripaludum SV96] gi|307735840|gb|EFO06687.1| beta-lactamase-like protein [Methylobacter tundripaludum SV96] Length = 293 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 7/133 (5%) Query: 51 GSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 N +I+D G + Q L +++ + TH H DHI G+ F+ I + Sbjct: 34 DDNDLIILDAGTGIHALAQNLLKEMPVQAHIFITHTHWDHIQGLPFFIPIFIPN-NHIKI 92 Query: 109 YA--APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y P + + + + +N IE V + G PI+ Sbjct: 93 YGGIDPVTNETINRALSVQLQYSFFPIREAQLNAR-IEYATVKPGVPVHVGRAVITPIVL 151 Query: 167 QHGRISSLGFRFG 179 H ++ G+R Sbjct: 152 SHPVLN-FGYRID 163 >gi|260550918|ref|ZP_05825124.1| ribonuclease Z [Acinetobacter sp. RUH2624] gi|260406045|gb|EEW99531.1| ribonuclease Z [Acinetobacter sp. RUH2624] Length = 318 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKDWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLSLQNLVAICITHVHGDHCYGL 72 >gi|313127082|ref|YP_004037352.1| universal archaeal kh-domain/beta-lactamase-domain protein [Halogeometricum borinquense DSM 11551] gi|312293447|gb|ADQ67907.1| universal archaeal KH-domain/beta-lactamase-domain protein [Halogeometricum borinquense DSM 11551] Length = 640 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 55/163 (33%), Gaps = 29/163 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF------YMQ---VLREQVLSIDAVLYTHPHADHI 89 R+S +S T +++D G Y+Q L S+DAV+ TH H DH Sbjct: 195 RASFILSTP-----ETRILIDCGDKPGSDDVPYLQVPEALGSGANSLDAVILTHAHLDHS 249 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDV 148 L K +Y + + Y A + PP + +V E + Sbjct: 250 A----LIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDVAAKEGRTPPYESEMVREA--I 303 Query: 149 PICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 C+ G + I + H LG F G+ Y Sbjct: 304 KHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLY 346 >gi|315613460|ref|ZP_07888368.1| ribonuclease Z [Streptococcus sanguinis ATCC 49296] gi|315314456|gb|EFU62500.1| ribonuclease Z [Streptococcus sanguinis ATCC 49296] Length = 309 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + I + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKISKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|288556353|ref|YP_003428288.1| Zn-dependent hydrolase [Bacillus pseudofirmus OF4] gi|288547513|gb|ADC51396.1| Zn-dependent hydrolase [Bacillus pseudofirmus OF4] Length = 557 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V+VD G F Q L E + A++ TH H DHI GI +FLK Sbjct: 33 VVVDCGNKFPDETLLGIDLIIPDIQYLIENQERVKALIVTHGHEDHIGGI----PFFLK- 87 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K + VYA + + K + + ++ ++ + I+ Sbjct: 88 KLNVPVYATRFTLGLIE------LKLTEHKILRETELIEILADSVITFE------EIKIE 135 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H LG F G + + D Sbjct: 136 FFKVNHSIPDCLGIVFRTPEGTIVHTGDFK 165 >gi|221632824|ref|YP_002522046.1| metallo-beta-lactamase superfamily protein [Thermomicrobium roseum DSM 5159] gi|221156540|gb|ACM05667.1| metallo-beta-lactamase superfamily protein [Thermomicrobium roseum DSM 5159] Length = 265 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 67/220 (30%), Gaps = 53/220 (24%) Query: 50 RGSNTTVIVDTG--PDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R T++++D G ++LR + A++ TH H DH+ G+ G Q Sbjct: 18 RTQRTSILIDAGLAATTLRRLLRSIGVGDHELTAIVVTHEHHDHVRGL---AGLLRWQSC 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ + ++ V G + P+ Sbjct: 75 PV----------------------VTTVGTDAVLRLGSARRLTVRYQHWLEIGDLALYPV 112 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H G R A TD+ E L L + ++++A L G + Sbjct: 113 PVPHDAREPFGLRLATCHAETALFTDLGTVTDEVLVALSRANLIVLEANHDRDLLWRGPY 172 Query: 215 S-----------SHFSLSESLKKIELI--NPKNAILTHMH 241 H S ++ + + +P+ L H+ Sbjct: 173 PDWLKRRIASPAGHLSNDQAAYALAHLSGSPRTIWLAHLS 212 >gi|326794901|ref|YP_004312721.1| beta-lactamase [Marinomonas mediterranea MMB-1] gi|326545665|gb|ADZ90885.1| beta-lactamase domain protein [Marinomonas mediterranea MMB-1] Length = 365 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGL 95 +++ + ++ G +++D G + + ++DAVL +H H DHI G+ L Sbjct: 16 PAAIYVQTTNKSGQTVRLLLDAGGSL-EGLPDKGWNIPDNLDAVLISHDHQDHIGGLPDL 74 Query: 96 RGYFLKQKRPIDVYAAPDCMKHL 118 + I VYA P +L Sbjct: 75 -------DKQIPVYATPQVQPYL 90 >gi|304382117|ref|ZP_07364628.1| ribonuclease Z [Prevotella marshii DSM 16973] gi|304336715|gb|EFM02940.1| ribonuclease Z [Prevotella marshii DSM 16973] Length = 304 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGCG++L P + +S + ++D G Sbjct: 4 FRIHILGCGSAL----------------PTLKHYATSQIVEL-----REKLFMIDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 +Q+ R ++ + A+ +H H DH G+ GL F R + VYA + L Sbjct: 43 QIQLRRSKIRFTKLGAIFISHLHGDHCFGLIGLISTFGLLGRTAALHVYAPKELEGMLHA 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 L+ ++ + + +E IP+ RI G+ F Sbjct: 103 QIELFCHGLEFEVV-----FHAVDTTRTAVVYEDRSLTVETIPLQH---RIPRCGYLF 152 >gi|260579681|ref|ZP_05847544.1| metal-dependent hydrolase [Corynebacterium jeikeium ATCC 43734] gi|258602200|gb|EEW15514.1| metal-dependent hydrolase [Corynebacterium jeikeium ATCC 43734] Length = 268 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 84/289 (29%), Gaps = 47/289 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGC S+ P D +S I R + + +++D GP Sbjct: 1 MELVVLGCSGSVEGP---------DSA--------ASGYIVRDTTTANPD-LLLDCGPGV 42 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVYAAPDCM 115 + R + + A V ++H HADH L ++ P + Sbjct: 43 LSAMQRAEDIDPSACHVAFSHMHADHCLDFPSL--LVWRRFHPTASSTQRHQLLGPAIAH 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENN--DVPICMKSAGGVIEAIPILQQHGRISS 173 +HL + + DD T +N + D G H + Sbjct: 101 RHLSAAGADAPERPDDFTDTFDINVYKVGEGLFDATTYPAHPIGPFTLYAATAVHPT-EA 159 Query: 174 LGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSES 223 R + + Y D D + +A H S ++ Sbjct: 160 YLLRVEDNAGNSLVYSGDTAW-TDNLAHIAAGADVFLCEATWGENAEGQPSGMHISGEDA 218 Query: 224 LKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQFSS 268 + + +LTH+ D D ++ ++ A GM+ + Sbjct: 219 GRAAQAAGVGKLVLTHIPPWGDADAAVRGAARHYDGEILVARPGMRITV 267 >gi|29653934|ref|NP_819626.1| metallo-beta-lactamase family protein [Coxiella burnetii RSA 493] gi|29541197|gb|AAO90140.1| metal-dependent hydrolase [Coxiella burnetii RSA 493] Length = 249 Score = 52.1 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 22/228 (9%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGID--GLRGYFLKQKR 104 E ++ +++D G D + + + ID+V +H H DH+ G++ YF + Sbjct: 21 ENSNHKRLLIDCGTDAHHSLKNVNLRYADIDSVYVSHFHFDHVGGLEWLAFSAYFDPAVK 80 Query: 105 PIDVYAAPDCMKHLF-ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++ P + L+ ++L + + + E + Sbjct: 81 KPKLFIHPSMLNILWDHVLSGGLQSLKGESPATLETYFTLAPIREEKYFTWESINFEMVK 140 Query: 164 ILQQH-GR--ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHS 215 + H G+ + S G F + TD FP + + D + D + Sbjct: 141 TIHVHNGKLLLPSYGLFFSLEKTKIFITTDTQFFPHRYADYYREADLIFHDCEIDKTKTG 200 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H + + I K L Y P F G Sbjct: 201 VHAHFQQLMNLNPAIKSK-MWL--------YHYSENDLPDAKAAGFQG 239 >gi|253579742|ref|ZP_04857010.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848741|gb|EES76703.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 302 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 85/285 (29%), Gaps = 60/285 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++++D G ++E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTALMTRYNGSSLLIDCGEGT-QVAIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 + P+ + + L F F + +N I V Sbjct: 78 GNADRTEPLTLVGPKGLERVVNALRVIAPELPFEIKFIEITQPEQVIELNGYRITAFKVN 137 Query: 150 ICMKSAGGVIEA---------------IPILQQHG-----RISSLGF-----------RF 178 + G +E IP+ + I + G R Sbjct: 138 HNVLCYGYTLEILRQGKFSAERAKEQDIPLKYWNPLQKGQTIEADGITYTPEMVLGPARK 197 Query: 179 G-NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELI 230 G + Y TD L + D I + + H + E+ Sbjct: 198 GIRLTYTTDTRP-TESILRNAKESDLFICEGMYGEDDKADKARGYKHMTFREAAVLARDA 256 Query: 231 NPKNAILTHMHVDL----DYDMVLKSTPSRVVPAFDG--MQFSSP 269 K LTH L ++ ++ P DG ++ + Sbjct: 257 RVKEMWLTHYSPSLVRPDEFMDKVREIFPNAYPGKDGKSLELNFE 301 >gi|120436192|ref|YP_861878.1| ribonuclease Z [Gramella forsetii KT0803] gi|117578342|emb|CAL66811.1| ribonuclease Z [Gramella forsetii KT0803] Length = 302 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P++ +S + N ++D G Sbjct: 1 MKITILG----------------CYAATPRSFTNPTSQVLEI-----KNHLFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAPDCMKHLFE 120 +Q+ R ++ I + +H H DH +G+ GL F ++ + +Y + + Sbjct: 40 QVQLRRNKIKFSKIKHIFISHLHGDHFYGLVGLVSTFRLLNRESELHIYGPKGIKEIITL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + L + + + + + + + + +P+ R+ + GF F Sbjct: 100 QLK-----LANSWTNFPLIFHELTSKEPELLFEDTQVSVSTLPLKH---RVYTNGFLFK 150 >gi|308067474|ref|YP_003869079.1| hypothetical protein PPE_00687 [Paenibacillus polymyxa E681] gi|305856753|gb|ADM68541.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 556 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 V++D G F + L E + A++ TH H DHI GI Sbjct: 28 DQDIVVIDCGSKFPDENLPGIDLIVPDVTYLLENQDKVRALIVTHGHEDHIGGIP----- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ + VY ++ + L + +I+ + G Sbjct: 83 YLLKQINMPVYGTKLTIELIK-------IKLREHNLLRDAELHLIDADS-----TVQAGT 130 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+A H LG F GNV + D Sbjct: 131 IQASFFTTVHSIPDCLGVFFQTPEGNVVHTGDFK 164 >gi|290559852|gb|EFD93175.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 250 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 65/203 (32%), Gaps = 27/203 (13%) Query: 53 NTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDV 108 + + D GP +L + I +L TH H DH GI L Y K P+ V Sbjct: 25 DDKIAFDFGPHSLESLLEMGIDPLKIKFLLITHMHLDHYSGIAELLWYRSIHNAKTPLMV 84 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + + P + + NN V + ++ P H Sbjct: 85 FGPKGIKNNTARLM--------EDLKTPRLWSKQVYNN-VKYIEDKSHSFVQVFP---AH 132 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HF 218 I G+R + Y D A+ +E +D L + H Sbjct: 133 HLIPDNGYRVEYKGKTIFYSGDT-AYSKNVVEGAAGVDILFHEMTYTDKDKEAADLWRHS 191 Query: 219 SLSESLKKIELINPKNAILTHMH 241 + S +LK E + K + H+ Sbjct: 192 TYSSTLKVFEESHAKKLVPVHLT 214 >gi|297734394|emb|CBI15641.3| unnamed protein product [Vitis vinifera] Length = 1659 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 30/140 (21%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +++ I+AV+ TH H DHI + + Sbjct: 873 DRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGAL----PWV 928 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + + P + K G Sbjct: 929 IPALDSHTPIFASSFTMELIKKRLK-----EFGIFVPSRLKVFRTR-------KKFIAGP 976 Query: 159 IEAIPILQQHGRISSLGFRF 178 E PI H G Sbjct: 977 FEIEPIRVTHSIPDCCGLVI 996 >gi|147856240|emb|CAN81787.1| hypothetical protein VITISV_026006 [Vitis vinifera] Length = 1616 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 30/140 (21%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +++ I+AV+ TH H DHI + + Sbjct: 862 DRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGAL----PWV 917 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + + P + K G Sbjct: 918 IPALDSHTPIFASSFTMELIKKRLK-----EFGIFVPSRLKVFRTR-------KKFIAGP 965 Query: 159 IEAIPILQQHGRISSLGFRF 178 E PI H G Sbjct: 966 FEIEPIRVTHSIPDCCGLVI 985 >gi|74317002|ref|YP_314742.1| cyclic-AMP phosphodiesterase [Thiobacillus denitrificans ATCC 25259] gi|74056497|gb|AAZ96937.1| cAMP phosphodiesterase class-II [Thiobacillus denitrificans ATCC 25259] Length = 254 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 85/254 (33%), Gaps = 50/254 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S G I R + L + + +++D G Sbjct: 1 MKLTVLGC--SGG---IGSG------------RHTTGLLV--------DDDILIDAGTGI 35 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFR 123 + EQ+ +ID V TH H DH+ G+ L + P+ V+A P+ ++ L Sbjct: 36 -TTLDFEQLQAIDHVFLTHAHLDHVLGLPLLLDSVGDLREAPLIVHALPEVLQVLS---D 91 Query: 124 YCFKA--LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + F D P + + + P+ H + + G Sbjct: 92 HLFNWQLWPDFRKIPSEDAPWLRFEPLGFGEVCTVDGRSFRPLPANH-VVPACGLHVFAE 150 Query: 179 -GNVAYCTDVNAFPA--ESLEKLQNLDFLII-----DALKNGLHSSHFSLSESLKKIELI 230 G + + D A +L + +L LII +AL S +SL + Sbjct: 151 AGGIVFSGDTTHSEAFVAALNAIPDLRHLIIETSFENALAAIAEVSKHHWPDSL--AAEL 208 Query: 231 N----PKNAILTHM 240 N +TH+ Sbjct: 209 NGVKIAPAVWITHL 222 >gi|62289766|ref|YP_221559.1| metallo-beta-lactamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82699694|ref|YP_414268.1| beta-lactamase-like protein [Brucella melitensis biovar Abortus 2308] gi|189024011|ref|YP_001934779.1| Beta-lactamase-like protein [Brucella abortus S19] gi|237815253|ref|ZP_04594251.1| metallo-beta-lactamase family protein [Brucella abortus str. 2308 A] gi|254689073|ref|ZP_05152327.1| Beta-lactamase-like protein [Brucella abortus bv. 6 str. 870] gi|254693556|ref|ZP_05155384.1| Beta-lactamase-like protein [Brucella abortus bv. 3 str. Tulya] gi|254697207|ref|ZP_05159035.1| Beta-lactamase-like protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730103|ref|ZP_05188681.1| Beta-lactamase-like protein [Brucella abortus bv. 4 str. 292] gi|256257322|ref|ZP_05462858.1| Beta-lactamase-like protein [Brucella abortus bv. 9 str. C68] gi|260545484|ref|ZP_05821225.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260754571|ref|ZP_05866919.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260757792|ref|ZP_05870140.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260761617|ref|ZP_05873960.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883598|ref|ZP_05895212.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261213821|ref|ZP_05928102.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297248171|ref|ZP_06931889.1| beta-lactamase-like protein [Brucella abortus bv. 5 str. B3196] gi|62195898|gb|AAX74198.1| metallo-beta-lactamase family protein [Brucella abortus bv. 1 str. 9-941] gi|82615795|emb|CAJ10793.1| Beta-lactamase-like [Brucella melitensis biovar Abortus 2308] gi|189019583|gb|ACD72305.1| Beta-lactamase-like protein [Brucella abortus S19] gi|237790090|gb|EEP64300.1| metallo-beta-lactamase family protein [Brucella abortus str. 2308 A] gi|260096891|gb|EEW80766.1| beta-lactamase domain-containing protein [Brucella abortus NCTC 8038] gi|260668110|gb|EEX55050.1| beta-lactamase domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260672049|gb|EEX58870.1| beta-lactamase domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674679|gb|EEX61500.1| beta-lactamase domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260873126|gb|EEX80195.1| beta-lactamase domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260915428|gb|EEX82289.1| beta-lactamase domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|297175340|gb|EFH34687.1| beta-lactamase-like protein [Brucella abortus bv. 5 str. B3196] Length = 558 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFIAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVDESLRELIQNARGRVAITT 235 >gi|306829799|ref|ZP_07462986.1| ribonuclease Z [Streptococcus mitis ATCC 6249] gi|304427810|gb|EFM30903.1| ribonuclease Z [Streptococcus mitis ATCC 6249] Length = 309 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 83/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVIE------- 160 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 161 ---------AIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G V Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDVVLEDGTEIRAVDYISAPRPGKIITILGDTRK-TN 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVATEAGAKRLLLNHIS 276 >gi|300788144|ref|YP_003768435.1| mRNA degradation ribonucleases J1/J2 [Amycolatopsis mediterranei U32] gi|299797658|gb|ADJ48033.1| mRNA degradation ribonucleases J1/J2 [Amycolatopsis mediterranei U32] Length = 544 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 12/102 (11%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ I+ ++ TH H DHI + + L+ + + +Y + L Sbjct: 47 PDFR--AIEDRLDDIEGLVLTHGHEDHIGAV----PFLLRLRPDLPIYGSKFTNALLAA- 99 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 KA + R P ++ E DV + V +IP Sbjct: 100 -----KAKEHRQRPKLIEVREGERRDVGVFNLEFFAVNHSIP 136 >gi|228926744|ref|ZP_04089812.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832857|gb|EEM78426.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IQTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|153801549|ref|ZP_01956135.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229521020|ref|ZP_04410441.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TM 11079-80] gi|229527238|ref|ZP_04416631.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae 12129(1)] gi|124122954|gb|EAY41697.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|229335246|gb|EEO00730.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae 12129(1)] gi|229341905|gb|EEO06906.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae TM 11079-80] Length = 455 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 +NRR +S+ S R +++D G D + + +DA+ Sbjct: 11 AQNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDAL 70 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L LKQ +Y+ + Sbjct: 71 ILTHAHIDHIGRLPWLLAAGLKQ----PIYSTAATAE 103 >gi|149909570|ref|ZP_01898224.1| metallo-beta-lactamase family protein [Moritella sp. PE36] gi|149807475|gb|EDM67426.1| metallo-beta-lactamase family protein [Moritella sp. PE36] Length = 182 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 21/107 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P R S L I RV+ + +VD G Sbjct: 1 MEIVFLGT--SAGTPS--------------KTRNVSGLAIHRVNSK---KWCLVDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 Q+L ++ + A+ TH H DH +G+ GL Q R ++ Sbjct: 42 QHQLLHTKLSLTQLQAIFITHIHGDHCYGLPGLLASAAMQGRTEPLW 88 >gi|253680880|ref|ZP_04861683.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] gi|253562729|gb|EES92175.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum D str. 1873] Length = 315 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 73/207 (35%), Gaps = 29/207 (14%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ N ++++D G D + L+ V +D ++ THPH DHI G+D + Sbjct: 61 SILITE-----GNHSMLIDAGNNDDGDMVVSYLKKAGVKKLDYIVGTHPHEDHIGGLDNV 115 Query: 96 RGYFLKQKRPIDVYAA-----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 F K + + D +K + ++ I Sbjct: 116 INTFDINKIYMPKKVSTTKTYKDVIKAIKNKNMKITIPKPGESFKLGKATCNIVAPKQNQ 175 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 +SA + + L + + + D E L+ + D LK Sbjct: 176 DYQSAN----------NYSIVIKLTYGSKSFLFTGDAEGISES--EILKGGYDIKADVLK 223 Query: 211 NGLHSSHFSLSESLKKIELINPKNAIL 237 G H S S SE+ + INP A++ Sbjct: 224 VGHHGSRTSTSEA--FLNKINPDVAVI 248 >gi|240274454|gb|EER37970.1| ribonuclease Z [Ajellomyces capsulatus H143] Length = 1123 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 101/321 (31%), Gaps = 96/321 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 603 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 642 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ L+E + + + +H HADH G Sbjct: 643 GQLQRTFAPEELQEVLRDLKVIWISHLHADHHLGTVSVIRAWHKVTHGTQSRTAPPPEQE 702 Query: 92 ------IDGLRGYFLKQKRPID---VYAAPDCMK-----------HLFESFRYCFKALDD 131 ++ R + + + I+ Y++ + + +SF Y D Sbjct: 703 RDLTKLLNEKRLFVVSNAKMIEWLAEYSSVEDYGFDNLLLLAADPTVPDSFHYSHLGSDG 762 Query: 132 RT-----YPPIVNPIVIENNDVPICMKS--AGGVIEAIPILQQHGRIS-SLGFRFG---N 180 ++ P+ + + P+ ++ A G+ + + H + S + F F Sbjct: 763 QSLLDDHGKPLTTFVSFNPDRSPLALQLQQATGLSTLLTVPVMHCQGSMATSFVFPSGLK 822 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ ++ D ++ D L++ H + E+L+ + + Sbjct: 823 VSYSGDCR--PSRDFARV-GADSTVLIHEATFEDDMLQDAQAKRHSTCGEALRVAKQMRA 879 Query: 233 KNAILTHMHVDLDYDMVLKST 253 +N ILTH + + Sbjct: 880 RNVILTHFSQRYTHKPTIPRL 900 >gi|149923189|ref|ZP_01911602.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Plesiocystis pacifica SIR-1] gi|149815963|gb|EDM75479.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Plesiocystis pacifica SIR-1] Length = 267 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 47/219 (21%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + +G G A DP P +S+ + T ++D G Sbjct: 5 SSFELVFVGTG------------EALDPELP-----NTSVLVR------GPQTWLLDCGY 41 Query: 63 DFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHL 118 + R E V +DAV +H HADH G+ LR + RP+ + P + Sbjct: 42 AVPHALWRITEDVDELDAVYLSHFHADHCFGLPALLLRMRLGGRTRPLTLVGGPGSRAKI 101 Query: 119 FESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPILQQHG------ 169 +A+ + YP ++ ++ +A G A H Sbjct: 102 --------EAVLELGYPGSFAAHKCYALDFVELEPGAVTACGGFWARCAPTAHSLVNYAL 153 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 R+ + G R ++AY D S ++ L+ + Sbjct: 154 RLEAEGMR--SLAYSGDGAP-TVASRSLFAGVELLVHEC 189 >gi|67920842|ref|ZP_00514361.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] gi|67856959|gb|EAM52199.1| Beta-lactamase-like [Crocosphaera watsonii WH 8501] Length = 552 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 14/170 (8%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +++D G ++ + +DAV +H H DH G+ L F + +YA+ Sbjct: 39 RILLDCGLGDLSHLIDQTQTPVDAVFCSHAHRDHARGLKSLHEAFPN----LPIYASQVT 94 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L ++ + +E D G + + R S Sbjct: 95 KHLLPLNWPQKNPPKTSNFCQGLSWEKPLELFDDLTVQLFPSGHLPGAASILLSYRTSQ- 153 Query: 175 GFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALKNGLHSSH 217 R + Y D + S+E L+ L D LII+ + SH Sbjct: 154 --RTYKLLYTGDFSLSNLQLVEGLSIEALRGLSPDILIIEGSYGTIRHSH 201 >gi|209524494|ref|ZP_03273042.1| beta-lactamase domain protein [Arthrospira maxima CS-328] gi|209494952|gb|EDZ95259.1| beta-lactamase domain protein [Arthrospira maxima CS-328] Length = 265 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 15/201 (7%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 +N +++D G D + L + + +H HADH G+ G+ K Sbjct: 29 NNRKLLIDCGSDLRHSLYQLGWSYRDVTDIYISHIHADHTGGL-EYMGFTTKFDPNCSRP 87 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + + + ++ + + + IE G +P + Sbjct: 88 KLYLSQELVDLVWNNCLAGSMTSIEDDLATLETYFDIEPISPGSGFTWEGVDFTLVPTIH 147 Query: 167 QHGR---ISSLG--FRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHF 218 + + S G F G V TD P + ++ + + D H Sbjct: 148 IQDKYQDVPSYGLSFSVGGVEVFLTTDTKYCPQKLQGFYESANLIFHDCNTAPVTGGVHA 207 Query: 219 SLSESLKKIELINPKNAILTH 239 E + + I K L H Sbjct: 208 HYQELITLPDKIKNK-IWLYH 227 >gi|147674075|ref|YP_001218520.1| hypothetical protein VC0395_A2642 [Vibrio cholerae O395] gi|146315958|gb|ABQ20497.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227012107|gb|ACP08317.1| conserved hypothetical protein [Vibrio cholerae O395] Length = 455 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 +NRR +S+ S R +++D G D + + +DA+ Sbjct: 11 AQNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDAL 70 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L LKQ +Y+ + Sbjct: 71 ILTHAHIDHIGRLPWLLAAGLKQ----PIYSTAATAE 103 >gi|305681497|ref|ZP_07404304.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305659702|gb|EFM49202.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length = 685 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 28/153 (18%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D GP + +++ ++DA++ TH H DHI Sbjct: 142 NNRLLIVDCGVLFPSSGEPGVDL-ILPDFGP------IEDKIGNVDALVITHGHEDHIGA 194 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LK + + + A+ + + R + P +IE + + Sbjct: 195 I----PWLLKLRPDLPIIASKFTLALIAAKCREHHQ-----------RPKLIEVGNTSVE 239 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + G H LG A Sbjct: 240 NR---GPFNLRFWAVNHSIPDCLGIAIKTKAGL 269 >gi|229138405|ref|ZP_04266996.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] gi|228645076|gb|EEL01317.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] Length = 550 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 78 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 125 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 158 >gi|89890792|ref|ZP_01202301.1| ribonuclease Z [Flavobacteria bacterium BBFL7] gi|89516937|gb|EAS19595.1| ribonuclease Z [Flavobacteria bacterium BBFL7] Length = 301 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 99/324 (30%), Gaps = 83/324 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC ++ T P +S + ++D G Sbjct: 1 MKLTILGCHSATPT----------ASTRP------TSQVLEIRGNL-----FLIDCGEGT 39 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG-YF-LKQKRPIDVYAAPDCMKHL-- 118 M + R + I + +H H DH G+ G+ + L + P+ +Y + + Sbjct: 40 QMAMRTSRVKFSRIKNIFISHLHGDHFFGLIGMISTFCLLGRDTPLTIYGPKGIREIILL 99 Query: 119 -------FESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------ 163 + +F F+ + + + + + + + + G + E P Sbjct: 100 QLKLTKSYTTFDLRFRESESKESQLIYEDDKVTVTTIPLDHRVYTNGYLFEEKPLDRKLD 159 Query: 164 ----------------ILQQHGRISSLGFRFGN------------VAYCTDVNAFPAESL 195 + Q H + G N A+C+D P + Sbjct: 160 VVACEEYGVDQAYYRKVKQGHDIELASGEVISNDLLTFNPVAAKSYAFCSDTMYKPD-IV 218 Query: 196 EKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH-----VDL 244 ++N L ++ H + H + +++ + N IL H +L Sbjct: 219 PIIRNATVLYHESTFLKSHENLCERTKHSTAAQAADIAKQANVGTLILGHYSTRYGDYEL 278 Query: 245 DYDMVLKSTPSRVVPAFDGMQFSS 268 L+ P+ V A DG F Sbjct: 279 FRKEALEIFPT-VELAADGKVFEF 301 >gi|301347996|ref|ZP_07228737.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB056] Length = 525 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + ++DTG P Q V +D V+ +H DH Sbjct: 280 QHPQQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 330 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 331 --SGAFPIIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 386 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+R N D E L++ L ID L Sbjct: 387 AFVASNQNQYSCVVYLQFKKVD--GYR--NFLIMGDAGW--EAEYELLKDYPNLKIDVLV 440 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 441 LGHHGSKHSS---AYDFLATLKPKLAI 464 >gi|295102216|emb|CBK99761.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Faecalibacterium prausnitzii L2-6] Length = 311 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 96/328 (29%), Gaps = 89/328 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG A++ +P +R + V+E G + +++ D G Sbjct: 2 LTITLLGTAATMPLP---------------DR-----ALTAAVAECGGH-SLLFDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAA--------- 111 R V +DAV TH H DHI G+ GL + RP+ +Y Sbjct: 41 QTAARRAGVNLMKMDAVCLTHYHGDHIFGLPGLLQTLGCQGRTRPLALYGPKGLGEVWAA 100 Query: 112 -------------PDCMKH---LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 P+ + L E+F P+ + + + + A Sbjct: 101 LRVLTGPLPYLVCPEVLDAPAALCETFG---GWPQSAKLTPVPTRHRVISQGYRLDLPRA 157 Query: 156 GGVIE------AIPILQ----QHGRISSL-GFRFGN-------------VAYCTDVNAFP 191 G +P+ Q QHG +L G R + D P Sbjct: 158 GRFSPEQARALGVPVKQWKTLQHGESITLDGGRVIRPEAVLGPARQGLSFVFSGDTAPCP 217 Query: 192 AESLEKLQNLDFLIID---ALKNGL----HSSHFSLSESLKKIELINPKNAILTH---MH 241 A D L+ D AL H + +S K L H M Sbjct: 218 ALEKAA-AGADLLLCDSTYALPEQAAQAKQYGHSTFGQSAALAAKAGAKRLWLVHYSPMI 276 Query: 242 VDLDYDMVLKS-TPSRVVPAFDGMQFSS 268 D + ++ +DG + Sbjct: 277 TDPEEELAQAQSLFPAAECGYDGKSITL 304 >gi|49477294|ref|YP_035826.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328850|gb|AAT59496.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 557 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + I+I + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIIIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|15640293|ref|NP_229920.1| hypothetical protein VC0264 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586320|ref|ZP_01676109.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|153818482|ref|ZP_01971149.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821803|ref|ZP_01974470.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227080479|ref|YP_002809030.1| hypothetical protein VCM66_0249 [Vibrio cholerae M66-2] gi|229506939|ref|ZP_04396447.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae BX 330286] gi|229509310|ref|ZP_04398793.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae B33] gi|229516256|ref|ZP_04405704.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC9] gi|229606450|ref|YP_002877098.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae MJ-1236] gi|298500900|ref|ZP_07010702.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9654673|gb|AAF93439.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549440|gb|EAX59468.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|126510958|gb|EAZ73552.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520699|gb|EAZ77922.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227008367|gb|ACP04579.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229346682|gb|EEO11652.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC9] gi|229353625|gb|EEO18562.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae B33] gi|229356044|gb|EEO20963.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae BX 330286] gi|229369105|gb|ACQ59528.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae MJ-1236] gi|297540404|gb|EFH76463.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 455 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 +NRR +S+ S R +++D G D + + +DA+ Sbjct: 11 AQNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDAL 70 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L LKQ +Y+ + Sbjct: 71 ILTHAHIDHIGRLPWLLAAGLKQ----PIYSTAATAE 103 >gi|330802896|ref|XP_003289448.1| hypothetical protein DICPUDRAFT_153836 [Dictyostelium purpureum] gi|325080490|gb|EGC34044.1| hypothetical protein DICPUDRAFT_153836 [Dictyostelium purpureum] Length = 950 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 99/309 (32%), Gaps = 69/309 (22%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG C T+ R + + ++ ++ D G Sbjct: 639 KELEVTFLGT------------C--CSQTSLF--REETCILLNMF----EKGAMLFDVGG 678 Query: 63 DFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGL---------RGYFLKQKRP 105 Y Q+ R+ ++++ + +H H DH G+ L Y +KR Sbjct: 679 GAYSQLFRKYGKEESDKILINLRFIFLSHLHVDHHQGLYKLLEMRHLALEESYVPYEKRQ 738 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-----VIENNDVPICMKSAGGVIE 160 + V A +++ E K + +YP E+ + MK G+ + Sbjct: 739 LIVLAPQGAGRYIRE----LEKTMSFYSYPWKYITFYNFQNYQEDKQLSTFMKQKLGISK 794 Query: 161 AIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH- 214 I + H ++ G V+Y D F + ++ + LI +A + Sbjct: 795 CIAVPVIH-NFNAHGIVVESESGWKVSYSGDTK-FCQQFVDAAVDSTILIHEATFHDHQT 852 Query: 215 -----SSHFSLSESLKKIELINPKNAILTHMHVDLD----------YDMVLKSTPSRVVP 259 SH + SE++K N + +LTH D + + Sbjct: 853 DKAQTKSHSTFSEAIKAYRNSNSFSTVLTHFSQRYPNLQETFNGDTNDSNNDEAFNNITF 912 Query: 260 AFDGMQFSS 268 AFD + + Sbjct: 913 AFDFLTINI 921 >gi|228914288|ref|ZP_04077903.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845282|gb|EEM90318.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|167042781|gb|ABZ07500.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine microorganism HF4000_ANIW137G21] Length = 263 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 81/246 (32%), Gaps = 46/246 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G + R + I + +++D P Q+ Sbjct: 6 FLGTGN----------------AFAPHGRMHALALI--------DGCILIDAPPTLLPQL 41 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---------DVYAAPDCMKH 117 R + I+ +L+TH HADHI G + + +++ + +V+ P K Sbjct: 42 RRAAISPAEIEHLLFTHWHADHIFGF----PFLILERQHVSDAAGERILNVHLRPSGRKI 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM-KSAGGVIEAIPILQQHGR--ISSL 174 L E R F + ++ E+ + + + P HG I Sbjct: 98 LSELCRMGFPGSLETALEERIDWHQAESGVLAKSGWRFERFPVCHTPETDPHGYELIHQS 157 Query: 175 GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKN 234 GFRF + ES N+ + + H + S+ + E +P+ Sbjct: 158 GFRFLHCGDSGPCEGI--ESRAARANVILVEMGVPDFVQSPHHHTPSDVIALAER-HPEA 214 Query: 235 AIL-TH 239 IL TH Sbjct: 215 MILVTH 220 >gi|300117369|ref|ZP_07055159.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] gi|298725204|gb|EFI65856.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] Length = 550 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 78 FLKQLN-VPIYATKLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 125 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 158 >gi|229121261|ref|ZP_04250492.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|228662106|gb|EEL17715.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|257056513|ref|YP_003134345.1| putative hydrolase of the metallo-beta-lactamase superfamily [Saccharomonospora viridis DSM 43017] gi|256586385|gb|ACU97518.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Saccharomonospora viridis DSM 43017] Length = 565 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ I+A++ TH H DHI + + L+ + + VY + + L Sbjct: 68 PDFR--AIEDRIGDIEALVLTHGHEDHIGAV----PFLLRMRPDLPVYGSRFTLALLEA- 120 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P +V + V G E H +L Sbjct: 121 -----KCKEHRQRPTLVQVAEGQRRRV--------GPFELEFFAVNHSIPDALA 161 >gi|228945312|ref|ZP_04107667.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814284|gb|EEM60550.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|225456284|ref|XP_002279798.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 886 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 30/140 (21%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G F +++ I+AV+ TH H DHI + + Sbjct: 100 DRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGAL----PWV 155 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + + P + K G Sbjct: 156 IPALDSHTPIFASSFTMELIKKRLK-----EFGIFVPSRLKVFRTR-------KKFIAGP 203 Query: 159 IEAIPILQQHGRISSLGFRF 178 E PI H G Sbjct: 204 FEIEPIRVTHSIPDCCGLVI 223 >gi|148547040|ref|YP_001267142.1| ribonuclease Z [Pseudomonas putida F1] gi|166991500|sp|A5W1E8|RNZ_PSEP1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|148511098|gb|ABQ77958.1| RNAse Z [Pseudomonas putida F1] Length = 319 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 34/181 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K R ++ I +VD G Sbjct: 1 MDLLFLGT--SAGVPT-------------KARNVSATAVIEASGSHW----YLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 ++L + + A+ TH H DH G+ GL R P++V + + Sbjct: 42 QHRLLHTPLSIRDLRAIFITHVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQ 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 P + V + ++ + H R+ S+GF F Sbjct: 102 ----------GLVASDTFLPFELRLLPVEALIAWRSETLQVTTVQLSH-RVPSVGFVFTE 150 Query: 181 V 181 + Sbjct: 151 I 151 >gi|326798213|ref|YP_004316032.1| beta-lactamase [Sphingobacterium sp. 21] gi|326548977|gb|ADZ77362.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 274 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 56/229 (24%) Query: 56 VIVDTGPDFYM---QVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G ++ R + SI A+ +H H+DHI G+ L K I VY Sbjct: 26 VLIDAGISCREIERRMTRLGLSIPSIKAIFISHEHSDHIKGLCRLS-----LKYRIPVYI 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + F A + + +D G + P + H Sbjct: 81 NQRTLTATG-----FFIAPE--------LLHLFHASD-----PIQIGDFQITPFAKYHDA 122 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 F + TD+ + ++A L G + Sbjct: 123 ADPYSFVVEGGSIRIGVFTDIGRVCERVQHHFSQCHAVFLEANYDDDLLDRGRYPHFLKN 182 Query: 216 ------SHFSLSESLKKIELINPK-----NAILTHMHVDLDYDMVLKST 253 H S ++L+ +N + + L+H+ D + ++ Sbjct: 183 RIRGGYGHLSNKQALELF--LNHRTDNLSHLFLSHLSKDNNCPNLVTEL 229 >gi|228952093|ref|ZP_04114188.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229078895|ref|ZP_04211447.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228704309|gb|EEL56743.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228807625|gb|EEM54149.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|224543699|ref|ZP_03684238.1| hypothetical protein CATMIT_02909 [Catenibacterium mitsuokai DSM 15897] gi|224523352|gb|EEF92457.1| hypothetical protein CATMIT_02909 [Catenibacterium mitsuokai DSM 15897] Length = 256 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 42/163 (25%) Query: 54 TTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T +++D G + ++ + + ID VL TH H DH + I + Sbjct: 28 TGILIDCGISKKQLTYRLKEIGYTIDDIDYVLLTHDHTDH--------------NKNIHI 73 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQ 167 + + Y N + E++++ G IE + Sbjct: 74 F-------------------DKEMVYTAKGNIADLDEDHELIPYTSYTFGDIEVYVLRIS 114 Query: 168 HGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 H + +GF F + Y TD ++ E + NL++ II+ Sbjct: 115 HDATNPIGFIFSGDETLLYMTDTGYVSQKNKELIHNLNYYIIE 157 >gi|167633283|ref|ZP_02391608.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0442] gi|170686219|ref|ZP_02877441.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0465] gi|254683198|ref|ZP_05147059.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254740959|ref|ZP_05198647.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|167531321|gb|EDR93999.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0442] gi|170669916|gb|EDT20657.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0465] Length = 557 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|315641462|ref|ZP_07896534.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482750|gb|EFU73274.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 562 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 24/153 (15%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + R ++ +DT PDF L E + V TH HAD I + + Sbjct: 31 IFVLDCGLRYPENELLGIDTVIPDF--SYLEENAERVAGVFLTHGHADAIGALP-----Y 83 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 ++ P+ V+ ++ + + Y VI+ + + G Sbjct: 84 FLERVPVPVFGTKLTVELAKMI---VHRNEATKKYK---EFHVIDEH-----TEIDFGTT 132 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 H S+G GN+ Y D Sbjct: 133 TVSFFRTTHSIPESVGISLKTEAGNIVYTGDFK 165 >gi|229043545|ref|ZP_04191254.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH676] gi|228725767|gb|EEL77015.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH676] Length = 417 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKILFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|229090669|ref|ZP_04221902.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|228692611|gb|EEL46337.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|229109245|ref|ZP_04238844.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock1-15] gi|228674255|gb|EEL29500.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock1-15] Length = 417 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKILFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|254172164|ref|ZP_04878840.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] gi|214034060|gb|EEB74886.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] Length = 270 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 13/89 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGL 95 S + V+VDTG D + + L IDA+ TH H DH G+ Sbjct: 24 SALVEHRG-----KKVLVDTGTDGKVLLGNMTELGFSPDEIDAIFLTHGHYDHTGGL--- 75 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 R + + IDVYA P Y Sbjct: 76 RAFLESRNSGIDVYAHPGIFARRIALKPY 104 >gi|148992216|ref|ZP_01821939.1| ribonuclease Z [Streptococcus pneumoniae SP9-BS68] gi|168488355|ref|ZP_02712554.1| ribonuclease Z [Streptococcus pneumoniae SP195] gi|147928842|gb|EDK79854.1| ribonuclease Z [Streptococcus pneumoniae SP9-BS68] gi|183573093|gb|EDT93621.1| ribonuclease Z [Streptococcus pneumoniae SP195] gi|332074479|gb|EGI84955.1| ribonuclease Z [Streptococcus pneumoniae GA17570] Length = 309 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 82/295 (27%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKISKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVIE------- 160 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 161 ---------AIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHIS 276 >gi|229069265|ref|ZP_04202555.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|228713752|gb|EEL65637.1| Zn-dependent hydrolase [Bacillus cereus F65185] Length = 550 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 78 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 120 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 121 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 158 >gi|260587145|ref|ZP_05853058.1| ribonuclease Z [Blautia hansenii DSM 20583] gi|260542340|gb|EEX22909.1| ribonuclease Z [Blautia hansenii DSM 20583] Length = 316 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 80/300 (26%), Gaps = 99/300 (33%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P RR +SL + + +++D G + V Sbjct: 20 LLGTGGMMPLP----------------RRKLTSLMTRY-----NGSNLMIDCGEGTQVAV 58 Query: 69 LREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + ID + +TH HADHI G+ GL ++ P+ + ++ + Sbjct: 59 KEKGWSFKPIDVICFTHYHADHISGLPGLLLTMGNAERTEPLTLIGPKGLVRVVSAL--- 115 Query: 125 CFKALDDRTYPPIVNPIV--IENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-----R 177 R P + + IE + G H ++ G+ R Sbjct: 116 -------RVIAPELPFEIQCIELTQPEETYELNGY--HITAFRVNH-NVTCYGYTLEIKR 165 Query: 178 FGNV----------------------------------------------AYCTDVNAFP 191 G Y TD Sbjct: 166 AGKFDAQRAKEQNIPLKCWNSLQKGETVVCEGNTYTPDMVLGAPRKGIKLTYTTDTRPVK 225 Query: 192 AESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 A S + D I + + H + E+ + + LTH L Sbjct: 226 AIS-DHAAGSDLFICEGMYGEQDKDDKARAYKHMTFKEAAQLAKEAQVAEMWLTHYSPSL 284 >gi|254475247|ref|ZP_05088633.1| metallo-beta-lactamase family protein [Ruegeria sp. R11] gi|214029490|gb|EEB70325.1| metallo-beta-lactamase family protein [Ruegeria sp. R11] Length = 550 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPH 85 + + G V+VD G PD L+E+ ++ + TH H Sbjct: 16 AYVYGYGKPGKERLVLVDLGVTFPDMDSTPGVDLIMPDIRW--LKERADQLEGIFITHAH 73 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC------FKALDDRTYPPIVN 139 DHI + L + +YA K + + Sbjct: 74 EDHIGAVAHL-----YRDLNTPIYARAFTANLARRKMDEAGLDSEQVKTVSAWPEVTQLG 128 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF-----PAES 194 P I + + +GG++ P GR+ G + TD E Sbjct: 129 PFTIGVAPISHSIPESGGLVIDTPA----GRVVHTGD------FKTDPTPIVGEPFDPEM 178 Query: 195 LEKL--QNLDFLIID 207 ++ + L+ D Sbjct: 179 WAEIAKDGVKALVCD 193 >gi|325662330|ref|ZP_08150939.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086133|ref|ZP_08335215.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471332|gb|EGC74555.1| hypothetical protein HMPREF0490_01678 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406292|gb|EGG85806.1| hypothetical protein HMPREF0987_01518 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 207 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY---------AAPDCMK 116 + LRE+ L AVL TH H DHI G+D L + P+ VY A P Sbjct: 39 AEFLREEGLKPQAVLLTHGHFDHIMGLDALLEEY-----PVPVYVHEAEKGLIADPKTNL 93 Query: 117 HLFESFRYCFK 127 L + Y F+ Sbjct: 94 SLTYTNGYVFE 104 >gi|260461625|ref|ZP_05809872.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032695|gb|EEW33959.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 391 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 66/186 (35%), Gaps = 35/186 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGI 92 R+SL +S S+R +++D G Y L V IDAV +H H DH+ + Sbjct: 14 RTSLAVSSGSDR-----ILLDIGIKVGASGAEYYPALDGSVADIDAVFVSHAHEDHVGAL 68 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDV--- 148 + L + ++ + + + Y A R P + E D Sbjct: 69 ----SWLLSRGYAGPIFMTAETREEAPATLAAYADPADFKRFPIPDDRIEIFEPGDTLKS 124 Query: 149 ---PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE---SLEKLQNLD 202 I +G V+ + G+ VAY DV P ++ + + D Sbjct: 125 GNLTIRTGRSGHVVGGVWFAVDDGK--------SRVAYSADV--VPDSNVFVMDTIPHCD 174 Query: 203 FLIIDA 208 L+ DA Sbjct: 175 LLVFDA 180 >gi|228932994|ref|ZP_04095857.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826595|gb|EEM72366.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 564 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 92 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 138 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 139 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 172 >gi|199597661|ref|ZP_03211089.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus rhamnosus HN001] gi|229551253|ref|ZP_04439978.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1] gi|199591468|gb|EDY99546.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus rhamnosus HN001] gi|229315416|gb|EEN81389.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus rhamnosus LMS2-1] gi|259651067|dbj|BAI43229.1| hydrolase [Lactobacillus rhamnosus GG] Length = 278 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 45/234 (19%) Query: 38 TRSSLKISRVSERGS-----NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + V+VD G + M+ + + +D+V TH H+D Sbjct: 16 MRVSVLASSSSGNATYIETPGHKVLVDAGLSGKKIEALMKSIGRDLTDVDSVFITHEHSD 75 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ G+ L ++ ++VYA L +S + + D Sbjct: 76 HVRGVGVLA----RRYPQLNVYANAKTFAALPKSVGKI----PEAQLRLFDMGTTLTLGD 127 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + A Q H + TD +++ D +++ Sbjct: 128 LDVESFGVSHDAAAPQFYQFHHDGKA-------FTILTDTGYVSDRVAGTIRDADAYVME 180 Query: 208 A------LKNGLHS-----------SHFSLS---ESLKKIELINPKNAILTHMH 241 L+ G + H S ++L + + K L H+ Sbjct: 181 CNHDLEMLRTGPYPWPLKQRILSDQGHLSNEDGADALMDVIGLRTKRIYLGHLS 234 >gi|295104302|emb|CBL01846.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Faecalibacterium prausnitzii SL3/3] Length = 312 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 41/185 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG A++ +P + V+E G + ++++D G Sbjct: 2 LTITLLGTAATMPLPE--------------------RALTAAVAECGGH-SLLLDCGEGT 40 Query: 65 YMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 R V + DA+ TH H DHI G+ GL Q RP+ + ++ Sbjct: 41 QTAARRAGVNLMRADAICLTHYHGDHIFGLPGLLQTLGAQGRTRPLVLLGPEGLLEVWRA 100 Query: 121 SF------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + Y K L R P+ + + +P+ +H R+ SL Sbjct: 101 VYALTGPLPYAVKPLVCRAGQPVALDALSDGWPAGA---------TLLPVATKH-RVRSL 150 Query: 175 GFRFG 179 G+R Sbjct: 151 GYRLD 155 >gi|256828889|ref|YP_003157617.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] gi|256578065|gb|ACU89201.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 395 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 66/223 (29%), Gaps = 40/223 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 TILG G +P ++ +SS + D G Sbjct: 86 GEMRVTILGSG------------------DPFVKKGQSSASVLIEVGNAERDFFFFDLGS 127 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDC---- 114 L+ V + V TH HADH+ + L K R + V+ Sbjct: 128 GSLANFNGLKLPVTATTKVFLTHLHADHVGDMPTLVWSLAKAGRSVPVEVWGPSGATREL 187 Query: 115 -----MKHLFESFRYCFKALDDR-TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 +HL + + +L + + I E + + +H Sbjct: 188 GTLAYAEHLLAAHAWDTASLSEHPSGRSGARMIATEFPHDTPTVVYERNGVTISSFPVKH 247 Query: 169 GRISSLGFRFG----NVAYCTDVNAFP-AESLEKLQ-NLDFLI 205 +G+R +V + D P +LE + +D LI Sbjct: 248 ILPGPVGYRIDYQGRSVVFTGDT--MPTETTLEACKGGVDLLI 288 >gi|160937553|ref|ZP_02084914.1| hypothetical protein CLOBOL_02444 [Clostridium bolteae ATCC BAA-613] gi|158439622|gb|EDP17372.1| hypothetical protein CLOBOL_02444 [Clostridium bolteae ATCC BAA-613] Length = 228 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 57/191 (29%), Gaps = 34/191 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVL-REQVLSID--AVLYTHPHADHIHGIDGL 95 +S +VD G Y ++ R + VL TH HADH+ + L Sbjct: 18 NTSAWFEM-----DGCLFLVDCGETVYELLMKRSDLREYRQIYVLLTHLHADHVGSLGSL 72 Query: 96 RGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y R I V + L I E + + Sbjct: 73 ISYNYCILGRKICVIHPRATVVELLRLMG-----------------IKDEFYNYYQELPE 115 Query: 155 AGGVIEAIPILQQHG-RISSLGFRFG----NVAYCTDVNAFPAESLEKLQN--LDFLIID 207 G + A P+ +H + G+ + Y D P L++ LD + D Sbjct: 116 DVGCLRAEPVPVEHADNMDCFGYILEAEGMRIYYSGDSARMPERIAGMLKDGKLDAVYHD 175 Query: 208 A-LKNGLHSSH 217 L N SH Sbjct: 176 TSLHNPPSPSH 186 >gi|89897933|ref|YP_515043.1| beta-lactamase superfamily metal dependent hydrolase [Chlamydophila felis Fe/C-56] gi|89331305|dbj|BAE80898.1| metal dependent hydrolase of the beta-lactamase superfamily I [Chlamydophila felis Fe/C-56] Length = 262 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 69/215 (32%), Gaps = 51/215 (23%) Query: 56 VIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G +L V I A+ +H H+DHI GI + + Sbjct: 25 ILIDLGISKQQVTQGLLSMNVHPEDIHAIFVSHEHSDHISGIKSFIKAYNT-----PIIC 79 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + + +++ + ++ H Sbjct: 80 NLETARSICQ----------------LLDVHP-TFKIFSTGTIFSFCDLKIQTFNLPHDA 122 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA----------LKNGLHSS 216 + +GF F + +C+D+ + +L + D+L+I+A + ++ Sbjct: 123 VDPVGFIFYYRGEKLGFCSDLGWVTSWIAHELYDCDYLLIEANHDPELVRQSSRPDIYKK 182 Query: 217 -------HFSLSESLKKIELI---NPKNAILTHMH 241 H S E + ++ I K L H+ Sbjct: 183 RVLSKLGHISNHECGELLQKILTPKIKKIYLAHLS 217 >gi|325273448|ref|ZP_08139697.1| ribonuclease Z [Pseudomonas sp. TJI-51] gi|324101425|gb|EGB99022.1| ribonuclease Z [Pseudomonas sp. TJI-51] Length = 126 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 39/120 (32%), Gaps = 23/120 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP + S + V E + +VD G Sbjct: 1 MDLLFLGT--SAGVPT---------------KARNVSA--TAVVEASGSHWYLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L V + AV TH H DH G+ GL R P+++ L + Sbjct: 42 QHQLLHTPLSVRDLQAVFITHVHGDHCFGLPGLLASAGMSGRNQPLNIVLPAALHGWLRQ 101 >gi|30261710|ref|NP_844087.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|30255938|gb|AAP25573.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] Length = 549 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|312793414|ref|YP_004026337.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180554|gb|ADQ40724.1| beta-lactamase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 295 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 42/213 (19%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V +D V+ THPH DHI +D + Sbjct: 58 SILIKTPG----NKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS- 154 K+ E F K + +T+ ++N + +N + I Sbjct: 114 IS------------------KYDIERFYTINKTTNTQTFEDMLNALKKKNLKISIARPFD 155 Query: 155 ----AGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 G + + L+ + + L F V + D++ + ++N+ + Sbjct: 156 RLKLNGVTLTFLSPLKDYDDLNDSSVVVMLEFAGKRVLFTGDISK--NVEYDIVRNVHDI 213 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 D LK H S ++ + SL +E +NPK AI+ Sbjct: 214 KADVLKVSHHGS-YAATSSL-FLEKVNPKVAII 244 >gi|301512408|ref|ZP_07237645.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB058] Length = 573 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + ++DTG P Q V +D V+ +H DH Sbjct: 328 QHPQQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 378 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 379 --SGAFPIIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 434 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+R N D E L++ L ID L Sbjct: 435 AFVASNQNQYSCVVYLQFKKVD--GYR--NFLIMGDAGW--EAEYELLKDYPNLKIDVLV 488 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 489 LGHHGSKHSS---AYDFLATLKPKLAI 512 >gi|49184537|ref|YP_027789.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|165869549|ref|ZP_02214208.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0488] gi|167639105|ref|ZP_02397378.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0193] gi|170706417|ref|ZP_02896877.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0389] gi|177650627|ref|ZP_02933594.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0174] gi|190566330|ref|ZP_03019248.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis Tsiankovskii-I] gi|254723788|ref|ZP_05185574.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254734550|ref|ZP_05192262.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254755201|ref|ZP_05207235.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254759737|ref|ZP_05211761.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|49178464|gb|AAT53840.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164714989|gb|EDR20507.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0488] gi|167512895|gb|EDR88268.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0193] gi|170128515|gb|EDS97382.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0389] gi|172083771|gb|EDT68831.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. A0174] gi|190562465|gb|EDV16432.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis Tsiankovskii-I] Length = 557 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|315037332|ref|YP_004030900.1| hypothetical protein LA2_00525 [Lactobacillus amylovorus GRL 1112] gi|325955800|ref|YP_004286410.1| hypothetical protein LAC30SC_00395 [Lactobacillus acidophilus 30SC] gi|312275465|gb|ADQ58105.1| hypothetical protein LA2_00525 [Lactobacillus amylovorus GRL 1112] gi|325332365|gb|ADZ06273.1| hypothetical protein LAC30SC_00395 [Lactobacillus acidophilus 30SC] gi|327182637|gb|AEA31084.1| hypothetical protein LAB52_00485 [Lactobacillus amylovorus GRL 1118] Length = 265 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 74/241 (30%), Gaps = 55/241 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + ++ D G D + ID +H H DH G+ G ++ Sbjct: 24 ILMDAGLSGKKTKDLLADVGVD---------INDIDMAFLSHDHTDHSGGL----GVLMR 70 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ID +A ++L ++ P IE G ++ Sbjct: 71 RYPRIDAFANSGTWQYLLDT--------QKIGKLPAEQMNTIEPGQTK-----TFGDLDV 117 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKN 211 + H + F VA+ TD E +++ D +++ L++ Sbjct: 118 MAFATSHDAAEPQYYVFTSGGKRVAFLTDTGYVSEEVEGTIEDADAYMMEFNYDTMMLRD 177 Query: 212 GLHS-----------SHFSLSESLKKIELI---NPKNAILTHMHVD-----LDYDMVLKS 252 G +S H S ++ + + + K+ L H L ++ + Sbjct: 178 GPYSWPLKQRILSDVGHLSNDQAAQALVDVVTSKTKHIFLAHRSQHNNTEYLAHETAKEM 237 Query: 253 T 253 Sbjct: 238 L 238 >gi|312880279|ref|ZP_07740079.1| beta-lactamase domain protein [Aminomonas paucivorans DSM 12260] gi|310783570|gb|EFQ23968.1| beta-lactamase domain protein [Aminomonas paucivorans DSM 12260] Length = 304 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 80/238 (33%), Gaps = 39/238 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLR------GYFLK 101 +VD GP + + ++D VL +H H DH ++ L G+ + Sbjct: 39 GGFRGVVDPGPGCLVHLCSAVPELNPTALDGVLLSHRHIDHCTDMNVLVEAMMEGGFVQR 98 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + L + L + + N + S G E Sbjct: 99 GTVALP-------EDALRGEEPVLLQYLARK----VENLHTWRDG----TRLSLGDRAEV 143 Query: 162 IPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDAL--KNGLH 214 + H + G F +D F A + E+ D L+++ + Sbjct: 144 EAVGLLHHGVQCYGMVFRGEGLPPWGIISDTRPFAALA-ERFSCCDILVLNVTLQRELPG 202 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSR---VVPAFDGMQF 266 HF++ + + ++ + P+ +LTH+ + D + + S S VV A DG+ Sbjct: 203 LDHFAIPDVERLLQEMAPRVLLLTHLGRGILSRDPETLASSLGSGRTDVVAARDGLVV 260 >gi|307322650|ref|ZP_07601983.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] gi|306891696|gb|EFN22549.1| beta-lactamase domain protein [Sinorhizobium meliloti AK83] Length = 214 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 23/207 (11%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 + ++H H DH+ G+ F + + V+A + F V Sbjct: 6 LFFSHSHYDHVLGLPFFEPLFDPRVA-VTVWAGHLFGSMGAREMVHAFLNAPWTERNGHV 64 Query: 139 NPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE 193 + + + D P + GG I H +G+R A+ D+ P Sbjct: 65 DDLGVTFKDFEPGTLLDVGGGIRIKTAAINHPG-GCVGYRIQFGGRAAAFVYDIEHMPGA 123 Query: 194 ----SLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKN-AILTHMHV 242 +L+ + D ++ D+ ++ + H S + ++ + K A+ HM Sbjct: 124 LDPVALDLMHGADLVVYDSAYDDSEMETFRNFGHSSWQQGIRLATVAGAKRLALFHHMPE 183 Query: 243 DLDYDMVL-----KSTPSRVVPAFDGM 264 D ++ K+ V A G+ Sbjct: 184 RTDLQLLEIEQKAKALLPTVFLARQGL 210 >gi|218902824|ref|YP_002450658.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH820] gi|218534791|gb|ACK87189.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus AH820] Length = 557 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|319411805|emb|CBQ73848.1| related to Ribonuclease Z / related to thiamin pyrophosphokinase 1 [Sporisorium reilianum] Length = 792 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 21/163 (12%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV------LREQVLSIDAVLYT 82 P + R SSL + N TV+VD G Q+ + E++ ++ +L T Sbjct: 13 TSYMPNSTRNYSSLLF-----KLDNHTVMVDCGEGTQRQLRSRYVGVDERLSNLKTILVT 67 Query: 83 HPHADHIHGI----------DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 H HADH+ G+ G+ +++Y P + + C+ L + Sbjct: 68 HLHADHVLGLVPLLMSMMGPSGVSPATEAASPRVEIYGPPGLRALIRTTLSLCYSQLSGK 127 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + IP L H SS G Sbjct: 128 YVVHEFVWPRHDQLPDGSPHALTDQPERTIPDLPLHQGESSTG 170 >gi|255717346|ref|XP_002554954.1| KLTH0F17710p [Lachancea thermotolerans] gi|238936337|emb|CAR24517.1| KLTH0F17710p [Lachancea thermotolerans] Length = 815 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 99/346 (28%), Gaps = 108/346 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG---SNTTVIV 58 K LG G+SL P R S + N +++ Sbjct: 460 KGKIEVVTLGTGSSL----------------PSKYRNVISTLVKIPYNNKGKIDNRNILL 503 Query: 59 DTGPDFYMQVLREQVLSID---------AVLYTHPHADHIHGIDGLRGYFLKQKRPID-- 107 D G + +LR + S+D + +H HADH GI + + KQ Sbjct: 504 DAGENTLGAILRL-IPSVDIPGFFRDLKLIYLSHLHADHHLGIASILNEWHKQNLTDPSA 562 Query: 108 -VY------AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + L + L + +V+ + P+ + + Sbjct: 563 VLYIVVPWQYNIFVKEWLSLENSEILERLRYVSCEHLVDGGYVRKELKPVPFEDFAAATK 622 Query: 161 A------------------IPILQQHGRISSLGF-----RFGNVAYC--------TDVNA 189 I Q + + L F + + AY +D + Sbjct: 623 PALKKRRLEFDENSSFRDRETITQMYRDLKILRFQTCRAKHCDWAYSNSISFFTGSDSSG 682 Query: 190 FPAESL--------EKL-----QNLDFLI----------IDALKNGLHSSHFSLSESLKK 226 S EK + D LI DA+K H +++E+++ Sbjct: 683 IFKVSYSGDTRPNVEKFSKTIGRQSDLLIHEATLDNDLVEDAIKKR----HCTINEAIEV 738 Query: 227 IELINPKNAILTHMHVDLDY--------DMVLKSTPSRVVPAFDGM 264 + + ILTH ++ + AFDGM Sbjct: 739 SNKMGARKLILTHFSQRYPKLPQIGNSIEIEAQEY----CFAFDGM 780 >gi|196033475|ref|ZP_03100887.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus W] gi|195993909|gb|EDX57865.1| RNA-metabolising metallo-beta-lactamase [Bacillus cereus W] Length = 557 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 85 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|58336430|ref|YP_193015.1| hypothetical protein LBA0082 [Lactobacillus acidophilus NCFM] gi|58253747|gb|AAV41984.1| hypothetical protein LBA0082 [Lactobacillus acidophilus NCFM] Length = 265 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 46/231 (19%) Query: 52 SNTTVIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G Q+L E + ID +H H DH G+ G +++ I Sbjct: 20 GQHKILMDAGLSGKKTKQLLDEVGIDINEIDMAFLSHDHTDHSGGL----GVLMRRYPKI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D +A ++L ++ + P VIE G ++ Sbjct: 76 DAFANSGTWQYLLDTHK--------IGKLPAEQMNVIEPGQTK-----TFGDLDVTAFAT 122 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS- 215 H + F A+ TD +++ D +++ L++G +S Sbjct: 123 SHDAAEPQYYVFTSGGKRAAFLTDTGYVSETVEGTIEDADAYMMEFNYDTMMLRDGPYSW 182 Query: 216 ----------SHFSLSESL-KKIELINP--KNAILTHMHVDLDYDMVLKST 253 H S ++ ++++ P K+ L H + + + + T Sbjct: 183 SLKQRILSDVGHLSNEDAAQALVDVVTPKTKHIFLAHRSQHNNTEYLARET 233 >gi|331002259|ref|ZP_08325778.1| hypothetical protein HMPREF0491_00640 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411353|gb|EGG90769.1| hypothetical protein HMPREF0491_00640 [Lachnospiraceae oral taxon 107 str. F0167] Length = 229 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 34/217 (15%) Query: 50 RGSNTTVIVDTGP-DFYMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQ-KRP 105 N ++D G F R ++ D VL TH HADHI + + + Sbjct: 24 EHDNCLYLIDCGESTFRAMFSRNEIYDYDNIVVLLTHLHADHIGSLGSFLSFCKNVLDKK 83 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + A + + ++ + Y + E + I +K + Sbjct: 84 VLLAAEENTIVNILAQ-----SGVHTDKYNFTTDFKECEAIGLSIYVKREIHATD----- 133 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESL-EKLQN------LDFLIIDALKNGLH 214 + GF F + Y D + P++ L L + +D Sbjct: 134 -----MLCCGFIFECNGEKIYYSGDTSNVPSDILNAFLSGEIKTMYQECTFLDT----DS 184 Query: 215 SSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 +SHFSL + + I + H+ D++ D+V Sbjct: 185 TSHFSLKKLCEIIPYEERQRVYCMHLGDDIEDDIVKA 221 >gi|241896329|ref|ZP_04783625.1| ribonuclease Z [Weissella paramesenteroides ATCC 33313] gi|241870309|gb|EER74060.1| ribonuclease Z [Weissella paramesenteroides ATCC 33313] Length = 339 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 31/179 (17%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 LG GA P + R + + + + E N + D G Sbjct: 13 TMQIEFLGTGAGS----------------PAHFRNVTGVALRLLEE--INEVWLFDVGEG 54 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 Q+L+ + + + TH H DHI+G+ GL Q + +Y + + Sbjct: 55 TQRQMLQSTIRPRKVTKIFITHLHGDHIYGLPGLLSSRSFQGGEDELTIYGPKGIRQFVE 114 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + TYP + ++ DV + H RI+S G+R Sbjct: 115 VSLR---VSQTHLTYPIKFVELPVDGGDV-----LQTDKFTVSALPLDH-RITSFGYRV 164 >gi|193216527|ref|YP_001999769.1| metallo-beta-lactamase superfamily protein [Mycoplasma arthritidis 158L3-1] gi|193001850|gb|ACF07065.1| metallo-beta-lactamase superfamily protein [Mycoplasma arthritidis 158L3-1] Length = 594 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 23/160 (14%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYCFK 127 L+E I + TH H DHI G+ L ++ I +YA +++L F + Sbjct: 54 LKENKDRIAGLFITHGHEDHIGGVPHLV-----RQVDIQRIYAPRIAIQYLKLKFEDL-R 107 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFG--NV 181 + I V E + + +A I I + +G + G FRF + Sbjct: 108 IKKRVEFIEINKDDVFEFGECSVDFWTAQHSIPDAFGIRVKTPNGSLMMTGDFRFDYHPI 167 Query: 182 AYCTDVNAFPAESLEKL--QNLDFLIID---ALKNGLHSS 216 TD + LEK+ + LD L D A++ S Sbjct: 168 GNLTDFSK-----LEKIGKEGLDVLFSDSTNAMRPNHSPS 202 >gi|301596272|ref|ZP_07241280.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB059] Length = 269 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + ++DTG P Q V +D V+ +H DH Sbjct: 24 QHPQQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 74 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 75 --SGAFPIIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 130 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+R N D E L++ L ID L Sbjct: 131 AFVASNQNQYSCVVYLQFKKVD--GYR--NFLIMGDAGW--EAEYELLKDYPNLKIDVLV 184 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 185 LGHHGSKHSS---AYDFLATLKPKLAI 208 >gi|251797810|ref|YP_003012541.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247545436|gb|ACT02455.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 249 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 71/196 (36%), Gaps = 14/196 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPID 107 ++VD G + ++AVL +H HADH+ G++ + F KRP+ Sbjct: 32 DGFKLLVDCGITLPRSLHDAGYSFDDLNAVLISHMHADHVGGLEEYAFQMMFRYGKRPV- 90 Query: 108 VYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y A + L ++ R + I+ + C G ++ I Sbjct: 91 LYIADTLVDPLWEQTLRGGLTQEPLNALSDFFDVRPIKEGES--CEIHPGIHVKLIRTDH 148 Query: 167 QHGRISSLGFRFGN-VAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSSHFSLSES 223 G++ S F F Y D+ F L++L + + D H SL E Sbjct: 149 IAGKL-SYSFLFNETFFYSADMK-FDGGLLKELIAGGVTTVFHDCQLISPGVVHASLDEL 206 Query: 224 LKKIELINPKNAILTH 239 L E I + L H Sbjct: 207 LTLPEDIQ-EKMWLMH 221 >gi|327194823|gb|EGE61657.1| putative beta-lactamase family protein [Rhizobium etli CNPAF512] Length = 556 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 47/217 (21%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLANERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + V+A+ L + + + P V Sbjct: 80 DHYGALADLWP-----GLNVPVFASAFTSGLLEAKRNFEKARIGEVPVTPFKAGDTINVG 134 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P G + G ++ ++ TD Sbjct: 135 PFSIEGVAVNHSIPEPMSLMIRTPA----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 185 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 186 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 222 >gi|307708427|ref|ZP_07644893.1| ribonuclease Z [Streptococcus mitis NCTC 12261] gi|307615526|gb|EFN94733.1| ribonuclease Z [Streptococcus mitis NCTC 12261] Length = 309 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVHAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|297161205|gb|ADI10917.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces bingchenggensis BCW-1] Length = 399 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR AC R ++L I + +++D P Sbjct: 1 MELTLLGTGAPAGLPRHGCPCAACATAVGDEARAATALLI--------DGALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R + + VL +HPH Sbjct: 53 AFAAARAGYSLTGVVQVLLSHPH 75 >gi|26990736|ref|NP_746161.1| ribonuclease Z [Pseudomonas putida KT2440] gi|41017548|sp|Q88FQ4|RNZ_PSEPK RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|24985732|gb|AAN69625.1|AE016596_3 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 319 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 34/181 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K R ++ I +VD G Sbjct: 1 MDLLFLGT--SAGVPT-------------KARNVSATAVIEASGSHW----YLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 ++L + + A+ TH H DH G+ GL R P++V + + Sbjct: 42 QHRLLHTPLSIRDLRAIFITHVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQ 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 P + V + ++ + H R+ S+GF F Sbjct: 102 ----------GLVASDTFLPFELRLLPVEELIAWRSETLQVTTVQLSH-RVPSVGFVFTE 150 Query: 181 V 181 + Sbjct: 151 I 151 >gi|116492923|ref|YP_804658.1| mRNA degradation ribonuclease J1/J2enzyme [Pediococcus pentosaceus ATCC 25745] gi|116103073|gb|ABJ68216.1| RNase J1 [Pediococcus pentosaceus ATCC 25745] Length = 558 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 50/147 (34%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F Q L I A++ TH H DHI GI FL Q Sbjct: 36 IVVDAGIKFPEDELLGIDYVIPDYQFLVANQQKIKALVITHGHEDHIGGIP-----FLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVI 159 + + +YA+P + L++ +I+ + P S Sbjct: 91 QINVPIYASPLAAALIK-------GKLEEHGLLKTTEIHIIDEDTVIKFPKTSVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP + G I G F+F Sbjct: 144 HSIPDTLGVAVHTPSGVIVETGDFKFD 170 >gi|332111358|gb|EGJ11342.1| cAMP phosphodiesterase [Rubrivivax benzoatilyticus JA2] Length = 261 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 76/212 (35%), Gaps = 32/212 (15%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-----PID 107 + V+VD G L E + ID + +H H DH+ I L + + PI Sbjct: 24 DDDVLVDAGTGVGDLALDE-LARIDDIFVSHSHLDHVLAIALLADSVKRLRADAGRPPIR 82 Query: 108 VYAAPDCMKHLFESFRYCFKA--LDDRTYPPIVNPIVIENNDVPICMKSA---GGVIEAI 162 V+A + + L + F D T P ++ + + A G +E + Sbjct: 83 VHALAETLHALRT---HVFNGVIWPDFTRLPSPERPILCFEPFAVGDRLALSRGRSLEVL 139 Query: 163 PILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDF--LIIDALKNGLHS 215 P + ++GF + AY D PA +L +D LI++ Sbjct: 140 PAAH---TVPAVGFALLDAAGRAWAYSGDTGPVPAL-WRRLAEMDLRGLIVETAFGDDER 195 Query: 216 SHFSLSESL-------KKIELINPKNAILTHM 240 +S L + +L P + +TH+ Sbjct: 196 ELADVSRHLCPTLLRDELAQLRRPVDVYITHI 227 >gi|218782574|ref|YP_002433892.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763958|gb|ACL06424.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 268 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 55/229 (24%) Query: 51 GSNTTVIVDTGPD----FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 T+++VD G R+ SI A+L +H H DH+ G+ + Sbjct: 28 DGTTSILVDAGLSGVQLERRMAERDIDPKSISAILVSHEHTDHVSGVG---VLCRRYG-- 82 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 Y A + S + K + + P + G + P Sbjct: 83 ---YTAYFTRETYKASIKGLGKIEKCKGFVP--------------GQEFTIGGMTIHPFS 125 Query: 166 QQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H ++ GF TD+ A LQ+ + L+++A L +G + Sbjct: 126 TSHDAVNPAGFTIQAHGAKAGIATDLGIATAMVKNHLQDCNVLLMEANHDVQMLLDGPYP 185 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGM 264 H + I ++ H+ D +++ + DG+ Sbjct: 186 WH--------LKQRIKGRSG---HLSNDASRELLEEIL-------HDGL 216 >gi|147838869|emb|CAN70334.1| hypothetical protein VITISV_011432 [Vitis vinifera] Length = 1694 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 32/120 (26%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ +LG G+S P R +S+ I+ S ++++D G Sbjct: 626 REDMEIVLLGTGSSQ----------------PSKYRNVTSIYINLFS----KGSLLLDCG 665 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL----RGYFLKQKRPIDVY 109 Q+ R V + + +H HADH G+ + R KR +D Y Sbjct: 666 EGTLGQLKRRFSVEGADNAVRGLRCIWISHIHADHHAGLARILTLRRDLLKGLKRYLDAY 725 >gi|302340549|ref|YP_003805755.1| hypothetical protein Spirs_4079 [Spirochaeta smaragdinae DSM 11293] gi|301637734|gb|ADK83161.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293] Length = 307 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 61/244 (25%) Query: 51 GSNTTVIVDTGPDFYMQ---VLREQVLS---IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 I+D G +++ + + +H H DHI G F+ Sbjct: 36 DDERLFIIDAGSGIRQLGDYLMKNDLPKGPIRTKIFLSHTHWDHIMGFPFFTPIFIP-GS 94 Query: 105 PIDVYAAPDCMKH------LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +++Y P + + + RY + + + ++ + + G Sbjct: 95 ELEIYG-PVTYEDEGLDRIVGDQLRYRYFPVKHSELAAKITYHPMKERSMEL-----GDG 148 Query: 159 IEAIPILQQHGRISSLGFRF---GNV---AYCTDV--NAFP------------------- 191 + H I LG+RF G V AY T+ N FP Sbjct: 149 LWLTTKYLNH-PILCLGYRFEYKGKVFCTAYDTEPFRNVFPEDPEDPNYDSAAAEEGALA 207 Query: 192 -----AESLEKLQNLDFLIID---ALKNGLHSS----HFSLSESLKKIELINPKNAILTH 239 + L Q D LI D L+ + H S ++ K +L Sbjct: 208 AREENEKILRFFQGADLLIHDSQYTLEEYKNGKIGWGHSSFEYAINAAHKAGVKKLLL-- 265 Query: 240 MHVD 243 H D Sbjct: 266 FHHD 269 >gi|86606689|ref|YP_475452.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] gi|86555231|gb|ABD00189.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-3-3Ab] Length = 588 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 73/219 (33%), Gaps = 32/219 (14%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 RR + + S R +++D G + + DAV+ +H H DH+ G+ Sbjct: 18 RRQGCAYWLEMGSHR-----LLLDCGLPA-SSLFKALPGIPDAVICSHAHFDHLQGL--- 68 Query: 96 RGYFLKQKRPIDVYAAPDCMK---HLFESFRYCFKALDDRTYP----PIVNPIVIENNDV 148 F ++ + +YA P L+E + + R P P I + + Sbjct: 69 -PAFYRRYPQVPIYATPLTAHLAGGLWERGVWPGYDREIRFPPFRALPFGQAREILPHLM 127 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN-----AFPAESLEKLQ--NL 201 + A +LQ + Y D + P L L+ Sbjct: 128 LTFFTAGHLPGAAATLLQNTQTTPA-----QTCVYTGDCSLASTRFAPGLDLTALRHWQP 182 Query: 202 DFLIIDA-LKNGLHSSHFSLSESL--KKIELINPKNAIL 237 D L+I+A L + H L L + + + +L Sbjct: 183 DVLLIEASLGSTRHPPRRHLENRLVERLLGALAAGQTVL 221 >gi|325090794|gb|EGC44104.1| ribonuclease Z [Ajellomyces capsulatus H88] Length = 1123 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 100/321 (31%), Gaps = 96/321 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 603 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 642 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ L+E + + + +H HADH G Sbjct: 643 GQLQRTFAPEELQEVLRDLKVIWISHLHADHHLGTVSVIRAWHKVTHGTQSRTAPPPEQE 702 Query: 92 ------IDGLRGYFLKQKRPID---VYAAPDCMK-----------HLFESFRYCFKALDD 131 ++ R + + + I+ Y++ + + +SF Y D Sbjct: 703 RDLTKLLNEKRLFVVSNAKMIEWLAEYSSVEDYGFDNLLLLAADPTVPDSFHYSHLGSDG 762 Query: 132 RT-----YPPIVNPIVIENNDVPICMKS--AGGVIEAIPILQQHGRIS-SLGFRFG---N 180 ++ P+ + P+ ++ A G+ + + H + S + F F Sbjct: 763 QSLLDDHGKPLTTFASFNPDRSPLALQLQQATGLSTLLTVPVMHCQGSMATSFVFPSGLK 822 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ ++ D ++ D L++ H + E+L+ + + Sbjct: 823 VSYSGDCR--PSRDFARV-GADSTVLIHEATFEDDMLQDAQAKRHSTCGEALRVAKQMRA 879 Query: 233 KNAILTHMHVDLDYDMVLKST 253 +N ILTH + + Sbjct: 880 RNVILTHFSQRYTHKPTIPRL 900 >gi|293374243|ref|ZP_06620571.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325845631|ref|ZP_08168915.1| ribonuclease J 2 [Turicibacter sp. HGF1] gi|292647076|gb|EFF65058.1| conserved hypothetical protein [Turicibacter sanguinis PC909] gi|325488329|gb|EGC90754.1| ribonuclease J 2 [Turicibacter sp. HGF1] Length = 583 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 22/130 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L+E V + + +H H DHI + L + +Y M + +S Sbjct: 76 PDF--TYLKENVSRVQGIFLSHGHEDHIGALPQLLSL-----INVPIYGTRLTMALVEDS 128 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 LD + Y I N+ + G I+ H S+ Sbjct: 129 LSE--NGLDFKNY----KLYKIRENN-----ELFFGDIKVTFFKTTHSIPDSVAICIHTT 177 Query: 179 -GNVAYCTDV 187 G + Y +D Sbjct: 178 DGVIVYTSDF 187 >gi|255325188|ref|ZP_05366294.1| ribonuclease J [Corynebacterium tuberculostearicum SK141] gi|255297753|gb|EET77064.1| ribonuclease J [Corynebacterium tuberculostearicum SK141] Length = 713 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 179 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIHKVKALVVTHAHEDHIGAI----PWL 227 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 228 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVTY------GPF 273 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H +LG GN+ + D+ PA S + +D + Sbjct: 274 RVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLM 333 Query: 205 IID 207 + D Sbjct: 334 LCD 336 >gi|182679874|ref|YP_001834020.1| beta-lactamase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635757|gb|ACB96531.1| beta-lactamase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 279 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADHI 89 SS+ I+ RG V++D G +L V +DA+L TH H DH+ Sbjct: 52 SSIHINCYLVRGGGRAVLIDAGAGGFKQWGGHLKTNLLLAGVQPSEVDAILLTHAHPDHV 111 Query: 90 HGIDGLRG 97 G+ G Sbjct: 112 GGLMDASG 119 >gi|220924020|ref|YP_002499322.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219948627|gb|ACL59019.1| beta-lactamase domain protein [Methylobacterium nodulans ORS 2060] Length = 556 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 65/224 (29%), Gaps = 49/224 (21%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVL--------------SIDAVLYTHPHADHIHGI 92 + ++VD G F + V ++ +L TH H DHI + Sbjct: 27 FGPPTARKWIMVDCGMGFASEEHMPGVDLMYPDLSFIEQQRENLLGILITHGHEDHIGAL 86 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + + VYA + P ++ + N+ Sbjct: 87 VELWP-----RLKVPVYATGFTKSLIETR-------RLGEPGAPKIDLREVRPNE----- 129 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD---------VNAFPAESLEKL- 198 + + G E + H + G V + D N E +L Sbjct: 130 RMSFGPFEVEYVPVAHSIPEANALAIRTAHGLVVHTGDWKLDDAPVVGNVTSEEVFTRLG 189 Query: 199 -QNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILT 238 + + L+ D+ + G S ++ L ++ P +T Sbjct: 190 EEGVLALVCDSTNVTREGRSPSEAEVAAHLAELIRSAPHRVAVT 233 >gi|212223503|ref|YP_002306739.1| hydrolase [Thermococcus onnurineus NA1] gi|212008460|gb|ACJ15842.1| hydrolase [Thermococcus onnurineus NA1] Length = 268 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S + R V+VDTG D M+ R + I+ + TH H DH G+ Sbjct: 24 SALVEHRGVR-----VLVDTGTDGRILLNNMEEFRVKPRKINYIFITHGHYDHTGGL--- 75 Query: 96 RGYFLKQKRPIDVYAAPDCMKH 117 + + + +PI V A P+ + Sbjct: 76 KVFLEARGKPIKVIAHPEIFRR 97 >gi|70726372|ref|YP_253286.1| hypothetical protein SH1371 [Staphylococcus haemolyticus JCSC1435] gi|68447096|dbj|BAE04680.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 208 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 22/146 (15%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +++D PD + L + + A+L TH H DHI +D + K + Sbjct: 19 ENEESVILIDPAGEPDKIFKKLNQINKPLKAILLTHAHFDHIGALDDVV-----NKYEVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPI 164 +Y E F F D+ +I ++ P + IE Sbjct: 74 LYMN-------KEEFS--FLKDPDKNGSAKFKQYGMPLITSDVKPNHLDEGEYNIEGFEF 124 Query: 165 LQQHGRISSLG---FRFGNVAYCTDV 187 H S G + F + A D Sbjct: 125 NVLHTPGHSPGSLTYVFEDFAVVGDT 150 >gi|311739660|ref|ZP_07713495.1| metallo-beta-lactamase superfamily protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311305476|gb|EFQ81544.1| metallo-beta-lactamase superfamily protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 716 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 182 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIHKVKALVVTHAHEDHIGAI----PWL 230 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 231 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVTY------GPF 276 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H +LG GN+ + D+ PA S + +D + Sbjct: 277 RVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLM 336 Query: 205 IID 207 + D Sbjct: 337 LCD 339 >gi|256819577|ref|YP_003140856.1| ribonuclease Z [Capnocytophaga ochracea DSM 7271] gi|256581160|gb|ACU92295.1| Ribonuclease Z [Capnocytophaga ochracea DSM 7271] Length = 304 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P++ S+ + ++D G Sbjct: 1 MEVTILG----------------CHSATPRSNARPSAQLLEMRGHL-----FLIDCGEAT 39 Query: 65 YMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 + LR + I + +H H DH +G+ GL F R + +Y + + Sbjct: 40 QI-ALRNANAKFSRIKHIFISHLHGDHFYGLFGLISTFQLLGREAEMHIYGPKGIKEAV- 97 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y P E + + + I QH R+ + GF F Sbjct: 98 -----LLILKLGGAYTPFP-LHFHELSSKTSELLYEDDKVLVRTIPLQH-RVYTNGFLFQ 150 >gi|213962301|ref|ZP_03390564.1| metallo-beta-lactamase family protein [Capnocytophaga sputigena Capno] gi|213954967|gb|EEB66286.1| metallo-beta-lactamase family protein [Capnocytophaga sputigena Capno] Length = 304 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 37/181 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P++ S+ + ++D G Sbjct: 1 MEVTILG----------------CHSATPRSNARPSAQLLEMRGHL-----FLIDCGEAT 39 Query: 65 YMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 + LR + I + +H H DH +G+ GL F R + +Y + + Sbjct: 40 QI-ALRNANAKFSRIKHIFISHLHGDHFYGLFGLISTFQLLGREAEMHIYGPKGIKEAV- 97 Query: 120 ESFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 Y P + + + + + + ++ IP+ R+ + GF F Sbjct: 98 -----LLVLKLGGAYTPFPLYFHELSSKNSELLYEDDKVLVRTIPLQH---RVYTNGFLF 149 Query: 179 G 179 Sbjct: 150 Q 150 >gi|297583425|ref|YP_003699205.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297141882|gb|ADH98639.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 396 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 12/87 (13%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVL--------SIDAVLYTHPHADHIHGIDGLR 96 S + T++VD G + + E+ +DAV TH H DH G+ Sbjct: 15 SCFIFDLAGRTLMVDCGISKSAETILERYPDFSKRDPAEVDAVFVTHAHEDHTLGL---- 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFR 123 + ++ VYA+ ++H F Sbjct: 71 PFAVRLGLHAPVYASETTIRHTLTYFA 97 >gi|13540924|ref|NP_110612.1| metal-dependent hydrolase [Thermoplasma volcanium GSS1] Length = 257 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 61/222 (27%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ +++D G +E + + ++ +H HADH+ GI ++ K Sbjct: 27 DAHDLIVIDFGITMKK--FKEAISELTLGGLNKSIFISHEHADHVSGIRSVK----KVDG 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 DVY P + + I+N + G E + Sbjct: 81 A-DVYTRPATAEA------------------ANIKAYEIDN-------EVVIGNFEILAF 114 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + F ++ +D+ + +++ D L + LK G + Sbjct: 115 DVPHDAADPVAFTVKWKDLKISVVSDLGTVTENVISNIRDSDILAFESNHDVSMLKTGRY 174 Query: 215 SS-----------HFSLSESLKKIELINPKNA--ILTHMHVD 243 + H S +S + I ++ +LTH+ + Sbjct: 175 PASLKRRILSQHGHLSNEQSAEAISKAINESTEIVLTHLSQE 216 >gi|14324306|dbj|BAB59234.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 260 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 61/222 (27%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++ +++D G +E + + ++ +H HADH+ GI ++ K Sbjct: 30 DAHDLIVIDFGITMKK--FKEAISELTLGGLNKSIFISHEHADHVSGIRSVK----KVDG 83 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 DVY P + + I+N + G E + Sbjct: 84 A-DVYTRPATAEA------------------ANIKAYEIDN-------EVVIGNFEILAF 117 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 H + F ++ +D+ + +++ D L + LK G + Sbjct: 118 DVPHDAADPVAFTVKWKDLKISVVSDLGTVTENVISNIRDSDILAFESNHDVSMLKTGRY 177 Query: 215 SS-----------HFSLSESLKKIELINPKNA--ILTHMHVD 243 + H S +S + I ++ +LTH+ + Sbjct: 178 PASLKRRILSQHGHLSNEQSAEAISKAINESTEIVLTHLSQE 219 >gi|298708432|emb|CBJ48495.1| Zn dependent hydrolase or glyoxylase [Ectocarpus siliculosus] Length = 343 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 10/63 (15%) Query: 54 TTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++DTG P + + +DA+L TH H DH+ G++ +R I Sbjct: 90 RRILIDTGEGKAGFVPHLLDVMRQAGCEMLDAILLTHWHVDHVGGVNDIR---KALGGNI 146 Query: 107 DVY 109 V+ Sbjct: 147 PVF 149 >gi|262384136|ref|ZP_06077272.1| ribonuclease Z [Bacteroides sp. 2_1_33B] gi|262295034|gb|EEY82966.1| ribonuclease Z [Bacteroides sp. 2_1_33B] Length = 304 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 94/317 (29%), Gaps = 99/317 (31%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPH 85 C P R +S + + ++D G +Q+ +R + ++ + +H H Sbjct: 11 CGSALPTTRHLATSQIVDL-----RDKLYMIDCGEGTQVQMRRMRIKFSRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRG----------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DH G+ GL + + I+ Y P + + F + P Sbjct: 66 GDHCFGLPGLISTLGMLGRNGELVIHGPKEIESYMRP-----ILDIF--------CKGLP 112 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----------------- 178 + +I+ + M+ + +IP+ RI G+ F Sbjct: 113 YEIRFNLIDPTTHSLVMEDRSLSVYSIPLKH---RIPCCGYLFAEKAKEAHIIREMTDFY 169 Query: 179 ------------------------------------GNVAYCTDVNAFPAESLEKLQNLD 202 AYC+D AF + ++ +D Sbjct: 170 QVPVRMIQEIKRGADFVTPEGEVIPNARLTRPAVAPKRYAYCSDT-AFHPSIIPIIEGVD 228 Query: 203 FLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L DA + + H + ++ + K ++ H + LK Sbjct: 229 LLYHEATFAECDAARAKE-TFHSTARQAAEIAYKAQVKRLVIGHYSARYEDMAPLKKEAD 287 Query: 256 RVVPAF----DGMQFSS 268 ++ P +GM+ S Sbjct: 288 KIFPGTILGEEGMRLSV 304 >gi|227508147|ref|ZP_03938196.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192376|gb|EEI72443.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 274 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G M+ + + +D +L TH H+DH L +K + Sbjct: 32 PQHKILLDAGLSGKKIANLMRSIGRDINDVDTLLVTHEHSDH-----RQSVGVLARKYDL 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +VYA + + E N P G I+ Sbjct: 87 NVYANQGTWDAMRSRIGKIPEE---------------EINIFPPDTVMDFGDIDIESFSV 131 Query: 167 QH----GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + R + TD +++ D +++ Sbjct: 132 SHDAAEPQFYVFHHRNKSFVVLTDTGYVSDRMEGVIKDADGYLLEC 177 >gi|9758283|dbj|BAB08807.1| unnamed protein product [Arabidopsis thaliana] Length = 528 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 14/153 (9%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-ID 107 + ++ DTG +R I+AV+ TH H DHI + + + P Sbjct: 147 DEPGIQKIMPDTG------FIRRWKHKIEAVVITHGHEDHIGAL----PWVIPALDPNTP 196 Query: 108 VYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++A+ M+ + + F +T+ + PI + + + + Sbjct: 197 IFASSFTMELIKKRLKEHGIFVQSRLKTFSTRRRFMAGPFEIEPITVTHSIPDCSGLFLR 256 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 G I G + A D F E+LE+L Sbjct: 257 CADGNILHTGDWKIDEAPL-DGKVFDREALEEL 288 >gi|89096214|ref|ZP_01169107.1| Zn-dependent hydrolase [Bacillus sp. NRRL B-14911] gi|89089068|gb|EAR68176.1| Zn-dependent hydrolase [Bacillus sp. NRRL B-14911] Length = 555 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 48/143 (33%), Gaps = 30/143 (20%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + +++D G F + L E I ++ TH H DHI GI Sbjct: 25 QSGDDIIVIDCGGKFPDESLMGIDLIIPDISYLEENRSKIKGLIITHGHEDHIGGI---- 80 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 GYFLK+ + VY + + L + I I+++ V Sbjct: 81 GYFLKRVN-VPVYGTRFTLGLIELK-------LTEHGILADTELIQIDSDTV-----LEL 127 Query: 157 GVIEAIPILQQHGRISSLGFRFG 179 G I A H LG F Sbjct: 128 GSIRASFFKVNHSIPDCLGIAFQ 150 >gi|55821233|ref|YP_139675.1| ribonuclease Z [Streptococcus thermophilus LMG 18311] gi|55823145|ref|YP_141586.1| ribonuclease Z [Streptococcus thermophilus CNRZ1066] gi|116627960|ref|YP_820579.1| ribonuclease Z [Streptococcus thermophilus LMD-9] gi|76363383|sp|Q5LZD1|RNZ_STRT1 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|76363384|sp|Q5M3Y3|RNZ_STRT2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|122267444|sp|Q03K89|RNZ_STRTD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|55737218|gb|AAV60860.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55739130|gb|AAV62771.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] gi|116101237|gb|ABJ66383.1| RNAse Z [Streptococcus thermophilus LMD-9] gi|312278548|gb|ADQ63205.1| Ribonuclease Z [Streptococcus thermophilus ND03] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 49/144 (34%), Gaps = 33/144 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MELQFLGTGAGQ----------------PSKARNVSSLVLKLLDE--INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + +++ ++VY Sbjct: 43 QRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYV 102 Query: 115 MKHLF---ESFRY--CFKALDDRT 133 M + Y FK +D+ + Sbjct: 103 MTSIRTSGTRLSYHVHFKEIDENS 126 >gi|313634066|gb|EFS00742.1| metal-dependent beta-lactamase superfamily III protein [Listeria seeligeri FSL N1-067] Length = 243 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 36/217 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRP-- 105 +++D G + I+A + +H H DH+ + +R K+++P Sbjct: 27 DGFKLLIDIGASAVSIMQNYIDPDDINAAIISHYHPDHVADVGILQHIRLLSQKKEKPSV 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y + D+R Y + V + + G + + Sbjct: 87 LPIYGHKE----------------DERGYSYLEMNNVTKAIEYKADDTLEIGPFKVTFLK 130 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------S 215 H + R Y D +A+ + + D L+ D N H Sbjct: 131 TVH-PVVCYAMRIEAAGKVFVYTAD-SAYQDSFIHFSKEADLLVADT--NFFHDLAGKTK 186 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + E K + N K+ +L+H+ D +++ K Sbjct: 187 VHMASVEVAKIAKEANVKSLLLSHLPEVGDLEVLKKE 223 >gi|293365775|ref|ZP_06612481.1| ribonuclease Z [Streptococcus oralis ATCC 35037] gi|307703356|ref|ZP_07640299.1| ribonuclease Z [Streptococcus oralis ATCC 35037] gi|291315708|gb|EFE56155.1| ribonuclease Z [Streptococcus oralis ATCC 35037] gi|307623092|gb|EFO02086.1| ribonuclease Z [Streptococcus oralis ATCC 35037] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P + ++N + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIYFHEFDHNSLGKILETEKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|29832906|ref|NP_827540.1| hypothetical protein SAV_6364 [Streptomyces avermitilis MA-4680] gi|29610027|dbj|BAC74075.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 250 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 82/256 (32%), Gaps = 52/256 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG + P R S S RG V VD G Sbjct: 3 LALTVLGTASPHPAP------------------GRPS---SGYLLRGGGAEVWVDAGFGT 41 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-------RPIDVYAAPDCMK 116 + ++ R + A+ +H HADH L PI +YA C + Sbjct: 42 FAELQRHTDPARLTAIWISHLHADHSA---DLLAAVYGLAYGGLTPPAPIPLYAPRACGQ 98 Query: 117 HLFESFRYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRISS 173 L F + + P+ + + + ++ + ++ IEA + + GR+ Sbjct: 99 RLAGFFGRPNERFLSGVFDFRPLYDGHTVRHWNLRLTARAVAHDIEAYGLRAECQGRV-- 156 Query: 174 LGFRFGNVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHSS----HFSLSESLKKIE 228 +AY D P +L E + D + +A H H + ++ Sbjct: 157 -------LAYSGDSG--PCGTLTELARGADVFLCEA-DIDRHREGEQVHLTPEDAGAAAR 206 Query: 229 LINPKNAILTHMHVDL 244 ++TH+ L Sbjct: 207 EARVGELLVTHVGPTL 222 >gi|115397493|ref|XP_001214338.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192529|gb|EAU34229.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1076 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 93/318 (29%), Gaps = 110/318 (34%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS + ++D G + Sbjct: 579 EIIALGTGSSS----------------PSKYRNVSSTLLHVPG----YGYYLLDCGENTL 618 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + ++ + +H HADH G Sbjct: 619 GQLKRVFEPEQLREVLQNLRMIWISHLHADHHLGTASLIRAWFHENYPDGVPHTTAVETD 678 Query: 92 ----IDGLRGYF------------------LKQKRPID----------VYAAPDCMKHLF 119 ++ R + R I VY +H Sbjct: 679 MAKILNEKRLFVVSEEMMVGWLEEYAGVENYGFGRLIPLSANPDLTNGVYRTELLYRHCR 738 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR------- 170 Y D++ P + + ++++ P+ ++ A G+ + H R Sbjct: 739 ADGSYPGSESDEK---PQITSLRLDDDTSPLTPLLRKATGLSNLLATKVSHCRGAMAVSL 795 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLSES 223 + GF+ ++ D P+ + LI +A + + H +++E+ Sbjct: 796 VFPDGFKI---SFSGDCR--PSPIFAAVGHGSTVLIHEATFQDNMQMSAIAKKHSTVAEA 850 Query: 224 LKKIELINPKNAILTHMH 241 L+ + ++ +LTH Sbjct: 851 LEIGRRMEARSILLTHFS 868 >gi|313498084|gb|ADR59450.1| Ribonuclease Z [Pseudomonas putida BIRD-1] Length = 319 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 34/181 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K R ++ I +VD G Sbjct: 1 MDLLFLGT--SAGVPT-------------KARNVSATAVIEASGSHW----YLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 ++L + + A+ TH H DH G+ GL R P++V + + Sbjct: 42 QHRLLHTPLSIRDLRAIFITHVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQ 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 P + V + ++ + H R+ S+GF F Sbjct: 102 ----------GLVASDTFLPFELRLLPVEELVAWRSETLQVTTVQLSH-RVPSVGFVFTE 150 Query: 181 V 181 + Sbjct: 151 I 151 >gi|325283677|ref|YP_004256218.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324315486|gb|ADY26601.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 313 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 19/175 (10%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M+ + T G P ++ G R R L + V+VD Sbjct: 1 MRVSFQLT----APPSGAPAVSSFGGI-QALRRDLYRVRLPLVNVFLLGEPGGPWVLVDA 55 Query: 61 G-PDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 G P +LR A++ TH H DH+ + L + P+ VYA Sbjct: 56 GMPGTAELILRAAREIHGARPPAAIVMTHGHFDHVGALHDLL-----RHWPVPVYAHELE 110 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + +L Y F +++P + P + + + HG Sbjct: 111 LPYLTGEAAYPFPDPTVGGAMSLLSPAFLPG---PYDFRPQVRRLPEGRLPHVHG 162 >gi|322375537|ref|ZP_08050049.1| ribonuclease Z [Streptococcus sp. C300] gi|321279245|gb|EFX56286.1| ribonuclease Z [Streptococcus sp. C300] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|89900770|ref|YP_523241.1| beta-lactamase-like protein [Rhodoferax ferrireducens T118] gi|89345507|gb|ABD69710.1| beta-lactamase-like [Rhodoferax ferrireducens T118] Length = 295 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 69/237 (29%), Gaps = 64/237 (27%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +N +I+D G Q L ++ V +H H DHI G+ +F I Sbjct: 34 DNNELIILDAGTGIFPLSQTLLAELPVTANVFISHSHWDHIQGL----PFF------IPN 83 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV---------------IENNDVPICMK 153 + + + F + + ++ + +E + Sbjct: 84 FIPGNTL-----RLHGAFDPVSGKGVEQVMAVQLQYSYFPVREAEMKARMEYVTLKPEQS 138 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF---GNVAYCT-------------DVNA------FP 191 G P L H I G+R G + T D + Sbjct: 139 LQIGSATVTPFLMNHPVID-FGYRIEANGKSVFFTGDHEPPLNIYEPGDESYDEYQGFID 197 Query: 192 AES---LEKLQNLDFLIIDALKNG-LHSS-----HFSLSESLKKIELINPKNAILTH 239 ++ L + +D LI D+ + + H + + S+ + K TH Sbjct: 198 EKAHSILRAMHGVDVLIADSSYTEAEYPAKKGWGHGTFNSSMAYAKAAGAKMLFCTH 254 >gi|331270286|ref|YP_004396778.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum BKT015925] gi|329126836|gb|AEB76781.1| Metallo-beta-lactamase superfamily protein [Clostridium botulinum BKT015925] Length = 392 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 75/210 (35%), Gaps = 35/210 (16%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ S ++++D G D + L+ V +D V+ THPH DHI G+D + Sbjct: 61 SILITEGSH-----SMLIDAGNNDDGDMVVSYLKKAGVKKLDYVIGTHPHEDHIGGLDNV 115 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F K +Y ++++ KA+ ++ + I K Sbjct: 116 INTFDINK----IYMPKKV--STTKTYKDVIKAIKNKN-------MKITLPKPGESFKLG 162 Query: 156 GGVIEAIPILQQHGRISSLGFRF--------GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 I Q S+ + + + D E L + D Sbjct: 163 NATCSIIAPKQNQDYESANNYSIVIKLTYGSKSFIFTGDAEGISES--EILSGRYDIKAD 220 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S +E+ + I P+ A++ Sbjct: 221 VLKVGHHGSRTSTTEA--FLNKIAPEFAVI 248 >gi|302338593|ref|YP_003803799.1| metallo-beta-lactamase family protein [Spirochaeta smaragdinae DSM 11293] gi|301635778|gb|ADK81205.1| metallo-beta-lactamase family protein [Spirochaeta smaragdinae DSM 11293] Length = 313 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 73/218 (33%), Gaps = 31/218 (14%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSID--AVLYTHPHADHIHGIDGLRGYF---LKQKR 104 N ++ D G +L ++ ID + ++H H DH+ G+ +F ++ Sbjct: 71 GNDVILFDAGSGMQQFSSMLMKEQEHIDTFHIFFSHFHWDHLQGL----PFFSKLYDRRA 126 Query: 105 PIDVYAAPDCMKHLFES-FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + Y+ + ++ + E R + + ++ I+N + I S P Sbjct: 127 VLHFYSPREDLREIIEGQMRDPYFPIGLDAAAAELHFHTIDNTPLRIGDASVRWKKMRHP 186 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESL-------EKLQNLDFLIIDALK------ 210 R+ R + TD + D +I+D+ Sbjct: 187 GESVSYRVEE---RGKKAIFSTDT-ELSEADFQKTDANRAYFEKADLVIMDSQYTLGEAI 242 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + H S S ++ ++ +L H + +YD Sbjct: 243 EKYNWGHSSYSIAVDFASAWKIRHLVL--FHHEPEYDD 278 >gi|291296201|ref|YP_003507599.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290471160|gb|ADD28579.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 576 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 37/221 (16%) Query: 50 RGSNTTVIVDTG---PDFYMQVLREQVLSIDAVL----------YTHPHADHIHGIDGLR 96 R + I+D G PD M + + ID ++ TH H DHI + Sbjct: 54 RYEDEMFIIDGGLAFPDARMLGVDIVIPRIDYLVQNKDLIRGWVLTHGHEDHIGAL---- 109 Query: 97 GYFLKQKRPIDVYAAPDCMKHLF---ESFR-----YCFKALDDRTYPPIVNPIVIENNDV 148 Y Q + VY A + + E F Y FK + I ++ + Sbjct: 110 PYLFPQLPRVPVYGAKLTLGLVKGKLEEFGLPVGDYNFKEVSPDDRISIGRYFQLDLFRM 169 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + G+I PI GRI G F+ + + + + LI D Sbjct: 170 THSIPDNFGMIIHTPI----GRIVHTGDFKLDERPIDGQTSHLEKIAQAGAEGVLCLIAD 225 Query: 208 AL---KNGLHSSHFSLSESLKKIELINPKNAILT----HMH 241 + + G+ S ++E L K+ +T H+H Sbjct: 226 STNGERPGVTPSESEVAEELDKVIGAAKGRIFVTTFASHIH 266 >gi|118575218|ref|YP_874961.1| hydrolase of the metallo-beta-lactamase superfamily [Cenarchaeum symbiosum A] gi|118193739|gb|ABK76657.1| hydrolase of the metallo-beta-lactamase superfamily [Cenarchaeum symbiosum A] Length = 496 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 37/172 (21%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-------YC- 125 S+DAVL +H H DH I LR I VY K + + F Y Sbjct: 87 TSVDAVLLSHAHVDHCAYIKYLRP-------EIPVYCTEAT-KMILQVFDDAGMGEEYIT 138 Query: 126 ------FKALDDRTYPPIVNPIVIENNDVPIC---MKSAGGVIEAIPILQQHGRISSLGF 176 F + I + D+ + K G IE PI H + GF Sbjct: 139 YKRNFGFHKKNGVGIKTIGKKRETKPRDIRLIKNLEKFKVGNIEVEPIAIDHSLPGACGF 198 Query: 177 RF----GNVAYCTDVN---AFPAESLEKL-----QNLDFLIIDALKNGLHSS 216 G + Y D+ P +S + + + D L+ + + + S Sbjct: 199 LMHTSSGTLGYTADIRFHGRHPDDSQKFVDRCGSEKPDCLLCEGTRIDVPKS 250 >gi|227515446|ref|ZP_03945495.1| metallo-beta-lactamase [Lactobacillus fermentum ATCC 14931] gi|227086205|gb|EEI21517.1| metallo-beta-lactamase [Lactobacillus fermentum ATCC 14931] Length = 628 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L E I + TH H DHI G+ F Q Sbjct: 54 VIIDCGVLFPEDELLGVNYVIQNYDYLVENKEKIKGIFITHGHEDHIGGLP-----FFLQ 108 Query: 103 KRPIDVYAAPDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + +YA P + + ++ + + + Sbjct: 109 KVNVPIYAGPFATSLIKGKLDEKHLLRSTELHEIDEFSEVHFKKLWVSFFRTTHSIPDTV 168 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V PA + +++ L Sbjct: 169 GVAVHTPQGTIIQTGDFKFD----LTPVGNLPAPNFQQMAKL 206 >gi|170289661|ref|YP_001736477.1| RNA processing exonuclease [Candidatus Korarchaeum cryptofilum OPF8] gi|170173741|gb|ACB06794.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Candidatus Korarchaeum cryptofilum OPF8] Length = 424 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 18/155 (11%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH----LFESFRYCFKALD 130 +DAVL TH H DH + L + +YA + L++S + Sbjct: 53 EVDAVLLTHAHLDHSGALPRLVS----HGMEVPIYALDITKYYTELLLYDSIKVAKLKGH 108 Query: 131 DRTYPPIVNPIVIENND-VPICMKSAGGVIEAIPILQQH---GRISSLGFRFGNVAYCTD 186 + Y +EN + + G +E I H + + + ++ Y D Sbjct: 109 NLGYGARDVNKTLENFRTIDFNIPFKVGDLEVTAIDAGHIPGSAMFHISYDGTSLLYTGD 168 Query: 187 VNA-----FPAESLEKLQNLDFLIIDAL-KNGLHS 215 N P +E + +D LI + H Sbjct: 169 FNTVESRLMPPARIEDVPKVDILITETTYAKKEHP 203 >gi|227879010|ref|ZP_03996906.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus crispatus JV-V01] gi|227861399|gb|EEJ69022.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus crispatus JV-V01] Length = 240 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 46/211 (21%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + ID +H H DH G+ G +++ ID +A ++L ++ Sbjct: 20 DINEIDMAFLSHDHTDHSGGL----GVLMRRYPKIDAFANSGTWQYLLDT--------KK 67 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 P IE G ++ H + F VA+ TD Sbjct: 68 IGKLPAEQMNTIEPGQTK-----TFGDVDITAFATSHDAAEPQYYVFTSGGKRVAFLTDT 122 Query: 188 NAFPAESLEKLQNLDFLIID------ALKNGLHS-----------SHFSLSESL-KKIEL 229 E +++ D +++ L++G +S H S E+ +++ Sbjct: 123 GYVSEEVEGTIEDADAYMMEFNYDNMMLRDGPYSWALKQRILSDVGHLSNDEAAQALVDV 182 Query: 230 INP--KNAILTHMHVD-----LDYDMVLKST 253 + P K+ L H L ++ + Sbjct: 183 VTPKTKHIFLAHRSQHNNTEYLAHETAKEML 213 >gi|303275824|ref|XP_003057206.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461558|gb|EEH58851.1| predicted protein [Micromonas pusilla CCMP1545] Length = 813 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 29/142 (20%) Query: 52 SNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 N V++D G F + R + I+AVL TH H DHI + Sbjct: 169 ENRYVLLDAGLMFPDHEELGIQKVLPDVSFLSRWK-DKIEAVLITHGHEDHIGAL----P 223 Query: 98 YFLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + P VYA M+ + + F D + + V + + Sbjct: 224 WVIPALDPSTPVYAGLFTMQLIARRMK-EFNLWGDGS--------RFKVIGVGDGSRFSA 274 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 G E + H G F Sbjct: 275 GPFEMEAVRVTHSIPDCCGLIF 296 >gi|226226943|ref|YP_002761049.1| hypothetical protein GAU_1537 [Gemmatimonas aurantiaca T-27] gi|226090134|dbj|BAH38579.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 280 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 72/231 (31%), Gaps = 74/231 (32%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG G+ R + + + GS +V+VD G Sbjct: 3 RITVLGSGS----------------------RGNA-ILV-----DGSEGSVLVDAGFSAR 34 Query: 66 MQVLR-----EQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPDCMKH 117 R Q SI+A+L TH H DH G G+ V A+ + Sbjct: 35 TIAQRLLAVERQPESINALLLTHEHVDHASGATASCSRWGW--------PVVASQGTLAA 86 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL--- 174 L + + P V + N + AG +E + +L Sbjct: 87 LADM----------ASGAPAVTQALAANAPTQV----AGFSVEHHAVPHDAADCRALVLT 132 Query: 175 ----GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 G R G V D P L +LD L+I+A L NG + Sbjct: 133 DTRSGARVGVVL---DAGHVPDTLPAFLAHLDLLVIEANHDTTMLANGPYP 180 >gi|222085592|ref|YP_002544122.1| metallo-beta-lactamase family protein [Agrobacterium radiobacter K84] gi|221723040|gb|ACM26196.1| metallo-beta-lactamase family protein [Agrobacterium radiobacter K84] Length = 557 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 46/215 (21%) Query: 54 TTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G PD L ++ ++ ++ TH H DH + L Sbjct: 34 QWIMVDCGVTFPGPDLPGVDLVLPDIR--FLAKERKNLKGIIITHAHEDHYGALSDLWP- 90 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRY------CFKALDDRTYPPIVNPIVIENNDVPICM 152 + VYA+ L Y V P IE V + Sbjct: 91 ----GLNVPVYASGFTAGLLEAKRDYEKTMGQIPITPFKAGDRINVGPFSIEGVAVNHSI 146 Query: 153 KSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQNLDFLII-- 206 ++ P+ G + G ++ ++ TD +L + L + Sbjct: 147 PEPMSLMIRTPV----GNVIHTGDWKIDHEPSLGPLTD-----EARFRQLGDEGVLALMC 197 Query: 207 ---DALKNGLHSSHFSLSESLKKIELINPKNAILT 238 +AL++G+ S +S SL+KI +T Sbjct: 198 DSTNALRDGVSPSEKDVSASLRKIIENAEGRVAIT 232 >gi|194397004|ref|YP_002037330.1| ribonuclease Z [Streptococcus pneumoniae G54] gi|254808669|sp|B5E2R6|RNZ_STRP4 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|194356671|gb|ACF55119.1| ribonuclease Z [Streptococcus pneumoniae G54] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 82/295 (27%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVIE------- 160 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 161 ---------AIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G Y + D Sbjct: 163 LDAKKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHIS 276 >gi|325122827|gb|ADY82350.1| ribonuclease Z [Acinetobacter calcoaceticus PHEA-2] Length = 318 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 21/90 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 HFT LG S GVP ++ S V + ++VD G Sbjct: 2 LHFTFLGT--SSGVPTLS---------------RNVSGL--AVRNSKNKNWILVDAGEGT 42 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +Q + + ++ A+ TH H DH +G+ Sbjct: 43 QHRIQQAKLSLQNLVAICITHVHGDHCYGL 72 >gi|184156025|ref|YP_001844365.1| hypothetical protein LAF_1549 [Lactobacillus fermentum IFO 3956] gi|260662718|ref|ZP_05863612.1| beta-lactamase domain-containing protein [Lactobacillus fermentum 28-3-CHN] gi|183227369|dbj|BAG27885.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552799|gb|EEX25798.1| beta-lactamase domain-containing protein [Lactobacillus fermentum 28-3-CHN] gi|299783546|gb|ADJ41544.1| Beta-lactamase domain-containing protein [Lactobacillus fermentum CECT 5716] Length = 610 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L E I + TH H DHI G+ F Q Sbjct: 36 VIIDCGVLFPEDELLGVNYVIQNYDYLVENKEKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + +YA P + + ++ + + + Sbjct: 91 KVNVPIYAGPFATSLIKGKLDEKHLLRSTELHEIDEFSEVHFKKLWVSFFRTTHSIPDTV 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V PA + +++ L Sbjct: 151 GVAVHTPQGTIIQTGDFKFD----LTPVGNLPAPNFQQMAKL 188 >gi|260061316|ref|YP_003194396.1| pyrroloquinoline quinone biosynthesis protein PqqB [Robiginitalea biformata HTCC2501] gi|88785448|gb|EAR16617.1| pyrroloquinoline quinone biosynthesis protein PqqB [Robiginitalea biformata HTCC2501] Length = 315 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 85/278 (30%), Gaps = 67/278 (24%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G P I C P P R SL IS + S + + PD Sbjct: 32 LVVLGTVQDGGSPHIGCARSCCAPLQKTPDPGRMVVSLGIS---DARSGKRYLFEATPDI 88 Query: 65 YMQVLREQVLSI---------DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q+ + + D + TH H H G+ L L ++ + V+A P Sbjct: 89 SRQL--HDLGRVGRGEPDAVPDGIFLTHAHIGHYTGLMFLGKEALGARQ-VPVFAMPRMR 145 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-MKSAGGVIEAIPILQQHGRI--S 172 L ++ + +V I + + + G +E P+ H Sbjct: 146 SFLE----------ENGPWSQLVASGNIRLEPLRAGAVVTLGESLEVTPLQVPHRDEYSE 195 Query: 173 SLGFRF----GNVAYCTDVNAFPAESLE-----KLQNLDFLIIDALKNG----------- 212 ++GF V + D++ + E E L +D +DA Sbjct: 196 TVGFLIRGPRQKVLFIPDIDKW--ERWETPIERLLSEVDVAFVDATFYDAAEIGYRDISQ 253 Query: 213 -LHSSHF-------SLSESLKKIELINPKNAILTHMHV 242 H +L +++ + H++ Sbjct: 254 IPHPFVSESRGRWDNLPAAMR-------RKVHFIHLNH 284 >gi|65318978|ref|ZP_00391937.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacillus anthracis str. A2012] Length = 542 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 22 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 77 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI + + G Sbjct: 78 FLKQLN-VPIYATRLTLGLIE-------IKLKEHNLQNDTELIVIHSES-----EIDFGS 124 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 125 IKTTFFXTNHSIPDCLGIAFHTPEGTVVHTGDFK 158 >gi|325973334|ref|YP_004250398.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis str. Illinois] gi|325989769|ref|YP_004249468.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis KI3806] gi|323574854|emb|CBZ40514.1| Metallo-beta-lactamase superfamily protein [Mycoplasma suis] gi|323651936|gb|ADX98018.1| metallo-beta-lactamase superfamily protein [Mycoplasma suis str. Illinois] Length = 616 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 35/188 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYCFK 127 L E I +L TH H DHI G+ L I +YA M+ + K Sbjct: 74 LIENQKKIFGLLITHGHEDHIGGVPHLV-----NSLDIPVIYAPALAMELIK-------K 121 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAY 183 L++ I +E D + + + P+ H S GF G V + Sbjct: 122 KLEENK---IERLPKLEVYDPDTIIFTKHFAFDVFPV--NHSIPDSFGFAISTPNGVVVF 176 Query: 184 CTDV-----NAFPAESLEKL-----QNLDFLIID---ALKNGLHSSHFSLSESLKKIELI 230 D N +++ ++L + +D L+ + A + G + S ++ + LK I Sbjct: 177 SGDFRFDLKNKIDSKAFQRLISIGGRQVDLLLCESTAAAQPGFNESEATIIQELKNIISS 236 Query: 231 NPKNAILT 238 + I+T Sbjct: 237 SEGRIIIT 244 >gi|238852960|ref|ZP_04643359.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri 202-4] gi|238834410|gb|EEQ26648.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri 202-4] Length = 265 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 53/252 (21%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I + +++D G + QV + ID V +H H DH G+ Sbjct: 14 STLIETPQHK-----ILMDAGLSGKKTKELLAQV-GVDIKDIDMVFISHDHTDHSGGL-- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES + I V + N + Sbjct: 66 --GVLMRRYPKISAYANSGTWNYLIESNK-------------IGKLPVEQINTFESGITK 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--- 207 G ++ H + F A TD + ++++ D +++ Sbjct: 111 TFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEIKDADGYLMEFNY 170 Query: 208 ---ALKNGLHS-----------SHFSLSESLK-KIELINP--KNAILTHMHVDLDYDMVL 250 L+NG +S H S ++ +++++P K+ L H + + Sbjct: 171 DDMMLRNGPYSWSLKHRIMSDVGHLSNDQAADTLLDVVSPKTKHIFLAHRSQHNNTQYLA 230 Query: 251 KSTPSRVVPAFD 262 T ++ A D Sbjct: 231 HETAEDLLVAGD 242 >gi|146283279|ref|YP_001173432.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501] gi|145571484|gb|ABP80590.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri A1501] Length = 337 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 55/176 (31%), Gaps = 34/176 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG S G P R S + E ++D G Sbjct: 5 LLFLGT--SSGTPT---------------RARNVSAL--ALLEETGKAWYLIDCGEGTQH 45 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESF 122 ++LR + + A+ TH H DH +G+ GL R P+ + A + + Sbjct: 46 RLLRTPLSLHDLRAICITHVHGDHCYGLPGLLASAGMMGRKAPLTIIAPQGIETWVRATL 105 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + ++ +E D +S IEA + R+ G+ F Sbjct: 106 S-----MSQSWLSYELDFHAVETLDEW---RSPNMRIEATELSH---RVPCYGYSF 150 >gi|331092572|ref|ZP_08341392.1| ribonuclease Z [Lachnospiraceae bacterium 2_1_46FAA] gi|330400622|gb|EGG80232.1| ribonuclease Z [Lachnospiraceae bacterium 2_1_46FAA] Length = 303 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 88/271 (32%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++++D G + ++E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTSLMTRFNGSSLLIDCGEGTQI-AIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 ++ P+ + + L + +P +N + IE + + Sbjct: 78 GNADRREPLTLIGPKGLERVVTALR-------VIAPELPFP--INYVEIEGAEQTFELNG 128 Query: 155 AGGVIEAIPILQQHGRISSLGF-----RFGNVAYCTDVN-----AFPAESLEKLQNLDF- 203 H + G+ R G DV P + + LQ + Sbjct: 129 Y----RLTAFRVNH-NVLCYGYTLEIDRAGKF----DVKRAMEQEIPKQYWKFLQRGETI 179 Query: 204 ----------LIIDALKNG----------------LH----------------------- 214 +++ A + G H Sbjct: 180 REDGKIYTPDMVLGAQRKGIKLTYTTDTRPTESIKTHAAKSDLFICEGMYGEKEKAEKAV 239 Query: 215 -SSHFSLSESLKKIELINPKNAILTHMHVDL 244 H + +E+ K + + K LTH L Sbjct: 240 EYKHMTFTEAGKLAKEADVKEMWLTHYSPSL 270 >gi|309799961|ref|ZP_07694162.1| ribonuclease Z [Streptococcus infantis SK1302] gi|308116408|gb|EFO53883.1| ribonuclease Z [Streptococcus infantis SK1302] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + I + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKISKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYKIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|300712088|ref|YP_003737902.1| hypothetical protein HacjB3_13645 [Halalkalicoccus jeotgali B3] gi|299125771|gb|ADJ16110.1| hypothetical protein HacjB3_13645 [Halalkalicoccus jeotgali B3] Length = 638 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 55/159 (34%), Gaps = 28/159 (17%) Query: 52 SNTTVIVDTGPDF------YMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++T +++D G Y+Q L SIDAV+ TH H DH L K Sbjct: 203 ADTRILIDCGDKPGSDDVPYLQVPEALGSGANSIDAVVLTHAHLDHSA----LLPLLFKY 258 Query: 103 KRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + Y A + PP + +V E I ++ G + Sbjct: 259 GYDGPIYTTEPTRDLMGLLQLDYLDVAAKEGRTPPYASEMVRETIKHTIPIEY--GDVTD 316 Query: 162 IPILQ---QHGRISSLG-----FRFG----NVAYCTDVN 188 I H LG F G NVA+ D++ Sbjct: 317 IAPDVKLTMHNAGHILGSAVSHFHIGNGMYNVAFSGDIH 355 >gi|163785109|ref|ZP_02179816.1| metal dependent phosphohydrolase [Hydrogenivirga sp. 128-5-R1-1] gi|159879620|gb|EDP73417.1| metal dependent phosphohydrolase [Hydrogenivirga sp. 128-5-R1-1] Length = 246 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 18/192 (9%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAA 111 N + +D G L+E+ + +L TH H DHI I L L + ++++ Sbjct: 19 NDCICIDAGNILKP--LKEKATDLKHILLTHSHLDHILDIPFLSDITLNFREFSLNIWGL 76 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIV--NPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + L D + + + + N + + + I+ + H Sbjct: 77 EETINDLKNYIMNWHIWPDFSSIKLVRKKDNPALHYNFINYNEELSLENIKFKTVKSNHS 136 Query: 170 RISSLGFRFGNVAYCT-DVNAFPAESLEKLQNLDF--LIIDAL---------KNGLHSSH 217 + ++G+ + + + D E NL L ID K+ H S Sbjct: 137 -VPTVGYVINDKIFISGDTINNEELIKEVNNNLKIEKLFIDVSFPSYLDKIAKDSKHHST 195 Query: 218 FSLSESLKKIEL 229 + E +KKI Sbjct: 196 LTFKEEIKKIRK 207 >gi|18978394|ref|NP_579751.1| hypothetical protein PF2022 [Pyrococcus furiosus DSM 3638] gi|18894232|gb|AAL82146.1| hypothetical protein PF2022 [Pyrococcus furiosus DSM 3638] Length = 249 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S + + V+VDTG D + + SIDA+ TH H DH GI L Sbjct: 6 SALVEH-----NGYRVLVDTGTDGKILLNNMEGLGIDPNSIDALFLTHGHYDHTGGIAEL 60 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 +K +DVYA P + Sbjct: 61 L---KARKDTLDVYAHPRIFE 78 >gi|117926494|ref|YP_867111.1| beta-lactamase domain-containing protein [Magnetococcus sp. MC-1] gi|117610250|gb|ABK45705.1| beta-lactamase domain protein [Magnetococcus sp. MC-1] Length = 295 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 52/231 (22%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--- 105 + +I+D G Q L Q+ + TH H DHI G+ +F+ Q P Sbjct: 34 DDDALIIIDGGTGIFPLAQTLLGQMPLTAHIFITHTHWDHIQGL----PFFIPQYIPANR 89 Query: 106 IDVYAAP------DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + ++ A D + L ++YC+ + + + + ++ V G Sbjct: 90 LVLHGAHDPVEQRDLREILTYQYQYCYFPVREVELKANLEYVTLKEYQV-----IQVGDA 144 Query: 160 EAIPILQQHGRISSLGFRFGNVA---------------YCTDVNAFPAES---------- 194 I H ++ LG+R Y D + S Sbjct: 145 TVSCIYMNHPVLN-LGYRVNCNGKSVFFTGDHEPITNIYADDHHYHDEYSRFIEAKDKAI 203 Query: 195 LEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 L+ + +D LI D + H + S+ + K TH Sbjct: 204 LDFIDQVDVLIADTSYTAAEYAMKKGWGHGTYDTSVALAKACRAKKLFFTH 254 >gi|281205855|gb|EFA80044.1| hypothetical protein PPL_06865 [Polysphondylium pallidum PN500] Length = 951 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 66/215 (30%), Gaps = 32/215 (14%) Query: 52 SNTTVIVDTGPDFYMQVLR----EQVLSI----DAVLYTHPHADHIHGIDGLRGYFLKQK 103 + T++++D G Y Q+ R E + I + +H HADH GI + + Sbjct: 531 NGTSMLLDAGEGTYGQLARFFGHENIAKILINLKVIWISHVHADHHLGIPRILEKRARAF 590 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI----VNPIVIENNDVPICMKSAGGVI 159 + + P + F R PI V I+N+ I G++ Sbjct: 591 EELGIKEDPVVIIGPHTL---IFWLKLLRRMTPIDFEGVEFEQIQNSKPAIAALQKLGIV 647 Query: 160 EAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLII-------- 206 + H + G Y D ++ D + Sbjct: 648 SLESVPVIHCTNAC-GVVIELENGVKFTYSGDTRPCSDLAVA---GQDSTFLLHEATFGD 703 Query: 207 DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D H ++ E+L + K +LTH Sbjct: 704 DMQNEAKAKKHSTIGEALDIGRQMRAKFTLLTHFS 738 >gi|307108225|gb|EFN56466.1| hypothetical protein CHLNCDRAFT_145133 [Chlorella variabilis] Length = 695 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 36/240 (15%) Query: 53 NTTVIVDTGPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++++D G + R QV S+ + +H HADH+ G+ L + Sbjct: 396 GQSLLLDCGEGALGALRRAHGAAAAMRQVASLGCLWVSHRHADHMSGVASLLAAYPASLP 455 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ V L E+ + + ++ ++ G+ + Sbjct: 456 PLLVVGPRSLRDWLAEAAP-ALRLAGRYRFVHCAELNRPDHWARQ-ALRRHLGITHLQCV 513 Query: 165 LQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNG 212 +H + G ++ Y D P + L + + LI +A + Sbjct: 514 PVRHCS-DAYGLVLQHEQGWSLVYSGDTQ--PCQQLVQAGRGCTLLIHEATFEPCLEQQA 570 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD---------MVLKSTPSRVVPAFDG 263 H + +E+L+ + + ILTH +P DG Sbjct: 571 RQKRHSTTAEALEVAQRMGAYRCILTHFSQRYPKWPQGLDQLQADEEARSPEGAEL--DG 628 >gi|148997244|ref|ZP_01824898.1| ribonuclease Z [Streptococcus pneumoniae SP11-BS70] gi|168575344|ref|ZP_02721280.1| ribonuclease Z [Streptococcus pneumoniae MLV-016] gi|307067292|ref|YP_003876258.1| metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus pneumoniae AP200] gi|147756944|gb|EDK63984.1| ribonuclease Z [Streptococcus pneumoniae SP11-BS70] gi|183578418|gb|EDT98946.1| ribonuclease Z [Streptococcus pneumoniae MLV-016] gi|306408829|gb|ADM84256.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus pneumoniae AP200] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 82/295 (27%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVIE------- 160 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 161 ---------AIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNIQAAQVAVEAGAKRLLLNHIS 276 >gi|331233575|ref|XP_003329448.1| hypothetical protein PGTG_11198 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308438|gb|EFP85029.1| hypothetical protein PGTG_11198 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 854 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 88/273 (32%), Gaps = 59/273 (21%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT-VIVDTG 61 D T LG G++ P R SS + G V++D G Sbjct: 490 DGIIVTTLGTGSAA----------------PSKYRNVSSTLLHIPDGHGQKFNFVLLDAG 533 Query: 62 PDFYMQVLR-------EQVLSIDAVLYTHPHADHIHG----------IDGLRGYFLKQKR 104 Q+ R + + ++ + +H HADH G +D L + Sbjct: 534 EGTMGQIKRKFGLGWKDTLRNLKMIFISHLHADHHCGLASLLAERSQLDNCAPLALLCQY 593 Query: 105 PIDVYAAPD-CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +Y + ++ L S + + + + + + S E Sbjct: 594 GIYLYLSEKAVIEPLGLSIGRV-QWFNSEHLLQSSDKRLATIRRIQALISSG---FEIET 649 Query: 164 ILQQH-GRISSLGFRFG------NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNGLHS 215 IL H G+ G + + D P ++ Q+ D LI +A G Sbjct: 650 ILVNHWGK--CFGVCIEQKTERWKIVFSGDTR--PCQALIDAGQHADVLIHEAS-LGPEE 704 Query: 216 S-------HFSLSESLKKIELINPKNAILTHMH 241 + H ++ ++++ +N KN +L H Sbjct: 705 TELADTKGHSTIDQAIQAALKMNAKNCVLNHFS 737 >gi|308503394|ref|XP_003113881.1| hypothetical protein CRE_26060 [Caenorhabditis remanei] gi|308263840|gb|EFP07793.1| hypothetical protein CRE_26060 [Caenorhabditis remanei] Length = 326 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 8/98 (8%) Query: 56 VIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++DTG VL I ++ TH H DH+ GID + + K+ I + Sbjct: 79 ILIDTGEPNISEYISALKSVLSSTNSQIAYIVITHWHGDHVGGIDNITEE-ILDKKKIPI 137 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 Y E F Y + R + I + Sbjct: 138 YKMQRDKDEGVERFTYVNDGHEVRVDGATLKFIATPGH 175 >gi|153952511|ref|YP_001398989.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939957|gb|ABS44698.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 662 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 25/155 (16%) Query: 52 SNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F + R+ I ++ TH H DHI + Y Sbjct: 135 NKDAIIIDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAV----PY 190 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 F K+ + +YA P + + F + + + P+ V E + I + + Sbjct: 191 FFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRRVYEIGEFDIEWIHITHS 249 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 A+ I + G I G F+ Y TD Sbjct: 250 IIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|194364629|ref|YP_002027239.1| beta-lactamase domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194347433|gb|ACF50556.1| beta-lactamase domain protein [Stenotrophomonas maltophilia R551-3] Length = 255 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 61/194 (31%), Gaps = 14/194 (7%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP- 105 V ER + +D G + A+ TH H DH+ G + L + Sbjct: 24 VIERDGRPWLTIDCGGEGLTAFKAHYGHMPQALFVTHVHLDHVAGFERLFVDTFFSGQRR 83 Query: 106 --IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y + L + L + +I + G +E P Sbjct: 84 GKVRLYVPAPVVPLLHKRIGDYPNVLAEGGANFWDAFQLIVVGEAFWH---EGVRLEVFP 140 Query: 164 ILQQHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSL 220 + H ++ G R G +A+ D P + + + D GLH SH + Sbjct: 141 VR-HHWPETAYGLRLQGALAWSGDTRPIPEMLARYAGDNELIAHDC---GLHGNPSHTGV 196 Query: 221 SE-SLKKIELINPK 233 + + + + Sbjct: 197 EDLEREYSAELQAR 210 >gi|325678959|ref|ZP_08158557.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] gi|324109463|gb|EGC03681.1| metallo-beta-lactamase domain protein [Ruminococcus albus 8] Length = 261 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 37/181 (20%) Query: 51 GSNTTVIVDTG---PDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 N+ +++D G + + S + A+ TH H+DHI G+ L +K Sbjct: 20 DENSGILIDAGVSCKRIVTSLADRGIESKAVQAIFITHTHSDHITGLK-----VLSKKLG 74 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VY+ ++ + A D +IE ND P+ + G E Sbjct: 75 VPVYSLRGNLE-ILARNDKVSAASD-----------LIEMNDRPVQV----GGFEVTAFD 118 Query: 166 QQHGRISSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S GFR N A CTD+ A+ +L +++++ LKN + Sbjct: 119 TPHDTPVSCGFRATAPDGKNCAVCTDLGHVTADIHAELAKCRLVLLESNYDPKMLKNSPY 178 Query: 215 S 215 Sbjct: 179 P 179 >gi|283956166|ref|ZP_06373651.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792320|gb|EFC31104.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 1336] Length = 662 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 25/155 (16%) Query: 52 SNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F + R+ I ++ TH H DHI + Y Sbjct: 135 NKDAIIIDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAV----PY 190 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 F K+ + +YA P + + F + + + P+ V E + I + + Sbjct: 191 FFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKWFRPVEKRRVYEIGEFDIEWIHITHS 249 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 A+ I + G I G F+ Y TD Sbjct: 250 IIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|68536205|ref|YP_250910.1| hypothetical protein jk1128 [Corynebacterium jeikeium K411] gi|68263804|emb|CAI37292.1| conserved hypothetical protein [Corynebacterium jeikeium K411] Length = 698 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 35/139 (25%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF L ++ ++A++ TH H DHI I Sbjct: 158 EGRLLIIDCGVLFPSSGEPGVDLILPDF--SYLEDKWDRVEALVITHGHEDHIGAI---- 211 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + LKQ+ I + A+ + K + R P ++ +V + Sbjct: 212 PWLLKQRADIPIIASRFTCALISA------KTQEHRQRPKLI--------EVDENSHESR 257 Query: 157 GVIEAIPILQQHGRISSLG 175 G + H LG Sbjct: 258 GPFDLRFFAVNHSIPDCLG 276 >gi|329904397|ref|ZP_08273791.1| Putative Metallo-beta-lactamase family protein [Oxalobacteraceae bacterium IMCC9480] gi|327548001|gb|EGF32740.1| Putative Metallo-beta-lactamase family protein [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 57/179 (31%), Gaps = 38/179 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLR 96 + + + TTV++D G ++ R + + A++ TH H+DH+ G Sbjct: 14 ALLITAASGMTRTTVMLDCGFSVKETERRMARIGMAAAELSAIVITHEHSDHVSG----- 68 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-- 154 ++ + V+ + + + + DV C Sbjct: 69 ALKFARRYHVPVWLSYGTFQAVQGDCK---------------------GVDVRFCRDGIA 107 Query: 155 -AGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G +E +P H + + + + TD + L D L+++ Sbjct: 108 IPIGDLELMPYTVPHDAREPVQYVASDGRMRLGVLTDAGHSTPHLVGALDGCDALVLEC 166 >gi|228964695|ref|ZP_04125802.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794945|gb|EEM42444.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] Length = 357 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 42/158 (26%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 36 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG-- 156 FLKQ + +YA + + + ++N+ I + S Sbjct: 92 FLKQLN-VPIYATKLTLGLIEIK----------------LKEHNLQNDTELIVIHSESEI 134 Query: 157 --GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I+A H LG F G V + D Sbjct: 135 DCGSIKATFFKTNHSIPDCLGIVFHTPEGTVVHTGDFK 172 >gi|148985257|ref|ZP_01818480.1| ribonuclease Z [Streptococcus pneumoniae SP3-BS71] gi|148989046|ref|ZP_01820446.1| ribonuclease Z [Streptococcus pneumoniae SP6-BS73] gi|149005791|ref|ZP_01829530.1| ribonuclease Z [Streptococcus pneumoniae SP18-BS74] gi|149010703|ref|ZP_01832074.1| ribonuclease Z [Streptococcus pneumoniae SP19-BS75] gi|149020288|ref|ZP_01835180.1| ribonuclease Z [Streptococcus pneumoniae SP23-BS72] gi|168482902|ref|ZP_02707854.1| ribonuclease Z [Streptococcus pneumoniae CDC1873-00] gi|168487234|ref|ZP_02711742.1| ribonuclease Z [Streptococcus pneumoniae CDC1087-00] gi|168492251|ref|ZP_02716394.1| ribonuclease Z [Streptococcus pneumoniae CDC0288-04] gi|169833589|ref|YP_001694147.1| ribonuclease Z [Streptococcus pneumoniae Hungary19A-6] gi|182683601|ref|YP_001835348.1| ribonuclease Z [Streptococcus pneumoniae CGSP14] gi|225856367|ref|YP_002737878.1| ribonuclease Z [Streptococcus pneumoniae P1031] gi|225858502|ref|YP_002740012.1| ribonuclease Z [Streptococcus pneumoniae 70585] gi|225860665|ref|YP_002742174.1| ribonuclease Z [Streptococcus pneumoniae Taiwan19F-14] gi|237650305|ref|ZP_04524557.1| ribonuclease Z [Streptococcus pneumoniae CCRI 1974] gi|237821977|ref|ZP_04597822.1| ribonuclease Z [Streptococcus pneumoniae CCRI 1974M2] gi|298229814|ref|ZP_06963495.1| ribonuclease Z [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254806|ref|ZP_06978392.1| ribonuclease Z [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502468|ref|YP_003724408.1| ribonuclease Z [Streptococcus pneumoniae TCH8431/19A] gi|303254744|ref|ZP_07340845.1| ribonuclease Z [Streptococcus pneumoniae BS455] gi|303259945|ref|ZP_07345919.1| ribonuclease Z [Streptococcus pneumoniae SP-BS293] gi|303261351|ref|ZP_07347299.1| ribonuclease Z [Streptococcus pneumoniae SP14-BS292] gi|303264017|ref|ZP_07349938.1| ribonuclease Z [Streptococcus pneumoniae BS397] gi|303266331|ref|ZP_07352221.1| ribonuclease Z [Streptococcus pneumoniae BS457] gi|303268798|ref|ZP_07354586.1| ribonuclease Z [Streptococcus pneumoniae BS458] gi|307126870|ref|YP_003878901.1| ribonuclease Z [Streptococcus pneumoniae 670-6B] gi|254808670|sp|C1C636|RNZ_STRP7 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808671|sp|B1IAL2|RNZ_STRPI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808676|sp|C1CJE0|RNZ_STRZP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808677|sp|C1CQF2|RNZ_STRZT RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|259494138|sp|B2IMY3|RNZ_STRPS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|147762731|gb|EDK69691.1| ribonuclease Z [Streptococcus pneumoniae SP18-BS74] gi|147765184|gb|EDK72113.1| ribonuclease Z [Streptococcus pneumoniae SP19-BS75] gi|147922455|gb|EDK73574.1| ribonuclease Z [Streptococcus pneumoniae SP3-BS71] gi|147925543|gb|EDK76620.1| ribonuclease Z [Streptococcus pneumoniae SP6-BS73] gi|147930590|gb|EDK81572.1| ribonuclease Z [Streptococcus pneumoniae SP23-BS72] gi|168996091|gb|ACA36703.1| ribonuclease Z [Streptococcus pneumoniae Hungary19A-6] gi|172043795|gb|EDT51841.1| ribonuclease Z [Streptococcus pneumoniae CDC1873-00] gi|182628935|gb|ACB89883.1| ribonuclease Z [Streptococcus pneumoniae CGSP14] gi|183569874|gb|EDT90402.1| ribonuclease Z [Streptococcus pneumoniae CDC1087-00] gi|183573522|gb|EDT94050.1| ribonuclease Z [Streptococcus pneumoniae CDC0288-04] gi|225721713|gb|ACO17567.1| ribonuclease Z [Streptococcus pneumoniae 70585] gi|225725860|gb|ACO21712.1| ribonuclease Z [Streptococcus pneumoniae P1031] gi|225727534|gb|ACO23385.1| ribonuclease Z [Streptococcus pneumoniae Taiwan19F-14] gi|298238063|gb|ADI69194.1| ribonuclease Z [Streptococcus pneumoniae TCH8431/19A] gi|301793855|emb|CBW36248.1| ribonuclease Z [Streptococcus pneumoniae INV104] gi|301799712|emb|CBW32277.1| ribonuclease Z [Streptococcus pneumoniae OXC141] gi|301801537|emb|CBW34229.1| ribonuclease Z [Streptococcus pneumoniae INV200] gi|302598284|gb|EFL65329.1| ribonuclease Z [Streptococcus pneumoniae BS455] gi|302637485|gb|EFL67972.1| ribonuclease Z [Streptococcus pneumoniae SP14-BS292] gi|302638864|gb|EFL69325.1| ribonuclease Z [Streptococcus pneumoniae SP-BS293] gi|302641663|gb|EFL72022.1| ribonuclease Z [Streptococcus pneumoniae BS458] gi|302644142|gb|EFL74399.1| ribonuclease Z [Streptococcus pneumoniae BS457] gi|302646422|gb|EFL76648.1| ribonuclease Z [Streptococcus pneumoniae BS397] gi|306483932|gb|ADM90801.1| ribonuclease Z [Streptococcus pneumoniae 670-6B] gi|327390404|gb|EGE88745.1| ribonuclease Z [Streptococcus pneumoniae GA04375] gi|332075968|gb|EGI86434.1| ribonuclease Z [Streptococcus pneumoniae GA41301] gi|332077101|gb|EGI87563.1| ribonuclease Z [Streptococcus pneumoniae GA17545] Length = 309 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 82/295 (27%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVIE------- 160 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 161 ---------AIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRK-TD 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHIS 276 >gi|262045520|ref|ZP_06018542.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037213|gb|EEW38462.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 256 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG++ C +S N ++D GP Sbjct: 1 MKIDVLGCGSAFS----------CT--------QNTSAL---RVIDADNKQWLIDCGPTV 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAP 112 + + V IDA+ +TH H DH G+ L ++ +++P+ +Y P Sbjct: 40 PRALWQRGGEVNDIDAIYFTHVHPDHCTGLTALLNHWKSYSRQKPVIIYCQP 91 >gi|242280847|ref|YP_002992976.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] gi|242123741|gb|ACS81437.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638] Length = 251 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 39/245 (15%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G++ + K T S+ + ++D G + Sbjct: 1 MKCTFLGVGSAF---------------DAKQ--TNVSVLV-----NAEGRNFLLDCGFNA 38 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAAPDCMKHLFE 120 + +RE +DAV +H H DH G+ + G L R I + + + Sbjct: 39 GHKCIRELQDPSLLDAVWISHFHGDHFFGLPFIFGSCLTAGRSKEIHICGPQGIEGKVVQ 98 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + + + + ++ + + H S+ G R Sbjct: 99 IIDLAYPTMRAKLG------FDVVFHECCPGEEGSVAGFNLRTCAMDHSE-SAQGLRLEC 151 Query: 181 VA----YCTDVNAFPAESLEKLQNLDFLIIDALKNGLH-SSHFSLSESLKKIELINPKNA 235 Y D + + L +N+D I+++ H S++E ++ Sbjct: 152 AGKTVFYSGDGS-LTEDCLSVGRNVDLGILESYGLDESVKGHSSVAECIEFAHSAEMGKV 210 Query: 236 ILTHM 240 L H+ Sbjct: 211 ALVHL 215 >gi|41614872|ref|NP_963370.1| hypothetical protein NEQ076 [Nanoarchaeum equitans Kin4-M] gi|40068596|gb|AAR38931.1| NEQ076 [Nanoarchaeum equitans Kin4-M] Length = 635 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYM-----------QVLREQVLSIDAVLYTHPHAD 87 RS+L + + +++D G D + ++ V +DAV+ TH H D Sbjct: 202 RSALLLQT-----KESRILLDFGVDLSLPPNNKNAYPIVELPEFDVKELDAVVITHAHLD 256 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H+ + K VY P + Sbjct: 257 HVG----FVPFLYKMGYKGPVYLTPPTLD 281 >gi|85711234|ref|ZP_01042294.1| metallo-beta-lactamase family protein [Idiomarina baltica OS145] gi|85695147|gb|EAQ33085.1| metallo-beta-lactamase family protein [Idiomarina baltica OS145] Length = 430 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 45/151 (29%), Gaps = 38/151 (25%) Query: 52 SNTTVIVDTGPDFYM-------------------QVLREQVLSIDAVLYTHPHADHIHGI 92 + +++D G F + + + ++A++ TH H DHI I Sbjct: 9 AGRWLMIDCGVSFDEPLNPAKPNSLKHEVVCADPRFITDNKDELEAIIITHAHEDHIGAI 68 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY-CFKALDDRTYPPIVNPIVIENNDVPIC 151 + L + QK +Y P L + Y F L +IE ND Sbjct: 69 EDL--WLRWQK---PIYTTPYTAAVLRKKLAYTAFAEL----------VSIIEVND---G 110 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 G I H G A Sbjct: 111 ETVQIGPFSVTWIRFTHSLPEPFGVVIETPA 141 >gi|313638648|gb|EFS03771.1| metal-dependent beta-lactamase superfamily III protein [Listeria seeligeri FSL S4-171] Length = 243 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 36/217 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRP-- 105 +++D G + I+A + +H H DH+ + +R K+++P Sbjct: 27 DGFKLLIDIGASAVSIMQNYIDPDDINAAIISHYHPDHVADVGILQHIRLLSQKKEKPPV 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y + D+R Y + V + + G + + Sbjct: 87 LPIYGHKE----------------DERGYSYLEMNNVTKAIEYKADDTLEIGPFKVTFLK 130 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------S 215 H + R Y D +A+ + + D L+ D N H Sbjct: 131 TVH-PVVCYAMRIEAAGKVFVYTAD-SAYQDSFIHFSKEADLLVADT--NFFHDLAGKTK 186 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + E K + N K+ +L+H+ D +++ K Sbjct: 187 VHMASVEVAKIAKEANVKSLLLSHLPEVGDLEVLKKE 223 >gi|289434195|ref|YP_003464067.1| beta-lactamase domain family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170439|emb|CBH26979.1| beta-lactamase domain family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 243 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 36/217 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRP-- 105 +++D G + I+A + +H H DH+ + +R K+++P Sbjct: 27 DGFKLLIDIGASAVSIMQNYIDPDDINAAIISHYHPDHVADVGILQHIRLLSQKKEKPPV 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + +Y + D+R Y + V + + G + + Sbjct: 87 LPIYGHKE----------------DERGYSYLEMNNVTKAIEYKADDTLEIGPFKVTFLK 130 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH------S 215 H + R Y D +A+ + + D L+ D N H Sbjct: 131 TVH-PVVCYAMRIEAAGKVFVYTAD-SAYQDSFIHFSKEADLLVADT--NFFHDLAGKTK 186 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 H + E K + N K+ +L+H+ D +++ K Sbjct: 187 VHMASVEVAKIAKEANVKSLLLSHLPEVGDLEVLKKE 223 >gi|269963594|ref|ZP_06177917.1| hypothetical protein VME_43010 [Vibrio harveyi 1DA3] gi|269831607|gb|EEZ85743.1| hypothetical protein VME_43010 [Vibrio harveyi 1DA3] Length = 447 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 80/296 (27%), Gaps = 63/296 (21%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T +G P I P +S+ + G+ + D G Sbjct: 27 NEMRVTFMGTS-----PMI----------RPGQA--NTSIYVEL----GNGDNFVFDLGE 65 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---PIDVYA-----AP 112 + V +D V TH H DH + L + R P+ +Y Sbjct: 66 ASIANYIGAGVALNELDKVFITHLHVDHFGSLPYLYQFGGWNGRWEKPLTIYGPSGRNPE 125 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG----VIEAIPILQQH 168 D +H+ E D + + IE + ++ + H Sbjct: 126 DGTRHMVEGMLQMLSWHQD-AFDVFPSGNDIEVVEFDFKDDGGVIYDVDGVQVSHWRRSH 184 Query: 169 GRISSLGFRFG-------NVAYCTDVNAFP-AESLEKLQNLDFLI--------------- 205 + + +R N+ + + P ++ D + Sbjct: 185 AKDGASAYRLDWKINDDENLCFIWTGDGRPTELDIKYGTGCDLFVTEVQTELVGLASIVQ 244 Query: 206 -IDA-LKNGLHSSHFSLSESLKK-IELINPKNAILTHMHVDLDY-DMVLKSTPSRV 257 + A L +H + + + P+ + THM D Y + + Sbjct: 245 GVPAFLTRYTIDTHHTSGYAAGWLANQVQPRLFMTTHMEFDPYYNNETVAQVREHW 300 >gi|258509804|ref|YP_003172555.1| metallo-beta-lactamase family protein [Lactobacillus rhamnosus GG] gi|258540989|ref|YP_003175488.1| metallo-beta-lactamase family protein [Lactobacillus rhamnosus Lc 705] gi|257149731|emb|CAR88704.1| Metallo-beta-lactamase family protein [Lactobacillus rhamnosus GG] gi|257152665|emb|CAR91637.1| Metallo-beta-lactamase family protein [Lactobacillus rhamnosus Lc 705] Length = 269 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 45/234 (19%) Query: 38 TRSSLKISRVSERGS-----NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHAD 87 R S+ S S + V+VD G + M+ + + +D+V TH H+D Sbjct: 7 MRVSVLASSSSGNATYIETPGHKVLVDAGLSGKKIEALMKSIGRDLTDVDSVFITHEHSD 66 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ G+ L ++ ++VYA L +S + + D Sbjct: 67 HVRGVGVLA----RRYPQLNVYANAKTFAALPKSVGKI----PEAQLRLFDMGTTLTLGD 118 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + + A Q H + TD +++ D +++ Sbjct: 119 LDVESFGVSHDAAAPQFYQFHHDGKA-------FTILTDTGYVSDRVAGTIRDADAYVME 171 Query: 208 A------LKNGLHS-----------SHFSLS---ESLKKIELINPKNAILTHMH 241 L+ G + H S ++L + + K L H+ Sbjct: 172 CNHDLEMLRTGPYPWPLKQRILSDQGHLSNEDGADALMDVIGLRTKRIYLGHLS 225 >gi|226311865|ref|YP_002771759.1| hypothetical protein BBR47_22780 [Brevibacillus brevis NBRC 100599] gi|226094813|dbj|BAH43255.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 555 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 45/140 (32%), Gaps = 30/140 (21%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F + L E + A++ TH H DHI GI YFL+Q Sbjct: 33 VLIDCGSKFPDESYLGIDLIIPDISYLLENQEKVRALIVTHGHEDHIGGI----PYFLRQ 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VY + + L + I I+ + + G + Sbjct: 89 LN-VPVYGTRLTLGLIELK-------LKEHNLLHQSTLISIDRDS-----TISFGSLTIS 135 Query: 163 PILQQHGRISSLGFRFGNVA 182 H LG F A Sbjct: 136 FFQTNHSIPDCLGVVFETKA 155 >gi|254283853|ref|ZP_04958821.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] gi|219680056|gb|EED36405.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR51-B] Length = 264 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 53/219 (24%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +TT+++D G R +IDA+L TH HADH G+ + + I Sbjct: 20 DSTTLLIDCGFPRREAERRIARRGIAPSNIDAILVTHEHADHAAGV-----AAISRAHGI 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + G I + Sbjct: 75 PVYLTHGTAATGRITGAH-------------------RLHRFNSDDSFVVGDIAVTSVTV 115 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHSS 216 H + +R + V TD+ + + ++ L+++ L++G + + Sbjct: 116 PHDAREPVQYRLASGDCGVGVLTDLGSSTSHVVDAFSGCSALLLEFNHELALLQSGPYPA 175 Query: 217 -----------HFSLSESLKKIELINPKN---AILTHMH 241 H + ++L +E ++ I+ H+ Sbjct: 176 SLKRRVAGDFGHLNNQQALDLLEALDSPRLQDVIVAHIS 214 >gi|330805178|ref|XP_003290563.1| hypothetical protein DICPUDRAFT_155078 [Dictyostelium purpureum] gi|325079309|gb|EGC32915.1| hypothetical protein DICPUDRAFT_155078 [Dictyostelium purpureum] Length = 925 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 81/256 (31%), Gaps = 72/256 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG ++ P R+ S + +S N ++VD G Sbjct: 519 KLMFLGTASAS----------------PNLFRSVSGILVS----PDENNHMLVDCGQSSI 558 Query: 66 MQVL----REQVLSI----DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 Q+ R++ I + +H HADH GI + Sbjct: 559 SQLEIFFGRKKTKQILMETHLIWVSHLHADHHLGIGSV---------------------- 596 Query: 118 LFESFRYCFKALDDRTYPPIVNPI-----VIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + E FK I+ + +I VP+ +A + A + + Sbjct: 597 IIER-NLAFKEAGTGAKSLILQEVCAKLSLISLTSVPVVHCNASFGLVATFKNKDIPK-- 653 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH------SSHFSLSESLK 225 G++ Y D P++ L +N D LI +A + H + SE+L Sbjct: 654 --GYKI---TYSGDTR--PSKLLVAAGKNSDLLIHEATFTDEYQEDAVAKRHSTFSEALG 706 Query: 226 KIELINPKNAILTHMH 241 + + K ILTH Sbjct: 707 VAKDMKAKQTILTHFS 722 >gi|222480271|ref|YP_002566508.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453173|gb|ACM57438.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 297 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 90/290 (31%), Gaps = 61/290 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+++ VP R ++ + + +++VD G Sbjct: 1 MELTVLGSGSAMPVP----------------DRVQAGYLL-----DDGDRSLLVDCGSGV 39 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFES 121 ++ + VL TH H DH+ + L ++V K L + Sbjct: 40 LQRLAGTETGYEGVSTVLLTHHHLDHVAALLPLMKARWLAGEEHLEVVGPAGT-KSLLDG 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + LD R I + +V A + +H + +RF Sbjct: 99 LLDVHEYLDGR--------IDLAVREVSAARPFAAAGFDVTARETRHS-MDGFAYRFSPP 149 Query: 179 --------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG-----LHSSHFSLSESLK 225 G + D AF A D L+ D H + L ESL Sbjct: 150 SADFDPANGPLTLSGDTEAF-AGMASFADGSDLLVHDCSFPDGTDVSNHPNPTQLGESLA 208 Query: 226 KIELINPKNAILTHMH-VDLDYDMVLKST------PSRVVPAFDGMQFSS 268 ++ +L+H++ + + + V A DG++ + Sbjct: 209 GTDI---DTLLLSHLYPHTGGREREMAQSVRDAGFDGDVEVASDGLRVAI 255 >gi|148361310|ref|YP_001252517.1| metal-dependent hydrolase of the beta-lactamase superfamily transporter III [Legionella pneumophila str. Corby] gi|296108650|ref|YP_003620351.1| hypothetical protein lpa_04352 [Legionella pneumophila 2300/99 Alcoy] gi|148283083|gb|ABQ57171.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Legionella pneumophila str. Corby] gi|295650552|gb|ADG26399.1| Hypothetical protein lpa_04352 [Legionella pneumophila 2300/99 Alcoy] Length = 255 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 34/249 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G+S + P+N +S++ + N T+++D G D Sbjct: 2 TLKITFLGSGSSFAI-------------GPENY--QSNVLLEL-----ENDTLLIDAGTD 41 Query: 64 FYMQVLREQVLSID--AVLYTHPHADHIHGI--DGLRGYFLKQKRPIDVY-AAPDCMKHL 118 + + + D V +H H DH G+ L YF A+ +K L Sbjct: 42 IKYSLRDQGLSYKDIKNVYISHLHYDHCGGLEWFALITYFDPNHSHKPCLIASDKIIKEL 101 Query: 119 FE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 ++ S + + ++ + + +++ + ++ + S G Sbjct: 102 WDKSLSGGLSTLPHERANLSAFFDVRPVKQYEGFVWQSIKFKLVQTVHYYSEYELMPSFG 161 Query: 176 FRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELI 230 F + + +D + P + + + D + D H SE +K + Sbjct: 162 LIFSYNKSRILFTSDTQSCPVQLISFYEESDIIFHDCETTESKSGVHAHYSELVKLPSHL 221 Query: 231 NPKNAILTH 239 K L H Sbjct: 222 K-KKMWLYH 229 >gi|23012958|ref|ZP_00052927.1| COG0664: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Magnetospirillum magnetotacticum MS-1] Length = 677 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 12/123 (9%) Query: 53 NTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++D GP+ + +Q L V ++ + +TH H DH G+ L + I YA Sbjct: 188 GKIYLIDAGPNVHSALQALGIGVQEVEGIFHTHCHDDHFCGLTTL----FRADHRIKYYA 243 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P + + +D E D+ + + + +E PI H Sbjct: 244 LPAVRASVAKKLAALTNIGEDSFGE------YFEICDLSLGIWNDIAGLEVKPIFSPHPV 297 Query: 171 ISS 173 ++ Sbjct: 298 ETT 300 >gi|288937635|ref|YP_003441694.1| metallo-beta-lactamase [Klebsiella variicola At-22] gi|288892344|gb|ADC60662.1| metallo-beta-lactamase domain protein [Klebsiella variicola At-22] Length = 256 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG++ C +S N ++D GP Sbjct: 1 MKIDVLGCGSAFS----------CT--------QNTSAL---RVIDADNKQWLIDCGPTV 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAP 112 + + V IDA+ +TH H DH G+ L Y+ +++P+ +Y P Sbjct: 40 PRALWQRGGGVNDIDAIYFTHVHPDHCTGLTALLNYWKSGSRQKPLIIYCQP 91 >gi|154502856|ref|ZP_02039916.1| hypothetical protein RUMGNA_00676 [Ruminococcus gnavus ATCC 29149] gi|153796395|gb|EDN78815.1| hypothetical protein RUMGNA_00676 [Ruminococcus gnavus ATCC 29149] Length = 301 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 87/278 (31%), Gaps = 75/278 (26%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGI------- 92 ++ + R + +++++D G + ++E+ ID + +TH H DHI G+ Sbjct: 19 WLTSLMTRFNGSSLLIDCGEGTQI-AIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 93 ---DGLRGYF-------------LKQKRP-ID---VYAAPDCMKHLFESFRY-------- 124 D L+ P + +Y + + FE Y Sbjct: 78 GNADRKEPLTLIGPKGLERVVSALRVIAPELPFPIIYKEIEGAEQTFELNGYRLKAFRVN 137 Query: 125 ----CFKALDDRTYPPIVNPIVIENNDVP----------ICMKSAGGVIEAIPILQQHGR 170 C+ + + + ++P +++ G++ +L Sbjct: 138 HNVLCYGYTMEIDRAGKFDVERAKEQEIPQKYWKHLQKGETIETENGILTPDMVLGP--- 194 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHS-------SHFSLSE 222 G + + Y TD P S+ E ++ D I + + H + E Sbjct: 195 -PRKGLK---LTYTTDTR--PTNSIRENAKDSDLFICEGMYGEKEKAAKAVEYKHMTFYE 248 Query: 223 SLKKIELINPKNAILTHMHVDLDY-----DMVLKSTPS 255 + + K LTH L D V + P Sbjct: 249 AAHLAKDAQVKEMWLTHYSPSLTRPEEYMDEVRRIFPE 286 >gi|152972931|ref|YP_001338077.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892544|ref|YP_002917278.1| metal-dependent hydrolase-like protein [Klebsiella pneumoniae NTUH-K2044] gi|150957780|gb|ABR79810.1| ribonuclease Z [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544860|dbj|BAH61211.1| similar to metal-dependent hydrolases of the beta-lactamase superfamily III [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 256 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG++ C +S N ++D GP Sbjct: 1 MKIDVLGCGSAFS----------CT--------QNTSAL---RVIDADNKQWLIDCGPTV 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAP 112 + + V IDA+ +TH H DH G+ L ++ +++P+ +Y P Sbjct: 40 PRALWQRGGEVNDIDAIYFTHVHPDHCTGLTALLNHWKSYSRQKPVIIYCQP 91 >gi|15897910|ref|NP_342515.1| hypothetical protein SSO1043 [Sulfolobus solfataricus P2] gi|284173568|ref|ZP_06387537.1| hypothetical protein Ssol98_02780 [Sulfolobus solfataricus 98/2] gi|41017578|sp|Q97Z88|RNZ_SULSO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|13814227|gb|AAK41305.1| Conserved hypothetical protein [Sulfolobus solfataricus P2] gi|261602619|gb|ACX92222.1| ribonuclease Z [Sulfolobus solfataricus 98/2] Length = 291 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 90/293 (30%), Gaps = 69/293 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P +R + + R +++D G Sbjct: 2 IQIFFLGTGAGS----------------PSKKRKLPAFLVRR-----EGVNILLDCGEGT 40 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFE 120 ++ + SI + +H H DH+ G+ G+ L +K + + L+ Sbjct: 41 QYTLMNYKLGINSIKIIGISHMHGDHVFGLLGVIASMGLLDRKETLYILGPRKLKDFLYT 100 Query: 121 SFRY-----CFKALDDRTY-------PPIVNPIVIENN------------DVPICMKSAG 156 SF Y FK Y IE+ D K Sbjct: 101 SFEYSKFNPSFKIEFIDNYNDENITISTFKTCHTIESQGYLIMEKDRVKIDEEKLEKEKI 160 Query: 157 GVIEAIPILQQHGRISSLG-----------FRFGNVAYCTDVNAFP-AESLEKLQNLDFL 204 I L++ + G R VAY D P ++ ++ +D L Sbjct: 161 RDWRVIRKLKEGKTVEYNGKLLKPEDYLVIKRGSKVAYTGDT--MPCQSVVDSVKGVDIL 218 Query: 205 IIDALKNGLHSS----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 I D+ S+ H +++++ K + K LTH+ Y+ V + Sbjct: 219 IHDSTFLDEPSAYTYGHSNVTDAAKIALEASVKLLALTHISPR--YEDVSEHL 269 >gi|300691873|ref|YP_003752868.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum PSI07] gi|299078933|emb|CBJ51593.1| putative metal-dependent hydrolase of the beta-lactamase superfamily I [Ralstonia solanacearum PSI07] Length = 261 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 30/176 (17%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLR 96 + S+ + T +++D G V L S++A+L TH H DH+ Sbjct: 16 ALLVESSDGTTRTRILLDCGFGIRETVRRLERLGCAPESLNAILVTHEHGDHVG-----S 70 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y K + V+ + + +L I + + Sbjct: 71 AYAFAAKYNVPVWTSHGTCRAT--------ASLRGADRAAIRFCRADD--------VFSI 114 Query: 157 GVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + +P H L F F + + TD L +L +++ Sbjct: 115 GDLRILPYTVPHDAREPLQFIFDDGARRLGVLTDAGMSTEYLCGHLTDLHAFVLEC 170 >gi|257868074|ref|ZP_05647727.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257874404|ref|ZP_05654057.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257802157|gb|EEV31060.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257808568|gb|EEV37390.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 206 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 10/109 (9%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 A+L TH H DHI +D LR Y+ I VY +P + L + + + Sbjct: 49 AILLTHTHYDHIGAVDHLRDYY-----QIPVYVSPLEQEWLSDPMKNLSGRHPELG---T 100 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + E + AG + + I S+ F F D Sbjct: 101 ITARPAEFELELKEYEIAGMSFKVVATPGH--SIGSVSFIFDKFVVSGD 147 >gi|206577619|ref|YP_002240985.1| metallo-beta-lactamase domain protein [Klebsiella pneumoniae 342] gi|206566677|gb|ACI08453.1| metallo-beta-lactamase domain protein [Klebsiella pneumoniae 342] Length = 256 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG++ C +S N ++D GP Sbjct: 1 MKIDVLGCGSAFS----------CT--------QNTSAL---RVIDADNKQWLIDCGPTV 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAP 112 + + V IDA+ +TH H DH G+ L Y+ +++P+ +Y P Sbjct: 40 PRALWQRGGGVNDIDAIYFTHVHPDHCTGLTALLNYWKSGSRQKPLIIYCQP 91 >gi|182417290|ref|ZP_02625996.2| metallo-beta-lactamase domain protein [Clostridium butyricum 5521] gi|237667235|ref|ZP_04527219.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378851|gb|EDT76368.1| metallo-beta-lactamase domain protein [Clostridium butyricum 5521] gi|237655583|gb|EEP53139.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 237 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 56/195 (28%), Gaps = 44/195 (22%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + ++ L +H H DH + IDVY + + FKA Sbjct: 38 LGFNLNNVVGALVSHEHKDHC----KCVNEVITSG--IDVYMSKGTAAGIE------FKA 85 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR-----FGNVAY 183 + + + G +P QH LGF G + + Sbjct: 86 P--------IETVNYRVQQLKHAESYRIGSFLVVPFNVQHDVNEPLGFLIYNKDIGKILF 137 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA------------LKNGLHSSHFSLSESLKKIELIN 231 TD ++D ++I+ + SH SL ++ N Sbjct: 138 ATDTYYL----KNTFMDIDHVLIECNYSEDVLPQLPQWRARTIKSHMSLETLKDTLKHWN 193 Query: 232 PKNA---ILTHMHVD 243 + L H+ D Sbjct: 194 LRKTKDITLIHISND 208 >gi|330877418|gb|EGH11567.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 224 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 49/192 (25%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 + A+L TH HADH+HG+ L ++ + VY + ++ + + Sbjct: 19 NQLSAILVTHEHADHVHGVGLLS-----RRYNVPVYLSSGTLRGMRK------------- 60 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNA 189 P+ ++ + G + + H + F F + TD+ + Sbjct: 61 --PVEVAGLLAGGE-----SLQVGALGIDVVSVAHDALEPTQFVFNDGKRRFGLLTDLGS 113 Query: 190 FPAESLEKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELIN- 231 + + L++ Q LD L+I+A L G + H + ++ + + Sbjct: 114 YCSNVLQRYQGLDALMIEANHCRDMLARGQYPVFLKQRVGCETGHLNNHQAASLVSELGW 173 Query: 232 --PKNAILTHMH 241 ++ +L H+ Sbjct: 174 QDLQHLVLAHLS 185 >gi|302669218|ref|YP_003832368.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] gi|302396882|gb|ADL35786.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] Length = 727 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 35/172 (20%) Query: 53 NTTVIVDTGPDFYMQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T + +D G L + + DAVL+TH H DH+ I + Sbjct: 27 DTRIAIDFGSPLPEDDAKELDVIGLTKGKSAFDAVLFTHYHGDHVGEIGRINS------- 79 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIP 163 I VY + Y P + I+ D + + G + +P Sbjct: 80 DIPVYMGGFAKDVIAAYKGYN---------PHFFADVDIDRIDELVAGNEITIGSLRIMP 130 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDV------NAFPAESLEKLQNLDFLI 205 IL H S F + + D S++KL +D LI Sbjct: 131 ILSDHSAAESFMFLIQADNFQILHTGDFRLHGLYREELLSSVKKLGKIDLLI 182 >gi|257876963|ref|ZP_05656616.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257811129|gb|EEV39949.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 206 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 10/109 (9%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 A+L TH H DHI +D LR Y+ I VY +P + L + + + Sbjct: 49 AILLTHTHYDHIGAVDHLRDYY-----QIPVYVSPLEQEWLSDPMKNLSGRHPELG---T 100 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + E + AG + + I S+ F F D Sbjct: 101 ITARPAEFELELKEYEIAGMSFKVVATPGH--SIGSVSFIFDKFVVSGD 147 >gi|145338580|ref|NP_188247.2| TRZ4 (TRNASE Z 4); 3'-tRNA processing endoribonuclease/ catalytic [Arabidopsis thaliana] Length = 942 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +++ I S ++++D G Sbjct: 571 RDDMEIVLLGTGSSQ----------------PSKYRNVTAIYIDLFS----RGSILLDCG 610 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E V ++ + +H HADH G+ Sbjct: 611 EGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGL 649 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGL-HSSHFSLSESLKKIELINPK 233 + Y D P +E + LI DAL +H + E++K Sbjct: 801 KMVYSGDTRPCPE-MVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIKVGSSAGVY 859 Query: 234 NAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 +LTH V+ + AFD M + Sbjct: 860 RTVLTHFSQRYPKIPVIDESHMHNTCIAFDMMSINM 895 >gi|26449703|dbj|BAC41975.1| unknown protein [Arabidopsis thaliana] Length = 942 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +++ I S ++++D G Sbjct: 571 RDDMEIVLLGTGSSQ----------------PSKYRNVTAIYIDLFS----RGSILLDCG 610 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E V ++ + +H HADH G+ Sbjct: 611 EGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGL 649 Score = 38.6 bits (89), Expect = 0.90, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGL-HSSHFSLSESLKKIELINPK 233 + Y D P +E + LI DAL +H + E++K Sbjct: 801 KMVYSGDTRPCPE-MVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIKVGSSAGVY 859 Query: 234 NAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 +LTH V+ + AFD M + Sbjct: 860 RTVLTHFSQRYPKIPVIDESHMHNTCIAFDMMSINM 895 >gi|9279709|dbj|BAB01266.1| unnamed protein product [Arabidopsis thaliana] Length = 927 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +++ I S ++++D G Sbjct: 556 RDDMEIVLLGTGSSQ----------------PSKYRNVTAIYIDLFS----RGSILLDCG 595 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E V ++ + +H HADH G+ Sbjct: 596 EGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGL 634 Score = 38.6 bits (89), Expect = 0.92, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGL-HSSHFSLSESLKKIELINPK 233 + Y D P +E + LI DAL +H + E++K Sbjct: 786 KMVYSGDTRPCPE-MVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIKVGSSAGVY 844 Query: 234 NAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 +LTH V+ + AFD M + Sbjct: 845 RTVLTHFSQRYPKIPVIDESHMHNTCIAFDMMSINM 880 >gi|270292281|ref|ZP_06198495.1| ribonuclease Z [Streptococcus sp. M143] gi|270279327|gb|EFA25170.1| ribonuclease Z [Streptococcus sp. M143] Length = 309 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|83647550|ref|YP_435985.1| beta-lactamase superfamily hydrolase [Hahella chejuensis KCTC 2396] gi|83635593|gb|ABC31560.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Hahella chejuensis KCTC 2396] Length = 329 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 21/95 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S GVP + S +++E + ++D G Sbjct: 1 MELTFLGT--SSGVPT---------------KTRNVSAVCIKMAE--TKDWWLLDCGEGT 41 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIHGIDGLRG 97 ++L + + + V TH H DH +G+ GL Sbjct: 42 QHRLLHCKHTLKQLRGVCITHVHGDHCYGLPGLLA 76 >gi|290512373|ref|ZP_06551740.1| metallo-beta-lactamase domain-containing protein [Klebsiella sp. 1_1_55] gi|289775368|gb|EFD83369.1| metallo-beta-lactamase domain-containing protein [Klebsiella sp. 1_1_55] Length = 256 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 25/112 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG++ C +S N ++D GP Sbjct: 1 MKIDVLGCGSAFS----------CT--------QNTSAL---RVIDADNKQWLIDCGPTV 39 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFL--KQKRPIDVYAAP 112 + + V IDA+ +TH H DH G+ L Y+ +++P+ +Y P Sbjct: 40 PRALWQRGGGVNDIDAIYFTHVHPDHCTGLTALLNYWKSGSRQKPLIIYCQP 91 >gi|80159793|ref|YP_398537.1| metallo beta-lactamase family protein [Clostridium phage c-st] gi|78675383|dbj|BAE47805.1| metallo beta-lactamase family protein [Clostridium phage c-st] Length = 450 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 42/213 (19%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGID 93 S+ + + +++D G + Y+Q ++ V +D V+ THPH DHI G+D Sbjct: 103 SILVEQ-----DKHFMLIDAGNNEDDKLVIDYLQ--KQGVKKLDYVIGTHPHEDHIGGMD 155 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + F + E+F+ + ++ ++ I Sbjct: 156 KVIDNFDIGTLLMPK------KNTTTETFKDVLMSAKNKG---------LKITQPTIGTN 200 Query: 154 SAGGVIEAIPI-LQQHGRISSLGF------RFGNVAYC--TDVNAFPAESLEKLQNLDFL 204 G + + H S + RFGN ++ D + + NLD L Sbjct: 201 YNLGKATFTILAPKDHDYESVNNYSIVQKLRFGNTSFIFTGDAESISEMEMVN-ANLD-L 258 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 D LK G H S S ++ ++ ++PK +++ Sbjct: 259 HADVLKVGHHGSKTSTCQA--FLDKVSPKYSVI 289 >gi|158290938|ref|XP_312464.4| AGAP002474-PA [Anopheles gambiae str. PEST] gi|157018137|gb|EAA08192.4| AGAP002474-PA [Anopheles gambiae str. PEST] Length = 745 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPD--FYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D F ++E V +IDAVL ++P H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDQGFIKEIKKYVHTIDAVLLSYPDGSHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F + IV + + MK G Sbjct: 83 PIYATIPVYK-MGQMFMYDMFMSHYNMHDFDLFSLDDVDAAFDKIVQLKYNQSVAMKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N LEKLQ LI Sbjct: 142 YGITITPLPAGHLIGGTIWKI-VKVGEEDIVYATDFNHKKERHLNGCELEKLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|86357254|ref|YP_469146.1| putative metallo-beta-lactamase family protein [Rhizobium etli CFN 42] gi|86281356|gb|ABC90419.1| putative metallo-beta-lactamase family protein [Rhizobium etli CFN 42] Length = 537 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 47/217 (21%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 3 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 60 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-------VN 139 DH + L + V+A+ L + + + P V Sbjct: 61 DHYGALADLWP-----GLNVPVFASAFTSGLLEAKRNFEKATIGEVPVTPFKAGDTINVG 115 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 P IE V + ++ P G + G ++ ++ TD Sbjct: 116 PFSIEGVAVNHSIPEPMSLMIRTPA----GNVIHTGDWKIDHEPSLGPLTD-----ETRF 166 Query: 196 EKLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 167 RQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 203 >gi|331083532|ref|ZP_08332643.1| ribonuclease Z [Lachnospiraceae bacterium 6_1_63FAA] gi|330403743|gb|EGG83295.1| ribonuclease Z [Lachnospiraceae bacterium 6_1_63FAA] Length = 302 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 82/301 (27%), Gaps = 101/301 (33%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G + +P RR +SL + + +++D G + V Sbjct: 6 LLGTGGMMPLP----------------RRKLTSLMTRY-----NGSNLMIDCGEGTQVAV 44 Query: 69 LREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + ID + +TH HADHI G+ GL ++ P+ + ++ + Sbjct: 45 KEKGWSFKPIDVICFTHYHADHISGLPGLLLTMGNAERTEPLTLIGPKGLVRVVSAL--- 101 Query: 125 CFKALDDRTYPPIVNPIV--IENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-----R 177 R P + + IE + G H ++ G+ R Sbjct: 102 -------RVIAPELPFEIQCIELTQPEETYELNGY--HITAFRVNH-NVTCYGYTLEIKR 151 Query: 178 FGNV----------------------------------------------AYCTDVNAFP 191 G Y TD P Sbjct: 152 AGKFDAQRAKEQNIPLKCWNSLQKGETVVCEGNTYTPDMVLGAPRKGIKLTYTTDTR--P 209 Query: 192 AESL-EKLQNLDFLIIDAL-------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 +++ + D I + + H + E+ + + LTH Sbjct: 210 VKTISDHAAGSDLFICEGMYGEQDKDDKARAYKHMTFKEAAQLAKEAQVAEMWLTHYSPS 269 Query: 244 L 244 L Sbjct: 270 L 270 >gi|313900378|ref|ZP_07833872.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] gi|312954927|gb|EFR36601.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] Length = 248 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 45/166 (27%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +T +++D G + Q + + +A+L TH H+DHI +K Sbjct: 18 KHKDTKLVIDCGTTRKYLKSCFEQ-ISYDPMQSNALLITHTHSDHIA--------QMKLF 68 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 PI YA D + I D + Sbjct: 69 DPIPTYATQDIATS---------------------HLHAIRPYD-----RFELQDFRITV 102 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI 205 + H ++G+ + Y TD E E ++N D+ + Sbjct: 103 LPMSHDCEGTVGYVIETEDEKMVYVTDTGYIKDEVKEYIRNADYYV 148 >gi|306833195|ref|ZP_07466324.1| ribonuclease Z [Streptococcus bovis ATCC 700338] gi|304424562|gb|EFM27699.1| ribonuclease Z [Streptococcus bovis ATCC 700338] Length = 309 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G ++ S + ++ + N + D G Sbjct: 1 MELQFLGTG-----------------AGQPSKSRNVSSLVLKLLDE-INEVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAA----PDC 114 Q+L + + + TH H DHI G+ G R + ++ ++ Y Sbjct: 43 QRQILETTIKPRKVKRIFITHLHGDHIFGLPGFLASRAFQANEEQTDLEFYGPIGIRSYV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L L P ++ + N + M++ V+ A + I + Sbjct: 103 LNSLR---------LSGARLPYRIHFHEFDENSLGKVMETDKFVVYAEKLDH---TIFCI 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|291280529|ref|YP_003497364.1| hypothetical protein DEFDS_2161 [Deferribacter desulfuricans SSM1] gi|290755231|dbj|BAI81608.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 255 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 45/187 (24%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV 138 + TH H DH G+ R + + P +V+ + + + + + Sbjct: 52 LFLTHEHIDHTKGL---RTF-INNFSP-NVFCSMGTALEISKKYE--------------L 92 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAES 194 +P D K G E P H G+ F V + TD+ + Sbjct: 93 DPSNFYILDEQKLYKIDG--FEVAPFKVLHDGAEPFGYHFIIDGKGVTFSTDLGVITDDI 150 Query: 195 LEKLQNLDFLII-----DAL------------KNGLHSSHFSLSESLKKIELINPKN--- 234 ++ L + I+ D L + H S +++ + ++N K Sbjct: 151 IDFLNDSHLAIVESNYEDTLLQNGNYPGFLKNRIKSVKGHLSNKQAINALSMLNTKKLQT 210 Query: 235 AILTHMH 241 L H+ Sbjct: 211 VYLGHIS 217 >gi|294812230|ref|ZP_06770873.1| Putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces clavuligerus ATCC 27064] gi|294324829|gb|EFG06472.1| Putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces clavuligerus ATCC 27064] Length = 397 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG GA G+PR C R ++L + + +++D P + Sbjct: 1 MTLLGTGAPAGLPRPDCPCAVCATARGPLARAATALLV--------DGALLLDLTPGAAL 52 Query: 67 QVLREQ--VLSIDAVLYTHPH 85 R ++ + VL THPH Sbjct: 53 AAARAGHSLVGVRQVLLTHPH 73 >gi|42518155|ref|NP_964085.1| hypothetical protein LJ0069 [Lactobacillus johnsonii NCC 533] gi|41582439|gb|AAS08051.1| hypothetical protein LJ_0069 [Lactobacillus johnsonii NCC 533] Length = 265 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 53/172 (30%), Gaps = 33/172 (19%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I +++D G D QV + ID + +H H DH G+ Sbjct: 14 STLIET-----EQHKILMDAGLSGKKTKDLLAQV-GVDIKDIDMIFISHDHTDHSGGL-- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES I N V + N + Sbjct: 66 --GVLMRRYPQISAYANSGTWNYLIES-------------KKIGNLPVEQINTFESGVTK 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD 202 G ++ H + F A TD + ++++ D Sbjct: 111 TFGDLDVTSFATSHDAAEPQYYVFSSGGKRFACLTDTGYVSSNVKGEIKDAD 162 >gi|301299250|ref|ZP_07205536.1| putative Ribonuclease J 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853094|gb|EFK80692.1| putative Ribonuclease J 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 565 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE I V TH HAD I + + + + V+ + ++ Sbjct: 50 PDF--SYLRENSRKIVGVFLTHGHADAIGALP-----YFVSEFDVPVFGSELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 ++ + VI+ + I ++A H SLG Sbjct: 101 ----IACENEEDARKFDDFHVIDES-TEIDFENA----TISFFQTTHSIPESLGVVIKTE 151 Query: 179 -GNVAYCTDVN 188 GNV Y D Sbjct: 152 NGNVVYTGDFK 162 >gi|90961617|ref|YP_535533.1| metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227890704|ref|ZP_04008509.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus salivarius ATCC 11741] gi|90820811|gb|ABD99450.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227867642|gb|EEJ75063.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus salivarius ATCC 11741] gi|300214428|gb|ADJ78844.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius CECT 5713] Length = 565 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE I V TH HAD I + + + + V+ + ++ Sbjct: 50 PDF--SYLRENSRKIVGVFLTHGHADAIGALP-----YFVSEFDVPVFGSELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 ++ + VI+ + I ++A H SLG Sbjct: 101 ----IACENEEDARKFDDFHVIDES-TEIDFENA----TISFFQTTHSIPESLGVVIKTE 151 Query: 179 -GNVAYCTDVN 188 GNV Y D Sbjct: 152 NGNVVYTGDFK 162 >gi|327405168|ref|YP_004346006.1| RNA-metabolising metallo-beta-lactamase [Fluviicola taffensis DSM 16823] gi|327320676|gb|AEA45168.1| RNA-metabolising metallo-beta-lactamase [Fluviicola taffensis DSM 16823] Length = 462 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 40/125 (32%) Query: 1 MKDYYHFTILGC-GASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 MK LG G G S I + ++ +++D Sbjct: 1 MKKNLTIQFLGAAGTVTG----------------------SKYLIELIDQK-----LLID 33 Query: 60 TG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 G + + Q L V S+DAV+ TH H DH+ +KQ +YA Sbjct: 34 CGLFQGLKELRLLNWQSLPFDVASLDAVILTHGHLDHVG----YLPLLVKQGFKGKIYAT 89 Query: 112 PDCMK 116 ++ Sbjct: 90 EPTIE 94 >gi|169335038|ref|ZP_02862231.1| hypothetical protein ANASTE_01444 [Anaerofustis stercorihominis DSM 17244] gi|169257776|gb|EDS71742.1| hypothetical protein ANASTE_01444 [Anaerofustis stercorihominis DSM 17244] Length = 276 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 36/127 (28%) Query: 41 SLKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 SL + + +++DTG ++L + +DA++ +H H DH G+D Sbjct: 28 SLLVET-----GDKRILMDTGQSDVFIKNAEMLGIDLNDLDAIIISHGHYDHGGGLD--- 79 Query: 97 GYFLKQKRPID-VYAAP---------------------DCMKHLFESFRYCFKALDDRTY 134 +L + I +Y + + ++ + F Y + + Sbjct: 80 --YLNEIDNIPSIYISEKALIPKFSINKKNNKYYFNGIEVNDNIKKHFHYIYNKEEIFKG 137 Query: 135 PPIVNPI 141 +VN I Sbjct: 138 IYLVNNI 144 >gi|220932240|ref|YP_002509148.1| beta-lactamase domain protein [Halothermothrix orenii H 168] gi|219993550|gb|ACL70153.1| beta-lactamase domain protein [Halothermothrix orenii H 168] Length = 406 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 52 SNTTVIVDTGPDFYMQ----VLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Y +R + +D V+ THPH DHI G+D + F K + Sbjct: 57 DTKNMLIDAGSNKYSNKVINYIRHQGINQLDYVIATHPHEDHIGGLDRVISTFRIGKIFM 116 Query: 107 D 107 Sbjct: 117 P 117 >gi|238018903|ref|ZP_04599329.1| hypothetical protein VEIDISOL_00763 [Veillonella dispar ATCC 17748] gi|237864387|gb|EEP65677.1| hypothetical protein VEIDISOL_00763 [Veillonella dispar ATCC 17748] Length = 268 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 32/172 (18%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N+ ++ D G ++ L + ++ + +H H+DHI G+ L ++ I Sbjct: 26 GNSVILHDVGISCRRIVNGLKELHIDMAQVEGIFISHEHSDHIAGLQQLL-----KRFDI 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + + + + +IE + + G + Sbjct: 81 PVYTKQGTWREIQDK-------------LIVPKNQLIELTKGSLSL----GNLVVESFGV 123 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 H +G TD L ++ + L+++A H Sbjct: 124 SHDAADPIGINVFAGKDKATVVTDTGVISDSILHRMDDTTLLVLEA-NYDPH 174 >gi|28378742|ref|NP_785634.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|254556945|ref|YP_003063362.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|300768260|ref|ZP_07078165.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180934|ref|YP_003925062.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271579|emb|CAD64484.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|254045872|gb|ACT62665.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|300494324|gb|EFK29487.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046425|gb|ADN98968.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 574 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 22/140 (15%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE I V TH HAD I + YFL + + V+ + ++ Sbjct: 51 PDF--SYLRENADRIVGVFLTHGHADAIGAL----PYFLNEFN-VPVFGSELTIE----- 98 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + + P N + + G + H S+G Sbjct: 99 ----LAKIQLQKDPKAKNFNDFHIINEKTEIDF--GTVTVSFFRTTHSIPDSMGIVLQTS 152 Query: 179 -GNVAYCTDVNAFPAESLEK 197 G V Y D P + + Sbjct: 153 AGEVVYTGDFKFDPTAAGDY 172 >gi|242060800|ref|XP_002451689.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor] gi|241931520|gb|EES04665.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor] Length = 875 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 32/144 (22%) Query: 53 NTTVIVDTG------PDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G +F +Q +++ I+AV+ TH H DHI + + Sbjct: 108 DRYILIDAGVMFPDYDEFGVQKIIPDTTFIKKWSHKIEAVIITHGHEDHIGAL----PWV 163 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + + L R + I + G Sbjct: 164 IPALDSTTPIFASSFTMELIKKRLKEFGIFLSSRL------------KVLRIKKRFQAGP 211 Query: 159 IEAIPILQQHGRISSLG--FRFGN 180 E PI H G R G+ Sbjct: 212 FEVEPIRVTHSIPDCCGLVLRCGD 235 >gi|226363262|ref|YP_002781044.1| hypothetical protein ROP_38520 [Rhodococcus opacus B4] gi|226241751|dbj|BAH52099.1| hypothetical protein [Rhodococcus opacus B4] Length = 385 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 90/326 (27%), Gaps = 90/326 (27%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG A+ + R SS+ + + ++D GP Sbjct: 64 LILLGT-AAGPIAVPG-------------RSGTSSVLVV------GDRPYLIDAGPWSSR 103 Query: 67 QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYF-----LKQKRPIDVYAA-------- 111 ++++ + S+ V TH H+DHI + + + + VY Sbjct: 104 KLIQAGISADSLGGVFVTHMHSDHIADLVNVFWLVGGTPSYTARGVVPVYGPGSAGALPT 163 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN------------------------- 146 P K + R + +++ + N Sbjct: 164 PRAGKIIPIRNPLTPAPGLSRLFTGVLDAYAYDTNIRNAEKGAGTDYNRMLSLHDVLPPE 223 Query: 147 -----------DVPICMKSAGGVIEAIPILQQHGRI-SSLGFRF----GNVAYCTDVNAF 190 ++ + L HG + SL +RF G V + D Sbjct: 224 SSGASAENTAPEMEPFPVFEDDRVRVTATLVPHGPVYPSLAYRFDTEDGAVTFSGDTAK- 282 Query: 191 PAESLEKLQNLDFL---IID----------ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 + + Q D L +ID AL + +H + + + + +L Sbjct: 283 SSNVVRLAQGSDILVHEVIDVDFYAETSGPALVEHMIHAHTTAQDVGRVATDAGVRQVVL 342 Query: 238 THMHVDLDYDMVLKSTPSRVVPAFDG 263 +H+ + V F G Sbjct: 343 SHIGPGDPQQVTDDQWERGVKSTFAG 368 >gi|160881256|ref|YP_001560224.1| hypothetical protein Cphy_3130 [Clostridium phytofermentans ISDg] gi|160429922|gb|ABX43485.1| hypothetical protein Cphy_3130 [Clostridium phytofermentans ISDg] Length = 192 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 32/153 (20%) Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFGNVA----YCTDVNAFPAE 193 N +I++ D+ + E I I +H R+ +L + G+ Y TD+ ++ Sbjct: 49 NLHLIKSGDIKVL-----NDYEIIAIDSEHDKRLEALVYIIGHKGKYIFYGTDLLNLSSK 103 Query: 194 SLEKLQN--LDFLIIDALKNGLHS--SHFSLSESLKKIELINPKN-------AILTHMHV 242 + +QN LD +++D ++ H + ++ I + + TH+ Sbjct: 104 AWNIIQNYKLDLVVLDQTYGKGYNQGGHLDSGQVIEIINEMRVRKIINENTYVYATHISH 163 Query: 243 D-------LDYDMVLKSTPSRVVPAFDGMQFSS 268 + L++ L A+DG++ Sbjct: 164 EGNDIHENLEFHSNLNKY----HIAYDGLEIKL 192 >gi|322386699|ref|ZP_08060324.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] gi|321269372|gb|EFX52307.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] Length = 579 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 81 LFENKDRIAGVFLTHGHADAIGALP-----YLLTEAKVPVFGSELTIELAK-----LFVK 130 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 +D + VI+ N + G H SLG R GN+ Y Sbjct: 131 SND-AVKKFNDFHVIDEN-----TEIEFGETVVSFFRTTHSIPESLGIVVKTREGNIVYT 184 Query: 185 TDVN 188 D Sbjct: 185 GDFK 188 >gi|309776770|ref|ZP_07671744.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308915518|gb|EFP61284.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 248 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 47/167 (28%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +T +++D G + Q + + +A+L TH H+DH+ +K Sbjct: 18 KHKDTRLVIDCGTTRKYLKSCFEQ-ISYDPMQSNALLITHTHSDHVA--------QMKLF 68 Query: 104 RPIDVYAAPD-CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 PI YA D HL Y + Sbjct: 69 DPIPTYATQDIATNHLHGIRPY---------------------------ERFEVQDFRIT 101 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI 205 + H ++G+ + Y TD E + +++ D+ + Sbjct: 102 VLPMSHDCEGTVGYVIETEDEKMVYVTDTGYIKEEVKDYIRDADYYV 148 >gi|67480899|ref|XP_655799.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] gi|56472958|gb|EAL50411.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] Length = 267 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 31/234 (13%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP---DFYMQVLREQVLSIDAVLYTHPH 85 P N R +S I +VD G + Q R + I V+ TH H Sbjct: 10 SAARPINGRMTTSTLIYT---NNGEDLYLVDCGDGITNVLTQF-RVPLEKIRGVIITHSH 65 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 +DH GI G+ V K + + F+ D P V+ I + + Sbjct: 66 SDHASGI---AGFVHSVVFGTSVELIIAAPKGIQKLVDVVFEYSGDI-VPKTVSYIDLSD 121 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---------NVAYCTDVNA---FPAE 193 + + ++PI HG I G ++A D N Sbjct: 122 DKIT-HFSIKNTSFTSVPIP-HHGSIKGHGIICQTHYTNHQDTSIAITGDTNDSSLLAEY 179 Query: 194 SLEKLQNLDFLIIDA-LKNGLHSS-----HFSLSESLKKIELINPKNAILTHMH 241 +++ L+ L+ + + LH + H + ++ + I P I+ H Sbjct: 180 IVQQKIQLNMLLHECTFASDLHENALKWGHSNPQLVIQTLLKIKPNKCIIHHFS 233 >gi|283852397|ref|ZP_06369667.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] gi|283572245|gb|EFC20235.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] Length = 268 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 30/233 (12%) Query: 39 RSSLKISRVS--------ERGSNTTVIVDTGPDFYMQV-------LREQVLSIDAVLYTH 83 +SL + + + G TV++D G + ++ +AV +H Sbjct: 18 NTSLWVEAPATAGTTGTADAGRRRTVLLDCGFTAAAALFACPALTEADRATGPEAVWISH 77 Query: 84 PHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 H DH G+ L + + R P+ V+ L + +L + P+ Sbjct: 78 FHGDHYFGLPYLLARWHEAGRTAPLAVWGGAGAEGRLPAVVDLAYPSLRAKLTFPLCFAA 137 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEK 197 V D + +A + HG L R G + Y D E Sbjct: 138 VRPGEDFSLAGLAARTAVT------GHGA-PCLALRLETGAGTLYYSGDGAP-TEACREL 189 Query: 198 LQNLDFLIIDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMV 249 + D ++ +A G + H S++E+L+ L H+ +L + Sbjct: 190 ARGCDLVVQEAYGLGAGIAGHGSVAEALEAARTAGAGTLALVHVRRELRREQA 242 >gi|115279755|gb|ABI85371.1| hypothetical protein [Vibrio cholerae] Length = 460 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 17/97 (17%) Query: 33 PKNRRTR---------SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAV 79 NRR +S+ S R +++D G D + + + A+ Sbjct: 16 AHNRRNNMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLEVEFALGHVHAL 75 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + TH H DHI + L KQ +Y + Sbjct: 76 ILTHAHIDHIGRLPWLLAAGFKQ----PIYCTAATAE 108 >gi|308234840|ref|ZP_07665577.1| hypothetical protein GvagA14_01229 [Gardnerella vaginalis ATCC 14018] gi|311115075|ref|YP_003986296.1| metallo-beta-lactamase [Gardnerella vaginalis ATCC 14019] gi|310946569|gb|ADP39273.1| metallo-beta-lactamase [Gardnerella vaginalis ATCC 14019] Length = 659 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 57/182 (31%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 135 LLIDCGVLFPEEEQPGVDLILPDF--HYIQNRLDKVDALVLTHGHEDHIGGV----PYLL 188 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + F + I +E D K G Sbjct: 189 KMRPDIPLIGSKLTL---------AFVEAKCAEHRINPKMIHVEGRD-----KLKIGPFN 234 Query: 161 AIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLE------------KL--QNLDFLI 205 I H +L A D + L KL Q +D L+ Sbjct: 235 LEFISVTHSIPDALAVCVKTPAGTLIDTGDIKLDQLPLDHRLTDLVEFGKLGEQGIDLLM 294 Query: 206 ID 207 D Sbjct: 295 AD 296 >gi|310658854|ref|YP_003936575.1| hypothetical protein CLOST_1550 [Clostridium sticklandii DSM 519] gi|308825632|emb|CBH21670.1| conserved protein of unknown function [Clostridium sticklandii] Length = 235 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 60/222 (27%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +GS +++++ G F + L + I L TH H DH I + K ID Sbjct: 18 KGSEGSLLLEAGIPFKKIKETLDFDLSDIKGCLITHEHQDHSKSIKDIA------KAGID 71 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VYA+ + + Y +++ I + + + Sbjct: 72 VYASKGTFEGCK---------VSGHRYIKVMDKQQI-----------SIAGFNILAFKTE 111 Query: 168 HGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------------- 208 H LGF + + TD K L+ + ++ Sbjct: 112 HDCNEPLGFLLYEKETKEKLLFATDTYYI----RYKFAGLNHIAVECNYCEEVLTRNINS 167 Query: 209 ------LKNGLHSSHFSLSESLKKIELINP---KNAILTHMH 241 L N + SHF L ++ ++ KN L H+ Sbjct: 168 GYMLPELANRIRRSHFGLDNVIEFLKANGTESLKNLYLLHLS 209 >gi|150400947|ref|YP_001324713.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013650|gb|ABR56101.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 284 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 13/78 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + N ++ D G + Y M++L E + D ++ +H H DH G+ + Sbjct: 22 SILV-----KSDNKKILFDAGQNPYILKKNMELLNEN-SNFDGIIISHGHYDHTDGLKDI 75 Query: 96 RGYFLKQKRPIDVYAAPD 113 + I +Y PD Sbjct: 76 --INNTEDINIPIYVHPD 91 >gi|118474645|ref|YP_892918.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] gi|118413871|gb|ABK82291.1| metallo-beta-lactamase family protein [Campylobacter fetus subsp. fetus 82-40] Length = 645 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 17/153 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S SE +++ PDF +R+ + ++ TH H DHI + YF K+ + Sbjct: 130 SFPSESMHGVDILI---PDF--DYIRKIKQKVRGIIITHAHEDHIGAV----PYFFKEFQ 180 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAGGVIEA 161 +YA P + + F + PI + E D I + + A Sbjct: 181 -FPIYATPLPLGMISNKFEEHGLKAHRSYFRPIEKRKLYEIGDFEIELIHITHSIIDASA 239 Query: 162 IPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 + I + G I G F+ + Y TD+N Sbjct: 240 LVITTKAGTILHTGDFKIDHTPIDGYPTDLNRL 272 >gi|296134203|ref|YP_003641450.1| hypothetical protein TherJR_2714 [Thermincola sp. JR] gi|296032781|gb|ADG83549.1| conserved hypothetical protein [Thermincola potens JR] Length = 323 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 68/229 (29%), Gaps = 53/229 (23%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-RGYFLKQ-KRPIDVYAA 111 + VD GP + + V +DA+ +H H DH G++ L G + + Sbjct: 70 IYVDPGPGAPSKAAKAGVDPGYLDAIYISHGHTDHYAGVESLIEGMCWAMSRERGLLLVP 129 Query: 112 PDCM-KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L F D P V + K + PI HG Sbjct: 130 QKVLAEGLISRFHQGLGDKDYYKGGPQVQILRA-------YEKVNINELILTPIPVHHGG 182 Query: 171 ISSLGFRFG----NVAYCTDVNAF-----PAESLEK----------------------LQ 199 + GF + Y +D N P E Sbjct: 183 -ENYGFVLDAGGLRIGYTSDTNYITSFVTPEGIKEYGRWGPVMDLLEVEDYREDLKKVFA 241 Query: 200 NLDFLIIDALKNGLHSS--HFSLSESLKKIELIN---PKNAILTHMHVD 243 +D LI + H++ H L+ ++ L+ + I+TH Sbjct: 242 EVDVLIANV---TSHNALMHRHLT-AIGLAHLLKNSSVRMCIITHFGYS 286 >gi|157325335|ref|YP_001468755.1| gp51 [Listeria phage B054] gi|300765832|ref|ZP_07075806.1| hypothetical protein LMHG_12468 [Listeria monocytogenes FSL N1-017] gi|66733340|gb|AAY53156.1| gp51 [Listeria phage B054] gi|300513409|gb|EFK40482.1| hypothetical protein LMHG_12468 [Listeria monocytogenes FSL N1-017] Length = 245 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 67/201 (33%), Gaps = 48/201 (23%) Query: 50 RGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++++ G +F L + +++A L +H H DH+ G+ + + I Sbjct: 32 SSGRSKLLLECGINFDKIRK-ALNFDLSAVEACLISHEHGDHVAGVKKML-----RTSSI 85 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA+ + L P I+ E N I G +P Sbjct: 86 KIYASEGTLSAL--------------NVPDSRQFILKEKNAQNI------GEWIILPFQT 125 Query: 167 QHGRISSLGFRF----GNVAYCTD-------VNAFPAESLEKLQNLDFLIIDALKNGLHS 215 +H LGF + + TD +E + D L + + +H Sbjct: 126 EHDAKEPLGFMIQRNNERLLFITDSYFVRYKFKNINYLMIECNYSADILEENVINKVIHP 185 Query: 216 --------SHFSLSESLKKIE 228 SHFSL + ++ Sbjct: 186 VQKKRVLQSHFSLENVKEFLK 206 >gi|134300413|ref|YP_001113909.1| beta-lactamase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053113|gb|ABO51084.1| beta-lactamase domain protein [Desulfotomaculum reducens MI-1] Length = 352 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 30/216 (13%) Query: 52 SNTTVIVDTGP-DFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++VD G D +++R + + V+ THPH DHI G+D + YF ++ Sbjct: 54 GEDSMLVDAGNNDDGEKIIRYLSQQGIKKLSVVMGTHPHEDHIGGLDDVIKYFPVER--- 110 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIEAI 162 VY + H +++R A+ ++ +E+ V I ++ + + Sbjct: 111 -VYLPK--VNHTTKTYRDVLTAIKNKNLKATAAFGGQTFNLEDARVEILAPNSS-EYKEL 166 Query: 163 PILQQHGRISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 +IS FG+ A+ D + + + + D L + LK G H SH S Sbjct: 167 NDYSIVSKIS-----FGDTAFLLTGDAEMLSEQEMLE-KGFD-LEANVLKVGHHGSHSST 219 Query: 221 SESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + K + +NP+ A+++ + + L+ Sbjct: 220 GD--KFLRAVNPQMAVISVGANNDYGHPHRETLQRL 253 >gi|326930626|ref|XP_003211445.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Meleagris gallopavo] Length = 703 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 102/300 (34%), Gaps = 64/300 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ P R SS ++ S R ++++D G + Sbjct: 351 EVVFLGTGSAI----------------PMKIRNVSSTLVNTSSTR----SLLLDCGEGTF 390 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPI-----DVY--AA 111 Q+ R +D AV +H H DH G+ + + + ++ A Sbjct: 391 GQLCRHYGEQVDQVLCNIVAVFVSHMHTDHHSGLVNILMERRRAFASLGQAFSPLFLVAP 450 Query: 112 PDCMKHLFESFRYC------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 M L E C K + ++ I + + + E Sbjct: 451 EQIMPWLHEYHNNCESILRDIKMITCQSLVKGRENIKSKARQFIASLLENYDLAEFQTCE 510 Query: 166 QQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KN 211 QH + I G++ V Y D P ++L ++ +N LI +A K Sbjct: 511 VQHCKNAFACSVIHKSGWK---VVYSGDT--MPCKALVQMGKNATLLIHEATLEDGMEKE 565 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV---LKSTPSRVVPAFDGMQFSS 268 + +H + S++++ +N + +L H Y + + +V AFD M+ Sbjct: 566 AIEKTHSTTSQAIEIGMKMNAEFIMLNHFSQR--YAKIPLFNEDFSEKVGIAFDHMRVRL 623 >gi|305432595|ref|ZP_07401756.1| metallo-beta-lactamase [Campylobacter coli JV20] gi|304444306|gb|EFM36958.1| metallo-beta-lactamase [Campylobacter coli JV20] Length = 676 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 184 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 238 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 239 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 298 >gi|255088049|ref|XP_002505947.1| predicted protein [Micromonas sp. RCC299] gi|226521218|gb|ACO67205.1| predicted protein [Micromonas sp. RCC299] Length = 791 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 44/142 (30%), Gaps = 31/142 (21%) Query: 52 SNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 N V++D G F + R + ++AVL TH H DHI + Sbjct: 155 ENRYVLLDAGLMFPDHEELGIQKVLPDVSFLARWR-DKVEAVLITHGHEDHIGAL----P 209 Query: 98 YFLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + P VYA M+ + + F D + + + + Sbjct: 210 WVIPALDPDTPVYAGLFTMQLIQRRMK-EFNLWGDGS----------RFKVIDMGERFDA 258 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 G E + H G F Sbjct: 259 GPFEMEAVRVTHSIPDCCGLIF 280 >gi|315186779|gb|EFU20537.1| RNAse Z [Spirochaeta thermophila DSM 6578] Length = 311 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 37/174 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 +LG G + +P R +S+ + R E + D G Sbjct: 7 VLGTGGMMPLP----------------YRYLTSVLVRREGEL-----FLFDCGEGTQVSL 45 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESF 122 LR + I A+ +H HADH+ G+ G+ + + P+ +Y P +++ S Sbjct: 46 RSLNLRWK--KISAIFISHTHADHVTGLPGILMLSSQVDRSEPLYIYGPPKIREYVEMS- 102 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + D + + + +C + G + IP+ H + +G+ Sbjct: 103 ----RQVLDMYINYEIVVEEVPWGESVVCYRGEGFSVRTIPLR--HTK-PCVGY 149 >gi|229011082|ref|ZP_04168276.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus mycoides DSM 2048] gi|228750254|gb|EEM00086.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus mycoides DSM 2048] Length = 417 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLTKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHLFESF 122 ++ + L F Sbjct: 77 ---IWTTRYTKEQLPAYF 91 >gi|229058439|ref|ZP_04196823.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH603] gi|228719948|gb|EEL71538.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH603] Length = 417 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLTKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHLFESF 122 ++ + L F Sbjct: 77 ---IWTTRYTKEQLPAYF 91 >gi|229132620|ref|ZP_04261468.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-ST196] gi|228650852|gb|EEL06839.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-ST196] Length = 417 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLTKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHLFESF 122 ++ + L F Sbjct: 77 ---IWTTRYTKEQLPAYF 91 >gi|229166650|ref|ZP_04294402.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH621] gi|228616904|gb|EEK73977.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus AH621] Length = 417 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLTKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHLFESF 122 ++ + L F Sbjct: 77 ---IWTTRYTKEQLPAYF 91 >gi|163939600|ref|YP_001644484.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163861797|gb|ABY42856.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 420 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 21 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLTKYGYKKK- 79 Query: 105 PIDVYAAPDCMKHLFESF 122 ++ + L F Sbjct: 80 ---IWTTRYTKEQLPAYF 94 >gi|312876068|ref|ZP_07736057.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311797266|gb|EFR13606.1| beta-lactamase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 295 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V +D V+ THPH DHI +D + Sbjct: 58 SILIKTPG----NKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|229162009|ref|ZP_04289984.1| Zn-dependent hydrolase [Bacillus cereus R309803] gi|228621456|gb|EEK78307.1| Zn-dependent hydrolase [Bacillus cereus R309803] Length = 557 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 52/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN VI+D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SNDIVIIDCGSKFPDESLLGIDLIIPDITYLQENKDKIRGLIVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + L + IVI++ + G Sbjct: 85 FLKQLN-VPIYATKLTLGLIN-------IKLKEHKLQDSTELIVIDSESL-----IEFGQ 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F G V + D Sbjct: 132 INLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|227499573|ref|ZP_03929680.1| possible hydroxyacylglutathione hydrolase [Anaerococcus tetradius ATCC 35098] gi|227218332|gb|EEI83586.1| possible hydroxyacylglutathione hydrolase [Anaerococcus tetradius ATCC 35098] Length = 200 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 18/144 (12%) Query: 46 RVSERGSNTTVIVDTG-PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V N +VD P + ++E ++I ++ TH H DH+ G++ + K Sbjct: 16 YVVSDDDNDGFLVDCAYPSKRVEEYIKENKINIKFIIQTHTHFDHVLGLE-----YFKNL 70 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +DVYA+ D K + Y D P D + + Sbjct: 71 YKVDVYASED-AKEIANDKDYNLAYSFDLHVP----------IDKYLKDGEIFSEYNIMA 119 Query: 164 ILQQHGRISSLGFRFGNVAYCTDV 187 I + S+ ++ G++ + D Sbjct: 120 IKTPGHTLDSMSYKIGDIIFSGDT 143 >gi|49184627|ref|YP_027879.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|49178554|gb|AAT53930.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] Length = 436 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 37 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 95 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 96 ---IWTTRYTKEQL 106 >gi|94310015|ref|YP_583225.1| beta-lactamase-like protein [Cupriavidus metallidurans CH34] gi|93353867|gb|ABF07956.1| metal-dependent hydrolase of the beta-lactamase superfamily I [Cupriavidus metallidurans CH34] Length = 262 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 60/213 (28%), Gaps = 54/213 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG G S G +SL I S+ S T V++D G Sbjct: 2 MRFAFLGSG-SEG----------------------NSLLIE-ASDGASVTRVLLDCGFGI 37 Query: 65 -----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 ++ L +DAVL TH H DH+ Y + + V+ + Sbjct: 38 KETARRLERLGVAPEQLDAVLVTHEHGDHVG-----SAYAFAARYKLPVHTSHGTWLATS 92 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + D + G ++ P H L F Sbjct: 93 HM-----RGADVADVRVCCADH-----------SFSVGGLQIHPYTVPHDAREPLQFVLT 136 Query: 180 N----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + + TD +L + L+++ Sbjct: 137 DGDARLGVLTDAGMETPYVTARLAGVHSLVLEC 169 >gi|308181026|ref|YP_003925154.1| metallo-beta-lactamase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046517|gb|ADN99060.1| metallo-beta-lactamase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 247 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 37/212 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR-GYFLKQKRP--- 105 + +++D G + L E + +D+VL TH H DH + L+ + L+ Sbjct: 27 GDYHLLLDCGSGA-LNALEEILDPLQLDSVLLTHYHHDHTADVGVLQYYWQLRAGERKTP 85 Query: 106 -IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y D + + E + G + + Sbjct: 86 VLPIYG----------------HTADPLNFGALTWANATEGRAYDPAAVNQIGPFDVSFL 129 Query: 165 LQQHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 +H + + + + + D P + L+ D + Sbjct: 130 PTKH-PVPAYAVKLVERATGQELVFSADTAYSPELA-TFAAGAQLLMTDT-NFAADKTGK 186 Query: 217 --HFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + ++S K + K +LTH+ D+ + Sbjct: 187 MWHMTSAQSGKIAKDARVKKLLLTHLPQDVSF 218 >gi|85703315|ref|ZP_01034419.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] gi|85672243|gb|EAQ27100.1| metallo-beta-lactamase family protein [Roseovarius sp. 217] Length = 537 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 53/203 (26%), Gaps = 46/203 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + + G ++VD G F L + ++A+ TH H D Sbjct: 3 AYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDISWLEARKGQLEAIFITHAHED 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + Y+ + VYA ++ +P V Sbjct: 63 HVGAVAH---YYGRLGA--PVYARAFTANIARRKM-------EEHGHPDKAVKTV----- 105 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 P A G + H S G G + + D F + Sbjct: 106 SPWPETVAAGPFTVGFVPLSHSIPESSGLVIDSAGGRIVHTGDFKIDLDPVVGEPFDRDL 165 Query: 195 LEKLQ--NLDFLIIDALKNGLHS 215 L + L+ D+ H Sbjct: 166 WASLSEPGVKALVCDSTNVFSHH 188 >gi|327462702|gb|EGF09024.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1057] Length = 555 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|325697370|gb|EGD39256.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK160] Length = 555 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|124007800|ref|ZP_01692502.1| cyclic nucleotide-binding domain protein [Microscilla marina ATCC 23134] gi|123986746|gb|EAY26527.1| cyclic nucleotide-binding domain protein [Microscilla marina ATCC 23134] Length = 731 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 13/131 (9%) Query: 53 NTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++D GPD + L + I+ + TH H DH G+ FLK I +A Sbjct: 256 GKIYLIDAGPDLMTSLNALGISINEIEGIFNTHAHDDHFAGL----TAFLKSDHRIKYFA 311 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 +P + + ++ + D+ + + +E P+L H Sbjct: 312 SPLVRASVAKKLSALMSIPEES------FNHYFDVQDLALDEWNNINGLEVKPMLSLH-P 364 Query: 171 ISSLGFRFGNV 181 I + F F Sbjct: 365 IETNVFYFRTF 375 >gi|330836512|ref|YP_004411153.1| RNAse Z [Spirochaeta coccoides DSM 17374] gi|329748415|gb|AEC01771.1| RNAse Z [Spirochaeta coccoides DSM 17374] Length = 308 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 101/331 (30%), Gaps = 89/331 (26%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + +LG S +P R +S + R E + D G Sbjct: 2 NFEIFVLGT--SGMMPLPG--------------RFLTSALLRREGEL-----FLFDCGEG 40 Query: 64 FY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLF 119 +++L + I+++ +H HADH+ G+ G+ + +R +Y +++ Sbjct: 41 TQVTLKMLNLKWKKINSIFISHMHADHVTGLPGILMLSSQVERDTPLYIYGPRKLKEYIE 100 Query: 120 ESFR-------------------------YCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + R Y +A + P + IE + P Sbjct: 101 ANRRILDMYINYEIIVIPVEPGRIFETDEYFVEAFELNHTKPCLGYSFIE-KERPGEFNP 159 Query: 155 AGGVIEAIP-------------ILQQHGRIS----SLGF-RFGN-VAYCTDVNAFPAESL 195 IP + + GR +G R G +Y TD FP Sbjct: 160 EAAATLGIPRGPLWGQLQKGNTVTLEDGREIHPDAVMGLPRGGRKFSYVTDSLYFP-AIA 218 Query: 196 EKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMHVDLDY--- 246 E +++ DF + + + H + ++ + + K L H Y Sbjct: 219 EHVKDADFFLCEGMFENALEASAVEKKHMTAVQAARIAHDAHVKKMGL--FHYSPRYTDK 276 Query: 247 ------DMVLKSTPSRVVPAFDGMQFSSPIP 271 + P + D M F+ P+P Sbjct: 277 EIKKLVEEARAVFPRTIHT-RDRMCFTIPLP 306 >gi|312879542|ref|ZP_07739342.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] gi|310782833|gb|EFQ23231.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM 12260] Length = 593 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 39/136 (28%), Gaps = 30/136 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F Q L E I + TH H DHI G+ + Sbjct: 57 LVVDCGLKFPEEEMLGIDFVIPDAQYLVENRHRIQGIFLTHGHEDHIGGLPFILP----- 111 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K + VY + + Y P + ++ + G Sbjct: 112 KLDVPVYGTRLTLGLVENKLNEACP-----RYRPKL-------VEIRAGETTQAGSFSVQ 159 Query: 163 PILQQHGRISSLGFRF 178 I H SLGF Sbjct: 160 GISVCHSIPDSLGFAI 175 >gi|291405009|ref|XP_002718955.1| PREDICTED: elaC homolog 2 isoform 1 [Oryctolagus cuniculus] Length = 824 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 107/300 (35%), Gaps = 60/300 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ S+ T++++D G Sbjct: 474 SQYPEVVFLGTGSAI----------------PMKIRNVSSTLVNISSD----TSLLLDCG 513 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 514 EGTFGQLCRHYGDDVDRVLGTIAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPLQPL 572 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPP---------IVNPIVIENNDVPICMKSAGG 157 V A L + C + L + P ++NP+V + M Sbjct: 573 LVVAPTQLKAWLQQYHNQCQEVLHHVSLIPAKCLQKGAEVLNPMVEGQISSLLEMCDLKE 632 Query: 158 VIEAIPILQQHGRISSLGFRFG-NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------ 209 + +H +L G V Y D P E+L ++ Q+ LI +A Sbjct: 633 FQTCLVRHCKHAYGCALVHTSGWKVVYSGDT--MPCEALVQMGQDATLLIHEATLEDGME 690 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 + + +H + S+++ + + +L H Y + +P +V AFD M+ Sbjct: 691 EEAVEKTHSTTSQAIGVGMRMKAQFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHMKV 748 >gi|284030913|ref|YP_003380844.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283810206|gb|ADB32045.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 564 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 34/139 (24%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++VD G PDF Q +RE++ I AV+ TH H DHI G+ Sbjct: 40 DGKLLVVDCGVLFPDENQPGVDLILPDF--QPIRERLHDIVAVVLTHGHEDHIGGL---- 93 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+++ I V + + L L + + + +V+E V + Sbjct: 94 PYLLRERGDIPVLGSRLTLALLE-------GKLREHRHRNVPQQVVVEGEKVRL------ 140 Query: 157 GVIEAIPILQQHGRISSLG 175 G E + H +L Sbjct: 141 GPFECEFVAVNHSIPDALA 159 >gi|307546521|ref|YP_003899000.1| beta-lactamase-like [Halomonas elongata DSM 2581] gi|307218545|emb|CBV43815.1| beta-lactamase-like [Halomonas elongata DSM 2581] Length = 302 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 86/287 (29%), Gaps = 57/287 (19%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G P G+ R+ I+ + + + D GP + Sbjct: 29 MLGTGT----PVPDGE--------------RAGSGIAVIHDD---EAYVFDIGPGVVERA 67 Query: 69 ----LREQVL-----SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHL 118 R + +ID + TH H+DHI L G + ++ + V+ Sbjct: 68 TQAAERFDIEPLTPINIDHLFLTHLHSDHILDFPELLGTYWWRRTDQLQVFGPEGTQAMS 127 Query: 119 FESFRYCFKALDDR--TYPPIVNPIVIENNDVPICMKSAGG---VIEAIPILQQHGRIS- 172 ++ + R P+ NP + I I+ HG Sbjct: 128 EGAYSMLADDTETRLKDKSPVTNPDAAYADVTEITGAGTVFEKDDIKVEAFPVSHGDWDK 187 Query: 173 SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG------------LHSS 216 + G++ + D + E + N D LI + + + Sbjct: 188 AYGYKVTTPDKTIVISGDTS-INEEVQRQAANADILIHEVISRRGWEELPEQWQAYHQYA 246 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H E + + P +L + L Y ++S V +DG Sbjct: 247 HTLTDELAELAGVAEPDLLVL---YHVLHYGAPIESVLDEVQSQYDG 290 >gi|254168474|ref|ZP_04875318.1| hypothetical protein ABOONEI_2642 [Aciduliprofundum boonei T469] gi|197622529|gb|EDY35100.1| hypothetical protein ABOONEI_2642 [Aciduliprofundum boonei T469] Length = 520 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 64/206 (31%), Gaps = 71/206 (34%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-----------Y 124 +DAVL TH H DH I LR I + A+P+ + + Y Sbjct: 87 VDAVLLTHAHMDHYGMIGYLRF-------DIPLVASPETLAIIKAYQDAGKSDNATSVIY 139 Query: 125 CFKALDDRTYPPIV--NPIVIENNDVPI-------------------------------- 150 K +D + PI+ I+NN+ I Sbjct: 140 GAKREEDSSSMPILKSKGNSIKNNEEKIRKYLMLRRLIPTEELSYEEIDFLCLQSTEERM 199 Query: 151 ---CMKSAGGVIEAIPI-----LQQHGRISSLGFRFGN-----VAYCTDVN---AFPAES 194 G +E++P H ++G+ + +AY D E+ Sbjct: 200 DYLAEMLEFGHLESLPFKVNAHPVDHSIYGAVGYIIEDGNSKKIAYTGDFRMHGERGEET 259 Query: 195 LEKL---QNLDFLIIDALKNGLHSSH 217 L+ + + D LII+ + H Sbjct: 260 LKFINKAKGSDVLIIEGTRLEDDREH 285 >gi|325969390|ref|YP_004245582.1| beta-lactamase [Vulcanisaeta moutnovskia 768-28] gi|323708593|gb|ADY02080.1| beta-lactamase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 317 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 38/203 (18%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHG 91 RT + + I N V++DTG D ++ L I A++ TH HADHI G Sbjct: 36 RTNAGVLIV-----DDNECVVIDTGIDEDSGRRIFNAVKSLNLKIRAIVNTHHHADHIGG 90 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFE---SFRYCFKALDDRTYPPIVNPIVIENNDV 148 +K+ VYA P+ + Y F + P ++ ++E V Sbjct: 91 ----NALIVKRSGAT-VYATPEDKPFIERPVLEPLYLFGSFP----PKLLRTKLLEAEGV 141 Query: 149 PI-CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 P+ + + + + +G +GNV + D FP +D Sbjct: 142 PVRDLDDLRREVGFEAMPLPGHTMGMVGISYGNVLFTADA-FFP--------------VD 186 Query: 208 ALKNGLHSSHFSLSESLKKIELI 230 ++ H ++ +L+ + + Sbjct: 187 IIQKYGAPYHLNVKSALESLRKL 209 >gi|255076089|ref|XP_002501719.1| metallo-beta-lactamase protein [Micromonas sp. RCC299] gi|226516983|gb|ACO62977.1| metallo-beta-lactamase protein [Micromonas sp. RCC299] Length = 339 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Query: 52 SNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++DTG P + E V ++ +L TH H DHI G+ +R Sbjct: 54 GPSRWLIDTGEGRREYIPLLRKAMEDEGVTGLEGILLTHYHGDHIGGLRDVRAL 107 >gi|218902905|ref|YP_002450739.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|218539616|gb|ACK92014.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] Length = 419 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|224367586|ref|YP_002601749.1| hypothetical protein HRM2_04710 [Desulfobacterium autotrophicum HRM2] gi|223690302|gb|ACN13585.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 238 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 66/221 (29%), Gaps = 51/221 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G +T+++VD G R ++ AV+ TH H DHI L ++ Sbjct: 2 SGGSTSILVDAGLSGVELERRMGSRNLLPEDLSAVVVTHEHTDHIQ-----AAGVLSRRY 56 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y + V+ I + + +E P Sbjct: 57 NLPIYINSKTYAAAAKKLG-------------RVDRITLFECGSAFHIN----DLEITPF 99 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H + LG + TD+ + L + L ++A L G + Sbjct: 100 SISHDAVDPLGMTVEFDRVKLGIATDLGIATHLVKQHLHDCSLLYVEANHDPGMLDQGPY 159 Query: 215 S-----------SHFSLSESLKKIELINPK---NAILTHMH 241 H S E+ + + + + IL H+ Sbjct: 160 PWYLKQRVKGRTGHLSNQEAASLVAEVRTQALAHVILAHLS 200 >gi|187766729|gb|ACD36969.1| chloroplast RNase J variant 1 [Chlamydomonas reinhardtii] Length = 920 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 30/138 (21%) Query: 52 SNTTVIVDTG------PDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V++D G D MQ L + I+A++ TH H DHI + + Sbjct: 140 GDRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWKDRIEALIITHGHEDHIGAL----PW 195 Query: 99 FLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + P +YA+ M+ + + D++ + + + G Sbjct: 196 VVPALDPATPIYASSFVMQLVKRRLT-EYNLWDEKRFIT-----------FDMRQRFQAG 243 Query: 158 VIEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 244 PFEIEPVRVTHSIPDCCG 261 >gi|148272298|ref|YP_001221859.1| putative Zn-dependent hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830228|emb|CAN01161.1| putative Zn-dependant hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 212 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 55/178 (30%), Gaps = 56/178 (31%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVYAAPDCMKHLFESFRYCFKAL 129 DA++ TH HADH + +Q + I +YA + + Sbjct: 38 DAIVITHEHADH---------WTPEQLKRILDKNEGVPIYAPSGVAAAVGD--------- 79 Query: 130 DDRTYPPIVNPIVIENNDV----PICMKSAGGVIEAIPILQQHGRISS---LGFRFGN-V 181 + V+E D P ++ GG H I LG + + Sbjct: 80 --------FDVTVVEAGDTIEAGPFTLRFFGGT-----HAVIHESIPVVDNLGVLVNDTL 126 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y D P +D L A +SES+ + + P+ A TH Sbjct: 127 YYAGDSFTIPEGVE-----VDLLAAPAGAPW-----MKISESIDYVLAVRPRRAFPTH 174 >gi|307595786|ref|YP_003902103.1| KH-domain/beta-lactamase-domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550987|gb|ADN51052.1| KH-domain/beta-lactamase-domain protein [Vulcanisaeta distributa DSM 14429] Length = 643 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 20/134 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-----PDFYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 RS++ + R +++++D G +L E + ++DAV+ TH H DHI Sbjct: 198 RSAILV-----RTKESSILLDCGVKPSSSGDEAPLLDEVDLDTLDAVVITHAHMDHIG-- 250 Query: 93 DGLRGYFLKQKRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 Y K VY M+ L Y +A + PP + + Sbjct: 251 --YVPYLFKYGYKGPVYMTEPTKYLMEVLLT--DYIEQAESEGRVPPYSRQDLAQALYHT 306 Query: 150 ICMKSAGGVIEAIP 163 I + A + P Sbjct: 307 ITLNYADHPTDISP 320 >gi|156743999|ref|YP_001434128.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156235327|gb|ABU60110.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 561 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 75/240 (31%), Gaps = 56/240 (23%) Query: 36 RRTRSSLKISRVSERGSNTTVI--------VDTGPDFYM-------------QVLREQVL 74 R R+ + + E G N V+ +D G F LR+Q Sbjct: 4 NRLRA-IPLGGAGEVGRNMWVLEQNDEILVLDCGVMFPEADMLGVDLVLPDITYLRDQKD 62 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 I A++ TH H DHI I Y + + +Y + L L + Sbjct: 63 KIKAIVLTHGHEDHIGAI----PYLVPELDFPPIYGTTLTLGMLT-------GKLKEHRL 111 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD--VN 188 V + ++ + P + G P H ++G G V Y TD + Sbjct: 112 LDRVRLMKMQAGE-PFTI----GSFTIEPFSVAHSIPDTVGLAIDTPVGLVIYLTDWKFD 166 Query: 189 AFP----AESLEKL-----QNLDFLIIDALKNGL---HSSHFSLSESLKKIELINPKNAI 236 P L KL ++ LI D ++ S + E+ I P I Sbjct: 167 HTPVDGRPTDLVKLSELGRRSPLLLITDCVRVESKGYTPSEQVVGEAFDSIFATAPGRII 226 >gi|224830815|gb|ACN66496.1| PqqB protein [Gluconobacter sp. H24] Length = 304 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 104/320 (32%), Gaps = 76/320 (23%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNR---RTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG A G P+ C + RT++S+ +S E S +++ PD Sbjct: 5 IVLGSAAGGGFPQWNSAAPGCVAARTRQGARPRTQASIAVSADGEHWS----VLNASPDL 60 Query: 65 YMQVLREQVLS---------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 Q++ L I +V+ T D I G+ L+++ P + + + Sbjct: 61 RQQIIETPALHQKGSLRGTPIQSVILTCGEIDAITGL-----LTLREREPFTLMGSESTL 115 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQHGRIS 172 L + F ALD P + P V D P +K G + + G+ Sbjct: 116 DQLAANP--IFGALD-----PAIVPRVALMLDTPTVLKLKDGTPSGLTLMAFAVP-GKAP 167 Query: 173 ------------SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-------- 208 +LG + + A+ +E++ D L D Sbjct: 168 LYAEAEGSRPDETLGVSITDGMQTALFIPGCAHITADIIERVSQADLLFFDGTLWRDDEM 227 Query: 209 LKNGLHSS------HFSLSE----SLKKIELINPKNAILTHMHVDLDYDMVLKSTPS--- 255 ++ GL S+ + P+ +L H++ ++++ +P Sbjct: 228 IRAGLSPKTGQRMGRVSVRDNGGPVECFASCSKPRKVLL-HINNSNP--VLMEDSPERKD 284 Query: 256 ----RVVPAFDGMQFSSPIP 271 + DGM F P Sbjct: 285 VENAGWTVSEDGMTFRLETP 304 >gi|42527049|ref|NP_972147.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] gi|41817473|gb|AAS12058.1| metallo-beta-lactamase family protein [Treponema denticola ATCC 35405] gi|325474103|gb|EGC77291.1| metallo-beta-lactamase [Treponema denticola F0402] Length = 320 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 36/227 (15%) Query: 49 ERGSNTTVIVDTGPDFYMQVLR------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 E +I D G + + + ++H H DHI G+ + + Sbjct: 68 ETDDGGHLIFDAGTGIRELGIDLMKRPDYGKNTTYHLFFSHFHWDHIQGLPFFNPAYDPR 127 Query: 103 KRPIDVYAA-PDCMKHLFESFRYCFKA---LDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + I VY+ + L + +Y + L + + IE + + + G Sbjct: 128 NKII-VYSTRKKAKEFLEDQMKYPYFPISMLGEDGFGASFEFKYIEPDQKYVEI----GD 182 Query: 159 IEAIPILQQHGRISSLGF----RFGNVAYCTDVNAFP------AESLEKLQNLDFLIIDA 208 + +H + + + Y TD P ++ E + + LIIDA Sbjct: 183 TKIGWHRVRHPG-GCTAYSVIEKGKKIIYSTDTELRPRDFERNEQNAEFYTDAEMLIIDA 241 Query: 209 LKNGLHSS-------HFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 + L S H + S ++ N K+ L H + Y Sbjct: 242 -QYTLTDSILKEGWGHSTFSVAIDFAAGWNIKSIAL--FHHEPTYHD 285 >gi|251787662|ref|YP_003002383.1| ribonuclease Z [Dickeya zeae Ech1591] gi|247536283|gb|ACT04904.1| ribonuclease Z [Dickeya zeae Ech1591] Length = 304 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 45/185 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP R +S+ + R + + D G Sbjct: 1 MELIFLGTNA--GVPT--------------KERNVTSIALDLHGIRPAF--WLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK----QKRPIDVYAAP----DC 114 Q+LR + ++ + TH H DH+ G+ GL + + P+ +Y Sbjct: 43 QHQILRTPIKPGKLEKIFITHLHGDHLFGLPGL--LCSRSMAGVETPLTLYGPAGLKTFV 100 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L S + L+ P V E++ H + + Sbjct: 101 ETALTLSGSWLTYPLEVVEVVP---GTVFEDHQ-----------FRVTAHELSH-TLYCV 145 Query: 175 GFRFG 179 G+R Sbjct: 146 GYRIE 150 >gi|170706592|ref|ZP_02897052.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|254759834|ref|ZP_05211858.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|170128690|gb|EDS97557.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] Length = 419 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|165869562|ref|ZP_02214221.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167633183|ref|ZP_02391508.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167638735|ref|ZP_02397010.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170686120|ref|ZP_02877342.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|177650606|ref|ZP_02933573.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190566511|ref|ZP_03019429.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227815437|ref|YP_002815446.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|254683291|ref|ZP_05147152.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254723874|ref|ZP_05185660.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254734645|ref|ZP_05192357.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254741054|ref|ZP_05198742.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755297|ref|ZP_05207331.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|164715002|gb|EDR20520.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167513199|gb|EDR88570.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167531221|gb|EDR93899.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170669817|gb|EDT20558.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172083750|gb|EDT68810.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190562646|gb|EDV16613.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005164|gb|ACP14907.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] Length = 419 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|116628746|ref|YP_813918.1| beta-lactamase superfamily hydrolase [Lactobacillus gasseri ATCC 33323] gi|282852395|ref|ZP_06261737.1| metallo-beta-lactamase domain protein [Lactobacillus gasseri 224-1] gi|116094328|gb|ABJ59480.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Lactobacillus gasseri ATCC 33323] gi|282556137|gb|EFB61757.1| metallo-beta-lactamase domain protein [Lactobacillus gasseri 224-1] Length = 265 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 84/252 (33%), Gaps = 53/252 (21%) Query: 41 SLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S I + +++D G + QV + ID V +H H DH G+ Sbjct: 14 STLIETPQHK-----ILMDAGLSGKKTKELLAQV-GVDIKDIDMVFISHDHTDHSGGL-- 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 G +++ I YA +L ES + I V + N + Sbjct: 66 --GVLMRRYPKISAYANSGTWNYLIESNK-------------IGKLPVEQINTFESGITK 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID--- 207 G ++ H + F A TD + ++++ D +++ Sbjct: 111 TFGDLDVTSFATSHDAAQPQYYVFTSGGKRFACLTDTGYVSSTVKGEIRDADGYLMEFNY 170 Query: 208 ---ALKNGLHS-----------SHFSLSESLK-KIELINP--KNAILTHMHVDLDYDMVL 250 L+NG +S H S ++ +++++P K+ L H + + Sbjct: 171 DDMMLRNGPYSWALKHRIMSDVGHLSNDQAADTLLDVVSPKTKHIFLAHRSQHNNTQYLA 230 Query: 251 KSTPSRVVPAFD 262 T ++ A D Sbjct: 231 HETAEDLLVAGD 242 >gi|306836770|ref|ZP_07469731.1| metal-dependent hydrolase [Corynebacterium accolens ATCC 49726] gi|304567357|gb|EFM42961.1| metal-dependent hydrolase [Corynebacterium accolens ATCC 49726] Length = 253 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 91/282 (32%), Gaps = 49/282 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP NP +S + + ++I+D G Sbjct: 1 MKLTILGC--SGSVP---------TADNP------ASGYVVSF---DNAPSIILDMGSGT 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 Q+ + Q V ++H HADH L + ++ P + H Sbjct: 41 LGQLAQLQDPCDAHVAFSHLHADHCADFPSLMVW--RRFHPTAPAASRNFCFGPAATPTH 98 Query: 118 LFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L +DD + + P V +DV I +EA + +H + Sbjct: 99 LGRLSSDEVNGIDDMSDTLAFSPWVAGERQLVDDVFITPFPVNHPVEAYALRIEHAKTGK 158 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIE 228 + Y D + PA ++ + D + +A H S +E+ + Sbjct: 159 T------ITYSGDTSYTPAL-VDAARGADLFLCEATWGASSEGMAPGMHMSGAEAGRAAR 211 Query: 229 LINPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGMQF 266 + +L H+ D + + +V GMQF Sbjct: 212 EAGVRTLVLIHIQPWGDAEATVAAAREEFDGEIVLGTAGMQF 253 >gi|325294571|ref|YP_004281085.1| RNA-metabolising metallo-beta-lactamase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065019|gb|ADY73026.1| RNA-metabolising metallo-beta-lactamase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 418 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 32/190 (16%) Query: 52 SNTTVIVDTG---------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D+G PDF ++L+ +DA+ TH H DH I L + Sbjct: 24 GGVKILIDSGIRFNAKEPYPDF--ELLKVLAPELDAIFVTHAHIDHCGSIHILSSLY--- 78 Query: 103 KRPIDVYAAPDCMKHLFES------FRYCFKALDDRT-YPPIVNPIVIENNDVPICMKSA 155 +Y + + L +Y + +D +++ + Sbjct: 79 -PDTPIYTTHETAQLLSLMVEDAIKVKYIKEKSEDEWKEYKLLDETFMRLERREFFDTLN 137 Query: 156 GGVIEAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQ----NLDFLII 206 IE + H + + F+ ++ + D++ P +++E +++ L+ Sbjct: 138 IKDIEVKFLPAGH-ILGAAAFQINYDDSSSIYHTGDISLQPQKTVEAAHLPSSSVNLLVT 196 Query: 207 DALKNGLHSS 216 ++ + S Sbjct: 197 ESTYYYSNRS 206 >gi|311895964|dbj|BAJ28372.1| putative ribonuclease Z [Kitasatospora setae KM-6054] Length = 306 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 83/294 (28%), Gaps = 77/294 (26%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSQR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVY--AAPDC 114 G Q+L V + I + +H H DH G+ G+ R + P+D Y A+ Sbjct: 39 GEGTQRQMLHAGVSATGITRIALSHFHGDHCLGLPGVVQRINLDRVPHPVDAYYPASGQV 98 Query: 115 M-KHLFESFRYCFKALDDRTYP--------PIVNPIVIENNDVPICMKSAGGVI-EAIPI 164 L + Y + R P P + + ++S G + E Sbjct: 99 YFDRLRHASAY-HATAEIRERPITAPGPLPAPGAPFALAAARLSHPVESFGYRLTEPDGF 157 Query: 165 LQQHGRISSLGFRFGNVAY--------CTDVNAFPAESL--------------------- 195 + ++ LG R V D AE + Sbjct: 158 RLRPEKLRELGLRGPAVGVLQREGRVTLDDGRTVTAEQVGEVRPGQRFAFVMDTRLCDGV 217 Query: 196 -EKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 E D L+I DA H H + ++ + + +LTH Sbjct: 218 HELAAGADLLVIEATFLDRDAGLAEEHG-HLTAGQAAQVAAEAGVRTLVLTHFS 270 >gi|256159539|ref|ZP_05457307.1| metallo-beta-lactamase family protein [Brucella ceti M490/95/1] gi|256254826|ref|ZP_05460362.1| metallo-beta-lactamase family protein [Brucella ceti B1/94] gi|261222007|ref|ZP_05936288.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|265997971|ref|ZP_06110528.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] gi|260920591|gb|EEX87244.1| beta-lactamase domain-containing protein [Brucella ceti B1/94] gi|262552439|gb|EEZ08429.1| beta-lactamase domain-containing protein [Brucella ceti M490/95/1] Length = 558 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVSVYATPFTAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|49477329|ref|YP_035906.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328885|gb|AAT59531.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 436 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 37 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 95 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 96 ---IWTTRYTKEQL 106 >gi|296122343|ref|YP_003630121.1| metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Planctomyces limnophilus DSM 3776] gi|296014683|gb|ADG67922.1| Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Planctomyces limnophilus DSM 3776] Length = 243 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 57/176 (32%), Gaps = 30/176 (17%) Query: 79 VLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 V +H H DH+ G+ L +Y + + + F P Sbjct: 51 VFLSHAHLDHVCGLTYLLAPLLTGYFTSCRLYGTAATLHAVRT---HLFAEPIFPILPG- 106 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAE 193 E + + + VI + ++ G S+ FR +AY TD A Sbjct: 107 -----FEFCILEDVISCSDCVITSRSMVHPGG---SMAFRLEKNSKALAYVTDTTA-NES 157 Query: 194 SLEKLQNLDFLIIDAL---------KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 L+ ++ +D LI + + H SH S L + LTH+ Sbjct: 158 YLDWIREVDLLIHECSFRDADEKWCQPTGH-SHTSAVARLALAAKVQ--QLYLTHI 210 >gi|118477221|ref|YP_894372.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] gi|118416446|gb|ABK84865.1| Zn-dependent hydrolase [Bacillus thuringiensis str. Al Hakam] Length = 436 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 37 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 95 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 96 ---IWTTRYTKEQL 106 >gi|330443897|ref|YP_004376883.1| metal dependent hydrolase [Chlamydophila pecorum E58] gi|328807007|gb|AEB41180.1| metal dependent hydrolase [Chlamydophila pecorum E58] Length = 262 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 51/215 (23%) Query: 56 VIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G +++ V I A+L +H H+DHI GI + + Sbjct: 25 ILIDLGISKQHVKQELVSMGVHPEEIQAILISHEHSDHISGIKSFVKAY-----RTPIIC 79 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + LF+ + + N ++ H Sbjct: 80 NLETARALFQ-----------------LIDAPLTFNIFSTGSAFHFHDLKIHTFNLPHDA 122 Query: 171 ISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSS-------- 216 + +GF F +CTD+ + +L + D+L+I++ + H+S Sbjct: 123 VDPVGFIFYYRDEKFGFCTDLGWGTSLIAHQLYDCDYLLIESNHDPELVHASQRPEIYKR 182 Query: 217 -------HFSLSESLKKIELI---NPKNAILTHMH 241 H S E + + I K L H+ Sbjct: 183 RVLSKVGHISNQECGQLLRKILTPKIKKLYLAHLS 217 >gi|312870082|ref|ZP_07730218.1| ribonuclease J 1 [Lactobacillus oris PB013-T2-3] gi|311094385|gb|EFQ52693.1| ribonuclease J 1 [Lactobacillus oris PB013-T2-3] Length = 611 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E I + TH H DHI G+ F Q Sbjct: 36 IIIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 91 KVNAPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 151 GVAVHTPQGTIIQTGDFKFD----LTPVGGLPGPNLQQMAKL 188 >gi|301058596|ref|ZP_07199601.1| conserved hypothetical protein [delta proteobacterium NaphS2] gi|300447328|gb|EFK11088.1| conserved hypothetical protein [delta proteobacterium NaphS2] Length = 368 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 47/225 (20%) Query: 40 SSLKISRVSERGSNTTVIVD---TGPDFYMQ---VLREQVLSI---DAVLYTHPHADHIH 90 +S+ I R + +++VD G F+ L V ++ D +L TH H DH+ Sbjct: 124 ASVLI-----RDAGVSILVDPIFFGLSFFYTNFTPLDFDVDTMPKPDHILITHGHYDHL- 177 Query: 91 GIDGLRGYFLKQKRPIDVYAA--PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 K + V+A PD + F +L+ + + + + Sbjct: 178 -----------DKDSLSVFAPDTPDTHVITPLGYDQIFSSLEMKNRTQLDWFDAFNDGER 226 Query: 149 PICMKSAGGVIEAIPILQQHGRI-------SSLG---FRFGNVAYCTDVNAFPAESLEKL 198 I + P+ + + + G F G+ AY A Sbjct: 227 EIILLPCNHWTMRNPLTGPNQNLWGSYLIRTKTGPTIFISGDTAYFDGFKEIGAR----- 281 Query: 199 QNLDFLIIDALKNGLH----SSHFSLSESLKKIELINPKNAILTH 239 ++D I+ SH + +E+++ + + K ++ H Sbjct: 282 YDIDLAILSVGAYEPRWFMKQSHMNPAEAVQAAKDLRAKKILIVH 326 >gi|332178551|gb|AEE14240.1| RNA-metabolising metallo-beta-lactamase [Thermodesulfobium narugense DSM 14796] Length = 532 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 60/187 (32%), Gaps = 47/187 (25%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQV-------LSIDAVLYTHPHADHIHGIDGLRG 97 + +++D G P F +L + A+ TH H DHI I Sbjct: 5 ESERSLIVLDCGIKFPDPSFESSLLTADFQYVIDKKDKVKALFITHGHEDHIGAIP---- 60 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 FL +K + +Y + + K D + V I +N++ Sbjct: 61 -FLLKKVNVPIYGTKLTLGMVRA------KLKDYKISSKDVTFHEINSNEIIFVDDMFVE 113 Query: 158 VIEA---IP------ILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEK--L-----QN 200 IP I HG I G F+F D ++ E L + Sbjct: 114 SFHVNHSIPDGVGYAIHTPHGTIIHSGDFKF-------DQTPIDRKTTEYNKLVSISSKG 166 Query: 201 LDFLIID 207 +D L++D Sbjct: 167 IDLLMLD 173 >gi|222530634|ref|YP_002574516.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222457481|gb|ACM61743.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 591 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 51/169 (30%), Gaps = 36/169 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVL----------REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R N +++D G + I AVL +H H DH + Sbjct: 241 RFENEILVIDCGSQPREFCIVDIEGFLAQKGYSTNMIKAVLISHAHYDHY-------SFV 293 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 I VYA + + +F R C + N + + G Sbjct: 294 QYLPHQIPVYATKETIDLIFIMNRECLRGKK--------------INFIQYAEEFEIGKF 339 Query: 160 EAIPILQQHGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFL 204 + H + S GF FGN + Y D + LE + + L Sbjct: 340 KVSAFPNGH-ILGSAGFDIYFGNRRLIYTGDFSLHSQMILEGMSLQEIL 387 >gi|198276077|ref|ZP_03208608.1| hypothetical protein BACPLE_02262 [Bacteroides plebeius DSM 17135] gi|198270889|gb|EDY95159.1| hypothetical protein BACPLE_02262 [Bacteroides plebeius DSM 17135] Length = 274 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 84/267 (31%), Gaps = 61/267 (22%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M++ +LG G + V AC + + R + +VD Sbjct: 1 MENSMKLIMLGTGNAATV--------AC---------YNTCFALCR-----EDKYFLVDA 38 Query: 61 GPD--FYMQVLREQVL--SIDAVLYTHPHADHIHG-IDGLRGYFLKQKR-----PIDVYA 110 G Q+ + + I + TH H DHI G I +R ++ + +Y Sbjct: 39 GGGNGILSQLQKTHIPLSGIHEIFVTHAHTDHILGVIWMIRMVVQAIQKGEYQGELRIYG 98 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++ L R L + + I++ +V K +E + Sbjct: 99 HDKVVQVLDWICRM---TLPKKIVARLGEEILL--CEVKSGEKFQAIGLEVESFDIASTK 153 Query: 171 ISSLGFR-----FGNVAYCTD-----VNAFPAESLEKLQNLDFLIIDAL-------KNGL 213 GFR ++ D N + D+L+ +A + Sbjct: 154 EKQFGFRTCLPDGQSLVCLGDEPYNACNQM------YAEGADWLLCEAFCLYEDRERFKP 207 Query: 214 HSSHFSLS-ESLKKIELINPKNAILTH 239 + H S + ++ + + KN +L H Sbjct: 208 YEKHHSTALDAGRLAAQLGVKNLLLYH 234 >gi|188587610|ref|YP_001920391.1| ribonuclease Z [Clostridium botulinum E3 str. Alaska E43] gi|254808622|sp|B2V377|RNZ_CLOBA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|188497891|gb|ACD51027.1| ribonuclease Z [Clostridium botulinum E3 str. Alaska E43] Length = 315 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 89/327 (27%), Gaps = 92/327 (28%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG + G+P + N+ +S + +++D G + Sbjct: 4 LCILGT--TGGMPMV-------------NK------YLSATLININGRKILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-----IDVYAAPDCMKHLF 119 + + SID + TH H DH G+ GL R + + + L Sbjct: 43 AMREIGWGFKSIDLICITHSHGDHTIGLPGLLSTMGNSGRTEKVIIVGPKGIKEIVNGLN 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF 178 Y L+ +I+ N++ +C + + + +H + S F Sbjct: 103 IINPYLPYELEVVELENNDLKFIIDKNNMFLCEDNDKCNLILSSLEVEHSAKCLSYSFYI 162 Query: 179 GN-------------------------------------------------VAYCTDVNA 189 ++Y TD Sbjct: 163 KRRPRFSVEKASKNNVPKLLWSKLQNQEIVNYDNKIYTPDLVLDNARKGIKISYVTDTRP 222 Query: 190 FPAESLE-KLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 +L ++ D I + + + + H + ES + ILTH Sbjct: 223 IS--TLPQFIKYSDLFICEGTYGSDEDIDKAIKNKHMTFRESATLAKKGECNELILTHFS 280 Query: 242 VDLDYDM----VLKSTPSRVVPAFDGM 264 L K + A DG+ Sbjct: 281 AALSAPENFLNNAKEIFHNSIVAHDGL 307 >gi|225021184|ref|ZP_03710376.1| hypothetical protein CORMATOL_01196 [Corynebacterium matruchotii ATCC 33806] gi|224945917|gb|EEG27126.1| hypothetical protein CORMATOL_01196 [Corynebacterium matruchotii ATCC 33806] Length = 585 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 25/145 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ ++DA++ TH H DHI I + Sbjct: 50 CGVLFPSSGEPGVDL-ILPDFGP------IEDKIGNVDALVITHGHEDHIGAI----PWL 98 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + + + A+ + + R + P +IE + + + G Sbjct: 99 LKLRPDLPIIASKFTLALIAAKCREHHQ-----------RPKLIEVGNTSVENR---GPF 144 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC 184 H LG A Sbjct: 145 NLRFWAVNHSIPDCLGIAIKTKAGL 169 >gi|15605471|ref|NP_220257.1| Zn-dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76789478|ref|YP_328564.1| Zn-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|237803168|ref|YP_002888362.1| Zn-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|237805089|ref|YP_002889243.1| Zn-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311569|ref|ZP_05354139.1| Zn-dependent hydrolase [Chlamydia trachomatis 6276] gi|255317870|ref|ZP_05359116.1| Zn-dependent hydrolase [Chlamydia trachomatis 6276s] gi|3329196|gb|AAC68333.1| metal dependent hydrolase [Chlamydia trachomatis D/UW-3/CX] gi|76168008|gb|AAX51016.1| Zn-dependent hydrolase [Chlamydia trachomatis A/HAR-13] gi|231273389|emb|CAX10304.1| Zn-dependent hydrolase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274402|emb|CAX11197.1| Zn-dependent hydrolase [Chlamydia trachomatis B/Jali20/OT] gi|296436284|gb|ADH18458.1| Zn-dependent hydrolase [Chlamydia trachomatis G/9768] gi|296437213|gb|ADH19383.1| Zn-dependent hydrolase [Chlamydia trachomatis G/11222] gi|296438144|gb|ADH20305.1| Zn-dependent hydrolase [Chlamydia trachomatis G/11074] gi|297140645|gb|ADH97403.1| Zn-dependent hydrolase [Chlamydia trachomatis G/9301] gi|297748869|gb|ADI51415.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Chlamydia trachomatis D-EC] gi|297749749|gb|ADI52427.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Chlamydia trachomatis D-LC] Length = 262 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 57/229 (24%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G Q + E + S I + TH H+DHI G+ R + + Sbjct: 25 LLIDLG--ISKQAVTEALHSMGIHPEDIQGIFVTHEHSDHIAGL---RSFIKTY--RTPI 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L + C + + + H Sbjct: 78 ICNIETARSLRQLLDLC-----------------PTFKIFTTGHRFSLEDLRVQTFNVPH 120 Query: 169 GRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS- 216 + +GF F + +CTD+ + L + D+L+I++ L++ S Sbjct: 121 DAVDPVGFIFQYSGMKLGFCTDLGWVTSWITHLLCDCDYLLIESNHDPEMVLRSSRPESC 180 Query: 217 ---------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S +E ++ + K L H+ L+ + ++ Sbjct: 181 KQRILSKQGHISNAECGALLQHVLTPRIKKIYLAHLS--LECNTAEQAL 227 >gi|306836329|ref|ZP_07469309.1| metallo-beta-lactamase superfamily protein [Corynebacterium accolens ATCC 49726] gi|304567800|gb|EFM43385.1| metallo-beta-lactamase superfamily protein [Corynebacterium accolens ATCC 49726] Length = 721 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 187 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIDKVKALVVTHAHEDHIGAI----PWL 235 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 236 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVTY------GCF 281 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H +LG GN+ + D+ PA S + +D + Sbjct: 282 RVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLM 341 Query: 205 IID 207 + D Sbjct: 342 LCD 344 >gi|301336282|ref|ZP_07224484.1| hypothetical protein CmurM_00560 [Chlamydia muridarum MopnTet14] Length = 262 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 53/227 (23%) Query: 56 VIVDTGPDFYM--QVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD G + LR I +L TH H+DHI G+ R + K PI Sbjct: 25 LLVDLGISKQATVEALRSMNIHPEEIQGILITHEHSDHIAGL---RSFIKSYKTPI--IC 79 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L C N + + H Sbjct: 80 NIETARSLRHLLDLC-----------------PTFNIFTTGHSFSLEDLRIQTFNVPHDA 122 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-------LKNGLHSS--- 216 + +GF F + +CTD+ + L + D+L+I++ L++ S Sbjct: 123 VDPVGFIFHCFGIKIGFCTDLGWGTSWITHLLYDCDYLLIESNHDPEMVLQSSRPESCKQ 182 Query: 217 -------HFSLSESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 H S +E ++ + K L H+ L+ + K+ Sbjct: 183 RILSKQGHISNAECGALLQRVLTPRIKKIYLAHLS--LECNTAEKAL 227 >gi|300933059|ref|ZP_07148315.1| ribonuclease J [Corynebacterium resistens DSM 45100] Length = 750 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 28/144 (19%) Query: 35 NRRT---RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 N R + E G + ++ D G L ++ ++A++ TH H DHI Sbjct: 210 NNRLLIIDCGVLFPSSGEPGVDL-ILPDFG------YLEDKWDRVEALVVTHGHEDHIGA 262 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 I + LKQ+ I + A+ + K + R P ++ +V Sbjct: 263 I----PWLLKQRADIPIIASRFTCALISA------KCQEHRQRPKLI--------EVNED 304 Query: 152 MKSAGGVIEAIPILQQHGRISSLG 175 + G + H LG Sbjct: 305 SHESRGPFDLRFFAVNHSIPECLG 328 >gi|291405011|ref|XP_002718956.1| PREDICTED: elaC homolog 2 isoform 2 [Oryctolagus cuniculus] Length = 782 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 107/300 (35%), Gaps = 60/300 (20%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G+++ P R SS ++ S+ T++++D G Sbjct: 432 SQYPEVVFLGTGSAI----------------PMKIRNVSSTLVNISSD----TSLLLDCG 471 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ-----KRPID-- 107 + Q+ R +D AV +H HADH G+ + ++ +P+ Sbjct: 472 EGTFGQLCRHYGDDVDRVLGTIAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPLQPL 530 Query: 108 -VYAAPDCMKHLFESFRYCFKALDDRTYPP---------IVNPIVIENNDVPICMKSAGG 157 V A L + C + L + P ++NP+V + M Sbjct: 531 LVVAPTQLKAWLQQYHNQCQEVLHHVSLIPAKCLQKGAEVLNPMVEGQISSLLEMCDLKE 590 Query: 158 VIEAIPILQQHGRISSLGFRFG-NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------ 209 + +H +L G V Y D P E+L ++ Q+ LI +A Sbjct: 591 FQTCLVRHCKHAYGCALVHTSGWKVVYSGDT--MPCEALVQMGQDATLLIHEATLEDGME 648 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 + + +H + S+++ + + +L H Y + +P +V AFD M+ Sbjct: 649 EEAVEKTHSTTSQAIGVGMRMKAQFIMLNHFSQR--YAKIPLFSPDFNEKVGIAFDHMKV 706 >gi|110803763|ref|YP_698799.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] gi|110684264|gb|ABG87634.1| metallo-beta-lactamase family protein [Clostridium perfringens SM101] Length = 292 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 20/193 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D + + +ID + THPH DHI G+D + F + Sbjct: 58 NGINMLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DV 112 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIE-NNDVPICMKSAGGVIEAIP 163 + AP H +++ KA+ + I I+ D + + S Sbjct: 113 KSFYAPKV-AHTTKTYENMLKAVKNEGLKIQQIKEGTKIDLGKDTEVQVYSPVKSQYEE- 170 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 L + + + + + + D + + E L L D LK G H SH S SE Sbjct: 171 -LNNYSPVMKISYGQNSFMFTGDAESLVEK--EILNENKDLKADVLKLGHHGSHSSTSE- 226 Query: 224 LKKIELINPKNAI 236 + ++ +NP A+ Sbjct: 227 -EFLKAVNPSIAV 238 >gi|320100786|ref|YP_004176378.1| RNAse Z [Desulfurococcus mucosus DSM 2162] gi|319753138|gb|ADV64896.1| RNAse Z [Desulfurococcus mucosus DSM 2162] Length = 249 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 73/206 (35%), Gaps = 44/206 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG GA+ VP G + ++ + + + D G ++ Sbjct: 7 FLGTGAA--VPVTRG--------------------LPCIAVKADSNIYLFDVGEGCQSKM 44 Query: 69 LREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFESFRY 124 L+ + + AV THPH DH G+ G+ +K P+ + + L E FR Sbjct: 45 LKAGLSPLKVKAVFVTHPHGDHYLGLPGVIQTMGLTGRKEPLKLLLPRE----LDEYFRL 100 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GN 180 + + P V V+ N +V K I HG + + GF Sbjct: 101 ILERKLLKPGFP-VEFTVLANGEVYRDEK-----ISVRAYPVNHG-VEAYGFHVAVAGKT 153 Query: 181 VAYCTDVNAFPAES-LEKLQNLDFLI 205 + Y D P S +E + +D LI Sbjct: 154 LCYTGDT--MPCSSVVENCRGVDVLI 177 >gi|319900551|ref|YP_004160279.1| hypothetical protein Bache_0670 [Bacteroides helcogenes P 36-108] gi|319415582|gb|ADV42693.1| hypothetical protein Bache_0670 [Bacteroides helcogenes P 36-108] Length = 278 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 74/265 (27%), Gaps = 67/265 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G + V R A RT SL +VD G Sbjct: 7 ELIMLGTGNAT-VARCYNTCFA--------LRTAKSLL-------------LVDAGGGNG 44 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---------VYAAP 112 Q+ + V I + TH H DHI G + I+ VY Sbjct: 45 ILNQLEKADVALDEIHHLFITHAHTDHILG---AVWVVRMIAQRINAGKYAGKLRVYGHD 101 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 ++ L R + + + D G + + Sbjct: 102 KALQVLDWICRMTLPGKIVARLGKDIELHELNDGD-----TFEVGDLHLQCFDIASTKEK 156 Query: 173 SLGFRFGNVAYCTDVNAF--------PAESLEKLQNLDFLIIDAL----------KNGLH 214 GFR A D ++ + ++ D+++ +A H Sbjct: 157 QYGFR----ALLPDGSSLVCLGDEPYNELNRRYAEDADWMLCEAFCLYKDRELFKPYEKH 212 Query: 215 SSHFSLSESLKKIELINPKNAILTH 239 H + ++ + + + KN +L H Sbjct: 213 --HSTAMDAGRLAQQLRVKNLVLYH 235 >gi|304408481|ref|ZP_07390124.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304342540|gb|EFM08391.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 213 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 T L ERG +I+D G + R + I+A++ TH H DH+ G+D +R Sbjct: 16 TNCYLLTDEAGERG----IIIDPGMQPKRLLERIANIEIEAIVLTHAHFDHMGGVDEVR 70 >gi|311745801|ref|ZP_07719586.1| metallo-beta-lactamase family protein [Algoriphagus sp. PR1] gi|126576002|gb|EAZ80280.1| metallo-beta-lactamase family protein [Algoriphagus sp. PR1] Length = 281 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 39/193 (20%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 +L TH H DH G+ + K + + + L + R F PP+ Sbjct: 61 HILLTHLHIDHTMGLGFFQPL-YDPKVNVHFWGPSSTFEPLVQRLRRYFS-------PPL 112 Query: 138 VNPIVIENNDVPIC-----MKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTD-- 186 + E P+ M+ + G I+ H +LG+R + Y D Sbjct: 113 FPVRMDELPTHPVIHELNNMEFSIGDIKITTSYICHPG-PTLGYRLDDGESVFTYLPDHE 171 Query: 187 ----VNAFP-AESL----EKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELIN 231 ++FP + +N D L D K+ + H S+ ++ +L Sbjct: 172 PELGSSSFPYDPEWTSGYDLARNADLLFHDGEYTAEEYKSRIGWGHSSIEAAIDFGKLCG 231 Query: 232 P-KNAILTHMHVD 243 K I H D Sbjct: 232 VNKLGIF---HHD 241 >gi|126320779|ref|XP_001364239.1| PREDICTED: similar to D29 [Monodelphis domestica] Length = 368 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 88/337 (26%), Gaps = 122/337 (36%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R S++ + + D G Sbjct: 2 SMDVTFLGTG----------------SAYPSPTRGASAIALRFEGACW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR-------PIDVYAAPDC 114 Q ++ Q+ I + TH H DH G+ GL + + P+++Y Sbjct: 41 TQTQFMKSQLKAGRITKIFITHLHGDHFFGLPGLLC-TISLQNSSSASKTPMEIYGPVGL 99 Query: 115 MKHLFE---------SFRYCFKAL---DDRTYPPIVNPIVIENNDVPICMKSAGGVI--- 159 +++ +F Y L +D+ P + + I + G I Sbjct: 100 RNFIWKTMELSHSELTFPYIVHELVPTEDQCPPGELKDFSSLDKMDSIPKEIQGRTILLD 159 Query: 160 --------------EAIPILQQHGRISSLGF------RFGNV--------------AY-- 183 H RI S GF R G + AY Sbjct: 160 SAEESYVLVNDEQFLVKAFRLFH-RIPSFGFSVAEKERPGRLNAQKLKDLGVPPGPAYGK 218 Query: 184 ----CTDV--------------NAFPAESLEKLQNL---------------DFLIIDALK 210 T V P + L + D L+ +A Sbjct: 219 LKNGVTVVLENGVKVSPQDVLEKPIPGRKICILGDCSGVVGDGGVKLCFEADLLVHEATL 278 Query: 211 NGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 + H H + + + ++ K +LTH Sbjct: 279 DNAHMDKAKEYGHSTPQMAAEFAKMCKVKKLVLTHFS 315 >gi|307719292|ref|YP_003874824.1| ribonuclease Z [Spirochaeta thermophila DSM 6192] gi|306533017|gb|ADN02551.1| ribonuclease Z [Spirochaeta thermophila DSM 6192] Length = 311 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 37/174 (21%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 +LG G + +P R +S+ + R E + D G Sbjct: 7 VLGTGGMMPLP----------------YRYLTSVLVRREGEL-----FLFDCGEGTQVSL 45 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFESF 122 LR + I A+ +H HADH+ G+ G+ + + P+ +Y P +++ S Sbjct: 46 RSLNLRWK--KISAIFISHTHADHVTGLPGILMLSSQVDRSDPLYIYGPPKIREYVEMS- 102 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + D + + + +C + G + IP+ H + +G+ Sbjct: 103 ----RQVLDMYINYEIVVEEVPWGESVVCYRGEGFSVRTIPLR--HTK-PCVGY 149 >gi|15672612|ref|NP_266786.1| ribonuclease Z [Lactococcus lactis subsp. lactis Il1403] gi|41017579|sp|Q9CHT8|RNZ_LACLA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|12723533|gb|AAK04728.1|AE006296_2 conserved hypothetical protein [Lactococcus lactis subsp. lactis Il1403] gi|326406131|gb|ADZ63202.1| ribonuclease Z [Lactococcus lactis subsp. lactis CV56] Length = 307 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 79/293 (26%), Gaps = 76/293 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N ++ + + ER + D G Sbjct: 1 MEIQFLGTGAGQ-------------PSKSRNT---QAIALKMLDERNEI--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + + +++Y Sbjct: 43 QHQILNTTIKPRKITKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDLELYGPVGIKDFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE--------- 160 + L Y F +D + + + + + G + Sbjct: 103 LTALRISGSRLAYRINFHEIDSAGKIFEDDSFEVHTDLLDHTIFCLGYRVVEKNRIGELD 162 Query: 161 -------AIPILQQHGRI------SSLGFRFGNVAY------------CTDVNAFPAESL 195 +P G+I G F Y D ++ Sbjct: 163 ANALKEAGLPFGPLFGKIKKGEIVQYEGKTFDPKDYIGADKAGKIVTILGDTRK-SNVAV 221 Query: 196 EKLQNLDFLIIDALKN-------GLHSSHFSLSESLKKIELINPKNAILTHMH 241 D L+ +A H H + ++ + +LTH+ Sbjct: 222 RLAYGADLLVHEATYEANESKMAKAHG-HSTTKQAADVAKEAGVNRLLLTHIS 273 >gi|297830222|ref|XP_002882993.1| hypothetical protein ARALYDRAFT_341756 [Arabidopsis lyrata subsp. lyrata] gi|297328833|gb|EFH59252.1| hypothetical protein ARALYDRAFT_341756 [Arabidopsis lyrata subsp. lyrata] Length = 946 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +++ + S ++++D G Sbjct: 577 RDDMEIVLLGTGSSQ----------------PSKYRNVTAIYVDLFS----RGSILLDCG 616 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E V ++ + +H HADH G+ Sbjct: 617 EGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGL 655 >gi|291279096|ref|YP_003495931.1| hypothetical protein DEFDS_0695 [Deferribacter desulfuricans SSM1] gi|290753798|dbj|BAI80175.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 269 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 25/216 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++T +I D G Y + + +I + TH H DHI G+ L YF I ++ Sbjct: 31 SSNDTAIIFDAGTGLYKLNSVKNLKNI-FIFLTHLHWDHIMGLP-LFSYFYNPSANIKIF 88 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 E ++ FK +N ++ ++ K G P H Sbjct: 89 IDKKDDIDSTEFIKHLFKEPFFPVSHEKLNCN-LQIENIFHGEKITIGNHSITPYEGNHP 147 Query: 170 RISSLGFRFGN----VAYCTDV-NAFPAESL--EKLQNLDFLIIDALK------------ 210 +S+ F + N Y TD + P + + E ++ + I D Sbjct: 148 NGASM-FLYKNQNYSFLYATDYEHGSPKDEMLVEVANHVKYFIYDTTYTPEDYRGEKDGI 206 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDY 246 H + + KN +L H + +Y Sbjct: 207 PKSGWGHSTFEYGASFAKKAKVKNLVL--FHHNPEY 240 >gi|187766731|gb|ACD36970.1| chloroplast RNase J variant 2 [Chlamydomonas reinhardtii] Length = 767 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 30/138 (21%) Query: 52 SNTTVIVDTG------PDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V++D G D MQ L + I+A++ TH H DHI + + Sbjct: 140 GDRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWKDRIEALIITHGHEDHIGAL----PW 195 Query: 99 FLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + P +YA+ M+ + + D++ + + + G Sbjct: 196 VVPALDPATPIYASSFVMQLVKRRLT-EYNLWDEKRFIT-----------FDMRQRFQAG 243 Query: 158 VIEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 244 PFEIEPVRVTHSIPDCCG 261 >gi|125623465|ref|YP_001031948.1| ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|166991480|sp|A2RIV7|RNZ_LACLM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|124492273|emb|CAL97204.1| ribonuclease Z [Lactococcus lactis subsp. cremoris MG1363] gi|300070211|gb|ADJ59611.1| ribonuclease Z [Lactococcus lactis subsp. cremoris NZ9000] Length = 307 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 80/305 (26%), Gaps = 100/305 (32%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N ++ + + ER + D G Sbjct: 1 MEIQFLGTGAGQ-------------PSKSRNT---QAIALKMLDERNEI--WLFDCGEAS 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + + +D+Y Sbjct: 43 QHQILNTAIKPRKITKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDLDLYGPVGIKEFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L S + +N I++ E L H I L Sbjct: 103 LAGLRISGSHLGYR---------INFHEIDSAGKIFEDD----SFEVYTDLLDH-TIFCL 148 Query: 175 GFR-------------------------FGNV----AYCTDVNAFPAE------------ 193 G+R FG + D F + Sbjct: 149 GYRVVEKNRVGELDANALKEAGLPFGPLFGKIKKGEVVDYDGKTFDPKDYIGADKVGKIV 208 Query: 194 -----------SLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 ++ D L+ +A S H + ++ + + Sbjct: 209 TILGDTRKTNTAVRLAWQADLLVHEATYEAAESKMARAHGHSTTKQAADVAKEAGVNRLL 268 Query: 237 LTHMH 241 LTH+ Sbjct: 269 LTHIS 273 >gi|118368303|ref|XP_001017358.1| hypothetical protein TTHERM_00476500 [Tetrahymena thermophila] gi|89299125|gb|EAR97113.1| hypothetical protein TTHERM_00476500 [Tetrahymena thermophila SB210] Length = 963 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 30/104 (28%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG S P I R SS+ I E+ +++D G Y Q+ Sbjct: 520 FLGT--SCMTPTIF--------------RNNSSILI---YEQSLKQGIMLDCGEGTYYQL 560 Query: 69 L--------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 L +E + ++ ++ TH H+DH G + ++ + Sbjct: 561 LNQFGEAECQEVLRNLKLIVLTHAHSDHYLGF---QSIVYQRHK 601 >gi|224476654|ref|YP_002634260.1| putative member of metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] gi|222421261|emb|CAL28075.1| putative member of metallo-beta-lactamase superfamily [Staphylococcus carnosus subsp. carnosus TM300] Length = 207 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 26/148 (17%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N ++VD D +Q L E + A++ TH H DHI +D + F + Sbjct: 19 EDENNVLLVDPSSDGNKIIQKLNEINKPLKAIILTHAHFDHIGALDEVLEKF-----DVP 73 Query: 108 VYAAPDCMKHLFE-------SFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 VY + + F+ Y FK + + P ++ + P + + Sbjct: 74 VYLHSEEFDFFQDPSKNGSAKFKQYGFKPVISKAQPLSLD-------EGPNKIGGFEIDV 126 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDV 187 P H SL + F + A D Sbjct: 127 LHTP---GHSP-GSLTYVFNDFAVVGDT 150 >gi|52143669|ref|YP_083159.1| zinc-dependent hydrolase [Bacillus cereus E33L] gi|51977138|gb|AAU18688.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus cereus E33L] Length = 436 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 37 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 95 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 96 ---IWTTRYTKEQL 106 >gi|83311336|ref|YP_421600.1| hypothetical protein amb2237 [Magnetospirillum magneticum AMB-1] gi|82946177|dbj|BAE51041.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 759 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 12/123 (9%) Query: 53 NTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++D GP+ + +Q L V ++ + +TH H DH G+ L + I YA Sbjct: 270 GKIYLIDAGPNIHSALQALGIGVQEVEGIFHTHCHDDHFCGLTTL----FRADHRIKYYA 325 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P + + +D E D+ + + + +E PI H Sbjct: 326 LPAVRSSVAKKLAALTNIGEDSFGE------YFEICDLSLGVWNDIDGLEVRPIFSPHPV 379 Query: 171 ISS 173 ++ Sbjct: 380 ETT 382 >gi|296160940|ref|ZP_06843752.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] gi|295888829|gb|EFG68635.1| beta-lactamase domain protein [Burkholderia sp. Ch1-1] Length = 487 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 12/78 (15%) Query: 50 RGSNTTVIVDTG--PDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 G+ +++D G Q LR V ++DAV+ TH H DH ++ Sbjct: 20 DGAGLRILIDCGLFQGTKNQRLRNWNPLPIDVGTLDAVILTHAHLDHSG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMKHLF 119 VY Sbjct: 76 MGYRGPVYCTRGTRDLCQ 93 >gi|256841806|ref|ZP_05547312.1| ribonuclease Z [Parabacteroides sp. D13] gi|256736700|gb|EEU50028.1| ribonuclease Z [Parabacteroides sp. D13] Length = 304 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 94/317 (29%), Gaps = 99/317 (31%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPH 85 C P R +S + + ++D G +Q+ +R + ++ + +H H Sbjct: 11 CGSALPTTRHLATSQIVDL-----RDKLYMIDCGEGTQVQMRRMRIKFSRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRG----------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DH G+ GL + + I+ Y P + + F + P Sbjct: 66 GDHCFGLPGLISTLGMLGRNGELVIHGPKEIESYMRP-----ILDIF--------CKELP 112 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----------------- 178 + +I+ + M+ + +IP+ RI G+ F Sbjct: 113 YEIRFNLIDPTTHSLVMEDRSLSVYSIPLKH---RIPCCGYLFAEKAKEAHIIREMTDFY 169 Query: 179 ------------------------------------GNVAYCTDVNAFPAESLEKLQNLD 202 AYC+D AF + ++ +D Sbjct: 170 QVPVRMMQEIKRGADFVTPEGEVIPNARLTRPAVAPKRYAYCSDT-AFHPSIISIIEGVD 228 Query: 203 FLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 L DA + + H + ++ + K ++ H + LK Sbjct: 229 LLYHEATFAECDAARAKE-TFHSTARQAAEIAYKAQVKRLVIGHYSARYEDMAPLKKEAD 287 Query: 256 RVVPAF----DGMQFSS 268 ++ P +GM+ S Sbjct: 288 KIFPGTILGEEGMRLSV 304 >gi|218782205|ref|YP_002433523.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763589|gb|ACL06055.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 560 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 17/104 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE + ++ TH H DHI + FL + P VYA P + + Sbjct: 64 LRENKERVAGIVLTHCHEDHIGALP-----FLLKDIPAPVYATPFTIALVSHK------- 111 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 L+++ V+ I+ + + G + H + Sbjct: 112 LEEKDLLSRVDLHKIKPRE-----SFSIGPFHIEFVRASHSVVD 150 >gi|68171390|ref|ZP_00544783.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ehrlichia chaffeensis str. Sapulpa] gi|88658371|ref|YP_507753.1| metallo-beta-lactamase family protein [Ehrlichia chaffeensis str. Arkansas] gi|67999185|gb|EAM85842.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Ehrlichia chaffeensis str. Sapulpa] gi|88599828|gb|ABD45297.1| metallo-beta-lactamase family, beta-CASP subfamily [Ehrlichia chaffeensis str. Arkansas] Length = 540 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 40/132 (30%), Gaps = 34/132 (25%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F +++ ++ ++ TH H DHI GI Sbjct: 27 NGKWIIIDFGAGFADDNMPGIDMIVADISFIKKNRKNLLGIVLTHAHEDHIGGIQ----- 81 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +L +YA L + Y F+ I ++ I K G Sbjct: 82 YLWNDLQCPIYATKFTAALLQAKLKEYPFR---------------INITEIDITKKLNLG 126 Query: 158 VIEAIPILQQHG 169 I H Sbjct: 127 PFTLEFINLTHS 138 >gi|307704488|ref|ZP_07641397.1| ribonuclease Z [Streptococcus mitis SK597] gi|307621957|gb|EFO00985.1| ribonuclease Z [Streptococcus mitis SK597] Length = 309 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 83/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--CFKALDDRTYPPIVNP--IVIENNDVPICMKSAGGVI-------- 159 + L Y F D + I+ + ++ + G + Sbjct: 103 LTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVIQKDLEGT 162 Query: 160 --------EAIPILQQHGRIS-------SLGFRFGNVAYCT------------DVNAFPA 192 +P G+I G V Y + D + Sbjct: 163 LDAEKLKSAGVPFGPLFGKIKNGQDVVLEDGTEIKAVDYISAPRPGKIITILGDTRK-TS 221 Query: 193 ESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEIIARNHGHSTNMQAAQVAVEAGAKRLLLNHIS 276 >gi|296201217|ref|XP_002747940.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform 2 [Callithrix jacchus] Length = 785 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 103/299 (34%), Gaps = 66/299 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++ +P + S + +S T++++D G + Sbjct: 441 EIVFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCGEGTF 480 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYA 110 Q+ R +D AV +H HADH G+ + ++ RP+ V A Sbjct: 481 GQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPFRPLLVVA 539 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EAIPI 164 L + C K L + P P + ++ E Sbjct: 540 PTQLKPWLQQYHNQCQKILHHISMIPAKCLQEGAEISSPAMERLISSLLRTCDLEEFQTC 599 Query: 165 LQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALKN 211 L +H + + + G++ V Y D P E+L ++ ++ LI D L+ Sbjct: 600 LVRHCKHAFGCSLVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLEDGLEE 654 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 +H + S+++ +N +L H Y V +P +V AFD M+ Sbjct: 655 EAVEKTHSTTSQAISVGMRMNAAFIMLNHFSQR--YAKVPLFSPDFNEKVGIAFDHMKV 711 >gi|126656103|ref|ZP_01727487.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110] gi|126622383|gb|EAZ93089.1| hypothetical protein CY0110_03434 [Cyanothece sp. CCY0110] Length = 552 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 26/199 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +++D G ++ + +DAV +H H+DH G+ L F I +YA+ Sbjct: 36 GPHRILLDCGLRDLTPLINQNQPPVDAVFCSHAHSDHARGLKALHEAFPT----IPIYAS 91 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L + ++ P N + P + V Sbjct: 92 HVTKQLLPLN-------WPEKNSPKTANFCQGLFWEKPFELFDDLTVQLFRAGHLPGAAS 144 Query: 172 SSLGFRFG----NVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALKNGLHSSHFSL 220 SL +R + Y D + S+E L+ L D LII+ + H Sbjct: 145 ISLTYRTVERAYKLLYTGDFSLSNLQLVEGLSIEALRGLSPDILIIEGTYGTMRHPHRR- 203 Query: 221 SESLKKIELINPKNAILTH 239 + + ++ I + LTH Sbjct: 204 QQEKELMQRI---HECLTH 219 >gi|113477523|ref|YP_723584.1| beta-lactamase-like protein [Trichodesmium erythraeum IMS101] gi|110168571|gb|ABG53111.1| beta-lactamase-like [Trichodesmium erythraeum IMS101] Length = 539 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 61/183 (33%), Gaps = 28/183 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R +++D G + E + D VL +H H+DH G+ L + + Sbjct: 23 RIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAHSDHAQGLLAL----HRSFPDLP 78 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA+ K L ++ P+ IE +G +E P Sbjct: 79 IYASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELC--------SGLTVELFPAGHL 130 Query: 168 HGRISSL-----GFRFGNVAYCTD--------VNAFPAESLEKLQNLDFLIIDALKNGLH 214 G + L G R + Y D V P L L+ LD LI++ H Sbjct: 131 PGATAFLLTYTQGNRTYKLLYTGDFFLSKSRLVEGLPLAYLRGLK-LDVLIVEGSYGTAH 189 Query: 215 SSH 217 H Sbjct: 190 YPH 192 >gi|301053328|ref|YP_003791539.1| Zn-dependent hydrolase [Bacillus anthracis CI] gi|300375497|gb|ADK04401.1| Zn-dependent hydrolase [Bacillus cereus biovar anthracis str. CI] Length = 420 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 21 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 79 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 80 ---IWTTRYTKEQL 90 >gi|225863649|ref|YP_002749027.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|300117284|ref|ZP_07055074.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] gi|225786341|gb|ACO26558.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB102] gi|298725119|gb|EFI65771.1| metallo-beta-lactamase family protein [Bacillus cereus SJ1] Length = 419 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|196038912|ref|ZP_03106219.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196030057|gb|EDX68657.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] Length = 419 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|111115584|ref|YP_710202.1| ribonuclease Z [Borrelia afzelii PKo] gi|216263464|ref|ZP_03435459.1| ribonuclease Z [Borrelia afzelii ACA-1] gi|123145633|sp|Q0SMA2|RNZ_BORAP RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|110890858|gb|ABH02026.1| hypothetical protein BAPKO_0800 [Borrelia afzelii PKo] gi|215980308|gb|EEC21129.1| ribonuclease Z [Borrelia afzelii ACA-1] Length = 319 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 101/341 (29%), Gaps = 109/341 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGID-----------------------GLRGYF 99 M + ++++ I + TH HADHI G+ G++ Y Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGLLGIVMLMSQSGETRKDPLIIAGPVGIKNYT 101 Query: 100 LKQKRPIDVYAA-------------------------PDC-MKHLFESFRYCFKALDDRT 133 + +Y +KH E Y F D Sbjct: 102 KNNIDMLKIYTNYEIIYKEIIIDKTEKIIYEDKTKKIEYTRLKHSIECVGYLFIEKDK-- 159 Query: 134 YPPIVNPIVIENNDVP-----------ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 P N E ++P + G +I+ IL + + + + Sbjct: 160 -PGKFNTEKAEELNIPKGPIRKTLQDGKEILINGKIIKPSEILGKSKKGLKVAYI----- 213 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAI 236 TD F E +++++N + +II++ LK H + + ++ Sbjct: 214 --TDTGYF-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGGAANIVKQAKVLQTG 270 Query: 237 LTHMH------VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 L H DL+ P + DGM+ + Sbjct: 271 LIHFSERYTLRKDLENLLKEAKLEYPDGEIFLTKDGMRLEA 311 >gi|260889475|ref|ZP_05900738.1| VicX protein [Leptotrichia hofstadii F0254] gi|260860886|gb|EEX75386.1| VicX protein [Leptotrichia hofstadii F0254] Length = 97 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 10/79 (12%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N ++D G + + +++ I + TH H+DHI G+ + +K I Sbjct: 20 GNKKFLIDAGFSGKKIVEKLNNIEKRIEDIMGIFVTHEHSDHIQGLG-----VVSRKYDI 74 Query: 107 DVYAAPDCMKHLFESFRYC 125 +Y + + Sbjct: 75 PIYLHEATYNVIKDRIGKI 93 >gi|225677729|gb|EEH16013.1| ribonuclease Z [Paracoccidioides brasiliensis Pb03] Length = 1099 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 103/321 (32%), Gaps = 97/321 (30%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S VP R+ S ++ S + D G + Sbjct: 597 EIITLGTGSS--VPS--------------KYRSVSGTLLTVPS----VGNYLFDCGENTL 636 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LR+ + + + +H HADH G Sbjct: 637 GQLQRVFSPQELRKVLQDLKVIWISHLHADHHLGTVSVIRAWYKVVYGTLSSASSPSPEQ 696 Query: 92 -----IDGLRGYFLKQKRPID---VYA-----------APDCMKHLFESFRYCFKALDDR 132 + R + + + I+ YA + +SFR F LD Sbjct: 697 DLTKILSEKRLFVVSHAKMIEWLAEYAGVENFGFDKITPLEVDSSAADSFR--FSHLDQN 754 Query: 133 TYP-------PIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQH---GRISSLGFRFG- 179 + P P+ + + P +++A G+ + H + +S F G Sbjct: 755 SRPILNERGNPMKTLLSFNPDQSPFAAQLQAATGLSTLLTTPVMHCNGSKATSFVFPSGL 814 Query: 180 NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ + K+ ++ LI +A ++ H + E+L+ +L+ Sbjct: 815 KVSYSGDCR--PSRNFAKIGKDSTVLIHEATFEDDMYQDARAKRHSTSGEALQIAKLMRA 872 Query: 233 KNAILTHMHVDLDYDMVLKST 253 KN +LTH + + Sbjct: 873 KNIVLTHFSQRYTHKPTIPRL 893 >gi|188588652|ref|YP_001922635.1| hypothetical protein CLH_3272 [Clostridium botulinum E3 str. Alaska E43] gi|188498933|gb|ACD52069.1| conserved hypothetical protein [Clostridium botulinum E3 str. Alaska E43] Length = 267 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 80/263 (30%), Gaps = 63/263 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 T+LG G+++ V + + N ++D G Sbjct: 3 SITMLGTGSAM-VTKCYNTC---------------------FTLSKDNEYFLIDAGGGNT 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYAA 111 + + + I + +H H DH+ G + ++ ++Y Sbjct: 41 ILSNLEKANIKINKIHNMFISHNHNDHVLG----SVWVIRAVANGMLSDKYNGIFNIYCT 96 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 ++ + Y + + + + IENN ++ I + Sbjct: 97 KKSIEAIKTICSYVLQNKFLKLFDDKIIFNEIENN-----TEANILGRRTIFFDIHSTKE 151 Query: 172 SSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHSS 216 GF+ + + D + + +N+D+L +A H Sbjct: 152 LQFGFKTFLSNGKTLTFLGD-EPYREIVKDFCENVDYLFHEAFCLYSQREIFKPYEKH-- 208 Query: 217 HFSLSESLKKIELINPKNAILTH 239 H ++ ++ +++ KN IL H Sbjct: 209 HATVKDACNNAKILAVKNVILYH 231 >gi|302335766|ref|YP_003800973.1| DNA internalization-related competence protein ComEC/Rec2 [Olsenella uli DSM 7084] gi|301319606|gb|ADK68093.1| DNA internalization-related competence protein ComEC/Rec2 [Olsenella uli DSM 7084] Length = 798 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 39 RSSLKISRVSE------RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIH 90 S++I V + + + V+VD+GPD ++ R V +DAV+ TH H DH Sbjct: 540 PPSVRILDVGQGDAILVQDGPSAVLVDSGPDERVADELARLHVFRLDAVVLTHLHDDHYG 599 Query: 91 GIDGLRGYFLKQK 103 G+ L G + Sbjct: 600 GLSSLCGVVRCDR 612 >gi|227511170|ref|ZP_03941219.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227523376|ref|ZP_03953425.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] gi|227085652|gb|EEI20964.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus buchneri ATCC 11577] gi|227089482|gb|EEI24794.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus hilgardii ATCC 8290] Length = 274 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 47/166 (28%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G M + + +D +L TH H+DH L +K + Sbjct: 32 PQHKILLDAGLSGKKIANLMCSIGRDINDVDTLLVTHEHSDH-----RQSVGVLARKYDL 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +VYA + + E N P G I+ Sbjct: 87 NVYANQGTWDAMRSRIGKIPEE---------------EINIFPPDTVMDFGDIDIESFSV 131 Query: 167 QH----GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + R + TD +++ D +++ Sbjct: 132 SHDAAEPQFYVFHHRNKSFVVLTDTGYVSDRMEGVIKDADGYLLEC 177 >gi|196033463|ref|ZP_03100875.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|195993897|gb|EDX57853.1| metallo-beta-lactamase family protein [Bacillus cereus W] Length = 419 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|292655037|ref|YP_003534934.1| mRNA 3-end processing factor-like protein [Haloferax volcanii DS2] gi|291372149|gb|ADE04376.1| mRNA 3-end processing factor homolog [Haloferax volcanii DS2] Length = 640 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 54/163 (33%), Gaps = 29/163 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF------YMQ---VLREQVLSIDAVLYTHPHADHI 89 R+S +S T ++VD G Y+Q L S+DAV+ TH H DH Sbjct: 195 RASFIVSTP-----ETRILVDCGDKPGSDDVPYLQVPEALGSGANSLDAVVLTHAHLDHS 249 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDV 148 L K +Y + + Y A + PP + +V E + Sbjct: 250 A----LIPLLFKYGYDGPIYTTEPTRDLMGLLTLDYLDVASKEGRTPPYESEMVREA--I 303 Query: 149 PICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 + G + I + H LG F G+ Y Sbjct: 304 KHTIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLY 346 >gi|239637643|ref|ZP_04678615.1| putative metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] gi|239596861|gb|EEQ79386.1| putative metallo-beta-lactamase domain protein [Staphylococcus warneri L37603] Length = 207 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 12/121 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + ++A++ TH H DHI +D + K + VY + L + + Sbjct: 40 LNQINKPLEAIILTHAHYDHIGALDDII-----NKYNVPVYMHKEEFDFLND-----PEK 89 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSA--GGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + P VI + G + SL F F A D Sbjct: 90 NGTSKFKQYGMPQVISQAKPEALNEGPAQIGDFTFNVLHTPGHSPGSLSFVFDEFAVVGD 149 Query: 187 V 187 Sbjct: 150 T 150 >gi|222095417|ref|YP_002529477.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|221239475|gb|ACM12185.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] Length = 419 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYKDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|190891302|ref|YP_001977844.1| putative metallo-beta-lactamase family protein [Rhizobium etli CIAT 652] gi|190696581|gb|ACE90666.1| putative metallo-beta-lactamase family protein [Rhizobium etli CIAT 652] Length = 556 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 73/216 (33%), Gaps = 45/216 (20%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 L + ++VD G PD L + ++ A++ TH H Sbjct: 22 LALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR--FLASERKNLKAIIITHAHE 79 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DH + L + VYA+ L + F+ P + + N Sbjct: 80 DHYGALADLWP-----GLNVPVYASGFTAGLLEA--KRNFEKARIGEVPVTLFKAGDKIN 132 Query: 147 DVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFG---NVAYCTDVNAFPAESLE 196 P ++ +IP I G + G ++ ++ TD Sbjct: 133 VGPFSIEGVAVN-HSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLTD-----ETRFR 186 Query: 197 KLQNLDFLII-----DALKNGLHSSHFSLSESLKKI 227 +L + L + +AL++G+ S +SESL+KI Sbjct: 187 QLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKI 222 >gi|182626105|ref|ZP_02953866.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177908626|gb|EDT71147.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 284 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDIFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|168211456|ref|ZP_02637081.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|170710587|gb|EDT22769.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] Length = 284 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDIFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|169342818|ref|ZP_02863852.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169299075|gb|EDS81147.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] Length = 284 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDIFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|57236896|ref|YP_179849.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|57165700|gb|AAW34479.1| metallo-beta-lactamase family protein [Campylobacter jejuni RM1221] gi|315059156|gb|ADT73485.1| Zn-dependent hydrolase, RNA-metabolising [Campylobacter jejuni subsp. jejuni S3] Length = 662 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 170 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 224 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 225 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|307945433|ref|ZP_07660769.1| metallo-beta-lactamase superfamily [Roseibium sp. TrichSKD4] gi|307771306|gb|EFO30531.1| metallo-beta-lactamase superfamily [Roseibium sp. TrichSKD4] Length = 276 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 82/275 (29%), Gaps = 64/275 (23%) Query: 1 MKDYYHFTILGCGASLGVP-----RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT 55 M + + G S P R G+ C N R Sbjct: 1 MSEEFSLRFWGVRGSTPTPGTGTLRYGGETS-CLEIRAGNARM----------------- 42 Query: 56 VIVDTGPDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP---IDV 108 +VD G ++Q +D +L+TH H DHI G+ +F P I+ Sbjct: 43 -LVDCGSGARNLGMELCQKKQSADMD-ILFTHTHLDHICGL----PFFWPAFDPDSQINA 96 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------GVIEAI 162 +A L + ++ PP+ + C G G Sbjct: 97 WAGHFEEPELKLA-----DVVNRIMSPPVFPLAAKSLKALSFCDYQVGSELPVCGDATVR 151 Query: 163 PILQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDALKN-GL 213 + H + G+R + TD A+ ++ D +I DA+ Sbjct: 152 TMRLNHPG-GACGYRIEFQGKVICIITDHEHGNVEIDAKLPGFVEGADIMIYDAMYTDEE 210 Query: 214 HSS-----HFSLSESLKKIELINPKNAILTHMHVD 243 + + H + ++++ K +L H D Sbjct: 211 YETYIGWGHSTWQKAVELAREAEVKTPVL--FHHD 243 >gi|270157859|ref|ZP_06186516.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|289163877|ref|YP_003454015.1| hypothetical protein LLO_0533 [Legionella longbeachae NSW150] gi|269989884|gb|EEZ96138.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|288857050|emb|CBJ10865.1| Conserved hypothetical protein [Legionella longbeachae NSW150] Length = 254 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 22/99 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G+ LG T+ KN ++ L + +++D G D Sbjct: 1 MKLLFLGAGSGLG-------------TDSKNFQSNMLLL------TDTGKKLLIDCGTDI 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + R ID V +H HADHI G+ + K Sbjct: 42 RFSLSRAHYISNDIDTVYISHLHADHIGGV-EWLAFQRK 79 >gi|206974962|ref|ZP_03235877.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217959276|ref|YP_002337824.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|206746981|gb|EDZ58373.1| metallo-beta-lactamase family protein [Bacillus cereus H3081.97] gi|217064080|gb|ACJ78330.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] Length = 419 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYKDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|149927488|ref|ZP_01915742.1| Metallo-beta-lactamase family protein [Limnobacter sp. MED105] gi|149823761|gb|EDM82987.1| Metallo-beta-lactamase family protein [Limnobacter sp. MED105] Length = 257 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + S ++VD G +Q L + +L TH H DH+ GID L K Sbjct: 24 YLWAIVHEPSKACMVVDPGCSKSVQEFLDSHGYHLSGILVTHHHMDHVGGIDALLS---K 80 Query: 102 QKRPIDVYAAP 112 + + VY Sbjct: 81 AGKDLPVYGPA 91 >gi|50252673|dbj|BAD28842.1| putative metallo beta subunit lactamase [Oryza sativa Japonica Group] Length = 506 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTG---PDFYM----------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++D G PDF +++ I+AV+ TH H DHI + + Sbjct: 103 DRYILIDAGVMFPDFDEFGVQKIIPDTTFIKKWSHKIEAVIITHGHEDHIGAL----PWV 158 Query: 100 LK-QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + ++A+ M+ + + L R + + G Sbjct: 159 IPALDSSTPIFASSFTMELIKRRLKEFGIFLSSRL------------KVFRVRKRFQAGP 206 Query: 159 IEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 207 FEVEPLRVTHSIPDCCG 223 >gi|302528508|ref|ZP_07280850.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. AA4] gi|302437403|gb|EFL09219.1| metallo-beta-lactamase family hydrolase [Streptomyces sp. AA4] Length = 594 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 12/102 (11%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ ID ++ TH H DHI + + L+ + + +Y + L Sbjct: 97 PDFR--AIEDRLDDIDGLVLTHGHEDHIGAV----PFLLRLRPDVPIYGSRFTNALLAA- 149 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 KA + R P ++ E V V +IP Sbjct: 150 -----KAKEHRQRPKLIEVREGEKRKVGAFDLEFFAVNHSIP 186 >gi|167748562|ref|ZP_02420689.1| hypothetical protein ANACAC_03335 [Anaerostipes caccae DSM 14662] gi|167651876|gb|EDR96005.1| hypothetical protein ANACAC_03335 [Anaerostipes caccae DSM 14662] Length = 268 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 83/287 (28%), Gaps = 64/287 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G ++ V + + R +VD G Sbjct: 4 ELIMLGTGNAM-VTKCYNTC---------------------FALRNEEEYFLVDAGGGNG 41 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYAA 111 Q+ + Q+ I + TH H DHI G + +++ +Y Sbjct: 42 ILSQLEKAQIPFEQIRHMFLTHAHTDHILG----AVWIIRKAAAMMLAETYHGRFTIYCH 97 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + K L E + + + I +V + + Sbjct: 98 DEAAKVLRE----ICELTLAGKFLKFL-GSKIRIQEVKDGEGIQISDMHVRFFDIHSTKA 152 Query: 172 SSLGFRFG-----NVAYCTDVNAFPAESL--EKLQNLDFLIIDAL-----KNGLHS---S 216 GFR ++ D P SL ++ D+++ +A ++ H Sbjct: 153 KQFGFRADLEKDISLVCLGDE---PYNSLCKPYVEGADWMLCEAFCLYGMRDIFHPYEKH 209 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H + ++ E + +N +L H D D K V + G Sbjct: 210 HSTALDAGNLAEKLKVRNLVLYH-TEDTDLKNRKKQYTKEVKLLYSG 255 >gi|120403379|ref|YP_953208.1| beta-lactamase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119956197|gb|ABM13202.1| beta-lactamase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 558 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD L ++ I+A++ TH H DHI I + LKQ+ I + + + + E Sbjct: 62 PDLRH--LENRLDDIEALVVTHGHEDHIGAI----PFLLKQRADIPIVGSKFTLALVAE- 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P +V +V KS GV E H L Sbjct: 115 -----KCREHRLSPKLV--------EVAEGQKSTHGVFECQYFAVNHSIPGCLA 155 >gi|319441548|ref|ZP_07990704.1| hypothetical protein CvarD4_07251 [Corynebacterium variabile DSM 44702] Length = 711 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 70/217 (32%), Gaps = 56/217 (25%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +I+D G PDF L + ++A++ TH H DHI I + L Sbjct: 175 LIIDCGVLFPSSGEPGVDLILPDF--SYLEGKWDKVEALVVTHGHEDHIGAI----PWLL 228 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 KQ+ I + A+ + K + R P ++ V G + Sbjct: 229 KQRSDIPIIASRFTCALIAA------KCQEHRQRPKLIQ--------VDDTSHEKRGPFD 274 Query: 161 AIPILQQHGRISSLGFRFGNVAYC----TDVN-----------AFPAESLEKLQNLDFLI 205 H LG A DV PA S + +D ++ Sbjct: 275 IRFFNVGHSIPECLGIALKTPAGLLIHTGDVKMDQTPADGRPTDLPALSRFGDEGVDLML 334 Query: 206 ID---ALKNGLHSSHFSLSESLK-KIELINPKNAILT 238 D A G+ S ++ +L+ I N K +L Sbjct: 335 CDSTNATTPGVSPSEAGIAPTLERLIS--NAKQRVLV 369 >gi|307706256|ref|ZP_07643070.1| ribonuclease Z [Streptococcus mitis SK321] gi|307618347|gb|EFN97500.1| ribonuclease Z [Streptococcus mitis SK321] Length = 309 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|205355724|ref|ZP_03222494.1| hypothetical protein Cj8421_1773 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346501|gb|EDZ33134.1| hypothetical protein Cj8421_1773 [Campylobacter jejuni subsp. jejuni CG8421] Length = 664 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 172 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 226 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 227 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 286 >gi|228469681|ref|ZP_04054649.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] gi|228308700|gb|EEK17426.1| metallo-beta-lactamase family protein [Porphyromonas uenonis 60-3] Length = 303 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 28/190 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPH 85 C P S+ ++ ++D G ++ + ++A+ +H H Sbjct: 8 CGSARPTRHHLPSAQVLTVAGH-----HYLIDAGEGVQHSLIMAGYKMTQLEALFISHAH 62 Query: 86 ADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL + + +P+ + + + Y + + + I Sbjct: 63 GDHCFGLPGLLTSMAHVGRTKPLTIVTTAEVADFIR----YIEAHHVEESSYALSVTIAP 118 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGF---------RFGNVAYCTDVNAFPAES 194 + P ++ +P+ R S++GF R VA T+ P + Sbjct: 119 SDEVSPSIYTDEWITVDTLPLRH---RTSAVGFLCREHCMPRRIDPVA--TNFYQIPYSA 173 Query: 195 LEKLQ-NLDF 203 + LQ LD+ Sbjct: 174 MPALQMGLDY 183 >gi|328952408|ref|YP_004369742.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452732|gb|AEB08561.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 312 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 15/109 (13%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ G +++DT ++ L V I+A+ +H H DH G+ + Sbjct: 55 SMLITMEL-NGQTKRILMDTSNSPLVLFNNLEALERSVEDIEALFLSHGHPDHYGGLQEV 113 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 +++ P++VY PDC R P + +E Sbjct: 114 LA---RRQSPLEVYLHPDCY------LPKLLITPRGRVGPWTLEREALE 153 >gi|269126783|ref|YP_003300153.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311741|gb|ACY98115.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 667 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 64/201 (31%), Gaps = 43/201 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTG---PDFYM----QVLREQVLSIDAVLYTHPHADHIHGI 92 S L + T ++VD G D + R + AV+ TH H DH Sbjct: 244 SCLLVEA-----GGTRILVDAGVRTFDGRTLPPRDIERALEGELHAVVVTHAHNDHCG-- 296 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT--------------YPPIV 138 + Q + + A P+ ++ + + K + ++ P V Sbjct: 297 --YVPALVAQSPRLRILATPETVRLMPMMWEDTVKVMREQDRSLASWGSAATVLYGPAEV 354 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQH-----GRISSLGFRFGNVAYCTDVNAFPAE 193 +VP + G + H G + G R + D++ F E Sbjct: 355 EAAAHRCEEVPFTVPRRIGELTVELFPAGHILGAAGAVIRAGDR--RIVVTGDISGFRQE 412 Query: 194 SLEKL------QNLDFLIIDA 208 S++ + D L+++ Sbjct: 413 SVDGYTLPDSSRGADLLVMET 433 >gi|227488679|ref|ZP_03918995.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542323|ref|ZP_03972372.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] gi|227091340|gb|EEI26652.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181923|gb|EEI62895.1| possible metal-dependent hydrolase [Corynebacterium glucuronolyticum ATCC 51866] Length = 584 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 60/185 (32%), Gaps = 50/185 (27%) Query: 53 NTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 N ++VD G PDF + +++ ++A++ TH H DHI I Sbjct: 43 NRILLVDCGVLFPSSVEPGVDLILPDF--SYIEDRLDQVEALVITHGHEDHIGAI----P 96 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 Y L+ + + + A+ + K + R P ++ + D G Sbjct: 97 YLLRHRPDLPILASKFTCALISA------KCQEHRQRPKLIEVNELSEVDR--------G 142 Query: 158 VIEAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLD 202 H LG G + + D+ PA S + +D Sbjct: 143 PFNIRFFNVGHSIPDCLGIVLKTGAGTILHTGDIKLDQTPPDGRPTDLPAISRYGDEGID 202 Query: 203 FLIID 207 L+ D Sbjct: 203 LLMCD 207 >gi|157415932|ref|YP_001483188.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386896|gb|ABV53211.1| hypothetical protein C8J_1614 [Campylobacter jejuni subsp. jejuni 81116] gi|307748570|gb|ADN91840.1| Ribonuclease J [Campylobacter jejuni subsp. jejuni M1] gi|315931322|gb|EFV10291.1| Metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 327] Length = 662 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 170 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 224 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 225 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|78043054|ref|YP_360002.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995169|gb|ABB14068.1| metallo-beta-lactamase family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 554 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 23/127 (18%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F + L E + AVL TH H DHI G+ YFLKQ Sbjct: 33 IVIDAGLMFPEEELLGIDMVIPDMSYLIENKEKVKAVLLTHGHEDHIGGM----PYFLKQ 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP-----IVNPIVIENNDVPICMKSAGG 157 + VY + L + + P IE V + G Sbjct: 89 F-DVPVYGTRLTLGLLSAKLKEAGIPRASLNVVAPRDVLNIGPFKIEFIKVSHSIPDTVG 147 Query: 158 VIEAIPI 164 + P+ Sbjct: 148 IAVHTPV 154 >gi|54298974|ref|YP_125343.1| hypothetical protein lpp3041 [Legionella pneumophila str. Paris] gi|53752759|emb|CAH14194.1| hypothetical protein lpp3041 [Legionella pneumophila str. Paris] Length = 255 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 36/250 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G+S + P+N +S++ + N T+++D G D Sbjct: 2 TLKITFLGSGSSFAI-------------GPENY--QSNVLLEL-----ENDTLLIDAGTD 41 Query: 64 FYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQ----KRPIDVYAAPDCMKH 117 + + + D + +H H DH G++ +P + A+ +K Sbjct: 42 IKYSLRDQGLSYKDIKNIYISHLHYDHCGGLEWFALITYFDPNLSHKPCLI-ASDKIIKE 100 Query: 118 LFE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L++ S + + ++ + + +++ + ++ + S Sbjct: 101 LWDKSLSGGLSTLPHERANLSAFFDVKAVKQYEGFVWQSIKFKLLQTVHYYSEYELMPSF 160 Query: 175 GFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIEL 229 G F + + +D + P + + + D + D H SE +K Sbjct: 161 GLIFSYNKSRILFTSDTQSCPVQLISFYEESDIIFHDCETTESKSGVHAHYSELVKLPSH 220 Query: 230 INPKNAILTH 239 + K L H Sbjct: 221 LK-KKMWLYH 229 >gi|327483137|gb|AEA77544.1| Metallo-beta-lactamase family protein, RNA- specific [Vibrio cholerae LMA3894-4] Length = 438 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 LKQ +Y+ + Sbjct: 70 LAAGLKQ----PIYSTAATAE 86 >gi|271963699|ref|YP_003337895.1| hypothetical protein Sros_2169 [Streptosporangium roseum DSM 43021] gi|270506874|gb|ACZ85152.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 561 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 40/181 (22%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF + +R+++ ++AV+ TH H DHI + Sbjct: 40 EGRLLIIDCGVLFPEPDQPGIDLILPDF--EYIRDRLDDVEAVVLTHGHEDHIGAV---- 93 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+++R I V + + + K + R P + + E + Sbjct: 94 PYLLRERRDIPVVGSKLTLALIEA------KLTEHRIQPSKLEVVEGERHQFGPFECEFF 147 Query: 157 GVIEAIP------ILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKLQNLDFLII 206 V +IP + G + G FR + TD+ F + + +D L+ Sbjct: 148 AVNHSIPDALAVAVRTPAGIVLHTGDFRMDQLPSDGRLTDLGGF---ARLGAEGVDLLMS 204 Query: 207 D 207 D Sbjct: 205 D 205 >gi|153818271|ref|ZP_01970938.1| cleavage and polyadenylation [Vibrio cholerae NCTC 8457] gi|255744070|ref|ZP_05418024.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholera CIRS 101] gi|262161959|ref|ZP_06030976.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae INDRE 91/1] gi|126511160|gb|EAZ73754.1| cleavage and polyadenylation [Vibrio cholerae NCTC 8457] gi|255738335|gb|EET93726.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholera CIRS 101] gi|262028337|gb|EEY46993.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae INDRE 91/1] Length = 438 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 LKQ +Y+ + Sbjct: 70 LAAGLKQ----PIYSTAATAE 86 >gi|218563296|ref|YP_002345076.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|112361003|emb|CAL35804.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315926637|gb|EFV06017.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929677|gb|EFV08854.1| Conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 664 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 172 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 226 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 227 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 286 >gi|121613382|ref|YP_001001354.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167006243|ref|ZP_02272001.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87248964|gb|EAQ71926.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 662 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 170 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 224 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 225 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|86150517|ref|ZP_01068741.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597647|ref|ZP_01100880.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|85838969|gb|EAQ56234.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88189951|gb|EAQ93927.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|284926901|gb|ADC29253.1| putative metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 662 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 170 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 224 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 225 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|328944633|gb|EGG38794.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1087] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|327481677|gb|AEA84987.1| metallo-beta-lactamase family protein [Pseudomonas stutzeri DSM 4166] Length = 335 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 23/112 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P R S + E ++D G Sbjct: 1 MDLLFLGT--SSGTPT---------------RARNVSAL--ALLEETGKAWYLIDCGEGT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAP 112 ++LR + + A+ TH H DH +G+ GL R P+ + A Sbjct: 42 QHRLLRTPLSLHDLRAICITHVHGDHCYGLPGLLASAGMMGRKAPLTIIAPQ 93 >gi|327468464|gb|EGF13949.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK330] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|325688903|gb|EGD30911.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK115] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|325686641|gb|EGD28667.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK72] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|324989812|gb|EGC21755.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK353] gi|324992546|gb|EGC24467.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK405] gi|327459958|gb|EGF06297.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1] gi|327472492|gb|EGF17923.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK408] gi|327488853|gb|EGF20652.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1058] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKKRIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|21618317|gb|AAM67367.1| unknown [Arabidopsis thaliana] Length = 509 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 28/99 (28%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D +LG G+S P R +++ I S ++++D G Sbjct: 137 RDDMEIVLLGTGSSQ----------------PSKYRNVTAIYIDLFS----RGSILLDCG 176 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E V ++ + +H HADH G+ Sbjct: 177 EGTLGQLKRRYGLEGADEAVRNLRCIWISHIHADHHTGL 215 Score = 38.2 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 8/96 (8%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLI-----IDALKNGL-HSSHFSLSESLKKIELINPK 233 + Y D P +E + LI DAL +H + E++K Sbjct: 367 KMVYSGDTRPCPE-MVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIKVGSSAGVY 425 Query: 234 NAILTHMHVDLDYDMVLKSTP-SRVVPAFDGMQFSS 268 +LTH V+ + AFD M + Sbjct: 426 RTVLTHFSQRYPKIPVIDESHMHNTCIAFDMMSINM 461 >gi|262168029|ref|ZP_06035728.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC27] gi|262023562|gb|EEY42264.1| metallo-beta-lactamase family protein RNA-specific [Vibrio cholerae RC27] Length = 438 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Query: 40 SSLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +S+ S R +++D G D + + +DA++ TH H DHI + L Sbjct: 10 ASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFALGHVDALILTHAHIDHIGRLPWL 69 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 LKQ +Y+ + Sbjct: 70 LAAGLKQ----PIYSTAATAE 86 >gi|152994929|ref|YP_001339764.1| beta-lactamase domain-containing protein [Marinomonas sp. MWYL1] gi|150835853|gb|ABR69829.1| beta-lactamase domain protein [Marinomonas sp. MWYL1] Length = 447 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 40/194 (20%) Query: 52 SNTTVIVDTG---------PDFYM--------QVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++VD G D + + EQ + ++ TH H DH+ + Sbjct: 29 DGQWLMVDCGVSFNEPLTADDLRTSEIVCADPRFISEQKERLAGIVITHAHEDHVGAL-- 86 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + ++ + VY + L + PI+ E + + Sbjct: 87 --PFLWRRFKC-PVYTTAFTAEVLRRK----LAQVGLTDQVPIIEVKENETKKIGVFNVK 139 Query: 155 AGGVIEAIP------ILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFL--I 205 G+ ++P I GRI G ++ D AF + + L + L + Sbjct: 140 WLGLTHSVPEPYAMTIDTPAGRIFHTGDWKIDKKPILGD--AFSPAAFQALAKENILAMV 197 Query: 206 ID---ALKNGLHSS 216 D ALK+G S Sbjct: 198 CDSTNALKDGFSPS 211 >gi|17987426|ref|NP_540060.1| metal dependent hydrolase [Brucella melitensis bv. 1 str. 16M] gi|225852333|ref|YP_002732566.1| hypothetical protein BMEA_A0859 [Brucella melitensis ATCC 23457] gi|256044496|ref|ZP_05447400.1| hypothetical protein Bmelb1R_08364 [Brucella melitensis bv. 1 str. Rev.1] gi|256113352|ref|ZP_05454210.1| hypothetical protein Bmelb3E_11547 [Brucella melitensis bv. 3 str. Ether] gi|256264168|ref|ZP_05466700.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|260563850|ref|ZP_05834336.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|265990920|ref|ZP_06103477.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994758|ref|ZP_06107315.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|17983118|gb|AAL52324.1| metal dependent hydrolase [Brucella melitensis bv. 1 str. 16M] gi|225640698|gb|ACO00612.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260153866|gb|EEW88958.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|262765871|gb|EEZ11660.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263001704|gb|EEZ14279.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094386|gb|EEZ18231.1| beta-lactamase domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326408840|gb|ADZ65905.1| metal dependent hydrolase [Brucella melitensis M28] gi|326538556|gb|ADZ86771.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 558 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 69/219 (31%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L + Sbjct: 44 VSFAGPEQPGADLIL---PDIRY--LEAEKHNLRGIVITHAHEDHFGALLDLWP-----R 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA P L + +D ++PI + AG E P Sbjct: 94 LKVPVYATPFIAGLLEAK-----RQSEDS------------APEIPITIYKAGETFEVGP 136 Query: 164 IL-----QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------QNLDF 203 H + G V + D P SL + + Sbjct: 137 FKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPVIDEARFRAIGEAGVLA 196 Query: 204 LIID---ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 LI D AL+ G S + ESL + I+ + AI T Sbjct: 197 LICDSTNALREGESPSERQVGESLRELIQNARGRVAITT 235 >gi|325695440|gb|EGD37340.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK150] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|323350589|ref|ZP_08086251.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|322123271|gb|EFX94956.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|296201215|ref|XP_002747939.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform 1 [Callithrix jacchus] Length = 824 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 103/299 (34%), Gaps = 66/299 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++ +P + S + +S T++++D G + Sbjct: 480 EIVFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCGEGTF 519 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYA 110 Q+ R +D AV +H HADH G+ + ++ RP+ V A Sbjct: 520 GQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPFRPLLVVA 578 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EAIPI 164 L + C K L + P P + ++ E Sbjct: 579 PTQLKPWLQQYHNQCQKILHHISMIPAKCLQEGAEISSPAMERLISSLLRTCDLEEFQTC 638 Query: 165 LQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALKN 211 L +H + + + G++ V Y D P E+L ++ ++ LI D L+ Sbjct: 639 LVRHCKHAFGCSLVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLEDGLEE 693 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 +H + S+++ +N +L H Y V +P +V AFD M+ Sbjct: 694 EAVEKTHSTTSQAISVGMRMNAAFIMLNHFSQR--YAKVPLFSPDFNEKVGIAFDHMKV 750 >gi|197294179|ref|YP_001798720.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma australiense] gi|171853506|emb|CAM11346.1| Metallo-beta-lactamase family protein [Candidatus Phytoplasma australiense] Length = 562 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 49/143 (34%), Gaps = 28/143 (19%) Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYC 125 Q LR+ I + TH H DHI GI +L +K I ++ + L Sbjct: 64 QYLRDNESRIVGLFITHGHEDHIGGIP-----YLLKKVHIPKIFVSGIAYHLLRYK---L 115 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 + D PP+VN N D ++A I H + G GN+ Sbjct: 116 LEHKDVGALPPMVNY----NADSCYHFQNASISF----IRVNHSIPDTFGIVIKTKYGNL 167 Query: 182 AYCTDVNAF------PAESLEKL 198 Y +D P EKL Sbjct: 168 FYTSDFK-IDYTPVGPPAEYEKL 189 >gi|160881675|ref|YP_001560643.1| beta-lactamase domain-containing protein [Clostridium phytofermentans ISDg] gi|160430341|gb|ABX43904.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg] Length = 300 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 73/205 (35%), Gaps = 29/205 (14%) Query: 45 SRVSERGSNTTVIVDTG----PDFYMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +N ++VD G D + L R V +A++ THPH DHI ID + F Sbjct: 61 DCILVENNNKYMLVDGGNNDDKDVILDYLNRLGVKEFEAIIMTHPHEDHIGSIDTVIREF 120 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 +K +YA + K +D I + + Sbjct: 121 KVKK----IYAPKK---------EHTTKTYEDVLNAVIETGNTLNAPKSGEKFNFGAVTV 167 Query: 160 EAIPILQQHGRIS---SLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + + +G S+G + N C D E + LD L D LK Sbjct: 168 TFLAPSRDYGNNLNNWSIGIKVSNGKHSFVMCGDAEKEAEEDM-LATKLD-LSADVLKLS 225 Query: 213 LHSSHFSLSESLKKIELINPKNAIL 237 H S S + + ++ +NPK A++ Sbjct: 226 HHGS--DTSSTKEFVKAVNPKYAVI 248 >gi|125718930|ref|YP_001036063.1| metallo-beta-lactamase, putative [Streptococcus sanguinis SK36] gi|125498847|gb|ABN45513.1| Metallo-beta-lactamase, putative [Streptococcus sanguinis SK36] Length = 555 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGIVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|322387379|ref|ZP_08060989.1| ribonuclease Z [Streptococcus infantis ATCC 700779] gi|321141908|gb|EFX37403.1| ribonuclease Z [Streptococcus infantis ATCC 700779] Length = 309 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 84/295 (28%), Gaps = 77/295 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLF---ESFRY--------------CFKALDDRTYPPIVNPIV-----------IENN 146 + L Y + Y ++ + +E Sbjct: 103 LTSLRVSGSRLPYKIHFHEFNQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGT 162 Query: 147 DVPICMKSAGGVIEAIPILQQHGR--ISSLGFRFGNVAYCT------------DVNAFPA 192 +K+AG + ++G+ I G Y + D Sbjct: 163 LDAEKLKAAGVPFGPLFGKIKNGQDVILEDGTEIKAADYISAPRPGKIITILGDTRK-TN 221 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 S+ N D L+ ++ K + H + ++ + K +L H+ Sbjct: 222 ASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVATEAGAKRLLLNHIS 276 >gi|298372308|ref|ZP_06982298.1| ribonuclease Z [Bacteroidetes oral taxon 274 str. F0058] gi|298275212|gb|EFI16763.1| ribonuclease Z [Bacteroidetes oral taxon 274 str. F0058] Length = 304 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG G++L P +S + R ++D G Sbjct: 4 FRVTILGSGSAL----------------PTKDNFHASQVLELRGRR-----YMIDCGEGT 42 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 +++ + V ++ + +H H+DH G+ GL L + P+ +YA D L Sbjct: 43 QIKMGQYKVNVSRLNNIFISHLHSDHCIGLAGLISTMAMLGRSEPLSIYAYKDLKNILLP 102 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + Y F D V I I + + IP+ R+ + GF F Sbjct: 103 TLDY-FTDDDSFE----VIFHDINPKKKEIVYEDKALTVSTIPLKH---RVPTCGFLFE 153 >gi|147919476|ref|YP_686784.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit [uncultured methanogenic archaeon RC-I] gi|110622180|emb|CAJ37458.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit [uncultured methanogenic archaeon RC-I] Length = 636 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 19/125 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV---------LREQVLSIDAVLYTHPHADHI 89 RSS +S T +++D G + + + SIDAV+ TH H DH Sbjct: 194 RSSFLLSTP-----ETRILIDCGVNTGAESNGTPYLYVPEVSPLSSIDAVVITHAHLDHC 248 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + K +YA P Y A + PP + ++ E Sbjct: 249 G----IVPLLFKYGYEGPIYATPPTRDLSALLQLDYIEVANREGKRPPYDSALIREALKR 304 Query: 149 PICMK 153 I + Sbjct: 305 TITLN 309 >gi|114707385|ref|ZP_01440282.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506] gi|114537266|gb|EAU40393.1| metallo-beta-lactamase family protein [Fulvimarina pelagi HTCC2506] Length = 549 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 37/137 (27%), Gaps = 34/137 (24%) Query: 48 SERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 ++VD G PD + + V ++ ++ TH H DH + Sbjct: 22 GPEHDREWIMVDCGISFAGPDMPGVDLVFPDIR--FIEDHVKALKGIVITHAHEDHYGAL 79 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + VYA L + P + V + D Sbjct: 80 LDLWP-----RLKAPVYATEFTAGLLA-------AKREGEPGAPKIPVEVFKAGD----- 122 Query: 153 KSAGGVIEAIPILQQHG 169 + G E I H Sbjct: 123 RFRIGPFEIEAINVTHS 139 >gi|52843163|ref|YP_096962.1| hypothetical protein lpg2969 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630274|gb|AAU29015.1| hypothetical protein lpg2969 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 261 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 83/250 (33%), Gaps = 36/250 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G+S + P+N +S++ + N T+++D G D Sbjct: 8 TLKITFLGSGSSFAI-------------GPENY--QSNVLLEL-----ENDTLLIDAGTD 47 Query: 64 FYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQ----KRPIDVYAAPDCMKH 117 + + + D + +H H DH G++ +P + A+ + Sbjct: 48 IKYSLRDQGLSYKDIKNIYISHLHYDHCGGLEWFALITYFDPNLSHKPCLI-ASDKIINE 106 Query: 118 LFE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L++ S + + ++ + + +++ + ++ + S Sbjct: 107 LWDKSLSGGLSTLPHERANLSAFFDVKAVKQYEGFVWRSIKFKLVQTVHYYSEYELMPSF 166 Query: 175 GFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIEL 229 G F + + +D + P + + + D + D H SE +K Sbjct: 167 GLIFSYNKSRILFTSDTQSCPVQLISFYEESDIIFHDCETTESKSGVHAHYSELVKLPSH 226 Query: 230 INPKNAILTH 239 + K L H Sbjct: 227 LK-KKMWLYH 235 >gi|77407823|ref|ZP_00784576.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|77173570|gb|EAO76686.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] Length = 275 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 72/243 (29%), Gaps = 59/243 (24%) Query: 57 IVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYA 110 + D G Q+L + + + TH H DH+ G+ G R + ++ +D+Y Sbjct: 1 MFDCGEGTQRQILETTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDIYG 60 Query: 111 A----PDCMKHLF---ESFRY--CFKALDDRT------------YPPIVNPIV------- 142 M L Y F D+ + Y ++ + Sbjct: 61 PVGIKSFVMTGLRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGYRV 120 Query: 143 ----IENNDVPICMKSAGGVIEAIPILQQHGRISSL--GFRFGNVAYCT----------- 185 +E +K AG + ++G +L G Y + Sbjct: 121 VQKDLEGTLDAEALKLAGVPFGPLFGKVKNGENVTLEDGREIIAKDYISEPKKGKVITIL 180 Query: 186 -DVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILT 238 D S+ D L+ ++ + H + ++ + N K +L Sbjct: 181 GDTRK-TDASIRLALGADVLVHESTYGKGDERIAKSHGHSTNMQAADIAKQANAKRLLLN 239 Query: 239 HMH 241 H+ Sbjct: 240 HVS 242 >gi|326939403|gb|AEA15299.1| zinc-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 419 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|228964778|ref|ZP_04125885.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus thuringiensis serovar sotto str. T04001] gi|228795028|gb|EEM42527.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus thuringiensis serovar sotto str. T04001] Length = 419 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|229127115|ref|ZP_04256112.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-Cer4] gi|228656231|gb|EEL12072.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus BDRD-Cer4] Length = 417 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|218896724|ref|YP_002445135.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|218543689|gb|ACK96083.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] Length = 419 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|218235177|ref|YP_002366474.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218163134|gb|ACK63126.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 419 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|30019830|ref|NP_831461.1| zinc-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29895375|gb|AAP08662.1| Zn-dependent hydrolase (beta-lactamase superfamily) [Bacillus cereus ATCC 14579] Length = 976 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 577 KNKETKIVFDCGINRSYEDSYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 635 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 636 ---IWTTRYTKEQL 646 >gi|302556660|ref|ZP_07309002.1| metallo-beta-lactamase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302474278|gb|EFL37371.1| metallo-beta-lactamase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 198 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 48/170 (28%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 DAVL TH HADHI + VYA + Sbjct: 37 DAVLVTHEHADHI-------DVLRLAGLGVPVYAPAEA---------------------- 67 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS-------LGFRFGNVAYCTDVNA 189 + +E V + G + +H I + LG+ Y Sbjct: 68 --DIPQVEVIGVSSGTEFTAGGFRVRAVGGRHAFIHAGQPDCANLGYVLDEAVYH----- 120 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 P +SL L ++ L +H S +E++ + I P+ A H Sbjct: 121 -PGDSLHVLDQP----VETLLVPVHGSWMKTTEAIDFVNAIRPQRAFAIH 165 >gi|229824522|ref|ZP_04450591.1| hypothetical protein GCWU000282_01866 [Catonella morbi ATCC 51271] gi|229785893|gb|EEP22007.1| hypothetical protein GCWU000282_01866 [Catonella morbi ATCC 51271] Length = 254 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 42/213 (19%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL----- 100 VS + +++D G + VL ++AV+ +H HADH+ + ++ + Sbjct: 31 VSSQDRAYHILLDAGTGAARALENYLDVLELNAVIISHDHADHVADLGTIQHLLMLKPSG 90 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + P+ +Y D +PP+ IE+ + A V+E Sbjct: 91 AKHAPVPIYL------------------HDQSAFPPL----AIEDKTSQLMTYGADSVLE 128 Query: 161 AIPILQ----QHGRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIID-AL 209 P + R + + D P +E Q LI D A Sbjct: 129 CGPFRVSFCQTVHPLPCYAMRLEELETGQVLVFTADTGWCPEL-IEFSQGAYVLIADSAF 187 Query: 210 KNGLHSS--HFSLSESLKKIELINPKNAILTHM 240 N + H + SE + + + + +HM Sbjct: 188 TNERGRNEIHMTASEVAQLANQAHVRTLVASHM 220 >gi|297559625|ref|YP_003678599.1| RNA-metabolising metallo-beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844073|gb|ADH66093.1| RNA-metabolising metallo-beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 561 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 50/206 (24%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+AV+ TH H DHI G+ + L+++ I + + + + Sbjct: 65 PDF--DYIRDRLDDIEAVVLTHGHEDHIGGV----PFLLRERADIPIVGSKLTLALITAK 118 Query: 122 FRY--------CFKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQ-- 167 + + + P N+ +P + +++ GG + + Sbjct: 119 LGEHRIKPETVLVEEGERHDFGPFDLEFFAVNHSIPDALAVGIRTPGGSVLHTGDFKMDQ 178 Query: 168 ---HGRISSL-GF-RFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFS 219 GR++ L GF RFG+ + +D L+ D A + G + + Sbjct: 179 LPLDGRLTDLAGFARFGD------------------EGVDLLLSDSTNAEQPGFIVNERN 220 Query: 220 LSESLKKIELINPKNAIL----THMH 241 L+E++ K+ + K ++ +H+H Sbjct: 221 LTEAIDKVFRQSQKRIVVACFASHVH 246 >gi|228475969|ref|ZP_04060677.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|228269792|gb|EEK11272.1| conserved hypothetical protein [Staphylococcus hominis SK119] Length = 208 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 14/122 (11%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + A+L TH H DHI +D + K + VY + L + Sbjct: 40 LNQINKPLKAILLTHAHFDHIGALDDVLS-----KYDVPVYMHKEEFSFLTD------PE 88 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG---FRFGNVAYCT 185 + + + + PI + I+ H S G + F + A Sbjct: 89 KNGSSKFKQYGMPLTTSKAQPIALDEGNFTIDEFKFNVIHTPGHSPGSLTYVFDDFAVVG 148 Query: 186 DV 187 D Sbjct: 149 DT 150 >gi|169334464|ref|ZP_02861657.1| hypothetical protein ANASTE_00867 [Anaerofustis stercorihominis DSM 17244] gi|169259181|gb|EDS73147.1| hypothetical protein ANASTE_00867 [Anaerofustis stercorihominis DSM 17244] Length = 621 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 39/219 (17%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + VIVD G F + L E I + TH H DHI I Sbjct: 95 EDDIVIVDCGLKFPDEDMYGIDIVIPEFTYLIENRHKIRGLFITHGHEDHIGAIP----- 149 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN-PIVIENNDVPICMKSAGG 157 +L ++ I +Y + L LD+ IV +++ + ++ Sbjct: 150 YLLKQINIPIYGTKLTIGLLKRKLTE--HGLDESAKLHIVKQGHIVKIKGFSVEFVTSNH 207 Query: 158 VIE---AIPILQQHGRISSLG-FRFGNVAYCT-DVNAFPAESLEKL--QNLDFLIID--- 207 I A+ I G + G F+ Y D + + + + +D LI D Sbjct: 208 SIPDSCALYIKSNCGTVFHTGDFKVD---YTPVDNQQIDLQRMAAIGAEGVDLLIADSTN 264 Query: 208 ALKNGLHSSHFSLSESLKKIELINP-KNAIL----THMH 241 A + G S S+ ++ + K IL T++H Sbjct: 265 AEREGHAKSEASVGKTFNTLFKEGANKRIILATFATNVH 303 >gi|260578904|ref|ZP_05846808.1| ribonuclease J (RNase J) [Corynebacterium jeikeium ATCC 43734] gi|258602956|gb|EEW16229.1| ribonuclease J (RNase J) [Corynebacterium jeikeium ATCC 43734] Length = 582 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 35/139 (25%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF L ++ ++A++ TH H DHI I Sbjct: 42 EGRLLIIDCGVLFPSSGEPGVDLILPDF--SYLEDKWDRVEALVITHGHEDHIGAI---- 95 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + LKQ+ I + A+ + K + R P ++ +V + Sbjct: 96 PWLLKQRADIPIIASRFTCALISA------KTQEHRQRPKLI--------EVDENSHESR 141 Query: 157 GVIEAIPILQQHGRISSLG 175 G + H LG Sbjct: 142 GPFDLRFFAVNHSIPDCLG 160 >gi|118099545|ref|XP_415584.2| PREDICTED: similar to ELAC2 [Gallus gallus] Length = 812 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 102/300 (34%), Gaps = 64/300 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+++ P R SS ++ S R ++++D G + Sbjct: 460 EIVFLGTGSAI----------------PMKIRNVSSTLVNTSSTR----SLLLDCGEGTF 499 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQKRPI-----DVY--AA 111 Q+ R +D AV +H H DH G+ + + + ++ A Sbjct: 500 GQLCRHYGEQVDQVLCNIVAVFVSHMHTDHHSGLVNILMERRRAFASLGQAFSPLFLVAP 559 Query: 112 PDCMKHLFESFRYC------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 M L E C K + ++ I + + + + E Sbjct: 560 EQIMPWLHEYHNNCESILRDIKMISCQSLVKGCENIKSKTKWFITSLLESYDLAEFQTCE 619 Query: 166 QQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KN 211 QH + I G++ V Y D P +L ++ +N LI +A K Sbjct: 620 VQHCKNAFACSVIHKSGWK---VVYSGDT--MPCMALVRMGKNATLLIHEATLEDGMEKE 674 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMV---LKSTPSRVVPAFDGMQFSS 268 + +H + S++++ +N + +L H Y + + +V AFD M+ Sbjct: 675 AIEKTHSTTSQAIEIGMKMNAEFIMLNHFSQR--YAKIPLFNEDFSEKVGIAFDHMRVRL 732 >gi|53712336|ref|YP_098328.1| ribonuclease Z [Bacteroides fragilis YCH46] gi|253563627|ref|ZP_04841084.1| ribonuclease Z [Bacteroides sp. 3_2_5] gi|265762528|ref|ZP_06091096.1| ribonuclease Z [Bacteroides sp. 2_1_16] gi|56749370|sp|Q64XI2|RNZ_BACFR RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|52215201|dbj|BAD47794.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|251947403|gb|EES87685.1| ribonuclease Z [Bacteroides sp. 3_2_5] gi|263255136|gb|EEZ26482.1| ribonuclease Z [Bacteroides sp. 2_1_16] gi|301162044|emb|CBW21588.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 304 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 97/320 (30%), Gaps = 93/320 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----RDKLFMIDCGE 40 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R + ++ + +H H DH G+ GL F R + +++ + L Sbjct: 41 GAQMQLRKSRLKFSRLNHIFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L + V + + + + IP+ RI GF F Sbjct: 101 TPMLNFFCHTLAYK-----VIFHEFDTRQTSVVYEDRSMTVTTIPLQH---RIPCCGFLF 152 Query: 179 GNVA-----------------------------------------------------YCT 185 A YC+ Sbjct: 153 AEKARPNHIIRDMVDFYKVPVYELNRIKNGSDYVTPEGEVIANTRLTRPSDPPRKYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D F E +E+L +D L +A L + H + +++ + + ++ H Sbjct: 213 DTI-FRPEIVEQLSGVDLLFHEATFAESELARAKETYHTTAAQAARIALEAGVRQLVIGH 271 Query: 240 MHVDLDYDMVLKSTPSRVVP 259 + + +L S V P Sbjct: 272 FSARYEDESILLKEASAVFP 291 >gi|312864787|ref|ZP_07725018.1| ribonuclease Z [Streptococcus downei F0415] gi|311099914|gb|EFQ58127.1| ribonuclease Z [Streptococcus downei F0415] Length = 309 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 32/180 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + ++E + D G Sbjct: 1 MELQFLGTGAGQ----------------PAKARNVSSLVLKLLNEID--QVWMFDCGEGT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFL-KQKRPIDVYAAPDCMKHL 118 Q+L + + + TH H DH+ G+ G R + +++ +D+Y + Sbjct: 43 QRQILETTIKPRKVRKIFITHLHGDHVLGLPGFLASRSFQASEEQTDLDLYGPVGIRSMV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + L P + + + + +++ + A + I +G+R Sbjct: 103 LTTLK-----LSGTRLPYRIYFHEFDAHSLGKILETDKFTVYAEKLDH---TIFCVGYRV 154 >gi|310640232|ref|YP_003944990.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309245182|gb|ADO54749.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 556 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 V++D G F + L E + A++ TH H DHI GI Sbjct: 28 DQDIVVIDCGSKFPNENLPGIDLIVPDVTYLLENQDKVRALIVTHGHEDHIGGIP----- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ I V+ ++ + L + +I+ + G Sbjct: 83 YLLKQINIPVFGTKLTIELIK-------IKLKEHNLLRDAELHLIDADS-----TIDVGK 130 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F GNV + D Sbjct: 131 IQTSFFTTVHSIPDCLGVFFQTPEGNVVHTGDFK 164 >gi|225873096|ref|YP_002754555.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] gi|225792097|gb|ACO32187.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum ATCC 51196] Length = 553 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 30/143 (20%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + V++D G F L E + +L TH H DHI G+ Sbjct: 25 RWQDDIVVIDAGLMFPESELLGVDIVVPDITYLIENKEHVRGILLTHGHEDHIGGL---- 80 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + L + + VY + ++ + + +IE + Sbjct: 81 PWILSELN-VPVYGTEFTLAYV---------EGKLEEHKMLDETELIEMMP---GGRFTL 127 Query: 157 GVIEAIPILQQHGRISSLGFRFG 179 G PI H + + Sbjct: 128 GPFTIEPIRVTHSLVDCVALAIE 150 >gi|224000495|ref|XP_002289920.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975128|gb|EED93457.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1017 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 26/168 (15%) Query: 15 SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL 74 S GV + G ++ +S + ++ RG V++D P + RE + Sbjct: 554 SFGVTVLGNSHG-------FDKSGSTSGYVLWINGRG----VMIDPPPYSSATLEREGIR 602 Query: 75 --SIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 +I ++ TH HADH G + + P+ V P +++SF + AL Sbjct: 603 PRTIVGIILTHCHADHDAG-----AFQKVLTGSPVVVITTP----TIYKSFIRKYAALSS 653 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + + + + ++ G L I +GFR Sbjct: 654 LSPALLRHSHRYKPAIIGEPLRFQGATFHFTYTLH---SIPCVGFRVN 698 >gi|15789650|ref|NP_279474.1| Epf2 [Halobacterium sp. NRC-1] gi|169235363|ref|YP_001688563.1| mRNA 3'-end processing factor-like protein [Halobacterium salinarum R1] gi|10580012|gb|AAG18954.1| mRNA 3'-end processing factor homolog [Halobacterium sp. NRC-1] gi|167726429|emb|CAP13214.1| mRNA 3'-end processing factor homolog [Halobacterium salinarum R1] Length = 641 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 54/164 (32%), Gaps = 30/164 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---------PDFYMQ-VLREQVLSIDAVLYTHPHADH 88 R+S +S T ++VD G P +Q L +IDAV+ TH H DH Sbjct: 195 RASFVLSTP-----ETRILVDCGDKPGSEDEVPYLQVQEALAGGANTIDAVILTHAHLDH 249 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENND 147 K +Y + + Y A + PP + +V E Sbjct: 250 SA----FIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVAAKEGRAPPYDSEMVREA-- 303 Query: 148 VPICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 + C+ G + I + H LG F G+ Y Sbjct: 304 IKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLY 347 >gi|332159604|ref|YP_004424883.1| hypothetical protein PNA2_1965 [Pyrococcus sp. NA2] gi|331035067|gb|AEC52879.1| hypothetical protein PNA2_1965 [Pyrococcus sp. NA2] Length = 274 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 13/78 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S + + ++VD G + M+ L V IDA+ TH H DH G+ L Sbjct: 30 SALVE-----SNGYKILVDAGTEGKVLLNNMEELGIDVDDIDALFITHGHYDHTGGLKEL 84 Query: 96 RGYFLKQKRPIDVYAAPD 113 + P+++Y PD Sbjct: 85 L---KGRSEPLEIYGHPD 99 >gi|322515496|ref|ZP_08068482.1| multidrug resistance protein RomA [Actinobacillus ureae ATCC 25976] gi|322118463|gb|EFX90714.1| multidrug resistance protein RomA [Actinobacillus ureae ATCC 25976] Length = 255 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 60/223 (26%) Query: 52 SNTTVIVDT------GPDF-----YMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 S +++D DF Q + + + +DAVL TH H DH Sbjct: 2 SGQRILIDPVFGNANPLDFPLIAPRFQEAPIQLQNLPKLDAVLLTHDHYDH--------- 52 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 D +++L + L V + N++ S G Sbjct: 53 ------------LEADTIRYLADKVDRFITPLGVGARLQSWGVPVEKINELGWGDSSMLG 100 Query: 158 VIEAIPILQQHGR----------------ISSLGFRF---GNVAYCTDVNAFPAESLEKL 198 I+ QH + + G R G+ +Y AE +K Sbjct: 101 EIKLTAETAQHYTSRWTTDRNKTLWASFVLEANGQRIFWSGDTSY---GKHL-AEIGQKY 156 Query: 199 QNLDFLI--IDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D IDA G +H ++++ + +N K + H Sbjct: 157 GGFDLAFVEIDAANAGWPKTHMFSEQAVQAAQDLNAKRMLPIH 199 >gi|300309651|ref|YP_003773743.1| cAMP phosphodiesterase-like protein [Herbaspirillum seropedicae SmR1] gi|300072436|gb|ADJ61835.1| cAMP phosphodiesterases protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 15/149 (10%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPIDVYAAPDCMKHLFESFRYCFKAL 129 E++ +ID V TH H DHI + + + PI ++A ++ + + + F Sbjct: 42 ERLQAIDHVFITHAHLDHIACLPLMIDSVGDMRPTPITMHATAATLEIIRK---HIFNWH 98 Query: 130 --DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------V 181 D + P + + A G + H + ++G++ N + Sbjct: 99 IWPDFSVIPSAEQPFLRFATIEPGQTVALGQRSITALPAAH-TVPAVGYQVKNERSGASL 157 Query: 182 AYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 A+ D P ++L ++ L +LII+A Sbjct: 158 AFSGDTTVCPPLWQALNRIVQLRYLIIEA 186 >gi|296201219|ref|XP_002747941.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform 3 [Callithrix jacchus] Length = 806 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 103/299 (34%), Gaps = 66/299 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++ +P + S + +S T++++D G + Sbjct: 462 EIVFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCGEGTF 501 Query: 66 MQVLREQVLSID-------AVLYTHPHADHIHGIDGLRGYFLKQ--------KRPIDVYA 110 Q+ R +D AV +H HADH G+ + ++ RP+ V A Sbjct: 502 GQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTGLLNIL-LQRERALASLGKPFRPLLVVA 560 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI------EAIPI 164 L + C K L + P P + ++ E Sbjct: 561 PTQLKPWLQQYHNQCQKILHHISMIPAKCLQEGAEISSPAMERLISSLLRTCDLEEFQTC 620 Query: 165 LQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLI-----IDALKN 211 L +H + + + G++ V Y D P E+L ++ ++ LI D L+ Sbjct: 621 LVRHCKHAFGCSLVHTSGWK---VVYSGDT--MPCEALVRMGKDATLLIHEATLEDGLEE 675 Query: 212 GL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAFDGMQF 266 +H + S+++ +N +L H Y V +P +V AFD M+ Sbjct: 676 EAVEKTHSTTSQAISVGMRMNAAFIMLNHFSQR--YAKVPLFSPDFNEKVGIAFDHMKV 732 >gi|289770795|ref|ZP_06530173.1| beta-lactamase domain-containing protein [Streptomyces lividans TK24] gi|289700994|gb|EFD68423.1| beta-lactamase domain-containing protein [Streptomyces lividans TK24] Length = 276 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 87/264 (32%), Gaps = 35/264 (13%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MK FT+LG + PR G T + +D Sbjct: 1 MKGDLRFTVLGSASPY--PRAGNPCSGYLVEGGGGGGGGGGGGGGGGEGGGGVTRLWMDA 58 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF------LKQKRPIDVYAAP 112 G + LRE + +D + +H HADH D L Y+ ++ P+ + A P Sbjct: 59 GSGT-LGALREHIRLDQLDGIWISHLHADHCA--DLLTAYYGLLYAEVELAAPVPLLAPP 115 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 L + F P V+E +D ++ G + HG + Sbjct: 116 GIADRLAD-----FLTNGPARSPVEDAFRVVELHD---RHRARIGGLTLTSRAVSHG-MP 166 Query: 173 SLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS-----HFSLS 221 S G R +AY D P E+L +L + L+ +A + H + Sbjct: 167 SFGVRVETEDGARLAYSGDSA--PCEALTQLADDCTVLLCEADSAQAPPAGTEAVHHTPE 224 Query: 222 ESLKKIELINPKNAILTHMHVDLD 245 E+ ++TH+ L+ Sbjct: 225 EAGTTAATAGAHRLVVTHLGPLLE 248 >gi|260556525|ref|ZP_05828743.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter baumannii ATCC 19606] gi|260409784|gb|EEX03084.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter baumannii ATCC 19606] Length = 810 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + ++DTG P Q V +D V+ +H DH Sbjct: 565 QHPEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 615 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC++ + P ++ ++ + + Sbjct: 616 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCYQGQQ--WHYPELDIQILWPKEKDL 671 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 672 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 725 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 726 LGHHGSKHSS---AYDFLATLKPKLAI 749 >gi|15900575|ref|NP_345179.1| ribonuclease Z [Streptococcus pneumoniae TIGR4] gi|15902635|ref|NP_358185.1| ribonuclease Z [Streptococcus pneumoniae R6] gi|111658675|ref|ZP_01409318.1| hypothetical protein SpneT_02000181 [Streptococcus pneumoniae TIGR4] gi|116516699|ref|YP_816085.1| ribonuclease Z [Streptococcus pneumoniae D39] gi|168492832|ref|ZP_02716975.1| ribonuclease Z [Streptococcus pneumoniae CDC3059-06] gi|221231490|ref|YP_002510642.1| ribonuclease Z [Streptococcus pneumoniae ATCC 700669] gi|225854200|ref|YP_002735712.1| ribonuclease Z [Streptococcus pneumoniae JJA] gi|41017556|sp|Q8DQN1|RNZ_STRR6 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41017577|sp|Q97RW2|RNZ_STRPN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|122279029|sp|Q04LL3|RNZ_STRP2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808672|sp|B8ZMQ6|RNZ_STRPJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|254808675|sp|C1CD41|RNZ_STRZJ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|14972149|gb|AAK74819.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|15458172|gb|AAK99395.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116077275|gb|ABJ54995.1| ribonuclease Z [Streptococcus pneumoniae D39] gi|183576927|gb|EDT97455.1| ribonuclease Z [Streptococcus pneumoniae CDC3059-06] gi|220673950|emb|CAR68459.1| ribonuclease Z [Streptococcus pneumoniae ATCC 700669] gi|225722423|gb|ACO18276.1| ribonuclease Z [Streptococcus pneumoniae JJA] Length = 309 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|307331551|ref|ZP_07610663.1| RNA-metabolising metallo-beta-lactamase [Streptomyces violaceusniger Tu 4113] gi|306882822|gb|EFN13896.1| RNA-metabolising metallo-beta-lactamase [Streptomyces violaceusniger Tu 4113] Length = 561 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 33/154 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ ID ++ TH H DHI G+ + L++K I + + + + Sbjct: 70 IRDRLDDIDGIVLTHGHEDHIGGV----PFLLREKADIPLIGSKLTLALI---------- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + + P +E + + G E I H +L G + Sbjct: 116 -EAKLQEHRIRPYTLEVEE---GHRERIGPFECEFIAVNHSIPDALAVAIRTPAGMAVHT 171 Query: 185 TDVN-----------AFPAESLEKLQNLDFLIID 207 D PA + + +D L++D Sbjct: 172 GDFKMDQLPLDGRLTDLPAFAKLGEEGIDLLLVD 205 >gi|281202952|gb|EFA77153.1| hypothetical protein PPL_12361 [Polysphondylium pallidum PN500] Length = 728 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 84/272 (30%), Gaps = 83/272 (30%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 G GAS P R + + + +++D G Y Q+ Sbjct: 447 FTGTGAS----------------KPSKERNVTGHLVETIQ----GKYMLLDCGEGTYGQL 486 Query: 69 LR--------EQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVY--------- 109 +R E + ++D + +H HADH G + R +++ + Sbjct: 487 MRFFGKEKVTEILKNLDLIWISHNHADHHLGTPLMIERINQVRKGLNLPAVVLIAPSEIV 546 Query: 110 ----AAPDCMKHLFESFRY---------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + F + CF L +++ N V C + G Sbjct: 547 DWLQGLTQVLHATHNGFEFDKQDRLVDECFVRLGIKSWV---------NAHVDHCENARG 597 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG--- 212 V+E + GF+ ++Y D P + D +I +A Sbjct: 598 AVVEFV----------DDGFK---LSYSGDTR--PCENFITSGHGSDLMIHEATFEDDLQ 642 Query: 213 ---LHSSHFSLSESLKKIELINPKNAILTHMH 241 + H ++ E+L + + K +I TH Sbjct: 643 GDAIDKKHSTIGEALTVGQKMQAKTSICTHFS 674 >gi|253576741|ref|ZP_04854068.1| ribonuclease Z [Paenibacillus sp. oral taxon 786 str. D14] gi|251843951|gb|EES71972.1| ribonuclease Z [Paenibacillus sp. oral taxon 786 str. D14] Length = 312 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 89/289 (30%), Gaps = 70/289 (24%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP + R +S+ + + ER + + D G Sbjct: 1 MELYFLGTNA--GVPSL--------------ERNVTSVALRLLEER--RSLWLFDCGEGT 42 Query: 65 YMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAP------DC 114 Q+LR ++ ++ + TH H DH+ G+ GL Q +Y + Sbjct: 43 QHQILRSPLKLSKLEYIFITHLHGDHLFGLPGLISSRAYQGGDTPLVIYGPKGLKKFVET 102 Query: 115 MKHLFE-SFRYCFKALDDRTYPPI-VNPIVIENNDVPICMKSAGGVI--EAIPILQQHGR 170 L E Y + ++ + + +E + + S G + + +P Sbjct: 103 ALSLSESRINYKLELVEHQGGVLFEDDSFRVEAALLEHRIDSYGYRVIEKDLPGKLDSAV 162 Query: 171 ISSLGFRFGNV-----------------AYCTDVNAFP---------------AESLEKL 198 + G R G + + DV P L Sbjct: 163 LERCGIRPGPLYGKLKRGESVVAPNGETVHAKDVLGMPKAGRIVTILGDTRPCESVLTLA 222 Query: 199 QNLDFLIIDA-----LKNGLH-SSHFSLSESLKKIELINPKNAILTHMH 241 QN D L+ +A L H H + ++ + + +LTH Sbjct: 223 QNADMLVHEATFLHELAKTAHDYHHSTAKQAAAAAKEAGVQQLLLTHFS 271 >gi|223993299|ref|XP_002286333.1| hypothetical protein THAPSDRAFT_261063 [Thalassiosira pseudonana CCMP1335] gi|220977648|gb|EED95974.1| hypothetical protein THAPSDRAFT_261063 [Thalassiosira pseudonana CCMP1335] Length = 261 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 35/218 (16%) Query: 52 SNTTVIVDTGP---DFYMQVLRE--QVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQKRP 105 +I+D G D ++L E + + +L TH H DHI G+ +L Q Sbjct: 36 EGHRIILDLGSGAFDLGQKILGEIKPLPKLGGTILLTHTHWDHIQGLPFFVPLYLPQFDW 95 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ++ K L E Y P V + ++ I I+ Sbjct: 96 T-IFGPRGVAKSLQE----ILSGQMQHEYFP-VRLGDMPSHMKYILFSGTSTSIKVTTKY 149 Query: 166 QQHGRISSLGF------RFGNVAYCTDVNAFPAESLE---KLQNLDFLIIDA----LKNG 212 H + +LG+ R +VAY TD + E + +++D + D + G Sbjct: 150 LNH-TVLTLGYKLEEKKRGVSVAYITDHEPYDHELAKGGYFFRDVDIVFHDCQYYFSEYG 208 Query: 213 LHSS-------HFSLSESLKKIELINPKNAILTHMHVD 243 S+ H ++ ++ N K+ +L H D Sbjct: 209 PQSTQSKENWGHSTVEYVIEVAFFSNVKHLVL--FHHD 244 >gi|330813167|ref|YP_004357406.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486262|gb|AEA80667.1| metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein [Candidatus Pelagibacter sp. IMCC9063] Length = 49 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 25/38 (65%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + + ID V +TH HADHI GI+ LR +++K K+ + Sbjct: 1 MANNITEIDYVFFTHSHADHIFGINELRTFWIKNKKKL 38 >gi|240102615|ref|YP_002958924.1| Metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Thermococcus gammatolerans EJ3] gi|239910169|gb|ACS33060.1| Metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Thermococcus gammatolerans EJ3] Length = 282 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 61/175 (34%), Gaps = 31/175 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGL 95 S + + + V+VDTG D + + L IDAV TH H DH G+ Sbjct: 36 SAIVEH-----NGSKVLVDTGTDGKVLLGNMAELGFSPEEIDAVFLTHGHYDHTGGL--- 87 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 R + +++ ID++A P Y + E ++ + Sbjct: 88 RAFLEGREKGIDIHAHPGIFARRIALKPY--------RREIGIPFKKEELEELGAKFHLS 139 Query: 156 GGVIEAIPILQQHGRISSLGFRFGN-VAYCT-DVNAFPAESLEKLQNLDF-LIID 207 +E +P G I + V Y D A P L+ D LI+D Sbjct: 140 PKPVEFLPGFISSGEIERK--TWDRAVGYLVLDGKAVPDPVLD-----DTALIVD 187 >gi|303281240|ref|XP_003059912.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458567|gb|EEH55864.1| predicted protein [Micromonas pusilla CCMP1545] Length = 282 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 77/304 (25%), Gaps = 94/304 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P T R SS + E + D G Sbjct: 1 MEVVFLGT--SSGSPSFT--------------RNVSSYALRLTDEIW-----LFDCGEAT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-------RGYFLKQKR--PIDVY--AA 111 Q++R ++ I + TH H DHI G+ GL R + P +Y Sbjct: 40 QHQLMRSKLRYTKITRIFITHMHGDHIFGLPGLICALSGARAELRRVHGKDPTPLYITGP 99 Query: 112 PDCMKHLFES-----------------------------------------FRYCFKALD 130 P ++ + F Y D Sbjct: 100 PGICDYVRAAITCSRTVLGLPLIAPSARNDRNGNEGGIVVRAAPLRHPVPCFGYVVDEPD 159 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGV-------IEAIPILQQHGRISSLGFRFGNVAY 183 + + P+ K G + P G R + Sbjct: 160 QPGRMDVERATALGLPPGPLYKKLKNGEPVTTADGVTIRPEDVLGPTRP--GRRLCLLGD 217 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAIL 237 D A + D L+ ++ L+ H + + + LI +N +L Sbjct: 218 TCDSVAIAE----LARGADVLVHESTFAAFKRDEALYKGHSTSAMAGAFARLIRARNLLL 273 Query: 238 THMH 241 TH Sbjct: 274 THFS 277 >gi|195054718|ref|XP_001994270.1| GH10247 [Drosophila grimshawi] gi|193896140|gb|EDV95006.1| GH10247 [Drosophila grimshawi] Length = 754 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 36/185 (19%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++D G P+F ++ R QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDPNFIKELKR-QVHTLDAVLLSHPDAYHLGALPYLVG---KLGLN 81 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI------------CMK 153 +YA K + + F Y Y + +++ D +K Sbjct: 82 CPIYATIPVFK-MGQMFMYDLYMSHFNMY--DFDLFSLDDVDTAFDKITQLKYNQTVSLK 138 Query: 154 SAGGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDF 203 G I P+ H G I + + G ++ Y D N L++LQ Sbjct: 139 GKGYGISITPLSAGHMIGGTIWKI-VKVGEEDIVYAIDFNHKKERHLSGCELDRLQRPSL 197 Query: 204 LIIDA 208 LI DA Sbjct: 198 LITDA 202 >gi|329893758|ref|ZP_08269846.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC3088] gi|328923481|gb|EGG30795.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [gamma proteobacterium IMCC3088] Length = 267 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 71/240 (29%), Gaps = 60/240 (25%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + V++D G R + A+L TH H DHI G+ L ++ Sbjct: 18 RTRSACVLIDCGFSLKETERRLATRGLSGKDLTAILVTHEHGDHIGGVG-----VLSRRF 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY + HL ++ + + + Sbjct: 73 KLPVYMSHGT--HLSGRCEDVYQRVC-----------------FDAGDAFRINDLNIQSV 113 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLH 214 L H + V TD+ + +E D L+ ++ L+ G + Sbjct: 114 LVPHDARQPCQYVVEHQGLKVGILTDLGSVTPHVVECYGGCDHLLLEFNHDLELLRVGPY 173 Query: 215 SS-----------HFSLSESLKKIELINPK--NAILT-HMHVDLDYDMVLKSTPSRVVPA 260 H + ++ ++ ++ + ++L H+ +T + A Sbjct: 174 PPALKRRVGGALGHLNNQQAADLLKQVDHEGLRSVLIAHIS-------EQNNTREHIEAA 226 >gi|296139477|ref|YP_003646720.1| beta-lactamase [Tsukamurella paurometabola DSM 20162] gi|296027611|gb|ADG78381.1| beta-lactamase domain protein [Tsukamurella paurometabola DSM 20162] Length = 650 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 35/133 (26%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +IVD G PDF + +++ ++A++ TH H DHI + Sbjct: 127 DGKLLIVDCGVLFPEDQQPGVDLILPDFRY--IEDRIKDVEAIVLTHGHEDHIGAV---- 180 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + L+ + I V A + + K + R P ++ E+ ++ Sbjct: 181 PFLLRLRPDIPVIGAKFTLALIKA------KCDEHRLRPKLIEVREGES--------TSH 226 Query: 157 GVIEAIPILQQHG 169 G E H Sbjct: 227 GPFECEYFAVNHS 239 >gi|270291434|ref|ZP_06197656.1| metallo-beta-lactamase superfamily enzyme [Pediococcus acidilactici 7_4] gi|304385147|ref|ZP_07367493.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] gi|270280280|gb|EFA26116.1| metallo-beta-lactamase superfamily enzyme [Pediococcus acidilactici 7_4] gi|304329341|gb|EFL96561.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] Length = 558 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 48/147 (32%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F Q L I A++ TH H DHI GI FL Q Sbjct: 36 IVVDAGIKFPEDELLGIDYVIPDYQFLVANQQKIKALVITHGHEDHIGGIP-----FLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVI 159 + + +YA+P + L++ I + P S Sbjct: 91 QINVPIYASPLAAALIR-------GKLEEHGLLKTTEIHEINEDTVIKFPKTSVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP + G I G F+F Sbjct: 144 HSIPDTLGVAVHTPSGVIVETGDFKFD 170 >gi|146296588|ref|YP_001180359.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410164|gb|ABP67168.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 240 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 66/195 (33%), Gaps = 38/195 (19%) Query: 52 SNTTVIVDTGPDFYMQVLREQV-LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D G ++L I ++ +H HADH + LR YF + + ID Sbjct: 27 ESANILIDCGSGVLSKLLNYITYDDISFIICSHLHADHTSDLGVLRYYFASRGKEID--- 83 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 F + + ++ V + ++ +++ G ++ QH Sbjct: 84 --------------LFIPSEPQEEYNLIRKGVYKIKNIEENLQTQIGSVKLSFFEGQH-P 128 Query: 171 ISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKK 226 S R + D + + D L+++A E ++K Sbjct: 129 YRSFAVRIEEEGKAFVFSGDT-GYKEDFAVFCSGADLLLLNAAYT---------DEEVEK 178 Query: 227 IELINPKNAILTHMH 241 IE PK HM Sbjct: 179 IEE--PKRY---HMS 188 >gi|329956975|ref|ZP_08297543.1| ribonuclease Z [Bacteroides clarus YIT 12056] gi|328523732|gb|EGF50824.1| ribonuclease Z [Bacteroides clarus YIT 12056] Length = 304 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 96/320 (30%), Gaps = 93/320 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + +LGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHVLGCGSAL----------------PTTRHFPTSQIVNV-----RDKLFMIDCGE 40 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL 118 +Q R + ++ + +H H DH G+ GL L + + ++ +P ++ L Sbjct: 41 GAQLQFRKSRLKFSRLNHIFISHLHGDHCFGLLGLISTLNLLGRTAELHIH-SPKGLEDL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 F V + + + + IP+ R+ GF Sbjct: 100 MIPMLDFFNRQMTYK----VLFHEFGTKEAAVVYEDRSLTVTTIPLRH---RMPCCGFLF 152 Query: 177 -------------------------RFGN--------------------------VAYCT 185 R N AYC+ Sbjct: 153 AEKPGPNHILRDMIDFYQVPVYELNRIKNGADYVTPEGEVIPNARLTRPSAAPRRYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P+ + E+++ +D L DA + H + S++ + K ++ H Sbjct: 213 DTIYLPSVT-EQIKGVDLLFHEATFAEDAAPRAKETFHTTASQAARIARDAEVKKLLIGH 271 Query: 240 MHVDLDYDMVLKSTPSRVVP 259 D + VL V P Sbjct: 272 FSARYDDEQVLLDEARAVFP 291 >gi|327438196|dbj|BAK14561.1| Metal-dependent hydrolase of the beta-lactamase superfamily I [Solibacillus silvestris StLB046] Length = 262 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 34/179 (18%) Query: 38 TRSSLKIS-----RVSERGSNTTVIVDTGPD--FYMQV---LREQVLSIDAVLYTHPHAD 87 R S+ S V + ++D G Q+ + + ++ +L TH H+D Sbjct: 1 MRFSVLASGSTGNAVYVENDEHSFLIDAGLSGKKMEQLFANIDRDMKNLSGILVTHEHSD 60 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI G+ + +K I V+A + D I + D Sbjct: 61 HIKGLG-----VIARKYNIPVFANAKTWTAM------------DGLVGTIPTDLCF---D 100 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLD 202 + G ++ H + + F + TD + D Sbjct: 101 FNMETVKTFGGLDIQSFAVSHDAAEPMFYTFYENGRKLVVITDTGYVSDRMKGYISAAD 159 >gi|312127702|ref|YP_003992576.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777721|gb|ADQ07207.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 295 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V +D V+ THPH DHI +D + Sbjct: 58 SILIKTP----ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|302871963|ref|YP_003840599.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574822|gb|ADL42613.1| beta-lactamase domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 295 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V +D V+ THPH DHI +D + Sbjct: 58 SILIKTP----ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|227544435|ref|ZP_03974484.1| metallo-beta-lactamase [Lactobacillus reuteri CF48-3A] gi|300908282|ref|ZP_07125747.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] gi|227185598|gb|EEI65669.1| metallo-beta-lactamase [Lactobacillus reuteri CF48-3A] gi|300894529|gb|EFK87886.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] Length = 628 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L E I + TH H DHI G+ F Q Sbjct: 46 IVIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 100 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 101 KVNAPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 160 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 161 GVAVHTPQGTIVQTGDFKFD----LTPVGNLPGPNLQQMAKL 198 >gi|227363853|ref|ZP_03847958.1| metallo-beta-lactamase [Lactobacillus reuteri MM2-3] gi|325683063|ref|ZP_08162579.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|227071080|gb|EEI09398.1| metallo-beta-lactamase [Lactobacillus reuteri MM2-3] gi|324977413|gb|EGC14364.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 628 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L E I + TH H DHI G+ F Q Sbjct: 46 IVIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 100 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 101 KVNAPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 160 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 161 GVAVHTPQGTIVQTGDFKFD----LTPVGNLPGPNLQQMAKL 198 >gi|15807255|ref|NP_295985.1| zinc metallohydrolase [Deinococcus radiodurans R1] gi|6460072|gb|AAF11812.1|AE002059_2 zinc metallohydrolase, glyoxalase II family [Deinococcus radiodurans R1] Length = 379 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 60/158 (37%), Gaps = 22/158 (13%) Query: 49 ERGSNTTVIVDTGPD--FYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + G+ +++DTG D ++LRE + A+L TH H DH G + LK+ Sbjct: 105 DNGAGGALLIDTGLDDSHARKLLREVAALGLRPA-AILNTHSHTDHHGG----NAFILKR 159 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP-------IVNPIVIENNDVPICMKSA 155 + V+A P ++ F PP ++ P P + Sbjct: 160 FPEVPVFAPP--LEAAVIRFPVLEPLSLFGALPPREVQTKFLLAPSSPAQGVEPGEQRLG 217 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE 193 G +E + + ++ ++ R G+V Y D P Sbjct: 218 GVDVELLAVPGHAAQMYAV--RVGDVLYAADALFGPDA 253 >gi|327399661|ref|YP_004340530.1| beta-lactamase domain-containing protein [Hippea maritima DSM 10411] gi|327182290|gb|AEA34471.1| beta-lactamase domain protein [Hippea maritima DSM 10411] Length = 275 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 35/171 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM----QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ I + E TV+ DTG + ++L + ID V+ +H H DH+ G+ L Sbjct: 24 SMLIEKDGE-----TVLFDTGQTDALIHNAKLLGVDLSKIDKVILSHGHYDHVGGLKYLL 78 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y +YA P+ FR + L D + I IE+ + K A Sbjct: 79 DYTKPT-----IYAHPE-------IFRKRYSKLSDDG---NLRYIGIEDREF-FEKKGAR 122 Query: 157 GVIEAIPILQQHGRISSLGFRF---------GNVAYCTDVNAFPAESLEKL 198 V+ PI G I + GF N Y D E + L Sbjct: 123 FVLSEEPIEVAKG-IWTSGFVKMTNDFESVDKNFVYEKDGELIKDEVEDDL 172 >gi|306824922|ref|ZP_07458266.1| ribonuclease Z [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433133|gb|EFM36105.1| ribonuclease Z [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 309 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +D+Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLDIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P + + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIYFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|251778027|ref|ZP_04820947.1| ribonuclease Z [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082342|gb|EES48232.1| ribonuclease Z [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 315 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 91/328 (27%), Gaps = 94/328 (28%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 ILG + G+P + N+ +S + +++D G + Sbjct: 4 LCILGT--TGGMPMV-------------NK------YLSATLININGRKILIDCGEGTQV 42 Query: 67 QV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-----IDVYAAPDCMKHLF 119 + + SID + TH H DHI G+ GL R + + + L Sbjct: 43 AMREIGWGFKSIDLICITHSHGDHIIGLPGLLSTMGNSGRTEKVIIVGPKGIKEIVNGLN 102 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF 178 Y L+ +I+ N++ +C + + + +H + S F Sbjct: 103 IINPYLPYELEVVELENNDLKFIIDKNNMFLCEDNDKCNLILSSLEVEHSAKCLSYSFYI 162 Query: 179 GN-------------------------------------------------VAYCTDVNA 189 ++Y TD Sbjct: 163 KRRPRFSVEKASKNNVPKLLWSKLQNQEIINYNNKIYTPDLVLDNARKGIKISYVTDTRP 222 Query: 190 FPAESL--EKLQNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 S+ + ++ D I + + + + H + ES + ILTH Sbjct: 223 I---SILPQFIKYSDLFICEGTYGSDEDIDKAIKNKHMTFRESATLAKKGECNELILTHF 279 Query: 241 HVDLDYDM----VLKSTPSRVVPAFDGM 264 L K + A DG+ Sbjct: 280 SPALSAPENFLNNAKEIFHNSIVAHDGL 307 >gi|295657943|ref|XP_002789535.1| ribonuclease Z [Paracoccidioides brasiliensis Pb01] gi|226283239|gb|EEH38805.1| ribonuclease Z [Paracoccidioides brasiliensis Pb01] Length = 1816 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 102/321 (31%), Gaps = 97/321 (30%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S VP R+ S ++ + D G + Sbjct: 1307 EIITLGTGSS--VPS--------------KYRSVSGTLLTVPG----VGNYLFDCGENTL 1346 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LR+ + + V +H HADH G Sbjct: 1347 GQLQRVFSPQELRKVLQDMKVVWISHLHADHHLGTVSVIRAWYNVVYGTLSSAPSPSPEQ 1406 Query: 92 -----IDGLRGYFLKQKRPID---VYA-----------APDCMKHLFESFRYCFKALDDR 132 + R + + + I+ YA + +SFR F LD Sbjct: 1407 DLTKILSEKRLFVVSHAKMIEWLAEYAGVENFGFDKITPLEVDSSAADSFR--FSHLDQN 1464 Query: 133 TYP-------PIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQH---GRISSLGFRFG- 179 + P P+ + + P +++A G+ + H + +S F G Sbjct: 1465 SLPILNERGNPMKTLLSFNPDQCPFAAQLQAATGLSTLLTTPVMHCNGSKATSFVFPSGL 1524 Query: 180 NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ + K+ ++ LI +A ++ H + E+L+ +L+ Sbjct: 1525 KVSYSGDCR--PSRNFAKIGKDSTVLIHEATFEDDMYQDARAKRHSTSGEALQIAKLMRA 1582 Query: 233 KNAILTHMHVDLDYDMVLKST 253 KN +LTH + + Sbjct: 1583 KNIVLTHFSQRYTHKPTIPRL 1603 >gi|312196462|ref|YP_004016523.1| beta-lactamase domain protein [Frankia sp. EuI1c] gi|311227798|gb|ADP80653.1| beta-lactamase domain protein [Frankia sp. EuI1c] Length = 278 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 57/264 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG C P + + SS +S S R V++D GP Sbjct: 1 MRLTVLG----------------CRQGMPADGQASSSYMVSTGSAR-----VLLDCGPGA 39 Query: 65 YMQVLR-EQVLSIDAVLYTHPHADHIHGI------------------DGLRGYFLKQKRP 105 + +DA++ +H HADH + + LR + P Sbjct: 40 ATALSSIAHPSDLDAIIISHLHADHCYDLLTLGKTLLSGRLRDPERFPTLRDAARMEWPP 99 Query: 106 IDVYAAP---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y ++ L +F + DR++ E DV G + Sbjct: 100 VPLYVPKGGRARLEILASAFPVPSFPMLDRSFDVAFELHEYEPADV-----FTVGDCKMT 154 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-- 216 +H + + G R G+ A+ D P + Q++D + +A ++ Sbjct: 155 MHQTKHS-LPNCGTRIESPEGSFAFTGDTTYTPDL-VPLAQDVDLFLTEATLEEPDTTSH 212 Query: 217 -HFSLSESLKKIELINPKNAILTH 239 H +E+ + + +LTH Sbjct: 213 GHLCAAEAGEVAAAADVAQLVLTH 236 >gi|282163141|ref|YP_003355526.1| hypothetical protein MCP_0471 [Methanocella paludicola SANAE] gi|282155455|dbj|BAI60543.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 269 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 68/254 (26%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIH-----------------GI 92 +++D GP ++ L + +D ++ +H H DH + G+ Sbjct: 31 DGNAILLDPGPGCLVRCVELGLKPSRLDCIVLSHRHIDHSNDVNIMTEAMSGGGFKPKGM 90 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L+ P+ K++ + F + Y +N + IE Sbjct: 91 LIAPWDCLEGNDPV---VLKYVRKYIRNN---VFALKEGAKYR--LNGVSIEGA------ 136 Query: 153 KSAGGVIEAIPILQQHGRISSLG--FRFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 + +H + S FRF N + Y D F E +++ D+LII+ Sbjct: 137 -----------LRLKHSDVESYAIKFRFENKTLGYIADTKYF-DGIGEAMKDCDYLIINM 184 Query: 209 LKNGLHS--SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP------- 259 ++ H + K +++ P AIL H + V+K+ P + Sbjct: 185 VRITYDDRFQHLIPGDVEKVLKVAKPGMAILNHFGM-----QVVKAHPRDIAFRIEKTTG 239 Query: 260 -----AFDGMQFSS 268 A DGM+ Sbjct: 240 VKTIAAEDGMRLKL 253 >gi|221124682|ref|XP_002157795.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 346 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 42/323 (13%), Positives = 78/323 (24%), Gaps = 109/323 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G P R+ S L + + + D G Sbjct: 1 MELHFLGTG----------------SAYPSPNRSSSCLALRHNGDIW-----VFDCGEGS 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLK-QKRPIDVYAAPDCMKHL 118 +Q + ++ I + TH H DH+ G+ GL G+ +D+Y + Sbjct: 40 QIQFQKSKLRSSRISKIFITHLHGDHLFGLPGLLCTIGFNQNDTIDHVDIYGPIGLKNFV 99 Query: 119 FESFR---------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV----- 158 S D ++P + ++ V Sbjct: 100 RASLLLSCSLLSFSYSVHEIMIPSFQDISKVELPLHPNETKGKEIQFEYDGYFDVCQTTF 159 Query: 159 IEAIPILQQHGRISSLGF-------------------------RFGN------------- 180 + I + +H I +G+ FG Sbjct: 160 LTVIAVPLKHS-IPCIGYVLKEKDLPGKLNTLFLNSKGVPAGPLFGKLKMGEPVTLANGD 218 Query: 181 ----------------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HF 218 + D E + + D L+ +A H Sbjct: 219 IILPEQCLGPAKKGRKIVILGDTCN-SDEIIPFAIDADILVHEATNENADEKKSVEHGHS 277 Query: 219 SLSESLKKIELINPKNAILTHMH 241 + + + L+ + I+TH Sbjct: 278 TAGMAGRFAALVRARTLIITHFS 300 >gi|89101083|ref|ZP_01173921.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] gi|89084195|gb|EAR63358.1| metallo-beta-lactamase family protein [Bacillus sp. NRRL B-14911] Length = 557 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 45/182 (24%) Query: 35 NRRTRSSLKISRVSERGSNTT-----------VIVDTGPDFYMQ-------------VLR 70 N R S+++ + G ++D G F L Sbjct: 2 NNRKNESIRLIALGGVGEIGKNMYLAEVDEDLYVIDAGLMFPENEMLGIDIVIPDVSYLV 61 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + I + TH H DHI + Y LK K + VY + + Sbjct: 62 QNKDRIRGIFLTHGHEDHIGAL----SYVLK-KVSVPVYGTKLTLALAKAKMK------- 109 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 ++ Y I I N+D + + + H S+G G++ Y D Sbjct: 110 EQDYRGKAELIEI-NSDSVLEFEHSSVSF----FRTNHSIPDSVGICIHTSEGSIVYTGD 164 Query: 187 VN 188 Sbjct: 165 FK 166 >gi|148544728|ref|YP_001272098.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184154080|ref|YP_001842421.1| putative metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|148531762|gb|ABQ83761.1| RNase J1 [Lactobacillus reuteri DSM 20016] gi|183225424|dbj|BAG25941.1| putative metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] Length = 618 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L E I + TH H DHI G+ F Q Sbjct: 36 IVIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 91 KVNAPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 151 GVAVHTPQGTIVQTGDFKFD----LTPVGNLPGPNLQQMAKL 188 >gi|327439403|dbj|BAK15768.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Solibacillus silvestris StLB046] Length = 554 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 51/150 (34%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VIVD G F Q L E I A++ TH H DHI GI +L + Sbjct: 33 VIVDCGGKFADQSLLGVDLIIPDLSYLEENKHKIKALVVTHGHEDHIGGIP-----YLLR 87 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 K + +YA+ + + L + + + N +IE N K + Sbjct: 88 KINMPIYASRFTLGLI---------ELKLKEHKLLRNTELIEINAES---KINFDQLSLT 135 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H LG F G V + D Sbjct: 136 FFKTSHSIPDCLGIVFHTPEGKVIHTGDFK 165 >gi|262202124|ref|YP_003273332.1| beta-lactamase [Gordonia bronchialis DSM 43247] gi|262085471|gb|ACY21439.1| beta-lactamase domain protein [Gordonia bronchialis DSM 43247] Length = 595 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ +DAV+ TH H DHI I + L+ + I V + + + Sbjct: 96 PDFRY--IEDRMDDVDAVVLTHGHEDHIGAI----PFLLRLRGDIPVVGSKFTLALV--- 146 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + + P ++E + G + H Sbjct: 147 --------EAKCREHRLRPRLVEVREGERTTH---GPFDCEYFAVNHS 183 >gi|163850502|ref|YP_001638545.1| beta-lactamase domain-containing protein [Methylobacterium extorquens PA1] gi|240137567|ref|YP_002962038.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens AM1] gi|254560038|ref|YP_003067133.1| hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens DM4] gi|163662107|gb|ABY29474.1| beta-lactamase domain protein [Methylobacterium extorquens PA1] gi|240007535|gb|ACS38761.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens AM1] gi|254267316|emb|CAX23148.1| putative hydrolase, metallo-beta-lactamase superfamily [Methylobacterium extorquens DM4] Length = 557 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 69/227 (30%), Gaps = 55/227 (24%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSID-----------------AVLYTHPHADHI 89 + ++VD G F + E + ID A+ TH H DHI Sbjct: 28 IGPEKQRKWIMVDCGMGFAGE---EGLPGIDLMFPDLTFIEERKKDLLAIFITHAHEDHI 84 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 I L + VYA L P V+ I+ Sbjct: 85 GAISELWP-----RIKAPVYATRFAKNLLETR-------RLSEPGAPKVDLREIKPGR-- 130 Query: 150 ICMKSAGGVIEAIPILQ------------QHGRISSLG-FRFGNVAYCTDVNAFPAESLE 196 + IE +P+ +HG + G ++ + D E+ Sbjct: 131 -RVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDST--SPEAFT 187 Query: 197 KL--QNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILT 238 L + + LI D+ L+ G S +S +L K+ P +T Sbjct: 188 ALGDEGILALICDSTNVLREGRSPSESEVSATLHKLIENAPHRVAVT 234 >gi|88608757|ref|YP_506699.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu str. Miyayama] gi|88600926|gb|ABD46394.1| metallo-beta-lactamase family, beta-CASP subfamily [Neorickettsia sennetsu str. Miyayama] Length = 542 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 52/179 (29%), Gaps = 25/179 (13%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++D G F + E+ + A++ TH H DH + + Sbjct: 28 GRWIMIDCGAGFADAELPGIDIVVADISFIEERKDDLLAIIITHIHEDHCGALP-----Y 82 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L + + VY L + P + + I M + + Sbjct: 83 LWDRLAVPVYTTQFTANFLLKKIGRDKVQFPIHVVEPGKLLHLGDFTLEFINMTHSVPEM 142 Query: 160 EAIPILQQHGRISSLG-FRFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 AI I + G ++ + V D S + + ++ D+ H Sbjct: 143 NAIAIHTADKVVIHSGDWKIDDDPVVGKTCDFKRLEELSE---KGVLAMVCDSTNVFSH 198 >gi|15668476|ref|NP_247274.1| hypothetical protein MJ_0301 [Methanocaldococcus jannaschii DSM 2661] gi|2495901|sp|Q57749|DHPSL_METJA RecName: Full=7, 8-dihydropterin-6-methyl-4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate synthase gi|1591024|gb|AAB98288.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 294 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 16/112 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I V G ++ DT F M++L SID ++ +H H DH G+ Sbjct: 34 SFLIE-VESNGIKKRILFDTATYAEPILFNMKLLNINPKSIDMIILSHNHFDHTGGLF-- 90 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 G + + I ++A P F+ F + +N + E+ + Sbjct: 91 -GIMKEINKEIPIFAHP-------NIFKVSFATEPEFMLAGTLNKTLKEDIE 134 >gi|331270784|ref|YP_004397221.1| metallo beta-lactamase family protein [Clostridium botulinum BKT015925] gi|329127502|gb|AEB77445.1| metallo beta-lactamase family protein [Clostridium botulinum BKT015925] Length = 583 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 28/206 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + +++D G + +++ ++ V +D V+ THPH DHI G+D + Sbjct: 235 SILVQQ-----DGHNMLIDAGNNEDDKLVVDYLKKQGVKKLDYVIGTHPHEDHIGGLDKV 289 Query: 96 RGYF----LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 F L + I A K + S + + + P++ Sbjct: 290 IDNFDVDTLLMSKKI---ANTKTFKDVVTS----AQKKNLKITEPVIGTNYNLGKATFTI 342 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + + + L F + + D A + NLD L D LK Sbjct: 343 LAPKDKTYQGT---NNYSIVQKLRFGNKSFIFTGDAEAISEMEMVN-ANLD-LQADVLKV 397 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++ ++ +NP A++ Sbjct: 398 GHHGSKTSTCQA--FLDKVNPTYAVI 421 >gi|222529226|ref|YP_002573108.1| beta-lactamase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456073|gb|ACM60335.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 295 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V +D V+ THPH DHI +D + Sbjct: 58 SILIKTP----ENKFVLIDSGPNSAEQDVLQTLDRLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|196228264|ref|ZP_03127131.1| response regulator receiver protein [Chthoniobacter flavus Ellin428] gi|196227667|gb|EDY22170.1| response regulator receiver protein [Chthoniobacter flavus Ellin428] Length = 450 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 78/261 (29%), Gaps = 55/261 (21%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + + D G VL+ Q + + TH H DHI G ++ I + Sbjct: 194 GDEQFVFDAGSGIRDLGFDVLQSQRRKLH-LFVTHTHWDHIQGFPFFAPAYVPGFE-ITI 251 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPI--------VNPIVIENNDVPICMKSAGGVIE 160 Y A K L F+ DR Y P+ + + N + I Sbjct: 252 YGAEGFGKDLKS----VFRGQLDREYFPVQMEDMQSYLQFRQLAVNPMTIGSARISWEFA 307 Query: 161 AIPILQQHGRISSLGFRFGNV-------AYCTDVNAFPAE---------SLEKLQNLDFL 204 P +I G + V Y + ++ L + D + Sbjct: 308 QHPGATVGYKIEIDGKKIVWVPDNEFLQGYTGSPEDLTRDHPLVVPYGRMIDFLSDADVV 367 Query: 205 IIDALKN-GLHSS-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---- 254 I +A + H S+S + ++L +N ++TH D +D T Sbjct: 368 IHEAQYTCEEYPKKVRWGHSSVSNACALMKLAGVRNWVVTH--HDPMHDDAFLDTKLQLT 425 Query: 255 ----------SRVVPAFDGMQ 265 V +DGM Sbjct: 426 RQIFERMGHEMYVTHGYDGMT 446 >gi|150376724|ref|YP_001313320.1| beta-lactamase domain-containing protein [Sinorhizobium medicae WSM419] gi|150031271|gb|ABR63387.1| beta-lactamase domain protein [Sinorhizobium medicae WSM419] Length = 276 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 21/174 (12%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK----Q 102 R +I D G ++ E V + D V +TH H DHI G+ + + + Sbjct: 37 RCGKEVMIFDAGSGLREAGLSLMSEGVSAFD-VFFTHTHYDHIIGLPYFKPIYRCSSAVR 95 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 ++ + + E + I + + P S + Sbjct: 96 FWSGHLHGKMTTAEMINEFM----RPPWFPVGTGICQASLDTVDFRPGETLSPRKDVSIR 151 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 + H +G+R VA D P L+ + D +I D Sbjct: 152 TMSLVHPG-GCIGYRVEWGGRAVALIYDTEHEPGILDPVLLDFIAGADLMIYDC 204 >gi|54295809|ref|YP_128224.1| hypothetical protein lpl2899 [Legionella pneumophila str. Lens] gi|53755641|emb|CAH17143.1| hypothetical protein lpl2899 [Legionella pneumophila str. Lens] Length = 255 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 83/250 (33%), Gaps = 36/250 (14%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G+S + P+N +S++ + N T+++D G D Sbjct: 2 TLKITFLGSGSSFAI-------------GPENY--QSNVLLEL-----ENDTLLIDAGTD 41 Query: 64 FYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQ----KRPIDVYAAPDCMKH 117 + + + D + +H H DH G++ +P + A+ + Sbjct: 42 IKYSLRDQGLSYKDIKNIYISHLHYDHCGGLEWFALITYFDPNLSHKPCLI-ASDKIINE 100 Query: 118 LFE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L++ S + + ++ + + +++ + ++ + S Sbjct: 101 LWDKSLSGGLSTLPHERANLSAFFDVKAVKQYEGFVWRSIKFKLVQTVHYYSEYELMPSF 160 Query: 175 GFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIEL 229 G F + + +D + P + + + D + D H SE +K Sbjct: 161 GLIFSYNKSRILFTSDTQSCPVQLISFYEESDIIFHDCETTESKSGVHAHYSELVKLPSH 220 Query: 230 INPKNAILTH 239 + K L H Sbjct: 221 LK-KKMWLYH 229 >gi|324325809|gb|ADY21069.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 419 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|310642795|ref|YP_003947553.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309247745|gb|ADO57312.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 252 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG--LRGYFLKQKRP 105 +++D G + + + V IDA+L TH HADH+ G++ + L +++P Sbjct: 26 DSGEGKLLIDCGTTASLALHQMGVPLPDIDAILITHIHADHVGGLEEFGFQMNILHRRKP 85 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS------AGGVI 159 + +Y A + L+E L + + + +V + G + Sbjct: 86 L-LYIAEPLIHPLWE------HTLKGGMSQQGMIDKLEDVFEVNVITPGVSTTLVPGIQV 138 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 E IP G+ S F + Y D+ P Sbjct: 139 ELIPTQHIPGKHSYSLFINDRLFYSADMVFDPD 171 >gi|309799913|ref|ZP_07694117.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] gi|308116440|gb|EFO53912.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis SK1302] Length = 437 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLTEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ N GG I H SLG GN+ Y Sbjct: 105 GNDS-VKKFDDFHVIDEN----TEIDFGGTI-VSFFRTTHSIPESLGVVLKTSEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|218529199|ref|YP_002420015.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|218521502|gb|ACK82087.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] Length = 557 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 69/227 (30%), Gaps = 55/227 (24%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSID-----------------AVLYTHPHADHI 89 + ++VD G F + E + ID A+ TH H DHI Sbjct: 28 IGPEKQRKWIMVDCGMGFAGE---EGLPGIDLMFPDLTFIEERKKDLLAIFITHAHEDHI 84 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 I L + VYA L P V+ I+ Sbjct: 85 GAISELWP-----RIKAPVYATRFAKNLLETR-------RLSEPGAPKVDLREIKPGR-- 130 Query: 150 ICMKSAGGVIEAIPILQ------------QHGRISSLG-FRFGNVAYCTDVNAFPAESLE 196 + IE +P+ +HG + G ++ + D E+ Sbjct: 131 -RVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDST--SPEAFT 187 Query: 197 KL--QNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAILT 238 L + + LI D+ L+ G S +S +L K+ P +T Sbjct: 188 ALGDEGILALICDSTNVLREGRSPSESEVSATLHKLIENAPHRVAVT 234 >gi|194466987|ref|ZP_03072974.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194454023|gb|EDX42920.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 618 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L E I + TH H DHI G+ F Q Sbjct: 36 IVIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 91 KVNAPIYAGPFAMSLIKGKLEEKHLLRNAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 151 GVAVHTPQGTIVQTGDFKFD----LTPVGNLPGPNLQQMAKL 188 >gi|311744170|ref|ZP_07717975.1| metallo-beta-lactamase [Aeromicrobium marinum DSM 15272] gi|311312525|gb|EFQ82437.1| metallo-beta-lactamase [Aeromicrobium marinum DSM 15272] Length = 559 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 24/136 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + G + ++ D GP +R+++ I AV+ TH H DHI G+ Y Sbjct: 48 CGVLFPEEHHPGVDL-ILPDFGP------IRDRLDDIVAVVLTHGHEDHIGGL----PYL 96 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L+++ I V + + L L + + IV E + G Sbjct: 97 LRERGNIPVAGSQLTLAFLD-------PKLKEHRLKEVPKHIVSEGDIETF------GPF 143 Query: 160 EAIPILQQHGRISSLG 175 E + H +L Sbjct: 144 ECEFVAVNHSIPDALA 159 >gi|237719311|ref|ZP_04549792.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229451171|gb|EEO56962.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 264 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 35/213 (16%) Query: 53 NTTVIVDTGPD--FYMQVLREQ--VLSIDAVLYTHPHADHIHG------IDGLRGYFLKQ 102 T ++VD G Q+ + + SI + TH H DHI G I R Sbjct: 25 ETVLLVDAGGGNGILNQLEKVDMLIDSIHDMFVTHAHTDHILGAVWMIRIIAQRASNGHY 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 VY + L + + +N V E +V G + Sbjct: 85 SGRFRVYGHDKVLMVL----DQICRMTLPVSVMGAINKYV-EFCEVKHGDTLRLGDLNVQ 139 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFP--------AESLEKLQNLDFLIIDAL----- 209 + GFR A D + ++ + +D+L+ +A Sbjct: 140 FFDIASTKEKQFGFR----ALLPDGKSLACLGDEPYNEQNRAYAEGVDWLLCEAFCLYAD 195 Query: 210 --KNGLHSSHFSLSE-SLKKIELINPKNAILTH 239 + + H S ++ + + + + KN +L H Sbjct: 196 RERFKPYEKHHSTAQDAGRLAQQLGVKNLLLYH 228 >gi|210615512|ref|ZP_03290639.1| hypothetical protein CLONEX_02855 [Clostridium nexile DSM 1787] gi|210150361|gb|EEA81370.1| hypothetical protein CLONEX_02855 [Clostridium nexile DSM 1787] Length = 303 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 77/266 (28%), Gaps = 78/266 (29%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++++D G + ++E+ ID + +TH H DHI G+ GL Sbjct: 19 WLTSLMTRFNGSSLLIDCGEGTQI-AIKEKGWSFKPIDVICFTHYHGDHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +K P+ + ++ + + R L IE + G Sbjct: 78 GNADRKEPLTLIGPKG-LERVVTALRVIAPELP-------FEIKFIEITQPEQTFELNGY 129 Query: 158 VIEAIPILQQHGRISSLGFRFG-------------------------------------- 179 ++A H + G+ Sbjct: 130 RLKA--FRVNH-NVVCYGYTIEIDRAGKFDLERALSQEIPKQYWKHLQKGETIESDGKTY 186 Query: 180 -------------NVAYCTDVNAFPAESL-EKLQNLDFLIIDALKNGLHS-------SHF 218 + YCTD P S+ E + D I + + H Sbjct: 187 TPEMVLGAPRKGLKLTYCTDTR--PTNSIRENAKGSDLFICEGMYGEKEKAAKAIEYKHM 244 Query: 219 SLSESLKKIELINPKNAILTHMHVDL 244 + E+ + + LTH L Sbjct: 245 TFYEAATLAKEAEVEEMWLTHYSPSL 270 >gi|168699960|ref|ZP_02732237.1| ribonuclease Z [Gemmata obscuriglobus UQM 2246] Length = 334 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 R + +V S T ++ D G Q+ ++ +D + ++H H DH+ G D Sbjct: 13 RDNALFVKVDTGQSQTRLLFDCGDGCPHQLGPSELREVDHLCFSHLHMDHVAGFDLFFRI 72 Query: 99 FL-KQKRPIDVYAAPDCMKHLFESFR 123 + + ++ + + FR Sbjct: 73 NFDRTAKENRIWVPHGSAEIIQNRFR 98 >gi|168216943|ref|ZP_02642568.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|182380886|gb|EDT78365.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 284 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D+G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDSGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDIFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|116511138|ref|YP_808354.1| mRNA degradation ribonuclease J1/J2enzyme [Lactococcus lactis subsp. cremoris SK11] gi|116106792|gb|ABJ71932.1| RNase J1 [Lactococcus lactis subsp. cremoris SK11] Length = 561 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E + I + TH H DHI GI FL + Sbjct: 37 IIIDAGIKFPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y + ++ ++ + Sbjct: 92 QANIPIYAGPLSLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I + G F+F Sbjct: 152 GIVVNTP----QGKIVATGDFKFD 171 >gi|187931756|ref|YP_001891741.1| metallo-beta-lactamase superfamily protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712665|gb|ACD30962.1| metallo-beta-lactamase superfamily protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 320 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 61 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENLP 120 Query: 108 VYAA------PDCMKHLFESFRY---CFKALDD-----RTYPPIVNPIV-IENNDVPICM 152 P L F F L +P ++P++ I+ + Sbjct: 121 FSGPTHSGLFPSTTDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTK 180 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L + G + + + F ++ +N D Sbjct: 181 VFSNDEFTVWALGIPKGDVPTLAYEIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 240 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + ++ +NPK +L+H Sbjct: 241 LMMPMPIDESADAAGSFLHAKPSVIGQA---AAAVNPKALVLSH 281 >gi|257871081|ref|ZP_05650734.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257805245|gb|EEV34067.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 560 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 16/160 (10%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + R ++ +DT PDF L E + V TH HAD I + YF Sbjct: 28 IFVLDCGVRYPENELLGIDTVIPDF--TYLEENADRVAGVFLTHGHADAIGAL----PYF 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L+ P+ V+ ++ + + + I I+ I I Sbjct: 82 LEN-VPVPVFGTELTIELAKLTVAKNEATKKFKDFHIIDEHSEIDFGHATISFFRTTHSI 140 Query: 160 ---EAIPILQQHGRISSLG-FRFGNVA---YCTDVNAFPA 192 I + G I G F+F A Y TD Sbjct: 141 PDSVGISVKTSAGNIVYTGDFKFDQTAIPMYQTDFGRLAE 180 >gi|228921804|ref|ZP_04085119.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837809|gb|EEM83135.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 557 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 S+ VI+D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SDDIVIIDCGSKFPDESLLGIDLIIPDVTYLQENKDKIRGLIVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + L + IVI++ + G Sbjct: 85 FLKQLN-VPIYATKLTL-------GLIGIKLKEHKLQDSTQLIVIDSESL-----IEFGQ 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F G V + D Sbjct: 132 INLSFFKTNHSIPDCLGIAFHTPEGTVVHTGDFK 165 >gi|125623174|ref|YP_001031657.1| putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|124491982|emb|CAL96909.1| Putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|300069921|gb|ADJ59321.1| putative Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris NZ9000] Length = 561 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E + I + TH H DHI GI FL + Sbjct: 37 IIIDAGIKFPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y + ++ ++ + Sbjct: 92 QANIPIYAGPLSLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I + G F+F Sbjct: 152 GIVVNTP----QGKIVATGDFKFD 171 >gi|260893634|ref|YP_003239731.1| beta-lactamase domain protein [Ammonifex degensii KC4] gi|260865775|gb|ACX52881.1| beta-lactamase domain protein [Ammonifex degensii KC4] Length = 274 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 7/67 (10%) Query: 52 SNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++ D G +L + +A++ +H H DH G+ R R I Sbjct: 30 EGHKILFDAGQRGAVVSNAHLLGIDLRGAEAIVLSHGHYDHTGGL---RAVLEYIGRRIP 86 Query: 108 VYAAPDC 114 VYA PD Sbjct: 87 VYAHPDV 93 >gi|325570536|ref|ZP_08146262.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325156382|gb|EGC68562.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 206 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 39/116 (33%), Gaps = 24/116 (20%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP-------DCMKHLFESFRYCFKALD 130 A+L TH H DHI +D LR Y+ I VY +P D MK+L Sbjct: 49 AILLTHTHYDHIGAVDHLRDYY-----QIPVYVSPLEQGWLSDPMKNLSGRHPEL----- 98 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 + E + AG + + I S+ F F N D Sbjct: 99 -----GTITARPAEFELELKEYEIAGMSFKVVATPGH--SIGSVSFIFDNFVVSGD 147 >gi|291543857|emb|CBL16966.1| conserved hypothetical protein [Ruminococcus sp. 18P13] Length = 686 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 64/220 (29%), Gaps = 49/220 (22%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +N ++D G F L V + V+ TH H DHI G+ Sbjct: 156 ECANDMFLIDCGLAFPDSDMLGVDIVIPDFTYLERNVDKLRGVVLTHGHEDHIGGL---- 211 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +L +K I VY + + L + V V++ Sbjct: 212 -AYLLKKINIPVYGTQLTLALVE-------GKLREHRLLGKVKLNVVKPRQ-----TVKF 258 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA---------FPAESLEKLQNLDF 203 G + I H ++G G + + D +L + Sbjct: 259 GCMAVEFIRVNHSIPDAVGMAIHTPAGVIVHTGDFKVDYTPINGEIIDLARFAELGSKGV 318 Query: 204 LII-----DALKNGLHSSHFSLSESLK-KIELINPKNAIL 237 L + +A + G S ++ ES + K I+ Sbjct: 319 LALLSDSTNAERPGFTPSERTVGESFEKLFAKAEGKRIII 358 >gi|302875010|ref|YP_003843643.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307690372|ref|ZP_07632818.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302577867|gb|ADL51879.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 280 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 82/220 (37%), Gaps = 23/220 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR- 96 S+ I + +++D G + Y + + + ++ ++ THPHADHI I + Sbjct: 46 SILIQT-----GSNNILIDAGENDNSTYNYLKTQGITKLNYIIVTHPHADHIGNIAKIIN 100 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + + A+ ++ + T P + + I I N + ++ Sbjct: 101 SFSVGTFYAPKITASSAVYTNMVTALS---NKGLKITVPSVGSKITIGNATLQFLAPNSS 157 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + + ++ L + + + D + + LD D +K G H S Sbjct: 158 KYSD----TNNYSIVTKLTYGNKSFIFMGDAETLSEGEI-LAKQLDV-SADVIKIGHHGS 211 Query: 217 HFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 S S+S ++ +NPK AI++ + D L Sbjct: 212 TSSTSKS--FLKAVNPKYAIISVGEGNSYNHPADETLAKL 249 >gi|289937656|ref|YP_003482258.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] gi|289533347|gb|ADD07696.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 545 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 14/142 (9%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + +E G+ V+VD G + ++ + ++A+L TH H DH + Sbjct: 16 STLLRFTTEDGTRACVLVDAGDNVDVESMLGDDEYLNAILLTHAHIDHYQTL------AR 69 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y +P L +S D+ V +E D + S +E Sbjct: 70 NVHHSASIYTSPATATVLEQSLPEA--QKDNNLGDISVALDALEPIDDWTSILS---TLE 124 Query: 161 AIPILQQHGRISSLGF--RFGN 180 P+ H + GF RF + Sbjct: 125 VRPVAAGHTP-GAAGFILRFRD 145 >gi|218296615|ref|ZP_03497333.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] gi|218242928|gb|EED09461.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] Length = 575 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 67/193 (34%), Gaps = 20/193 (10%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP---DCMKHLFES 121 + L E I A + TH H DHI G+ + ++ + +Y A +K E Sbjct: 77 RVDFLIENRHRIKAWVLTHGHEDHIGGLPFILPMVFGKESQVPIYGARLTLGLLKGKLEE 136 Query: 122 FR-----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F + K + + ++ + + G++ PI G I G Sbjct: 137 FGLRPGSFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGLVIRTPI----GTIVHTGD 192 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 F+ V+ + + + LI D A + G S +++ L ++ P Sbjct: 193 FKLDATPIDGKVSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEMEIAKELDRVIGRAP 252 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 253 GRVFVTTFASHIH 265 >gi|15672272|ref|NP_266446.1| hypothetical protein L89418 [Lactococcus lactis subsp. lactis Il1403] gi|281490831|ref|YP_003352811.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] gi|12723153|gb|AAK04388.1|AE006266_7 hypothetical protein L89418 [Lactococcus lactis subsp. lactis Il1403] gi|281374589|gb|ADA64109.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis KF147] gi|326405868|gb|ADZ62939.1| mRNA degradation ribonuclease, metallo-beta-lactamase superfamily [Lactococcus lactis subsp. lactis CV56] Length = 560 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E + I + TH H DHI GI FL + Sbjct: 37 IIIDAGIKFPEDDLLGVDYVIPDYTYIVENIDRIKGLFITHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y + ++ ++ + Sbjct: 92 QANIPIYAGPLSLALIRGKLEEHGLLRDAKLYEIHADSVIKFNHLSLDFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I + G F+F Sbjct: 152 GIVVNTP----QGKIVATGDFKFD 171 >gi|327439684|dbj|BAK16049.1| Zn-dependent hydrolase, including glyoxylase [Solibacillus silvestris StLB046] Length = 214 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 15/124 (12%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR+ L+ A+L TH H DHI G+D +R + I +Y ++ L + + Sbjct: 42 LRKNGLNPLAILLTHTHFDHIGGVDAVRAIY-----NIPLYVHEKEVEWLADPMK----- 91 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG---FRFGN--VAY 183 Y + N I+ + + I K I A H S G F F + A Sbjct: 92 NGSGKYAELPNYIIKKPDGEHIIRKEGEMTIGAFTFTVAHTPGHSPGSVSFIFKDDAFAI 151 Query: 184 CTDV 187 D Sbjct: 152 VGDT 155 >gi|302835740|ref|XP_002949431.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f. nagariensis] gi|300265258|gb|EFJ49450.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f. nagariensis] Length = 463 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTG------PDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + V++D G D MQ L + I+A++ TH H DHI + + Sbjct: 54 DRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWKDRIEALIITHGHEDHIGAL----PWV 109 Query: 100 LKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + P ++A+ M+ + Y I+ + K G Sbjct: 110 VPALDPGTPIFASSFVMELIKRRL---------TEYSLWDEKRFIK---FDMRQKFQAGP 157 Query: 159 IEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 158 FEIEPVRVTHSIPDCCG 174 >gi|284035970|ref|YP_003385900.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283815263|gb|ADB37101.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 255 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 52/231 (22%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V++D G ++ R + ++ A+ +H H+DHI GI L +K I Sbjct: 22 EREAVLIDAGISCRETERRMERLGLSLQTVKAIFVSHEHSDHIRGIPQLA-----KKHQI 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ P + + P P+ P+ + G + + Sbjct: 77 PVFITPGTLNN--------------SGLPQTGFPLRPLRAYEPVWI----GELCITAFPK 118 Query: 167 QHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H F R V TD+ A + + ++A L+ G + Sbjct: 119 HHDASDPHSFLVAGRDTKVGVFTDIGAPCEHLIHHFKQCHAAFLEANYDEDMLEKGRYPY 178 Query: 216 ----------SHFSLSESLKKIELINP---KNAILTHMHVDLDYDMVLKST 253 H S ++L + P + +L+H+ D + + K Sbjct: 179 FLKNRIRGGKGHLSNQQALDLFKTHKPAFMSHVLLSHLSKDNNCPQLTKDL 229 >gi|21222013|ref|NP_627792.1| hypothetical protein SCO3597 [Streptomyces coelicolor A3(2)] gi|5123872|emb|CAB45464.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 270 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 89/272 (32%), Gaps = 57/272 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN------- 53 MK FT+LG + PR S + G Sbjct: 1 MKGDLRFTVLGSASPY--PRAGNPC--------------SGYLVEGGGGGGGGGGEGGGG 44 Query: 54 -TTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF------LKQKR 104 T + +D G + LRE + +D + +H HADH D L Y+ ++ Sbjct: 45 VTRLWMDAGSGT-LGALREHIRLDQLDGIWISHLHADHCA--DLLTAYYGLLYAEVELAA 101 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+ + A P L + F P V+E +D ++ G + Sbjct: 102 PVPLLAPPGIADRLAD-----FLTNGPARSPVEDAFRVVELHD---RHRARIGGLTLTSR 153 Query: 165 LQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS-- 216 HG + + G R +AY D P E+L +L + L+ +A + Sbjct: 154 AVSHG-MPAFGVRVETEDGARLAYSGDSA--PCEALTQLADDCTVLLCEADSAQAPPAGT 210 Query: 217 ---HFSLSESLKKIELINPKNAILTHMHVDLD 245 H + E+ ++TH+ L+ Sbjct: 211 EAVHHTPEEAGTTAATAGAHRLVVTHLGPFLE 242 >gi|320335819|ref|YP_004172530.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757108|gb|ADV68865.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 483 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTG----PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + T V++D G D + RE V S+DAVL TH H DH+ + + Sbjct: 22 AGTRVLIDCGLYQGDDDLEALNREPFPFDVRSLDAVLLTHAHLDHVGRL----PVLTRLG 77 Query: 104 RPIDVYAAPDCMK 116 +Y P Sbjct: 78 YRGPIYCTPATAA 90 >gi|229163378|ref|ZP_04291330.1| Beta-lactamase domain protein [Bacillus cereus R309803] gi|228620159|gb|EEK77033.1| Beta-lactamase domain protein [Bacillus cereus R309803] Length = 252 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 SNT +++D G + ID +L TH H DHI G++ Sbjct: 26 SNTNILIDAGTTLRFSLEASPYTYTDIDYILLTHFHFDHIGGLEEF 71 >gi|146318967|ref|YP_001198679.1| ribonuclease Z [Streptococcus suis 05ZYH33] gi|146321177|ref|YP_001200888.1| ribonuclease Z [Streptococcus suis 98HAH33] gi|253752036|ref|YP_003025177.1| ribonuclease Z [Streptococcus suis SC84] gi|253753861|ref|YP_003027002.1| ribonuclease Z [Streptococcus suis P1/7] gi|253755263|ref|YP_003028403.1| ribonuclease Z [Streptococcus suis BM407] gi|166991510|sp|A4W299|RNZ_STRS2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166991512|sp|A4VVZ0|RNZ_STRSY RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|145689773|gb|ABP90279.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus suis 05ZYH33] gi|145691983|gb|ABP92488.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Streptococcus suis 98HAH33] gi|251816325|emb|CAZ51954.1| ribonuclease Z [Streptococcus suis SC84] gi|251817727|emb|CAZ55478.1| ribonuclease Z [Streptococcus suis BM407] gi|251820107|emb|CAR46403.1| ribonuclease Z [Streptococcus suis P1/7] gi|292558620|gb|ADE31621.1| Beta-lactamase-like protein [Streptococcus suis GZ1] gi|319758404|gb|ADV70346.1| ribonuclease Z [Streptococcus suis JS14] Length = 309 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MQIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INQVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYF-LKQKRPIDVYAA----PDC 114 ++L + + + TH H DHI G+ G R + +++ ID+Y Sbjct: 43 QNRILETTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDIYGPVGIRSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + V +++ H I + Sbjct: 103 LASLK---------VSGTRLPYRIHFHEFDVDTVGQVLET--DKFTVFAEKLDH-TIPCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|18312205|ref|NP_558872.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] gi|18159643|gb|AAL63054.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum str. IM2] Length = 634 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 17/83 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 RS++ +S + + V++D G +F + L + +DAV+ TH H DH+ Sbjct: 187 RSAILVST-----TESNVLLDCGLKPAQNDEEFPLLDL-IDIDRLDAVVLTHAHMDHVG- 239 Query: 92 IDGLRGYFLKQKRPIDVYAAPDC 114 + K VY Sbjct: 240 ---CLPFLFKYGYKGPVYMTDPT 259 >gi|282165070|ref|YP_003357455.1| hypothetical protein MCP_2400 [Methanocella paludicola SANAE] gi|282157384|dbj|BAI62472.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 636 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 19/125 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV---------LREQVLSIDAVLYTHPHADHI 89 RSS +S T +++D G + + +IDAV+ TH H DH Sbjct: 194 RSSFLLSTP-----ETRILIDCGVSTGAEANGTPYLYVPEVSPLSNIDAVVLTHAHLDHC 248 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + K VY P + Y A + PP + ++ E Sbjct: 249 G----MIPLLYKYGYEGPVYMTPPTRDLMALLQLDYIEVANREGKRPPYESAMIRETLKH 304 Query: 149 PICMK 153 I + Sbjct: 305 TITLN 309 >gi|238916344|ref|YP_002929861.1| ribonuclease Z [Eubacterium eligens ATCC 27750] gi|259494132|sp|C4Z309|RNZ_EUBE2 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|238871704|gb|ACR71414.1| ribonuclease Z [Eubacterium eligens ATCC 27750] Length = 304 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 95/285 (33%), Gaps = 64/285 (22%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GY 98 ++ + R + +++++D G + V ++ ID + +TH HADHI G+ GL Sbjct: 19 WLTSLMTRYNGSSLMIDCGEGTQIAVKQKGWSFNPIDVICFTHYHADHISGLPGLLLTIG 78 Query: 99 FLKQKRPIDVYAAP---DCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVPI 150 +K+P+ + + L F F L ++ + I+ V Sbjct: 79 NSDRKKPLTLVGPKGLGRVVSSLRVIAPELPFELKFIELTNQQEHLSICGYEIDAFRVNH 138 Query: 151 CMKSAGGVIEA---------------IPI----LQQHGRISSL------------GFRFG 179 + G I IP QHG ++ R G Sbjct: 139 AVICYGYSISIPRIGKFDVEKAKELGIPCSMWNKLQHGTAVTIDDKEYTPDMVMGAARKG 198 Query: 180 -NVAYCTD---VNAFPAESLEKLQNLDFLIIDALKNGLHS-------SHFSLSESLKKIE 228 V YCTD V + E D I + + H + +E+ + + Sbjct: 199 LKVTYCTDSRPVQIISDNAKE----SDLFICEGMYGEDGKEAKAKEYKHMTFTEAAQLAK 254 Query: 229 LINPKNAILTHMHVDL----DY-DMVLKSTPSRVVPAFDGMQFSS 268 + + LTH L DY D K P+ + A DG Sbjct: 255 NADVREMWLTHYSPSLVRPQDYVDKARKIFPATIA-ANDGRTVEL 298 >gi|294795003|ref|ZP_06760138.1| hypothetical protein HMPREF0873_01620 [Veillonella sp. 3_1_44] gi|294454365|gb|EFG22739.1| hypothetical protein HMPREF0873_01620 [Veillonella sp. 3_1_44] Length = 240 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 32/148 (21%) Query: 46 RVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 R+ + +++D G F + R L + L TH H DH ++ L + Sbjct: 17 RIKTSTNGDELLLDAGLSFKEIQRYCRFNFLHLCGTLLTHQHGDHSKAVNDLLKLGHR-- 74 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY D L+ + + + + ++ G +P Sbjct: 75 ----VYMLKDTADALYVAGHH-------------------KAIYITPKIQFTIGNFSILP 111 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDV 187 +H + ++GF + + Y TD Sbjct: 112 FELEH-DVPNIGFLISDGEEKLLYITDT 138 >gi|196045165|ref|ZP_03112398.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196024167|gb|EDX62841.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] Length = 419 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|219669537|ref|YP_002459972.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219539797|gb|ACL21536.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 552 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 25/154 (16%) Query: 41 SLKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 S+ + + + ++ +D PD L ++ I + TH H DHI G+ L Sbjct: 26 SIIVIDGGVKFPDDELLGIDLVIPDI--TYLEKRKHKIQGIFITHGHEDHIGGLPFLLP- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 K VY M + K + YP + VI+ + Sbjct: 83 ----KLEAPVYGTKLTMGLVRA------KLRERGGYPENL-LRVIDPGE-----PVKAKD 126 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + H ++G+ G V Y D Sbjct: 127 FQVEAFRVTHSIPDAVGYGILTPLGRVIYTGDFK 160 >gi|57504574|ref|ZP_00370686.1| conserved hypothetical protein subfamily [Campylobacter coli RM2228] gi|57019469|gb|EAL56163.1| conserved hypothetical protein subfamily [Campylobacter coli RM2228] Length = 676 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 184 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 238 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 239 FRPVEKRKVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 298 >gi|158339422|ref|YP_001520599.1| hypothetical protein AM1_6350 [Acaryochloris marina MBIC11017] gi|158309663|gb|ABW31280.1| hypothetical protein AM1_6350 [Acaryochloris marina MBIC11017] Length = 408 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 75/309 (24%), Gaps = 93/309 (30%) Query: 34 KNRRTRSSLKISRV------SERGSNTTVIVDTGPDFY-------------MQV------ 68 +NR RS +I E +++D G F Q Sbjct: 77 RNRLERSQARIYGGWTTCIRIETADQYDIVLDCGTGFRLCAKDIMHKWGTEEQAQSSLPS 136 Query: 69 -LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL--------- 118 + +H H DH G D + I VYA ++ L Sbjct: 137 KHPSGTGRHLYIFGSHSHFDHTEGFD-QAAVCFDPRNHIHVYANRQYLQALDQILGIFSH 195 Query: 119 --------------FESFRYCFKALDDRTY---PPIVNPIVIENNDVPICMKSAGGVIEA 161 +E F + + R + PP P + + G Sbjct: 196 QVDYRLKGVQTPLSYELMPAQFHSCEIRDFQTDPPPDTPDKFVDQYQDLGHPIHLGETIL 255 Query: 162 IPILQQHGRISSLGFRFGN----VAYCTD-------VNAFP------AESLEKLQ---NL 201 P H L +R +CTD + P Q + Sbjct: 256 QPFEVFHPS-PCLAYRIERGGKVFIFCTDHELRRGKESDHPLQIASLEAEERLCQHSMDA 314 Query: 202 DFLIIDA--LKNG---------LHS------SHFSLSESLKKIELINPKNAILTHMHVDL 244 D L D L+ H H + + L K + H D Sbjct: 315 DILYRDGQFLRIEYDGDLGVGSPHGVSRLDWGHSCIEDVLDMATRCRIKQTYIGH--HDP 372 Query: 245 DYDMVLKST 253 + D ++ Sbjct: 373 NRDWSERNW 381 >gi|15805301|ref|NP_293993.1| ribonuclease Z [Deinococcus radiodurans R1] gi|41017585|sp|Q9RXP0|RNZ_DEIRA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|6457940|gb|AAF09851.1|AE001888_4 ElaC family protein [Deinococcus radiodurans R1] Length = 331 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 5/139 (3%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 TR + T +++D G + +V + D +L++H H DHI G D Sbjct: 11 TRDNALWVTADSGKGQTRLLLDCGGHTLDTLPLHEVQATDHLLFSHLHMDHIAGFDDFFR 70 Query: 98 YFL-KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +Q R ++ P + L + P + I D Sbjct: 71 VNFDRQSRENHLWGPPGAARILAHR----LQGYWWNHAPQLRATWRIHEVDDAAVHTWRF 126 Query: 157 GVIEAIPILQQHGRISSLG 175 + EA I GR G Sbjct: 127 ELHEAFEIAHDEGRTPRTG 145 >gi|152976163|ref|YP_001375680.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024915|gb|ABS22685.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 583 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 42/124 (33%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 87 LIENQERVKGLFITHGHEDHIGGI-----VYVMRKLSIPVYATKLTVGLIQEK------- 134 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L++ V+ I++N + H S+G F G + Y Sbjct: 135 LNEAGMLGRVDLKTIDSNS-----EVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 189 Query: 185 TDVN 188 D Sbjct: 190 GDFK 193 >gi|315225084|ref|ZP_07866901.1| ribonuclease Z [Capnocytophaga ochracea F0287] gi|314944767|gb|EFS96799.1| ribonuclease Z [Capnocytophaga ochracea F0287] Length = 304 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG C P++ S+ + ++D G Sbjct: 1 MEVTILG----------------CHSATPRSNARPSAQLLEMRGHL-----FLIDCGEAT 39 Query: 65 YMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLF 119 + LR + I + +H H DH +G+ GL F R + +Y + + Sbjct: 40 QI-ALRNANAKFSRIKHIFISHLHGDHFYGLFGLISTFQLLGREAEMHIYGPKGIKEAV- 97 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y P E + + + I QH R+ + GF F Sbjct: 98 -----LLILKLGGAYTPFP-LYFHELSSKTSELLYEDDKVLVRTIPLQH-RVYTNGFLFQ 150 >gi|283953679|ref|ZP_06371210.1| hypothetical protein C414_000010043 [Campylobacter jejuni subsp. jejuni 414] gi|283794720|gb|EFC33458.1| hypothetical protein C414_000010043 [Campylobacter jejuni subsp. jejuni 414] Length = 609 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 117 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 171 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 172 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKVGTIIHTGDFKIDQTPIDGYPTD 231 >gi|268678705|ref|YP_003303136.1| beta-lactamase [Sulfurospirillum deleyianum DSM 6946] gi|268616736|gb|ACZ11101.1| beta-lactamase domain protein [Sulfurospirillum deleyianum DSM 6946] Length = 664 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 17/155 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S SE ++V PDF LR+ I ++ +H H DHI I Y K+ + Sbjct: 148 SFPSEDMHGVDILV---PDF--SYLRQIRKKIAGIIISHAHEDHIGAI----PYLFKEMQ 198 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAGGVIEA 161 +YA P + + F + + P+ V + + I + + A Sbjct: 199 C-PLYATPLPLGMISNKFDEHGLKGHKKYFRPVEKRKVYKIGEFEVEWIHITHSIIDASA 257 Query: 162 IPILQQHGRISSLG-FRFGNV---AYCTDVNAFPA 192 + I + G I G F+ + Y TD+N F Sbjct: 258 LAITTEAGTIMHTGDFKIDHTPIDGYVTDLNRFSD 292 >gi|225017607|ref|ZP_03706799.1| hypothetical protein CLOSTMETH_01535 [Clostridium methylpentosum DSM 5476] gi|224949572|gb|EEG30781.1| hypothetical protein CLOSTMETH_01535 [Clostridium methylpentosum DSM 5476] Length = 264 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 30/159 (18%) Query: 51 GSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD G + + + A+ TH H+DHI G+ + ++ Sbjct: 21 DGKQGILVDAGIGIRNYTNSLALAGIDPRGVQAIFVTHEHSDHISGLRKIS-----ERFS 75 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VY + + + + + ++ E N + G E Sbjct: 76 LPVYGSRGTLLEILK------------KDAVGEDTVLYEINKKSAVI----GDFEVTAFH 119 Query: 166 QQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQN 200 H SLGF V+ CTD+ E + L Sbjct: 120 TPHDSAESLGFSVTDGKKKVSICTDLGHVTEEVHQHLLG 158 >gi|67517357|ref|XP_658555.1| hypothetical protein AN0951.2 [Aspergillus nidulans FGSC A4] gi|40746824|gb|EAA65980.1| hypothetical protein AN0951.2 [Aspergillus nidulans FGSC A4] gi|259488757|tpe|CBF88457.1| TPA: putative b-zip transcription factor (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1728 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 84/319 (26%), Gaps = 107/319 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS + + D G Sbjct: 1211 EIITLGTGSSA----------------PSKYRNVSSTLVHVPG----RGYYLFDCGEGTL 1250 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + ++ + +H HADH G Sbjct: 1251 GQLKRMFSPEQLREVLQNLRLIWISHLHADHHLGTVSVIKAWYQENYPSGVAQLSEPEKD 1310 Query: 92 ----IDGLRGYF--------------------LKQKRPIDVYAAPDCMKHLFESFRYCFK 127 ++ R + + P+ Y + + SF+Y Sbjct: 1311 IGKILEEKRLFVVSDLMMIEWLEEYAGVEDFGFAKLTPLSAYLYRTGDEGMKWSFKYRHC 1370 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKS------------AGGVIEAIPILQQHGR----- 170 D V I E +++ K A G+ + + H R Sbjct: 1371 RADGSYRGREVEHIKPEQSELKFNCKGSPGEELSAKLRKATGLSDILTAYVSHCRGAMAV 1430 Query: 171 --ISSLGFRF---GNVAYCTDVNAFPAESLEKLQNL---DFLIIDALKNGLHSSHFSLSE 222 I GF+ G+ +S + D ++ AL H + E Sbjct: 1431 SLIFPDGFKVSFSGDCRPSPTFVTIGQDSTVLIHEATFSDDMVGSALAKK----HSTAQE 1486 Query: 223 SLKKIELINPKNAILTHMH 241 +++ + + +LTH Sbjct: 1487 AIEVGRKMRARTILLTHFS 1505 >gi|302692492|ref|XP_003035925.1| hypothetical protein SCHCODRAFT_105520 [Schizophyllum commune H4-8] gi|300109621|gb|EFJ01023.1| hypothetical protein SCHCODRAFT_105520 [Schizophyllum commune H4-8] Length = 140 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 24/112 (21%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T LG + G P R SSL + G+ +VD Sbjct: 4 NNMAITFLGTSSGGG---------------PTEHRNCSSLLVDCC---GNGELWMVDCAE 45 Query: 63 DFYMQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 Q + + + + + TH H DH+ GI G+ P+ V + Sbjct: 46 GTTRQFMFARDVRPMQVKKIFITHMHVDHVMGI---IGFLRNVLFPLPVLGS 94 >gi|284033693|ref|YP_003383624.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283812986|gb|ADB34825.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 302 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 89/315 (28%), Gaps = 83/315 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G+ V + +N+ R + + D G Sbjct: 3 ELVVLGTGS--QV-----------ASRERNQNG--------YFLRWDSDGFLFDPGEGTQ 41 Query: 66 MQVLREQVLS--IDAVLYTHPHADHIHGIDGL---------------------RGYFLKQ 102 Q+L V + + + TH H DH G+ G+ + YF + Sbjct: 42 RQMLYAGVPATAVTRLCVTHFHGDHCLGVPGVVQRLSLDGVPHPVHAHYPASGQQYFTRL 101 Query: 103 K-------------RPIDVYAAPDC----------MKHLFESFRYCFKALDDRTYPP-IV 138 + PID ++H E+F Y D R P + Sbjct: 102 RYAASFFERAELREEPIDEEGLLSVGPFGQLWVRRLEHPVEAFGYQLIEPDGRRMLPDRL 161 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + V + V++ + + G RF A+ D Sbjct: 162 AAYGVSGPAVGRLQAAGSLVVDGRTVTVEQVSEPRRGQRF---AFVMDT-RLCEGVFRLA 217 Query: 199 QNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHV-----DLDYD 247 D L+I++ ++ H + ++ + + + +LTH L + Sbjct: 218 DGADLLVIESTYLSTEATLARRFGHLTARQAARVAQQCGVRTLVLTHFSQRYTDMRLFEE 277 Query: 248 MVLKSTPSRVVPAFD 262 VV A D Sbjct: 278 EARAEFDGDVVIAAD 292 >gi|260220932|emb|CBA28994.1| hypothetical protein Csp_A09910 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 304 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 70/230 (30%), Gaps = 50/230 (21%) Query: 51 GSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF--------L 100 +N +I+D G Q L ++ VL TH H DHI G+ F Sbjct: 43 DNNELIILDAGTGIFPLSQTLLAEMPVTANVLITHSHWDHIQGLPFFIPNFIPGNTLRLH 102 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 P+ M + + Y F ++ I ++ + + I G Sbjct: 103 GGFDPVSGKGIEQVMA-VQLQYSY-FPVREEEMKARIEYVTLMPDQPIQI------GSAT 154 Query: 161 AIPILQQHGRISSLGFRF---GNVAYCT------------------DVNAFPAE----SL 195 P L H + G+R G + T D AF E L Sbjct: 155 VTPCLLNHPVVD-FGYRIECNGKSVFFTGDHEPPYNIYELGDEGFADYQAFVDEKNKSIL 213 Query: 196 EKLQNLDFLIIDALKNG-LHSS-----HFSLSESLKKIELINPKNAILTH 239 E ++ +D I D + + H + S S+ K TH Sbjct: 214 EAIKGVDVYIADTSYTDAEYPAKKGWGHGTFSTSIASAHAAGAKVLFCTH 263 >gi|227833338|ref|YP_002835045.1| hypothetical protein cauri_1514 [Corynebacterium aurimucosum ATCC 700975] gi|262184321|ref|ZP_06043742.1| hypothetical protein CaurA7_10048 [Corynebacterium aurimucosum ATCC 700975] gi|227454354|gb|ACP33107.1| hypothetical protein cauri_1514 [Corynebacterium aurimucosum ATCC 700975] Length = 689 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 155 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIHKVKALVVTHAHEDHIGAI----PWL 203 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 204 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVNY------GPF 249 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H +LG GN+ + D+ PA S + +D + Sbjct: 250 RCRFWAVNHSVPDALGVMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLM 309 Query: 205 IID 207 + D Sbjct: 310 LCD 312 >gi|169831316|ref|YP_001717298.1| beta-lactamase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638160|gb|ACA59666.1| beta-lactamase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 282 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%) Query: 52 SNTTVIVDTGPD---FY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + DTG QVL + DAV+ +H H DH G+ + RP+ Sbjct: 39 PGHRFLYDTGQTGALVRNAQVLGVPLKEADAVVLSHGHYDHTGGLREVL---KAIGRPVP 95 Query: 108 VYAAPD 113 VYA PD Sbjct: 96 VYAHPD 101 >gi|144898422|emb|CAM75286.1| chemotaxis protein [Magnetospirillum gryphiswaldense MSR-1] Length = 872 Score = 50.1 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 53 NTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++D GP+ F + L V ID + +TH H DH G+ L ++ I +A Sbjct: 252 GRVYLIDAGPNILFTLDALGIGVNEIDGIFHTHSHDDHFSGLTTL----IRADHRIKYFA 307 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P + + P E +D+ + +E P+ H Sbjct: 308 TPLVRASVSRKMAALL------SIEPSAFADYFECHDLVEGEWNEVDGLEVRPLFSPHPV 361 Query: 171 ISSL 174 +++ Sbjct: 362 ETTM 365 >gi|319652780|ref|ZP_08006887.1| Zn-dependent hydrolase [Bacillus sp. 2_A_57_CT2] gi|317395507|gb|EFV76238.1| Zn-dependent hydrolase [Bacillus sp. 2_A_57_CT2] Length = 557 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V++D G F + L E I ++ TH H DHI G+ Sbjct: 29 DDDIVVIDAGGKFPDETLLGIDLIIPDITYLEENRDKIRGLIVTHGHEDHIGGV-----A 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L +K + VYA + + L + I I+++ + G Sbjct: 84 YLLKKINMPVYATRFTLGLIELK-------LTEHRLLGDSELITIDSDS-----RVDFGE 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F GNV + D Sbjct: 132 IGVSFFKVNHSIPDCLGIVFKTPEGNVVHTGDFK 165 >gi|218282105|ref|ZP_03488404.1| hypothetical protein EUBIFOR_00979 [Eubacterium biforme DSM 3989] gi|218216898|gb|EEC90436.1| hypothetical protein EUBIFOR_00979 [Eubacterium biforme DSM 3989] Length = 249 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 42/165 (25%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R +T +++D G + Q V + VL +H H+DH+ LK + Sbjct: 21 RHKDTQLLIDCGSTKKYLMESFQKVGACVDDTNGVLISHAHSDHVS--------QLKHFK 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +DVY+ D L + +DV K + I Sbjct: 73 HLDVYSYCDLKDAL-------------------------DKHDVFPNQKMIINDLSIQFI 107 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLI 205 H ++GF + Y TD P + + N D I Sbjct: 108 GLSHDSPHTIGFVVESETEKLVYVTDTGYVPNQIKPYIANADHYI 152 >gi|121535439|ref|ZP_01667249.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] gi|121305948|gb|EAX46880.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] Length = 302 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%) Query: 50 RGSNTTVIVDTGP-DFYMQVLR----EQVLSIDAVLYTHPHADHIHG 91 R TV++DTG Q+++ E + ID ++ THPHADH+ G Sbjct: 63 RTGGQTVLIDTGDVPAREQLVKYIKNEGITVIDKLIITHPHADHLGG 109 >gi|289168305|ref|YP_003446574.1| hydrolase [Streptococcus mitis B6] gi|288907872|emb|CBJ22712.1| hydrolase [Streptococcus mitis B6] Length = 309 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|218290113|ref|ZP_03494275.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] gi|218239822|gb|EED07011.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius LAA1] Length = 551 Score = 50.1 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 48/167 (28%), Gaps = 42/167 (25%) Query: 37 RTRSSLKISRVSERGSNTT-----------VIVDTGPDFYMQ-------------VLREQ 72 RTRS L I + G ++VD G F + L E Sbjct: 3 RTRSRLSIIPLGGVGEIGKNMTLYWYGQDMIVVDAGLKFPDEDMLGIDIVIPDITFLVEN 62 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 I + TH H DHI G+ Y L++ + VY + + R Sbjct: 63 REKIRGIFLTHGHEDHIGGL----PYVLREIN-VPVYGTRLTLGLVENKLREA------- 110 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 ++ + + G P H ++GF Sbjct: 111 ------GVHDVKLVTMDGKSRVQLGQFAVSPFYVNHSIPDTVGFAIE 151 >gi|324995925|gb|EGC27836.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK678] Length = 555 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + L + V+ + ++ L + F Sbjct: 57 LFENKERIAGVFLTHGHADAIGALPNLLA-----DAKVPVFGSELTIE-LAKLF-----V 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 ++ + VI+ N + G H SLG R G++ Y Sbjct: 106 KNNDAVKKFNDFHVIDEN-----TEIEFGKTVVSFFRTTHSIPESLGVVIKTRKGSIVYT 160 Query: 185 TDVN 188 D Sbjct: 161 GDFK 164 >gi|325971581|ref|YP_004247772.1| beta-lactamase [Spirochaeta sp. Buddy] gi|324026819|gb|ADY13578.1| beta-lactamase domain protein [Spirochaeta sp. Buddy] Length = 257 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 46/220 (20%) Query: 50 RGSNTTVIVDTGP---DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T++++D G + ++ R + ++ AV TH H DH G+ L KQ Sbjct: 19 SDGCTSILIDQGYSVVELRRRLDRFGIDLDTVKAVAVTHLHPDHAKGVGTL---CRKQG- 74 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + + + F + + P+ +I G Sbjct: 75 -VQTLISTRSIGEQKQLFEKLC--IPENQVTPVAPFEMI-----------TIGPFCLFCF 120 Query: 165 LQQHGRISSLG----FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S+G + ++ TD E ++ L ++A L+NG + Sbjct: 121 ATSHDSAGSVGWFVTYEDQSLMVLTDTGLTTEEHKMLAKDAKILFLEANYDKQMLQNGPY 180 Query: 215 S-----------SHFSLSESLKKIELIN--PKNAILTHMH 241 H S ++L ++ ++ H+ Sbjct: 181 PLYLKRRIDGSYGHLSNEQALSFLQESGFAGEHIYFIHLS 220 >gi|182677185|ref|YP_001831331.1| beta-lactamase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633068|gb|ACB93842.1| beta-lactamase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 403 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 95/282 (33%), Gaps = 64/282 (22%) Query: 43 KISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGI----- 92 + S +G ++D G + +Q+L Q IDA++ +H H DH G+ Sbjct: 121 MVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEIDALVLSHGHYDHFGGLAGFLR 180 Query: 93 ---DGLRG-----------YFLKQKRPIDVYAAPDCMKH-----------------LFES 121 D L+ + ++ V + L Sbjct: 181 QYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVAD 240 Query: 122 FRYCFKALDDRTYPPIVNPIVIE----------NNDVPICMKSAGGVIEAIPILQQHGRI 171 + + R++ +++P + + +P + G +IP +H Sbjct: 241 HGFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPG----SIPDQFRHEIA 296 Query: 172 SSLGFRFGNVAYCTDVNA-------FPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 +S + + T + A+++ ++ + II + + + + +++ Sbjct: 297 TSFHVKGRGLVILTSCSHRGVVNAVRQAQTVSGIEKV-HAIIGGFHLAPYPADY-VRQTV 354 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQF 266 ++ I P + H + Y+M P ++V A+ G Q Sbjct: 355 AALKEIGPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQL 396 >gi|153003436|ref|YP_001377761.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027009|gb|ABS24777.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 248 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 18/173 (10%) Query: 52 SNTTVIVDTGPDFYMQV----LREQ----VLSIDAVLYTHPHADHIHGIDGLRGY-FLKQ 102 + ++VD + LR V ++AV TH HADH G++GL + Sbjct: 29 GDRWLLVDCPHPIRKMMREASLRSGLELDVDRVEAVALTHLHADHASGLEGLAYFSHFAL 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSA--GGVI 159 R V A P+ + L++ + + + P+ + VP+ + A G Sbjct: 89 GRRARVAAHPEVARRLWDGHLAAGMEQVALGSGAPVSARLEDFFELVPLDERGAVRVGPF 148 Query: 160 EAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 E +H + + FR VA D AF + L D ++ +A Sbjct: 149 EIECRFTRH-PLPTTAFRIAAGGRRVACSADT-AFDPALVAWLAEADLVVHEA 199 >gi|328945267|gb|EGG39420.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1087] Length = 560 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ + I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDTKLYE-INQNTELQFKHLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|322509087|gb|ADX04541.1| Competence factor involved in DNA uptake [Acinetobacter baumannii 1656-2] gi|323519118|gb|ADX93499.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter baumannii TCDC-AB0715] Length = 804 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 559 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 609 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 610 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 665 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 666 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 719 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 720 LGHHGSKHSS---AYDFLATLKPKLAI 743 >gi|294840707|ref|ZP_06785390.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp. 6014059] Length = 810 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 565 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 615 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 616 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 671 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 672 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 725 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 726 LGHHGSKHSS---AYDFLATLKPKLAI 749 >gi|319949580|ref|ZP_08023625.1| beta-lactamase domain-containing protein [Dietzia cinnamea P4] gi|319436756|gb|EFV91831.1| beta-lactamase domain-containing protein [Dietzia cinnamea P4] Length = 283 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 51 GSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 GS T V+VD GPD R V I+ V+ TH H DH GID LR + Sbjct: 48 GSPTCVVVDPGPDDRAHAERIAAIVGEIELVVVTHRHGDHTDGIDHLRAFT 98 >gi|307611855|emb|CBX01570.1| hypothetical protein LPW_32571 [Legionella pneumophila 130b] Length = 255 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 34/249 (13%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G+S + P+N +S++ + N T+++D G D Sbjct: 2 TLKITFLGSGSSFAI-------------GPENY--QSNVLLEL-----ENDTLLIDAGTD 41 Query: 64 FYMQVLREQVLSID--AVLYTHPHADHIHGI--DGLRGYFLKQKRPIDVY-AAPDCMKHL 118 + + + D V +H H DH G+ L YF A+ + L Sbjct: 42 IKYSLRDQGLTYKDIKNVYISHLHYDHCGGLEWFALITYFDPNHSHKPCLIASDKIINEL 101 Query: 119 FE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 ++ S + + ++ + + +++ + ++ + S G Sbjct: 102 WDKSLSGGLSTLPHERANLSAFFDVKPVKQYEGFVWQSIKFKLVQTVHYYSEYELMPSFG 161 Query: 176 FRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELI 230 F + + +D + P + + + D + D H SE ++ + Sbjct: 162 LIFNYNKSRILFTSDTQSCPVQLISFYEESDIIFHDCETTESKSGVHAHYSELVQLPPHL 221 Query: 231 NPKNAILTH 239 K L H Sbjct: 222 K-KKMWLYH 229 >gi|183221676|ref|YP_001839672.1| putative cAMP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911750|ref|YP_001963305.1| CAP family transcription factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776426|gb|ABZ94727.1| CAP family transcription factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780098|gb|ABZ98396.1| Putative cAMP-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 717 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE---QVLS 75 P I P++ + +S I ++ +G ++VD P + LRE Sbjct: 204 PLIGITCL--GPSHGFDPSDNTSGFIIWLNGQG----IMVD-PPVNSTEWLRESNVNPKF 256 Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 I++++ TH HADH G + ++ I +YA M+ + +YC +L Sbjct: 257 INSIILTHCHADHDAGTFQK----ILEESKITIYATATVMESFLK--KYC--SLTKIPRK 308 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP 191 I + + GG + I S+GF F + Y +D P Sbjct: 309 EITDLFDFIPVVIGRPTIINGGEFYFHYAIH---SIPSVGFEFFFQDQSFYYTSDHLNDP 365 Query: 192 AE 193 Sbjct: 366 EA 367 >gi|152967377|ref|YP_001363161.1| DNA internalization-related competence protein ComEC/Rec2 [Kineococcus radiotolerans SRS30216] gi|151361894|gb|ABS04897.1| DNA internalization-related competence protein ComEC/Rec2 [Kineococcus radiotolerans SRS30216] Length = 800 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 50 RGSNTTVIVDTGPD--FYMQVL-REQVLSIDAVLYTHPHADHIHGI 92 G V+VD GPD L R + +DAV+ TH HADH+ G+ Sbjct: 549 SGPTAGVLVDAGPDDVLVDGCLDRLGLDRLDAVVLTHFHADHVGGL 594 >gi|229075128|ref|ZP_04208122.1| Zn-dependent hydrolase [Bacillus cereus Rock4-18] gi|228707905|gb|EEL60084.1| Zn-dependent hydrolase [Bacillus cereus Rock4-18] Length = 557 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 52/145 (35%), Gaps = 23/145 (15%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN VI+D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 SNDIVIIDCGSKFPDESLLGIDLIIPDITYLQENKDKIRGLIVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLKQ + +YA + + + K D I + +IE + + Sbjct: 85 FLKQLN-VPIYATKLTLGLIGIKLK-EHKLQDSTQLTIIDSESLIEFGQINLSFFKTNHS 142 Query: 159 IE---AIPILQQHGRISSLG-FRFG 179 I I G + G F+F Sbjct: 143 IPDCLGIAFHTPEGTVVHTGDFKFD 167 >gi|52784582|ref|YP_090411.1| YflN [Bacillus licheniformis ATCC 14580] gi|52347084|gb|AAU39718.1| YflN [Bacillus licheniformis ATCC 14580] Length = 265 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 44 ISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + + + S V++D G R + ++ TH H DH+ ++ L Sbjct: 34 VYFIFDPDSREAVLIDAGMPKSAPFILREAKERFGDFRLKGIVLTHGHFDHVGALESLL- 92 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + P+ VYA M +L Y ++ Sbjct: 93 ----ETWPVPVYAHEKEMPYLMGKADYPPAKPQVKSG 125 >gi|163119289|ref|YP_078008.2| beta-lactamase-like protein YflN [Bacillus licheniformis ATCC 14580] gi|145902795|gb|AAU22370.2| Beta-lactamase-like protein YflN [Bacillus licheniformis ATCC 14580] Length = 264 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 44 ISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + + + S V++D G R + ++ TH H DH+ ++ L Sbjct: 33 VYFIFDPDSREAVLIDAGMPKSAPFILREAKERFGDFRLKGIVLTHGHFDHVGALESLL- 91 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + P+ VYA M +L Y ++ Sbjct: 92 ----ETWPVPVYAHEKEMPYLMGKADYPPAKPQVKSG 124 >gi|146296048|ref|YP_001179819.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409624|gb|ABP66628.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 821 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 67/219 (30%) Query: 45 SRVSERGSNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLR-- 96 S V + +++D+G Q+LRE + D L +H H DHI + + Sbjct: 15 SCVLIKAGGKNILLDSGIRMKEDKLPNLQLLRE-LGGADVCLISHAHLDHIGSLPLIARE 73 Query: 97 ---GYFLKQK---------------------RPIDVYAAPDCMKHLFES----FRYCFKA 128 +F + I +YA + L + F Y F+ Sbjct: 74 YPHIFFYTNQPTKDLIKVLLYDSLKIMDAKEDEIPIYAEKNVEDLLDRTITYGFNYTFEP 133 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 L+ ++ + + I + G+V Y D + Sbjct: 134 LEGIKVTFFPAGHILGASMIFIQTQE------------------------GSVLYTGDFS 169 Query: 189 -----AFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSE 222 S+ K++ D +I ++ ++ + E Sbjct: 170 TDKQLTVDKASIPKIR-PDVVICESTYGDRLHTNRNYEE 207 >gi|239501009|ref|ZP_04660319.1| DNA internalization-related competence protein ComEC/Rec2 [Acinetobacter baumannii AB900] Length = 810 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 565 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 615 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 616 --SGAFPIIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 671 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 672 AFVASNQNQYSCVVYLQFKKVD--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 725 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 726 LGHHGSKHSS---AYDFLATLKPKLAI 749 >gi|222056877|ref|YP_002539239.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221566166|gb|ACM22138.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 558 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 46/141 (32%), Gaps = 30/141 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + VIVD G F L E++ + +L TH H DHI + + Sbjct: 32 GDDIVIVDCGLMFPEPDMLGIDIVIPDITYLIERLDKVRGILLTHGHEDHIGAL----PF 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L+Q P +Y + + E L + V+ V+ DV GV Sbjct: 88 VLRQLNP-PIYGTALTLGFVREK-------LKEYELDNKVDLRVVRPRDV-----VDLGV 134 Query: 159 IEAIPILQQHGRISSLGFRFG 179 I H + G G Sbjct: 135 FSVEFIRVAHSIVDGCGLAIG 155 >gi|23014517|ref|ZP_00054329.1| COG2703: Hemerythrin [Magnetospirillum magnetotacticum MS-1] Length = 870 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 26/159 (16%) Query: 53 NTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++D GP+ + L + ++ + +TH H DH G+ L ++ R I +A Sbjct: 252 GRIFLIDAGPNLIYSLTSLGIGINEVEGIFHTHSHDDHFAGLTTL----IRADRRIKYFA 307 Query: 111 APDCMKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 P + + + D Y E +D+ + + G +E PI H Sbjct: 308 TPMVRAAVTKKLAALLSIEEEDFSDY--------FEVHDLVLGQWNDVGGLEVRPIFSPH 359 Query: 169 GRISSLGFRFGNVA---YCTDVNAFPAESLEKLQNLDFL 204 + + F F +A Y T + L + LD L Sbjct: 360 -PVETTPFYFRVLAEGGYRTYAH------LADIAGLDIL 391 >gi|330465836|ref|YP_004403579.1| ribonuclease Z [Verrucosispora maris AB-18-032] gi|328808807|gb|AEB42979.1| ribonuclease Z [Verrucosispora maris AB-18-032] Length = 307 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 70/245 (28%), Gaps = 57/245 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL------------ 95 R + ++ D G Q+L V + D + TH H DH G+ G Sbjct: 26 RWDDEVILFDPGEGSQRQLLHTTVTATDLTRICITHFHGDHCLGLPGTIQRLSLDRVSRP 85 Query: 96 ----------RGYFLKQKRP----------IDVYAA------------PDCMKHLFESFR 123 + + + A ++H +++ Sbjct: 86 VAVHFPAEGAEYFARLRHASSFYETAELAVTPIEADGQRIALRCGTLEARRLRHPIDTYG 145 Query: 124 YCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D R P + IE V + ++ + + + G RF A Sbjct: 146 YRLVEPDGCRMLPERLAAYGIEGPAVGELQRVGHLDLDGHRVTRDEVSVPRPGQRF---A 202 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 + D + D L+I++ ++ H + ++ + + + Sbjct: 203 FVMDT-GLCDGVYALAEQADLLVIESTFLESEAALAAEVGHLTAGQAARVAAESGVRRLV 261 Query: 237 LTHMH 241 LTH Sbjct: 262 LTHFS 266 >gi|195392300|ref|XP_002054797.1| GJ24636 [Drosophila virilis] gi|194152883|gb|EDW68317.1| GJ24636 [Drosophila virilis] Length = 693 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 36/185 (19%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++D G P+F ++ R QV ++DAVL +HP A H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDPNFIKELKR-QVHTLDAVLLSHPDAYHLGALPYLVG---KLGLN 81 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC------------MK 153 +YA K + + F Y Y + +++ D +K Sbjct: 82 CPIYATIPVFK-MGQMFMYDLYMSHFNMY--DFDLFSLDDVDTAFEKITQLKYNQTVSLK 138 Query: 154 SAGGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDF 203 G I P+ H G I + + G ++ Y D N L++LQ Sbjct: 139 GKGYGISITPLSAGHMIGGTIWKI-VKVGEEDIIYAIDFNHKKERHLSGCELDRLQRPSL 197 Query: 204 LIIDA 208 LI DA Sbjct: 198 LITDA 202 >gi|84516716|ref|ZP_01004074.1| metallo-beta-lactamase family protein [Loktanella vestfoldensis SKA53] gi|84509184|gb|EAQ05643.1| metallo-beta-lactamase family protein [Loktanella vestfoldensis SKA53] Length = 559 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 45/165 (27%), Gaps = 35/165 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L + ID + TH H D Sbjct: 25 AYVYGYGPAGKERLIVVDLGITFPDMDSTPGVDIILPDISWLTARRHQIDGIFITHAHED 84 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + Q+ VYA P + L++ P V +V Sbjct: 85 HVGAVGHC-----WQQLGAPVYARPFTANIAR-------RKLEEHGQSPNVVKVV----- 127 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 P G + + H S G G + + D Sbjct: 128 DPYPHVITCGPFKVSYLPISHSIPESAGLLIDTPDGRLVHTGDFK 172 >gi|298682255|gb|ADI95318.1| beta-lactamase domain-containing protein [Pseudomonas putida] Length = 251 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 40/121 (33%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S ++R +T V+VD G Sbjct: 1 MQLTFLGGTGTVTG----------------------SKFLLTR-----DSTRVLVDCGLF 33 Query: 62 ---PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + Q L + ++DAV+ TH H DH +++ +YA P Sbjct: 34 QGFKQLRLRNWQPLPPALRALDAVVLTHAHLDHSG----YLPVLVREGYRGPIYATPATC 89 Query: 116 K 116 Sbjct: 90 A 90 >gi|298291831|ref|YP_003693770.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] gi|296928342|gb|ADH89151.1| RNA-metabolising metallo-beta-lactamase [Starkeya novella DSM 506] Length = 562 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 67/227 (29%), Gaps = 40/227 (17%) Query: 32 NPKNRR--TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHI 89 P+NRR L IS +I+ PD + ++ ++ TH H DH+ Sbjct: 29 GPRNRRKWLAVDLGISFAPPEVPGIDIIM---PDVSFLAHEAEHGNLAGLIITHGHEDHV 85 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 G+ L + VY P P + V VP Sbjct: 86 GGLVDLWP---RLGC--PVYTTPFTAALAEAR-------RLGEPGAPKIPFHV-----VP 128 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFP---------AESLE 196 ++ G E + H S G V + D P Sbjct: 129 SGGRAKIGPFEVEFVPVAHSIPDSHALAIRTPLGLVVHTGDWKIDPTPVVGNVTDPARFT 188 Query: 197 KL--QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 L + + ++ D A + G+ S + + L ++ P +T Sbjct: 189 ALGDEGVRAVVCDSTNAFREGISPSETDVQQVLAELIAAAPYRVAVT 235 >gi|296158204|ref|ZP_06841036.1| hydroxyacylglutathione hydrolase [Burkholderia sp. Ch1-1] gi|295891540|gb|EFG71326.1| hydroxyacylglutathione hydrolase [Burkholderia sp. Ch1-1] Length = 263 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 10/97 (10%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++ V+VD G +Q L ++ + A+L TH H DH+ G+ L + + V Sbjct: 21 SDGHSAVVVDPGEAAPVQAYLAKRGWRLSAILLTHHHQDHVGGVADLL-----NGQAVPV 75 Query: 109 YAAP-DCMKHLFESFRYCFKALDDRTYPPIVNPIVIE 144 Y + ++HL + P + V++ Sbjct: 76 YGPAGEAIEHLTHRLK---NGDHVSIVAPALELSVLD 109 >gi|228904796|ref|ZP_04068850.1| Metal-dependent hydrolase [Bacillus thuringiensis IBL 4222] gi|228854810|gb|EEM99414.1| Metal-dependent hydrolase [Bacillus thuringiensis IBL 4222] Length = 243 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 41/225 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLK----- 101 + ++D G + +++ ++ +D VL TH H DH+ + L Y Sbjct: 25 DDHLFLIDCGSSTFGRLIESKL--LDEVKQVTVLLTHLHPDHVGSLGDLIFYGYYSMGKL 82 Query: 102 QKRPIDVYAAPDC--MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + I VYA D +HL ++ TY + + + + Sbjct: 83 MEPSITVYAPYDLKIAEHLKTM------GVERNTYELVQFWGSVGCHHDDFI-------L 129 Query: 160 EAIPILQQH-GRISSLGFRF--------GNVAYCTDVNAFPAESLEKLQ--NLDFLIID- 207 PI H + G+ + Y D N P L L+ LD+ D Sbjct: 130 NFKPICVNHVDELPCFGYIIKICIDGRNNTIYYSGDSNDIPMSILHMLEYGELDYFYQDT 189 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + + + H SL + L + ++ + MH+D +D Sbjct: 190 CIADYEKNVHLSLRK-LDESIKQEARHKVFC-MHLDEKFDEQKAK 232 >gi|224534454|ref|ZP_03675030.1| ribonuclease Z [Borrelia spielmanii A14S] gi|224514131|gb|EEF84449.1| ribonuclease Z [Borrelia spielmanii A14S] Length = 319 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGI 92 M + ++++ I + TH HADHI G+ Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGL 71 Score = 39.0 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 16/104 (15%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPK 233 VAY TD F E +++++N + +II++ LK H + + + Sbjct: 209 KVAYITDTGYF-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTAGGAANIAKQAKVL 267 Query: 234 NAILTHMH------VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 L H DL+ P + DGM+ + Sbjct: 268 QTGLIHFSERYTLRKDLENLLKEAKLEYPDGEIFLTKDGMRLEA 311 >gi|224531528|ref|ZP_03672160.1| ribonuclease Z [Borrelia valaisiana VS116] gi|224510993|gb|EEF81399.1| ribonuclease Z [Borrelia valaisiana VS116] Length = 319 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGI 92 M + ++++ I + TH HADHI G+ Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGL 71 Score = 40.9 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 16/104 (15%) Query: 180 NVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPK 233 VAY TD F E +++++N + +II++ LK H + S + ++ Sbjct: 209 KVAYITDTGYF-KELIQQIKNFNLVIIESTFKNELKKEADKKLHLTASRAANIVKQAKVL 267 Query: 234 NAILTHMH------VDLDY--DMVLKSTPSR-VVPAFDGMQFSS 268 L H DL+ P + DGM+ + Sbjct: 268 QTGLIHFSERYTLRKDLENLLKEAKLEYPDGEIFLTKDGMRLEA 311 >gi|51599005|ref|YP_073193.1| ribonuclease Z [Borrelia garinii PBi] gi|56749371|sp|Q660C0|RNZ_BORGA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|51573576|gb|AAU07601.1| conserved hypothetical protein [Borrelia garinii PBi] Length = 319 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ++ I+G G T P + R SS+ I + + D G Sbjct: 3 FNINIIGTGG----------------TRPLHNRYLSSVLIEYNGD-----NFLFDCGEGT 41 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGI 92 M + ++++ I + TH HADHI G+ Sbjct: 42 QMSLRKQKISWQKIKMICITHLHADHITGL 71 >gi|240170906|ref|ZP_04749565.1| hypothetical protein MkanA1_16462 [Mycobacterium kansasii ATCC 12478] Length = 165 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 11/108 (10%) Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLE 196 + + + G + +P + H S G RF + +AY D + +E Sbjct: 25 IFDVHHWVDGEPVTFGTVTVVPRIVAHPT-ESYGMRFTDSTGASLAYSGDT-GICDQLVE 82 Query: 197 KLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + +D + +A + H S +E+ + + +LTH+ Sbjct: 83 LARGVDVFLCEASWTHSPDRPPDLHLSGTEAGRAARRAGVRELLLTHI 130 >gi|289579410|ref|YP_003478037.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289529123|gb|ADD03475.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter italicus Ab9] Length = 829 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 28/166 (16%) Query: 52 SNTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G PDF +++E +DAV+ +H H DH + + Sbjct: 22 DGKNILLDCGIRMSSTKDNLPDFR--LIQEH-GGVDAVIVSHAHLDHTGAL----PIISR 74 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y K ++ + PI +++ + + G Sbjct: 75 MYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHVKDMLDRVLCYTPGYTFTP 134 Query: 162 IPILQQHGRISSLGFRFGNVA-----------YCTDVNAFPAESLE 196 P Q + G G + Y D + F ++E Sbjct: 135 FPDSQIKVTLYPAGHILGAASVYITSAEGSIFYSGDFSGFRQNTIE 180 >gi|89056004|ref|YP_511455.1| beta-lactamase-like [Jannaschia sp. CCS1] gi|88865553|gb|ABD56430.1| beta-lactamase-like protein [Jannaschia sp. CCS1] Length = 288 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 78/255 (30%), Gaps = 43/255 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + ++VD G ++ + + + + TH HADH + L + K P+D Sbjct: 35 NGQPIVVDCGMGVTHALIGQGMQLRDLSLIFITHLHADHYLELGPLIHTAWTSGLKEPVD 94 Query: 108 VYAAPDC----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +Y + + D I + + I D M G +E + Sbjct: 95 IYGPAALSCYWANFVEAMRADIDLRIADDGRMDIRDLVRIHPVDPGNVMTRGGLTVEVM- 153 Query: 164 ILQQHGRIS-SLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---------- 208 H ++ + F +V D PA + + + D LI +A Sbjct: 154 -RSHHPPMTDCFAYSFRTARTHVVCSGDTAPLPALA-DFARGADLLIHEAMLVEALPDLM 211 Query: 209 ---------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVV- 258 LK L H + + K LTH+ D + + + V Sbjct: 212 RKIGDTSGKLKARLLRVHSPAQDVAAIAAEAHVKALALTHLIPSNDPNFPEAAWRTAVEG 271 Query: 259 -------PAFDGMQF 266 DG++ Sbjct: 272 IYEGPLFVGHDGLRI 286 >gi|42780885|ref|NP_978132.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|42736806|gb|AAS40740.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] Length = 419 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|255082966|ref|XP_002504469.1| predicted protein [Micromonas sp. RCC299] gi|226519737|gb|ACO65727.1| predicted protein [Micromonas sp. RCC299] Length = 826 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 30/92 (32%), Gaps = 23/92 (25%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG S G P T R SS + E + D G Sbjct: 185 SGMEVTFLGT--SSGSPSFT--------------RNVSSYALRLTDEIW-----LFDCGE 223 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 Q++R + I + TH H DHI G+ Sbjct: 224 ATQHQLMRSHLKYSKITRIFITHMHGDHIFGL 255 >gi|170742526|ref|YP_001771181.1| beta-lactamase domain-containing protein [Methylobacterium sp. 4-46] gi|168196800|gb|ACA18747.1| beta-lactamase domain protein [Methylobacterium sp. 4-46] Length = 557 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 39/136 (28%), Gaps = 31/136 (22%) Query: 48 SERGSNTTVIVDTGPDFYMQVLREQVL--------------SIDAVLYTHPHADHIHGID 93 S ++VD G F + V ++ +L TH H DHI + Sbjct: 29 GPPNSRKWIMVDCGMGFASEEHMPGVDLMYPDLSFIEKQRENLLGILITHGHEDHIGALV 88 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L + + VYA + P ++ I+ ++ + Sbjct: 89 ELWP-----RLKVPVYATRFTKSLIETR-------RLSEPGAPKIDLREIQVHE-----R 131 Query: 154 SAGGVIEAIPILQQHG 169 G E I H Sbjct: 132 HRFGPFEIEYIPVAHS 147 >gi|258645905|ref|ZP_05733374.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] gi|260403275|gb|EEW96822.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] Length = 294 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 75/209 (35%), Gaps = 29/209 (13%) Query: 42 LKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + I R + ++DTG P + + V +D V+ THPH DHI G+ + Sbjct: 53 ILIER-----NGKFALIDTGDVEHRPRMAEYLRKYGVKKVDTVIITHPHGDHIGGMFSVF 107 Query: 97 GY-----FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 P + + + + + + + RT +++ VP Sbjct: 108 ANAEIRQVYDNGVPTSL-STYKTYRKILDK-----RKIPRRTLRGGEKIQLLDG--VPFT 159 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDAL 209 + A + S +G ++GN +A E L+ D + L Sbjct: 160 VVGPLEKSNARGENSRQNNESIVGLLKYGNFTMLFTGDAEAEEEASILKSGADVKSV-VL 218 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILT 238 K G H S S +E + + ++PK A+ Sbjct: 219 KAGHHGSKTSSTE--EFLRAVSPK-AVFI 244 >gi|115378598|ref|ZP_01465751.1| cAMP phosphodiesterase [Stigmatella aurantiaca DW4/3-1] gi|310823289|ref|YP_003955647.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|115364385|gb|EAU63467.1| cAMP phosphodiesterase [Stigmatella aurantiaca DW4/3-1] gi|309396361|gb|ADO73820.1| Metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 248 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 73/221 (33%), Gaps = 31/221 (14%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYTHPHAD 87 R S L + + +++D ++RE + V TH HAD Sbjct: 18 RYSSCLAVEAEGQ-----VLLIDCPHPIRK-MMREASESSGVPLDADRVAGVALTHLHAD 71 Query: 88 HIHGIDGLRGY-FLKQKRPIDVYAAPDCMK-----HLFESFRYCFKALDDRTYP-PIVNP 140 H G++GL + F K+ + + P+ + HL + + +P + Sbjct: 72 HSSGLEGLSYFSFFLLKQKLSLLCHPEVARRLWDGHLAAGMECLIEKQGEAPHPKHFEDY 131 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN--VAYCTDVNAFPAESLEKL 198 ++ IE H ++L R G + Y D + F + L Sbjct: 132 FAHTPLSTESAIRFGPFSIECR-FTYHHLPTTALRIRAGGRCLGYSADTS-FDEGLISWL 189 Query: 199 QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D L++ G+H+ + L+ + L H Sbjct: 190 AEAD-LVVHETNYGVHTPYAKLA---ALPAELRA-RMRLIH 225 >gi|330685998|gb|EGG97621.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis VCU121] Length = 207 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 8/119 (6%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + ++A++ TH H DHI +D + K + VY + L + + Sbjct: 40 LNQINKPLEAIILTHAHYDHIGALDDII-----NKYNVPVYMHKEEFDFLNDPEKNGASK 94 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P +++ E D ++ G + SL F F A D Sbjct: 95 FKQYGMPQVISQANPEALDEG---QAQIGDFTFNVLHTPGHSPGSLSFVFDEFAVVGDT 150 >gi|115375976|ref|ZP_01463224.1| cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily [Stigmatella aurantiaca DW4/3-1] gi|310820714|ref|YP_003953072.1| camp phosphodiesterases class-II [Stigmatella aurantiaca DW4/3-1] gi|115367059|gb|EAU66046.1| cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily [Stigmatella aurantiaca DW4/3-1] gi|309393786|gb|ADO71245.1| cAMP phosphodiesterases class-II [Stigmatella aurantiaca DW4/3-1] Length = 251 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 3/111 (2%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFL-KQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 EQ+ +D +L H H DH + L + ++ P+ ++A+ +C + L S + + Sbjct: 41 EQLCKVDDILIGHSHFDHTKDLPLLADLVIGRRDSPVTIHASRECARALRTSM-FNNELW 99 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 D T P V+ G + H + S GF Sbjct: 100 PDFTRIPTRKAPVLRIKSFRAGSTFQIGPYTVQSVPVSH-PVESCGFIISR 149 >gi|75758998|ref|ZP_00739107.1| putative Zn-dependent hydrolases (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493533|gb|EAO56640.1| putative Zn-dependent hydrolases (beta-lactamase superfamily) [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 436 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 37 KNKETKILFDCGINRSYEKSYPEIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 95 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 96 ---IWTTRYTKEQL 106 >gi|322391384|ref|ZP_08064854.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321145810|gb|EFX41201.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 553 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 20/127 (15%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 M+ L E I V TH HAD I + +L + + V+ + ++ Sbjct: 52 MEYLFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----L 101 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 F +D + VI+ N GG + H SLG G++ Sbjct: 102 FVKGNDS-VKKFDDFHVIDEN----TEIDFGGTV-VSFFRTTHSIPESLGVVLKTSEGDI 155 Query: 182 AYCTDVN 188 Y D Sbjct: 156 VYTGDFK 162 >gi|289550684|ref|YP_003471588.1| Hydroxyacylglutathione hydrolase [Staphylococcus lugdunensis HKU09-01] gi|315658179|ref|ZP_07911051.1| metallo-beta-lactamase [Staphylococcus lugdunensis M23590] gi|289180216|gb|ADC87461.1| Hydroxyacylglutathione hydrolase [Staphylococcus lugdunensis HKU09-01] gi|315496508|gb|EFU84831.1| metallo-beta-lactamase [Staphylococcus lugdunensis M23590] Length = 207 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 16/123 (13%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + AVL TH H DHI +D + K P+ +Y + F + Sbjct: 40 LNQINKPLQAVLLTHAHFDHIGALDEVLA-----KYPVPLYMNDE-------EFSFLTTP 87 Query: 129 LDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG---FRFGNVAYC 184 + + ++ + P ++ I+ H S G + F + A Sbjct: 88 EKNGSEKFQQYGMPIVVSTAKPKPLQEGHANIQGFEFDVLHTPGHSPGSLSYVFNDFAIV 147 Query: 185 TDV 187 D Sbjct: 148 GDT 150 >gi|282890751|ref|ZP_06299271.1| hypothetical protein pah_c026o082 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499344|gb|EFB41643.1| hypothetical protein pah_c026o082 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 252 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 53/226 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ V + S+L + + ++ +++D G D Sbjct: 1 MKLLFLGTGSAFTV---------------GDGNYHSNLLL----QSDTHKNLLIDCGSDA 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 + + + I V +H HADH+ G+ + K ++ +A P Sbjct: 42 RFSLHEQNLDYQDIHDVYISHLHADHVGGL---EWLAFQTKFNLEAHAKPTL-------- 90 Query: 123 RYCFKALDDRTYPPIVN--PIVIENNDVPI-----------CMKSAGGVIEAIP---ILQ 166 Y AL + +++ +EN + + + IP +L Sbjct: 91 -YINNALAGPLWEHVLSGGLHSLENEEASLESFFHVKIISQTFEWEKIHFTLIPTTHVLS 149 Query: 167 QHGRISSLG----FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H G F+ ++ TD P L + D + D Sbjct: 150 NHIPQPCFGLYITFKEKSIFITTDTQFDPQHLLPYFEKADLIFHDC 195 >gi|169825865|ref|YP_001696023.1| Zn-dependent hydrolase [Lysinibacillus sphaericus C3-41] gi|168990353|gb|ACA37893.1| Zn-dependent hydrolase [Lysinibacillus sphaericus C3-41] Length = 556 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ +++D G F + L E + A++ TH H DHI GI Sbjct: 29 ADDMILIDCGAKFPDETLLGIDLIIPDITYLLENKEKVKALIVTHGHEDHIGGIP----- 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L +K + VYA + + L + + I I + G Sbjct: 84 YLLKKLNVPVYATRFTLGLIELK-------LKEHKLLRETDLIEIHADSA-----LHLGE 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG GNV + D Sbjct: 132 IDVSFFRTNHSIPDCLGIVLATPEGNVVHTGDFK 165 >gi|126736042|ref|ZP_01751786.1| metallo-beta-lactamase family protein [Roseobacter sp. CCS2] gi|126714599|gb|EBA11466.1| metallo-beta-lactamase family protein [Roseobacter sp. CCS2] Length = 554 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 37/209 (17%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + E G ++VD G F LR + I+ + TH H D Sbjct: 20 AYVYGYGEPGKERLIVVDLGVTFPDMDGTPGVDLILPDIAWLRARKAQIEGIFITHAHED 79 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA----LDDRTYPPIVN--PI 141 H+ I ++ VYA P YP ++ P+ Sbjct: 80 HVGAIGH-----YWEQLGAPVYARPFTANIARRKLDEHGHPESVVKVVGVYPEMIKCGPL 134 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQ- 199 + + + + G++ P GR+ G F+ D E++ Sbjct: 135 TVSYLPISHSIPESAGLLIDTP----EGRVLHSGDFKIDETPVVGDPWN--EALWEEVSK 188 Query: 200 -NLDFLIIDALK---NGLHSSHFSLSESL 224 + LI D+ S ++ +++ Sbjct: 189 DGVKALICDSTNVFSREPGRSEATIGDAI 217 >gi|30250218|ref|NP_842288.1| cAMP phosphodiesterase [Nitrosomonas europaea ATCC 19718] gi|30181013|emb|CAD86203.1| cAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily [Nitrosomonas europaea ATCC 19718] Length = 254 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 18/166 (10%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-----QKRPID 107 + +++D G L +L ID V TH H DHI + + + RP+ Sbjct: 24 DEDILIDAGTGVGTLALD-DLLKIDHVFVTHSHLDHIA----FIPFLVDTTGSLRDRPLI 78 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A P ++ L + D P V P + + G P+ Sbjct: 79 VHALPATLECLQKHIFNWHVWPDFSRIPDAVRPY-MRYQPFAVGETIVLGSRRITPLPAC 137 Query: 168 HGRISSLGFRFG----NVAYCTDVNAFPA--ESLEKLQNLDFLIID 207 H + ++GF+ ++ + D A E++ ++ NL +LII+ Sbjct: 138 HA-VPAVGFQLDSGQASLVFTGDTTANDGLWEAINRITNLRYLIIE 182 >gi|309806465|ref|ZP_07700470.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167138|gb|EFO69312.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 03V1-b] Length = 272 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 25 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 81 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 134 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 135 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 191 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 192 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQSLVKKS 240 >gi|227502997|ref|ZP_03933046.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] gi|227076058|gb|EEI14021.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] Length = 253 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 91/282 (32%), Gaps = 49/282 (17%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILGC S VP NP +S + + ++I+D G Sbjct: 1 MKLTILGC--SGSVP---------TADNP------ASGYVVSF---DNAPSIILDMGSGT 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 Q+ + Q V ++H HADH L + ++ P + H Sbjct: 41 LGQLAQLQDPCDAHVAFSHLHADHCADFPSLMVW--RRFHPTAPAASRNFCFGPSATPTH 98 Query: 118 LFESFRYCFKALDDRT----YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L +DD + + P V +DV I +EA + +H + Sbjct: 99 LGRLSSDEVNGMDDMSDTLAFSPWVAGERQLVDDVFITPFPVNHPVEAYALRIEHAKTGK 158 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSHFSLSESLKKIE 228 + Y D + PA ++ + D + +A H S +E+ + Sbjct: 159 T------ITYSGDTSYTPAL-VDAARGADLFLCEATWGASSEGMAPGMHMSGAEAGRAAR 211 Query: 229 LINPKNAILTHMHVDLDYD----MVLKSTPSRVVPAFDGMQF 266 + +L H+ D + + +V GMQF Sbjct: 212 EAGVRTLVLIHIQPWGDAEATVAAAREEFDGEIVLGTAGMQF 253 >gi|115352044|ref|YP_773883.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115282032|gb|ABI87549.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 279 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 10/69 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ----------VLREQVLSIDAVLYTHPHADH 88 SS+ I+ RG T+++D G + Q + Q ID +L TH H DH Sbjct: 51 PSSIHINCYLVRGRGRTILIDAGAGGFKQWGGKLMANLALAGVQPSDIDTILLTHAHPDH 110 Query: 89 IHGIDGLRG 97 + G+ G Sbjct: 111 VGGLLDSSG 119 >gi|319649504|ref|ZP_08003660.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] gi|317398666|gb|EFV79348.1| metallo-beta-lactamase [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++D G F L + + + TH H DHI G+ Sbjct: 30 DEDIYVIDAGLMFPENEMLGIDIVIPDITYLVQNKERVKGIFLTHGHEDHIGGLS----- 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ K + VY + + ++ Y I I N+D + SA Sbjct: 85 YVLTKVNVPVYGTKLTLALAKAKMK-------EQEYRGKAKFIEI-NSDTKVEFDSA--- 133 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + H S+G G + Y D Sbjct: 134 -DVTFFRTGHSIPDSVGVAIHTSEGAIVYTGDFK 166 >gi|269986720|gb|EEZ93000.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 236 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 31/213 (14%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGY--FL 100 R + ++ D GP +L + I+ V TH H DH G+ L Y Sbjct: 17 ERNISFALDDKIVFDFGPHTVESLLDFNIDPRKIEIVAITHMHLDHFSGLPELFWYRAIH 76 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + V + + + + + VN +E+ Sbjct: 77 NAQNKLIVLGPEGIKNNTEKLLKTLQTPKEFK-----VNAEFVEDKKYDF---------- 121 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL------K 210 +P +H I G+R + Y D A+ ++ + D L+ + K Sbjct: 122 IMPFRARHLVID-NGYRVDYKGKTIFYSGDT-AYSQNVVKGAEEADILLHEMTYTDEKKK 179 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 H + S ++ E + K + H+ ++ Sbjct: 180 EADFWKHSTYSSTMNVFEESHAKRLVPVHLSIE 212 >gi|197120523|ref|YP_002132474.1| beta-lactamase [Anaeromyxobacter sp. K] gi|196170372|gb|ACG71345.1| beta-lactamase domain protein [Anaeromyxobacter sp. K] Length = 546 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ + AV TH H DH+ + FL ++ P+ VY + L Sbjct: 51 LRERREQVGAVFLTHGHEDHLGALP-----FLLREVPVPVYGTRFTLALLRPRLDEAGVR 105 Query: 129 LDDRTYPP 136 D R P Sbjct: 106 ADLREVRP 113 >gi|16800312|ref|NP_470580.1| hypothetical protein lin1243 [Listeria innocua Clip11262] gi|16800822|ref|NP_471090.1| hypothetical protein lin1754 [Listeria innocua Clip11262] gi|16413717|emb|CAC96474.1| lin1243 [Listeria innocua Clip11262] gi|16414241|emb|CAC96985.1| lin1754 [Listeria innocua Clip11262] Length = 252 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 48/201 (23%) Query: 50 RGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++++ G +F L + +++A L +H H DH+ G+ + + I Sbjct: 39 SSGRSQLLIECGVNFDKIRK-ALNFDLSAVEACLISHEHGDHVAGVKKML-----RTSSI 92 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA+ + L P +++ D G +P Sbjct: 93 KIYASEGTLSALN---------------VPDSRQFILKEKDAQ-----NIGEWIILPFQT 132 Query: 167 QHGRISSLGFRF----GNVAYCTD-------VNAFPAESLEKLQNLDFLIIDALKNGLH- 214 +H LGF + + TD +E + D L + + +H Sbjct: 133 EHDAKEPLGFMIQRHNERLLFITDSYFVRYKFKNINYLMIECNYSADILEENVINKVIHQ 192 Query: 215 -------SSHFSLSESLKKIE 228 SHFSL + + Sbjct: 193 VQKKRVLQSHFSLENVKEFLN 213 >gi|15807662|ref|NP_296138.1| hypothetical protein DR_2417m [Deinococcus radiodurans R1] Length = 579 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 60/194 (30%), Gaps = 36/194 (18%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + L E I + TH H DHI G+ Y + + VY P + + E Sbjct: 66 RIDYLLEHQDKIKGWILTHGHEDHIGGL----PYIFARLPRVPVYGLPLTLALVREKLS- 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGN 180 V+ + D G A H + G+ G+ Sbjct: 121 -------EFGLQDVDLREVTYGDE----VRFGQSFVAEFFCMTHSIPDNAGYILKTPVGD 169 Query: 181 VAYCTDVNAFPA--------ESLEKLQ-----NLDFLIID---ALKNGLHSSHFSLSESL 224 V + D P LE+++ + LI D A + G S ++ +L Sbjct: 170 VLHTGDFKIDPDVGTGAGIVSDLERVEQAGKDGVLLLISDSTNAERPGHTPSEAEIARNL 229 Query: 225 KKIELINPKNAILT 238 ++I LT Sbjct: 230 EEIIKGCRGRVFLT 243 >gi|220915234|ref|YP_002490538.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953088|gb|ACL63472.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 546 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ + AV TH H DH+ + FL ++ P+ VY + L Sbjct: 51 LRERREQVGAVFLTHGHEDHLGALP-----FLLREVPVPVYGTRFTLALLRPRLDEAGVR 105 Query: 129 LDDRTYPP 136 D R P Sbjct: 106 ADLREVRP 113 >gi|149002368|ref|ZP_01827310.1| ribonuclease Z [Streptococcus pneumoniae SP14-BS69] gi|147759683|gb|EDK66674.1| ribonuclease Z [Streptococcus pneumoniae SP14-BS69] Length = 242 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|70607049|ref|YP_255919.1| metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] gi|76363385|sp|Q4J9A4|RNZ_SULAC RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|68567697|gb|AAY80626.1| metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] Length = 292 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/297 (12%), Positives = 79/297 (26%), Gaps = 100/297 (33%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +G G G P N+R + I R +++D G Sbjct: 2 FEIIFIGVG--GGAP---------------NKRGLPGILIRREGFE-----ILLDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 +++ + ++ + +H H DH+ G+ G+ +++ + + +L Sbjct: 40 QNKMIEHSISFMKLNLIGISHLHGDHVLGLPGIIQTMAMYSRQQKLLLMGPTTLQDYLKS 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 S ++ + + + H I S GF Sbjct: 100 SSKHTYFKP---------------GFETEFIQSYEDQNLTITTFRTCH-TIESYGFLIKE 143 Query: 180 --------------------------------------------------NVAYCTDVNA 189 ++AY D Sbjct: 144 KDKTKVDAERLKKEGITDWRIIRKLKEGKRVEIDTKVFLPEDYLYVKKGLSIAYTGDTA- 202 Query: 190 FP-AESLEKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 P L ++ +D LI D+ + H + +++ + + K L H+ Sbjct: 203 -PCDSVLNAIKGVDLLIHDSTFLNEREAHDYGHSNCTDAAEIASKADVKRLALYHIS 258 >gi|322388535|ref|ZP_08062137.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321140653|gb|EFX36156.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 559 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + A+L TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKALLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + L++ I +N + ++A Sbjct: 90 QANIPIYAGPLALALIR-------GKLEEHGLLRNATLHEINHN-----TELTFKNLKAT 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H LG G + D Sbjct: 138 FFRTTHSIPEPLGIVIHTPQGKIVCTGDFK 167 >gi|301167127|emb|CBW26706.1| putative beta-lactamase-like protein [Bacteriovorax marinus SJ] Length = 254 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 24/139 (17%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ-KRPI 106 + +++D G QVL ID +L +H H DHI + L Q RP Sbjct: 24 DGKLLIDAGSVASGIQIPEQVL------IDNILISHSHLDHISDLAFLADNCFGQKGRPF 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYP-----PIVNPIVIENNDVPICMKSAGGVIEA 161 +++ + + L+D+ +P P + N++ + G + Sbjct: 78 EIHTVKQVKETIMT------HLLNDKIWPDFTKLPSAKNPTLHFNELEPEKEVEIGDYKV 131 Query: 162 IPILQQHGRISSLGFRFGN 180 P+ H GF Sbjct: 132 TPVPVNH-DGPGHGFIIEK 149 >gi|52550089|gb|AAU83938.1| metal-dependent hydrolases of the beta-lactamase superfamily II [uncultured archaeon GZfos35A2] Length = 217 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 11/116 (9%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N+ ++ DTG + M+ L + SIDA++ +H H DH+ GID + Sbjct: 26 EADNSKILFDTGASGDILSYNMKQLELKRESIDAIVLSHEHWDHVGGIDAVL------HP 79 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 ++VY L + + + + P + P V ++ + K V+E Sbjct: 80 EVEVYLPRSFSSELKKRIAKQVAKVIEVSGPGDITPGVHTTGELGLKTKEQSLVLE 135 >gi|209543838|ref|YP_002276067.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209531515|gb|ACI51452.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 291 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 64/191 (33%), Gaps = 42/191 (21%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQV--LSIDAVLY 81 P R + + TV++DTG +L + IDAVL Sbjct: 54 RPPQARLSVGAYVVQDG----RKTVLIDTGAGGFNGWGGRLRSALLAANIELDDIDAVLL 109 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE-SF----RYCFKALDDRTYPP 136 TH H DHI G+ V+ + + E F +Y F D+ Sbjct: 110 THAHPDHIGGL--------AAAGETPVFKNAELILSQHEYEFWTDEKYSFGIPDNARPKF 161 Query: 137 IVNPIVIENNDVPICMKSAGGV---IEAIPILQQ---HGRISSLGFRF----GNVAYCTD 186 ++ + + + +AG V IE +P+ HG G+R ++ D Sbjct: 162 MLARNALAAYRARMTLVTAGEVLPGIEFVPLPGHTPGHG-----GYRISSGGSSLLIWGD 216 Query: 187 VNAFPAESLEK 197 + FP + Sbjct: 217 IVHFPDIQIPY 227 >gi|167760808|ref|ZP_02432935.1| hypothetical protein CLOSCI_03193 [Clostridium scindens ATCC 35704] gi|167661695|gb|EDS05825.1| hypothetical protein CLOSCI_03193 [Clostridium scindens ATCC 35704] Length = 268 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 79/257 (30%), Gaps = 49/257 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G + + +S E +VD G Sbjct: 1 MKLTILGTGNAA---VSEC--------------YNTCFVLSDKEE-----YFLVDAGGGN 38 Query: 65 Y-MQVLRE---QVLSIDAVLYTHPHADHIHG------IDGLRGYFLKQKRPIDVYAAPDC 114 +++L++ ++ I + TH H DH+ G + G R K + + +Y + Sbjct: 39 RILKLLKDAGIELEDIHNIFVTHEHIDHVLGVIWLIRMIGQRMNQGKYEGDLRIYCHQEL 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + + R + + +E+ + + Sbjct: 99 AEKIQTIASLTIQKKVCRHMGERIQFVKVESGEQR-----EIMGCTVTFFDIASTKAKQF 153 Query: 175 GF--RFGNVAYCTDVNAFP--AESLEKLQNLD-------FLIIDALKNGLHSSHFS-LSE 222 GF + N T V P + E ++ L +A K + H S + E Sbjct: 154 GFTMKLKNGGKFTCVGDEPYNEANYEYVKGSSWLLHEAFCLYAEADKFKPYEKHHSTVKE 213 Query: 223 SLKKIELINPKNAILTH 239 + + E + N +L H Sbjct: 214 ACQLAEELGVPNLLLYH 230 >gi|153854800|ref|ZP_01996034.1| hypothetical protein DORLON_02032 [Dorea longicatena DSM 13814] gi|149752707|gb|EDM62638.1| hypothetical protein DORLON_02032 [Dorea longicatena DSM 13814] Length = 266 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 69/257 (26%), Gaps = 49/257 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G + V A + V+ DTG D Sbjct: 1 MKLTILGTGNAT-VSECYNTCYAISDEGKH-------FLVD-AGGGNRILKVLKDTGIDM 51 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID---------VYAAPDCM 115 I + TH H DH+ GI + ++ +Y + Sbjct: 52 ---------NDIHDIFVTHEHVDHVLGI---IWLVRMIGQRMNQGKYEGDLRIYCHEELA 99 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + + + V+++ D G + + G Sbjct: 100 EKIQAIANMTIQQKVCKHMGERIQFDVVKDGD---SRTILGCPVTF--FDIGSTKAKQFG 154 Query: 176 FRFG-----NVAYCTDVNAFPAESLEKLQNLD-------FLIIDALKNGLHSSHFS-LSE 222 F D + + ++ D L +A K + H S + E Sbjct: 155 FTMQLKSGKKFTCVGD-EPYNEVDYKYVKGSDWLLHEAFCLFGEADKFKPYEKHHSTVKE 213 Query: 223 SLKKIELINPKNAILTH 239 + + E + N +L H Sbjct: 214 ACQLAEELGVPNLLLYH 230 >gi|304395079|ref|ZP_07376963.1| beta-lactamase domain-containing protein [Pantoea sp. aB] gi|304357332|gb|EFM21695.1| beta-lactamase domain-containing protein [Pantoea sp. aB] Length = 325 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 18/130 (13%) Query: 44 ISRVSERGSNTTVIVDTGPD---------FYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 I+ ++VDTG + SIDAVL TH HADH G+ Sbjct: 84 INAFVIDDGKKRILVDTGAGELFGHDGGHLLTNLAAAGYPAESIDAVLLTHVHADHSGGV 143 Query: 93 DGL------RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 KR +D + P + S + F A +RT P++N +++ Sbjct: 144 SRAGKPAFPEAEVYVDKRDVDFWLNPANASKVEASQAHTF-ADSERTLRPVMNAGLLKTF 202 Query: 147 DVPICMKSAG 156 P + Sbjct: 203 MAPATLPGGI 212 >gi|302504357|ref|XP_003014137.1| hypothetical protein ARB_07442 [Arthroderma benhamiae CBS 112371] gi|291177705|gb|EFE33497.1| hypothetical protein ARB_07442 [Arthroderma benhamiae CBS 112371] Length = 363 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 13 GASLGVPRIT----GDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF---- 64 G + G PR D + T + L +++DTG Sbjct: 67 GNATGAPRRGREAQCLCDK-DSRGKSWQGTNTYLL------GRGAKRLLIDTGEGKPSWS 119 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 Q L + +I L TH H DH+ G+ LR + Sbjct: 120 VALQQTLTSERATISHALLTHWHHDHVGGVRDLRRICPDVQ 160 >gi|215261109|pdb|2ZDE|A Chain A, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261110|pdb|2ZDE|B Chain B, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261111|pdb|2ZDE|C Chain C, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|215261112|pdb|2ZDE|D Chain D, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311946|pdb|3IE1|A Chain A, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311947|pdb|3IE1|B Chain B, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311948|pdb|3IE1|C Chain C, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna gi|255311949|pdb|3IE1|D Chain D, Crystal Structure Of H380a Mutant Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Length = 431 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|86152382|ref|ZP_01070592.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86154125|ref|ZP_01072324.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315125094|ref|YP_004067098.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85840679|gb|EAQ57931.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85842365|gb|EAQ59581.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315018816|gb|ADT66909.1| metallo-beta-lactamase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 662 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 170 DKIRGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 224 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 225 FRPVEKRKVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 284 >gi|183448204|pdb|2YVD|A Chain A, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448205|pdb|2YVD|B Chain B, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448206|pdb|2YVD|C Chain C, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|183448207|pdb|2YVD|D Chain D, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311954|pdb|3IE2|A Chain A, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311955|pdb|3IE2|B Chain B, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311956|pdb|3IE2|C Chain C, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311957|pdb|3IE2|D Chain D, Crystal Structure Of H400v Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|149194710|ref|ZP_01871805.1| hypothetical protein CMTB2_04997 [Caminibacter mediatlanticus TB-2] gi|149135133|gb|EDM23614.1| hypothetical protein CMTB2_04997 [Caminibacter mediatlanticus TB-2] Length = 633 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 70/201 (34%), Gaps = 36/201 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKI-----SRVSERGSNTTV 56 K + FT LG G+ I G+ + N S I S +E + Sbjct: 82 KGWVRFTPLG-----GLDEIGGNCAVLETEN--------SAIIIDCGMSFPNEDMHGVDI 128 Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++ PDF LRE I ++ TH H DHI + +L ++ +Y + Sbjct: 129 LI---PDF--TYLREIRHKIKGLIITHGHEDHIGAVP-----YLFKEMQFPIYGTSLPLA 178 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISS 173 + F+ + + I+ D I M + ++ I G I Sbjct: 179 MIENKFKEHKIHQYKSYFRSVKKRHPIQIGDFKIEWIHMTHSIIDSSSLAIQTPVGTIIH 238 Query: 174 LG-FRFGNVAYCTDVNAFPAE 193 G F+ + T ++ FP + Sbjct: 239 TGDFKIDH----TPIDGFPPD 255 >gi|295135245|ref|YP_003585921.1| metallo-beta-lactamase superfamily protein [Zunongwangia profunda SM-A87] gi|294983260|gb|ADF53725.1| metallo-beta-lactamase superfamily protein [Zunongwangia profunda SM-A87] Length = 458 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G Q L+E V IDAVL TH H DH + L Sbjct: 25 DTGDRKILIDCGL---FQGLKELRLKNWEYPPVNVGDIDAVLLTHGHMDHTGYLPRL--- 78 Query: 99 FLKQKRPIDVYAAPDCMK 116 +KQ +Y + Sbjct: 79 -VKQGFNGPIYGTNPTLD 95 >gi|251798941|ref|YP_003013672.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247546567|gb|ACT03586.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 211 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 T + L + + G +I+D G + R + ++A+L TH H DH+ G++ +R Sbjct: 13 TNAYLLTEKDEQSGEERGIIIDPGMGPKRLLDRIAGVKVEAILLTHAHFDHMGGVEEIR 71 >gi|89898493|ref|YP_515603.1| ribonuclease Z [Chlamydophila felis Fe/C-56] gi|123483077|sp|Q253T0|RNZ_CHLFF RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|89331865|dbj|BAE81458.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Chlamydophila felis Fe/C-56] Length = 306 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 63/211 (29%), Gaps = 44/211 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 +LGC +S PT +N+ R +N ++ D G Sbjct: 2 SCRELIVLGC-SSQQ------------PTRTRNQ--------GAYLFRWNNEGLLFDPGE 40 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDG--LRGYFLKQKRPIDVYAAPDCMKHL 118 Q + + + + +H H DH G+ +R K PI Y K+ Sbjct: 41 GTQRQFIFANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKVTHPIHCYYPASGKKY- 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F+ RY + VIE+ + G H + +LG+R Sbjct: 100 FDRLRYGTIYHE--------TIHVIEHPIDREGIVEDFGSFRIEARRLDH-LVDTLGWRI 150 Query: 179 GNVAYCTDV-NAFPAESLEK-LQNL---DFL 204 D P + L+ D L Sbjct: 151 TE----PDTIKFIPEKIKACGLRGPIMQDLL 177 >gi|54026863|ref|YP_121105.1| ribonuclease Z [Nocardia farcinica IFM 10152] gi|76363378|sp|Q5YQ00|RNZ_NOCFA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|54018371|dbj|BAD59741.1| putative hydrolase [Nocardia farcinica IFM 10152] Length = 305 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 37/182 (20%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R V+ D Sbjct: 1 MSQR-ELVVLGT--ASQVP-----------TRQRNHNG--------YLLRWGREGVLFDP 38 Query: 61 GPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+ V + D + TH H DH G+ G+ R + P+D Y + Sbjct: 39 GEGTQRQMAFAGVAATDITRIALTHFHGDHCLGLPGIVQRINLDRVAHPVDAYYPASGQE 98 Query: 117 HLFESFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + F D PI P ++ D P +++ + H + + G Sbjct: 99 YFDRLCSASSFYRRVDLRTHPIAGPGPLDAPDAPFTIEA---------VALSH-PVEAFG 148 Query: 176 FR 177 +R Sbjct: 149 YR 150 >gi|86141953|ref|ZP_01060477.1| hypothetical protein MED217_02440 [Leeuwenhoekiella blandensis MED217] gi|85831516|gb|EAQ49972.1| hypothetical protein MED217_02440 [Leeuwenhoekiella blandensis MED217] Length = 458 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G Q L+E V IDAVL TH H DH + L Sbjct: 25 DTGDRKILIDCGL---FQGLKELRLKNWEYPPVNVGDIDAVLLTHGHMDHTGYLPRL--- 78 Query: 99 FLKQKRPIDVYAAPDCMK 116 +KQ +Y + Sbjct: 79 -VKQGFNGPIYGTNPTLD 95 >gi|293605355|ref|ZP_06687739.1| metallo-beta-lactamase [Achromobacter piechaudii ATCC 43553] gi|292816247|gb|EFF75344.1| metallo-beta-lactamase [Achromobacter piechaudii ATCC 43553] Length = 279 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ----------VLREQVLSIDAVLYTHPHADH 88 SS+ I+ RG T+++D G + Q + Q ID +L TH H DH Sbjct: 51 PSSIHINCYLVRGRGRTILIDAGAGGFKQWGGKLIANLALAGVQPSDIDTILLTHAHPDH 110 Query: 89 IHGIDG 94 + G+ Sbjct: 111 VGGLLD 116 >gi|289596709|ref|YP_003483405.1| hypothetical protein Aboo_1034 [Aciduliprofundum boonei T469] gi|289534496|gb|ADD08843.1| conserved hypothetical protein [Aciduliprofundum boonei T469] Length = 519 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 64/206 (31%), Gaps = 71/206 (34%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-----------Y 124 +DAVL TH H DH I LR I + A+P+ + + Y Sbjct: 87 VDAVLLTHAHMDHYGMIGYLRF-------DIPLVASPETLAIIKAYQDAGKSDNATSVIY 139 Query: 125 CFKALDDRTYPPIV--NPIVIENNDVP--------------------------------- 149 K +D + PI+ I+NN+ Sbjct: 140 GAKREEDSSSMPILKSKGNSIKNNEEKIRKYLMLRRLIPTEELSYEEIDFLCLQSTEERM 199 Query: 150 --ICMKSAGGVIEAIPI-----LQQHGRISSLGFRFGN-----VAYCTDVN---AFPAES 194 I G +E++P H ++G+ + +AY D E+ Sbjct: 200 DYIAEMLEFGHLESLPFKVNAHPVDHSIYGAVGYIIEDGNSKKIAYTGDFRMHGERGEET 259 Query: 195 LE---KLQNLDFLIIDALKNGLHSSH 217 L+ K + D LII+ + H Sbjct: 260 LKFTNKAKGSDVLIIEGTRLEDDREH 285 >gi|258423198|ref|ZP_05686091.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9635] gi|257846648|gb|EEV70669.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9635] Length = 207 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESEKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIV-----NRFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSAEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|237732976|ref|ZP_04563457.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383966|gb|EEO34057.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 266 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 80/270 (29%), Gaps = 67/270 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 ILG G + C KN ++VD G Sbjct: 3 KVIILGTGNAG---VKNCY-NTCFALKNKN------------------EYLLVDAGGGNG 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---------DVYAAP 112 Q+ ++ I ++ TH H DH+ G + F I ++Y Sbjct: 41 ILKQLELAKIELSQITNMIVTHSHTDHVLG---VVWIFRMVATKIKSGEYDGNFNIYCHD 97 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----------- 161 + + + + + +R Y I I I + ++ Sbjct: 98 ELVSTIKTIIK---LTVQERLYNLIDERIFINEVQDGQKITICEHLVTFFDIYSTKAKQF 154 Query: 162 -IPILQQHGRISSLGFR-FGNVA--YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 I G+++ LG F + Y D +E+ Q DF H H Sbjct: 155 GFSIELDDGKLTCLGDEPFNELCYQYAVDSKWLLSEAFCLYQERDFF----KPYEKH--H 208 Query: 218 FSLSESLKKIELINPKNAILTH-----MHV 242 ++ E+ + + +N KN IL H + Sbjct: 209 STVREASELAQTLNIKNLILYHTEEKNLSH 238 >gi|207270802|ref|YP_002261444.1| gp28 [Listeria phage P40] gi|204308017|gb|ACI00388.1| gp28 [Listeria phage P40] Length = 207 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 34/146 (23%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 +++D G F ++E++ D + TH H+DHI P Sbjct: 20 IKNIMIDAGVPFIK--MKEELYECDYLFITHHHSDHI---------------------RP 56 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 +K++ + F ++ + P IEN + I P H + Sbjct: 57 STLKNIKKYFP----NIEICSNPVTAYLHDIENTVYNNQEQELKHSI-VTPFQCHH-DVE 110 Query: 173 SLGFRF-----GNVAYCTDVNAFPAE 193 GF F V Y TD N+ Sbjct: 111 CQGFVFEFDTGERVIYATDTNSMEDA 136 >gi|297545551|ref|YP_003677853.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843326|gb|ADH61842.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 829 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 28/166 (16%) Query: 52 SNTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G PDF +++E +DA++ +H H DH + + Sbjct: 22 DGKNILLDCGIRMSSTKDNLPDFR--LIQEH-GGVDAIIVSHAHLDHTGAL----PIISR 74 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y K ++ + PI +++ + + G Sbjct: 75 MYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHVKDMLDRVLCYTPGYTFTP 134 Query: 162 IPILQQHGRISSLGFRFGNVA-----------YCTDVNAFPAESLE 196 P Q + G G + Y D + F ++E Sbjct: 135 FPDSQIKVTLYPAGHILGAASVYITSAEGSIFYSGDFSGFRQNTIE 180 >gi|159900929|ref|YP_001547176.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893968|gb|ABX07048.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 569 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 63/186 (33%), Gaps = 34/186 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR++V +I +L TH H DHI + + + VY + L Sbjct: 57 LRDKVANIRGILLTHGHEDHIGAV----PWLIGDLGFPTVYGTTLTLGLLSNK------- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA----YC 184 L + V VI D K G P H S+GF + A Y Sbjct: 106 LKEHRLTDKVATKVIAPGD-----KFQLGCFTIEPFHIAHSIPDSVGFGLTSPAGLALYI 160 Query: 185 TD--VNAFP----AESLEKL-----QNLDFLIIDALKNGL---HSSHFSLSESLKKIELI 230 TD ++ P +++L +N L+ D ++ S + ++ +I Sbjct: 161 TDWKLDHTPVDNWPTEIDRLVDFGRRNPIVLVTDCVRVESKGYTPSERVVGDAFDQIFAT 220 Query: 231 NPKNAI 236 P I Sbjct: 221 APGRVI 226 >gi|90407278|ref|ZP_01215464.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] gi|90311561|gb|EAS39660.1| putative hydroxyacylglutathione hydrolase GloB [Psychromonas sp. CNPT3] Length = 258 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%) Query: 43 KISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + S ++VD G +++L +Q LS+DA+L TH H DHI GI L +F K Sbjct: 14 YIWLIKDSQSQRCILVDPGDAQPVLEILEQQNLSVDAILVTHAHQDHIGGISELLAHFNK 73 Query: 102 QKRPIDVY 109 + I +Y Sbjct: 74 E---IPIY 78 >gi|328725278|ref|XP_003248410.1| PREDICTED: hypothetical protein LOC100568541 [Acyrthosiphon pisum] Length = 431 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 51/168 (30%), Gaps = 25/168 (14%) Query: 54 TTVIVDTGP---------DFYMQVLREQVL--SIDAVLYTHPHADHIHGI--DGLRGY-- 98 +++D G + + V ID +L TH H DH+ GI DG Y Sbjct: 209 QNILIDAGTAKCFGPTLGHVRENLKKAGVQPEQIDTILITHAHPDHLCGITLDGKMAYPN 268 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 K +D + +P + F+ FK D P ++ + + Sbjct: 269 AKVYLAKEDVDFWTSPANEAKATDFFKPIFKMTRDALQPYQKAGQLVAFTKTSFNVPNVQ 328 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA-------FPAESLEK 197 +I + H G DV +P S + Sbjct: 329 LIITH-GHTEGHSSYLVDGQNGQKFLGLGDVVHYGAVQFPYPDASYKP 375 >gi|323698930|ref|ZP_08110842.1| metallo-beta-lactamase family protein [Desulfovibrio sp. ND132] gi|323458862|gb|EGB14727.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans ND132] Length = 389 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 17/129 (13%) Query: 41 SLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLS------IDAVLYTHPHADHIHG 91 S + G+ ++DTG RE + I+A+ +H H DH G Sbjct: 143 SCLLEVEDLDGTIHKYLLDTGWSYEWMENSFKREGIDKMLEEQQIEALFISHEHWDHFWG 202 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD----DRTYPPIVNPIVIENND 147 + +K I +Y K + + C + D+ PI+ + + D Sbjct: 203 L----PVTVKYDNRIPLYVHDGFYKEGLQYIKDCGYKGEMTIADKPITPIIPGMALLKFD 258 Query: 148 VPICMKSAG 156 VPI + G Sbjct: 259 VPIINRVFG 267 >gi|126642645|ref|YP_001085629.1| competence factor involved in DNA uptake [Acinetobacter baumannii ATCC 17978] Length = 787 Score = 49.7 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 542 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 592 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 593 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 648 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 649 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 702 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 703 LGHHGSKHSS---AYDFLATLKPKLAI 726 >gi|282916815|ref|ZP_06324573.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus D139] gi|283770621|ref|ZP_06343513.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus H19] gi|282319302|gb|EFB49654.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus D139] gi|283460768|gb|EFC07858.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus H19] Length = 207 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESEKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIVD-----RFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSAEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|125717186|ref|YP_001034319.1| metallo-beta-lactamase superfamily hydrolase putative [Streptococcus sanguinis SK36] gi|125497103|gb|ABN43769.1| Hydrolase, metallo-beta-lactamase superfamily, putative [Streptococcus sanguinis SK36] Length = 560 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 47/144 (32%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y + +I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLY----EINQHTELQFKHLKATFFRTTHSI 145 Query: 163 P------ILQQHGRISSLG-FRFG 179 P I G+I G F+F Sbjct: 146 PEPLGIVIHTPQGKIVCTGDFKFD 169 >gi|219849465|ref|YP_002463898.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] gi|219543724|gb|ACL25462.1| cyclic nucleotide-binding protein [Chloroflexus aggregans DSM 9485] Length = 707 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 42/233 (18%) Query: 51 GSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 G+ ++ D + + L ID V+ +H H DHI G+ L L + + + Sbjct: 234 GTGQPLLFDAAAYLNVRLAYLGLSPRQIDLVVISHLHEDHIAGLPELI---LTGGKRVRL 290 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 A + L A+ D + D ++ G EA + Sbjct: 291 VTAQPIYRSLLR----VLGAMLDLAPAAVAELFDFFPLDPGHALEVNGYRFEATYAVH-- 344 Query: 169 GRISSLGFRFGNVAYCTDVNAFPAESLEKL------------------QNLDFLIIDALK 210 I ++ R G + Y D+ + LE L + + L+ D Sbjct: 345 -SIPTIAVRVGGIGYSGDM-RYDEAWLEHLYRQGQLSATRLAELRRFAEGAEVLVHDMGG 402 Query: 211 NGLHSSHFSLSESLKKIELI--NPKNAILTHMH-VDLDYDMVLKSTPSRVVPA 260 +H++ + + + + + +L H DL + + RV A Sbjct: 403 GAVHTTP-----TAQLLRDLSTKSRRLVLAHTSRRDL---EMSRELAERVEIA 447 >gi|14591185|ref|NP_143261.1| hypothetical protein PH1382 [Pyrococcus horikoshii OT3] gi|3257805|dbj|BAA30488.1| 274aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 274 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 13/77 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL 95 S + + V+VDTG D + + IDA+ TH H DH G+ L Sbjct: 31 SALVEA-----NGYRVLVDTGTDGKVLLNNMSELGISPDDIDALFITHGHYDHTGGLREL 85 Query: 96 RGYFLKQKRPIDVYAAP 112 + +D+YA P Sbjct: 86 LS---ARTEALDIYAHP 99 >gi|257467384|ref|ZP_05631695.1| metal dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|315918514|ref|ZP_07914754.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|313692389|gb|EFS29224.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 614 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L I V TH H DHI I + K + I +Y M + Sbjct: 109 PDF--TFLENNKEKIKGVFITHAHEDHIGAIP---YLYEKIGKDIPIYGGKLTMAFVKSK 163 Query: 122 FR 123 F Sbjct: 164 FD 165 >gi|257462833|ref|ZP_05627239.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|317060460|ref|ZP_07924945.1| Zn-dependent hydrolase [Fusobacterium sp. D12] gi|313686136|gb|EFS22971.1| Zn-dependent hydrolase [Fusobacterium sp. D12] Length = 580 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L I V TH H DHI I + K + I +Y M + Sbjct: 75 PDF--TFLENNKEKIKGVFITHAHEDHIGAIP---YLYEKIGKDIPIYGGKLTMAFVKSK 129 Query: 122 FR 123 F Sbjct: 130 FD 131 >gi|257453140|ref|ZP_05618439.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|317059675|ref|ZP_07924160.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] gi|313685351|gb|EFS22186.1| metal dependent hydrolase [Fusobacterium sp. 3_1_5R] Length = 614 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L I V TH H DHI I + K + I +Y M + Sbjct: 109 PDF--TFLENNKEKIKGVFITHAHEDHIGAIP---YLYEKIGKDIPIYGGKLTMAFVKSK 163 Query: 122 FR 123 F Sbjct: 164 FD 165 >gi|215413723|ref|ZP_03422391.1| hypothetical protein Mtub9_20225 [Mycobacterium tuberculosis 94_M4241A] gi|298527271|ref|ZP_07014680.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497065|gb|EFI32359.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length = 375 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 82/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 74 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 129 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 130 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 189 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 190 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 248 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 249 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 307 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 +N L +SH S + + PK IL+H Sbjct: 308 NAFPRNYLVNSHTSAEQVGEVAAAAKPKQLILSH 341 >gi|86156524|ref|YP_463309.1| Beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85773035|gb|ABC79872.1| Beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 550 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ + AV TH H DH+ + FL ++ P+ VY + L Sbjct: 55 LRERREQVGAVFLTHGHEDHLGALP-----FLLREIPVPVYGTRFTLALLRPRLEEAGVR 109 Query: 129 LDDRTYPP 136 D R P Sbjct: 110 ADLREVRP 117 >gi|85374798|ref|YP_458860.1| coenzyme PQQ synthesis protein B [Erythrobacter litoralis HTCC2594] gi|84787881|gb|ABC64063.1| coenzyme PQQ synthesis protein B [Erythrobacter litoralis HTCC2594] Length = 304 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 71/231 (30%), Gaps = 51/231 (22%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 +LG G G P+I P S + +R + + D P Sbjct: 20 QRELVVLGAGQDAGAPQIGNV----GDEGPDLW---PSAL--ALVDRENGQRYLFDATPA 70 Query: 64 FYMQV-LREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLKQKRP------IDVYA 110 Q+ L +++ ID + TH H H G+ R + VYA Sbjct: 71 ITAQLALLDRIEPPAQGLGIDGIFLTHAHIGHYLGLA-------WLGREAAGASGVPVYA 123 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P + L + + L + + E +PIL H Sbjct: 124 MPRMAEFLRGNGPW--SQLAELGNIALTKMAASE-------FTVLSDEFGVMPILVPHRD 174 Query: 171 I--SSLGFRF----GNVAYCTDV---NAFPAESLEKLQNL----DFLIIDA 208 ++GF Y D+ + F S + L++L D L +DA Sbjct: 175 EYSETVGFFIMTPDQTALYVPDLDSWDEFAEASGQSLEDLVEGFDLLFLDA 225 >gi|322418929|ref|YP_004198152.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320125316|gb|ADW12876.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 252 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 24/205 (11%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYA 110 + ++++D G + +++ I+ +L THPH DHI I L + + + V + Sbjct: 24 DDSLLLDAG-TVGSALDQQEQRRIEHILVTHPHLDHIRSIPLLADNIVVSGFAQKVQVIS 82 Query: 111 APDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + L + L D T P V+ ++ + G H Sbjct: 83 IAEVISALR---SHLMNGLIWPDFTRIPTPQEPVLSYREIRTDEEFRVGDYAVQACRVNH 139 Query: 169 GRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL---------HS 215 + ++G+R + Y D E L L+++ H Sbjct: 140 -TVPAVGYRVTRGGTSLLYTGDT-GPTERIWEVAGELAALVVEVSFPSSMEEIALMTGHL 197 Query: 216 SHFSLSESLKKIELINPKNAILTHM 240 + L++ L K+ + P+ ++TH+ Sbjct: 198 TPALLAKELAKLSRL-PRRILITHL 221 >gi|227503427|ref|ZP_03933476.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] gi|227075930|gb|EEI13893.1| possible metal-dependent hydrolase [Corynebacterium accolens ATCC 49725] Length = 584 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 40/183 (21%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 50 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIDKVKALVVTHAHEDHIGAI----PWL 98 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 99 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVTY------GCF 144 Query: 160 EAIPILQQHGRISSLGFRF----GNVAYCTDVN-----------AFPAESLEKLQNLDFL 204 H +LG GN+ + D+ PA S + +D + Sbjct: 145 RVRFWAVNHSVPDALGIMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLM 204 Query: 205 IID 207 + D Sbjct: 205 LCD 207 >gi|116670887|ref|YP_831820.1| ribonuclease Z [Arthrobacter sp. FB24] gi|116610996|gb|ABK03720.1| RNAse Z [Arthrobacter sp. FB24] Length = 343 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 55/176 (31%), Gaps = 41/176 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG + VP T N R ++ D G Sbjct: 3 ELVVLGT--ASQVP---------TRTRNHNG----------YLLRWDGDGLLFDPGEGTQ 41 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFES 121 Q++ V I + TH H DH +G+ G+ R + P+D++ + Sbjct: 42 RQMIHAGVSASQITRICLTHVHGDHCYGLPGVLSRMVLDGVQHPVDLHFPAAGGDVVRAL 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 LD R +P + PI +E P+ RI + G+R Sbjct: 102 VSLASPGLDLRLHP--------HSGPGPIAP-----GLEVRPLRH---RIDTFGYR 141 >gi|85858176|ref|YP_460378.1| metallo-beta-lactamase superfamily protein [Syntrophus aciditrophicus SB] gi|85721267|gb|ABC76210.1| metallo-beta-lactamase superfamily protein [Syntrophus aciditrophicus SB] Length = 255 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 39/208 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + ILGC S VP + +S + V++D G Sbjct: 1 MNIRILGCHGS-QVP--GCNT--------------TSFLVE--------ENVLIDAGS-I 34 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESF 122 + E+ + +D + TH H DH+ + + ++L++ P+ + + + L Sbjct: 35 TSTLTAEEQVKVDYIFVTHAHLDHVKEMMFMVDNLWYLQKSNPLTIVSIEPVIHALKT-- 92 Query: 123 RYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 + F L D + P V+ + + K G I H + ++ + Sbjct: 93 -HLFNGLIWPDFSSLPNAENPVLRYEILEVGGKRNIGSFAVTAISVNH-TVETVSYVIET 150 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLDFL 204 G++ + D E + +++ L Sbjct: 151 GQGSMIFIGDT-GPTEEIWKVANSIEDL 177 >gi|219115409|ref|XP_002178500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410235|gb|EEC50165.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1343 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 52/248 (20%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL-- 74 GV + G ++ S + ++ RG V++D P + RE + Sbjct: 485 GVTVLGNSHG-------FDKSGSVSGYVLWINGRG----VMIDPPPYSSATLEREGIRPR 533 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 +I ++ TH HADH G + + P+ V P +++SF + AL + Sbjct: 534 TIVGIILTHCHADHDAG-----AFQKVLTGSPVVVITTP----TIYKSFIRKYAALSALS 584 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNA 189 + + + + ++ G L I +GFR ++ + D Sbjct: 585 PALLRHSHRYKPAIIGEALRFQGATFYFTYTLH---TIPCVGFRVEWRGRSMVFTGDHFN 641 Query: 190 FPAESLEK------------------LQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN 231 P + LQ+ D L+ +A G H L L+ + + Sbjct: 642 SPPAIDKLQETGILSKARADDLRNLPLQDTDLLLHEA---GAPPIHTPLEVLLQLPKEVK 698 Query: 232 PKNAILTH 239 K + H Sbjct: 699 -KRLYVVH 705 >gi|311900567|dbj|BAJ32975.1| hypothetical protein KSE_72200 [Kitasatospora setae KM-6054] Length = 218 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 72/198 (36%), Gaps = 25/198 (12%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R+ +V++D G + AVLYTH HADH+ D L Sbjct: 12 RIDSPDGERSVLIDPGCWTEPGA----FAGVRAVLYTHAHADHVD--DDLLVAARAADPE 65 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY P+ L AL T P PI E +++ GG Sbjct: 66 LAVYTHPELAAEL--------AALPGLTGPAPIAVRTGDEFTAGGFDVRAVGGRHAET-- 115 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 + + ++LG+ G + D PA E+ + L++ A SL +++ Sbjct: 116 IDGYPDCANLGYLLGGTYHPGDSLHVPAGPGEE---VRTLLLPAGGPW-----QSLRQAI 167 Query: 225 KKIELINPKNAILTHMHV 242 + + I P++ + H Sbjct: 168 EMVRAIEPEHTVPIHDAH 185 >gi|193078092|gb|ABO13027.2| competence factor involved in DNA uptake [Acinetobacter baumannii ATCC 17978] Length = 810 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 565 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 615 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 616 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 671 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 672 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 725 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 726 LGHHGSKHSS---AYDFLATLKPKLAI 749 >gi|159036436|ref|YP_001535689.1| beta-lactamase domain-containing protein [Salinispora arenicola CNS-205] gi|157915271|gb|ABV96698.1| beta-lactamase domain protein [Salinispora arenicola CNS-205] Length = 209 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 33/174 (18%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPD---CMKHLFESFRYC 125 R + +DAVL TH H DH+ + + ++P+ +Y + L ++ Sbjct: 30 RGALDGVDAVLITHEHPDHV----DVAALAEQRDRQPVVLYGPASLATTLDGLADA---- 81 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 P+ VP+ + + + +L + +V Y Sbjct: 82 --------LVPVEAGTEFTAAGVPVRAYGGRHAVIHPDLPV----VENLAYLIDDVVYHP 129 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + E + ID L +H+ SESL + + P+ A H Sbjct: 130 GDSFVVPEDVP---------IDTLFLPIHAPWAKFSESLDFLRAVAPRRAYALH 174 >gi|16081465|ref|NP_393812.1| hypothetical protein Ta0333 [Thermoplasma acidophilum DSM 1728] gi|10639505|emb|CAC11477.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 407 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +DA+ TH H DHI + + + P D+YA + + R K + YP Sbjct: 47 VDAMFITHSHLDHIGAV----PVYYHKGEP-DLYATQMTLNTMKPLLRDALKVTNIEGYP 101 Query: 136 PIVNPIVIEN-----NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---VAYCTDV 187 + N I + G + A P H S++ ++F + V DV Sbjct: 102 AMFNEDDINSALANMRPARYFESIEVGNMVATPYPAGHIPGSTM-WKFEDGISVTVTGDV 160 Query: 188 NAFPAESLEKLQNL--DFLIID 207 N + + + D LII+ Sbjct: 161 NTIDTYLINGAKPIKTDVLIIE 182 >gi|291549195|emb|CBL25457.1| Zn-dependent hydrolases, including glyoxylases [Ruminococcus torques L2-14] Length = 206 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 14/112 (12%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 P Y+ ++ L + A+ TH H DHI GID F P+ VYA D + + + Sbjct: 34 CPQEYVNYIKNNGLEMKALFLTHGHFDHIMGIDDFLKAF-----PVPVYAGEDELPVIED 88 Query: 121 S---------FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +Y F ++ IE + + + GG +P Sbjct: 89 DRLNVSCMYGPKYAFHGAQPVRDGQVIECAGIEVDVLHTPGHTVGGCCYYLP 140 >gi|269216121|ref|ZP_06159975.1| metallo-beta-lactamase family protein [Slackia exigua ATCC 700122] gi|269130380|gb|EEZ61458.1| metallo-beta-lactamase family protein [Slackia exigua ATCC 700122] Length = 362 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 18/140 (12%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S V + + +++D G + R L I+ VL TH H DH G+ + Sbjct: 16 SVVEDAETGRALLIDCGISKKAFLQRCSETGFDPLRIEGVLVTHEHTDHTKGLGVVLRGL 75 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 K V+A P + R + + + + I Sbjct: 76 AKMGAHPQVFADPSVVCA-------------SRDIADALASLDAQARPFDDSSELTLAGI 122 Query: 160 EAIPILQQHGRISSLGFRFG 179 + P L H ++S GFRF Sbjct: 123 DVFPFLTSHDAVASYGFRFE 142 >gi|324992189|gb|EGC24111.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK405] Length = 560 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ + I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKHLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|222055978|ref|YP_002538340.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221565267|gb|ACM21239.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 258 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 73/239 (30%), Gaps = 57/239 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I T +++D G + + + I+A++ +H H DHI G Sbjct: 14 SLFIE-----NGETKLLLDAGLSAVEILRRLHAIGVEGSEINAIMISHEHQDHIRG---- 64 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 L +K I V + K + Y I E+ Sbjct: 65 -AGALARKLKIPVILSYPTHK-------------EASRYLAKTQVIEFESG-----YSFC 105 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLII----- 206 + P H +GF G + TD+ ++KLQ +I+ Sbjct: 106 FRDLAIDPFPITHDACDPVGFVIESSDGAMGVATDLGIATRLVVDKLQKCRIVIVESNHD 165 Query: 207 -DALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP---SRVVPAF 261 D L NG + H + I ++ H+ + ++ + V A Sbjct: 166 EDMLMNGPYPWH--------LKQRIRSRHG---HLSNNDSAALLEEILHPCLEGVFLAH 213 >gi|28493582|ref|NP_787743.1| hypothetical protein TWT615 [Tropheryma whipplei str. Twist] gi|28572778|ref|NP_789558.1| hypothetical protein TW632 [Tropheryma whipplei TW08/27] gi|28410911|emb|CAD67296.1| conserved hypothetical protein [Tropheryma whipplei TW08/27] gi|28476624|gb|AAO44712.1| unknown [Tropheryma whipplei str. Twist] Length = 545 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 22/172 (12%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++VD G PDF +R+++ ++A++ TH H DHI + Sbjct: 26 DGRILLVDCGVLFPDLQQPGVDLILPDFAP--IRDRLDKVEALVLTHGHEDHIGAV---- 79 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+ + I + +P + + E + + + R P+ V + + + + + Sbjct: 80 PYLLRLRSDIPLIGSPLTLAFVEEKCKEQRLSPNLRRVAPLDRLKVGDFDLEFVSVNHSI 139 Query: 157 GVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 A+ I G I G F+ + + P+ + + +D + D Sbjct: 140 PDAMAVFIRTSAGNIFHTGDFKLDQWPLDSRLTDLPSFARFGAEGVDLFMCD 191 >gi|18310639|ref|NP_562573.1| late competence protein [Clostridium perfringens str. 13] gi|18145320|dbj|BAB81363.1| probable late competence protein [Clostridium perfringens str. 13] Length = 284 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G L + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTNSLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +D + AP ++ + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKF-----DVDYFCAPKVTEN-TDVFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEVYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETQAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|284052845|ref|ZP_06383055.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca] Length = 170 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 62/178 (34%), Gaps = 29/178 (16%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI- 106 R + +I D G + Q L ++ + +TH H DHI G +F PI Sbjct: 2 RVGSQRLIFDGGTGLRVLGQALLAEMPVTAHMFFTHSHWDHIQGF----PFFAPAFVPIN 57 Query: 107 --DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---- 160 ++Y A E + D +P P+ + + + G I Sbjct: 58 TFNIYGAIAPNGSTIEQ-----RLNDQMLHPNFPVPLQVMGAKLNFIDLTIGESIYLEDD 112 Query: 161 --AIPILQQHGRISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLIIDA 208 L H ++G+R AY TD FP L+ +N + LI DA Sbjct: 113 LVIETALLNHPG-EAVGYRVSWKGYTTAYVTDTEHFPYRLDENVLKLARNANVLIYDA 169 >gi|262067401|ref|ZP_06027013.1| putative metallo-beta-lactamase domain protein [Fusobacterium periodonticum ATCC 33693] gi|291378964|gb|EFE86482.1| putative metallo-beta-lactamase domain protein [Fusobacterium periodonticum ATCC 33693] Length = 399 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 43/139 (30%), Gaps = 27/139 (19%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 D VL +H H+DH+ G + I +Y + S Y K Sbjct: 53 KYDGVLISHYHSDHV-------GLATRILPEIQIYMGEKSYEIYKVSNEYMGKE------ 99 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAF 190 + E + G I+ P L H S F + Y D + Sbjct: 100 ------YLKEPKIFKAEEEFFIGDIKITPYLCDHSAFDSYMFLLDCEGKRMLYTGDFRSN 153 Query: 191 PAESLE----KLQNLDFLI 205 +S E KL +D LI Sbjct: 154 GRKSFEPLLRKLPKVDVLI 172 >gi|298491520|ref|YP_003721697.1| hypothetical protein Aazo_2700 ['Nostoc azollae' 0708] gi|298233438|gb|ADI64574.1| conserved hypothetical protein ['Nostoc azollae' 0708] Length = 301 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 35/246 (14%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSIDA-VLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +I D G + ++ ++Q S++A + +T+ ++ I G F+ + Sbjct: 61 AGQHLIFDGGTGLRILGKMWQQQQKSLEAHLFFTNSQSNRIQGFPFFAPAFIAS-NCFHI 119 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y S + C D P P+ + +D+ + G +E + Sbjct: 120 YG---TAASNGASIKQCL--CDQMLQPHFPYPLQVMESDLNFYNLTPGNAVELGEVKITM 174 Query: 169 GRIS----SLGFRFG----NVAYCTDVN---AFPAE--SLEKLQNLDFLIIDALKNGL-H 214 I+ S+G+R ++AY TD++ + L +Q D L+ +A Sbjct: 175 AIINKNQKSIGYRVTWGEHSIAYATDLHKSLDIEEQKQILHIIQGADLLVTNATYTPPTG 234 Query: 215 SSH----FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDG 263 +H + + + K +++H H D D L V+ A +G Sbjct: 235 KNHEYAELFWKTPVDLAQTADVKRLVISH-HHPDDNDTFLDKIQDQVKSAFPNVLLACEG 293 Query: 264 MQFSSP 269 M S Sbjct: 294 MLLSVE 299 >gi|254466982|ref|ZP_05080393.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium Y4I] gi|206687890|gb|EDZ48372.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium Y4I] Length = 555 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 48/195 (24%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + + V+VD G F L+E+ ++ + TH H D Sbjct: 21 AYVYGYGPKDKERLVLVDLGVTFPDMDTTPGVDLIMPDITWLKERTDRLEGIFITHGHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI I + G + VYA N ++ Sbjct: 81 HIGAIAHMYG-----HLNVPVYARAFTANLARRKMEEAGHDP--------ANVHTVQAWP 127 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 + G H S G G V + D F E Sbjct: 128 E----VTRLGPFTIGVAPMSHSIPESGGLVIDSPAGRVVHTGDFKLDANPLVGEPFDPEM 183 Query: 195 LEKL--QNLDFLIID 207 ++ + L+ D Sbjct: 184 WAQIAGDGIQALVCD 198 >gi|156763836|emb|CAO99120.1| putative hydrolase [Nicotiana tabacum] Length = 832 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 33/132 (25%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 +D LG G+S+ P R SS+ + S+ G +++D G Sbjct: 479 RDDLEIVFLGTGSSI----------------PSKYRNVSSIYFNLFSKGG----LLLDCG 518 Query: 62 PDFYMQVLR--------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-----V 108 Q+ R V ++ + +H HADH G+ + + + V Sbjct: 519 EGSLAQLKRRYGINGADSAVRNLKCIWISHIHADHHAGLARILALRRDLLKGVPHEPMLV 578 Query: 109 YAAPDCMKHLFE 120 + L + Sbjct: 579 IGPEQVGEFLKD 590 Score = 35.1 bits (80), Expect = 9.7, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 30/105 (28%), Gaps = 22/105 (20%) Query: 157 GVIEAIPILQQHGRISSLGFRFG--------------NVAYCTDVNAFPAESLEKLQNLD 202 G++ I H + G V Y D L Sbjct: 681 GLVRFISFPVVHCP-GAFGIILESAERMNCGKVVPGWKVVYSGDTRPCSEVIEASL-GAT 738 Query: 203 FLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 LI +A L+ + +H ++ E+++ ILTH Sbjct: 739 ILIHEATFEDGLLEEAITRNHSTIKEAIEVGRSAGAYRIILTHFS 783 >gi|298708429|emb|CBJ48492.1| conserved unknown protein [Ectocarpus siliculosus] Length = 343 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 54 TTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +++DTG P + + +DA+L TH HADH+ G+ +R Sbjct: 90 RRILIDTGEGKAGFVPHLLDVMKQAGCEMLDAILLTHWHADHVGGVSEIR 139 >gi|72077009|ref|XP_788875.1| PREDICTED: similar to elaC homolog 1 [Strongylocentrotus purpuratus] gi|115935465|ref|XP_001189573.1| PREDICTED: similar to elaC homolog 1 [Strongylocentrotus purpuratus] Length = 362 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 33/154 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG ++ P S +S R ++D G Sbjct: 1 MDLIFLGTASAHPSP---------------------SRGVSGTVLRSEREAWLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDG----LRGYFL---KQKRPIDVYAAPDCM 115 +Q++R V I + TH H DH G+ G L F+ ++ + +Y Sbjct: 40 QIQLMRSNVRPGRITKIFITHLHGDHSFGLPGLMCTLSAAFMDPDREGSIMHIYGPQGLR 99 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 K++ S + + +Y +V+ + + + + P Sbjct: 100 KYVRVSLE---LSRSELSYSYVVHELQVPDTEFP 130 >gi|317470820|ref|ZP_07930201.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316901647|gb|EFV23580.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 268 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 84/287 (29%), Gaps = 64/287 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G ++ V + + R +VD G Sbjct: 4 ELIMLGTGNAM-VTKCYNTC---------------------FALRNEEEYFLVDAGGGNG 41 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYAA 111 Q+ + Q+ I + TH H DHI G + +++ + +Y Sbjct: 42 ILSQLEKAQIPFEQIRHMFLTHAHTDHILG----AVWIIRKAAAMMLAETYQGRFTIYCH 97 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + K L E + + + I +V + + Sbjct: 98 DEAAKVLRE----ICELTLAGKFLKFL-GSKIRIQEVKDGEGIQISDMCVRFFDIHSTKA 152 Query: 172 SSLGFRFG-----NVAYCTDVNAFPAESL--EKLQNLDFLIIDAL-----KNGLHS---S 216 GFR ++ D P SL ++ D+++ +A ++ H Sbjct: 153 KQFGFRTDLEKDISLVCLGDE---PYNSLCKPYVEGADWMLCEAFCLYGMRDIFHPYEKH 209 Query: 217 HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 H + ++ E + +N +L H D D K V + G Sbjct: 210 HSTALDAGNLAEKLKVRNLVLYH-TEDTDLKNRKKQYTKEVKLLYSG 255 >gi|289522745|ref|ZP_06439599.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504581|gb|EFD25745.1| metallo-beta-lactamase family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 292 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 23/140 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I S R +++DTG + M++L Q SIDAV+ +H H DH G+ + Sbjct: 33 SLLIEVKSGR-EYRRILMDTGQSGLPVLYNMELLGIQPSSIDAVVLSHCHYDHTKGLVEI 91 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 K+ I V A PD F+ + ++ ++ I I + +++A Sbjct: 92 LKA--IGKKDIPVIAHPD-----------IFR--PNYSFDSFIHNIGITRENGKEAIEAA 136 Query: 156 GGVIEAI--PILQQHGRISS 173 GGV+ P G ++ Sbjct: 137 GGVLMLTKEPFAIMPGVTTT 156 >gi|225573328|ref|ZP_03782083.1| hypothetical protein RUMHYD_01519 [Blautia hydrogenotrophica DSM 10507] gi|225039317|gb|EEG49563.1| hypothetical protein RUMHYD_01519 [Blautia hydrogenotrophica DSM 10507] Length = 291 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 80/256 (31%), Gaps = 58/256 (22%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGI------- 92 ++ + R + +T+++D G ++E+ ID + +TH H DHI G+ Sbjct: 8 WLTALMTRYNGSTLLIDCGEGT-QVAIKEKGWSFKPIDVICFTHFHGDHISGLPGLLLTM 66 Query: 93 ---DGLRGYFLKQKR----------------PIDV-YAAPDCMKHLFESFRY-------- 124 D L R P + Y + + E Y Sbjct: 67 GNADRTEPLTLVGPRGVERVVNALRIIAPELPFPIQYIELTKAEEVLELNGYRITAFRVN 126 Query: 125 ----CFKALDDRTYPPIVNPIVIENNDVP--ICMKSAGGVIEAIPILQQHGRISSLG-FR 177 C+ + + +++P + G + + LG R Sbjct: 127 HNVVCYGYSLEILRKGKFSVENAHAHEIPQRFWSRLQNGE-TIEEAGKTYTPDMVLGPDR 185 Query: 178 FG-NVAYCTDVNAFPAESLEK-LQNLDFLIIDALKNGLHS-------SHFSLSESLKKIE 228 G V Y TD P ES+ + N D I + + G H + +E+ + Sbjct: 186 KGIKVTYSTDTR--PTESIARNAVNSDLFICEGMYGGKEKEAKAKEYKHMTFTEAATLAK 243 Query: 229 LINPKNAILTHMHVDL 244 K LTH L Sbjct: 244 AAKVKEMWLTHYSPSL 259 >gi|299537849|ref|ZP_07051138.1| ribonuclease Z [Lysinibacillus fusiformis ZC1] gi|298726828|gb|EFI67414.1| ribonuclease Z [Lysinibacillus fusiformis ZC1] Length = 310 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 35/180 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA G+P + +S + ++ + S + D G Sbjct: 1 MQLHFLGTGA--GMPS---------------KERNTSALMVKLLDEVSEM-WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + + + TH H DHI G+ G R + P+ ++ + + Sbjct: 43 QHQILHTSLKPRKVTKIFITHLHGDHIFGLPGFLSSRSFQ-GGDEPLTIFGPSGLQQWIE 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 ++ + + P+ I + A I A + + G+R Sbjct: 102 QTLA--------LSKTHLTYPLRFVEVQEGIIFEDAHFTIYAKELRH---VVPCYGYRIE 150 >gi|258592685|emb|CBE68994.1| membrane protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 414 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 35/123 (28%) Query: 36 RRTRSSLKISRVSERGSN------------------TTVIVDTG---PDFYMQV--LREQ 72 R TR+SL+I+ V + TV+ DTG P + L Sbjct: 174 RATRTSLRITVVYNNVPHAPGLATAWGFAAMVAAGADTVLFDTGGDGPTLLANLRKLDID 233 Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 S+DA++ +H H DH G+D FL ++ + VY SF F +R Sbjct: 234 PDSVDAIVLSHIHGDHTGGLDD----FLVRRPNVTVYLPQ--------SFPETFVRAVER 281 Query: 133 TYP 135 Sbjct: 282 RGA 284 >gi|47565468|ref|ZP_00236509.1| mRNA 3'-end processing factor, putative [Bacillus cereus G9241] gi|47557458|gb|EAL15785.1| mRNA 3'-end processing factor, putative [Bacillus cereus G9241] Length = 419 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|297526898|ref|YP_003668922.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] gi|297255814|gb|ADI32023.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] Length = 305 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 10/72 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL 95 S+ + R ++ DTGPD + + SID V+ +H H DH+ G+ + Sbjct: 93 SILVDVPGLR-----ILFDTGPDPDVLRRNMEALGIDPRSIDVVVISHEHGDHVGGLPYI 147 Query: 96 RGYFLKQKRPID 107 K I Sbjct: 148 ASLNPGIKVYIP 159 >gi|260881780|ref|ZP_05405209.2| conserved hypothetical protein [Mitsuokella multacida DSM 20544] gi|260847871|gb|EEX67878.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] Length = 274 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 76/261 (29%), Gaps = 58/261 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 T+LG G ++ + ++ + D G Sbjct: 8 KLTMLGTGNAM---VTKC--------------YNTCFYVTL----DDGALFLTDAGGGNG 46 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI----------DVYAA 111 Q+ + TH H DH+ G+ + +++ + +Y Sbjct: 47 ILRQLELTGFDYQKCHHMFVTHGHTDHVLGV----IWVMRKVADLMNKGKYEGEFHIYCH 102 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L + K D + +++ V + G ++ + Sbjct: 103 DVVREMLLTMTKMTLKKKDFARVGTSIFLHELKDGSV---VNFEG--VQLTAFDILSTKA 157 Query: 172 SSLGF--RFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDAL-----KNGLHS---SHF 218 G+ RF + D + + D+L+ +A ++ +H Sbjct: 158 KQFGYELRFADGLRFTCLGD-EPYNEHDEAYAKGADWLLAEAFCKYGDRDTFKPYEKNHS 216 Query: 219 SLSESLKKIELINPKNAILTH 239 ++ E+ + E + KN +L H Sbjct: 217 TVKEASELAEKLGVKNLVLYH 237 >gi|187932812|ref|YP_001887650.1| hypothetical protein CLL_A3478 [Clostridium botulinum B str. Eklund 17B] gi|187720965|gb|ACD22186.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund 17B] Length = 267 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 80/263 (30%), Gaps = 63/263 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 T+LG G+++ V + + N ++D G Sbjct: 3 SITMLGTGSAM-VTKCYNTC---------------------FTLSKDNEYFLIDAGGGNT 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPI---------DVYAA 111 + + + I + +H H DH+ G + ++ + ++Y Sbjct: 41 ILSNLEKANIKINQIHNMFISHNHNDHVLG----SVWVIRAVANRMLNDKYNGIFNIYCT 96 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 ++ + Y + + + + IENN + I + Sbjct: 97 KKSIEAIKTICSYVLQNKFLKLFDDKIIFNEIENN-----TEVNILGRRTIFFDIHSTKE 151 Query: 172 SSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHSS 216 GF+ + + D + + +++D+L +A H Sbjct: 152 LQFGFKTFLSNGKTLTFLGD-EPYREMVKDFCEDVDYLFHEAFCLYSQKELFKPYEKH-- 208 Query: 217 HFSLSESLKKIELINPKNAILTH 239 H ++ ++ +++ KN IL H Sbjct: 209 HATVKDACNNAKILAVKNIILYH 231 >gi|150025753|ref|YP_001296579.1| ribonuclease Z [Flavobacterium psychrophilum JIP02/86] gi|149772294|emb|CAL43772.1| Ribonuclease Z [Flavobacterium psychrophilum JIP02/86] Length = 301 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 33/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG C P+ +S + N ++D G Sbjct: 1 MNLTILG----------------CYAATPRTFTNPTSQVLEI-----RNRLFLIDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMKHLFE 120 +Q+ + ++ +I+ + +H H DH +G+ GL F L + + VY + + Sbjct: 40 QVQLRKNKIKFSAINHIFISHLHGDHFYGLIGLISTFNLLNRNNNLTVYGPKGIQEIIKL 99 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 L P +E + + I +H R+ + GF F Sbjct: 100 -------QLKLSNSWPQYELHFVELTSTKSEIIFEDDKVIVKTIPLKH-RVYTNGFLFQ 150 >gi|145527784|ref|XP_001449692.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417280|emb|CAK82295.1| unnamed protein product [Paramecium tetraurelia] Length = 828 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 34/169 (20%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 GV + G +PK +S I ++ RG ++VD P + + + I Sbjct: 309 GVTVLGCSHG----FDPK---GSTSGYIFWINGRG----IMVDPPPYTSYHLKKMGIPPI 357 Query: 77 --DAVLYTHPHADHIHG-----IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 A++ +H HADH G +D + + + + SF + A+ Sbjct: 358 MISAIIISHCHADHDAGAFHKILDDSKVEII-------------TTRTIMYSFLRKYSAI 404 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + I + + + + + G E H I +GFR Sbjct: 405 SNLSQDQIKSLFIFRPAILGVPLNIYGAEFEF--FYAFHS-IPCIGFRV 450 >gi|109897600|ref|YP_660855.1| beta-lactamase-like [Pseudoalteromonas atlantica T6c] gi|109699881|gb|ABG39801.1| beta-lactamase-like protein [Pseudoalteromonas atlantica T6c] Length = 279 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 70/221 (31%), Gaps = 31/221 (14%) Query: 49 ERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 E +I+D G Q L + I +L TH H DHI G + Q+ Sbjct: 32 ELNDGNDIIIDAGTGIRTLGQKLAAKEGDIH-LLLTHNHWDHIQGFPFFTPIYQPQRN-- 88 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN--PIVIENNDVPICMKS-AGGVIEAIP 163 ++ P + + + +P N P I P ++ G + Sbjct: 89 -IFITPG--QTTLAEHDNILRQMSGSYFPVQFNTLPSAIALEAKPDNLRQWHIGEAKIQR 145 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPA--------ESLEKLQNLDFLIIDA--- 208 H S + V Y TD +P + +E ++ D +I DA Sbjct: 146 QKINHPGGGS-AYCITADGSKVVYITDNELYPPYKKSTDFLDWVEFARDADLVIHDAQYM 204 Query: 209 ---LKNGLHSSHFSLSESLKKIELINPKN-AILTHMHVDLD 245 + H E++K K A+ +H H D Sbjct: 205 LTDMPGKAGWGHSVAEEAVKLSMACRAKRLALYSHDHTRTD 245 >gi|324990363|gb|EGC22301.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK353] gi|324994287|gb|EGC26201.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK678] gi|325688625|gb|EGD30642.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK72] gi|325689483|gb|EGD31488.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK115] gi|325693802|gb|EGD35721.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK150] gi|325697872|gb|EGD39756.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK160] gi|327459105|gb|EGF05453.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1057] gi|327459507|gb|EGF05853.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1] gi|327490707|gb|EGF22488.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK1058] Length = 560 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ + I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKHLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|323353506|ref|ZP_08088039.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|322121452|gb|EFX93215.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis VMC66] gi|327472920|gb|EGF18347.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK408] Length = 560 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ + I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKHLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|320450041|ref|YP_004202137.1| ribonuclease J 1 [Thermus scotoductus SA-01] gi|320150210|gb|ADW21588.1| ribonuclease J 1 [Thermus scotoductus SA-01] Length = 576 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCMKHLFES 121 + L E I A + TH H DHI G+ + ++ + +Y A +K E Sbjct: 78 RVDYLIENRHLIKAWILTHGHEDHIGGLPFILPMVFGKESQVPIYGAKLTLGLLKGKLEE 137 Query: 122 FRYCFKALDDRTYPP-----IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F + + + P + ++ + + G++ P+ G I G Sbjct: 138 FGLRPGSFNLKEISPDDRISVGRYFTLDLFRMTHSIPDNSGLVIRTPV----GTIVHTGD 193 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 F+ ++ + + + LI D A + G S +++ L ++ P Sbjct: 194 FKLDATPIDGKLSHLAKVAQAGAEGVLLLIADSTNAERPGYTPSEMEIAKELDRVIARAP 253 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 254 GRVFVTTFASHIH 266 >gi|227530171|ref|ZP_03960220.1| metallo-beta-lactamase [Lactobacillus vaginalis ATCC 49540] gi|227349924|gb|EEJ40215.1| metallo-beta-lactamase [Lactobacillus vaginalis ATCC 49540] Length = 620 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L E I + TH H DHI G+ F Q Sbjct: 36 IIIDCGVLFPEDELLGVDYVIQNYDYLIENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 91 KVNAPIYAGPFAMSLIKGKLEEKHLLRDAELHEINEFDEVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V P +L+++ L Sbjct: 151 GVAVHTPQGTIVQTGDFKFD----LTPVGHLPGPNLQQMAKL 188 >gi|90417828|ref|ZP_01225740.1| metallo-beta-lactamase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90337500|gb|EAS51151.1| metallo-beta-lactamase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 552 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 66/214 (30%), Gaps = 41/214 (19%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 IS ++ PD + E + ++ TH H DH + L K Sbjct: 39 ISFAGADFPGVDLVF---PDIR--FIEELGDKLKGIVITHAHEDHYGALLDLWP-----K 88 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + VYA L + P + D + G E Sbjct: 89 MKVPVYATAFTAAMLA-------AKREGEPGAPKIPVTQFSAGD-----RFKVGPFEIEA 136 Query: 164 ILQQHGRIS--SLGFRF--GNVAYCTDVNAFP---------AESLEKL--QNLDFLIID- 207 I H +L R G V + D P + L ++ + + +I D Sbjct: 137 INVTHSIPEPVALAIRSPAGTVVHTGDWKIDPTPALGAPTDEKRLREIGDEGVLAMICDS 196 Query: 208 --ALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 AL+ G+ S +S SL + I + A+ T Sbjct: 197 TNALREGVSPSESEVSASLGEIIRGAKGRVAVTT 230 >gi|70939745|ref|XP_740376.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56518048|emb|CAH75008.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 414 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 70/219 (31%), Gaps = 51/219 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S +P S I + + +VI+D G Sbjct: 211 SFHFLGTGCS--IPSAF---------------RNVSGIILNIQKD---FSVILDFGEGSL 250 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQKRPIDVYAAPD 113 Q+ E + SI + +H HADH GI +R P + P Sbjct: 251 YQLYWISKSWIQFTESIKSIKVIFISHAHADHHVGIYYFLYIRKILFPHLNP-PLILIPK 309 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMKSAGGVIEAIPILQQHGRIS 172 +K+ F F ++ R I+ ND+ I + S + H + Sbjct: 310 TLKNWMNLFNELFLDIEMR--------IIYNENDLEIKEIISEDNFLTLHLFKVNHIK-E 360 Query: 173 SLGFR-----FGNVAYCTDVNAFP-AESLEKLQNLDFLI 205 S G + G++ Y D P ++ + LI Sbjct: 361 SYGIKLESKDIGSIVYSADTR--PCDNVKRFAKDCNILI 397 >gi|327468630|gb|EGF14109.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis SK330] Length = 560 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ + I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKHLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|229155368|ref|ZP_04283478.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 4342] gi|228628083|gb|EEK84800.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 4342] Length = 415 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 16 KNKETKIVFDCGINRSYEDSYPKIEREVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 74 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 75 ---IWTTRYTKEQL 85 >gi|256390641|ref|YP_003112205.1| beta-lactamase domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256356867|gb|ACU70364.1| beta-lactamase domain protein [Catenulispora acidiphila DSM 44928] Length = 330 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 77/326 (23%), Gaps = 92/326 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG + VP N R E+G + D G Sbjct: 4 ELVILGT--ASQVP---------TRYRAHN------AYFLRFDEQG----FLFDPGEGAQ 42 Query: 66 MQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 Q+ V I + TH H DH G+ G+ + + + H Sbjct: 43 RQMQFAGLSVSEITRLCVTHFHGDHALGLPGI--LQRMSLDDVP----HEVVCHFPGEHE 96 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 F+ L P + + G + HG + G+R Sbjct: 97 EYFERL-RFATPHHARAKIATQPACGVRSYPLDGGLTLTVAPLDHG-MPCQGYRLDEADG 154 Query: 180 ------------------------------------------NVAYCTDVNAFPAESLEK 197 + A+ D P + Sbjct: 155 VRMLPRKLAAACIKGPDISRLRAEGRLGDVRLEDVSVPRPGQSFAFLMDTRRCPGAE-QL 213 Query: 198 LQNLDFLIIDALKNGLHS------SHFSLSESLKKIELINPKNAILTHMHVDLDYDM--- 248 +D L+++A H + ++ + + +LTH D Sbjct: 214 AAGVDLLVVEATFLDSEEEQAGQFGHLTARQAARLAADAGVRELVLTHFSQRYPVDEAPA 273 Query: 249 -----VLKSTPSRVVPAFDGMQFSSP 269 + + A D M+ P Sbjct: 274 RYLAQAAEEFSGPIHIAEDLMRIPFP 299 >gi|215261117|pdb|2ZDF|A Chain A, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261118|pdb|2ZDF|B Chain B, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261119|pdb|2ZDF|C Chain C, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261120|pdb|2ZDF|D Chain D, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311938|pdb|3IDZ|A Chain A, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311939|pdb|3IDZ|B Chain B, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311940|pdb|3IDZ|C Chain C, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311941|pdb|3IDZ|D Chain D, Crystal Structure Of S378q Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|55980221|ref|YP_143518.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] gi|81600562|sp|Q5SLP1|RNSE_THET8 RecName: Full=Ribonuclease TTHA0252 gi|301598475|pdb|3IEK|A Chain A, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598476|pdb|3IEK|B Chain B, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598477|pdb|3IEK|C Chain C, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598478|pdb|3IEK|D Chain D, Crystal Structure Of Native Ttha0252 From Thermus Thermophilus Hb8 gi|301598479|pdb|3IEL|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598480|pdb|3IEL|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598481|pdb|3IEL|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598482|pdb|3IEL|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Ump gi|301598483|pdb|3IEM|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598484|pdb|3IEM|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598485|pdb|3IEM|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|301598486|pdb|3IEM|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8 Complexed With Rna Analog gi|55771634|dbj|BAD70075.1| metallo-beta-lactamase superfamily protein [Thermus thermophilus HB8] Length = 431 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|323168564|gb|EFZ54244.1| ribonuclease Z [Shigella sonnei 53G] Length = 294 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 75/273 (27%) Query: 37 RTR--SSLKISRVSERGSNTTVIVDTGPDFYMQVL--REQVLSIDAVLYTHPHADHIHGI 92 RTR +++ ++ S + D G Q+L +D + +H H DH+ G+ Sbjct: 4 RTRNVTAILLNLQHPTQSGL-WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGL 62 Query: 93 DGLRGYFLKQK--RPIDVYAAP-------------------------------------- 112 GL +P+ +Y Sbjct: 63 PGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRK 122 Query: 113 ---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPIL 165 M+H E + Y +++ P +N ++ VP AG I Sbjct: 123 VTAYPMEHPLECYGY---RIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGR 179 Query: 166 QQHG----RISSLG---FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNG 212 Q +G G FG+ C +L+ + +D ++ +A Sbjct: 180 QINGADYLAAPVPGKALAIFGDTGPC-------DAALDLAKGVDVMVHEATLDITMEAKA 232 Query: 213 LHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 H S ++ I+TH+ D Sbjct: 233 NSRGHSSTRQAATLAREAGVGKLIITHVSSRYD 265 >gi|289580012|ref|YP_003478478.1| KH-domain/beta-lactamase-domain protein [Natrialba magadii ATCC 43099] gi|289529565|gb|ADD03916.1| KH-domain/beta-lactamase-domain protein [Natrialba magadii ATCC 43099] Length = 644 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 51/164 (31%), Gaps = 30/164 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD----------FYMQVLREQVLSIDAVLYTHPHADH 88 R+S +S T ++VD G + +IDAV+ TH H DH Sbjct: 195 RASFILSTP-----ETRILVDCGDKPGAEGEVPYLHAPEAFGAGPETIDAVVLTHAHLDH 249 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENND 147 K +Y + + Y A + PP + +V E Sbjct: 250 SA----FIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVAAKEGRTPPYDSEMVREA-- 303 Query: 148 VPICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 + C+ G + I + H LG F G+ Y Sbjct: 304 IKHCIPLEYGDVTDIAPDVKLTFHNAGHILGSAVSHFHIGDGLY 347 >gi|218438390|ref|YP_002376719.1| beta-lactamase [Cyanothece sp. PCC 7424] gi|218171118|gb|ACK69851.1| beta-lactamase domain protein [Cyanothece sp. PCC 7424] Length = 253 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 33/231 (14%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ V N + L I+ N +++D G D Sbjct: 1 MKLLFLGSGSAFTV--------------GSNNFQSNLLLITE-----DNKKLLIDCGSDI 41 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPID---VYAAPDCMKHLF 119 + + D + +H H+DHI G+ G K + +Y + D + L+ Sbjct: 42 RFSLHEIGLSYADITDIYISHLHSDHIGGL-EYIGLCSKFDPRCEKPNLYVSKDIVSDLW 100 Query: 120 ES---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + F D + ++N + V++ I + + + G Sbjct: 101 DRSLSGGMRFVEGDIKNLNSFFEVYPLKNRGYFVWENVKFHVVKVTHINTGYFIMPTYGL 160 Query: 177 RFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-HFSLSE 222 F + TD E D + D + +S H E Sbjct: 161 FFELNNTKILLTTDTQLCLDMLEEYYTQADIIFHDCETSKFPTSVHAHYQE 211 >gi|320159921|ref|YP_004173145.1| hypothetical protein ANT_05110 [Anaerolinea thermophila UNI-1] gi|319993774|dbj|BAJ62545.1| hypothetical protein ANT_05110 [Anaerolinea thermophila UNI-1] Length = 253 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 82/248 (33%), Gaps = 37/248 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 S+ + VI+D G F + +R + +H H DH+ G+ L Sbjct: 23 PSVLVQAPDFD-----VILDAGYGFAKLDRFIRGDRPAF--CFLSHFHLDHLIGLHTLAK 75 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 Y + + + P L + P+ ++E I G Sbjct: 76 YQFQHG--LTIIGQPGTKWALDSLLSPVYSVPLTGLRYPV---HIVETQPGWIE----GL 126 Query: 158 VIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALK--N 211 EA + H + G+R +AYCTD + +++ + D L+ + + Sbjct: 127 PFEAQALPLIHSQ-PCFGYRLQIAGKTLAYCTDT-GYCENAVKLARQADLLLTECSQAPG 184 Query: 212 GLHS---SHFSLSESLKKIELINPKNAILTHMHVD--------LDYDMVLKSTPSRVVPA 260 H+ H S +E+ + + +L H + + + S V Sbjct: 185 TPHNDEWPHLSPTEAARIAREAEARQLVLIHFDPTQYPSLEDRIHAETEARKVFSSVTAG 244 Query: 261 FDGMQFSS 268 D MQF+ Sbjct: 245 RDEMQFTL 252 >gi|317969034|ref|ZP_07970424.1| ribonuclease Z [Synechococcus sp. CB0205] Length = 295 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 10/128 (7%) Query: 56 VIVDTGPDFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP--IDVYAA 111 + D G Q LR +V + V TH H DH G+ GL ID+Y Sbjct: 12 WLFDCGEGTQHQFLRSELRVSQLRRVFITHMHGDHTFGLPGLLASLGLAGTCSGIDLYGP 71 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 +L R + YP + + + I H R+ Sbjct: 72 DPLRDYLEGVMR---TSSMRIGYP--LRSHRVTEAARTGALLLDDDDITVRCTALIH-RV 125 Query: 172 SSLGFRFG 179 + +R Sbjct: 126 PAFAYRVE 133 >gi|323494414|ref|ZP_08099523.1| putative exonuclease [Vibrio brasiliensis LMG 20546] gi|323311344|gb|EGA64499.1| putative exonuclease [Vibrio brasiliensis LMG 20546] Length = 439 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 8/76 (10%) Query: 45 SRVSERGSNTTVIVDTGP----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S R SN V++D G D + + ++ ++ TH H DHI I L Sbjct: 15 SCHEFRHSNQAVLIDCGLFQGTDARSLEVDFPIKQLNGLILTHSHVDHIGRIPWLLAAGF 74 Query: 101 KQKRPIDVYAAPDCMK 116 Q ++ + + Sbjct: 75 NQ----PIFCSEATAE 86 >gi|295697809|ref|YP_003591047.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] gi|295413411|gb|ADG07903.1| beta-lactamase domain protein [Bacillus tusciae DSM 2912] Length = 261 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G +Q + AV+ TH H DH+HG+ ++ + Sbjct: 21 DDVRLLIDAGISARRLDRSLQQHGVNPDQLTAVVVTHEHRDHVHGLR-----VFARRHAV 75 Query: 107 DVYAAPDCMKHL 118 ++A L Sbjct: 76 PIWATGGTWTEL 87 >gi|314936334|ref|ZP_07843681.1| metallo-beta-lactamase family protein [Staphylococcus hominis subsp. hominis C80] gi|313654953|gb|EFS18698.1| metallo-beta-lactamase family protein [Staphylococcus hominis subsp. hominis C80] Length = 208 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 14/122 (11%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + A+L TH H DHI +D + K + VY + L + Sbjct: 40 LNQINKPLKAILLTHAHFDHIGALDDVLS-----KYDVPVYMHKEEFSFLTD------PE 88 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG---FRFGNVAYCT 185 + + + + P+ + I+ H S G + F + A Sbjct: 89 KNGSSKFKQYGMPLTTSKAQPMALDEGNFTIDEFKFNVIHTPGHSPGSLTYVFDDFAVVG 148 Query: 186 DV 187 D Sbjct: 149 DT 150 >gi|285017402|ref|YP_003375113.1| hypothetical protein XALc_0605 [Xanthomonas albilineans GPE PC73] gi|283472620|emb|CBA15125.1| hypothetical protein XALc_0605 [Xanthomonas albilineans] Length = 252 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 23/232 (9%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPI 106 ER + +D G + A+ TH H DH+ G + L YF ++ + Sbjct: 27 ERDGRPWLSIDCGGEGLSAYQAHYGAMPQALFVTHVHLDHVAGFERLFVDSYFSERCGKV 86 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y + L L + +I D G +E P+ Sbjct: 87 RLYVPATVLPLLHRRVADYPNVLAEGGANFWDAFQLIAVGDAFWHD---GVRLEVFPVR- 142 Query: 167 QHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH--SSHFSLSES 223 H ++ G R G + + D P + + + D GLH SH + + Sbjct: 143 HHWPETAYGIRLPGALVWSGDTRPIPEMLNRYAGDGELIAHDC---GLHGNPSHTGVDD- 198 Query: 224 LKKIELINP----KNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 +E P + +L H D +++ A+ G + P P Sbjct: 199 ---LEREYPAELLRRTMLYHYASTEDAEVLRTR---GHRVAWPGECVALPAP 244 >gi|145593392|ref|YP_001157689.1| beta-lactamase domain-containing protein [Salinispora tropica CNB-440] gi|145302729|gb|ABP53311.1| beta-lactamase domain protein [Salinispora tropica CNB-440] Length = 209 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 59/172 (34%), Gaps = 29/172 (16%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 R + +DAVL TH H DH+ + + P +Y P L Sbjct: 30 RAALDEVDAVLITHEHPDHV----DVAALTEQHDREPFVLYGPPSLAAAL---------- 75 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC-TDV 187 D + E + +++ GG H + N+AY DV Sbjct: 76 -DGLVTAFVPVEAGAEFTAAGVAVRAYGGR-----HAVIHPDLPV----VENLAYLIDDV 125 Query: 188 NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 P +S Q++ +D L +H+ SESL + + P+ A H Sbjct: 126 VFHPGDSFVVPQDVP---VDTLFLPIHAPWAKFSESLDFLRAVAPRRAYALH 174 >gi|325119038|emb|CBZ54590.1| Ribonuclease Z, related [Neospora caninum Liverpool] Length = 1027 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 86/284 (30%), Gaps = 72/284 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG GA+ P R + + ++ ++ ++++D G Sbjct: 667 SLTLLGTGAAA----------------PSQYRNVAGILLAIRAD----LSLVLDFGEGSL 706 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVYAAPD 113 Q+ + + SI V +H HADH G + R P V AP Sbjct: 707 AQLYSTCHSWQEFLDVISSIRIVFISHCHADHHLGVCTLLEFRAAMFPHLLP-PVLLAPA 765 Query: 114 -------CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP--- 163 + F+ + P + EN + + + +P Sbjct: 766 KLQAWLSFYDRRITRIPHRFRCSESLVDLPQAHGETAENEERSASSFGSVSQLLDVPASD 825 Query: 164 -----ILQQHGRISSLGFRFG--------------NVAYCTDVNAFP-AESLEKLQNLDF 203 H S G R +V Y D P + + +N Sbjct: 826 VQLRATPVSH-IPHSFGLRVDFKIPSLHGNSHEDFSVVYSGDTR--PCQQLFDLARNATV 882 Query: 204 LI-----IDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 LI DAL + + H SLSE ++ N +LTH Sbjct: 883 LIHEATFEDALIQEAIEKRHSSLSEVVRAALACRCNNLVLTHFS 926 >gi|255524630|ref|ZP_05391583.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255511654|gb|EET87941.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 827 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 54/185 (29%), Gaps = 63/185 (34%) Query: 53 NTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHG----------- 91 N +++D G PDF ++EQ IDA++ +H H DHI Sbjct: 23 NKNILLDCGIRQGASKDPLPDFRT--IQEQ-GGIDAIIISHAHMDHIGSLPIISKEYPGA 79 Query: 92 ---------------IDGLRGYFLKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTY 134 + ++ I +YA D L F Y Sbjct: 80 KIYANNMTKDLMKVLLYDSLKIMKNREAEIPLYAEVDVENMLNRIFTINYM--------- 130 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 V + E+ + + I G + Y D + F ++ Sbjct: 131 ---VEFPIFEDIKITFYTAGHIAGASCVYITTPEGSLF----------YSGDFSVFSQKT 177 Query: 195 LEKLQ 199 +E L+ Sbjct: 178 VEGLK 182 >gi|222153722|ref|YP_002562899.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222114535|emb|CAR43458.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 560 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + D Sbjct: 65 NIDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLLRDS 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFGNVAYCTDV 187 + Y I + + ++ + I + H G+I G F+F + D Sbjct: 120 KMYE-INHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKF-DFTPVGDP 177 Query: 188 NAF 190 Sbjct: 178 ADI 180 >gi|114778014|ref|ZP_01452914.1| hypothetical protein SPV1_05412 [Mariprofundus ferrooxydans PV-1] gi|114551620|gb|EAU54173.1| hypothetical protein SPV1_05412 [Mariprofundus ferrooxydans PV-1] Length = 552 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 31/135 (22%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + VIVD G F L E L I A++ TH H DHI G+ L Sbjct: 27 DDDAVIVDCGMGFPEPGQHGVDIVVPDIAALDELGLKIHALILTHGHEDHIGGVPILLP- 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + VY + + L + Y + + + +PI G Sbjct: 86 ----RLKLPVYGTEVTLALVR-------SKLSETNYKGDLRALPEDGTTIPI------GP 128 Query: 159 IEAIPILQQHGRISS 173 + + H + + Sbjct: 129 FQVEGVPVTHSIMDA 143 >gi|256848488|ref|ZP_05553930.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256714755|gb|EEU29734.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 269 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 54/166 (32%), Gaps = 29/166 (17%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++ +++D G + M + + ++A+ TH H+DH HG+ L ++ + Sbjct: 26 AHHRILIDAGLSGKQIEARMAAINRSLKDVEAIFVTHEHSDHSHGVG-----VLARRYGL 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 D+YA + + P+ +I V G ++ Sbjct: 81 DIYANRGTWQAMDNKIGKV----------PLDQKHLIAPGSVK-----DFGDLQVESFAV 125 Query: 167 QHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H ++ TD +++ D +++ Sbjct: 126 SHDAAEPQFYQVHHDNKAFCILTDTGYVSERVAGTIRDADAYLMEC 171 >gi|302333221|gb|ADL23414.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 207 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESEKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIVD-----RFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSTEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|161350067|ref|NP_336961.2| ribonuclease Z [Mycobacterium tuberculosis CDC1551] gi|323719004|gb|EGB28153.1| hypothetical protein TMMG_01699 [Mycobacterium tuberculosis CDC1551A] Length = 241 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 35/193 (18%) Query: 76 IDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAPDCMKHLF-------ESFR 123 + AVL TH H+DHI + + + P+ + P + + Sbjct: 15 LSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIG 74 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---- 179 Y D T PP PI + G I P + ++GFR Sbjct: 75 YRIAHHADLTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHR-PVTPTIGFRIESDGA 130 Query: 180 NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS------------HFSLSESLKK 226 +V D P +SL++L D L+ ++ + + H S+ E+ Sbjct: 131 SVVLAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAAT 188 Query: 227 IELINPKNAILTH 239 ++TH Sbjct: 189 ANRAGVGTLVMTH 201 >gi|91784546|ref|YP_559752.1| hydroxyacylglutathione hydrolase [Burkholderia xenovorans LB400] gi|91688500|gb|ABE31700.1| Hydroxyacylglutathione hydrolase [Burkholderia xenovorans LB400] Length = 263 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++ V+VD G +Q L ++ + A+L TH H DH+ G+ L + + V Sbjct: 21 SDGHSAVVVDPGEAAPVQAYLAKRGWRLSAILLTHHHQDHVGGVADLL-----NGQAVPV 75 Query: 109 YAAP-DCMKHLFES 121 Y + ++HL Sbjct: 76 YGPAGEAIEHLTHR 89 >gi|319647004|ref|ZP_08001230.1| YflN protein [Bacillus sp. BT1B_CT2] gi|317390828|gb|EFV71629.1| YflN protein [Bacillus sp. BT1B_CT2] Length = 264 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 44 ISRVSERGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + + + S V++D G R + ++ TH H DH+ ++ L Sbjct: 33 VYFIFDPDSREAVLIDAGMPKSAPFILREAKERFGDFRLKGIVLTHGHFDHVGALESLL- 91 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 + P+ VYA M +L Y ++ Sbjct: 92 ----ETWPVPVYAHEKEMPYLTGKADYPPAKPQVKSG 124 >gi|229086349|ref|ZP_04218526.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] gi|228696961|gb|EEL49769.1| Zn-dependent hydrolase [Bacillus cereus Rock3-44] Length = 556 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N + H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----EVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|215261105|pdb|2ZDD|A Chain A, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261106|pdb|2ZDD|B Chain B, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261107|pdb|2ZDD|C Chain C, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261108|pdb|2ZDD|D Chain D, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311942|pdb|3IE0|A Chain A, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311943|pdb|3IE0|B Chain B, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311944|pdb|3IE0|C Chain C, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311945|pdb|3IE0|D Chain D, Crystal Structure Of S378y Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|46200035|ref|YP_005702.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Thermus thermophilus HB27] gi|46197663|gb|AAS82075.1| cleavage and polyadenylation specificity factor, 100 kDa subunit [Thermus thermophilus HB27] Length = 431 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATALLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|307721807|ref|YP_003892947.1| RNAse Z [Sulfurimonas autotrophica DSM 16294] gi|306979900|gb|ADN09935.1| RNAse Z [Sulfurimonas autotrophica DSM 16294] Length = 316 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 62/202 (30%), Gaps = 38/202 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG S G PT +N ++L + N + D G Sbjct: 1 MKLTFLGT--SAG-----------KPTKERNV---TALALEF---DQDNKWYLFDCGEAT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGY--FLKQKRPIDVYAAPDCMKHLFE 120 Q+L+ V + + TH H DH +G+ GL K P+ +Y + Sbjct: 42 QHQILKTSLSVGKLCTIFITHLHGDHYYGLPGLLSSKTLDKAFSPLTIYGPKG-----IK 96 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 F C + I IE N + + + H + S + Sbjct: 97 RFIECVIDTSKEHLGYKLEIIEIEAN-----TELSFDKFSLQVLPLVHS-VESFAYFIKE 150 Query: 181 VAYCTDVNAFPAESLEKLQNLD 202 D+ E +L+ L+ Sbjct: 151 ----HDITNKLDEKKLRLEGLE 168 >gi|256847727|ref|ZP_05553172.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256715416|gb|EEU30392.1| beta-lactamase domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 614 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L E I + TH H DHI G+ F Q Sbjct: 36 VIIDCGVLFPEDELLGVDYVIQNYDYLVENKDKIKGIFITHGHEDHIGGLP-----FFLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K +YA P M + ++ + + + + Sbjct: 91 KVNAPIYAGPFAMSLIKGKLEEKHLLRDAELHEVDEFDTVHFKKLWVSFFRTTHSIPDTL 150 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNL 201 + + G I G F+F T V PA + +++ L Sbjct: 151 GVAVHTPQGTIVQTGDFKFD----LTPVGNLPAPNFQQMAKL 188 >gi|90410237|ref|ZP_01218254.1| hypothetical protein P3TCK_05701 [Photobacterium profundum 3TCK] gi|90329590|gb|EAS45847.1| hypothetical protein P3TCK_05701 [Photobacterium profundum 3TCK] Length = 263 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 35/112 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LGCG + T +S+ +++ N T+++D GP Sbjct: 1 MQLNMLGCGDAY-----------------DTNHTNASMLVTQ-----GNFTLLIDCGPTV 38 Query: 65 YMQVLREQVL------------SIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 Q +V +IDA+ TH H DH G+ L + Q R Sbjct: 39 -PQAFFAKVKATKVDHSGIDENTIDAIYLTHAHPDHCLGLTTLVNWMKAQGR 89 >gi|302791347|ref|XP_002977440.1| hypothetical protein SELMODRAFT_107166 [Selaginella moellendorffii] gi|300154810|gb|EFJ21444.1| hypothetical protein SELMODRAFT_107166 [Selaginella moellendorffii] Length = 835 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 34/139 (24%) Query: 53 NTTVIVDTGPDFYMQVLREQV--------------LSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F V I+AV+ TH H DHI + + Sbjct: 56 DRYIMIDAGLMFPD-YEDFGVVKVLPDTTFISRWKHKIEAVIITHGHEDHIGAL----PW 110 Query: 99 FLKQKRP-IDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + P +Y+ ++ + Y F P + + Sbjct: 111 VIPALDPQTRIYSTSFTLELIKRRLKDYNF-------------PFEHRCHTFTMRNPFQA 157 Query: 157 GVIEAIPILQQHGRISSLG 175 G + I H G Sbjct: 158 GPFKVEAIRVTHSIPDCCG 176 >gi|326779781|ref|ZP_08239046.1| cobalbumin biosynthesis protein [Streptomyces cf. griseus XylebKG-1] gi|326660114|gb|EGE44960.1| cobalbumin biosynthesis protein [Streptomyces cf. griseus XylebKG-1] Length = 400 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR + AC R + + +++D P Sbjct: 1 MELTLLGTGAPDGLPRPSCPCAACASARGPWAR--------AATALLVDDALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R + ++ VL THPH Sbjct: 53 VFAAARAGRSLGAVRQVLLTHPH 75 >gi|163735520|ref|ZP_02142952.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter litoralis Och 149] gi|161391140|gb|EDQ15477.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter litoralis Och 149] Length = 297 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 104/316 (32%), Gaps = 82/316 (25%) Query: 9 ILGCGASLGVPRITGDWGACDPTN----PKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG A G+P+ C+ P ++SS+ ++ E + PD Sbjct: 7 ILGAAAGGGLPQWNCGCDNCNLARTGEIPAQ--SQSSVAVTADGENWAILN----ASPDI 60 Query: 65 YMQV----------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 Q+ LRE L + +VL T+ DH+ G+ L++ +P ++A Sbjct: 61 RHQMADCAALHPSGLRE--LPLRSVLVTNGDIDHVAGL-----LTLREMQPFSLFATAGI 113 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-EAIPILQQHGRIS- 172 L ++ F AL+ R E + + A G+I P+ G++ Sbjct: 114 HDVLAQNP--MFDALNSRVVA-------RETIALDAAFELAPGLIATLFPVP---GKVPL 161 Query: 173 ---------------SLGFRFGNVA----YCTDVNAFPAESLEKLQNLDFLIIDAL---- 209 ++G + + + Y + +L+ D+L D Sbjct: 162 YLEGETVQTDLIGDQTVGVKLESASKTAFYIPGCAMLNDDLRARLEGADWLFFDGTLWQD 221 Query: 210 ----------KNGLHSSHFSL---SESLKKIELINPKNAILTHMHVDLDY-----DMVLK 251 K G H S+ S+ E + I HM+ K Sbjct: 222 DEMVRANLGQKTGKRMGHMSMSGPDGSIAAFEGLTIGKKIFVHMNNTNPVLRPTSAEKAK 281 Query: 252 STPSRVVPAFDGMQFS 267 + + + DGM+ + Sbjct: 282 AEAAGWIIGQDGMEIT 297 >gi|317126116|ref|YP_004100228.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] gi|315590204|gb|ADU49501.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum DSM 43043] Length = 565 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 44/197 (22%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ +DA+L TH H DHI G+ Y L+++ I + + + + + Sbjct: 73 IRDRLDQVDAILLTHGHEDHIGGV----PYLLRERPDIPLVGSRLTLAFIEAKLK----- 123 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC---- 184 + P+ +E + + G + I H L A Sbjct: 124 ------EHRIKPVTVEVRE---DHRRKFGPFDCEFIAVNHSIPDGLAVAIRTAAGLVLHT 174 Query: 185 TDVN--AFPAE-------SLEKL--QNLDFLIIDALKNGLHSSHFSLSE-----SLKKIE 228 D FP + + +L + +D ++D+ + F++SE +++ + Sbjct: 175 GDFKMDQFPLDGRVTDLRAFARLGQEGVDLFLVDSTNAEVPG--FTISEGELAPAIETVF 232 Query: 229 LINPKNAIL----THMH 241 P I+ +H+H Sbjct: 233 RTTPGRVIVSSFASHVH 249 >gi|284053167|ref|ZP_06383377.1| beta-lactamase-like protein [Arthrospira platensis str. Paraca] Length = 227 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 67/184 (36%), Gaps = 31/184 (16%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V R N I D G + L +Q+ +V ++H H DHI G +F+ Sbjct: 54 SCVEMRLGNQRFIFDGGTGLRVLGLDLLKQMPVEASVFFSHTHWDHIQGF----PFFVPA 109 Query: 103 KRPI---DVYAA-PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 PI +Y A + E D +P P+ + +D+ G V Sbjct: 110 FIPINRFHIYGAIAPDGSTIKERLS------DQMVHPNFPVPMHVMQSDLKFYDLIPGDV 163 Query: 159 IE------AIPILQQHGRISSLGFRF---GNVA-YCTDV----NAFPAESLEKLQNLDFL 204 I H + ++G+R G A YC+D + F L ++ D L Sbjct: 164 ITLSDGIKIETAPLNHPNM-AVGYRVTWEGRTAVYCSDTEHFLDRFDNNVLHLARDADLL 222 Query: 205 IIDA 208 I DA Sbjct: 223 IYDA 226 >gi|289192548|ref|YP_003458489.1| hypothetical protein MFS40622_1073 [Methanocaldococcus sp. FS406-22] gi|288938998|gb|ADC69753.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22] Length = 273 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 SL I G ++ DT F M++L SID ++ +H H DH G+ Sbjct: 32 SLLIE-AEFNGIKRRILFDTASYAEPILFNMKLLNINPKSIDMIILSHNHFDHTGGLF-- 88 Query: 96 RGYFLKQKRPIDVYAAPD 113 G + + I ++A P+ Sbjct: 89 -GIIKEINKEIPIFAHPN 105 >gi|15924535|ref|NP_372069.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927125|ref|NP_374658.1| hypothetical protein SA1375 [Staphylococcus aureus subsp. aureus N315] gi|49483794|ref|YP_041018.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|57651938|ref|YP_186442.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87159893|ref|YP_494200.1| hypothetical protein SAUSA300_1505 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195352|ref|YP_500156.1| hypothetical protein SAOUHSC_01644 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268029|ref|YP_001246972.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150394097|ref|YP_001316772.1| beta-lactamase domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|151221661|ref|YP_001332483.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156979863|ref|YP_001442122.1| hypothetical protein SAHV_1532 [Staphylococcus aureus subsp. aureus Mu3] gi|161509774|ref|YP_001575433.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140035|ref|ZP_03564528.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314916|ref|ZP_04838129.1| hypothetical protein SauraC_01825 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732198|ref|ZP_04866363.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733205|ref|ZP_04867370.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus TCH130] gi|255006331|ref|ZP_05144932.2| hypothetical protein SauraM_07680 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425670|ref|ZP_05602094.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428331|ref|ZP_05604729.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430968|ref|ZP_05607348.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 68-397] gi|257433656|ref|ZP_05610014.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus E1410] gi|257436570|ref|ZP_05612614.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus M876] gi|257793621|ref|ZP_05642600.1| metallo-beta-lactamase [Staphylococcus aureus A9781] gi|258411079|ref|ZP_05681359.1| metallo-beta-lactamase [Staphylococcus aureus A9763] gi|258420117|ref|ZP_05683072.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|258437377|ref|ZP_05689361.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|258443583|ref|ZP_05691922.1| metallo-beta-lactamase [Staphylococcus aureus A8115] gi|258446790|ref|ZP_05694944.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6300] gi|258448704|ref|ZP_05696816.1| metallo-beta-lactamase [Staphylococcus aureus A6224] gi|258450626|ref|ZP_05698688.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|258453521|ref|ZP_05701499.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|262051207|ref|ZP_06023431.1| hypothetical protein SA930_1638 [Staphylococcus aureus 930918-3] gi|269203173|ref|YP_003282442.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|282893046|ref|ZP_06301280.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8117] gi|282904127|ref|ZP_06312015.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus C160] gi|282905954|ref|ZP_06313809.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908864|ref|ZP_06316682.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911183|ref|ZP_06318985.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914352|ref|ZP_06322138.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M899] gi|282919321|ref|ZP_06327056.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C427] gi|282920094|ref|ZP_06327819.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9765] gi|282924646|ref|ZP_06332314.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C101] gi|282928178|ref|ZP_06335783.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A10102] gi|283958309|ref|ZP_06375760.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|284024604|ref|ZP_06379002.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus 132] gi|293503426|ref|ZP_06667273.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510443|ref|ZP_06669149.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus M809] gi|293530983|ref|ZP_06671665.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M1015] gi|294848576|ref|ZP_06789322.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9754] gi|295406668|ref|ZP_06816473.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8819] gi|295428123|ref|ZP_06820755.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275098|ref|ZP_06857605.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus MR1] gi|297245750|ref|ZP_06929615.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8796] gi|297590911|ref|ZP_06949549.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|304380866|ref|ZP_07363526.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13701343|dbj|BAB42637.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247316|dbj|BAB57707.1| similar to metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Mu50] gi|49241923|emb|CAG40617.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MRSA252] gi|57286124|gb|AAW38218.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus COL] gi|87125867|gb|ABD20381.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202910|gb|ABD30720.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741098|gb|ABQ49396.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149946549|gb|ABR52485.1| beta-lactamase domain protein [Staphylococcus aureus subsp. aureus JH1] gi|150374461|dbj|BAF67721.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156721998|dbj|BAF78415.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368583|gb|ABX29554.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723987|gb|EES92716.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728745|gb|EES97474.1| hydroxyacylglutathione hydrolase [Staphylococcus aureus subsp. aureus TCH130] gi|257271364|gb|EEV03510.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275172|gb|EEV06659.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 65-1322] gi|257278398|gb|EEV09034.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus 68-397] gi|257281749|gb|EEV11886.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus E1410] gi|257283921|gb|EEV14044.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus M876] gi|257787593|gb|EEV25933.1| metallo-beta-lactamase [Staphylococcus aureus A9781] gi|257840229|gb|EEV64693.1| metallo-beta-lactamase [Staphylococcus aureus A9763] gi|257843828|gb|EEV68222.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257848582|gb|EEV72570.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9299] gi|257850989|gb|EEV74932.1| metallo-beta-lactamase [Staphylococcus aureus A8115] gi|257854365|gb|EEV77314.1| beta-lactamase domain-containing protein [Staphylococcus aureus A6300] gi|257857982|gb|EEV80871.1| metallo-beta-lactamase [Staphylococcus aureus A6224] gi|257861784|gb|EEV84583.1| metallo-beta-lactamase [Staphylococcus aureus A5948] gi|257864252|gb|EEV87002.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A5937] gi|259160844|gb|EEW45864.1| hypothetical protein SA930_1638 [Staphylococcus aureus 930918-3] gi|262075463|gb|ACY11436.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus ED98] gi|269941035|emb|CBI49419.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus TW20] gi|282313481|gb|EFB43876.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C101] gi|282317131|gb|EFB47505.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus C427] gi|282321533|gb|EFB51858.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M899] gi|282324878|gb|EFB55188.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282327128|gb|EFB57423.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331246|gb|EFB60760.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282589985|gb|EFB95067.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A10102] gi|282594442|gb|EFB99427.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9765] gi|282595745|gb|EFC00709.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus C160] gi|282764364|gb|EFC04490.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8117] gi|283470823|emb|CAQ50034.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ST398] gi|283790458|gb|EFC29275.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|285817227|gb|ADC37714.1| Hydroxyacylglutathione hydrolase [Staphylococcus aureus 04-02981] gi|290920251|gb|EFD97317.1| metallo-beta-lactamase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095092|gb|EFE25357.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466807|gb|EFF09327.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus M809] gi|294824602|gb|EFG41025.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A9754] gi|294968415|gb|EFG44439.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8819] gi|295128481|gb|EFG58115.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297177401|gb|EFH36653.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus A8796] gi|297575797|gb|EFH94513.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus MN8] gi|298694827|gb|ADI98049.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ED133] gi|302751377|gb|ADL65554.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340593|gb|EFM06527.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437987|gb|ADQ77058.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH60] gi|312829934|emb|CBX34776.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129823|gb|EFT85813.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS03] gi|315195447|gb|EFU25834.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS00] gi|315198760|gb|EFU29088.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus CGS01] gi|320140570|gb|EFW32424.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320144107|gb|EFW35876.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|323440443|gb|EGA98155.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O11] gi|323443217|gb|EGB00835.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus O46] gi|329314222|gb|AEB88635.1| Beta-lactamase domain protein [Staphylococcus aureus subsp. aureus T0131] gi|329727371|gb|EGG63827.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21172] gi|329728473|gb|EGG64910.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329730841|gb|EGG67219.1| metallo-beta-lactamase domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 207 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESEKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIVD-----RFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSTEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|319946148|ref|ZP_08020391.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319747677|gb|EFV99927.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 553 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTVELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ N + G H SLG GN+ Y Sbjct: 105 SNDS-VKKFNDFHVIDANS-----EIDFGGTVVSFFQTTHSIPESLGIVIKTPEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|240141823|ref|YP_002966331.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] gi|240011765|gb|ACS42990.1| Beta-lactamase family protein [Methylobacterium extorquens AM1] Length = 528 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 32/140 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++VD G + L++ + + AV+ TH H DHI G+ L Y Sbjct: 62 TGRWLLVDAGAGMPPKGVAGLQVVVPDPAALKQMLGRLVAVVVTHAHYDHIGGLPALAPY 121 Query: 99 FLKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 K + VYA + + + + +D RT+ P N + Sbjct: 122 LPKGTK---VYATKFAAECVRSQLERYHLDEHVDIRTFSPNSNLTL-------------- 164 Query: 157 GVIEAIPILQQHGRISSLGF 176 PI H +L F Sbjct: 165 KSFTLTPIRVAHSSPEALAF 184 >gi|126649564|ref|ZP_01721805.1| Zn-dependent hydrolase [Bacillus sp. B14905] gi|126593889|gb|EAZ87812.1| Zn-dependent hydrolase [Bacillus sp. B14905] Length = 556 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ +++D G F + L E + A++ TH H DHI GI Sbjct: 29 ADDMILIDCGAKFPDETLLGIDLIIPDITYLLENKEKVKALIVTHGHEDHIGGIP----- 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L +K + VYA + + L + + I I + G Sbjct: 84 YLLKKLNVPVYATRFTLGLIELK-------LKEHKLLRESDLIEIHADSA-----LHLGE 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG GNV + D Sbjct: 132 IDVSFFRTNHSIPDCLGIVLATPEGNVVHTGDFK 165 >gi|150390866|ref|YP_001320915.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950728|gb|ABR49256.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 430 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 50/174 (28%), Gaps = 29/174 (16%) Query: 21 ITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVL 80 I G T RTR L I + + + + + RE IDA+L Sbjct: 25 IGGSC-----TEVFTERTRIILDIGQELPNIDDEKLKKPSSFPRVKGLYREDDKKIDAIL 79 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-ALDDRTYPPIVN 139 +H H DHI G+ I ++ ++ F I N Sbjct: 80 ISHGHGDHI-GLLE------YVDTDIPIFIGEKALE--------IFNVTAQFTGGKSIAN 124 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNA 189 P+ N + G P L H + GF + Y D Sbjct: 125 PV----NYFKSGQEMTIGDFSITPYLVDHSGFDAYGFVIKADGKCIVYTGDFRD 174 >gi|330808995|ref|YP_004353457.1| hypothetical protein PSEBR_a2181 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377103|gb|AEA68453.1| conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 281 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 30/163 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ----VLRE------QVLSIDAVLYTHPHADH 88 +S+ I+ RG T+++D G + Q +L Q ID +L TH H DH Sbjct: 53 PASIHINCYLVRGRGRTILIDAGAGGFNQWGGELLANLALAGVQPGEIDTILLTHAHPDH 112 Query: 89 IHGIDGLRGYF-------LKQKRPIDVYAAPDCM--KHLFESFRYCFKALDDRTYPPIVN 139 I G+ G + +R + + + + F Y + Sbjct: 113 IGGLLNAVGEMAFTNAELVVHQRELAFWEDDGHLGQASERARGNFLFARRVFERYRQNLR 172 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 P I A+P+ + G+RF + A Sbjct: 173 ---------PFTANDVLPGISAMPLPGH--TVGHCGYRFESAA 204 >gi|227504846|ref|ZP_03934895.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] gi|227198537|gb|EEI78585.1| possible metal-dependent hydrolase [Corynebacterium striatum ATCC 6940] Length = 584 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 25/143 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + E G + ++ D GP + +++ + A++ TH H DHI I + Sbjct: 50 CGVLFPSSGEPGVDL-ILPDFGP------IEKKIHKVKALVVTHAHEDHIGAI----PWL 98 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + A+ + + K + R P V E +DV G Sbjct: 99 LKLRPDIPIVASRFTIALIAA------KCKEHRQKPKFVEVN--EKSDVNY------GSF 144 Query: 160 EAIPILQQHGRISSLGFRFGNVA 182 H +LG G A Sbjct: 145 RCRFWAVNHSVPDALGIMLGTPA 167 >gi|182439129|ref|YP_001826848.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467645|dbj|BAG22165.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 400 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR + AC R + + +++D P Sbjct: 1 MELTLLGTGAPDGLPRPSCPCAACASARGPWAR--------AATALLVDDALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R + ++ VL THPH Sbjct: 53 VFAAARAGRSLGAVRQVLLTHPH 75 >gi|169351421|ref|ZP_02868359.1| hypothetical protein CLOSPI_02201 [Clostridium spiroforme DSM 1552] gi|169291643|gb|EDS73776.1| hypothetical protein CLOSPI_02201 [Clostridium spiroforme DSM 1552] Length = 249 Score = 49.4 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 43/167 (25%) Query: 51 GSNTTVIVDTGPDFYMQVL------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++D G Q+L +I+ VL TH H DH + Sbjct: 19 DEGIGILIDCGIS-RKQLLYKLNNLGFNENNINYVLLTHDHYDH--------------NK 63 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I+++ C YC K + +++ E +P+ Sbjct: 64 NINIFDNKIC---------YCGKGCIKD---------IDTAHELTPYKSFNLAHYEIMPL 105 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 H S L + ++ Y TD ++ + + NLD+ II+ Sbjct: 106 SISHDATSPLAYVIKGKKESILYMTDTGYVSQKNRQYINNLDYYIIE 152 >gi|322387145|ref|ZP_08060755.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] gi|321141674|gb|EFX37169.1| metallo-beta-lactamase superfamily protein [Streptococcus infantis ATCC 700779] Length = 553 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 40/127 (31%), Gaps = 20/127 (15%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 M+ L E I V TH HAD I + L + V+ + ++ Sbjct: 52 MEYLFENSDRIAGVFLTHGHADAIGALPYLLSEV-----KVPVFGSELTIELAK-----L 101 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 F +D + VI+ N + G E H SLG G++ Sbjct: 102 FVKGNDSA-KKFDDFHVIDEN-----TEIDFGGTEVSFFRTTHSIPESLGVVLKTSEGSI 155 Query: 182 AYCTDVN 188 Y D Sbjct: 156 VYTGDFK 162 >gi|312973471|ref|ZP_07787643.1| ribonuclease Z [Escherichia coli 1827-70] gi|310332066|gb|EFP99301.1| ribonuclease Z [Escherichia coli 1827-70] gi|323161604|gb|EFZ47489.1| ribonuclease Z [Escherichia coli E128010] gi|323171951|gb|EFZ57595.1| ribonuclease Z [Escherichia coli LT-68] gi|323973026|gb|EGB68220.1| ribonuclease BN [Escherichia coli TA007] Length = 294 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 78/270 (28%), Gaps = 69/270 (25%) Query: 37 RTR--SSLKISRVSERGSNTTVIVDTGPDFYMQVL--REQVLSIDAVLYTHPHADHIHGI 92 RTR +++ ++ S + D G Q+L +D + +H H DH+ G+ Sbjct: 4 RTRNVTAILLNLQHPTQSGL-WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGL 62 Query: 93 DGLRGYFLKQK--RPIDVYAAP------DCM------------------------KHLFE 120 GL +P+ +Y + L + Sbjct: 63 PGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRK 122 Query: 121 SFRYCFKAL--------DDRTYPPIVNPIVIENNDVP----ICMKSAGGVIEAIPILQQH 168 Y + ++ P +N ++ VP AG I Q + Sbjct: 123 VTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQIN 182 Query: 169 G----RISSLG---FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHS 215 G G FG+ C +L+ + +D ++ +A Sbjct: 183 GADYLAAPVPGKALAIFGDTGPC-------DAALDLAKGVDVMVHEATLDITMEAKANSR 235 Query: 216 SHFSLSESLKKIELINPKNAILTHMHVDLD 245 H S ++ I+TH+ D Sbjct: 236 GHSSTRQAATLAREAGVGKLIITHVSSRYD 265 >gi|289522713|ref|ZP_06439567.1| putative mRNA 3-end processing factor [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504549|gb|EFD25713.1| putative mRNA 3-end processing factor [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 416 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 45/164 (27%), Gaps = 29/164 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTG--PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGI 92 RS+L + + +VD G +L E +D ++ TH H DH Sbjct: 14 RSALLVE------GKSCFLVDYGVKKTVGEGILGELPLKNFPELDFIVVTHAHQDHTA-- 65 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVP-- 149 + +++ + +YA P + + R PP + E + Sbjct: 66 --MLPLLVEKGINVPIYATPPTKEFTITYCESWHKNYEIHRLVPPYDKQSIYELEKLFVT 123 Query: 150 ---ICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 AG H + Y D Sbjct: 124 KPYFQEFEAGKGTLITFFPSGH-------LVGSAIVYIKDEKTI 160 >gi|94152400|ref|YP_581807.1| metal-dependent hydrolase [Cupriavidus metallidurans CH34] gi|93358770|gb|ABF12857.1| Metal-dependent hydrolases of the beta-lactamase superfamily III AtsH [Cupriavidus metallidurans CH34] Length = 414 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 94/329 (28%), Gaps = 114/329 (34%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G P W CD SS + + +VD G Sbjct: 64 RLVLLGT---AGGPVW---WPNCDREGI------SSALVV------GDAVYVVDCGDGVG 105 Query: 66 MQVLREQVLS------------IDAVLYTHPHADHIHGIDGLRGYFLKQK-----RPIDV 108 + + + + + TH H+DH L + +P+ V Sbjct: 106 KRYKQAGLGQNNLVSGMSGMENLRGIFLTHLHSDHTVDYFNLFLFGWYNGLTGVKQPVHV 165 Query: 109 YAAP---------------------------------DCMKHLFESFR----YCFKALDD 131 Y D +L+++F + Sbjct: 166 YGPGPRGQLEPIFTPPGQPPRKEPALVNPENPTPGTVDMTNYLYQAFAVDINDRLRDAGR 225 Query: 132 RTYPPIVNPIVIENNDVP--------------ICMKSAGGVIEAIPILQQHGRI-SSLGF 176 + ++ I+ +P + + L H I + + Sbjct: 226 QDLRDLIKVHDIKLPHIPGFKSPNETPEPEMAPFVVHEDDRVRVSATLVNHFPIWPAYAY 285 Query: 177 RF----GNVAYCTDVNAFPAESLEKL-QNLDFLI--------IDALKNGL---------- 213 RF G+V + D P+++L +L ++ D L+ +DAL Sbjct: 286 RFDTDDGSVVFSGDTC--PSKNLIRLAKDADVLVHEVIDVAWVDALFPPPVTAKEEAFKN 343 Query: 214 H--SSHFSLSESLKKIELINPKNAILTHM 240 H SSH S+ + K E K +L+H+ Sbjct: 344 HLLSSHTSIDDVGKVAEAAGAKTLVLSHI 372 >gi|323340638|ref|ZP_08080890.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] gi|323091761|gb|EFZ34381.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] Length = 558 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F Q L I A++ TH H DHI GI +L Q Sbjct: 36 IVVDAGIKFPEDDLLGIDYVIPNYQYLVANQQKIKALVITHGHEDHIGGIP-----YLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPICMKSAGGVI 159 + + +YA P + + L++ I + S Sbjct: 91 QVNVPIYAGPLALALIK-------SKLEEHGLLKTTELHEINEDTVLRFRKTSVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP I G I G ++F Sbjct: 144 HSIPDTLGAAIKTPSGTIVCTGDYKFD 170 >gi|172039432|ref|YP_001805933.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142] gi|171700886|gb|ACB53867.1| hypothetical protein cce_4519 [Cyanothece sp. ATCC 51142] Length = 557 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 17/171 (9%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +++D G +L + +DAV +H H+DH G+ L + + +YA+ Sbjct: 41 RLLLDCGLRDLTPLLNQNQPPVDAVFCSHAHSDHARGLKAL----HETFPTLPIYASHVT 96 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L ++ + E D G + + R Sbjct: 97 KQLLPLNWPEKNSPKTANFCQGLFWEKPFELFDDLTVQLFRAGHLPGAACILLTYRTVE- 155 Query: 175 GFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIID---ALKNGLHS 215 R + Y D + S+E L+ L D LII+ H Sbjct: 156 --RVYKLLYTGDFSLSNLQLVEGLSIEALRGLSPDILIIEGTYGTMRHPHR 204 >gi|145593472|ref|YP_001157769.1| ribonuclease Z [Salinispora tropica CNB-440] gi|145302809|gb|ABP53391.1| RNAse Z [Salinispora tropica CNB-440] Length = 307 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 79/289 (27%), Gaps = 78/289 (26%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG + P T N R + ++ D G Sbjct: 3 ELVVLGT--ASQTP---------TRTRNHNG----------YVLRWDDEVILFDPGEGSQ 41 Query: 66 MQVLREQVLSID--AVLYTHPHADHIHGIDGLR---------------------GYFLKQ 102 Q+L V + D + TH H DH G+ G YF + Sbjct: 42 RQLLYSTVTATDLTRICVTHFHGDHCLGLPGTIQRLSLDRVPHPVAVHFPAGGTDYFNRL 101 Query: 103 KR-------------PIDV----------YAAPDCMKHLFESFRYCFKALDDRT-YPPIV 138 + PID ++H E++ Y D P + Sbjct: 102 RHASSFHETAELDVAPIDADGQQVAIRGGTLEARRLRHPVETYGYRLIEPDGHRMLPERL 161 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL 198 + I + ++ + + ++ G RF A+ D Sbjct: 162 SAHGIAGPAIGELLRVGHLDVAGHRVTREQVSAPRPGQRF---AFVMDT-GLCDAVYALA 217 Query: 199 QNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMH 241 N D L+I+A S+ H + ++ + + +LTH Sbjct: 218 DNADLLVIEATFLASESALAAEVGHLTAGQAAQVATECGVRRLVLTHFS 266 >gi|313498742|gb|ADR60108.1| Metallo-beta-lactamase family protein [Pseudomonas putida BIRD-1] Length = 455 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 38/121 (31%), Gaps = 40/121 (33%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S +SR +T V+VD G Sbjct: 1 MQLTFLGGTGTVTG----------------------SKFLLSR-----DSTRVLVDCGLF 33 Query: 62 ---PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + Q L + ++DAV+ TH H DH +++ +YA P Sbjct: 34 QGFKQLRLRNWQPLPPALRALDAVVLTHAHLDHSG----YLPVLVREGYRGPIYATPATC 89 Query: 116 K 116 Sbjct: 90 A 90 >gi|153955532|ref|YP_001396297.1| hypothetical protein CKL_2915 [Clostridium kluyveri DSM 555] gi|219855928|ref|YP_002473050.1| hypothetical protein CKR_2585 [Clostridium kluyveri NBRC 12016] gi|146348390|gb|EDK34926.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219569652|dbj|BAH07636.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 832 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 69/226 (30%), Gaps = 69/226 (30%) Query: 53 NTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI---------- 92 N +++D G PDF ++EQ IDA++ +H H DHI + Sbjct: 27 NRNILMDCGIRQSSSKDALPDFKS--IQEQ-GGIDAIIISHSHMDHIGSLPIISKEYPLA 83 Query: 93 ---------DGLRGYFL-------KQKRPIDVYAAPDCMKHLFESFR--YCFKALDDRTY 134 D +R ++ I +YA D L F Y Sbjct: 84 RIYATKMTKDLMRVLLYDSLKIMNNREGEIPLYAESDVKNMLNSIFPINYM--------- 134 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 V + ++ + M + + G + Y D + F ++ Sbjct: 135 ---VEFPIFQDVKLTFYMAGHIAGAACVYVTTPEGSLF----------YSGDFSVFSQKT 181 Query: 195 LEKLQ----NLDFLIIDALKNGLHSSHFSLSES--LKKIELINPKN 234 +E L+ D I +A S+ + E + I K Sbjct: 182 VEGLKVPRLRPDVAIFEATYGDRLHSNREVEEERLIDIINECKRKK 227 >gi|323487198|ref|ZP_08092501.1| hypothetical protein HMPREF9474_04252 [Clostridium symbiosum WAL-14163] gi|323399424|gb|EGA91819.1| hypothetical protein HMPREF9474_04252 [Clostridium symbiosum WAL-14163] Length = 281 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 66/226 (29%) Query: 40 SSLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG--- 91 S+ +S +T V++DTG P + +V I+ ++ THP DHI G Sbjct: 53 CSILLS------GDTCVVIDTGEEEDAPHILELLKDNKVEKINCLILTHPDKDHIGGASY 106 Query: 92 IDGLRGYF-------------------LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + +++ I V + M F Y LD R Sbjct: 107 LLDQIPVVQVLAPYFEGEKPLYQELLARLEEKRIPV----ETMPRDRL-FTY--GDLDIR 159 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 +PP ++ND + +L +HG I Y D Sbjct: 160 VFPP-EKFHYNKSNDYS------------LAVLVKHGDIHLF--------YAGDAE---K 195 Query: 193 ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 E L +L LD ID K H + ++ IE + P+ A++T Sbjct: 196 ERLGELLKLDLPAIDVYKTAHHG--RNSKRGVELIEALKPEYAVVT 239 >gi|319651059|ref|ZP_08005193.1| YycJ protein [Bacillus sp. 2_A_57_CT2] gi|317397229|gb|EFV77933.1| YycJ protein [Bacillus sp. 2_A_57_CT2] Length = 264 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 63/224 (28%), Gaps = 55/224 (24%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +VD G Q + + + +L TH H+DHI G+ L +K + Sbjct: 22 EEHSFLVDAGLSGKQMEGLFQHIGRDIGKLSGILVTHEHSDHIKGVG-----ILARKYNL 76 Query: 107 DVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +YA M L I V + + G ++ Sbjct: 77 PIYANEKTWLAMDGL------------------IGQVPVDQKFHFDMETVKTFGSLDIES 118 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H + + F + TD + N + + ++ L+ G Sbjct: 119 FGVSHDAADPMFYVFHHNGKKLVLITDTGYVSDRMKGLISNAEAYVFESNHDVQMLRMGR 178 Query: 214 HS-----------SHFSLSESLKKIELINPKNA---ILTHMHVD 243 + H S ++ + + L H+ D Sbjct: 179 YPWNIKRRILSDVGHVSNEDAALAMSEVAGDRTKSFYLAHLSQD 222 >gi|312872779|ref|ZP_07732844.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2062A-h1] gi|325912252|ref|ZP_08174649.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 143-D] gi|311091821|gb|EFQ50200.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2062A-h1] gi|325475911|gb|EGC79080.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 143-D] Length = 265 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 18 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 74 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 127 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 128 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 184 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 185 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQSLVKKS 233 >gi|270261448|ref|ZP_06189721.1| beta-lactamase domain protein [Serratia odorifera 4Rx13] gi|270044932|gb|EFA18023.1| beta-lactamase domain protein [Serratia odorifera 4Rx13] Length = 276 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 10/69 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD--------FYMQVLREQVL--SIDAVLYTHPHADH 88 SS+ I+ RG T+++D G + V ID +L TH H DH Sbjct: 48 PSSIHINCYLVRGPGRTILIDAGAGGFKQWGGKLKANLALAGVRPCDIDTILLTHAHPDH 107 Query: 89 IHGIDGLRG 97 I G+ G Sbjct: 108 IGGLVESSG 116 >gi|218960612|ref|YP_001740387.1| metallo-beta-lactamase family protein [Candidatus Cloacamonas acidaminovorans] gi|167729269|emb|CAO80180.1| metallo-beta-lactamase family protein [Candidatus Cloacamonas acidaminovorans] Length = 261 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 53/222 (23%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 NT +++D G + + I+ +L +H H+DHI G+ + +K I Sbjct: 21 ENTALLLDAGISMHRIMECLESYHIESAKINGILVSHEHSDHIKGVGAIS-----RKLKI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + E + + IV+ N + G I P + Sbjct: 76 PVYINRPTLSSCAERLGD------------VQDRIVLFNTGNSFTI----GDIIIEPFVS 119 Query: 167 QHGRISSLGFRF-------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H S F F + TD+ L KL + LI+++ L G Sbjct: 120 THDAAESCNFVFYPVSEPKRKLGVATDLGYPTQLCLLKLSGVSTLILESNHDEKMLMEGP 179 Query: 214 HS-----------SHFSLSESLKKIE-LINP--KNAILTHMH 241 + H S +++ I LI+P KN IL H+ Sbjct: 180 YDWKLKQRIRSVQGHLSNVQAVGLISTLIHPGLKNLILAHLS 221 >gi|148926801|ref|ZP_01810480.1| hypothetical protein Cj8486_1759c [Campylobacter jejuni subsp. jejuni CG8486] gi|145844526|gb|EDK21633.1| hypothetical protein Cj8486_1759c [Campylobacter jejuni subsp. jejuni CG8486] Length = 664 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I ++ TH H DHI + YF K+ + +YA P + + F + + Sbjct: 172 DKICGIVITHAHEDHIGAV----PYFFKEFQ-FPIYATPLALGMISNKFEEHGLKAERKW 226 Query: 134 YPPIVNPIVIENNDVP---ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + P+ V E + I + + A+ I + G I G F+ Y TD Sbjct: 227 FRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTD 286 >gi|51246600|ref|YP_066484.1| hypothetical protein DP2748 [Desulfotalea psychrophila LSv54] gi|50877637|emb|CAG37477.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 276 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 63/261 (24%) Query: 54 TTVIVDTGPDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++DTG + L + + A++ +H H DH GI + L+Q + +++Y Sbjct: 33 GNLLLDTGNKLAFVANAEALGVNLQEVSALVLSHGHYDHTGGIADI----LQQNKDVEIY 88 Query: 110 AAPDC------------------MKHLFESFRYCFKALDDRTYP-----------PIVNP 140 + + + + ++ T P PI Sbjct: 89 LHAGVFQPRYSLHGEDASIVKMPLAAMQAVMHHADEKVNWLTQPVSLQDRVGLTGPIPRE 148 Query: 141 IVIENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG----FRFGNVAYCTDVNAF 190 E+ + AG VI+ I G + LG + Y D + Sbjct: 149 CSFEDTGGSFYLDPAGKVIDTIEDDNALWFHGPEGLVICLGCCHAGIINTLNYIMDYSGE 208 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSSHFS---LSESLKKIELINPKNAILTHMHVDLDYD 247 + +D +I GLH H L+++ + + ++ K + H D Sbjct: 209 --------RKIDTVI-----GGLHLLHADESRLTKTAEALNGLDLKRIVACHCSGDEAVQ 255 Query: 248 MVLKSTPSRVVPAFDGMQFSS 268 + VV + GMQF+ Sbjct: 256 YLADHLSCEVVAGYAGMQFNI 276 >gi|309807782|ref|ZP_07701714.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 01V1-a] gi|312874739|ref|ZP_07734758.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2053A-b] gi|308168884|gb|EFO70970.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 01V1-a] gi|311089484|gb|EFQ47909.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2053A-b] Length = 265 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 18 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 74 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 127 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 128 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 184 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 185 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQSLVKKS 233 >gi|75909752|ref|YP_324048.1| hypothetical protein Ava_3546 [Anabaena variabilis ATCC 29413] gi|75703477|gb|ABA23153.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 299 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 71/211 (33%), Gaps = 35/211 (16%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +I D G Q L++ + + + +T+ ++ I G F+ Sbjct: 61 AGKRLIFDGGTGLRILGKAWQHLQQPLEA--HLFFTNSQSNRIQGFPFFAPAFIA-GNCF 117 Query: 107 DVYAAPDC-----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + L + YP V ++ + + + Sbjct: 118 HIYGGAASNGASIKQSLCDQM-----LQPHFPYPLQVMQSELQFYHLTPDSELKLDDVTI 172 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVN-----AFPAESLEKLQNLDFLIIDALKNG 212 L + S+G+R +VAY TD+N + L+ +Q++D LI +A Sbjct: 173 RTALINQTQ-RSIGYRVTWQEYSVAYVTDLNMSAEQGEREQVLQIIQDVDLLIANAT-YT 230 Query: 213 LHSSHFS------LSESLKKIELINPKNAIL 237 +SH +++ + + I+ Sbjct: 231 PPTSHEHESAELLWQAAVEMAQKAGVRKLII 261 >gi|315426519|dbj|BAJ48150.1| ribonuclease Z [Candidatus Caldiarchaeum subterraneum] Length = 301 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 38/180 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G+P RR S+ I S + +++D G Sbjct: 1 MRVVFLGT--SGGMPT--------------RRRGMPSVAIRM-----SKSILLMDCGEGT 39 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDCMKHLF 119 Q + + + TH H DH+ G+ GL + L +++Y + + Sbjct: 40 QRQFIFSGLGVKPGFHIFLTHLHGDHVLGVPGLL-FTLSMNGREKEVNIYGPKNTATLVK 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 Y +N I +++ + H +SLG+ Sbjct: 99 AL---------TLPYLGTLN-FTINIHELSPTDTVHIDTVTVTAFKTDH-TTNSLGYIVK 147 >gi|251781266|ref|ZP_04824182.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243081713|gb|EES47774.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 267 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 76/265 (28%), Gaps = 67/265 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 T+LG G+++ V + + N ++D G Sbjct: 3 SITMLGTGSAM-VTKCYNTC---------------------FTLSKDNEYFLIDAGGGNT 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHG------------IDGLRGYFLKQKRPIDVY 109 + + + I + +H H DH+ G ++ +Y Sbjct: 41 ILSNLEKANIKINKIHNMFISHNHNDHVLGSVWVIRAVANGMLNDKYDGIFN------IY 94 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 ++ + Y + + + + +I N + G Sbjct: 95 CTKKSIEAIKTICSYVLQ----NKFLKLFDDKIIFNEIQNNTEVNILGRRTIF-FDIHST 149 Query: 170 RISSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLH 214 + GF+ + + D + + +++D+L +A H Sbjct: 150 KELQFGFKTFLSNGKTLTFLGD-EPYREIVKDFCEDVDYLFHEAFCLYSQKEIFKPYEKH 208 Query: 215 SSHFSLSESLKKIELINPKNAILTH 239 H ++ ++ +++ KN IL H Sbjct: 209 --HATVKDACNNAKILAAKNIILYH 231 >gi|313212287|emb|CBY36288.1| unnamed protein product [Oikopleura dioica] Length = 344 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 38/127 (29%), Gaps = 33/127 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D T LG AS PR R + +VD Sbjct: 1 MSD-LQVTCLGT-ASQQ-PRALNSCV----------------------YRNKGISYLVDC 35 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAP 112 G Q+ V SI VL TH H DH G+ K+ I+VY Sbjct: 36 GEGTQAQLTASGVRPSSIKTVLITHLHGDHCFGLPDTGSLLEAVKKVKYEYPTIEVYGPV 95 Query: 113 DCMKHLF 119 ++L Sbjct: 96 GLRRYLR 102 >gi|153807672|ref|ZP_01960340.1| hypothetical protein BACCAC_01954 [Bacteroides caccae ATCC 43185] gi|149130034|gb|EDM21246.1| hypothetical protein BACCAC_01954 [Bacteroides caccae ATCC 43185] Length = 312 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPEGLEELF 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + V E + + + IP+ RI GF F Sbjct: 101 APMLAFFCKTLTYK-----VLFHEFETKEPALIYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|30021887|ref|NP_833518.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] gi|29897443|gb|AAP10719.1| Zn-dependent hydrolase [Bacillus cereus ATCC 14579] Length = 556 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N + H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSN-----LTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|313681243|ref|YP_004058981.1| RNA-metabolising metallo-beta-lactamase [Sulfuricurvum kujiense DSM 16994] gi|313154103|gb|ADR32781.1| RNA-metabolising metallo-beta-lactamase [Sulfuricurvum kujiense DSM 16994] Length = 694 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 26/160 (16%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +I+D G F + LRE I AV+ TH H DHI G+ Y Sbjct: 168 ENEAIIIDIGMSFPDEEMHGVDILVPDFTYLREIRKKIVAVIITHAHEDHIGGV----PY 223 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE-NNDVPI---CMKS 154 F K+ + +Y P + + F R + PIV I + ND I M Sbjct: 224 FFKEMQ-FPIYGTPLPLAMIGNKFDEHHMRDFRRYFNPIVKRIPYKIGNDFEIEWMHMTH 282 Query: 155 AGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 + ++ I + G I G F+ + Y D++ Sbjct: 283 SIIDSSSLAITTKAGTIIHTGDFKIDHTPVDGYTADLHRL 322 >gi|294786541|ref|ZP_06751795.1| metallo-beta-lactamase family protein [Parascardovia denticolens F0305] gi|315226119|ref|ZP_07867907.1| metallo-beta-lactamase [Parascardovia denticolens DSM 10105] gi|294485374|gb|EFG33008.1| metallo-beta-lactamase family protein [Parascardovia denticolens F0305] gi|315120251|gb|EFT83383.1| metallo-beta-lactamase [Parascardovia denticolens DSM 10105] Length = 617 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 57/169 (33%), Gaps = 24/169 (14%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +R ++ ++A++ TH H DHI G+ Y L Sbjct: 89 LLIDCGVLFPEEEQPGVDLILPDF--SYIRPRLDKVEALVLTHGHEDHIGGV----PYLL 142 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +++ I + + + + R V N I + + Sbjct: 143 RERPDIPLIGSKLTLAFVEAKCREHHIDPIMHPVSGRDKMKVGPFNLEFITVTHSIPDAL 202 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIID 207 A+ + G + G + D +L Q +D L+ D Sbjct: 203 AVSVKTPAGHLIDTGDMKLDQLPL-DHKITDLREFARLGEQGVDLLMAD 250 >gi|261884390|ref|ZP_06008429.1| YycJ [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 124 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 10/74 (13%) Query: 50 RGSNTTVIVDTGPDFY---MQ--VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +VD G Q + + + + TH H+DHI G+ + +K Sbjct: 13 ENDQNAFLVDVGLSARKMEQQFTAIGRDLKKLSGIFITHEHSDHIKGLGAVA-----RKY 67 Query: 105 PIDVYAAPDCMKHL 118 + +YA + + Sbjct: 68 GVPIYANRKTWEAM 81 >gi|291444095|ref|ZP_06583485.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces roseosporus NRRL 15998] gi|291347042|gb|EFE73946.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces roseosporus NRRL 15998] Length = 226 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 6/81 (7%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR + C R ++L I G F Sbjct: 1 MELTLLGTGAPDGLPRPSCPCAVCASARGPWARAATALLIDDALLLDLTP------GAMF 54 Query: 65 YMQVLREQVLSIDAVLYTHPH 85 + ++ VL THPH Sbjct: 55 AAARAGHSLGAVRQVLLTHPH 75 >gi|322386213|ref|ZP_08059846.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] gi|321269793|gb|EFX52720.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] Length = 560 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + AVL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKAVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I + ++ I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELTFKNLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|312375001|gb|EFR22454.1| hypothetical protein AND_15244 [Anopheles darlingi] Length = 772 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDFY-MQV----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++D G D QV +++ V +IDAVL ++P H+ + L G K Sbjct: 26 DDVRFLLDCGWDEKFDQVFIKEIKKYVHTIDAVLLSYPDGSHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F + IV + + MK G Sbjct: 83 PIYATIPVYK-MGQMFMYDMFMSHYNMHDFDLFSLDDVDAAFDKIVQLKYNQSVAMKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N LEKLQ LI Sbjct: 142 YGITITPLPAGHLVGGTIWKI-VKVGEEDIVYATDFNHKKERHLNGCELEKLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|82751148|ref|YP_416889.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] gi|82656679|emb|CAI81106.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus RF122] Length = 207 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESEKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIVD-----RFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSTEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|60680507|ref|YP_210651.1| ribonuclease Z [Bacteroides fragilis NCTC 9343] gi|76363373|sp|Q5LGN7|RNZ_BACFN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|60491941|emb|CAH06701.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 304 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 97/320 (30%), Gaps = 93/320 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----RDKLFMIDCGE 40 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R + ++ + +H H DH G+ GL F R + +++ + L Sbjct: 41 GAQMQLRKSRLKFSRLNHIFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L + V + + + + IP+ RI GF F Sbjct: 101 TPMLNFFCHTLAYK-----VIFHEFDTRQTSVVYEDRSMTVTTIPLQH---RIPCCGFLF 152 Query: 179 GNVA-----------------------------------------------------YCT 185 A YC+ Sbjct: 153 AEKARPNHIIRDMVDFYKVPVYELNRIKNGSDYVTPEGEVIANTRLTRPSDPPRKYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D F E +++L +D L +A L + H + +++ + + ++ H Sbjct: 213 DTI-FRPEIVKQLSGVDLLFHEATFAESELARAKETYHTTAAQAARIALEAGVRQLVIGH 271 Query: 240 MHVDLDYDMVLKSTPSRVVP 259 + + +L S V P Sbjct: 272 FSARYEDESILLKEASAVFP 291 >gi|328952536|ref|YP_004369870.1| Ribocuclease J [Desulfobacca acetoxidans DSM 11109] gi|328452860|gb|AEB08689.1| Ribocuclease J [Desulfobacca acetoxidans DSM 11109] Length = 566 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 19/115 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE+ I A++ TH H DHI + + LK+ + VY P + L E Sbjct: 65 PDF--SYLRERRDKIAALILTHGHEDHIGAV----PFLLKELN-LPVYGTPLTLALLREK 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 L + +I+ + G I H + +GF Sbjct: 118 -------LKEHHLLEQSELHLIDPRRQLVV-----GPFVFNFIPVTHSIVDGVGF 160 >gi|307330996|ref|ZP_07610127.1| ribonuclease Z [Streptomyces violaceusniger Tu 4113] gi|306883382|gb|EFN14437.1| ribonuclease Z [Streptomyces violaceusniger Tu 4113] Length = 306 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 30/94 (31%), Gaps = 24/94 (25%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSAR-ELIVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQV--LSIDAVLYTHPHADHIHGI 92 G Q+LR V ID + TH H DH G+ Sbjct: 39 GEGTQRQMLRAGVAAHDIDRICVTHFHGDHSLGL 72 >gi|257053759|ref|YP_003131592.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] gi|256692522|gb|ACV12859.1| beta-lactamase domain protein [Halorhabdus utahensis DSM 12940] Length = 641 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 65/203 (32%), Gaps = 51/203 (25%) Query: 1 MKD--YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M D + T LGC C R+S +S T V++ Sbjct: 176 MSDDEWVRITTLGC---------------CREVG------RASFILSTP-----ETRVLI 209 Query: 59 DTGPDF-------YMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 D G Y+Q L SIDAV+ TH H DH L K + Sbjct: 210 DAGDKPGAEDEYPYLQVPEALGVGASSIDAVVLTHAHLDHSA----LIPLLFKYGYDGPI 265 Query: 109 YAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ- 166 Y + + Y A + PP + +V E I ++ G V + P ++ Sbjct: 266 YTTEPTRDLMGLLTLDYLDVAAKEGRAPPYDSEMVREAIKHTIPIE-YGDVTDISPDIKL 324 Query: 167 -QHGRISSLG-----FRFGNVAY 183 H LG F G+ Y Sbjct: 325 TMHNAGHILGSAISHFHIGDGLY 347 >gi|154282451|ref|XP_001542021.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410201|gb|EDN05589.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1131 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 100/321 (31%), Gaps = 96/321 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 611 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 650 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ L++ + + + +H HADH G Sbjct: 651 GQLQRTFAPDELQDVLRDLKVIWISHLHADHHLGTVSVIRAWHKVTHGTQSRTAPPPEQE 710 Query: 92 ------IDGLRGYFLKQKRPID---VYAAPDCMK-----------HLFESFRYCFKALDD 131 I+ R + + + ++ Y++ + + +SF Y D Sbjct: 711 CDLTKLINEKRLFVVSNAKMLEWLAEYSSVEDYGFDNLLLLAADPTVPDSFHYNHLGSDG 770 Query: 132 RT-----YPPIVNPIVIENNDVPICMKS--AGGVIEAIPILQQHGRIS-SLGFRFG---N 180 + P+ + + P+ ++ A G+ + + H + S + F F Sbjct: 771 QPILDDRGKPLTTFLSFNPDRSPLALQLQQATGLSTLLTVPVMHCQGSMATSFVFPSGLK 830 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLII--------DALKNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ ++ D ++ D L++ H + E+L+ + + Sbjct: 831 VSYSGDCR--PSRDFARV-GADSTVLIHEATFEDDMLQDAQAKRHSTCGEALRVAKQMRA 887 Query: 233 KNAILTHMHVDLDYDMVLKST 253 +N ILTH + + Sbjct: 888 RNVILTHFSQRYTHKPTIPRL 908 >gi|29832574|ref|NP_827208.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces avermitilis MA-4680] gi|29609694|dbj|BAC73743.1| putative adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces avermitilis MA-4680] Length = 439 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 T+LG GA G+PR AC + R ++L + + TV++D P Sbjct: 41 ELTLLGTGAPAGLPRPDCPCAACATALGEAARAATALLV--------DGTVLLDLTPGAA 92 Query: 64 FYMQVLREQVLSIDAVLYTHPH 85 F + + VL +HPH Sbjct: 93 FAAARAGRSLGGVRQVLLSHPH 114 >gi|150390812|ref|YP_001320861.1| beta-lactamase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149950674|gb|ABR49202.1| beta-lactamase domain protein [Alkaliphilus metalliredigens QYMF] Length = 293 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 13/80 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ S++ ++++D G Q + R++V ID ++ THPHADHI G+ + Sbjct: 48 SILITTPSQQ----SILIDGGDPTQGQRVVSYLKRKKVKKIDVLIATHPHADHIGGLSAV 103 Query: 96 RGYFLKQKRPIDVYAAPDCM 115 F K +Y P Sbjct: 104 MDSFEINK----LYLPPVTH 119 >gi|325262317|ref|ZP_08129054.1| putative metallo-beta-lactamase domain protein [Clostridium sp. D5] gi|324032149|gb|EGB93427.1| putative metallo-beta-lactamase domain protein [Clostridium sp. D5] Length = 266 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 79/262 (30%), Gaps = 59/262 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G + V + + +VD G Sbjct: 1 MKLTILGTGNAT-VTECYNTC---------------------FALSEDHRHFLVDAGGGN 38 Query: 65 YMQVLRE------QVLSIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAP 112 Q+LR + I + TH H DH+ G+ G + K + + +Y Sbjct: 39 --QILRILKDTQIPLEEIHDIFITHEHIDHLLGLFWLIRMIGQKMNQGKYEGDVRIYCHS 96 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + + + I +E+ D K E + Sbjct: 97 GLISTITTIAELTIMKKVTQHIGGRIQLIPLESGD-----KKQILDCEVTFFDIGSTKAK 151 Query: 173 SLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHSSH 217 GF ++ C D P E+ E +++ D+L+ +A H H Sbjct: 152 QFGFSLNTRDGKKLSCCGDEPYNPCEA-EYVRDSDWLMHEAFCLYSEADKFKPYEKH--H 208 Query: 218 FSLSESLKKIELINPKNAILTH 239 ++ E+ + E + N IL H Sbjct: 209 STVREACELAEELKASNLILYH 230 >gi|160938395|ref|ZP_02085750.1| hypothetical protein CLOBOL_03293 [Clostridium bolteae ATCC BAA-613] gi|158438768|gb|EDP16525.1| hypothetical protein CLOBOL_03293 [Clostridium bolteae ATCC BAA-613] Length = 335 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 30/218 (13%) Query: 50 RGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++D G + + + V +D V+ THPH+DHI G+D + + Sbjct: 15 ESDGHYMLIDAGENDQAGTVISYLKAQGVTKLDYVIGTHPHSDHIGGLDKVID-TFPVDK 73 Query: 105 PI--DVYAA----PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 I V D + + K +Y I + +K G Sbjct: 74 VILPPVEHTTKTFEDVLDSIASRGLKITKPTPGDSYDLGDASFTILS-----PVKDYGSD 128 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + + G + G + C D E + ++N L D LK G H S Sbjct: 129 LNNWSV----GVRLTYGD--NSFVMCGDAENQAEE--DIIKNGAVLKADVLKAGHHGSST 180 Query: 219 SLSESLKKIELINPKNAIL---THMHVDLDYDMVLKST 253 S S++ ++ ++P ++ + ++ Sbjct: 181 STSDA--FLKKVSPSWVVIQCGKGNSYGHPHKETMEKL 216 >gi|148655032|ref|YP_001275237.1| beta-lactamase domain-containing protein [Roseiflexus sp. RS-1] gi|148567142|gb|ABQ89287.1| beta-lactamase domain protein [Roseiflexus sp. RS-1] Length = 561 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 71/240 (29%), Gaps = 56/240 (23%) Query: 36 RRTRSSLKISRVSERGSNTTVI--------VDTGPDFYM-------------QVLREQVL 74 R R+ + + E G N V+ +D G F LR+Q Sbjct: 4 NRLRA-IPLGGAGEVGRNMWVLEQNDEILVLDCGVMFPEADMLGVDLVLPDITYLRDQKD 62 Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 I A++ TH H DHI + Y + + +Y P + L L + Sbjct: 63 KIKAIVLTHGHEDHIGAV----PYLVPELDFPPIYGTPLTLGMLA-------GKLKEHRL 111 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA----YCTD--VN 188 + ++ + G P H ++G Y TD + Sbjct: 112 LDRARLVKMQAGE-----SFTVGSFTIEPFSVAHSIPDTVGLAIDTPVGLAIYLTDWKFD 166 Query: 189 AFP----AESLEKL-----QNLDFLIIDALKNGL---HSSHFSLSESLKKIELINPKNAI 236 P L KL ++ LI D ++ S + E+ I P I Sbjct: 167 HTPVDGRPTDLVKLSELGRRSPLLLITDCVRVESKGYTPSEQVVGEAFDSIFATAPGRII 226 >gi|254519346|ref|ZP_05131402.1| metallo-beta-lactamase [Clostridium sp. 7_2_43FAA] gi|226913095|gb|EEH98296.1| metallo-beta-lactamase [Clostridium sp. 7_2_43FAA] Length = 294 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 77/216 (35%), Gaps = 46/216 (21%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGI------DGLRGY 98 R ++ ++VD GP Q+ + + + V+ THPH DHI G+ + + Sbjct: 60 RVNDFDILVDAGPRSDADKLMKQLEEKNIDDFEIVIATHPHEDHIGGMVKVFEKYDVESF 119 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 Y H ++F A+ V + G Sbjct: 120 ----------YMPKVT--HTTKTFENMINAVSKEGLKAKV------IKEGTSFDLGNGAK 161 Query: 159 IEAI-PILQQH----GRISSLGFRFGNVAYCTDVNAFPAESLEKL----QNLDFLIIDAL 209 IE PI + + + FGN +Y +A E + +NLD D L Sbjct: 162 IEVYSPIYESYEEFNDYSPIMKLTFGNTSYMFTGDAEAHAEQEVVAKYPKNLD---ADVL 218 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD 245 K G H S S S + + +E ++P+ + + +D Sbjct: 219 KFGHHGS--STSSTKEFVEAVSPEYGV---ISCGVD 249 >gi|322391620|ref|ZP_08065089.1| ribonuclease Z [Streptococcus peroris ATCC 700780] gi|321145703|gb|EFX41095.1| ribonuclease Z [Streptococcus peroris ATCC 700780] Length = 309 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SSL + + E N + D G Sbjct: 1 MDIQFLGTGAGQ----------------PSKARNVSSLALKLLDE--INEVWLFDCGEGT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLK-QKRPIDVYAAP----DC 114 ++L + + + TH H DHI G+ G R + ++ +++Y Sbjct: 43 QNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPRGIKSFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + P ++ + + + +++ + A + I + Sbjct: 103 LTSLR---------VSGSRLPYKIHFHEFDQDSLGKILETDKFTVYAEELDH---TIFCV 150 Query: 175 GFRF 178 G+R Sbjct: 151 GYRV 154 >gi|307106517|gb|EFN54762.1| hypothetical protein CHLNCDRAFT_35723 [Chlorella variabilis] Length = 814 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 30/137 (21%) Query: 53 NTTVIVDTG---PDFYM----------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + ++VD G PDF L + I+AV+ TH H DHI + + Sbjct: 116 DRYILVDAGLMFPDFTDLGMQKILPDTSFLAQWRDKIEAVVITHGHEDHIGAL----PWV 171 Query: 100 LKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 P +YA M+ + + + R + + + G Sbjct: 172 WPALDPSTPIYAGAFPMQLIKRRLQEFNLYDEGRC------------HVISMRQNFQLGP 219 Query: 159 IEAIPILQQHGRISSLG 175 + PI H G Sbjct: 220 FDCTPIRVTHSIPDCCG 236 >gi|297566424|ref|YP_003685396.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] gi|296850873|gb|ADH63888.1| RNA-metabolising metallo-beta-lactamase [Meiothermus silvanus DSM 9946] Length = 578 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 24/193 (12%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF---ES 121 + L E I + TH H DHI + + + Q + VY A + + E Sbjct: 83 RIDYLLEHQELIKGWVLTHGHEDHIGAL----PFIMPQLPRVPVYGAKLTLGLVKGKLEE 138 Query: 122 FR-----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F + FK + I V++ + + G+I PI G+I G Sbjct: 139 FGLRAGDFNFKEVSPDERIQIGRFFVVDLFRMTHSIPDNSGMIIHTPI----GKIVHTGD 194 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 F+ + + + + LI D A + G+ S +++ L I Sbjct: 195 FKLDPTPIDGKTSHLAKIAQAGAEGVLLLIADSTNAERPGITPSESEIAKGLDAIIGKAK 254 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 255 GRIFVTTFASHIH 267 >gi|213420721|ref|ZP_03353787.1| hypothetical protein Salmonentericaenterica_24452 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 166 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 5/75 (6%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 59 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 118 Query: 107 DVYAAPDCMKHLFES 121 VY P S Sbjct: 119 QVYGPPGTQAMTKAS 133 >gi|14520974|ref|NP_126449.1| hypothetical protein PAB0518 [Pyrococcus abyssi GE5] gi|5458191|emb|CAB49680.1| Beta lactamase-like protein [Pyrococcus abyssi GE5] Length = 272 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 13/77 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S + + V+VDTG D + + ID + TH H DH G+ Sbjct: 29 SALVE-----SNGYKVLVDTGTDGKVLLNNMHELGIDANDIDVLFITHGHYDHTGGLKE- 82 Query: 96 RGYFLKQKRPIDVYAAP 112 + ++ PI+VYA P Sbjct: 83 --FLKERSEPIEVYAHP 97 >gi|154175541|ref|YP_001407359.1| hypothetical protein CCV52592_1115 [Campylobacter curvus 525.92] gi|112802440|gb|EAT99784.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 573 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 22/161 (13%) Query: 38 TRSSLKI-----SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 T +S I S SE +++ PDF +R+ I V+ TH H DHI + Sbjct: 45 TDTSAIIVDIGMSFPSESMHGVDILI---PDF--DYVRKIKDKIKGVIITHAHEDHIGAV 99 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI--VNPIVIENNDVP- 149 YF K+ + +YA P + + F + + + P +I + +V Sbjct: 100 ----PYFYKEFK-FPIYATPLPLGMINNKFEEHGLKQERSLFRSVEKRKPYIIGDFEVEW 154 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 I + + A+ I + G I G F+ + Y +D Sbjct: 155 IHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYASD 195 >gi|21283226|ref|NP_646314.1| hypothetical protein MW1497 [Staphylococcus aureus subsp. aureus MW2] gi|49486381|ref|YP_043602.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297207736|ref|ZP_06924171.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911817|ref|ZP_07129260.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] gi|21204666|dbj|BAB95362.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49244824|emb|CAG43284.1| metallo-beta-lactamase superfamily protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296887753|gb|EFH26651.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886063|gb|EFK81265.1| metallo-beta-lactamase [Staphylococcus aureus subsp. aureus TCH70] Length = 207 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D + + L + + A+L TH H DHI +D + + + Sbjct: 19 ENDKAVILIDPSGESGKIIKKLNQINKPLKAILLTHAHFDHIGAVDDIVD-----RFDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY L + + P +I + P + IE Sbjct: 74 VYMHEAEFDFLKDPVKNGADKFKQYGLP------IITSKVTPEKLNEGSTEIEGFKFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G + F A D Sbjct: 128 HTPGHSPGSLTYVFDEFAVVGDT 150 >gi|18976392|ref|NP_577749.1| hypothetical protein PF0020 [Pyrococcus furiosus DSM 3638] gi|24212604|sp|P81414|Y020_PYRFU RecName: Full=UPF0173 protein PF0020 gi|2967438|dbj|BAA25165.1| unnamed protein product [Pyrococcus furiosus DSM 3638] gi|18891918|gb|AAL80144.1| hypothetical protein PF0020 [Pyrococcus furiosus DSM 3638] Length = 210 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 45/211 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T +++D PD +++ +D +L TH H DH Y Sbjct: 14 EDRGTKILIDPYPDVDE----DRIGKVDYILVTHEHMDH--------------------Y 49 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + L + Y ++ + + ++ + + G I +H Sbjct: 50 GKTPLIAKLSD----AEVIGPKTVYLMAISDGLTKVREIEVGQEIELGDIRVRAFFTEHP 105 Query: 170 RISS-LGFRFG---NVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESL 224 LG+ VA+ D PA +L+ +D L L S S+ E+ Sbjct: 106 TSQYPLGYLIEGSKRVAHLGDTYYSPA--FTELRGKVDVL----LVPIGGKSTASVREAA 159 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 +E+I P+ A+ + Y ++ P Sbjct: 160 DIVEMIRPRIAV------PMHYGTYSEADPE 184 >gi|114332094|ref|YP_748316.1| cyclic-AMP phosphodiesterase [Nitrosomonas eutropha C91] gi|114309108|gb|ABI60351.1| cyclic-AMP phosphodiesterase [Nitrosomonas eutropha C91] Length = 254 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 21/204 (10%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAA 111 + +++D G L +L ID + TH H DHI I L + RP+ V+A Sbjct: 24 DEDILIDAGTGVGTLTLD-DLLRIDHIFVTHAHLDHIAFIPFLVDTAGSLRDRPLIVHAL 82 Query: 112 PDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P + L + F D + P + V + A G P+ H Sbjct: 83 PSTLACLQ---AHIFNWHIWPDFSCIPDAAHPYMRYEPVTVGEAVALGSRRITPLPACH- 138 Query: 170 RISSLGFRFG----NVAYCTDVNAFPA--ESLEKLQNLDFLII-----DALKNGLHSS-H 217 + ++GF+ ++ + D A A E++ ++ NL +LII DA ++ + H Sbjct: 139 IVPAVGFQLDSGQSSLVFTGDTTADDALWEAINQISNLRYLIIESAFSDAGQDIAARAGH 198 Query: 218 FSLSESLKKIELINP-KNAILTHM 240 F + ++ + +TH+ Sbjct: 199 FHPAMLANELNKLQHNAEIYITHL 222 >gi|237667641|ref|ZP_04527625.1| metallo beta-lactamase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|237655989|gb|EEP53545.1| metallo beta-lactamase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 368 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 77/223 (34%), Gaps = 31/223 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I +E +++D G + L+ + V+ TH H DHI +D Sbjct: 48 SILIQYGNE-----NMLIDAGNNDDENTLKNYINSLGIKEFKYVVGTHAHEDHIGSLD-- 100 Query: 96 RGYFLKQKRPIDVY-----AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 Y + + VY A+ ++L + P V D Sbjct: 101 --YIINSFKVGKVYFPKVSASTKTFENLLN----AVNNKGMKFTIPTVGES-FNLGDAKC 153 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 + G + + L + + + D + + L+ L D LK Sbjct: 154 TILGPNGSTY--TDANNYSIVIKLEYGSNSFLFTGDAEDVSEKEMLS-SGLN-LKSDVLK 209 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 G H S S +E + + +NPK A+L+ + D DY K T Sbjct: 210 AGHHGSKSSTTE--EFLNAVNPKYAVLS-VGKDNDYGHPNKET 249 >gi|253702642|ref|YP_003023831.1| beta-lactamase [Geobacter sp. M21] gi|251777492|gb|ACT20073.1| beta-lactamase domain protein [Geobacter sp. M21] Length = 558 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 44/134 (32%), Gaps = 30/134 (22%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + VIVD G F L E+V I A+L TH H DHI + Y Sbjct: 32 GDDIVIVDCGLMFPEPYMLGIDVVIPDIGYLIERVDRIRAILLTHGHEDHIGAL----PY 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L+ P +Y + + E L + V+ V++ D G Sbjct: 88 VLRDINP-PIYGTALTLGFVKEK-------LKEFELDQKVDLRVVKPRD-----TVQLGS 134 Query: 159 IEAIPILQQHGRIS 172 E I H + Sbjct: 135 FEVEFIRVAHSIVD 148 >gi|160944762|ref|ZP_02091989.1| hypothetical protein FAEPRAM212_02277 [Faecalibacterium prausnitzii M21/2] gi|158443946|gb|EDP20950.1| hypothetical protein FAEPRAM212_02277 [Faecalibacterium prausnitzii M21/2] Length = 312 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 41/185 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG A++ +P + V+E G + ++++D G Sbjct: 2 LTITLLGTAATMPLPE--------------------RALTAAVAECGGH-SLLLDCGEGT 40 Query: 65 YMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAAPDCMKHLFE 120 R V + DA+ TH H DHI G+ GL Q R + + ++ Sbjct: 41 QTAARRAGVNLMRADAICLTHYHGDHIFGLPGLLQTLGAQGRTRSLVLLGPEGLLEVWRA 100 Query: 121 SF------RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + Y K L R P+ + + +P+ +H R+ SL Sbjct: 101 VYALTGPLPYAVKPLVCRAGQPVALDALSDGWPAGA---------TLLPVATKH-RVRSL 150 Query: 175 GFRFG 179 G+R Sbjct: 151 GYRLD 155 >gi|18310481|ref|NP_562415.1| late competence protein [Clostridium perfringens str. 13] gi|18145161|dbj|BAB81205.1| probable late competence protein [Clostridium perfringens str. 13] Length = 291 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 20/193 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D + + +ID + THPH DHI G+D + F + Sbjct: 57 NGINMLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DV 111 Query: 107 DVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIP 163 + AP H +++ KA+ + I I+ D + + S Sbjct: 112 KSFYAPKV-AHTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTDVQVYSPVKSQYEE- 169 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 L + + + + + + D + + E L L D LK G H SH S SE Sbjct: 170 -LNNYSPVMKISYGQNSFMFTGDAESLVEK--EILNENKDLKADVLKLGHHGSHSSTSE- 225 Query: 224 LKKIELINPKNAI 236 + ++ ++P AI Sbjct: 226 -EFLKAVDPSIAI 237 >gi|302529312|ref|ZP_07281654.1| predicted protein [Streptomyces sp. AA4] gi|302438207|gb|EFL10023.1| predicted protein [Streptomyces sp. AA4] Length = 266 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T +VD G Q +R + +++A+ TH HADH+ +FL + VY Sbjct: 81 DGRTYLVDCGRGATTQFVRAGLKFRTLEAIFLTHLHADHVA---DYYNFFL-LGGSVPVY 136 >gi|229002771|ref|ZP_04160673.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] gi|229008525|ref|ZP_04165953.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228752749|gb|EEM02349.1| Zn-dependent hydrolase [Bacillus mycoides Rock1-4] gi|228758486|gb|EEM07631.1| Zn-dependent hydrolase [Bacillus mycoides Rock3-17] Length = 556 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G++ Y Sbjct: 108 LGEAGMLGRVDLKTIDSNSA-----VEFNTTTVSFFGTTHSIPDSVGVCFHTSQGSIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|195133726|ref|XP_002011290.1| GI16080 [Drosophila mojavensis] gi|193907265|gb|EDW06132.1| GI16080 [Drosophila mojavensis] Length = 297 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG + Q VLRE+ +I ++ TH H DH+ G+ + G + Sbjct: 38 GKKRILIDTGDEDVPQYIDHLKGVLREEQATISKIILTHWHHDHVGGVKDIVGNKQLADK 97 Query: 105 PIDVYAAPDCMKH 117 +VY P ++ Sbjct: 98 DCEVYKFPRSLED 110 >gi|229916278|ref|YP_002884924.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229467707|gb|ACQ69479.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 205 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 10/61 (16%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T V++D G P F+ + R ++ AVL TH H DHI GID LR ++ + V Sbjct: 21 DGTVVVIDPGTDDPRFFDTIERFG--TLSAVLLTHAHFDHIGGIDALR-----ERYQVPV 73 Query: 109 Y 109 Y Sbjct: 74 Y 74 >gi|86145609|ref|ZP_01063939.1| hypothetical protein MED222_01607 [Vibrio sp. MED222] gi|85836580|gb|EAQ54706.1| hypothetical protein MED222_01607 [Vibrio sp. MED222] Length = 446 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R S V++D G D + + ++A+L TH H DHI + L Q Sbjct: 20 RDSGQAVLIDCGLFQGEDTRPLDIEFETSHLNALLLTHTHIDHIGRLPWLLASGFNQ--- 76 Query: 106 IDVYAAPDCMK 116 +Y + Sbjct: 77 -PIYCTQATAE 86 >gi|206890602|ref|YP_002249796.1| cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742540|gb|ACI21597.1| cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily [Thermodesulfovibrio yellowstonii DSM 11347] Length = 254 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 72/211 (34%), Gaps = 34/211 (16%) Query: 53 NTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RP 105 N ++ D G F Q I+ + TH H DHI I L + + Sbjct: 24 NNKILFDAGGVTSSLSFTAQ------QKIEHIFITHAHLDHIRDIPFLADNIILSGKSKR 77 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 I++Y+ + + + + ++ D T P V +++ + + Sbjct: 78 INIYSIKEVIDDIKKHL-LNYRLWPDFTVIPDVKNSILDLKIIHEEKSILLDGYKITAYR 136 Query: 166 QQHGRISSLGFRFGN----VAYCTDVNAFPA-ESLEKL--QNLDFLIIDALKNGL----- 213 H + ++GF Y D PA + +K + L+ LII+ Sbjct: 137 MNH-TVPAVGFLVEKEGRSFFYTGDTG--PAINTWKKFLNKKLNALIIEVSLPDKMKDLA 193 Query: 214 ----HSSHFSLSESLKKIELINPKNAILTHM 240 H + L E LK P+ +TH+ Sbjct: 194 TKTGHLTPRLLFEDLKLFNQ-KPEKIFITHI 223 >gi|148980244|ref|ZP_01815952.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrionales bacterium SWAT-3] gi|145961338|gb|EDK26647.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrionales bacterium SWAT-3] Length = 446 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 8/71 (11%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R S +V++D G D + + ++A+L TH H DHI + L Q Sbjct: 20 RDSGQSVLIDCGLFQGSDARPLDIDFETSHLNALLLTHTHIDHIGRLPWLLATGFNQ--- 76 Query: 106 IDVYAAPDCMK 116 +Y + Sbjct: 77 -PIYCTQATAE 86 >gi|302693657|ref|XP_003036507.1| hypothetical protein SCHCODRAFT_102508 [Schizophyllum commune H4-8] gi|300110204|gb|EFJ01605.1| hypothetical protein SCHCODRAFT_102508 [Schizophyllum commune H4-8] Length = 382 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 23/93 (24%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D T LG ++ VP +T R+ SSL + + + D G Sbjct: 4 TDPIVVTFLGTVSA--VPSLT--------------RSNSSLALRLNEDVW-----LFDCG 42 Query: 62 PDFYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 Q+ R +V SI + TH HADHI G+ Sbjct: 43 EATLRQLQRSRVKMGSIRKIFITHLHADHICGL 75 >gi|282862243|ref|ZP_06271306.1| cobalbumin biosynthesis protein [Streptomyces sp. ACTE] gi|282563268|gb|EFB68807.1| cobalbumin biosynthesis protein [Streptomyces sp. ACTE] Length = 400 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR C R + + +++D P Sbjct: 1 MELTLLGTGAPEGLPRPDCPCAVCASARGTGAR--------AATALLVDDALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R V + VL THPH Sbjct: 53 VFAAARAGRSVAGVRQVLLTHPH 75 >gi|258406059|ref|YP_003198801.1| beta-lactamase domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798286|gb|ACV69223.1| beta-lactamase domain protein [Desulfohalobium retbaense DSM 5692] Length = 555 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 33/154 (21%) Query: 52 SNTTVIVDTGPDF-------------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++ V++D G F L E+ + AV+ TH H DHI + + Sbjct: 31 ADSAVLIDCGLMFPDEVHLGVDVVIPRFDFLLEKKHKLKAVVLTHGHEDHIGAL----PW 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK+ + +Y++P + + L + V +E + G Sbjct: 87 LLKEMPEVPLYSSPFTLALVRNK-------LREHDLADTVTLCPMEPRQ-----SAELGD 134 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 H I G G + D Sbjct: 135 FRFHFFPVCHSIIKGYGLGIETPVGRFVHTGDFK 168 >gi|323143054|ref|ZP_08077758.1| metallo-beta-lactamase domain protein [Succinatimonas hippei YIT 12066] gi|322417155|gb|EFY07785.1| metallo-beta-lactamase domain protein [Succinatimonas hippei YIT 12066] Length = 271 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 81/260 (31%), Gaps = 59/260 (22%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 LG G +L + S I R +N +VD G Sbjct: 5 IVFLGTGYAL---ALNC--------------YNSCFVI-----RNNNEYFMVDAGGGN-- 40 Query: 67 QVLRE------QVLSIDAVLYTHPHADHIHG-IDGLRGYFLKQK-----RPIDVYAAPDC 114 Q+L+ + I + TH H DH+ G I +R K K + +++ Sbjct: 41 QILKLLKDTKIDIDKIHDLFVTHTHTDHVLGVIWVMRSILQKMKAGKYEGSLRIFSHEKV 100 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L C L + + ++ +S G +A + Sbjct: 101 LNLLKTI---CTATLPKKLVALMNERVMFNELTDGSDFQSCGMSFKA--FDILSTKEKQY 155 Query: 175 GF--RFGN---VAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHSSHFS 219 GF F + ++Y D F + + D+LI +A H H + Sbjct: 156 GFTALFEDGLKLSYLGD-EPFNEHCESYVTDSDYLITEAFCLYKDRDIYKPYEKH--HST 212 Query: 220 LSESLKKIELINPKNAILTH 239 ++ + + KN IL H Sbjct: 213 AKDAAECASKLRAKNIILFH 232 >gi|296170536|ref|ZP_06852120.1| ribonuclease Z [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894768|gb|EFG74493.1| ribonuclease Z [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 279 Score = 49.0 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 51/189 (26%), Gaps = 39/189 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P R S + + +VD G Sbjct: 2 IEITLLGTGS----PI------------PDPNRAGPSTLVRAGGQ-----VFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDG-----LRGYFLKQKRPIDVYAAP----- 112 + + A+L TH H+DHI + F P+ + P Sbjct: 41 LQRAAAVGVGAAGLTALLITHLHSDHIGDLGDLLITRWISTFAPDPAPLPIIGPPGIAET 100 Query: 113 --DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++ Y D PP V V G I P + Sbjct: 101 VEATLQAFRHDIEYRIAHHADLNAPPAVEVHECTEGAVW---DRDGVSIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG 179 ++GFR Sbjct: 157 TPTVGFRID 165 >gi|184159174|ref|YP_001847513.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter baumannii ACICU] gi|183210768|gb|ACC58166.1| predicted hydrolase (metallo-beta-lactamase superfamily) [Acinetobacter baumannii ACICU] Length = 811 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 41/207 (19%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ + H D D Sbjct: 565 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLS--HLDQ----D 614 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 615 DHSGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 672 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 673 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 726 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 727 LGHHGSKHSS---AYDFLATLKPKLAI 750 >gi|159467781|ref|XP_001692070.1| hypothetical protein CHLREDRAFT_115745 [Chlamydomonas reinhardtii] gi|158278797|gb|EDP04560.1| predicted protein [Chlamydomonas reinhardtii] Length = 415 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 30/138 (21%) Query: 52 SNTTVIVDTG------PDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V++D G D MQ L + I+A++ TH H DHI + + Sbjct: 25 GDRYVVIDAGLMFPDFSDLGMQKILPDTDFLAQWKDRIEALIITHGHEDHIGAL----PW 80 Query: 99 FLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + P +YA+ M+ + + D++ + + + G Sbjct: 81 VVPALDPATPIYASSFVMQLVKRRLT-EYNLWDEKRFIT-----------FDMRQRFQAG 128 Query: 158 VIEAIPILQQHGRISSLG 175 E P+ H G Sbjct: 129 PFEIEPVRVTHSIPDCCG 146 >gi|41614860|ref|NP_963358.1| hypothetical protein NEQ064 [Nanoarchaeum equitans Kin4-M] gi|56749442|sp|Q74MH2|RNZ_NANEQ RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|40068584|gb|AAR38919.1| NEQ064 [Nanoarchaeum equitans Kin4-M] Length = 316 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 34/164 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G P R S+ ++ + ++ D G + Q+ Sbjct: 4 ILGTGG----------------NMPTKYRQTLSIFVNYMG-----KGILFDAGENTQRQM 42 Query: 69 --LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK--RPIDVYAA---PDCMKHLFES 121 L ID + TH H DHI G+ G+ Q R + ++ + ++ + +S Sbjct: 43 RLLNLSPTQIDYIFLTHIHGDHILGLPGILLSLSNQDYNRELTIFGPKGIKEVIEKIIDS 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 F + +P + I D + I +P+L Sbjct: 103 FA------ININFPLKIKEIGETKIDFGPFYIESIYGIHQVPVL 140 >gi|312623509|ref|YP_004025122.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203976|gb|ADQ47303.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 591 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 51/169 (30%), Gaps = 36/169 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVL----------REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R N +++D G + I AVL +H H DH + Sbjct: 241 RFENEILVIDCGSQPREFCIVDIEGFLAQKGYSTNMIKAVLISHAHYDHY-------SFV 293 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 I VYA + + +F R C + N + + G Sbjct: 294 QYLPHQIPVYATKETIDLIFIMNRECLRGKK--------------INFIQYAEEFEIGKF 339 Query: 160 EAIPILQQHGRISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFL 204 + H + S GF FGN + Y D + LE + + L Sbjct: 340 KVSAFPNGH-ILGSAGFDIHFGNRRLIYTGDFSLHSQMILEGMSLQEIL 387 >gi|219668589|ref|YP_002459024.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219538849|gb|ACL20588.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 275 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 21/143 (14%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-------LSIDAVLYTHPHADHI 89 R ++ + E GS V+VDTG + Q + E V A++ TH H DH+ Sbjct: 29 RIVTACLVGIPEEEGSQ-WVLVDTGLENSSQFILESVHSRFGKNSRPQAIILTHGHFDHV 87 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + L Y+ + VYA ++ Y D P V ++ Sbjct: 88 GSVKELAEYW-----DVPVYA--HTLE-----LPYLTGKKDYPLADPGVGGGLVSGISTT 135 Query: 150 ICMKSAGGVIEAIPILQQHGRIS 172 P+ HG + Sbjct: 136 FPHTRIDLGYRIFPLP-DHGEVP 157 >gi|259500802|ref|ZP_05743704.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus iners DSM 13335] gi|309804117|ref|ZP_07698198.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 11V1-d] gi|315654105|ref|ZP_07907021.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|259167496|gb|EEW51991.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus iners DSM 13335] gi|308163885|gb|EFO66151.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 11V1-d] gi|315488801|gb|EFU78447.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] Length = 272 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 25 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 81 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 134 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 135 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 191 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 192 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQLLVKKS 240 >gi|307942134|ref|ZP_07657485.1| ribonuclease J [Roseibium sp. TrichSKD4] gi|307774420|gb|EFO33630.1| ribonuclease J [Roseibium sp. TrichSKD4] Length = 558 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 22/87 (25%) Query: 47 VSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 V G + +IVD G PD L E+V +I ++ TH H DH G Sbjct: 30 VGPEGDRSWLIVDCGVSFAGPDLPGIDVVLPDIR--FLEEEVDNIVGMVITHAHEDHYGG 87 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHL 118 I L + + +Y P L Sbjct: 88 IVHLWP-----QLRVPMYMTPFTAGLL 109 >gi|269792092|ref|YP_003316996.1| beta-lactamase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099727|gb|ACZ18714.1| beta-lactamase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 572 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 30/138 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F + L + I + TH H DHI G+ + Sbjct: 50 GDEMIVIDCGLKFPEEDMLGIDLLIPDVSFLEQNRGKIRGIFITHGHEDHIGGLPYVLP- 108 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 K + VYA + + Y P+ +++ G Sbjct: 109 ----KLDVPVYATRLTIGLIKNKLAEVCP-----RYKPVF-------HEIGAGDTVDLGS 152 Query: 159 IEAIPILQQHGRISSLGF 176 I H +L + Sbjct: 153 FSVRAIAVCHSIPDALAY 170 >gi|91976848|ref|YP_569507.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] gi|91683304|gb|ABE39606.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 320 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 10/72 (13%) Query: 30 PTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVLS------IDAVL 80 P +N R SL GS+ +++D+G + + V I+ V Sbjct: 54 PWREENARGSCSLL-EVEDLDGSHRRLLIDSGWNRDYMRARFAATGVDRLLRTGKIEGVF 112 Query: 81 YTHPHADHIHGI 92 TH H DH+ G+ Sbjct: 113 LTHEHMDHLFGL 124 >gi|330945165|gb|EGH46868.1| pyrroloquinoline quinone biosynthesis protein PqqB [Pseudomonas syringae pv. pisi str. 1704B] Length = 226 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 66/233 (28%), Gaps = 50/233 (21%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 I A++ DH G+ LR Q V+ + L F F+ L + Sbjct: 4 ISAIVLMDSQIDHTTGLLSLREGCPHQ-----VWCTDMVHEDLSTGFP-LFEMLKH--WN 55 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPIL------QQHGRISSLGFRFGNVA------- 182 + IE + P+ H G G + Sbjct: 56 GGLTWNRIELQGSFVIPACPNLRFTPFPLRSAAPPYSPHRFDPHPGDNIGLLVEDTRTGG 115 Query: 183 ---YCTDVNAFPAESLEKLQNLDFLIIDAL-----------------KNGLHSSHFSLSE 222 Y + EK+++ D L++D + H + Sbjct: 116 KLFYAPGLGKVDEALAEKMRDADCLLVDGTMWDDDEMQRRGVGTRTGREMGHLAQNGPGG 175 Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQFSS 268 L+ +E + +L H++ ++ + +P V AFDGM Sbjct: 176 MLEVLEGFPEQRKVLIHINNTNP--ILDEDSPERAELVRRNVEVAFDGMSIEL 226 >gi|225387164|ref|ZP_03756928.1| hypothetical protein CLOSTASPAR_00916 [Clostridium asparagiforme DSM 15981] gi|225046712|gb|EEG56958.1| hypothetical protein CLOSTASPAR_00916 [Clostridium asparagiforme DSM 15981] Length = 251 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 78/235 (33%), Gaps = 54/235 (22%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLR--G 97 ++ + R + +++D G + L+E+ ID + +TH HADHI G+ GL Sbjct: 19 WLTSMMARCGGSNLLIDCGEGTQI-ALKEKGWSPKPIDVICFTHYHADHISGLPGLLLTM 77 Query: 98 YFLKQKRPIDVYAA---PDCMKHLFES-----FRYCFKALDDRTYPPIVNPIVIENNDVP 149 ++ P+ + + L F F L + + P VI+ V Sbjct: 78 GNAERTEPLTLVGPKGLERVVGALRTIAPELPFELRFIELTENRERLQLGPYVIDAYRVN 137 Query: 150 ICMKSAGGVIEAIPI--------------------------LQQHGRISS----LG-FRF 178 + G + + ++ GR+ + LG R Sbjct: 138 HNVICYGYAVSILRTGRFDVDKAREQEIPQRFWSRLQKGEEIEHEGRLLTPDLVLGPDRK 197 Query: 179 G-NVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFSLSESLK 225 G V YCTD P E + D I + + H + E+ + Sbjct: 198 GLKVVYCTDTRPVP-VIAEYAEGADLFICEGMYGEKEKAAKAREYKHMTFYEAAE 251 >gi|119720296|ref|YP_920791.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119525416|gb|ABL78788.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 295 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ +S + GS V+ DTG + + LR + +DAV+ +H H DH G+ L Sbjct: 31 SVYLSLSYDDGSKYRVLFDTGRSGRVLLENASSLRLSLEEVDAVVLSHRHYDHAGGLPAL 90 >gi|84999744|ref|XP_954593.1| hypothetical protein [Theileria annulata] gi|65305591|emb|CAI73916.1| hypothetical protein TA18960 [Theileria annulata] Length = 1049 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 +I+ + + D G + + ++D + TH H DH +G+ Y Sbjct: 510 RITNRRNSFGSKIWLFDCGEGTKNGLENIGLDPLNVDRIFLTHLHGDHCYGVFSFL-YLR 568 Query: 101 KQKRPIDVYAAP 112 +++ P+++Y P Sbjct: 569 ERQNPLEIYGPP 580 >gi|67481311|ref|XP_656005.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] gi|56473177|gb|EAL50620.1| metallo-beta-lactamase family protein [Entamoeba histolytica HM-1:IMSS] Length = 261 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 85/281 (30%), Gaps = 66/281 (23%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG ++G + + L ++D G Sbjct: 2 SLKVRILGCGGNIGF-----------------KNQSTCLMCFCGELNEETKVALIDGGTG 44 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV-----YAAPDCMKHL 118 +++ +++ I V+ TH H DH GI L I V + + ++ L Sbjct: 45 I-IRLKEKEIPMIKDVVLTHAHIDHTCGI-SLLVESFYNDELIQVCKPTLHCSHIVLEQL 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------GVIEAIPILQQHGRIS 172 +D + + +IE + G I + H + Sbjct: 103 -----------NDSIFKKGIWMNLIEKGFMTFQSIEDGEQCVLSNGITITAVKCLHSVL- 150 Query: 173 SLGFRFGN----VAYCTDV-------NAFPAESLEKLQNLDFLIIDAL------KNGLHS 215 +LG+ N A+ D E KL+ + I + + L S Sbjct: 151 TLGYIISNKTSAFAFTGDTTYYEPFWKRISEE--PKLKGV---ICEVSLSNELEERALIS 205 Query: 216 SHFSLSESLKKIELINPK-NAILTHMHVDLDYDMVLKSTPS 255 +H + + I+ + P TH+ Y V++ Sbjct: 206 NHMTPKMLQEGIKHLLPGIKVYATHI-KSYSYYKVIEQLKD 245 >gi|242021798|ref|XP_002431330.1| Cleavage and polyadenylation specificity factor 100 kDa subunit, putative [Pediculus humanus corporis] gi|212516598|gb|EEB18592.1| Cleavage and polyadenylation specificity factor 100 kDa subunit, putative [Pediculus humanus corporis] Length = 731 Score = 49.0 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 66/182 (36%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++D G D YM+ L++ V IDAV+ +HP H+ + L G Sbjct: 26 DEFRFLLDCGWDEKFDQEYMKELKKHVPLIDAVILSHPDPLHLGALPYLVGKCSL---SC 82 Query: 107 DVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F + I+ + I MK G Sbjct: 83 PIYATIPVYK-MGQMFMYDLYQSRYNMEEFDLFTLDDVDAAFDKIIQLKYNQSIAMKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 I P+ H G I + F+ G ++ Y D N LEK+Q LI Sbjct: 142 YGITITPLPAGHMIGGSIWKI-FKVGEEDIIYAVDYNHKKERHLNGCELEKIQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|325300621|ref|YP_004260538.1| beta-lactamase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320174|gb|ADY38065.1| beta-lactamase domain protein [Bacteroides salanitronis DSM 18170] Length = 418 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 60/180 (33%), Gaps = 33/180 (18%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE----QVLSI----DAVLYTHPHADHIHGIDGLRGYFLK 101 + N +++D G + +E V + DA+ YTH H DH+ G+ L Sbjct: 20 KSGNAKILIDLGANLPDSEEKELDASDVARLTNDADAIFYTHYHGDHV-GLFPLVPEN-- 76 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I Y + + +R K D + + +VPI +K G I Sbjct: 77 ----IPQYIGKGAQEVMLCKYRALNKHQDRSKELIAIERFHLYTPNVPIDIK---GQIRV 129 Query: 162 IPILQQHGRISSLGFRF----------GNV---AYCTDVNAFPAESLEKLQNLDFLIIDA 208 P H + F+ G+ Y + N+DFLII+ Sbjct: 130 TPYYVSHSAFDAYMFKIEAEGKTILHTGDFRRHGYLG--KELFKVLCTYINNVDFLIIEG 187 >gi|167758797|ref|ZP_02430924.1| hypothetical protein CLOSCI_01139 [Clostridium scindens ATCC 35704] gi|167663537|gb|EDS07667.1| hypothetical protein CLOSCI_01139 [Clostridium scindens ATCC 35704] Length = 206 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 16/152 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T L + + V+VD P + + ++ + + I+A+L TH H DHI GIDG Sbjct: 13 TNCYLAV----NEETRQAVVVDPAACPSYLLSHIKSEGIKIEALLLTHAHFDHIMGIDGF 68 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F + VY + + + K Y ++ +K A Sbjct: 69 VDEFH-----VPVYVYEEDADAMTD-----PKLNQSSVYTGGYTYEGAKSIKEGQILKLA 118 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 G E R V + D Sbjct: 119 GYDFEVFHTPGHTKGGCCYYVRSEGVLFSGDT 150 >gi|297538678|ref|YP_003674447.1| RNA-metabolising metallo-beta-lactamase [Methylotenera sp. 301] gi|297258025|gb|ADI29870.1| RNA-metabolising metallo-beta-lactamase [Methylotenera sp. 301] Length = 457 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 66/247 (26%), Gaps = 61/247 (24%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S + ++VD G Sbjct: 1 MELTFLGATGTVTG-----------------------SKYLLTCETDNGTRRILVDCGLF 37 Query: 62 ---PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 ++ L +D V+ TH H DH F+K VY Sbjct: 38 QGLKQLRLKNWAALPINPKDVDVVVLTHAHIDHTG----YLPLFVKNGFSGKVYCTEATR 93 Query: 116 K----------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA---------- 155 HL E + P + E+ D + + A Sbjct: 94 DLCDILLPDSAHLQEEEADYANRRGFSKHKPALPLYTKEDADNALELLVAVDFEQTVDLG 153 Query: 156 -GGVIEAIPILQQHGR-ISSLGFRFGNVAYCTDV---NAFPAESLEKLQNLDFLIIDALK 210 G + P G + ++ ++ + D+ N + +L+ D+L++++ Sbjct: 154 DGLTLTFTPNGHILGSAFVRIQYKKTSIVFSGDIGRPNDILMKPPVRLKQADYLVLESTY 213 Query: 211 NGLHSSH 217 H Sbjct: 214 GNRLHEH 220 >gi|294674105|ref|YP_003574721.1| ribonuclease Z [Prevotella ruminicola 23] gi|294474267|gb|ADE83656.1| ribonuclease Z [Prevotella ruminicola 23] Length = 304 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 33/174 (18%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILGCG++L P + R +S ++ V E +++D MQ+ Sbjct: 8 ILGCGSAL--PTL---------------RHNASSQVVEVRE----KVLMLDCAEGTQMQL 46 Query: 69 L--REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 R + + V TH H DH G+ G+ F R + V+A + + L ++ Sbjct: 47 RKCRVRFNKLSHVFITHLHGDHCFGLIGMISTFGLLGRTAKLHVHAPKELGEELDRQLKF 106 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 D Y + P ++ + + +E+IP++ R+ G+ Sbjct: 107 ---YTHDLGYEVVFYP--VDTTQRQVVYEDRSITVESIPLIH---RMPCCGYLI 152 >gi|153854671|ref|ZP_01995921.1| hypothetical protein DORLON_01919 [Dorea longicatena DSM 13814] gi|149752775|gb|EDM62706.1| hypothetical protein DORLON_01919 [Dorea longicatena DSM 13814] Length = 207 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 58/196 (29%), Gaps = 31/196 (15%) Query: 38 TRSSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T L I + TV+VD G P ++EQ L + AVL TH H DHI G+ + Sbjct: 13 TNCYLVI----NEETKDTVMVDPGAYPAKLKNAVKEQGLKLKAVLLTHAHFDHIMGLSDV 68 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + VY + + + Y V + + I A Sbjct: 69 -----MEDIKVPVYVEEADLPMMMDGESNLSSGYMRGGYQFADAVPVRDGQQLQI----A 119 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDV--------NAFPAESLEKLQNL---DFL 204 G I +V + D + FP S L L Sbjct: 120 GFQFRVIHTPGHTPGGCCYYMEQEDVLFSGDTLFRTSVGRSDFPGGSASALVRSVKEKLL 179 Query: 205 IIDALKNGLH--SSHF 218 I L H H Sbjct: 180 I---LPEETHVYPGHM 192 >gi|108758638|ref|YP_629736.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108462518|gb|ABF87703.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 546 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 27/128 (21%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF L++ + VL TH H DH+ + +L Sbjct: 27 LLIDAGLMFPSAGMPGVDIIIPDFSH--LKQNAAQLKGVLLTHGHEDHLGALP-----YL 79 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + P+ VY + + ++ R P+ +E + V + A Sbjct: 80 LNEVPVPVYGTRFTLAMARHRLEELGIEADLREIEPREPFPVGTAFRVEASRVTHTVPDA 139 Query: 156 GGVIEAIP 163 G I P Sbjct: 140 VGYILRTP 147 >gi|76800760|ref|YP_325768.1| mRNA 3'-end processing factor [Natronomonas pharaonis DSM 2160] gi|76556625|emb|CAI48196.1| predicted mRNA 3'-end processing factor [Natronomonas pharaonis DSM 2160] Length = 639 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 45/138 (32%), Gaps = 20/138 (14%) Query: 52 SNTTVIVDTGPDF-------YMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 T V++D G Y+Q L ++DAV+ TH H DH L K Sbjct: 203 PETRVLIDCGDKPGAEGEVPYLQVPEALGAGASNLDAVVLTHAHLDHSA----LIPLLFK 258 Query: 102 QKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + + Y A + PP + V E + C+ G + Sbjct: 259 YGYDGPIYCTEPTRDLMGLLTLDYLDVASKEGRTPPYDSSQVREA--IKHCIPLEYGDVT 316 Query: 161 AIPILQQ---HGRISSLG 175 I + H LG Sbjct: 317 DIAPDLKLTFHNAGHILG 334 >gi|148547684|ref|YP_001267786.1| beta-lactamase domain-containing protein [Pseudomonas putida F1] gi|148511742|gb|ABQ78602.1| beta-lactamase domain protein [Pseudomonas putida F1] Length = 455 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 40/121 (33%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S ++R +T V+VD G Sbjct: 1 MQLTFLGGTGTVTG----------------------SKFLLTR-----DSTRVLVDCGLF 33 Query: 62 ---PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + Q L + ++DAV+ TH H DH +++ +YA P Sbjct: 34 QGFKQLRLRNWQPLPPALRALDAVVLTHAHLDHSG----YLPVLVREGYRGPIYATPATC 89 Query: 116 K 116 Sbjct: 90 A 90 >gi|315222363|ref|ZP_07864268.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315188524|gb|EFU22234.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 560 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + I VL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRIKGVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ ++ I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKNLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|315304300|ref|ZP_07874639.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] gi|313627324|gb|EFR96118.1| metallo-beta-lactamase family protein [Listeria ivanovii FSL F6-596] Length = 205 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 11/109 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R + I VY +P + L + P + Sbjct: 50 AVLLTHCHYDHIGALEEIRKAY-----SIPVYVSPKEQEWLIN--PALNLSAHIAETPIV 102 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 NP E ++ + P H + SL F F + D Sbjct: 103 ANPAEHEFKLGEYNIEGFHFKVVPTP---GHS-VGSLSFIFDDFVIVGD 147 >gi|21227778|ref|NP_633700.1| hypothetical protein MM_1676 [Methanosarcina mazei Go1] gi|20906183|gb|AAM31372.1| conserved protein [Methanosarcina mazei Go1] Length = 602 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + +++D G D V +E + S+D V+ THPH DHI G+D + Sbjct: 70 SILLEYGDND-----MLIDAGDNGKGDDVANYVKKEGITSLDYVVATHPHEDHIGGMDEI 124 Query: 96 RGYF 99 F Sbjct: 125 LNDF 128 >gi|290770035|gb|ADD61800.1| putative protein [uncultured organism] Length = 261 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 31/166 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S+ ++VD G + ID + TH H+DH+ G+ +K I Sbjct: 21 SDGGILVDAGVSCKRLCDALKANEIDPSVIQGIFITHTHSDHVSGLK-----VFTKKYHI 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+A ++ L D P + +++ ++ A G Sbjct: 76 PVFAQRTNLEILAA----------DGKLDPSCDVTEVDSGEI------AIGDYSVKAFAT 119 Query: 167 QHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKLQNLDFLIID 207 H +S G++ V CTD+ E L D ++++ Sbjct: 120 FHDTPASCGYQINTPDGKKVCVCTDLGTVTNEVDMHLSGCDLVLLE 165 >gi|281491110|ref|YP_003353090.1| ribonuclease Z [Lactococcus lactis subsp. lactis KF147] gi|281374860|gb|ADA64379.1| Ribonuclease Z [Lactococcus lactis subsp. lactis KF147] Length = 307 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 42/184 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P+ +N ++ + + ER + D G Sbjct: 1 MEIQFLGTGAGQ-------------PSKSRNT---QAIALKMLDERNEI--WLFDCGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQ-KRPIDVYAA----PDC 114 Q+L + I + TH H DHI G+ G R + + +++Y Sbjct: 43 QHQILNTTIKPRKITKIFITHLHGDHIFGLPGFLSSRSFQSSDEQTDLELYGPVGIKDFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + +N I++ E L H I L Sbjct: 103 LTALR---------ISGSRLAYRINFHEIDSAGKIFEDD----SFEVHTDLLDH-TILCL 148 Query: 175 GFRF 178 G+R Sbjct: 149 GYRV 152 >gi|226312569|ref|YP_002772463.1| hypothetical protein BBR47_29820 [Brevibacillus brevis NBRC 100599] gi|226095517|dbj|BAH43959.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 286 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 15/79 (18%) Query: 51 GSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G T+++D G F ++ R V D ++ TH H DH G+ Sbjct: 30 GERKTLLIDAGNSPAHAALFRQELQRLGVRLPDLLILTHWHWDHTFGMSEW--------- 80 Query: 105 PIDVYAAPDCMKHLFESFR 123 + A L + Sbjct: 81 DLPTIAQAKTAHSLSKLMG 99 >gi|186682856|ref|YP_001866052.1| hypothetical protein Npun_F2555 [Nostoc punctiforme PCC 73102] gi|186465308|gb|ACC81109.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 300 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 27/199 (13%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +I D G Q L++ + + + +T+ ++ I G F+ + Sbjct: 61 GGKRLIFDGGTGLRILGKTWQELQQPIQA--HLFFTNCQSNRIQGFPFFAPAFI-VENCF 117 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +Y S + C D P P+ + +++ + ++ ++ Sbjct: 118 HIYG---TAASNGASIKQCLY--DQMLQPHFPYPLQVMQSELQFYNLTPDSDVKLDDVII 172 Query: 167 QHGRI----SSLGFRFG----NVAYCTDVNA-----FPAESLEKLQNLDFLIIDALKNGL 213 I S+G+R +VAY TD++ LE ++ D LI +A Sbjct: 173 TTALINQTQRSVGYRVSWQDYSVAYVTDLHQNAEQVEQERILEFIKGADLLIANAT-YTP 231 Query: 214 HSSHFSLSESLKKIELINP 232 +SH S L +N Sbjct: 232 PTSHNHDSADLLWQAAVNA 250 >gi|313901852|ref|ZP_07835273.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter subterraneus DSM 13965] gi|313467895|gb|EFR63388.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter subterraneus DSM 13965] Length = 546 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 44/140 (31%), Gaps = 30/140 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++D G F L E+ + + TH H DHI GI Y Sbjct: 20 EQDLIVIDAGLAFPGDDMPGVDVVIPDYTYLIERRQKLRGIFLTHGHEDHIGGI----PY 75 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK+ + +YA + + D R PP I + + G Sbjct: 76 LLKEIQA-PIYATRLTLGLVERKL-----EEDKRALPP--RSRAIRPGE-----RVKAGA 122 Query: 159 IEAIPILQQHGRISSLGFRF 178 P L H S+GF Sbjct: 123 FTVEPFLVNHSIPDSVGFAI 142 >gi|323340662|ref|ZP_08080914.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] gi|323091785|gb|EFZ34405.1| metallo-beta-lactamase superfamily protein [Lactobacillus ruminis ATCC 25644] Length = 590 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 24/153 (15%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + I + ++ +DT PDF + LR+ I V TH HAD I + + Sbjct: 28 IYILDCGLKYPENELLGIDTVIPDF--EYLRQNARRIVGVFLTHGHADAIGALP-----Y 80 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + V+ + ++ A + + I + I +SA Sbjct: 81 FVSEFDVPVFGSELTIELAK-------IACANEDAAKDFDDFHIVDEKTEIDFESA---- 129 Query: 160 EAIPILQQHGRISSLGF----RFGNVAYCTDVN 188 H S G R GN+ Y D Sbjct: 130 TVSFFKTTHSVPESFGIVVKTRKGNIVYTGDFK 162 >gi|51011089|ref|NP_001003503.1| zinc phosphodiesterase ELAC protein 1 [Danio rerio] gi|50418112|gb|AAH78352.1| ElaC homolog 1 (E. coli) [Danio rerio] Length = 372 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 44/183 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R +S + R + D G Sbjct: 2 SMDVTFLGTG----------------SAYPSPHRG-ASALV----LRTEGENWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRP-----IDVYAAPD 113 +Q+++ + I V +H H DH+ G+ GL L + +D+Y Sbjct: 41 TQIQLMKSTLRAGKISKVFISHLHGDHLFGLPGLLCTISLNLNPQPDQPPPCVDIYGPRG 100 Query: 114 CMKHLFES---------FRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + F Y L ++P + ++ + G + Sbjct: 101 LRLFIRVALQLSGSQLLFPYAVHELQPSDEQCPEEGRLSPALTTASETLHPQERPGRTVH 160 Query: 161 AIP 163 P Sbjct: 161 PDP 163 >gi|289806115|ref|ZP_06536744.1| hypothetical protein Salmonellaentericaenterica_17382 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 147 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 5/75 (6%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQK---RPI 106 + ++D G +Q+++ + +I+ +L TH H+DHI L I Sbjct: 40 GDKIWLIDAGYGASLQLVKNGIPLRNINTILLTHLHSDHILDYPSLLMNAWASGLKDHTI 99 Query: 107 DVYAAPDCMKHLFES 121 VY P S Sbjct: 100 QVYGPPGTQAMTKAS 114 >gi|206890726|ref|YP_002249291.1| hypothetical protein THEYE_A1494 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742664|gb|ACI21721.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 339 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 5/111 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + D G D + ++L + + TH H DH G D + L+++ P+ V+ Sbjct: 26 ERRAFLFDVG-DIRK-IPFNEILKVSDIFVTHTHIDHFIGFDQVIRAVLRRQEPLRVFGP 83 Query: 112 PDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + ++ + Y + + D YP + I N + A + Sbjct: 84 KNLIECVHGKLKGYTWNLVAD--YPLQIEAYAITENRLKRAKFVASNSFKI 132 >gi|171915158|ref|ZP_02930628.1| Ysh1p: subunit of polyadenylation factor I, putative [Verrucomicrobium spinosum DSM 4136] Length = 451 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 64/206 (31%), Gaps = 42/206 (20%) Query: 37 RTR----SSLKISRVSERGSNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPH 85 R R +S I +R +I+D G D +++++L TH H Sbjct: 8 RRREIGANSYLIENGRQR-----IILDAGAHPKEKGHDSLPNFNSVPHDTVNSILVTHAH 62 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDC----MKHLFESFRYCFKALDDRTY--PPIVN 139 DHI + +++ VY L S + +++ P+ Sbjct: 63 HDHIGAL----PVLQRRQPRTPVYMTEPTGEVGAAMLHNSVNVMTRQREEQGIHEYPLFT 118 Query: 140 PIVIEN-------NDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---GNVA-YCTDVN 188 I+ D+ +E H I S G G A Y DVN Sbjct: 119 HKEIDGIKGRWNYRDLRRPFLLPDSEVECTFFDAGH-IIGSAGIMIRHEGKTAFYTGDVN 177 Query: 189 ----AFPAESLEKLQNLDFLIIDALK 210 E+ +D LII+ + Sbjct: 178 FESQTIAREADFPTTGIDTLIIETTR 203 >gi|323695131|ref|ZP_08109271.1| hypothetical protein HMPREF9475_04136 [Clostridium symbiosum WAL-14673] gi|323500812|gb|EGB16734.1| hypothetical protein HMPREF9475_04136 [Clostridium symbiosum WAL-14673] Length = 281 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 78/226 (34%), Gaps = 66/226 (29%) Query: 40 SSLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG--- 91 S+ +S +T V++DTG P + +V I+ ++ THP DHI G Sbjct: 53 CSILLS------GDTCVVIDTGEEEDAPHILELLKDNKVEKINCLILTHPDKDHIGGASY 106 Query: 92 IDGLRGYF-------------------LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + +++ I V + M F Y LD R Sbjct: 107 LLDQIPVVQVLAPYFEGEKPLYQELLARLEEKRIPV----ETMPRDRL-FTY--GDLDIR 159 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 +PP ++ND + +L +HG I Y D Sbjct: 160 VFPP-EKFHYNKSNDYS------------LAVLVKHGDIHLF--------YAGDAE---K 195 Query: 193 ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 E L +L LD ID K H + ++ IE + P+ A++T Sbjct: 196 ERLGELLKLDLPTIDVYKTAHHG--RNSKRGVELIEALKPEYAVVT 239 >gi|319778559|ref|YP_004129472.1| Hydroxyacylglutathione hydrolase [Taylorella equigenitalis MCE9] gi|317108583|gb|ADU91329.1| Hydroxyacylglutathione hydrolase [Taylorella equigenitalis MCE9] Length = 271 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPD 113 +DAVL TH H DH+ G+ G+ +F Q P+DVY + Sbjct: 46 LDAVLITHHHNDHVGGVKGIVDFFSHVQANPVDVYGPKN 84 >gi|114771835|ref|ZP_01449228.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium HTCC2255] gi|114547651|gb|EAU50542.1| Predicted hydrolase of the metallo-beta-lactamase superfamily protein [alpha proteobacterium HTCC2255] Length = 555 Score = 48.6 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 46/195 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHAD 87 + + +G ++ D G F ++E+ +D + TH H D Sbjct: 22 MYLYGYGPKGKERFILADVGVTFPAMDGTPGVDLIMADTKFIQERADRLDGIFITHAHED 81 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 HI I L +Y +DR + I+ Sbjct: 82 HIGAIGLLWP-----HLNAPIYCRKFTAAVAKAKM-------EDRNQSSDMIEIL----- 124 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVN---------AFPAES 194 P G + + H + G + + D+ F + Sbjct: 125 PPYPEMKKVGRFKVGILPVPHSIPEASGLVIETPDQRIIHTGDLKLDPNPVVGEPFNPKL 184 Query: 195 LEKL--QNLDFLIID 207 E L + +D L+ D Sbjct: 185 FEDLGKKGVDVLVCD 199 >gi|319939992|ref|ZP_08014346.1| metallo-beta-lactamase superfamily protein domain-containing protein [Streptococcus anginosus 1_2_62CV] gi|319810706|gb|EFW07033.1| metallo-beta-lactamase superfamily protein domain-containing protein [Streptococcus anginosus 1_2_62CV] Length = 560 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + I VL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRIKGVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ ++ I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELQFKNLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|312622527|ref|YP_004024140.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202994|gb|ADQ46321.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 295 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + + V +D V+ THPH DHI +D + Sbjct: 58 SILIKTP----ENKFVLIDSGPNSAEQDILQILDKLNVKKLDVVIATHPHEDHIGNMDKI 113 >gi|312871260|ref|ZP_07731358.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 3008A-a] gi|311093274|gb|EFQ51620.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 3008A-a] Length = 272 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 25 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 80 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 81 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 134 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 135 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 191 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 192 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQLLVKKS 240 >gi|260778076|ref|ZP_05886969.1| ribonuclease Z [Vibrio coralliilyticus ATCC BAA-450] gi|260606089|gb|EEX32374.1| ribonuclease Z [Vibrio coralliilyticus ATCC BAA-450] Length = 326 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 55/190 (28%), Gaps = 41/190 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG S G P + S + V E +VD G Sbjct: 1 MEICVLGT--SSGTPT---------------KARNVSA--TAVMESKGKGWFLVDCGEAT 41 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 Q+L + + A+ TH H DH +G+ GL +R P+ + A + L Sbjct: 42 QHQLLHTPLSLNYLKAIFITHLHGDHCYGLPGLLASAGMNRRSDPLIIIAPKGIREWLEA 101 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + P + + E+ G +H R + Sbjct: 102 TM-----QFTKLHLPYDLQFVSAESLP-----SMTIGQFTISLCELEH--------RVPS 143 Query: 181 VAYCTDVNAF 190 AYC + Sbjct: 144 FAYCFTESTI 153 >gi|289583052|ref|YP_003481518.1| beta-lactamase [Natrialba magadii ATCC 43099] gi|289532605|gb|ADD06956.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 342 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 15/84 (17%) Query: 46 RVSERGSNTTVIVDTGP-------DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR 96 + E + V+VD GP Q+ L + +IDAV+ THPH+DHI + LR Sbjct: 33 YLVEGPTGERVLVDAGPPGEQATETMRTQLNGLGVALETIDAVVITHPHSDHIGQVPALR 92 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFE 120 + VYA ++ + Sbjct: 93 A------AGVTVYAPEPALEQVRR 110 >gi|168213779|ref|ZP_02639404.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170714739|gb|EDT26921.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 291 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 20/193 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D + + +ID + THPH DHI G+D + F + Sbjct: 57 NGINMLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DV 111 Query: 107 DVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIP 163 + AP H +++ KA+ + I I+ D + + S Sbjct: 112 KSFYAPKV-AHTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTEVQVYSPVKSQYEE- 169 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 L + + + + + + D + + E L L D LK G H SH S SE Sbjct: 170 -LNNYSPVMKISYGQNSFMFTGDAESLVEK--EILNENKDLKADVLKLGHHGSHSSTSE- 225 Query: 224 LKKIELINPKNAI 236 + ++ ++P AI Sbjct: 226 -EFLKAVDPSIAI 237 >gi|163790301|ref|ZP_02184733.1| hypothetical protein CAT7_07573 [Carnobacterium sp. AT7] gi|159874372|gb|EDP68444.1| hypothetical protein CAT7_07573 [Carnobacterium sp. AT7] Length = 234 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 52/218 (23%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++++ G + Q + + + +H H DH I + ID Sbjct: 19 DDGISQILIECGIKLELVKQKMMFDFRRVAGMCISHEHGDHSKEIKKVL-----NTTSID 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++A+ + L + P + I G Sbjct: 74 IFASKGTLNAL--------------SVP------NHRATVLAIGKSVQIGSWSVTSFDVN 113 Query: 168 HGRISSLGFRFGN-----VAYCTDV-------NAFPAESLEKLQNLDFL--------IID 207 H GF F N + + TD +E +LD + + Sbjct: 114 HDAAEPTGFLFKNQLGEQLLFVTDTYYVKYKFKGITHMMIEANYSLDIIRKKVEEKEVAQ 173 Query: 208 ALKNGLHSSHFSLSESLKKIELINP----KNAILTHMH 241 LKN + +SHF S + I +N + L H+ Sbjct: 174 YLKNRILTSHFEFENSKEFI-KVNASDQLQEVWLLHLS 210 >gi|160902038|ref|YP_001567619.1| beta-lactamase domain-containing protein [Petrotoga mobilis SJ95] gi|160359682|gb|ABX31296.1| beta-lactamase domain protein [Petrotoga mobilis SJ95] Length = 275 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 58/234 (24%) Query: 54 TTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-------KQKRPI 106 ++ D G + L ++ I+ ++ TH H DHI G+ G + + + Sbjct: 20 DRILFDAGEGVSAE-LGNKIYGIEKIILTHSHVDHIAGL---WGIVNTRNNAMGNRNKKL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI-PIL 165 ++Y +++ E ++ K Y I+ ++ + I P Sbjct: 76 EIYYPQG-SENINEYLKFIGKMNKRLRY-------EIDFREITLSDTIPLNNKRFIKPFK 127 Query: 166 QQH-GRISSLGF-------------------RFGNVA----------YCTDVNAFPAESL 195 +H +S G+ ++ Y ++ +SL Sbjct: 128 TRHTPGETSFGYQILEQRKRLKEEYRELKESEIKDLIINKKEDILENYTANILTISGDSL 187 Query: 196 E----KLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 ++ L+ + K+ +H SL+E I + PK I+ H+ Sbjct: 188 PIPPNFAKDCGTLLHECTFFDEKDRKIRNHTSLAELKNLINISKPKRVIIYHVS 241 >gi|110798930|ref|YP_696186.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|168210087|ref|ZP_02635712.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|168216885|ref|ZP_02642510.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|110673577|gb|ABG82564.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|170711865|gb|EDT24047.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|182381073|gb|EDT78552.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 291 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 20/193 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D + + +ID + THPH DHI G+D + F + Sbjct: 57 NGINMLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DV 111 Query: 107 DVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIP 163 + AP H +++ KA+ + I I+ D + + S Sbjct: 112 KSFYAPKV-AHTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTEVQVYSPVKSQYEE- 169 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 L + + + + + + D + + E L L D LK G H SH S SE Sbjct: 170 -LNNYSPVMKISYGQNSFMFTGDAESLVEK--EILNENKDLKADVLKLGHHGSHSSTSE- 225 Query: 224 LKKIELINPKNAI 236 + ++ ++P AI Sbjct: 226 -EFLKAVDPSIAI 237 >gi|26990009|ref|NP_745434.1| metallo-beta-lactamase family protein [Pseudomonas putida KT2440] gi|24984930|gb|AAN68898.1|AE016521_7 metallo-beta-lactamase family protein [Pseudomonas putida KT2440] Length = 455 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 40/121 (33%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S ++R +T V+VD G Sbjct: 1 MQLTFLGGTGTVTG----------------------SKFLLTR-----DSTRVLVDCGLF 33 Query: 62 ---PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + Q L + ++DAV+ TH H DH +++ +YA P Sbjct: 34 QGFKQLRLRNWQPLPPALRALDAVVLTHAHLDHSG----YLPVLVREGYRGPIYATPATC 89 Query: 116 K 116 Sbjct: 90 A 90 >gi|197302117|ref|ZP_03167177.1| hypothetical protein RUMLAC_00844 [Ruminococcus lactaris ATCC 29176] gi|197298804|gb|EDY33344.1| hypothetical protein RUMLAC_00844 [Ruminococcus lactaris ATCC 29176] Length = 266 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 75/258 (29%), Gaps = 51/258 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 TILG G + + IS ++D G Sbjct: 1 MKLTILGTGNAT---VTEC--------------YNTCFVIS-----NKENHFMIDGGGGN 38 Query: 64 -FYMQVLREQV--LSIDAVLYTHPHADHIHGID-GLRGYFLKQKRPI-----DVYAAPDC 114 Q+ + + TH H DH+ GI +R R +Y + Sbjct: 39 MILHQLKSAGFDWKEMRDIFVTHKHIDHLLGIIWMMRMILQNMNRGTYDGEATIYGHEEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L + + + ++ +V+E+ + + G + + Sbjct: 99 IAILEKIAGEVLSEKETKNLGKRLHMVVVEDGEE---REIIGKPVTF--FDIHSTKAKQF 153 Query: 175 GFRFG-----NVAYCTDVNAFPAESLEKLQNLD-------FLIIDALKNGLHSSHFS-LS 221 GF + C D + QN L +A + + H S + Sbjct: 154 GFSMELEPGKKLTCCGD-EPYNEAEKVYAQNSQWLLHEAFCLFGEADQFKPYEKHHSTVK 212 Query: 222 ESLKKIELINPKNAILTH 239 ++ + E +N +N IL H Sbjct: 213 DACELGERLNVENLILYH 230 >gi|322383922|ref|ZP_08057652.1| DNA channel-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151399|gb|EFX44586.1| DNA channel-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 296 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRG 97 + T+++D G + Q++ + + +D V+ THP ADHI G+D + Sbjct: 66 NGKTMLIDAGDNDKEQLMLDYMKKYGITKLDIVIGTHPDADHIGGLDKVID 116 >gi|320333210|ref|YP_004169921.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319754499|gb|ADV66256.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 313 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 14/141 (9%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR------EQVLSIDAVLYTHPH 85 P R R + + + V++D G +++R A++ TH H Sbjct: 18 RPDVIRVRLPMVNAYLIGPPGGDWVLIDAGMVLNTRLIRQAARQHHDERPPSAIVLTHGH 77 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 DH+ + L + + VYA P + +L Y F ++P + Sbjct: 78 LDHVGSLHALL-----RIWDVPVYAHPLELPYLTGQHPYPFPDPTVGGVMSALSPAFVPG 132 Query: 146 N---DVPICMKSAGGVIEAIP 163 + A G + +P Sbjct: 133 PFDFRPNVRTLPADGSVPHLP 153 >gi|297617648|ref|YP_003702807.1| beta-lactamase [Syntrophothermus lipocalidus DSM 12680] gi|297145485|gb|ADI02242.1| beta-lactamase domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 303 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 9/69 (13%) Query: 52 SNTTVIVDTGPD----FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D F + LRE +V ID ++ THPHADHI G+D + F K Sbjct: 74 NGKVMLIDAGDDQNAPFIVDYLREHRVRVIDYLVATHPHADHIGGLDEVIEAFDIGK--- 130 Query: 107 DVYAAPDCM 115 VY Sbjct: 131 -VYMPRVTH 138 >gi|254518612|ref|ZP_05130668.1| ribonuclease Z [Clostridium sp. 7_2_43FAA] gi|226912361|gb|EEH97562.1| ribonuclease Z [Clostridium sp. 7_2_43FAA] Length = 160 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 23/86 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LGCG G+P +R SSL I+ +++D G + + Sbjct: 6 LLGCG--GGMPMP--------------KRNLSSLFINYKG-----RKILIDCGEGTQVAI 44 Query: 69 LREQV--LSIDAVLYTHPHADHIHGI 92 R + +ID +L TH H DHI G+ Sbjct: 45 RRMGLGFKAIDLILITHCHGDHIVGL 70 >gi|149199049|ref|ZP_01876089.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Lentisphaera araneosa HTCC2155] gi|149137838|gb|EDM26251.1| Metal-dependent Hydrolase of the beta-lactamase superfamily III [Lentisphaera araneosa HTCC2155] Length = 352 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 24/120 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 F LG S G P + R ++L RG + D G Sbjct: 18 LQFHFLGT--SAGSPTV--------------ERNVTAL---GFMPRGRKNWWLFDCGEGT 58 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 ++LR + ++ + TH H DH +G+ GL RG + + ++ + + Sbjct: 59 QQRLLRSSLSLPKLNKIFITHMHGDHCYGLFGLLTSRGLMSGGEEAVHIFGPKGIKEMIK 118 >gi|116670593|ref|YP_831526.1| beta-lactamase domain-containing protein [Arthrobacter sp. FB24] gi|116610702|gb|ABK03426.1| beta-lactamase domain protein [Arthrobacter sp. FB24] Length = 461 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 76/230 (33%), Gaps = 53/230 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--------SIDAVLYTHPHADHIHGI 92 S+ SR + ++VD G +VLR++ SIDA+L TH H DH Sbjct: 17 SVTGSRYLVEAAGKRILVDCGLFQGYKVLRDRNRIPFPVRPDSIDAILLTHAHLDHTG-- 74 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-----------YCFKALDDRTYPPI---- 137 ++ VYA + Y ++ R PP+ Sbjct: 75 --YVPALVRDGFNGPVYATEGTTELCTLLLPDSGHLQEEEAKYAYEHGSSRHSPPVPLYT 132 Query: 138 -------VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----------GN 180 ++ D P+ + GG I A + H + + R G+ Sbjct: 133 AADAVRSLDSFREHGFDTPLEL---GGGIAATFLPAGH-ILGAAQIRLAVGQHSVHFTGD 188 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 + D FP L D L+ ++ + H SL L+ E+I Sbjct: 189 LGRTDDPLMFPPR---GLGAADILVTES--TYGNRKHSSLDPELQLGEII 233 >gi|157165115|ref|YP_001467823.1| peptide ABC transporter, periplasmic peptide-binding protein [Campylobacter concisus 13826] gi|112801726|gb|EAT99070.1| metallo-beta-lactamase family protein [Campylobacter concisus 13826] Length = 717 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 22/159 (13%) Query: 40 SSLKI-----SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +S I S SE +++ PDF +R+ I V+ TH H DHI + Sbjct: 191 TSAIIVDIGMSFPSESMHGVDILI---PDF--DYVRKIKDKIKGVIITHAHEDHIGAV-- 243 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI--VNPIVIENNDVP-IC 151 YF K+ + +YA P + + F + + + P +I + +V I Sbjct: 244 --PYFYKEFK-FPIYATPLPLGMINNKFEEHGLKQERSLFRSVEKRKPYLIGDFEVEWIH 300 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 + + A+ I + G I G F+ + Y TD Sbjct: 301 ITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTD 339 >gi|52785428|ref|YP_091257.1| YkqC [Bacillus licheniformis ATCC 14580] gi|163119412|ref|YP_078844.2| essential RNase J1/J2, metallo-beta-lactamase superfamily protein YkqC [Bacillus licheniformis ATCC 14580] gi|319646169|ref|ZP_08000399.1| ribonuclease J 1 [Bacillus sp. BT1B_CT2] gi|52347930|gb|AAU40564.1| YkqC [Bacillus licheniformis ATCC 14580] gi|145902918|gb|AAU23206.2| essential RNase J1/J2, metallo-beta-lactamase superfamily protein YkqC [Bacillus licheniformis ATCC 14580] gi|317391919|gb|EFV72716.1| ribonuclease J 1 [Bacillus sp. BT1B_CT2] Length = 555 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEEKIKGLFITHGHEDHIGGIP-----YLLK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L K L++ +IE +D+ K++ Sbjct: 89 QVNIPVYGGQLAIGLLR-------KKLEEHGLLRQTKLHIIEEDDIVKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPQGNIVHTGDFK 166 >gi|332158292|ref|YP_004423571.1| hypothetical protein PNA2_0651 [Pyrococcus sp. NA2] gi|331033755|gb|AEC51567.1| hypothetical protein PNA2_0651 [Pyrococcus sp. NA2] Length = 210 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 39/189 (20%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++++D PD +++ +D +L TH H DH Y Sbjct: 17 GVSILIDPYPDVDE----DRIERVDYILITHEHMDH--------------------YGKT 52 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + L + Y ++ + + +V + G + +H Sbjct: 53 PLIARLND----AEVIGPKTVYLMAISDGITKVREVEAGQEFQLGEVRVKAFYTEHPTSQ 108 Query: 173 S-LGFRFG---NVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESLKKI 227 LG+ NVA+ D P S +L+ +D L L S S E++ I Sbjct: 109 YPLGYLIEGDKNVAHLGDTYYSP--SFRELRGRVDVL----LVPIGGRSTASEREAVDII 162 Query: 228 ELINPKNAI 236 + I P+ A+ Sbjct: 163 DAIRPRVAV 171 >gi|313673151|ref|YP_004051262.1| ribonuclease z [Calditerrivibrio nitroreducens DSM 19672] gi|312939907|gb|ADR19099.1| ribonuclease Z [Calditerrivibrio nitroreducens DSM 19672] Length = 323 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 8/141 (5%) Query: 53 NTTVIVDTGPDFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + D G + + +L + V +H H DH +G D + L+ ++PI Y Sbjct: 27 KDAFLFDCG---RLGDITNSELLDVRDVFVSHTHMDHFYGFDRILRGCLRSEKPIRFYGP 83 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P+ + ++ + ++YP + + ++ + SA ++ + Sbjct: 84 PNFINNVKGKLDG-YTWNLIKSYPLTIEVYELGVKNIKKAVFSALNGFVPE-YEKEVPKE 141 Query: 172 SSLGFRFGNVAYC-TDVNAFP 191 LG RF YC D Sbjct: 142 ELLGDRFQ-FDYCFFDHKTIS 161 >gi|297571216|ref|YP_003696990.1| RNA-metabolising metallo-beta-lactamase [Arcanobacterium haemolyticum DSM 20595] gi|296931563|gb|ADH92371.1| RNA-metabolising metallo-beta-lactamase [Arcanobacterium haemolyticum DSM 20595] Length = 557 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 47/184 (25%) Query: 53 NTTVIV-DTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++ D G F + +R+++ +ID ++ TH H DHI + Y Sbjct: 35 NGRILIVDCGVLFPEESQPGVDLILPDFDYIRDRMDAIDGIVLTHGHEDHIGAV----PY 90 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L+ + I + + + + L + P +V+E DV G Sbjct: 91 LLRLREDIPIIGSELTVALVE-------AKLAEHRIKPF--SMVVEEGDV-----EQIGP 136 Query: 159 IEAIPILQQHGRISSLGFRFGNVAY----CTDVN--------AFPA-ESLEKL--QNLDF 203 E + H +L +VA D + +L + +D Sbjct: 137 FECEFVAVNHSIPDALAVAIKSVAGTILHTGDFKMDQLPLDGRITDLRTFARLADEGVDL 196 Query: 204 LIID 207 ++D Sbjct: 197 FMVD 200 >gi|291546432|emb|CBL19540.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [Ruminococcus sp. SR1/5] Length = 233 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 62/203 (30%), Gaps = 43/203 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLR---EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++++D G Q+ +V + L TH H DH+ L + + Sbjct: 18 SDGQSSLLLDAGIPL-AQIQAGCGYKVSQLSGCLVTHGHGDHVKAAKALA----RMG--V 70 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++Y + + I V G E +P Sbjct: 71 NIYTSQGTADM------------------ANLTGHRI--CTVRALESFHAGTFEVLPFDV 110 Query: 167 QHGRISSLGFRF------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 +H LGF V Y TD + L ++++A + ++ Sbjct: 111 EHDVPEPLGFLIRSTVTGEKVLYFTDTVYI---KYTFI-GLTHIMMEA-NYDPETMEQNV 165 Query: 221 SESLKKIELINPKNAILTHMHVD 243 E +I K I +HM ++ Sbjct: 166 KE--GRIHAARAKRTIGSHMSIE 186 >gi|229140439|ref|ZP_04268994.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] gi|228643000|gb|EEK99276.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST26] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGHVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|170046825|ref|XP_001850949.1| cleavage and polyadenylation specificity factor subunit 2 [Culex quinquefasciatus] gi|167869453|gb|EDS32836.1| cleavage and polyadenylation specificity factor subunit 2 [Culex quinquefasciatus] Length = 747 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 67/182 (36%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++D G P+F + L++ V +IDAVL ++P H+ + L G K Sbjct: 26 DEVRFLLDCGWDEKFDPNFIKE-LKKYVHTIDAVLLSYPDGLHLGALPYLVG---KLGLN 81 Query: 106 IDVYAAPDCMK---------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +YA K ++ Y F + I+ + + +K G Sbjct: 82 CPIYATIPVYKMGQMFMYDLYMSHYNMYDFDLFTLDDVDAAFDKIIQLKYNQSVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 I P+ H G I + + G ++ Y TD N LEKLQ LI Sbjct: 142 YGITITPLPAGHLIGGTIWKV-VKVGEEDIVYATDFNHKKERHLNGCELEKLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|167838659|ref|ZP_02465518.1| beta-lactamase domain protein [Burkholderia thailandensis MSMB43] Length = 281 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQV--LSIDAVLYTHPHADHI 89 S++ I+ RG+ T+++D G +L + +ID +L TH H DH+ Sbjct: 52 SAVHINCYVVRGAGHTILIDAGAGGIKQWGGRLKTNLLLAGIEPSTIDTILLTHAHPDHV 111 Query: 90 HGIDGLRG 97 G+ + G Sbjct: 112 GGLVNMAG 119 >gi|303229273|ref|ZP_07316068.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] gi|302516046|gb|EFL57993.1| conserved hypothetical protein [Veillonella atypica ACS-134-V-Col7a] Length = 240 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 32/148 (21%) Query: 46 RVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 R+ + +++D G F + R L + L TH H DH ++ L + Sbjct: 17 RIKTSTNGDELLLDAGLPFKDIQRYCRFNFLHLCGTLLTHQHGDHSKAVNDLLKLGHR-- 74 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY D L Y + ++ V + G +P Sbjct: 75 ----VYMLSDTANAL---------------YVSDKHTAILITPKVQFMV----GNFSILP 111 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDV 187 +H + ++GF + + Y TD Sbjct: 112 FELEH-DVPNIGFLISDGEEKLLYITDT 138 >gi|210621194|ref|ZP_03292513.1| hypothetical protein CLOHIR_00456 [Clostridium hiranonis DSM 13275] gi|210154876|gb|EEA85882.1| hypothetical protein CLOHIR_00456 [Clostridium hiranonis DSM 13275] Length = 266 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 84/262 (32%), Gaps = 59/262 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G ++ ++ ++ ++VD G Sbjct: 1 MKITMLGTGNAM---VTKC--------------YNTTFVLT-----NGEKQLLVDGGGGN 38 Query: 65 Y--MQVLREQVL--SIDAVLYTHPHADHIHG-IDGLRGYFLKQKR-----PIDVYAAPDC 114 Q+ + +I + TH H DH+ G I +R K+ +++YA + Sbjct: 39 KIFNQLEDASIDWKNIKEIFVTHKHVDHVIGVIWMIRKICRSMKKGEYVGDVNIYAHGEL 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + + V+ I +E+ + + + + + + Sbjct: 99 CDIINSIAHMLLNKKETDFIGERVHIIPVEDGEEREIIGN-----KTVFFDIHSTKAKQF 153 Query: 175 GFRFGNVAYCTD-----VNAFP--AESLEKLQNLDFLIIDAL----------KNGLHSSH 217 GF ++ Y D P + + +N D+L+ +A H H Sbjct: 154 GF---SMIYDNDKKLTCCGDEPYNEKEEKYAKNSDWLLHEAFCLYSEADKFKPYEKH--H 208 Query: 218 FSLSESLKKIELINPKNAILTH 239 ++ ++ + + KN +L H Sbjct: 209 STVKDACELATELGIKNILLYH 230 >gi|260837252|ref|XP_002613619.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae] gi|229299005|gb|EEN69628.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae] Length = 302 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 37/176 (21%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH HADH G+ + +Y + K L F P +V Sbjct: 30 FLTHMHADHTSGLSPSWKH--------PIYCSEVTAKLLICKFD---------ITPALVR 72 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL----GFRFGNVAYCTDVNAFPA--- 192 P+ + + + ++ + H + + G+ FG++ Y D P Sbjct: 73 PLAVGESHILPLDETGQETMTVTVFDANHCPGAVMFLFQGY-FGSIFYTGDFRYSPEMFD 131 Query: 193 -ESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL 244 E L Q++D L +D S +E+ + I+ I I H D+ Sbjct: 132 HEVLANRQSIDVLYLDNTYCSPECKFPSR---TEATQMIKDI-----ICRHPGHDI 179 >gi|313624415|gb|EFR94429.1| metal-dependent beta-lactamase superfamily III protein [Listeria innocua FSL J1-023] Length = 203 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 33/179 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHG---IDGL 95 SS + + +++D G + IDA + +H H DH+ + + Sbjct: 20 SSYLLEEAGFK-----LLIDVGASAVSIMQNFIDPDDIDAAIISHYHPDHVADVGILQHI 74 Query: 96 RGYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 R K+++P + +Y + D+R Y + V + + Sbjct: 75 RLLSQKKEKPPVLPIYGHKE----------------DERGYSYLEMANVTKAVEYKADDT 118 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 G + + H + R Y D +A+ + +N D L+ D Sbjct: 119 LEIGPFKVAFLKTVH-PVPCYAMRIEAAGKIFVYTAD-SAYQDSFIPFAENADLLVTDT 175 >gi|309809755|ref|ZP_07703609.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 2503V10-D] gi|308169934|gb|EFO71973.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 2503V10-D] Length = 265 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 18 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 74 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVYSFATSHDAA 127 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 128 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 184 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 185 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQLLVKKS 233 >gi|301055288|ref|YP_003793499.1| N-terminla part of metallo-beta-lactamase family protein [Bacillus anthracis CI] gi|300377457|gb|ADK06361.1| N-terminla part of metallo-beta-lactamase family protein [Bacillus cereus biovar anthracis str. CI] Length = 317 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|296171681|ref|ZP_06852895.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894042|gb|EFG73805.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 558 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI GI Sbjct: 35 EHLGRLLIIDCGVMFPTHDEPGVDLILPDLRH--ISDRLDDIEALVLTHAHEDHIGGI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + LK + I V + + + + + P+ +E + +S Sbjct: 91 --PFLLKLRPDIPVVGSKFTLALVAA-----------KCREHRLKPVFVEVTE---RQRS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 THGVFECEYFAVNHSIPDALA 155 >gi|228909622|ref|ZP_04073445.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 200] gi|228849911|gb|EEM94742.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 200] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|228960003|ref|ZP_04121668.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799746|gb|EEM46698.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|228966742|ref|ZP_04127786.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792841|gb|EEM40399.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar sotto str. T04001] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229031428|ref|ZP_04187428.1| Zn-dependent hydrolase [Bacillus cereus AH1271] gi|228729717|gb|EEL80697.1| Zn-dependent hydrolase [Bacillus cereus AH1271] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229174463|ref|ZP_04301995.1| Zn-dependent hydrolase [Bacillus cereus MM3] gi|228609023|gb|EEK66313.1| Zn-dependent hydrolase [Bacillus cereus MM3] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|228916435|ref|ZP_04080002.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229186035|ref|ZP_04313205.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228597454|gb|EEK55104.1| Zn-dependent hydrolase [Bacillus cereus BGSC 6E1] gi|228843238|gb|EEM88319.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|228986941|ref|ZP_04147067.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157375|ref|ZP_04285453.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|229197908|ref|ZP_04324624.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228585626|gb|EEK43728.1| Zn-dependent hydrolase [Bacillus cereus m1293] gi|228626102|gb|EEK82851.1| Zn-dependent hydrolase [Bacillus cereus ATCC 4342] gi|228772719|gb|EEM21159.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|222097243|ref|YP_002531300.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] gi|221241301|gb|ACM14011.1| metallo-beta-lactamase family protein [Bacillus cereus Q1] Length = 510 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 14 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 61 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 62 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 116 Query: 185 TDVN 188 D Sbjct: 117 GDFK 120 >gi|194015504|ref|ZP_03054120.1| gp51 [Bacillus pumilus ATCC 7061] gi|194012908|gb|EDW22474.1| gp51 [Bacillus pumilus ATCC 7061] Length = 234 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 61/219 (27%), Gaps = 57/219 (26%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 T ++++ G F + L TH H DH + + + ID Y Sbjct: 20 DGKTPLLLECGITFKEMQRAFDFNMRFEGCLITHEHGDHCKALKDVL------RAGIDCY 73 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + K L + I N V G +P QH Sbjct: 74 MSHGTAKAL-----------------GVEKNHRI--NLVKARQAFRIGTWLIMPFDVQHD 114 Query: 170 RISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA---------------- 208 GF + + TD K L ++++ Sbjct: 115 VSEPYGFLLANEDGDKLLFATDTYYI----KYKFPGLTHIMVECNYSESILDTNIENGSI 170 Query: 209 ---LKNGLHSSHFSLSES---LKKIELINPKNAILTHMH 241 ++N L SHFSL L+ +L + L H+ Sbjct: 171 HKSMRNRLIQSHFSLENVKTFLEANDLSKVQEIWLLHLS 209 >gi|218898896|ref|YP_002447307.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228902299|ref|ZP_04066458.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] gi|228922512|ref|ZP_04085813.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|218545233|gb|ACK97627.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228837107|gb|EEM82447.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228857336|gb|EEN01837.1| Zn-dependent hydrolase [Bacillus thuringiensis IBL 4222] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|196034203|ref|ZP_03101613.1| metallo-beta-lactamase family protein [Bacillus cereus W] gi|195993277|gb|EDX57235.1| metallo-beta-lactamase family protein [Bacillus cereus W] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|152968163|ref|YP_001363947.1| ribonuclease Z [Kineococcus radiotolerans SRS30216] gi|189043785|sp|A6WFU4|RNZ_KINRD RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|151362680|gb|ABS05683.1| Ribonuclease Z [Kineococcus radiotolerans SRS30216] Length = 314 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRP 105 R T+V+ D G Q+L +V I+ + TH H DH G+ G+ R RP Sbjct: 28 RWDGTSVLFDPGEGTQRQMLHAEVSAPRIERICVTHRHNDHCLGVPGVLNRMAQDGPGRP 87 Query: 106 IDVYAAPDCMKHLF 119 + ++ D +HL Sbjct: 88 VTLHGPDDAFEHLR 101 >gi|49478379|ref|YP_037858.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329935|gb|AAT60581.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|47569068|ref|ZP_00239757.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] gi|47554230|gb|EAL12592.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] Length = 510 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 14 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 61 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 62 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 116 Query: 185 TDVN 188 D Sbjct: 117 GDFK 120 >gi|30263800|ref|NP_846177.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|42782883|ref|NP_980130.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|47778225|ref|YP_020574.2| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186647|ref|YP_029899.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|52141691|ref|YP_085138.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|65321125|ref|ZP_00394084.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bacillus anthracis str. A2012] gi|118479017|ref|YP_896168.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|165872604|ref|ZP_02217235.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167635847|ref|ZP_02394156.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167639771|ref|ZP_02398040.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170687820|ref|ZP_02879034.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170706828|ref|ZP_02897286.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177652083|ref|ZP_02934629.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190568402|ref|ZP_03021309.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196038463|ref|ZP_03105772.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|196044453|ref|ZP_03111688.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|206978197|ref|ZP_03239078.1| ribonuclease J 2 (RNase J2) [Bacillus cereus H3081.97] gi|217961218|ref|YP_002339786.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218904925|ref|YP_002452759.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225865777|ref|YP_002751155.1| ribonuclease J2 [Bacillus cereus 03BB102] gi|227813294|ref|YP_002813303.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228928847|ref|ZP_04091879.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935096|ref|ZP_04097924.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947518|ref|ZP_04109808.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092839|ref|ZP_04223973.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|229123311|ref|ZP_04252515.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|229601285|ref|YP_002868037.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254683495|ref|ZP_05147355.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254722016|ref|ZP_05183805.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254735836|ref|ZP_05193542.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254739638|ref|ZP_05197332.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254755989|ref|ZP_05208020.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254759350|ref|ZP_05211375.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|30258444|gb|AAP27663.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|42738810|gb|AAS42738.1| metallo-beta-lactamase family protein [Bacillus cereus ATCC 10987] gi|47551930|gb|AAT33049.2| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49180574|gb|AAT55950.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|51975160|gb|AAU16710.1| metallo-beta-lactamase family protein [Bacillus cereus E33L] gi|118418242|gb|ABK86661.1| metallo-beta-lactamase family protein [Bacillus thuringiensis str. Al Hakam] gi|164711636|gb|EDR17182.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167512172|gb|EDR87549.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167528804|gb|EDR91562.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170128246|gb|EDS97115.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170668136|gb|EDT18885.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172082452|gb|EDT67517.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190560406|gb|EDV14384.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|196024488|gb|EDX63160.1| metallo-beta-lactamase family protein [Bacillus cereus 03BB108] gi|196030871|gb|EDX69469.1| metallo-beta-lactamase family protein [Bacillus cereus NVH0597-99] gi|206743614|gb|EDZ55040.1| ribonuclease J 2 (RNase J2) [Bacillus cereus H3081.97] gi|217065243|gb|ACJ79493.1| metallo-beta-lactamase family protein [Bacillus cereus AH187] gi|218539519|gb|ACK91917.1| metallo-beta-lactamase family protein [Bacillus cereus AH820] gi|225787554|gb|ACO27771.1| ribonuclease J2 [Bacillus cereus 03BB102] gi|227003787|gb|ACP13530.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|228660087|gb|EEL15723.1| Zn-dependent hydrolase [Bacillus cereus 95/8201] gi|228690461|gb|EEL44244.1| Zn-dependent hydrolase [Bacillus cereus Rock3-42] gi|228812038|gb|EEM58369.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824566|gb|EEM70370.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830654|gb|EEM76259.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229265693|gb|ACQ47330.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|324327691|gb|ADY22951.1| metallo-beta-lactamase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 556 Score = 48.6 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|189461378|ref|ZP_03010163.1| hypothetical protein BACCOP_02033 [Bacteroides coprocola DSM 17136] gi|189431907|gb|EDV00892.1| hypothetical protein BACCOP_02033 [Bacteroides coprocola DSM 17136] Length = 272 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 80/265 (30%), Gaps = 61/265 (23%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + +LG G + +T + C N+ + + + G +++ Sbjct: 5 ETTELVMLGTGNAA----VTQCYNTCFALRHPNK--------TLLVDAGGGNGILI---- 48 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI----------DVYA 110 Q+ + + I A+ TH H DHI G + ++ + VY Sbjct: 49 ----QLEKAGIPLTDIHAMFITHAHTDHILG----AVWVVRVVAQLMQAGKYEGTFHVYG 100 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++ L R A + +++N M G + Sbjct: 101 HDKAIQALDWICRMTLPAKIVARLGNGIELHIVDNG-----MCFEAGGFTLQCFDIASTK 155 Query: 171 ISSLGFRFGNVAYCTDVNAF------PAESL--EKLQNLDFLIIDAL-------KNGLHS 215 GF D P L + + D+L+ +A + + Sbjct: 156 EKQYGFS----TILPDGKKLVCLGDEPYNELNHDYVMGADWLLCEAFCLYDDRERFKPYE 211 Query: 216 SHFSLS-ESLKKIELINPKNAILTH 239 H S + ++ + ++ KN +L H Sbjct: 212 KHHSTALDAGRLASKLDVKNLLLYH 236 >gi|30261795|ref|NP_844172.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47527029|ref|YP_018378.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229600379|ref|YP_002866181.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|30256023|gb|AAP25658.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47502177|gb|AAT30853.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229264787|gb|ACQ46424.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 419 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V ++AV +H H DH G+ L Y K+K Sbjct: 20 KNKETKILFDCGINRSYEDSYPKIEREVVPFLEAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|65319072|ref|ZP_00392031.1| COG1782: Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [Bacillus anthracis str. A2012] Length = 420 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE V ++AV +H H DH G+ L Y K+K Sbjct: 21 KNKETKILFDCGINRSYEDSYPKIEREVVPFLEAVFLSHIHEDHTMGLPLLAKYGYKKK- 79 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 80 ---IWTTRYTKEQL 90 >gi|99080604|ref|YP_612758.1| beta-lactamase-like [Ruegeria sp. TM1040] gi|99036884|gb|ABF63496.1| beta-lactamase-like protein [Ruegeria sp. TM1040] Length = 555 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 29/154 (18%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L E+ ++ + TH H D Sbjct: 21 AYVYGYGAPGKERLILVDLGVAFPDMDTTPGVDLIMPDISWLAERADQLEGIFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD----RTYPPI--VNPI 141 HI + L + + VYA D +P + + P Sbjct: 81 HIGAVAHLYS-----RLNVPVYARAFTANIARRKMEEQGHDPDSVVTISPWPEVTKLGPF 135 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 I + + +GG++ P GR+ G Sbjct: 136 TIGAVPISHSIPESGGLVIDSPA----GRVIHTG 165 >gi|306825701|ref|ZP_07459040.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432062|gb|EFM35039.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 553 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 20/127 (15%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 M+ L E I V TH HAD I + +L + + V+ + ++ Sbjct: 52 MEYLFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----L 101 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 F +D T + VI+ N GG + H SLG GN+ Sbjct: 102 FVKGND-TVKKFNDFHVIDEN----TEIDFGGTV-VSFFRTTHSIPESLGVVLKTPKGNI 155 Query: 182 AYCTDVN 188 Y D Sbjct: 156 VYTGDFK 162 >gi|297544364|ref|YP_003676666.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842139|gb|ADH60655.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 757 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 24/208 (11%) Query: 58 VDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VY-AAPDC 114 D G D + L V+ +D V +H DH+ GI + Q+ ++ ++ Sbjct: 536 FDAGEDILLPFLYYKGVMKLDGVFISHTDIDHVGGI-----LTILQQMKVNKIFVGIQKV 590 Query: 115 MKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++F+ + + P + + I ++ ++ + +IE PI G Sbjct: 591 AD---DNFKKLMEVAKSKNIPVVFLKRGDKIKVDGVEIYVLHPDPLNLIEENPINNN-GL 646 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 + + ++ + D + E L+NLD D LK H S S S S + IE I Sbjct: 647 VFKIKYKDMEFLFTGD---IEKPAEEILKNLDI-KADILKVPHHGS--STSSSKEFIEKI 700 Query: 231 NPKNAIL-TH-MHVDLDYDMVLKSTPSR 256 NPK I+ L ++ VLKS R Sbjct: 701 NPKVCIIQVGKNSYGLPHERVLKSLQER 728 >gi|289578091|ref|YP_003476718.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter italicus Ab9] gi|289527804|gb|ADD02156.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter italicus Ab9] Length = 757 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 24/208 (11%) Query: 58 VDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VY-AAPDC 114 D G D + L V+ +D V +H DH+ GI + Q+ ++ ++ Sbjct: 536 FDAGEDILLPFLYYKGVMKLDGVFISHTDIDHVGGI-----LTILQQMKVNKIFVGIQKV 590 Query: 115 MKHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++F+ + + P + + I ++ ++ + +IE PI G Sbjct: 591 AD---DNFKKLMEVAKSKNIPVVFLKRGDKIKVDGVEIYVLHPDPLNLIEENPINNN-GL 646 Query: 171 ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELI 230 + + ++ + D + E L+NLD D LK H S S S S + IE I Sbjct: 647 VFKIKYKDMEFLFTGD---IEKPAEEILKNLDI-KADILKVPHHGS--STSSSKEFIEKI 700 Query: 231 NPKNAIL-TH-MHVDLDYDMVLKSTPSR 256 NPK I+ L ++ VLKS R Sbjct: 701 NPKVCIIQVGKNSYGLPHERVLKSLQER 728 >gi|253577655|ref|ZP_04854963.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842947|gb|EES70987.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 236 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 N +I+D G + + R + L I+A+L TH H DHI G+D +++ + VY Sbjct: 50 EDENRAIIIDPGSNPGPLLRRIEGLEIEAILLTHAHFDHIGGLD-----QIRKAKNCPVY 104 Query: 110 AAP 112 P Sbjct: 105 VHP 107 >gi|228943546|ref|ZP_04105981.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973795|ref|ZP_04134372.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980350|ref|ZP_04140661.1| Zn-dependent hydrolase [Bacillus thuringiensis Bt407] gi|228779455|gb|EEM27711.1| Zn-dependent hydrolase [Bacillus thuringiensis Bt407] gi|228785947|gb|EEM33949.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228816133|gb|EEM62323.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941509|gb|AEA17405.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar chinensis CT-43] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENEERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|254479042|ref|ZP_05092398.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] gi|214035038|gb|EEB75756.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] Length = 287 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 9/51 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQ-------VLSIDAVLYTHPHADHIHGIDGL 95 +++D G + Q + IDA++ TH H DH GI + Sbjct: 37 EKRNILIDVGQNI--QAIAHNMELMGISFKEIDAIVLTHCHYDHTQGIVEV 85 >gi|83312194|ref|YP_422458.1| hypothetical protein amb3095 [Magnetospirillum magneticum AMB-1] gi|82947035|dbj|BAE51899.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 870 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 26/155 (16%) Query: 57 IVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 ++D GP+ + L + I+ + +TH H DH G+ L ++ R I +A P Sbjct: 256 LIDAGPNLIYSLNALGIGINEIEGIFHTHSHDDHFAGLTTL----IRADRRIKYHATPMV 311 Query: 115 MKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + + D Y + + + E NDV G +E PI H + Sbjct: 312 RAAVTKKLAALLSIEEEDFSDYFDVCDLTLGEWNDV--------GGLEVRPIFSPH-PVE 362 Query: 173 SLGFRFGNVA---YCTDVNAFPAESLEKLQNLDFL 204 + F F +A Y T + + + LD L Sbjct: 363 TTPFYFRVMAEGGYRTYAH------MADISGLDVL 391 >gi|182624689|ref|ZP_02952470.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177910086|gb|EDT72480.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 291 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 20/193 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G D + + +ID + THPH DHI G+D + F + Sbjct: 57 NGINMLIDAGTNAGANDLVKDLKNRGIKTIDIAIATHPHEDHIGGMDEVLENF-----DV 111 Query: 107 DVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIVIE-NNDVPICMKSAGGVIEAIP 163 + AP H +++ KA+ + I I+ D + + S Sbjct: 112 KSFYAPKV-AHTTKTYENMLKAVKNEGLKIKQIKEGTKIDLGKDTEVQVYSPVKSQYEE- 169 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 L + + + + + + D + + E L L D LK G H SH S SE Sbjct: 170 -LNNYSSVMKISYGQNSFMFTGDAESLVEK--EILNENKDLKADVLKLGHHGSHSSTSE- 225 Query: 224 LKKIELINPKNAI 236 + ++ ++P AI Sbjct: 226 -EFLKAVDPSIAI 237 >gi|89053690|ref|YP_509141.1| beta-lactamase-like [Jannaschia sp. CCS1] gi|88863239|gb|ABD54116.1| beta-lactamase-like protein [Jannaschia sp. CCS1] Length = 558 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 57/201 (28%), Gaps = 50/201 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D L G + I + + G ++VDT Sbjct: 1 MSDRNRLIYLPIGGAG---EIGMNC-----------------YVYGYGPEGQERLIVVDT 40 Query: 61 G---PDFYMQ-----------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 G PD Q L ++ I+A+ TH H DH+ + L G + Sbjct: 41 GVAFPDMDGQPGVDLILPDVDWLEDRKGRIEAIFITHAHEDHVGAVGHLWG-----RLEA 95 Query: 107 DVYAAPDCMKHLFESFRYCFK----ALDDRTYPPIVN--PIVIENNDVPICMKSAGGVIE 160 VY H YP +V P + V + A G++ Sbjct: 96 PVYCRKFTAIHAMRKMDEAGHDAAQVRVVEAYPDVVEAGPFKVSFAPVSHSIPEASGLV- 154 Query: 161 AIPILQQHGRISSLG-FRFGN 180 I GR+ G ++ Sbjct: 155 ---IDSDAGRVIHSGDYKIDR 172 >gi|29349754|ref|NP_813257.1| ribonuclease Z [Bacteroides thetaiotaomicron VPI-5482] gi|41017553|sp|Q89ZN1|RNZ_BACTN RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|29341664|gb|AAO79451.1| conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain [Bacteroides thetaiotaomicron VPI-5482] Length = 316 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ K L Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSP----KGL 96 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E F + +T V E + + + IP+ RI GF F Sbjct: 97 EELFA-PLLSFFCKTLAYKVFFHEFETKEPTLIYDDRSVAVTTIPLRH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|288941182|ref|YP_003443422.1| beta-lactamase domain-containing protein [Allochromatium vinosum DSM 180] gi|288896554|gb|ADC62390.1| beta-lactamase domain protein [Allochromatium vinosum DSM 180] Length = 279 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 38/209 (18%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++DTG R + + AV +H H DH G++ + Sbjct: 31 EADAHCLLLDTGQGLTLRHNAARLGIALERVTAVALSHGHYDHTGGLETVIE---CTGGA 87 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 ID+Y P+ + F P + V+ + + G IE P + Sbjct: 88 IDLYLHPEALAP-------KFNRDGRSIGSPTTDLEVLRPRVRRLIADT--GPIEIRPGI 138 Query: 166 QQHGRISS------LGFRFGNVAYCTDVNAFPAES---LEKLQNLDFLIIDALKNGLHSS 216 Q G I G F A T+++ P + + L L +++ Sbjct: 139 QLSGEIPRRHAIEDTGGPFYRDAARTEIDDLPDDQALIINTLAGL-VVVLGC-------G 190 Query: 217 HFSLSESLKKIELINPKN---AIL--THM 240 H L +L + + P AIL TH+ Sbjct: 191 HSGLINTLDHVRTLAPGRPIHAILGGTHL 219 >gi|320590685|gb|EFX03128.1| metallo-beta-lactamase superfamily protein [Grosmannia clavigera kw1407] Length = 606 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTGPDFYMQV------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++DTG F L E +++ VL TH H DH G+ L + + Sbjct: 68 GPERILIDTGQGFPTWAELIAATLSEHNITVSHVLLTHWHGDHTGGVPDLLRLYPHLRTR 127 Query: 106 I 106 I Sbjct: 128 I 128 >gi|257869959|ref|ZP_05649612.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804123|gb|EEV32945.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 205 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 38/112 (33%), Gaps = 10/112 (8%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 A+L TH H DHI +D LR Y+ I VY +P L + + D Sbjct: 46 KPSAILLTHTHYDHIGAVDHLRDYY-----SIPVYVSPLEQDWLGDPLKNLSGRHPDLGG 100 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P E + + A P H I S+ F F + D Sbjct: 101 I-TARPAEHELALKDYQIDGISFRVVATP---GHS-IGSVSFIFDDFVVSGD 147 >gi|254818757|ref|ZP_05223758.1| ribonuclease Z [Mycobacterium intracellulare ATCC 13950] Length = 280 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 52/191 (27%), Gaps = 43/191 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ P P R S + + + D G Sbjct: 2 IEVTLLGTGS----PI------------PDPNRAGPSTLVRAGGQ-----VFLADCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDG-----LRGYFLKQKRPIDVYAAP----- 112 + + A+L TH H+DH+ + F P+ + P Sbjct: 41 LQRAAAVGVGAAGLSALLLTHLHSDHVGDLGDVLITRWISTFTPDPAPLPIIGPPGTAEL 100 Query: 113 --DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV--PICMKSAGGVIEAIPILQQH 168 +K Y D PP V + V + G + P+ Sbjct: 101 VEATLKAFHHDIGYRIAHHADLNAPPAVEVHEYTDGPVWDRDGVSIRVGATDHRPVA--- 157 Query: 169 GRISSLGFRFG 179 ++GFR Sbjct: 158 ---PTIGFRIE 165 >gi|229081052|ref|ZP_04213563.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] gi|228702256|gb|EEL54731.1| Zn-dependent hydrolase [Bacillus cereus Rock4-2] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229098267|ref|ZP_04229214.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] gi|229104360|ref|ZP_04235029.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|229117284|ref|ZP_04246662.1| Zn-dependent hydrolase [Bacillus cereus Rock1-3] gi|228666184|gb|EEL21648.1| Zn-dependent hydrolase [Bacillus cereus Rock1-3] gi|228679058|gb|EEL33266.1| Zn-dependent hydrolase [Bacillus cereus Rock3-28] gi|228685165|gb|EEL39096.1| Zn-dependent hydrolase [Bacillus cereus Rock3-29] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229146368|ref|ZP_04274739.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] gi|228637001|gb|EEK93460.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST24] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229151997|ref|ZP_04280193.1| Zn-dependent hydrolase [Bacillus cereus m1550] gi|228631552|gb|EEK88185.1| Zn-dependent hydrolase [Bacillus cereus m1550] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229180075|ref|ZP_04307419.1| Zn-dependent hydrolase [Bacillus cereus 172560W] gi|228603284|gb|EEK60761.1| Zn-dependent hydrolase [Bacillus cereus 172560W] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|261365036|ref|ZP_05977919.1| metallo-beta-lactamase domain protein [Neisseria mucosa ATCC 25996] gi|288566626|gb|EFC88186.1| metallo-beta-lactamase domain protein [Neisseria mucosa ATCC 25996] Length = 210 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 12/129 (9%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTLL----WDDETREAVLTDVGGDVSFLLQELDAKNLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 LR + RP+ V + L ++ A P P + + + Sbjct: 70 LR-----EHRPVPVIGPHADDEFLLQALPET-TAQYGFPVSPAFEPTRWLTEGETLKVGN 123 Query: 155 AGGVIEAIP 163 + IP Sbjct: 124 HAFQVLHIP 132 >gi|206972632|ref|ZP_03233574.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228954074|ref|ZP_04116103.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229047483|ref|ZP_04193073.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|229071296|ref|ZP_04204519.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|229111269|ref|ZP_04240822.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|229129073|ref|ZP_04258046.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|229191922|ref|ZP_04318892.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|296504294|ref|YP_003665994.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] gi|206732445|gb|EDZ49625.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|228591473|gb|EEK49322.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228654310|gb|EEL10175.1| Zn-dependent hydrolase [Bacillus cereus BDRD-Cer4] gi|228672045|gb|EEL27336.1| Zn-dependent hydrolase [Bacillus cereus Rock1-15] gi|228711750|gb|EEL63702.1| Zn-dependent hydrolase [Bacillus cereus F65185] gi|228723730|gb|EEL75085.1| Zn-dependent hydrolase [Bacillus cereus AH676] gi|228805640|gb|EEM52230.1| Zn-dependent hydrolase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296325346|gb|ADH08274.1| Zn-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|218234241|ref|YP_002368599.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] gi|218162198|gb|ACK62190.1| metallo-beta-lactamase family protein [Bacillus cereus B4264] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|212716222|ref|ZP_03324350.1| hypothetical protein BIFCAT_01138 [Bifidobacterium catenulatum DSM 16992] gi|212660734|gb|EEB21309.1| hypothetical protein BIFCAT_01138 [Bifidobacterium catenulatum DSM 16992] Length = 684 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ +DA++ TH H DHI G+ Y L Sbjct: 152 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVDALVLTHGHEDHIGGV----PYLL 205 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + +NP ++E K G Sbjct: 206 KLRPDIPLIGSKLTLAFVEAKCK-----------EHRINPRLVEVKGRD---KLKVGPFN 251 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L F D + L KL + +D L+ Sbjct: 252 LEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLM 311 Query: 206 ID 207 +D Sbjct: 312 MD 313 >gi|168035932|ref|XP_001770462.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678170|gb|EDQ64631.1| predicted protein [Physcomitrella patens subsp. patens] Length = 857 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 27/98 (27%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ++ LG G+S P R S + ERG +I+D G Sbjct: 467 REEMEIVFLGTGSSQ----------------PSKYR-NVSAIYMHLFERGG---IILDCG 506 Query: 62 PDFYMQVLREQVLSIDAVL-------YTHPHADHIHGI 92 Y Q+ R D VL +H HADH G+ Sbjct: 507 EGSYAQLRRRYGSQTDDVLAGLKLVWISHIHADHHTGL 544 >gi|332178148|gb|AEE13837.1| beta-lactamase domain protein [Thermodesulfobium narugense DSM 14796] Length = 285 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 13/75 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I T + DTG L++ + +IDA++ +H H+DH G+ L Sbjct: 32 SALIET-----ERQTFLYDTGSSGIVLLNNAHRLKKDLKNIDAIILSHNHSDHTGGLFAL 86 Query: 96 RGYFLKQKRPIDVYA 110 Y ++ I VYA Sbjct: 87 LDY---LRKDIRVYA 98 >gi|148726572|emb|CAN87929.1| elaC homolog 1 (E. coli) [Danio rerio] Length = 372 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 44/183 (24%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG G P R +S + R + D G Sbjct: 2 SMDVTFLGTG----------------SAYPSPHRG-ASALV----LRTEGENWLFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR---GYFLKQKRP-----IDVYAAPD 113 +Q+++ + I V +H H DH+ G+ GL L + +D+Y Sbjct: 41 TQIQLMKSTLRAGKISKVFISHLHGDHLFGLPGLLCTISLNLNPQPDQPPPCVDIYGPRG 100 Query: 114 CMKHLFES---------FRYCFKALDDR----TYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + F Y L ++P + ++ + G + Sbjct: 101 LRLFIRVALQLSGSQLLFPYAVHELQPSDEQCPEEGHLSPALTTASETLHPQERPGRTVH 160 Query: 161 AIP 163 P Sbjct: 161 PDP 163 >gi|145344100|ref|XP_001416576.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576802|gb|ABO94869.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 285 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 19/143 (13%) Query: 52 SNTTVIVDTGPDFY-------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 V++D G + + VL TH H DH+ G+ RG Sbjct: 32 GRERVLIDCGEGRRGYAKNVIEAMRASGCERLKCVLLTHWHPDHVGGL---RGLRKALGE 88 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + Y K +++ + R Y + I++ DV + G + AI Sbjct: 89 NVPAYKRIRTSKGEYDAREGMVSPYNVRAY------VDIQDGDV---IAVPGATLRAIYT 139 Query: 165 LQQHGRISSLGFRFGNVAYCTDV 187 F + D Sbjct: 140 PGHTTDHMCFAFEEEGAVFAGDC 162 >gi|227553230|ref|ZP_03983279.1| metallo-beta-lactamase domain protein [Enterococcus faecalis HH22] gi|257085311|ref|ZP_05579672.1| hypothetical protein EFKG_01106 [Enterococcus faecalis Fly1] gi|227177596|gb|EEI58568.1| metallo-beta-lactamase domain protein [Enterococcus faecalis HH22] gi|256993341|gb|EEU80643.1| hypothetical protein EFKG_01106 [Enterococcus faecalis Fly1] Length = 233 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 63/222 (28%) Query: 51 GSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N++++++ G D Q + +I +L TH H DH I+ + D Sbjct: 20 DGNSSLMLEAGLKPKDIMKQGI--NFSNIQGLLVTHEHGDHSKYINDIL-----LAGRFD 72 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A+ ++ L ++ R+ +++ N G P Sbjct: 73 VWASRGTLEAL---------GINRRS-------HILKANQQQ-----KIGDWLVKPFATI 111 Query: 168 HGRISS-----LGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------- 208 H + LGF + + TD N P + +++ +++ Sbjct: 112 HDDKKARAREPLGFLILSPSGKKIVFATDTNYLP----KTFKDVTHWLVECNHDIKLVRQ 167 Query: 209 ------LKNGLHSSHFSLSESLKKIE---LINPKNAILTHMH 241 +++ + +H S+ K + L + L H+ Sbjct: 168 SKLPKSVQDRILRTHMSIDACKKFFQSTDLTKTEEIYLIHLS 209 >gi|157151588|ref|YP_001449538.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus gordonii str. Challis substr. CH1] gi|157076382|gb|ABV11065.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus gordonii str. Challis substr. CH1] Length = 560 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + VL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKGVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ ++ I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELKFKNLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|145527326|ref|XP_001449463.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417051|emb|CAK82066.1| unnamed protein product [Paramecium tetraurelia] Length = 869 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 39/199 (19%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 GV + G +PK +S I V+ RG ++VD P + + + SI Sbjct: 349 GVTILGCSHG----FDPK---GSTSGYIFWVNGRG----IMVDPPPFASYHMKQMGIPSI 397 Query: 77 --DAVLYTHPHADHIHG-----IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 AV+ +H HADH G +D R + + + SF + A+ Sbjct: 398 LICAVIISHCHADHDAGTFHKILDDTRVEII-------------TTRTIMNSFLRKYSAM 444 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT 185 + + + + I + G H I SLGF ++ + + Sbjct: 445 SNIDVDSLRRLFIFRPAIIGIPLNIYGAYFNF--FYAMH-TIPSLGFSVKLENKSMYFSS 501 Query: 186 DVNAFPAESLEKLQNLDFL 204 D F + L +N L Sbjct: 502 DT-FFDPDQLLVYKNQGIL 519 >gi|303239172|ref|ZP_07325701.1| ComE-like protein [Acetivibrio cellulolyticus CD2] gi|302593217|gb|EFL62936.1| ComE-like protein [Acetivibrio cellulolyticus CD2] Length = 291 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 30/207 (14%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + T+++DTG +F + + + ID ++ TH H DHI Sbjct: 45 SILVQT-----GSKTMLIDTGLKEKEDEFMEYLSSQGIKKIDYLILTHQHNDHIG----N 95 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +K + +Y + F KA++ + I + A Sbjct: 96 AAKVIKSFKIGMIYMPSVTSND--KKFESMVKAINQKGLS-----ITAPVSGSSFDFGDA 148 Query: 156 GGVIEAIP-----ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 +I A + + + ++ + + D + + D L D LK Sbjct: 149 KCLIMAPNSKKYEDENNYSIVLKMIYKNTSFLFSGDAQFLSETEM-IGKGYD-LSADVLK 206 Query: 211 NGLHSSHFSLSESLKKIELINPKNAIL 237 G H S + S + + +NPK A L Sbjct: 207 IGHHGS--DTATSEEFLNKVNPKYAAL 231 >gi|298384026|ref|ZP_06993587.1| ribonuclease Z [Bacteroides sp. 1_1_14] gi|298263630|gb|EFI06493.1| ribonuclease Z [Bacteroides sp. 1_1_14] Length = 316 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ K L Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSP----KGL 96 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E F + +T V E + + + IP+ RI GF F Sbjct: 97 EELFA-PLLSFFCKTLAYKVFFHEFETKEPTLIYDDRSVAVTTIPLRH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|229162733|ref|ZP_04290690.1| Zn-dependent hydrolase [Bacillus cereus R309803] gi|228620615|gb|EEK77484.1| Zn-dependent hydrolase [Bacillus cereus R309803] Length = 556 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 27/127 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 L + V+ I+ N + S G +IP S+G F G V Sbjct: 108 LGEAGMLGRVDLKTIDANSTVEFDTTTVSFFGTTHSIP--------DSVGVCFHTSKGAV 159 Query: 182 AYCTDVN 188 Y D Sbjct: 160 VYTGDFK 166 >gi|169831662|ref|YP_001717644.1| beta-lactamase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638506|gb|ACA60012.1| beta-lactamase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 253 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 28/218 (12%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 R+ S R T V+++ G + ++ ++ AV+ +H H DH + LR Sbjct: 14 RAGGACSGYLLRDRETLVLLEAGNGSFSRLAAAVDFRALSAVVVSHFHLDHCADLFCLRH 73 Query: 98 YFLKQKR------PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 +R P+ ++ + F + IE+ Sbjct: 74 ALKGARRDGSRAEPLTLFVPQE----PRGEFERLAGDNE------AFTVRTIESLPRKGD 123 Query: 152 MKSAG-GVIEAIPILQQHGR----ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII 206 + A G +E + +H ++ G G Y D FP + L+ Sbjct: 124 RRVAIAGSLEIEFLPTRHSSPGYGVAVSGSARGCFVYSGDTAYFPELARHW-AGAGLLLC 182 Query: 207 DALKNGLHSS-----HFSLSESLKKIELINPKNAILTH 239 +A S+ H + ++ + +LTH Sbjct: 183 EATGLARDSAQLKAVHLTSVQAGELARASGAARLVLTH 220 >gi|227535925|ref|ZP_03965974.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300] gi|300771633|ref|ZP_07081508.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861] gi|227244168|gb|EEI94183.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300] gi|300761622|gb|EFK58443.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861] Length = 260 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 77/219 (35%), Gaps = 52/219 (23%) Query: 52 SNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++ ++VD G + M L Q +I A+ TH H DHI G+ +K + Sbjct: 20 NDSAILVDAGINSKHIHLRMGNLGIQPDTIKAIFITHEHTDHIRGLS-----VFSKKYNL 74 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY + R + P VI+ +D K G + I + Sbjct: 75 PVYITEGSYRG-------------SRLHLPSHLVHVIKPDD-----KVEIGELTVYGIPK 116 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H F N+ TD+ +Q+ D L++++ L+ G +S Sbjct: 117 YHDAKEPCSFLVSDGQYNIGILTDIGRACDNVRYVIQHADILLLESNYDEEMLRTGRYSY 176 Query: 216 ----------SHFSLSESLKKI---ELINPKNAILTHMH 241 H S + SL+ K+ ILTH+ Sbjct: 177 YLKNRISSGWGHISNTVSLEIFNNCRSSRLKHLILTHLS 215 >gi|254500670|ref|ZP_05112821.1| metallo-beta-lactamase superfamily protein [Labrenzia alexandrii DFL-11] gi|222436741|gb|EEE43420.1| metallo-beta-lactamase superfamily protein [Labrenzia alexandrii DFL-11] Length = 352 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERG--SNTTVIVDT 60 + T+ G G P G GA + SE ++ + DT Sbjct: 25 NCLKVTL--TGTQGGPPVFQGQAGA-------------GTLVQYGSEENKCNDMRLQFDT 69 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRP-IDVYAAPDC 114 G ++ + V IDA+ +H H+DH G+ + + P +D+ + + Sbjct: 70 GRGTTQRLSQAGVPVGKIDAIFLSHLHSDHTEGLADMMQLRWHFNSGGPKVDLVCSEET 128 >gi|167045084|gb|ABZ09747.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_APKG8I13] Length = 300 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 96/322 (29%), Gaps = 82/322 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG + P R + + + R E ++ D G Sbjct: 2 MELVFLGTAGAQ----------------PTLERYTTCVCLVREGEI-----LMFDAGEGA 40 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 L+ + + TH H DHI GI G QKR I++Y + + Sbjct: 41 QTSYLKSSLGWNKKMKIFVTHLHGDHIIGILGFLQTMTLQKRTEAIEIYGPEGIEEFIAA 100 Query: 121 -----------------------------------------SFRYCFKALDDRT--YPPI 137 +F Y FK + YP Sbjct: 101 NTKIMNFGLSFPVLITPINEGLVVSEEKYEVHACEAEHSVTTFSYLFKEKEKPGTFYPEK 160 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK 197 + + + + ++ G I + ++ + D P + LEK Sbjct: 161 ASALGVPKGKLWHKLQ-QGEEITIENKSIKPSQVMGPNISGKKIGVSGDTR--PTKKLEK 217 Query: 198 -LQNLDFLIIDA-----LKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDYDMV- 249 +N D+LI D+ L+ S H + E+ + + KN ILTH + V Sbjct: 218 FFRNCDYLIFDSTFSDELREKAIQSCHSTAKEAAVFAKNADVKNLILTHFSARYKDEKVL 277 Query: 250 ---LKSTPSRVVPAFDGMQFSS 268 K+ + V+ A D ++ Sbjct: 278 LNEAKAIHNSVIAANDQLKIDV 299 >gi|302347992|ref|YP_003815630.1| Ribonuclease Z [Acidilobus saccharovorans 345-15] gi|302328404|gb|ADL18599.1| Ribonuclease Z [Acidilobus saccharovorans 345-15] Length = 293 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 24/124 (19%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M LG GA+L P R ++ + R + +++D+ Sbjct: 1 MARQVEVITLGTGAAL----------------PSLERF-TAAYVVR---DWAGNVILMDS 40 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMK 116 G ++ + + +D ++ TH H DHI+G+ GL G R + + A + Sbjct: 41 GEGAQQRLRQAGISPTKVDFIVLTHGHGDHINGLPGLLGTMQLSGRKSRLTIIAPKYLAE 100 Query: 117 HLFE 120 + E Sbjct: 101 PIRE 104 >gi|297585565|ref|YP_003701345.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297144022|gb|ADI00780.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 264 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 41/236 (17%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V++D G + M + + +DA+L +H H+DHI G L +K + Sbjct: 22 GEKRVLIDAGLSGKKIEAAMSRIGRSLSDVDALLISHEHSDHIKG-----AGVLARKYSL 76 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA + + + + + + + D+ + + + Sbjct: 77 PIYANEKTWLAMDGMLGKI--SPEQKFHFQRDERLAFGDLDIE-SFGVSHDAADPMFFSF 133 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 HG+ + TD ++ + LI ++ L+ G + Sbjct: 134 MHGK--------RKLTILTDTGYVSDRMAGMARSANKLIFESNHDTEMLRMGRYPWSVKR 185 Query: 216 ------SH-FSLSESLKKIELIN--PKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 H ++ + E+I P + L H+ +D + + + T + + +D Sbjct: 186 RILGDEGHVSNVDAGVALHEIIGEEPTDVYLAHLSLDNNMKDLARMTVEQTLQQYD 241 >gi|281356211|ref|ZP_06242704.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281317580|gb|EFB01601.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 262 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 87/266 (32%), Gaps = 38/266 (14%) Query: 26 GACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTH 83 G+C T P R +S + E + D G + + + A+ +H Sbjct: 7 GSCSGTEPMPGRDYTS----WILEENDGGLLWFDAGGGCASHAYAKGLSPLKVKALFLSH 62 Query: 84 PHADHIHGIDGLRGYFLKQK--------RPIDVYAA-PDCMKHLFESFRYCFKALDDRTY 134 PH DH G+ G+ K+K R + + + P+ + + A D+ + Sbjct: 63 PHLDHTAGLPGIFQAIRKEKWLRGDREFRELPCHTSAPEVIAAADVFLKADAAAGDEWDF 122 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAF 190 P+V + +P + G+ S FR ++ Y DV + Sbjct: 123 TPVVRELRPGELHRDGETAVEALPNRHMPPDPRSGKPRSYSFRLRFSPKHIVYTGDVGSL 182 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSSHFSLSE--SLKKIELINPKNAILTHMHVDL---- 244 + Q + L+ + H +E +L + + + +H L Sbjct: 183 DELAAWLEQPTELLMAET-------GHHRAAELCALVRARHWPVRRLLF--LHHGLEILR 233 Query: 245 ----DYDMVLKSTPSRVVPAFDGMQF 266 + + + V+ A DGM Sbjct: 234 DPAGEKAKADAAWGAGVLFASDGMTV 259 >gi|110667673|ref|YP_657484.1| mRNA 3'-end processing factor-like protein [Haloquadratum walsbyi DSM 16790] gi|109625420|emb|CAJ51844.1| mRNA 3'-end processing factor homolog [Haloquadratum walsbyi DSM 16790] Length = 639 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 29/163 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF------YMQV---LREQVLSIDAVLYTHPHADHI 89 R+S +S T +++D G Y+Q L S+DAV+ TH H DH Sbjct: 195 RASFVLSTP-----ETRILIDCGDKPGSDDVPYLQAPEALGSGASSVDAVVLTHAHLDHS 249 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDV 148 L K +Y + Y A + PP + +V E + Sbjct: 250 A----LLPLLFKYGYDGPIYTTEPTRDLMGLLQLDYLDVAAKEGRTPPYDSSMVRET--I 303 Query: 149 PICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVAY 183 + G + I + H LG F G+ Y Sbjct: 304 KHTIPLEYGDVTDIAPDVKLTFHNAGHILGSAVTHFHIGDGLY 346 >gi|190573037|ref|YP_001970882.1| hypothetical protein Smlt1005 [Stenotrophomonas maltophilia K279a] gi|190010959|emb|CAQ44568.1| conserved hypothetical protein, low similarity to metallo-beta lactamase [Stenotrophomonas maltophilia K279a] Length = 255 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 16/195 (8%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG---YFLKQK 103 V ER + +D G + A+ TH H DH+ G + L + +++ Sbjct: 24 VIERDGRPWLTIDCGGEGLTAFKAHYGHMPQALFVTHVHLDHVAGFERLFVDTFFSTQRR 83 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y + L + L + +I + G +E P Sbjct: 84 GKVRLYVPATVVPLLHKRIGDYPNVLAEGGANFWDAFQLIVVGEAFWH---EGVRLEVFP 140 Query: 164 ILQQHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLII-DALKNGLH--SSHFS 219 + H ++ G R G + + D P L + N + LI D GLH SH Sbjct: 141 VR-HHWPETAYGLRLQGALTWSGDTRPIPE-MLARFANDNELIAHDC---GLHGNPSHTG 195 Query: 220 LSE-SLKKIELINPK 233 + + + + + Sbjct: 196 VDDLEREYSAELQAR 210 >gi|329962790|ref|ZP_08300691.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328529445|gb|EGF56353.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 221 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 17/156 (10%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 E G+ I+D G ++ L ++ VL TH H DHI+G++ L+ + + + Sbjct: 21 EHGTKECWIIDVGDFDVIKSL-FDGYNLRGVLLTHVHYDHIYGLNELQADY----PDVPI 75 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS---AGGVIEAIPIL 165 Y K+L +++ + + I+ N V I + G + I Sbjct: 76 YTNEYGAKNL-------VSPIENLSSYHGEDFILSRTNGVKIIKEGNVILIGSYSLLVID 128 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFP-AESLEKLQN 200 S L F N + D + P + KLQN Sbjct: 129 TPGHDYSCLSFCVDNNLFTGD-SYIPGEKVFTKLQN 163 >gi|56965176|ref|YP_176908.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] gi|56911420|dbj|BAD65947.1| metal-dependent hydrolase [Bacillus clausii KSM-K16] Length = 285 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Query: 48 SERGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFL 100 ++ V++DTG ++ E ++ A+L TH H DH+ G L Sbjct: 48 DPTKAHGWVLIDTGMPGKSDMITEALIKQFGESNPPSAILLTHGHFDHVGGAFDLA---- 103 Query: 101 KQKRPIDVYAAPDCMKHLFESFRY 124 Q + +Y PD + ++ Y Sbjct: 104 -QNWDVPIYIHPDELPYVTGEKAY 126 >gi|323692672|ref|ZP_08106901.1| hypothetical protein HMPREF9475_01764 [Clostridium symbiosum WAL-14673] gi|323503226|gb|EGB19059.1| hypothetical protein HMPREF9475_01764 [Clostridium symbiosum WAL-14673] Length = 288 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++ + G + ++ E + +DAVL +H H DH+ G+ K Sbjct: 19 GEANILFEAGMAYAADLMIENIRRELGDGQVDAVLISHSHYDHVAGL----PAVRKAWPG 74 Query: 106 IDVYAAPDCMKHLFE 120 + VY + + L + Sbjct: 75 VKVYGSERAREILLK 89 >gi|42523665|ref|NP_969045.1| hydroxyacylglutathione hydrolase GloB [Bdellovibrio bacteriovorus HD100] gi|81617111|sp|Q6ML19|GLO2_BDEBA RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|39575872|emb|CAE80038.1| hydroxyacylglutathione hydrolase GloB [Bdellovibrio bacteriovorus HD100] Length = 251 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 11/62 (17%) Query: 59 DTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 D GP DF LR L + A+L TH H+DHI G+ L+ F VYA K Sbjct: 36 DAGPVIDF----LRANKLDLAAILLTHHHSDHIGGVGELKAAF-----DCPVYAPQKNQK 86 Query: 117 HL 118 + Sbjct: 87 QI 88 >gi|14590733|ref|NP_142803.1| hypothetical protein PH0874 [Pyrococcus horikoshii OT3] gi|3257285|dbj|BAA29968.1| 280aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 280 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 16/93 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S + ++ DT F M++L ID ++ +H H DH G+ Sbjct: 26 SFLVEV-----EGKKILFDTASYAEPILFNMKLLNLNPRDIDMIVLSHNHFDHTGGL--- 77 Query: 96 RGYFLKQKRPIDVYAAPDCMK---HLFESFRYC 125 G + R + ++A P+ K L F Y Sbjct: 78 LGILREINRKVPIFAHPEIFKVSFALEPEFMYA 110 >gi|293571154|ref|ZP_06682192.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|291608767|gb|EFF38051.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] Length = 559 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 50 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 103 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 163 FDQTAIPMYQTDYARLAE 180 >gi|293552924|ref|ZP_06673579.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|291602900|gb|EFF33097.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] Length = 559 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 50 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 103 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 163 FDQTAIPMYQTDYARLAE 180 >gi|294617806|ref|ZP_06697418.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|291595917|gb|EFF27198.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] Length = 559 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 50 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 103 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 163 FDQTAIPMYQTDYARLAE 180 >gi|262281855|ref|ZP_06059624.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus sp. 2_1_36FAA] gi|262262309|gb|EEY81006.1| metallo-beta-lactamase superfamily protein 1 [Streptococcus sp. 2_1_36FAA] Length = 560 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + VL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKGVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D + Y I ++ ++ I Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRDAKLYE-INQNTELKFKNLKATFFRTTHSIPEP 148 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 149 LGIVIHTPQGKIVCTGDFKFD 169 >gi|261208209|ref|ZP_05922882.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289566575|ref|ZP_06446996.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|294615817|ref|ZP_06695660.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|260077466|gb|EEW65184.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289161620|gb|EFD09499.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|291591307|gb|EFF22973.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] Length = 559 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 50 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 103 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 163 FDQTAIPMYQTDYARLAE 180 >gi|227552404|ref|ZP_03982453.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecium TX1330] gi|257888355|ref|ZP_05668008.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896755|ref|ZP_05676408.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|314940205|ref|ZP_07847378.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314941737|ref|ZP_07848616.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314947619|ref|ZP_07851028.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314950605|ref|ZP_07853685.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314992528|ref|ZP_07857949.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314995311|ref|ZP_07860420.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|227178458|gb|EEI59430.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecium TX1330] gi|257824409|gb|EEV51341.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257833320|gb|EEV59741.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|313590468|gb|EFR69313.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313592988|gb|EFR71833.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313597152|gb|EFR75997.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313599509|gb|EFR78352.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313640525|gb|EFS05105.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313645860|gb|EFS10440.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 562 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 53 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 105 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 106 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 165 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 166 FDQTAIPMYQTDYARLAE 183 >gi|255282415|ref|ZP_05346970.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] gi|255266999|gb|EET60204.1| metallo-beta-lactamase family protein [Bryantella formatexigens DSM 14469] Length = 555 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 18/84 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L++ + + + TH H DHI + Y Sbjct: 30 EDSIIVVDCGLSFPEDDMLGIDLVIPDVTYLKDNIDKVKGFVITHGHEDHIGAL----PY 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESF 122 +K+ + +YA M + F Sbjct: 86 VIKEIN-VPIYATKLTMGIIENKF 108 >gi|69245233|ref|ZP_00603311.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Enterococcus faecium DO] gi|257880118|ref|ZP_05659771.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882350|ref|ZP_05662003.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257885547|ref|ZP_05665200.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257891209|ref|ZP_05670862.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257894021|ref|ZP_05673674.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|257899791|ref|ZP_05679444.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|258614548|ref|ZP_05712318.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium DO] gi|260560273|ref|ZP_05832449.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|293378064|ref|ZP_06624240.1| conserved hypothetical protein [Enterococcus faecium PC4.1] gi|293560633|ref|ZP_06677120.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|293570173|ref|ZP_06681251.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|294623460|ref|ZP_06702312.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|68195908|gb|EAN10342.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Enterococcus faecium DO] gi|257814346|gb|EEV43104.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257818008|gb|EEV45336.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257821403|gb|EEV48533.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257827569|gb|EEV54195.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257830400|gb|EEV57007.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|257837703|gb|EEV62777.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|260073618|gb|EEW61944.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|291587322|gb|EFF19208.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291597133|gb|EFF28332.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291605384|gb|EFF34831.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|292643319|gb|EFF61453.1| conserved hypothetical protein [Enterococcus faecium PC4.1] Length = 559 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 14/138 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + + V TH HAD I + +L K + V+ ++ + Sbjct: 50 PDF--TYLEENIDRVAGVFLTHGHADAIGALP-----YLLSKISVPVFGTELTIELAKLN 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 A + + + I+ + + I I + + G I G F+ Sbjct: 103 VSRNEAAKGFKDFHVVDEHTEIDFGETVVSFFRTTHTIPDSVGINLKTKEGSIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAFPA 192 F A Y TD Sbjct: 163 FDQTAIPMYQTDYARLAE 180 >gi|308049063|ref|YP_003912629.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799] gi|307631253|gb|ADN75555.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799] Length = 468 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + V++D G L + IDAV+ +H H DH + L +++ Sbjct: 23 NGQRVLLDCGMHQGGELSKRLRRDTLPFKSRDIDAVVLSHAHLDHSGALPRL----MRRG 78 Query: 104 RPIDVYAAPDCMKHL 118 +Y + L Sbjct: 79 YRGPIYCTGATLNLL 93 >gi|302786496|ref|XP_002975019.1| hypothetical protein SELMODRAFT_102611 [Selaginella moellendorffii] gi|300157178|gb|EFJ23804.1| hypothetical protein SELMODRAFT_102611 [Selaginella moellendorffii] Length = 829 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 34/139 (24%) Query: 53 NTTVIVDTGPDFYMQVLREQV--------------LSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F V I+AV+ TH H DHI + + Sbjct: 56 DRYIMIDAGLMFPD-YEDFGVVKVLPDTTFISRWKHKIEAVIITHGHEDHIGAL----PW 110 Query: 99 FLKQKRP-IDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + P +Y+ ++ + Y F P + + Sbjct: 111 VIPALDPQTRIYSTSFTLELIKRRLKDYNF-------------PFEHRCHTFTMRNPFQA 157 Query: 157 GVIEAIPILQQHGRISSLG 175 G +A I H G Sbjct: 158 GPFKAEAIRVTHSIPDCCG 176 >gi|253569881|ref|ZP_04847290.1| ribonuclease Z [Bacteroides sp. 1_1_6] gi|251840262|gb|EES68344.1| ribonuclease Z [Bacteroides sp. 1_1_6] Length = 316 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ K L Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSP----KGL 96 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 E F + +T V E + + + IP+ RI GF F Sbjct: 97 EELFA-PLLSFFCKTLAYKVFFHEFETKEPTLIYDDRSVAVTTIPLRH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|123441270|ref|YP_001005257.1| putative hydroxyacylglutathione hydrolase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|160395514|sp|A1JKA9|GLO2_YERE8 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|122088231|emb|CAL11020.1| putative hydroxyacylglutathione hydrolase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 251 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 VIVD G + L + A+L TH H DH+ G+ LR + I V Sbjct: 19 DEQKHCVIVDPGESAPVLAALSQGQYLPQAILLTHHHNDHVGGVADLR----RHFPEIPV 74 Query: 109 YAAPDCMK 116 Y + Sbjct: 75 YGPQETAN 82 >gi|323483704|ref|ZP_08089085.1| hypothetical protein HMPREF9474_00834 [Clostridium symbiosum WAL-14163] gi|323402981|gb|EGA95298.1| hypothetical protein HMPREF9474_00834 [Clostridium symbiosum WAL-14163] Length = 288 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++ + G + ++ E + +DAVL +H H DH+ G+ K Sbjct: 19 GEANILFEAGMAYAADLMIENIRRELGDGQVDAVLISHSHYDHVAGL----PAVRKAWPG 74 Query: 106 IDVYAAPDCMKHLFE 120 + VY + + L + Sbjct: 75 VKVYGSERAREILLK 89 >gi|229018992|ref|ZP_04175834.1| Zn-dependent hydrolase [Bacillus cereus AH1273] gi|229025237|ref|ZP_04181659.1| Zn-dependent hydrolase [Bacillus cereus AH1272] gi|228736065|gb|EEL86638.1| Zn-dependent hydrolase [Bacillus cereus AH1272] gi|228742320|gb|EEL92478.1| Zn-dependent hydrolase [Bacillus cereus AH1273] Length = 556 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 27/127 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNV 181 L + V+ I++N D S G +IP S+G F G V Sbjct: 108 LGEAGMLGRVDLKTIDSNSTVDFNTTTVSFFGTTHSIP--------DSVGVCFHTSKGAV 159 Query: 182 AYCTDVN 188 Y D Sbjct: 160 VYTGDFK 166 >gi|331090639|ref|ZP_08339490.1| hypothetical protein HMPREF9477_00133 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401079|gb|EGG80674.1| hypothetical protein HMPREF9477_00133 [Lachnospiraceae bacterium 2_1_46FAA] Length = 207 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 9/70 (12%) Query: 47 VSERGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V + +++D + +L E++ ++ +L TH H DHI G+DGL F Sbjct: 18 VHNETTKEAILIDPGACSKNLKDYLLEEKL-NVKGILLTHGHFDHILGLDGLLQMF---- 72 Query: 104 RPIDVYAAPD 113 + VY + Sbjct: 73 -DVPVYVHEE 81 >gi|329666467|gb|AEB92415.1| hypothetical protein LJP_0076 [Lactobacillus johnsonii DPC 6026] Length = 240 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 54/233 (23%) Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 D QV + ID + +H H DH G+ G +++ I YA +L E Sbjct: 10 TKDLLAQV-GVDIKDIDMIFISHDHTDHSGGL----GVLMRRYPQISAYANSGTWNYLIE 64 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 S I N V + N + G ++ H + F Sbjct: 65 S-------------KKIGNLPVEQINTFESGVTKTFGDLDVTSFATSHDAAEPQYYVFSS 111 Query: 179 --GNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS-----------SHFS 219 A TD + ++++ D +++ L+NG +S H S Sbjct: 112 GGKRFACLTDTGYVSSNVKGEIKDADGYLMEFNYDDMMLRNGPYSWSLKHRIMSDVGHLS 171 Query: 220 LSESLK-KIELINP--KNAILTH---------MHVDLDYDMVL---KSTPSRV 257 ++ +++++P KN L H + + +D+++ + P+ V Sbjct: 172 NDQAADTLLDVVSPKTKNIFLAHRSQHNNTQYLAHETAHDLLVAGDANLPADV 224 >gi|328957269|ref|YP_004374655.1| ribonuclease J2 [Carnobacterium sp. 17-4] gi|328673593|gb|AEB29639.1| ribonuclease J2 [Carnobacterium sp. 17-4] Length = 559 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 24/146 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + AV TH H D I + + QK + V+ + L + Sbjct: 50 PDF--SYLEENKNRVTAVFLTHGHEDAIGALP-----YFLQKFDVPVFGTELTIA-LAKL 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + +++ N + G + A H S+G Sbjct: 102 F-----VEKDSQVSTFDDYHIVDEN-----TEIEFGDVVASFFRTSHTIPDSVGVALKTD 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDF 203 G++ Y D +S + + + Sbjct: 152 EGSIVYTGDFKF--DQSAKPMYQSNL 175 >gi|325568627|ref|ZP_08144920.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325157665|gb|EGC69821.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 560 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 16/160 (10%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + R ++ +DT PDF L E + V TH HAD I + YF Sbjct: 28 IFVLDCGVRYPENELLGIDTVIPDF--TYLEENADRVAGVFLTHGHADAIGAL----PYF 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L+ + + V+ ++ + + + I I+ I I Sbjct: 82 LENIQ-VPVFGTELTIELAKLTVNKNEATKRFKDFHVIDEHSEIDFGHATISFFRTTHSI 140 Query: 160 ---EAIPILQQHGRISSLG-FRFGNVA---YCTDVNAFPA 192 I + + G I G F+F A Y TD Sbjct: 141 PDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGRLAE 180 >gi|257877293|ref|ZP_05656946.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257811459|gb|EEV40279.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 560 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 16/160 (10%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + R ++ +DT PDF L E + V TH HAD I + YF Sbjct: 28 IFVLDCGVRYPENELLGIDTVIPDF--TYLEENADRVAGVFLTHGHADAIGAL----PYF 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L+ + + V+ ++ + + + I I+ I I Sbjct: 82 LENIQ-VPVFGTELTIELAKLTVNKNEATKRFKDFHVIDEHSEIDFGHATISFFRTTHSI 140 Query: 160 ---EAIPILQQHGRISSLG-FRFGNVA---YCTDVNAFPA 192 I + + G I G F+F A Y TD Sbjct: 141 PDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGRLAE 180 >gi|257867183|ref|ZP_05646836.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257873518|ref|ZP_05653171.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257801239|gb|EEV30169.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257807682|gb|EEV36504.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] Length = 560 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 16/160 (10%) Query: 42 LKISRVSERGSNTTVI-VDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + R ++ +DT PDF L E + V TH HAD I + YF Sbjct: 28 IFVLDCGVRYPENELLGIDTVIPDF--TYLEENADRVAGVFLTHGHADAIGAL----PYF 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L+ + + V+ ++ + + + I I+ I I Sbjct: 82 LENIQ-VPVFGTELTIELAKLTVNKNEATKRFKDFHVIDEHSEIDFGHATISFFRTTHSI 140 Query: 160 ---EAIPILQQHGRISSLG-FRFGNVA---YCTDVNAFPA 192 I + + G I G F+F A Y TD Sbjct: 141 PDSVGISVKTEAGNIVYTGDFKFDQTAIPMYQTDFGRLAE 180 >gi|284031136|ref|YP_003381067.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283810429|gb|ADB32268.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 561 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 48/130 (36%), Gaps = 25/130 (19%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + G + ++ D G +R+++ I+A++ TH H DHI G+ Y Sbjct: 48 CGVLFPEEHQPGVDV-ILPDFG------WIRDRLDKIEAIVLTHGHEDHIGGV----PYL 96 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK++ I V + + + + + P+ +E + + G Sbjct: 97 LKERGDIPVVGSKLTLAFITSKLK-----------EHRLKPVTVEVKEGD---RQQLGPF 142 Query: 160 EAIPILQQHG 169 E + H Sbjct: 143 ECEFLAVNHS 152 >gi|149180045|ref|ZP_01858550.1| Zn-dependent hydrolase [Bacillus sp. SG-1] gi|148852237|gb|EDL66382.1| Zn-dependent hydrolase [Bacillus sp. SG-1] Length = 556 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 VI+D G F + L E + A+L TH H DHI G+ Sbjct: 29 GEDIVIIDCGGKFPDETLMGIDLIIPDISYLEENADKVKALLITHGHEDHIGGVP----- 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L +K + VYA + + L++ + I+ N + G Sbjct: 84 YLLKKLNVPVYATNFTLGLIELK-------LEEHKLRRETTLVPIDANS-----TADFGQ 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I+ H LG F G V + D Sbjct: 132 IKTSFFNVTHSIPDCLGIVFDTPEGTVVHTGDFK 165 >gi|110004336|emb|CAK98674.1| conserved hypothetical upf0036 protein [Spiroplasma citri] Length = 586 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 11/116 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYCFK 127 L+E I A+ TH H DHI GI +L ++ I +YA + + + K Sbjct: 88 LKENQRKIKALFITHGHEDHIGGIP-----YLLREVNIPIIYAPRLAAALIRDRLKEA-K 141 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFG 179 + N VI+ + I + I I ++ +G++ S G ++F Sbjct: 142 LEQTTIVKEVDNMSVIKTKNFKINFFAVNHSIPDAFGISVVTPNGKVVSTGDYKFD 197 >gi|319408594|emb|CBI82249.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 558 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 50/217 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + ++ ++ TH H DH + L K Sbjct: 44 VSFAGPELPGANLIL---PDIR--FLENEKHNVRGLVLTHAHEDHYGAVLDLWP-----K 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y +P L R FK I N G Sbjct: 94 LQVPLYCSPFTAGLLESKKRSNFK------------FHKIPLNIFQAGDCFQIGPFTIEA 141 Query: 164 ILQQH--------------GRISSLG-FRFG---NVAYCTDVNAFPAESLEKL--QNLDF 203 I H G + G ++ ++ TD + L L + + Sbjct: 142 IAVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPVTD-----EKRLRILGNKGILA 196 Query: 204 LIID---ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 L+ D AL++G+ S + +SL +I L ++ Sbjct: 197 LVCDSTNALQDGISPSEQQVRDSLSEIILKAEGRVVI 233 >gi|251799822|ref|YP_003014553.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247547448|gb|ACT04467.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 559 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 30/137 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N +++D G F + L E + A+L TH H DHI G+ Sbjct: 31 ANDIIVIDCGSKFPDEELLGIDIIVPDITYLIENKDKVRALLITHGHEDHIGGLP----- 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ ++ + VYA+ M + L + +I ++ + G Sbjct: 86 YILKQLSMPVYASRLTMGLIE-------GKLKEAGLLGSTERHLIHSDS-----ELKLGS 133 Query: 159 IEAIPILQQHGRISSLG 175 ++A H SLG Sbjct: 134 MKASFFKTNHSIPDSLG 150 >gi|147676902|ref|YP_001211117.1| hydrolase [Pelotomaculum thermopropionicum SI] gi|146272999|dbj|BAF58748.1| predicted hydrolase [Pelotomaculum thermopropionicum SI] Length = 302 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 83/226 (36%), Gaps = 31/226 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + ++VD G + + + +V ID ++ THPH DHI +D Sbjct: 64 SILVQFP----NGRNMLVDAGKNDSASTVISYLKKNRVKKIDYLVGTHPHEDHIGSLD-- 117 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY---PPIVNPIVIENNDVPICM 152 +K +++ ESFR A+ ++ ++E+ ++ + Sbjct: 118 --AVIKSFEIGEIFMPKAVTGT--ESFRDVLAAVKNKGLQIKTAKAGVSILEDGNLFAKI 173 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYC--TDVNAFPAESLEKLQNLDFLIIDALK 210 + G E + I +G+VA+ D + + D LK Sbjct: 174 IAPCGP-EYEGLNNYSAVIKVE---YGDVAFLLAGDAEELSEKEI-LAGGADV-KAQVLK 227 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 G H SH S S + ++ + PK A+++ + + L Sbjct: 228 VGHHGSHSSTST--EFLKAVAPKYAVISAGAGNDYHHPHQVTLDKL 271 >gi|152978857|ref|YP_001344486.1| hydroxyacylglutathione hydrolase [Actinobacillus succinogenes 130Z] gi|189041216|sp|A6VNK4|GLO2_ACTSZ RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|150840580|gb|ABR74551.1| Hydroxyacylglutathione hydrolase [Actinobacillus succinogenes 130Z] Length = 233 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 LRE +++AVL TH H DH+ G+ + YF + VY +C Sbjct: 38 LRENKFAVEAVLLTHKHDDHVGGVAAFKRYF----PDVPVYGPQECAD 81 >gi|312865669|ref|ZP_07725893.1| ribonuclease J 1 [Streptococcus downei F0415] gi|311098790|gb|EFQ57010.1| ribonuclease J 1 [Streptococcus downei F0415] Length = 563 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 23/141 (16%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V I A++ TH H DHI GI FL + Sbjct: 36 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRIKALVITHGHEDHIGGIP-----FLLK 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + D Y I + + ++ + I Sbjct: 91 QANIPIYAGPLALALIRGKLEEHGLLRDATLYE-INDNTELTFKNLSVTFFRTTHSIPEP 149 Query: 163 PILQQH---GRISSLG-FRFG 179 + H G+I G F+F Sbjct: 150 LGIVIHTPQGKIVCTGDFKFD 170 >gi|304408061|ref|ZP_07389711.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] gi|304343080|gb|EFM08924.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] Length = 560 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +IVD G F + L E + ++ TH H DHI GI Y Sbjct: 29 DDDIIIVDCGSKFPDESLLGIDLIVPDIAYLLENKEKVRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +KQ + +YA+ + + L + I+ + + G Sbjct: 85 IIKQFN-MPIYASRLTLGLIK-------GKLKEHRLLGTTALHQIDADSKVVL-----GS 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F G V + D Sbjct: 132 IPLSFFTTSHSIPDCLGIAFHTPQGTVVHTGDFK 165 >gi|302190748|ref|ZP_07267002.1| hypothetical protein LineA_01905 [Lactobacillus iners AB-1] gi|309804837|ref|ZP_07698899.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 09V1-c] gi|312873303|ref|ZP_07733358.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2052A-d] gi|325913657|ref|ZP_08176019.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 60-B] gi|329919739|ref|ZP_08276690.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 1401G] gi|308165776|gb|EFO67997.1| metallo-beta-lactamase domain protein [Lactobacillus iners LactinV 09V1-c] gi|311091183|gb|EFQ49572.1| metallo-beta-lactamase domain protein [Lactobacillus iners LEAF 2052A-d] gi|325477016|gb|EGC80166.1| metallo-beta-lactamase domain protein [Lactobacillus iners UPII 60-B] gi|328937086|gb|EGG33514.1| metallo-beta-lactamase domain protein [Lactobacillus iners SPIN 1401G] Length = 265 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V++D G +L ++ + ID V +H H DH G+ G +++ Sbjct: 18 ESEHHKVLLDAGLSGKKIANLLAQRGVDIKDIDMVFLSHDHTDHSGGL----GVLMRRYS 73 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 ++ YA K+L ES + K + +N E + ++ Sbjct: 74 QLNAYANEGTWKYLQESNK-IGKIPKE-----QINIFAPETTKIFDDLEVHSFATSHDAA 127 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID------ALKNGLHS--- 215 Q+ S G RF A TD + +++ D +++ L+NG +S Sbjct: 128 EPQYYVFCSGGKRF---ACLTDTGYVSSSVKMQIEAADAYLMEFNYDDMMLRNGPYSWSL 184 Query: 216 --------SHFSLSESLKKIELINPKNA---ILTHMH-VDLDYDMVLKS 252 H S ++++ + + + L H+ + D +V KS Sbjct: 185 KQRILSDVGHLSNEQAVEALGDVVSRETKYIFLAHISQHNNDQLLVKKS 233 >gi|296129377|ref|YP_003636627.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena DSM 20109] gi|296021192|gb|ADG74428.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena DSM 20109] Length = 561 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 39/143 (27%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 + +++D G PDF +R+++ IDA++ TH H DHI + Sbjct: 38 EHAGRLLVIDCGVLFPEDHQPGVDLILPDF--DYIRDRLDDIDAIVLTHGHEDHIGAV-- 93 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI--CM 152 Y L+ +R I + + + + + I +P+ Sbjct: 94 --PYLLRLRRDIPLVGSQLTLAFVEAK----------------LKEHRIAPLTLPVREGQ 135 Query: 153 KSAGGVIEAIPILQQHGRISSLG 175 G E + H +L Sbjct: 136 VEQLGPFECEFVAVNHSIPDALA 158 >gi|256379805|ref|YP_003103465.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] gi|255924108|gb|ACU39619.1| beta-lactamase domain protein [Actinosynnema mirum DSM 43827] Length = 559 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ I+A++ TH H DHI + + LK + + V + + L Sbjct: 62 PDFR--AIEDRLDDIEAIVLTHGHEDHIGAV----PFLLKLRPDLPVVGSRFTLALLAA- 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P ++ + E D G E H +L Sbjct: 115 -----KCREHRQNPKLIEVVEGERRDA--------GPFELEFFAVNHSIPDALA 155 >gi|150400487|ref|YP_001324253.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013190|gb|ABR55641.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 635 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 56/181 (30%), Gaps = 30/181 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + +++D G + M R V IDAV+ TH H DH + Sbjct: 201 PESRILIDCGINVAMDGDRAFPHFDAPEFAVEEIDAVVVTHAHLDHCG----FVPGLFRY 256 Query: 103 KRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + + Y A + P + I+ I G + Sbjct: 257 GYDGPIYCSKPTRDLMTLLQKDYIDIAEKEGKVVPY-SSKDIKKCVKHIIPIDYGVTTDV 315 Query: 162 IPILQ--QHGRISSLGFRFG---------NVAYCTDV----NAFPAESLEKLQNLDFLII 206 P ++ H LG N+AY D+ + ++ L+ LII Sbjct: 316 APAIKLTMHNAGHILGSAIAHCHIGDGLYNIAYTGDIKFEASRLLEPAVCNFPRLETLII 375 Query: 207 D 207 + Sbjct: 376 E 376 >gi|224282521|ref|ZP_03645843.1| hypothetical protein BbifN4_01710 [Bifidobacterium bifidum NCIMB 41171] gi|310286982|ref|YP_003938240.1| hypothetical protein with metallo-beta-lactamase domain [Bifidobacterium bifidum S17] gi|311063858|ref|YP_003970583.1| metal-dependent hydrolase [Bifidobacterium bifidum PRL2010] gi|313139673|ref|ZP_07801866.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|309250918|gb|ADO52666.1| Conserved hypothetical protein with metallo-beta-lactamase domain [Bifidobacterium bifidum S17] gi|310866177|gb|ADP35546.1| Metal-dependent hydrolase [Bifidobacterium bifidum PRL2010] gi|313132183|gb|EFR49800.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 613 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 85 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 138 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + K + +P +V +V K G Sbjct: 139 KLRPDIPLIGSKLTLAFVEA------KCQEHNQHPTMV--------EVKGRDKLKVGPFN 184 Query: 161 AIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLEK--------------LQNLDFLI 205 + H +L A D + L Q +D L+ Sbjct: 185 LEFVTVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHKITDLVEFGKIGEQGVDLLM 244 Query: 206 ID 207 +D Sbjct: 245 MD 246 >gi|219128782|ref|XP_002184584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404034|gb|EEC43983.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 284 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 14/137 (10%) Query: 53 NTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYF-----LKQKR 104 T + D G +Q+ + + I + TH H DH G+ GL + Sbjct: 6 GGTWLFDVGECTQLQIQKTSSIKPSKITKIFLTHAHGDHSFGLPGLLCLMGQDRDRENSP 65 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P+++Y L + RY + YP +P+ + P+ ++ Sbjct: 66 PVEIYGPEGLRMWLRVAIRY---SGGRNIYPQYDHPLCADG--APMWEIEDEEDVKVYAA 120 Query: 165 LQQHGRISSLGFRFGNV 181 HG I LG+ + Sbjct: 121 PMSHG-IPCLGYVVDEL 136 >gi|257068897|ref|YP_003155152.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810] gi|256559715|gb|ACU85562.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810] Length = 787 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 42 LKISRVSERGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHG 91 + + V++DTGPD + R Q+ ID ++ THPH DH G Sbjct: 542 VLLRARPSDRDAPIVLLDTGPDPEALRQCLDRLQIPRIDLLVLTHPHQDHTGG 594 >gi|297194450|ref|ZP_06911848.1| ribonuclease Z [Streptomyces pristinaespiralis ATCC 25486] gi|197718741|gb|EDY62649.1| ribonuclease Z [Streptomyces pristinaespiralis ATCC 25486] Length = 302 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 87/330 (26%), Gaps = 92/330 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R ++ D Sbjct: 1 MSVR-ELVVLGT--ASQVP-----------TRHRNHNG--------YLLRWDGEGLLFDP 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHG--------------------------- 91 G Q+LR V I+ + TH H DH G Sbjct: 39 GEGTQRQMLRAGVSAHDINRICVTHFHGDHSLGVAGVIQRINLDQVPHPVSAHYPASGQR 98 Query: 92 -IDGLRGYFLKQK----RPIDVYAAPDCMK------------HLFESFRYCFKALDDRT- 133 D LR ++ + + V A + H ES+ Y D R Sbjct: 99 FFDRLRYATAYRETVKLKEVPVAADGLVARTGGYTLHAHRLSHPVESYGYRLVEPDGRRM 158 Query: 134 YPPIVNPIVIENNDV-PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 P + I+ DV + + G + + + R A+ D Sbjct: 159 LPEKLAAYGIKGPDVGRLQREGELGGVTLDDVSEVR--------RGQRFAFVMDT-RLCD 209 Query: 193 ESLEKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV---- 242 + D L+I++ + H + ++ ++ +LTH Sbjct: 210 GVHVLAEGCDMLVIESTFLDEDGRLAAEHGHLTAGQAGLVAHRGGVRHLVLTHFSQRYTD 269 Query: 243 ---DLDYDMVLKSTPSRVVPAFDGMQFSSP 269 + + V A D + P Sbjct: 270 AAAEFERQARAAGFDGEVTVARDLWRIPVP 299 >gi|161899375|ref|XP_001712914.1| regulator of transcription that contains myb domains [Bigelowiella natans] gi|75756408|gb|ABA27302.1| regulator of transcription that contains myb domains [Bigelowiella natans] Length = 636 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 37/141 (26%), Gaps = 38/141 (26%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PD L I+ ++ TH H DHI I+ + Sbjct: 98 ILIDCGIMFTDLSHLGIQKVIPDI--NFLTHIQNLIEGLIITHGHEDHIGAINWVLPILR 155 Query: 101 KQKRPIDVYAAPDCMKHLFESFR---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 VY + + + Y FK L + + G Sbjct: 156 TDAL---VYTSRFVYNIISKRIDKQNYLFKKL---------------FRIFDLKKRFQLG 197 Query: 158 VIEAIPILQQHGRISSLGFRF 178 E H GF Sbjct: 198 PFECEAFRVTHSIPDCCGFVI 218 >gi|325830577|ref|ZP_08163998.1| metallo-beta-lactamase domain protein [Eggerthella sp. HGA1] gi|325487323|gb|EGC89765.1| metallo-beta-lactamase domain protein [Eggerthella sp. HGA1] Length = 267 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 54/261 (20%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V + + V+VD G R +++AVL TH H DH + + K Sbjct: 21 VEDTATGKGVLVDCGICKRDFFARCDEAGFDPANLEAVLITHDHTDHTKSLGVVLRGLAK 80 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 V+A + + + + D + AG + A Sbjct: 81 LGIEPAVFADDAVRAA----------SKEIIVLEGACDLRAFSSGD---ALSLAGMQVHA 127 Query: 162 IPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKN 211 H SS GFR V + TD E+ E L+++ L +++ LK+ Sbjct: 128 --FRTSHDAASSCGFRVEADGDAVGFMTDTGIVTGEADEALRDVRILALESNHDVQMLKD 185 Query: 212 GLHS-----------SHFSLSESLKKIELI---NPKNAILTHMH-----VDLDYDMV--- 249 G + H S ++ ++E++ + + H+ L + + Sbjct: 186 GPYPYPVKRRVGSDTGHLSNVQAADELEVLLSDALEQVVAMHISQNNNTYRLPGEALTAV 245 Query: 250 --LKSTPSRVVPAFDGMQFSS 268 P+ V A+ M S+ Sbjct: 246 VRRAGHPATVQVAYQTMLVSA 266 >gi|320459067|dbj|BAJ69688.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 88 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 141 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + + + V P +E +V + A Sbjct: 142 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 201 Query: 157 GVIEAIP 163 V P Sbjct: 202 AVYVKTP 208 >gi|311280565|ref|YP_003942796.1| beta-lactamase domain-containing protein [Enterobacter cloacae SCF1] gi|308749760|gb|ADO49512.1| beta-lactamase domain-containing protein [Enterobacter cloacae SCF1] Length = 281 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 18/152 (11%) Query: 42 LKISRVSERGSNTTVIVDTGPD--------FYMQVLREQVL--SIDAVLYTHPHADHIHG 91 + I+ RG T++VDTG ++ V +D VL TH H DHI G Sbjct: 54 IHINCYLIRGRGRTILVDTGTGGQSEAGGQLKANLVAAGVRPDDVDTVLLTHGHPDHIGG 113 Query: 92 IDGLRGYFLKQKRPIDVYA--APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + G + + + ++ A + A + Y ++ ++ Sbjct: 114 LLDAEGRPVYEHAELHLHTLEAEYWWDDEKQRM-----ASERGKYNFMLARRTLDAYAQS 168 Query: 150 ICMKSAGGVIE-AIPILQQHGRISSLGFRFGN 180 + S V E +P+ GFR G+ Sbjct: 169 VRFFSGNEVTEGILPVWLPGHTPGHTGFRVGS 200 >gi|299471871|emb|CBN77041.1| conserved unknown protein [Ectocarpus siliculosus] Length = 987 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 11/95 (11%) Query: 180 NVAYCTDVNAFPAESL-EKLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINP 232 + Y D P+ESL + + LI +A + H ++ E++ + + Sbjct: 853 KLVYSGDCR--PSESLVREGKGAAVLIHEATFDETKQQEAFDKRHCTMQEAMAVGQRMGA 910 Query: 233 KNAILTHMHVDLDY--DMVLKSTPSRVVPAFDGMQ 265 + ILTH + + ++V AFD M+ Sbjct: 911 ERVILTHFSQRYPHMPSSLAGGLGTKVCLAFDNMR 945 Score = 35.9 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 4/27 (14%) Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGI 92 Q+LR + AV +HPHADH G+ Sbjct: 650 HQMLRN----LSAVWISHPHADHHLGL 672 >gi|307129714|ref|YP_003881730.1| metal-dependent hydrolases of the beta-lactamase superfamily III [Dickeya dadantii 3937] gi|306527243|gb|ADM97173.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Dickeya dadantii 3937] Length = 255 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 66/241 (27%), Gaps = 49/241 (20%) Query: 5 YHFTILGCG---ASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 ILG G S R +++++S ++VD G Sbjct: 1 MELEILGSGEAYDSQ--------------------RVNAAIRVSE-----GGFQLLVDCG 35 Query: 62 PDFYMQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVYAAPDCMK 116 P Q L + I A+ TH H DH G+ + + P+ + A + Sbjct: 36 PTV-PQALWQRQTAPDDIHAIYITHAHPDHALGLTTWLNWCESCGRTAPLAIIAPRQQLP 94 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG---RISS 173 L + F + +N E+ + G +H R Sbjct: 95 PLQRLADFAFWPAGRPLFA--LNWQDSESLNE-------LGPWRCQTAPTRHSVPNRSLW 145 Query: 174 LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIELIN 231 L G++ Y D L D +++ + H + + Sbjct: 146 LDGEQGSLFYSGD-GQLTPAGAALLAQSDLALVECFSPQAADNAYHGNWPQVRTLTRKPG 204 Query: 232 P 232 Sbjct: 205 A 205 >gi|118577037|ref|YP_876780.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Cenarchaeum symbiosum A] gi|189043780|sp|A0RYQ9|RNZ_CENSY RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|118195558|gb|ABK78476.1| metal-dependent hydrolase of the beta-lactamase superfamily III [Cenarchaeum symbiosum A] Length = 298 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 38/179 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A+ R + LK+ ++ D G Sbjct: 1 MKLVFLGTSAAQPTTRRGLSC--------------TCLKVE-------GEILMFDAGEGM 39 Query: 65 YMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDCMKHLF 119 + LR ++ + TH H DH G+ GL + +R +++Y P + + Sbjct: 40 QVPYLRSKLGWNKKMRIFITHLHGDHCLGLLGLLQ-TMSMQRRTESVEIYGPPGTDEFVA 98 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + R + P P+++E + + + G + A +H + + +RF Sbjct: 99 ANARML-------GFSPSF-PVIMETTEEGTVVDAPGYEVSA--CRAEHS-VEAFSYRF 146 >gi|18310579|ref|NP_562513.1| hypothetical protein CPE1597 [Clostridium perfringens str. 13] gi|18145260|dbj|BAB81303.1| hypothetical protein [Clostridium perfringens str. 13] Length = 287 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|320547178|ref|ZP_08041472.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] gi|320448165|gb|EFW88914.1| metallo-beta-lactamase [Streptococcus equinus ATCC 9812] Length = 213 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 16/81 (19%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGI 92 R + L + +IVD G D ++E++ S+D A+L TH H DHI G+ Sbjct: 12 RENTYLLV------NDQAIIIVDPGSDTDK--IKEKIQSLDKPVAAILLTHAHYDHIMGL 63 Query: 93 DGLRGYFLKQKRPIDVYAAPD 113 D +R F P VY + Sbjct: 64 DVIRDAF---GHP-PVYISEK 80 >gi|289771696|ref|ZP_06531074.1| integral membrane protein [Streptomyces lividans TK24] gi|289701895|gb|EFD69324.1| integral membrane protein [Streptomyces lividans TK24] Length = 392 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VDTGPD LR + + VL TH HADH+ G+ Sbjct: 154 GEGTGVVVDTGPDPTLVDHCLRALGITRVPLVLLTHFHADHVAGL 198 >gi|193875754|gb|ACF24513.1| myb domain containing transcription regulator [Gymnochlora stellata] Length = 552 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 32/152 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N +I+D G F +L +++++ TH H DHI + + Sbjct: 16 NNKFIIIDAGIMFTEFTKYGIKKIVPDINLLSYFKDRVESLIITHGHEDHIGALSWIIPI 75 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 F + + +Y + + + + Y + G Sbjct: 76 F---ENRLPIYVSGFVYNLITQRIS---SSDRKNEY---------NLKRFSLKKMFQAGP 120 Query: 159 IEAIPILQQHGRISSLGF----RFGNVAYCTD 186 + H G FGNV + D Sbjct: 121 FHCVAFRVTHSIPDCCGLFIKTSFGNVLHTGD 152 >gi|330446617|ref|ZP_08310269.1| metallo-beta-lactamase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490808|dbj|GAA04766.1| metallo-beta-lactamase superfamily protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 458 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 52 SNTTVIVDTGPD-----FYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++++D G + Q+ + + I+A+L TH H DHI I + L Sbjct: 22 GKSSLLIDCGLFQGAEAKHQQLNIEFDIKHIEALLVTHSHIDHIGRI----PWLLAAGFS 77 Query: 106 IDVYAAPDCMKHL 118 +YA L Sbjct: 78 GPIYATEATAALL 90 >gi|167967228|ref|ZP_02549505.1| hypothetical protein MtubH3_03992 [Mycobacterium tuberculosis H37Ra] Length = 332 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 31 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 86 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 87 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 146 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 147 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 205 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 206 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 264 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 265 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 298 >gi|86608223|ref|YP_476985.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556765|gb|ABD01722.1| metallo-beta-lactamase family protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 595 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 68/204 (33%), Gaps = 29/204 (14%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D G + + DAV+ +H H DH+ G+ F ++ + +YA Sbjct: 29 GSHRLLLDCGLPAPA-LFKALPGIPDAVICSHAHFDHVQGL----PAFHRRYPQVPLYAT 83 Query: 112 PDCMKHLFESFRYCFKALD---DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP----- 163 P HL C D +PP + ++ + +P Sbjct: 84 PVT-AHLAAGLWECGVWPGYDRDIRFPPFRALPLGRAREILPHLMLTFFAAGHLPGAAAT 142 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVN-----AFPAESLEKLQ--NLDFLIIDA-LKNGLHS 215 +LQ + Y D + P L L+ D L+I+A L + H Sbjct: 143 LLQNTQTTPA-----QACVYTGDCSLASTRFAPGLDLIALRHWQPDVLLIEASLGSTRHP 197 Query: 216 SHFSLSESL--KKIELINPKNAIL 237 L L + + + +L Sbjct: 198 PRRHLENRLVERLLSALEAGQTVL 221 >gi|307265066|ref|ZP_07546626.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919864|gb|EFN50078.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter wiegelii Rt8.B1] Length = 829 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 28/166 (16%) Query: 52 SNTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G PDF +++E +DA++ +H H DH + + Sbjct: 22 EGKNILLDCGIRMSSTKDNLPDFR--LIQEH-GGVDAIIVSHAHLDHTGAL----PIISR 74 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y K ++ + PI +++ + G Sbjct: 75 MYPQAKIYMTHATKDLTRVLLYDSLKIMERESEIPIYAENHVKDMLDRALCYTPGYTFTP 134 Query: 162 IPILQQHGRISSLGFRFGNVA-----------YCTDVNAFPAESLE 196 P Q + G G + Y D + F ++E Sbjct: 135 FPDSQIKVTLYPAGHILGAASVYITSEEGSVFYSGDFSGFRQNTIE 180 >gi|224417854|ref|ZP_03655860.1| hypothetical protein HcanM9_01123 [Helicobacter canadensis MIT 98-5491] gi|253827193|ref|ZP_04870078.1| putative hydrolase [Helicobacter canadensis MIT 98-5491] gi|313141397|ref|ZP_07803590.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510599|gb|EES89258.1| putative hydrolase [Helicobacter canadensis MIT 98-5491] gi|313130428|gb|EFR48045.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 659 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 66/192 (34%), Gaps = 32/192 (16%) Query: 53 NTTVIVDTGPDFYMQVLREQVL--------------SIDAVLYTHPHADHIHGIDGLRGY 98 N+ +I+D G F + V I ++ TH H DHI + Sbjct: 133 NSAIIIDAGMSFPDSDM-HGVDILVPDFSYLEVIKDKIAGIVITHAHEDHIGAMP----- 186 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSA 155 +L +K +Y + + F + P+ I + I + + Sbjct: 187 YLFKKYQFPIYGTALPLGLIGSKFDEHGLKKFRSLFRPVEKRKPIRIGEFEIEWIHITHS 246 Query: 156 GGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 A+ I + G I G F+ + Y TD+N + Q + L+ D+ Sbjct: 247 IVDSSALAIKTEAGVIFHTGDFKIDHTPIDGYPTDLNRI---AYYGEQGVLLLLSDS--T 301 Query: 212 GLHSSHFSLSES 223 H S ++ SE+ Sbjct: 302 NSHKSGYTPSEA 313 >gi|161529284|ref|YP_001583110.1| ribonuclease Z [Nitrosopumilus maritimus SCM1] gi|254808651|sp|A9A3X2|RNZ_NITMS RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|160340585|gb|ABX13672.1| ribonuclease Z [Nitrosopumilus maritimus SCM1] Length = 299 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 84/323 (26%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A+ P R S + + R E ++ D G Sbjct: 1 MKLVFLGTSAAQ----------------PTENRGLSCICLEREGE-----VLMFDAGEAA 39 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKRP---IDVYAAPDCMKHLF 119 + ++ + + TH H DH GI GL + + ++++ + + Sbjct: 40 QISYMKSGLGWNKKMKIFVTHLHGDHCVGILGLLQ-TMSMQNRTESLEIFGPSGIEEFIA 98 Query: 120 E-----------------------------------------SFRYCFKALDDRTYPPIV 138 +F Y F+ D + Sbjct: 99 ANIKVLNFGLSFPILINTIKDEKIFEDEKFLIRTCKANHSIIAFSYLFEEKDKPGRFNVE 158 Query: 139 NPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR--FGNVAYCTDVNAFPAESLE 196 + + + K G E + LG R + D P + LE Sbjct: 159 KAKELGIPEGELWNKLQNGN-EITVNEKIIKPEQVLGERRPGKKIGISGDT--MPTKELE 215 Query: 197 -KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHV----DLD 245 + D+L+ D+ + + H + ++ + KN +LTH +++ Sbjct: 216 EFFEECDYLVFDSTFLEAEKQKAQDTCHSTAKQAATVAKNAKVKNLVLTHFSARYRDEVE 275 Query: 246 YDMVLKSTPSRVVPAFDGMQFSS 268 + K V+ A D ++ Sbjct: 276 HLREAKEIHDSVITAKDLLEIEI 298 >gi|312139354|ref|YP_004006690.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi 103S] gi|325672766|ref|ZP_08152462.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi ATCC 33707] gi|311888693|emb|CBH48005.1| secreted metallo-beta-lactamase superfamily protein [Rhodococcus equi 103S] gi|325556643|gb|EGD26309.1| metallo-beta-lactamase superfamily protein [Rhodococcus equi ATCC 33707] Length = 639 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ ++A++ TH H DHI + + L+ ++ I + A + + Sbjct: 141 PDFRY--IEDRMDDVEAIILTHGHEDHIGAV----PFLLRLRQDIPIVGAKFTLALVAA- 193 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + P ++E + G E H Sbjct: 194 ----------KCREHRLRPNLVEVVEGDKTTH---GPFECEYFAVNHS 228 >gi|269837378|ref|YP_003319606.1| Ribonuclease Z [Sphaerobacter thermophilus DSM 20745] gi|269786641|gb|ACZ38784.1| Ribonuclease Z [Sphaerobacter thermophilus DSM 20745] Length = 304 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 78/295 (26%), Gaps = 95/295 (32%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--FYM 66 +LG G + +P NR + L R ++ D G Sbjct: 6 LLGTGGMMPLP---------------NRWLSALLL------RCEGHIILCDCGEGTQISW 44 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFESFRY 124 + + ++ TH HADH+ G+ G+ +R P+ +Y P + Sbjct: 45 RSTNWGFRDLGTIVLTHLHADHVAGLPGVLYTVAHAEREDPVAIYGPPGTAAAVAAM--- 101 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 P + P+ + + G ++ + +H R+ L + F Sbjct: 102 ------RVIVPRLPFPVEVHELTGGETVDLPAG-LQLRALAVEH-RVPCLAYTFHRPRAP 153 Query: 181 -----------------------------------------------VAYCTDVNAFPAE 193 VA+ TD P Sbjct: 154 RFDTDRARELGIPITLWSRLQRGESVTVDGRPIQPEEVLGPPRRGLTVAFVTDTRPTPEL 213 Query: 194 SLEKLQNLDFLII-------DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 + ++ D L+ D L + H E+ K LTH Sbjct: 214 P-DFVRGADLLVCEGMYGDPDMLDRAVERGHMIFQEAAAIAAAGEVKRLWLTHFS 267 >gi|118401682|ref|XP_001033161.1| Ulp1 protease family, C-terminal catalytic domain [Tetrahymena thermophila] gi|89287508|gb|EAR85498.1| Ulp1 protease family, C-terminal catalytic domain [Tetrahymena thermophila SB210] Length = 1042 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 29/157 (18%) Query: 53 NTTVIVDTGPDFYMQVLRE-QVLS--IDAVLYTHPHADHIHG-----IDGLRGYFLKQKR 104 ++VD P F Q L++ + S I ++ TH HADH G +D R + Sbjct: 344 GKGIMVD-PPPFSSQFLKKMGIPSVLIHGIIITHCHADHDAGTFTKLLDDSRVEVI---- 398 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + SF + AL + + + + + G Sbjct: 399 ---------TTRTIMNSFLRKYSALSGMGIEELKHLFIFRPVTLGTSINIYGANFRF--F 447 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEK 197 H I +GF ++ Y D P + E Sbjct: 448 YAFH-TIPCIGFECELKQRSIYYSADTFYNPEQLKEF 483 >gi|15805685|ref|NP_294381.1| hypothetical protein DR_0658 [Deinococcus radiodurans R1] gi|6458361|gb|AAF10237.1|AE001923_4 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 364 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 11/104 (10%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR------EQVLSIDAVLYTHPH 85 P R R L + V+VDTG ++R + A++ TH H Sbjct: 73 RPDVFRVRLPLVNIFLMGVPGGDWVLVDTGMPGTAGLIRQAAAQVYGARAPQAIVLTHGH 132 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 DHI + L + + VYA PD + HL Y F Sbjct: 133 FDHIGALHALLA-----EWNVPVYAHPDELPHLTGEVPYRFPDP 171 >gi|168209333|ref|ZP_02634958.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] gi|170712516|gb|EDT24698.1| metallo-beta-lactamase family protein [Clostridium perfringens B str. ATCC 3626] Length = 287 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|168207796|ref|ZP_02633801.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] gi|170660880|gb|EDT13563.1| metallo-beta-lactamase family protein [Clostridium perfringens E str. JGS1987] Length = 287 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|169342845|ref|ZP_02863877.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] gi|169299102|gb|EDS81174.1| metallo-beta-lactamase family protein [Clostridium perfringens C str. JGS1495] Length = 287 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|145350454|ref|XP_001419620.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579852|gb|ABO97913.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 413 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 47/146 (32%), Gaps = 32/146 (21%) Query: 52 SNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + V++D G F + R + I+AVL TH H DHI + Sbjct: 27 GDRYVLLDAGLMFPDHEELGIQKVLPDVSFLARWK-DKIEAVLITHGHEDHIGAL----P 81 Query: 98 YFLKQKRP-IDVYAAPDCMKHLFESF-------RYCFKALDDRTYPPIVNPIVIENNDVP 149 + + P +YA M+ + FK D P +E V Sbjct: 82 WVVPALDPSTPIYAGLFTMQLIKRRMQEYSLWNDQRFKVFDMNE-RFQAGPFEMEAVRVT 140 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLG 175 + G+I +HG I G Sbjct: 141 HSIPDCCGLI----FRSEHGTIVHTG 162 >gi|260060893|ref|YP_003193973.1| hypothetical protein RB2501_04830 [Robiginitalea biformata HTCC2501] gi|88785025|gb|EAR16194.1| hypothetical protein RB2501_04830 [Robiginitalea biformata HTCC2501] Length = 458 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 18/78 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----------QVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G Q L+E V IDAVL TH H DH + L Sbjct: 25 DTGDRKILIDCGL---FQGLKELRLKNWEYPPVNVTEIDAVLLTHGHLDHTGYLPRL--- 78 Query: 99 FLKQKRPIDVYAAPDCMK 116 +KQ +Y + Sbjct: 79 -VKQGFKGPIYGTYPTLD 95 >gi|116617740|ref|YP_818111.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096587|gb|ABJ61738.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 609 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + L + I V +H HAD I + + Q+ + ++ + ++ + Sbjct: 50 PDF--EYLIKNTEKIAGVFLSHGHADAIGALP-----YFLQQVNVPIFGSELTIELAKLA 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + D Y I I+ G ++ H SLG G Sbjct: 103 IKDQPALKDYNDYHIINEKSEID-----------FGNVKVSFFNTTHSIPESLGIVIGTE 151 Query: 181 ---VAYCTDVN 188 V Y D Sbjct: 152 YGQVVYTGDFK 162 >gi|268319613|ref|YP_003293269.1| ribonuclease Z [Lactobacillus johnsonii FI9785] gi|262397988|emb|CAX67002.1| ribonuclease Z [Lactobacillus johnsonii FI9785] Length = 309 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + +V++ N + H R+ S GFR Sbjct: 102 TSLR---VSKTRVSYP--IKYVVLKENGLIFENDI----FAVYTARLDH-RVPSFGFRV 150 >gi|262043315|ref|ZP_06016444.1| ribonuclease Z [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039339|gb|EEW40481.1| ribonuclease Z [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 288 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 16/143 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRG 97 +S+ ++ + + D G Q L ++ + TH H DH+ G+ GL Sbjct: 2 TSIILNLQQPTRAEM-WLFDCGEGTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLC 60 Query: 98 YFLKQKRPID--VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Q + +Y + + + + P+ I + Sbjct: 61 SRSMQGNSLPLTLYGPKGLKEFV--------ETALRLSGSWTDYPLTIIEVGPGLVFDEE 112 Query: 156 GGVIEAIPILQQHGRISSLGFRF 178 G + A P+ + G+R Sbjct: 113 GYRVTAYPLSHP---VECYGYRI 132 >gi|237785709|ref|YP_002906414.1| hypothetical protein ckrop_1123 [Corynebacterium kroppenstedtii DSM 44385] gi|237758621|gb|ACR17871.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM 44385] Length = 719 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 35/138 (25%) Query: 53 NTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 N +I+D G PDF L +++ ++A++ TH H DHI I Sbjct: 180 NRLLIIDCGVLFPSSDEPGVDLILPDF--SYLEDKMDRVEALVVTHGHEDHIGAI----P 233 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + LK + I + A+ + R + +P +IE N+ G Sbjct: 234 WLLKLRSDIPIVASRFTCALIAAKCREHHQ-----------HPKLIEVNETS---HEKYG 279 Query: 158 VIEAIPILQQHGRISSLG 175 + H LG Sbjct: 280 PFDLRFWNVNHSIPDCLG 297 >gi|110799970|ref|YP_696283.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|168213565|ref|ZP_02639190.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|110674617|gb|ABG83604.1| metallo-beta-lactamase family protein [Clostridium perfringens ATCC 13124] gi|170714943|gb|EDT27125.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 286 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|291542690|emb|CBL15800.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Ruminococcus bromii L2-63] Length = 269 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 83/261 (31%), Gaps = 59/261 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G+++ + + + N ++VD G Sbjct: 4 KIIMLGTGSAM---VTDC--------------YNTCFLL-----KSENDCLLVDAGGGNG 41 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI----------DVYAA 111 + + V SI + TH H DHI G + ++Q + ++Y Sbjct: 42 ILSAIKKSGVAWNSIKTMFITHSHTDHILG----AVWVIRQISALMNSGKYNGNFNIYCH 97 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 +C+ + + + +N + N+V K G I + Sbjct: 98 DECVDSITAICNHTLAP----KFLKNINTKIF-INEVKDGEKQNAGSIRLTFFDIFSDKT 152 Query: 172 SSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK-------NGLHSS-HF 218 GF+ +A D F + +QN D+L+ +A + H Sbjct: 153 KQFGFKAVFPSGKVLACLGD-EPFNEKCRNFVQNCDYLMCEAFCLYSQKDIFKPYEKFHS 211 Query: 219 SLSESLKKIELINPKNAILTH 239 + ++ K E + KN IL H Sbjct: 212 TALDAGKLAESLFAKNLILYH 232 >gi|260184721|ref|ZP_05762195.1| hypothetical protein MtubCP_01512 [Mycobacterium tuberculosis CPHL_A] gi|289445397|ref|ZP_06435141.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289418355|gb|EFD15556.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length = 375 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 86/300 (28%), Gaps = 81/300 (27%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 74 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 129 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 130 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 189 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 190 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 248 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 249 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 307 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDGMQ 265 N L +SH S + + PK IL D+ ++ + GM Sbjct: 308 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLIL---SHYAPNDLPDSQWLDKIKKNYSGMT 364 >gi|254495761|ref|ZP_05108675.1| beta-lactamase domain protein [Legionella drancourtii LLAP12] gi|254355039|gb|EET13660.1| beta-lactamase domain protein [Legionella drancourtii LLAP12] Length = 254 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 51 GSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRP 105 S +++D G D + + + IDAV +H HADHI G++ R + RP Sbjct: 28 DSGKKLLIDCGTDIRFSLTKAKYVPHEIDAVFASHLHADHIGGLEWFALQRKFVSPNGRP 87 >gi|228992487|ref|ZP_04152414.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] gi|228767121|gb|EEM15757.1| Zn-dependent hydrolase [Bacillus pseudomycoides DSM 12442] Length = 556 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G + Y Sbjct: 108 LGEAGMLGRVDLKTIDSNSA-----VEFNTTTVSFFGTTHSIPDSVGVCFHTSQGAIVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|182626066|ref|ZP_02953828.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] gi|177908678|gb|EDT71194.1| metallo-beta-lactamase family protein [Clostridium perfringens D str. JGS1721] Length = 286 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|168218012|ref|ZP_02643637.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] gi|182379965|gb|EDT77444.1| metallo-beta-lactamase family protein [Clostridium perfringens NCTC 8239] Length = 287 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++D GP + Q+ + + + V+ THPH DHI G+ + Sbjct: 57 NGNDILIDAGPRSNSKELLEQLKAKNIDDFELVIATHPHEDHIGGMVDV 105 >gi|91789032|ref|YP_549984.1| beta-lactamase-like protein [Polaromonas sp. JS666] gi|91698257|gb|ABE45086.1| beta-lactamase-like protein [Polaromonas sp. JS666] Length = 262 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 50/163 (30%), Gaps = 32/163 (19%) Query: 55 TVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 V++D G V R IDAV TH H DHI R L+ I V+ Sbjct: 32 RVLIDCGLGLKHLVYRLGQAGLQPEDIDAVFITHEHGDHIG---CARSLSLRY--RIPVW 86 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + T P + ++ D G ++ P H Sbjct: 87 MSHGTHAA---------------TGSPDFDGLLRTARD---GETIELGGLQLTPFTVPHD 128 Query: 170 RISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 L + + TD+ A + L+ D L+++ Sbjct: 129 AREPLQLTCTDGSAKLGILTDLGHATAHVIAHLKACDALLLEC 171 >gi|29376000|ref|NP_815154.1| hypothetical protein EF1433 [Enterococcus faecalis V583] gi|293382353|ref|ZP_06628292.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|293389385|ref|ZP_06633843.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|312903171|ref|ZP_07762351.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312907405|ref|ZP_07766396.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910023|ref|ZP_07768870.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|29343462|gb|AAO81224.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|291080298|gb|EFE17662.1| conserved hypothetical protein [Enterococcus faecalis R712] gi|291081272|gb|EFE18235.1| conserved hypothetical protein [Enterococcus faecalis S613] gi|310626433|gb|EFQ09716.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310633047|gb|EFQ16330.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311289296|gb|EFQ67852.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|315029946|gb|EFT41878.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315033834|gb|EFT45766.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315575514|gb|EFU87705.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315577553|gb|EFU89744.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315580045|gb|EFU92236.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 233 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 63/222 (28%) Query: 51 GSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N++++++ G D Q + +I +L TH H DH I+ + D Sbjct: 20 DGNSSLMLEAGLKPKDIMKQGI--NFSNIQGLLVTHEHGDHSKYINDIL-----LAGRFD 72 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A+ ++ L ++ R+ +++ N G P Sbjct: 73 VWASRGTLEGL---------GINRRS-------HILKANQQQ-----KIGDWLVKPFATI 111 Query: 168 HGRISS-----LGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------- 208 H + LGF + + TD N P + +++ +++ Sbjct: 112 HDDKKARAREPLGFLILSPSGKKIVFATDTNYLP----KTFKDVTHWLVECNHDIKLVRQ 167 Query: 209 ------LKNGLHSSHFSLSESLKKIE---LINPKNAILTHMH 241 +++ + +H S+ K + L + L H+ Sbjct: 168 SKLPKSVQDRILRTHMSIDACKKFFQSTDLTKTEEIYLIHLS 209 >gi|326693738|ref|ZP_08230743.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc argentinum KCTC 3773] Length = 618 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 14/136 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + L + I V +H HAD I + + Q+ + ++ + ++ + Sbjct: 50 PDF--EYLIKNSDKIAGVFLSHGHADAIGALP-----YFLQQVNVPIFGSELTIELAKLA 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FR 177 + D Y I I+ DV + + I + + +G+I G F+ Sbjct: 103 IKEQPALADYDDYHVINEKTEIDFGDVTVSFFNTTHSIPDSLGVVLGTPYGQIVYTGDFK 162 Query: 178 FGNVA---YCTDVNAF 190 F A Y TD+ Sbjct: 163 FDQTANQSYRTDIARL 178 >gi|259503084|ref|ZP_05745986.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259168950|gb|EEW53445.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 612 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ I V TH HAD I + YFL + V+ + + + + + Sbjct: 115 LRERKDKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKKHKEV 169 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I + + G I G F+F A Sbjct: 170 KKFNDFHVVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETAEGNIVYTGDFKFDQTATK 229 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 230 GYQTDLARLAE 240 >gi|167394641|ref|XP_001741036.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894554|gb|EDR22521.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 261 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 91/292 (31%), Gaps = 59/292 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ILGCG ++G KN+ + L ++D G Sbjct: 2 SLKVRILGCGGNIGF---------------KNQ--STCLMCFCGELNEETKVTLIDGGTG 44 Query: 64 FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +++ +++ I V+ TH H DH GI L F + C L S Sbjct: 45 I-IRLKEKEIPMIKDVVLTHAHIDHTCGISLLVESFYNDQ------LIQVCKPTLHCSHI 97 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------GVIEAIPILQQHGRISSLGFR 177 + L+D + + +IE + G I + H + +LG+ Sbjct: 98 -VLEQLNDSIFKKGIWMNLIEKGFMTFQSIEDGEQCVLSNGIIITAVKCLHSVL-TLGYI 155 Query: 178 FGN----VAYCTDV-------NAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSL 220 N A+ D E KL+ + I + L S+H + Sbjct: 156 VSNKTSAFAFTGDTTYYEPFWKRISEE--PKLKGV---ICEVSLSNELENRALISNHMTP 210 Query: 221 SESLKKIELINPK-NAILTHMHVDLDYDMVLKSTPS---RVVPAFDGMQFSS 268 + I+ ++P TH+ Y V++ V+ D M Sbjct: 211 KMLQEGIKHLSPNIKVYATHI-KSYSYYKVIEQLKELDREVIVLEDEMVLEF 261 >gi|148655120|ref|YP_001275325.1| beta-lactamase domain-containing protein [Roseiflexus sp. RS-1] gi|148567230|gb|ABQ89375.1| beta-lactamase domain protein [Roseiflexus sp. RS-1] Length = 278 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 65/224 (29%), Gaps = 53/224 (23%) Query: 50 RGSNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R N ++VD G ++R + + A+L TH H DH L ++ Sbjct: 29 RSRNAAILVDCGVPLRTIERALMRSGLSPDQLSAILITHEHGDHTM-----SAGPLARRY 83 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + + A + + + ++ + I Sbjct: 84 GVPLIANQATLAAMEH------------------DLTGATVRELATGTATMIADIHVGSF 125 Query: 165 LQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIIDA------------ 208 H +G+ +C TD+ + + L D ++I+A Sbjct: 126 PVSHDAAEPVGYTMSVDGWCVGIATDLGRWDDVVVNGLTPADLVVIEANHDQERLWRAPY 185 Query: 209 -----LKNGLHSSHFSLSESLKKIELINP----KNAILTHMHVD 243 + + H + + + + ++A L H+ + Sbjct: 186 AGVVKQRIYSPTGHLDNVAAGRLLARLGTDGRRRSAWLAHLSQE 229 >gi|315186215|gb|EFU19977.1| beta-lactamase domain protein [Spirochaeta thermophila DSM 6578] Length = 288 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 69/222 (31%), Gaps = 32/222 (14%) Query: 52 SNTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + ++VD G Q L E V I L+TH HADHI G + + KR Sbjct: 44 NEQHLLVDCGTR-GTQALHELGLSVGEIQHYLFTHSHADHIGGAEEIMLVNRYMKRRRPH 102 Query: 109 YAAPDCMKHLF--ESFRYCFKALDDRTYPPIVNP---IVIENNDVPICMKSAG-----GV 158 P + L ES R + + P +N VI + G Sbjct: 103 LYIPRAYQRLLWNESLRGGSAYSERHPFKPHLNLEDFFVIHTPRLLFKKPRPIYQIWVGD 162 Query: 159 IEAIPILQQHGRIS---------SLGFRFG-NVAYCTDVNAFPAESLEKLQ---NLDFLI 205 ++ + H S G + + D F E + L+ + Sbjct: 163 MDILLFRTIHIPEQARSWKEAAWSTGLLIDRRILFTGDT-RFDPEIITYFHEHYPLEVIF 221 Query: 206 IDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 D + H S E + I K L MH D++ Sbjct: 222 HDC-QFFDGGVHASFEELCTLPDEIKAK-TFL--MHYGDDWE 259 >gi|259419345|ref|ZP_05743262.1| metallo-beta-lactamase family protein [Silicibacter sp. TrichCH4B] gi|259345567|gb|EEW57421.1| metallo-beta-lactamase family protein [Silicibacter sp. TrichCH4B] Length = 555 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 54/184 (29%), Gaps = 41/184 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L E+ ++ + TH H D Sbjct: 21 AYVYGYGAPGKERLILVDLGVAFPDMDTTPGVDLIMPDISWLAERADQLEGIFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD----DRTYPPI--VNPI 141 HI + L + + VYA D +P + + P Sbjct: 81 HIGAVAHLYS-----RLNVPVYARAFTANIARRKMEEQGHDPDAVVTISPWPEVTKLGPF 135 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQN 200 I + + +GG++ P GR+ G F+ D N E+ + Sbjct: 136 TIGAVPISHSIPESGGLVIDSPA----GRVIHTGDFKL-------DANPIVGEAF----D 180 Query: 201 LDFL 204 D Sbjct: 181 PDLW 184 >gi|303286733|ref|XP_003062656.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456173|gb|EEH53475.1| predicted protein [Micromonas pusilla CCMP1545] Length = 238 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 52 SNTTVIVDTG-------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 T ++DTG P + V ++ VL TH H DH+ G+ +R F Sbjct: 38 GKTRWLIDTGEGKRAYAPLLRRAMKAHGVEGLEGVLLTHWHGDHVGGLASVRAMF 92 >gi|189423102|ref|YP_001950279.1| beta-lactamase [Geobacter lovleyi SZ] gi|189419361|gb|ACD93759.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 422 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 31/184 (16%) Query: 55 TVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++++D G Q L E L+ DA++ +H H DH G+ + VY Sbjct: 25 SILLDAGLPLAANSQPLTEADLAADALIISHSHQDHC-GLLDTIP------SSMPVYIGK 77 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 L + + L + I + + G I P L H Sbjct: 78 VAKGLLNATRLFLGHPLLANDFRTIDAW-----------LPFSVGDITITPYLMDHSATD 126 Query: 173 SLGFRFG----NVAYCTDVNAFPAES--LEKL-----QNLDFLIIDALKNGLHSSHFSLS 221 + GF + Y D +S EKL QN+D ++++ +S FS Sbjct: 127 AYGFIVEAEGKRLFYTGDFRGHGRKSVLFEKLLNKPPQNIDLMLMEGTMLQRDNSSFSDE 186 Query: 222 ESLK 225 +S++ Sbjct: 187 KSVE 190 >gi|312133218|ref|YP_004000557.1| metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum subsp. longum BBMN68] gi|311772419|gb|ADQ01907.1| Putative metallo-Beta-lactamase superfamily hydrolase [Bifidobacterium longum subsp. longum BBMN68] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 28/171 (16%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 88 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 141 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V + + + + Sbjct: 142 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 201 Query: 161 AIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIID 207 A+ + G + G + TD+ F + E + +D L++D Sbjct: 202 AVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEF-GKIGE--KGVDLLMMD 249 >gi|296453655|ref|YP_003660798.1| beta-lactamase domain-containing protein [Bifidobacterium longum subsp. longum JDM301] gi|291517280|emb|CBK70896.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Bifidobacterium longum subsp. longum F8] gi|296183086|gb|ADG99967.1| beta-lactamase domain protein [Bifidobacterium longum subsp. longum JDM301] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 88 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 141 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + + + V P +E +V + A Sbjct: 142 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 201 Query: 157 GVIEAIP 163 V P Sbjct: 202 AVYVKTP 208 >gi|254797166|ref|YP_003082006.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia risticii str. Illinois] gi|254590406|gb|ACT69768.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia risticii str. Illinois] Length = 542 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 50/172 (29%), Gaps = 25/172 (14%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++D G F + E+ + A++ TH H DH + + Sbjct: 28 GQWIMIDCGAGFADAELPGIDIVVADISFIEERKDDLLAIIITHIHEDHCGALP-----Y 82 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L + + VY L + P + + I M + + Sbjct: 83 LWDRLAVPVYTTQFTANFLLKKIGRDKVQFPIHVVEPGKLLHLGDFTLEFINMTHSVPEM 142 Query: 160 EAIPILQQHGRISSLG-FRFGN---VAYCTDVNAFPAESLEKLQNLDFLIID 207 AI I + G ++ + V D S + + ++ D Sbjct: 143 NAIAIHTADKVVIHSGDWKIDDDPVVGKTCDFKRLEELSE---KGVLAMVCD 191 >gi|88801310|ref|ZP_01116838.1| pyrroloquinoline quinone biosynthesis protein PqqB [Polaribacter irgensii 23-P] gi|88781968|gb|EAR13145.1| pyrroloquinoline quinone biosynthesis protein PqqB [Polaribacter irgensii 23-P] Length = 314 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 90/270 (33%), Gaps = 53/270 (19%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G P I C ++ SL + + + + + PD Sbjct: 33 ITVLGIAQDAGYPHIGCQKSCCTNFYEGKYKKQKVVSL---GLVDTENKQKWLFEATPDI 89 Query: 65 YMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLK---QKRPIDVYAAPDCM 115 Q+ + ID + TH H H G+ YF K ++ V+A P Sbjct: 90 ATQLADLEQNHLKTNELIDGIFLTHAHIGHYTGL----MYFGKEALGQKETKVFAMPKMR 145 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS-AGGVIEAIPILQQHGRI--S 172 +L + + + +V I N + ++ P L H Sbjct: 146 TYLTK----------NGPWSQLVKLRNIVFNKLQADSTLVLNNKLKVTPFLVPHRDEFSE 195 Query: 173 SLGFRFGNV----AYCTDVNAFPAESLEK-----LQNLDFLIIDAL--------KNGLHS 215 ++G++ + + D++ + E +K ++ +D+ +DA + Sbjct: 196 TIGYKIEGMHKTALFIPDIDKW--EKWKKNIVIEVKKVDYAFLDATFFQDGEVDRPMAKI 253 Query: 216 SHFSLSESLKKIEL--INPK-NAILTHMHV 242 H + E+++ + I+ K H + Sbjct: 254 PHPFIEETMRLFKKEAISIKNKIYFIHFNH 283 >gi|71018729|ref|XP_759595.1| hypothetical protein UM03448.1 [Ustilago maydis 521] gi|46099353|gb|EAK84586.1| hypothetical protein UM03448.1 [Ustilago maydis 521] Length = 790 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 21/120 (17%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV------LREQVLSIDAVLYT 82 + P + R SSL + N TV+VD G Q + E++ ++ +L T Sbjct: 13 TSSMPNSTRNYSSLLF-----KLDNHTVMVDCGEGTQRQFRSRYIGVDERLANLKTILVT 67 Query: 83 HPHADHIHGIDGLRGYFLKQKR----------PIDVYAAPDCMKHLFESFRYCFKALDDR 132 H HADH+ G+ L + I++Y P + + C+ L + Sbjct: 68 HLHADHVLGLVPLLMSMMGPTGVSSAPESSAPRIEIYGPPGLRALIRTTLSLCYSQLSGK 127 >gi|311105686|ref|YP_003978539.1| metallo-beta-lactamase [Achromobacter xylosoxidans A8] gi|310760375|gb|ADP15824.1| metallo-beta-lactamase superfamily protein 3 [Achromobacter xylosoxidans A8] Length = 363 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 77/266 (28%), Gaps = 78/266 (29%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGY----FLKQKRP 105 +VD G Y Q+ R V + AV TH H DHI + L Y + K Sbjct: 61 DGKAYVVDLGSGAYRQLRRAGVKPGTEQAVFLTHLHTDHIIDLANLLMYDPSARRRAKAS 120 Query: 106 IDVYAA----------------------------PDCMKHLFESFR-------------- 123 + +Y D ++ + Sbjct: 121 MQIYGPGRRGALPPLAPGMKDDPVIHAENPSAGTRDLVESVIAGMSADLNIRVRSEGVPD 180 Query: 124 --YCFKALDDRTYPPIV-NPIVIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF- 178 F+A D +V +P + ++ IL HG + +RF Sbjct: 181 IRQFFQAHDIEVPAGVVKDPNTEPAPPMEPFPVWQDERVKVSAILVPHGLVYPNFAYRFD 240 Query: 179 ---GNVAYCTDVNAFPAESLEKLQNLDFLI---ID------------------ALKNGLH 214 G+V + D A ++ + D L+ ID AL L Sbjct: 241 TKAGSVVFSGDT-AVSENLIKLARGADILVHEAIDPAWVDHIVGAKPWDARQQALAKQLL 299 Query: 215 SSHFSLSESLKKIELINPKNAILTHM 240 +H + + + K +L+H+ Sbjct: 300 EAHTTPQQVGEVATRAGVKTLVLSHL 325 >gi|116623576|ref|YP_825732.1| beta-lactamase domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226738|gb|ABJ85447.1| beta-lactamase domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 556 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 34/172 (19%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R ++VD G F L+E + A++ TH H DHI + Sbjct: 25 RYGEDIIVVDCGMMFPDAELLGVDLVMPDLTFLKENQSQVRALILTHGHEDHIGAVP--- 81 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 ++ + + VY P + + Y P +I+ A Sbjct: 82 --YMLSEIDVPVYGTPFTLSLVERRM---------EEYDLEKEPRLIKVKPK---QAIAV 127 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFL 204 G + I H +S++ G + + D P + +L +L L Sbjct: 128 GPFKIEFIHVTHSIVSAVALAITTPLGVIIHTGDFKVDPTPTDNELFDLHTL 179 >gi|322690611|ref|YP_004220181.1| hypothetical protein BLLJ_0420 [Bifidobacterium longum subsp. longum JCM 1217] gi|320455467|dbj|BAJ66089.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 28/171 (16%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 88 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 141 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V + + + + Sbjct: 142 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 201 Query: 161 AIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIID 207 A+ + G + G + TD+ F + E + +D L++D Sbjct: 202 AVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEF-GKIGE--KGVDLLMMD 249 >gi|308177475|ref|YP_003916881.1| putative competence protein [Arthrobacter arilaitensis Re117] gi|307744938|emb|CBT75910.1| putative competence protein [Arthrobacter arilaitensis Re117] Length = 755 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 51 GSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 G ++DTGP + R + S+ V TH H DH G++ L Sbjct: 528 GDARGWLIDTGPPESGLLACLDRLGIQSLSKVFITHTHNDHFGGVEELED 577 >gi|4104709|gb|AAD02119.1| unknown [Streptomyces toyocaensis] Length = 528 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ + AV+ TH H DHI G+ Y L+++R I V + + L + Sbjct: 37 IRDRLDDVVAVVLTHGHEDHIGGV----PYLLRERRDIPVVGSKLTLAFLEAKLK----- 87 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 + P + + + G + + H SL R G V + Sbjct: 88 ------EHGIRPRTVRVREGD---RRGLGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHT 138 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 139 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 198 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 199 APRRVIVSSFASHVH 213 >gi|46191137|ref|ZP_00120594.2| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Bifidobacterium longum DJO10A] gi|189439813|ref|YP_001954894.1| putative metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum DJO10A] gi|317482566|ref|ZP_07941581.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp. 12_1_47BFAA] gi|322688625|ref|YP_004208359.1| hypothetical protein BLIF_0437 [Bifidobacterium longum subsp. infantis 157F] gi|189428248|gb|ACD98396.1| Putative metallo-beta-lactamase superfamily hydrolase [Bifidobacterium longum DJO10A] gi|316915988|gb|EFV37395.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp. 12_1_47BFAA] gi|320459961|dbj|BAJ70581.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 616 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 28/171 (16%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 88 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 141 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V + + + + Sbjct: 142 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 201 Query: 161 AIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIID 207 A+ + G + G + TD+ F + E + +D L++D Sbjct: 202 AVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEF-GKIGE--KGVDLLMMD 249 >gi|254821242|ref|ZP_05226243.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium intracellulare ATCC 13950] Length = 558 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI GI Sbjct: 35 EHLGRLLIIDCGVMFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGGI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + LK + I V + + + + + P+ +E + KS Sbjct: 91 --PFLLKLRPDIPVVGSRFTLALVAA-----------KCREHRLKPVFVEVAE---GQKS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 THGVFECQYFAVNHSIPDALA 155 >gi|269123716|ref|YP_003306293.1| beta-lactamase domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268315042|gb|ACZ01416.1| beta-lactamase domain protein [Streptobacillus moniliformis DSM 12112] Length = 619 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 65/224 (29%), Gaps = 56/224 (25%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F + L V + A+L TH H DHI + ++ + Sbjct: 94 IVIDAGLTFPEDEHLGVDLIIPSFEYLASNVSKVKALLITHGHEDHIGAVP---YFYQRL 150 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I +Y ++ F Y N + I G Sbjct: 151 GSGIPMYGGKLSLELALAKFEKVTVKKPKCVYISNRNEVKI------------GKYFTVE 198 Query: 163 PILQQHGRISSLGFRF----------GNVAYCTDVNAFPAESLEK-------LQNLDFLI 205 I H R G+ D+ E + + +D L+ Sbjct: 199 FISVTHSIPDCYAIRVKTPTSTILHTGDF--KVDLTPVNDERFDFGRLASIGEEGVDLLL 256 Query: 206 ID---ALKNGLHSSHFSLSESLKKIELINPK-NAIL----THMH 241 D A G S ++ S+ E+ K IL +H+H Sbjct: 257 SDSTNAQVPGSTPSESTVGRSID-AEVAKAKGRVILASFASHVH 299 >gi|38195950|gb|AAR13677.1| competence protein [Acinetobacter baumannii] Length = 319 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%) Query: 50 RGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGID 93 + S ++DTG P Q V +D V+ +H DH Sbjct: 74 QHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVRQLDHVVLSHLDQDH----- 124 Query: 94 GLRGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 G F ++ I V + L + F+YC + + P ++ ++ + + Sbjct: 125 --SGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQ--WHYPELDIQILWPKEKDL 180 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 ++ + + Q ++ G+ N D E L++ L ID L Sbjct: 181 AFVASNQNQYSCVVYLQFKKVG--GY--QNFLIMGDAGW--EAEYELLKDYPNLKIDVLV 234 Query: 211 NGLHSS-HFSLSESLKKIELINPKNAI 236 G H S H S + + + PK AI Sbjct: 235 LGHHGSKHSS---AYDFLATLKPKLAI 258 >gi|302554709|ref|ZP_07307051.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302472327|gb|EFL35420.1| beta-lactamase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 554 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I AV+ TH H DHI G+ Y L+++ I V + + L + Sbjct: 63 IRDRLDDIVAVVLTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFLEAKLK----- 113 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 + P + + + G + + H SL R G V + Sbjct: 114 ------EHGIRPRTVRVREGD---RRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHT 164 Query: 185 TDVN--AFPAES-------LEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D FP + +L + +D + D+ G +S L+ +++++ Sbjct: 165 GDFKMDQFPLDERITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 224 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 225 APRRVIVSSFASHVH 239 >gi|217076657|ref|YP_002334373.1| metal-dependent hydrolase [Thermosipho africanus TCF52B] gi|226707722|sp|B7IG18|Y544_THEAB RecName: Full=UPF0173 metal-dependent hydrolase THA_544 gi|217036510|gb|ACJ75032.1| metal-dependent hydrolase [Thermosipho africanus TCF52B] Length = 223 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 45/205 (21%) Query: 52 SNTTVIVD---TG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +N +++D TG P F ID +L TH H DHI Sbjct: 15 TNKKILIDPFITGNPAFPK---DFSFDKIDYILVTHGHGDHIG----------------- 54 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 D ++ + + Y + + G ++ P L Sbjct: 55 -----DTVELSKKYNATVVSNFEICNYLQKKGVNKVHPMHIGGSFNFDFGKLKMTPALHG 109 Query: 168 HGRIS----SLGFRFGNVAYCTDVNAFPA------ESLEKLQNLDFLIIDALKNGLHSSH 217 G I G G ++ + + A + +E L+ +D I+ + Sbjct: 110 SGIIEGDNIIYGGNPGGFVIYSEKSVYHAGDTGLTKDMELLRGVDVAIL----PIGGNFV 165 Query: 218 FSLSESLKKIELINPKNAILTHMHV 242 + ++LK +E+I PK ++ MH Sbjct: 166 MDVEDALKAVEMIKPK--VVIPMHY 188 >gi|169599006|ref|XP_001792926.1| hypothetical protein SNOG_02316 [Phaeosphaeria nodorum SN15] gi|160704518|gb|EAT90528.2| hypothetical protein SNOG_02316 [Phaeosphaeria nodorum SN15] Length = 1327 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 89/302 (29%), Gaps = 88/302 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R S+ + ++D G + Sbjct: 874 EVITLGTGSAL----------------PSKYRNVSATLVRVPG----VGNYLLDCGENTL 913 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPID--VYAAPDC 114 Q+ LR+ + ++ + +H HADH G G+ R ++ + Sbjct: 914 GQLSRVFPPEELRDIIKNLRLIWISHLHADHHLGTTGVIRAWYHLVHGGVPNKEKLDAAT 973 Query: 115 MKHLFESFR-------------YCFKALDDRTYPPIVNPIVIENN--------------- 146 + + + Y + +++D Y I+ V N Sbjct: 974 VLNNSSQYGLSVISHTGMLQWLYEYSSVEDFGYSRILPLEVSPNETGRGSLLNILNSFNA 1033 Query: 147 ---------DVPICMKSAGGVIEAIPILQQHGRISS-----------LGFRFGNVAYCTD 186 I+ ++ HG ++ + V+Y D Sbjct: 1034 EQNYDTTIKRNQYPQLFGFEDIQTAKVVHCHGAMAVCITFPRSPEDPHNLKPLKVSYSGD 1093 Query: 187 VNAFPAESLEKL-QNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 P ++ ++ LI +A L + H + SE+L +N K +LTH Sbjct: 1094 CR--PCRHFARVGRDTTVLIHEATFDDELLGDARAKKHSTTSEALDIGSQMNAKAVVLTH 1151 Query: 240 MH 241 Sbjct: 1152 FS 1153 >gi|146278025|ref|YP_001168184.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145556266|gb|ABP70879.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 557 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 43/164 (26%), Gaps = 35/164 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHADH 88 + G +IVD G F L E+ I+A+ TH H DH Sbjct: 22 YVYGYGPEGRERLIIVDLGVTFPDMETTPGVDLIMPDISWLEERQDRIEAIFITHAHEDH 81 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 I + L + VYA F + P+ ++ Sbjct: 82 IGALGHLWP-----RLKAPVYARRFTGTIGRLKF--------EEHGLPVDRINIVGARPE 128 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + G E + H S G + + D Sbjct: 129 VVE----AGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFK 168 >gi|167037816|ref|YP_001665394.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116234|ref|YP_004186393.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856650|gb|ABY95058.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929325|gb|ADV80010.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 240 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 33/228 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK----- 103 NT +++D G + R + + ++ +H H+DH+ + LR K Sbjct: 25 EDENTHILLDCGSGVISRYQRYYDLNKLKYIILSHLHSDHVADMMVLRYALDIMKSRGMI 84 Query: 104 -RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P++VY +++FE F+ + + N +I + + G I Sbjct: 85 TEPVNVYCPQ-TPENVFEDFK----------FKDVFNLHII---NEEATLNLEGIEIS-- 128 Query: 163 PILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSH 217 + + + + Y D + + + D + D G+ H Sbjct: 129 -FKKMTHPVETYAVKIKKGEKIFVYSGDT-TYNEDLISFANKADLFLCDGNFLTGMQGPH 186 Query: 218 FSLSESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 + +E+ + + K +LTH+ + DY A D Sbjct: 187 LTAAEAAEIAKKAECKRLVLTHLSPLISIKDYYDEAIKVFGNTEIARD 234 >gi|330003569|ref|ZP_08304684.1| ribonuclease Z [Klebsiella sp. MS 92-3] gi|328536909|gb|EGF63208.1| ribonuclease Z [Klebsiella sp. MS 92-3] Length = 288 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 16/143 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRG 97 +S+ ++ + + D G Q L ++ + TH H DH+ G+ GL Sbjct: 2 TSIILNLQQPTRAEM-WLFDCGEGTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLC 60 Query: 98 YFLKQKRPID--VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Q + +Y + + + + P+ I + Sbjct: 61 SRSMQGNSLPLTLYGPKGLKEFV--------ETALRLSGSWTDYPLTIIEVGPGLVFDEE 112 Query: 156 GGVIEAIPILQQHGRISSLGFRF 178 G + A P+ + G+R Sbjct: 113 GYRVTAYPLSHP---VECYGYRI 132 >gi|31794969|ref|NP_857462.1| hypothetical protein Mb3825 [Mycobacterium bovis AF2122/97] gi|121639713|ref|YP_979937.1| hypothetical protein BCG_3858 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992208|ref|YP_002646898.1| hypothetical protein JTY_3860 [Mycobacterium bovis BCG str. Tokyo 172] gi|31620567|emb|CAD96011.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121495361|emb|CAL73848.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775324|dbj|BAH28130.1| hypothetical protein JTY_3860 [Mycobacterium bovis BCG str. Tokyo 172] Length = 375 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 74 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 129 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 130 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 189 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 190 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 248 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 249 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 307 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 308 NAFPPNYLVNSHISAEQVGEVAAAAKPKQLILSH 341 >gi|21221026|ref|NP_626805.1| integral membrane protein [Streptomyces coelicolor A3(2)] gi|6714673|emb|CAB66245.1| putative integral membrane protein [Streptomyces coelicolor A3(2)] Length = 855 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VDTGPD LR + + VL TH HADH+ G+ Sbjct: 617 GEGTGVVVDTGPDPALVDHCLRALGITRVPLVLLTHFHADHVAGL 661 >gi|84497074|ref|ZP_00995896.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649] gi|84381962|gb|EAP97844.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649] Length = 565 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 23/126 (18%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + + VI+ PDF +R+++ +DA++ TH H DHI G+ Y L+++ Sbjct: 53 VLFPDDSQPGVDVII---PDFTW--IRDRLDKVDAIVLTHGHEDHIGGV----PYLLRER 103 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I V + + + + + + P IE + + G + Sbjct: 104 PDIPVVGSRLTLALI-----------EAKLTEHRIKPRTIEVVEGD---RRKFGPFDCEF 149 Query: 164 ILQQHG 169 I H Sbjct: 150 IAVNHS 155 >gi|312135051|ref|YP_004002389.1| beta-lactamase domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775102|gb|ADQ04589.1| beta-lactamase domain protein [Caldicellulosiruptor owensensis OL] Length = 295 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N V++D+GP+ Q + R V ++ V+ THPH DHI +D + Sbjct: 58 SILIKTP----ENKFVLIDSGPNSAEQDVLQTLDRLNVQKLNVVIATHPHEDHIGNMDKI 113 >gi|148263111|ref|YP_001229817.1| ribonuclease Z [Geobacter uraniireducens Rf4] gi|146396611|gb|ABQ25244.1| Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Geobacter uraniireducens Rf4] Length = 336 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 L I + ER ++ D G + ++L I + +H H DH G D L Sbjct: 17 PGLYIDFLFER---RAILFDLGD--LADLTPRKLLRISHIFVSHTHVDHFIGFDQLVRLC 71 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 L +++ + +Y + + + + YP + +E + Sbjct: 72 LGREKRLHLYGPAGFVDQVGHRLA-AYTWNLVQNYPTDFTIVAVELH 117 >gi|117925032|ref|YP_865649.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1] gi|117608788|gb|ABK44243.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1] Length = 739 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 23/149 (15%) Query: 53 NTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +VD GP+ ++ + I+ + +TH H DH G+ L ++ R I +A Sbjct: 252 GRIFLVDAGPNIERSLISLGIGLNEIEGIFHTHSHDDHFAGLASL----IRADRRIKYFA 307 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 P + + ++D+ + E +D+ ++ +E +P+ H Sbjct: 308 TPLVRHSVVKKLC-ALLSIDESNFS-----HYFEVHDLEFDKWNSIEGLEVMPLFSPHPV 361 Query: 171 ISSL---------GFRFGNVAYCTDVNAF 190 ++L G+R A+ D +F Sbjct: 362 ENNLFVFRTLWEDGYR--TFAHYADTISF 388 >gi|332174807|gb|AEE24061.1| beta-lactamase-like protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 279 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 31/221 (14%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSIDA---VLYTHPHADHIHGIDGLRGYFLKQKRP 105 E T +I+D G L ++++ D +L +H H DHI G F KR Sbjct: 32 ELNDGTDIIIDAGTGIR--ALGQKLVKKDGDIHLLLSHNHWDHIQGFPFFAPIFQP-KRN 88 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAI 162 I + + K + +P + + ++ + + G + Sbjct: 89 IHITPGQTTL----GEHDNILKQMSGSYFPVQFDTLQSSILLDVKAENIQQWHIGKTKIT 144 Query: 163 PILQQHGRISSLGFRFGN---VAYCTDVNAFPA--------ESLEKLQNLDFLIIDA--- 208 H S + V Y TD +P + +E ++ D ++ DA Sbjct: 145 RQKINHPGGGSAYSIIADGKKVVYITDNELYPPYKKSTDFLDWVEFARDADLVVHDAQYM 204 Query: 209 LKNGLHSS---HFSLSESLKKIELINPKN-AILTHMHVDLD 245 L + + H E++K K A+ +H H D Sbjct: 205 LADMPGKAGWGHSVAEEAVKLTMACRAKRLALYSHDHSRTD 245 >gi|297564506|ref|YP_003683478.1| beta-lactamase domain-containing protein [Meiothermus silvanus DSM 9946] gi|296848955|gb|ADH61970.1| beta-lactamase domain protein [Meiothermus silvanus DSM 9946] Length = 213 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Query: 50 RGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++VDTG + + + AVL TH H DH+ G + L QK + Sbjct: 14 DTPQGSLLVDTGIPWESRKLLRLLALTQPAAVLLTHHHLDHVGG-----AWVLWQKYRMP 68 Query: 108 VYAAP 112 VYA P Sbjct: 69 VYAHP 73 >gi|227432387|ref|ZP_03914378.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351853|gb|EEJ42088.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 609 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + L + I V +H HAD I + + Q+ + ++ + ++ + Sbjct: 50 PDF--EYLIKNTEKIAGVFLSHGHADAIGALP-----YFLQQVNVPIFGSELTIELAKLA 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN- 180 + D Y I I+ G ++ H SLG G Sbjct: 103 IKDQPVLKDYNDYHIINEKSEID-----------FGNVKVSFFNTTHSIPESLGIVIGTE 151 Query: 181 ---VAYCTDVN 188 V Y D Sbjct: 152 YGQVVYTGDFK 162 >gi|227546371|ref|ZP_03976420.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622374|ref|ZP_04665405.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|227213352|gb|EEI81224.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514371|gb|EEQ54238.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 630 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 28/171 (16%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 102 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 155 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V + + + + Sbjct: 156 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 215 Query: 161 AIPILQQHGRISSLGFRFGNVAYC----TDVNAFPAESLEKLQNLDFLIID 207 A+ + G + G + TD+ F + E + +D L++D Sbjct: 216 AVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEF-GKIGE--KGVDLLMMD 263 >gi|158315750|ref|YP_001508258.1| beta-lactamase domain-containing protein [Frankia sp. EAN1pec] gi|158111155|gb|ABW13352.1| beta-lactamase domain protein [Frankia sp. EAN1pec] Length = 285 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 49/226 (21%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M T+LGC + G+P C S + + R +++D Sbjct: 1 MDVTMELTVLGCRS--GMPAAG----QCSS----------SYLVETEAAR-----LLLDC 39 Query: 61 GPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGL-------------------RGYFL 100 GP + +DAV+ +H H DH + + + Sbjct: 40 GPGAATALSAVMDPRRLDAVVISHLHLDHCYDLLPVGKTLLAGHGRFAELFPTLPELATQ 99 Query: 101 KQKRPIDVYAAPDCMKHLF---ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 Q+ P+ +Y + L F L DR + + E D + + G Sbjct: 100 VQRAPVPLYVPRGGRERLRALAALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVG 159 Query: 158 VIEA-IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD 202 V E + R+ G++AY D + + +++D Sbjct: 160 VHELRHAVPNCGTRVDCA---SGSIAYTGDT-GVTEDLVPFARDVD 201 >gi|114327830|ref|YP_744987.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] gi|114316004|gb|ABI62064.1| metal-dependent hydrolase [Granulibacter bethesdensis CGDNIH1] Length = 406 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADHI 89 +++ I+ RG TV++D G + + + +IDA+L TH H DH+ Sbjct: 171 TAIHINCYLVRGGGRTVLIDAGAGGFKQWGGRLKDNLAQAGIQPAAIDAILLTHAHPDHV 230 Query: 90 HGIDG 94 G+ Sbjct: 231 GGLLD 235 >gi|78221412|ref|YP_383159.1| ribonuclease Z [Geobacter metallireducens GS-15] gi|78192667|gb|ABB30434.1| Beta-lactamase-like protein [Geobacter metallireducens GS-15] Length = 361 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R ++VD G + + + S+DA+ TH H DH G D L + R + ++ Sbjct: 28 RPLGRAILVDCGQ--LHHLAKRVLKSLDAIFITHAHMDHFMGFDTLVRHIHVSPRTVQLF 85 Query: 110 AAP 112 Sbjct: 86 GPA 88 >gi|291563351|emb|CBL42167.1| Metal-dependent hydrolases of the beta-lactamase superfamily I [butyrate-producing bacterium SS3/4] Length = 245 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 66/227 (29%), Gaps = 53/227 (23%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGID 93 RR + +++D G + ++ + + I L TH H DH Sbjct: 12 RRGNCYVL------NHDGELLLLDFGCKWEKILEGIGFKPSKISGALLTHQHMDHAKCYK 65 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 L I +Y + +H F + +P Sbjct: 66 ELMSVG------IPIYTNDETAEH--------FDVVAGER-----------MMGIPEGQW 100 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLII-- 206 + G + IP+ H + + + + Y TD P ++ + + FLI Sbjct: 101 LSIGNFKVIPLYVPHDGVPNYMYLIKIPDGQLMMYATDFMYLP-KTFKGMHISTFLIECN 159 Query: 207 --------DALKNGLHSS-HFSLSESLKKIELINP---KNAILTHMH 241 DA+ H SL I KN IL H+ Sbjct: 160 HLDADPEKDAVNYKHSIKGHSSLDVVKNVIRANRTELMKNVILCHIS 206 >gi|212531879|ref|XP_002146096.1| tRNA processing endoribonuclease Trz1, putative [Penicillium marneffei ATCC 18224] gi|210071460|gb|EEA25549.1| tRNA processing endoribonuclease Trz1, putative [Penicillium marneffei ATCC 18224] Length = 1120 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 97/303 (32%), Gaps = 94/303 (31%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV- 68 LG G+S P R S+ ++ ++D G + Q+ Sbjct: 669 LGTGSSS----------------PSKHRNVSATLLNVPG----KGYYLLDCGENTLGQLK 708 Query: 69 -------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLK---------------- 101 RE + ++ + +H HADH G I Sbjct: 709 RTYPPEQFREVMQNLRMIWISHMHADHHLGSVAVIREWYEVNYGARSGSEMPSENIADIL 768 Query: 102 QKRPIDVYAAPDCMKHLF-----ESFRY-------CFKALDDRTYPPIVNPIVIENND-- 147 +++ + V +++L E F Y DR Y +V + Sbjct: 769 KQKRLAVVGESMYIQYLEEYSGVEDFGYEKTLPLSVLPPTRDRPYTSVVYRYTRPDGTSK 828 Query: 148 -----------------VPICMKSAGGVIEAIPILQQHGRISSLGFRFG-----NVAYCT 185 + +++A G+ + H R ++G V+Y Sbjct: 829 DDAQNSAYIRFDSTENYLSGLLRAATGLTGLNAVFVNHCR-HAMGLTLEWEDGFKVSYSG 887 Query: 186 DVNAFPAESLEKL-QNLDFLIIDA-LKNGLH-----SSHFSLSESLKKIELINPKNAILT 238 D P+++ ++ ++ LI +A ++ LH H ++SE++ +N K +LT Sbjct: 888 DCR--PSKNFAEMGKDSTLLIHEATFQDDLHGQAVAKKHSTISEAIAVGSWMNAKTVLLT 945 Query: 239 HMH 241 H Sbjct: 946 HFS 948 >gi|189425749|ref|YP_001952926.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422008|gb|ACD96406.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 256 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 63/229 (27%), Gaps = 69/229 (30%) Query: 52 SNTTVIVDTGPDF-----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + SI AVL TH H DHI ++ + Sbjct: 20 GGVRLLIDAGLSLKEITTRLTDSALDPESIHAVLVTHEHIDHI-----RSAGSFARRYKV 74 Query: 107 DV---YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 V YA + Y + E + I P Sbjct: 75 PVLVSYATRQAAER----------------YLQKTQLVEFETG-----YSFSFRNIMIDP 113 Query: 164 ILQQHGRISSLGF----RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 H +GF R G TD+ EKL+ L +++ L NG Sbjct: 114 FPVSHDCCDPVGFVLESREGRTGSATDLGIVTRLVREKLKGCRTLNLESNHDPEMLLNGP 173 Query: 214 HS-----------SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 + H S ESL+ + DL ++ + Sbjct: 174 YPWNLKQRIKSRHGHLSNQESLELL--------------HDLAHEGLEA 208 >gi|116873599|ref|YP_850380.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742477|emb|CAK21601.1| metallo-beta-lactamase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 205 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +IVD G + ++ ++ +D A+L TH H DHI ++ +R + I Sbjct: 22 DNLALIVDPGDE--ASKIKAEITKLDVKPVAILLTHCHYDHIGALEEIRTTYH-----IP 74 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY +P ++ + S + I P E ++ + P Sbjct: 75 VYVSP--LEQEWLSNPDLNLSAHVSGKAIIAEPAEYEFTLGDYNIEGFIFKVVPTP---G 129 Query: 168 HGRISSLGFRFGNVAYCTD 186 H I S+ F F D Sbjct: 130 HS-IGSVSFIFDEFVVVGD 147 >gi|37678556|ref|NP_933165.1| hypothetical protein VV0372 [Vibrio vulnificus YJ016] gi|37197296|dbj|BAC93136.1| conserved hypothetical protein [Vibrio vulnificus YJ016] Length = 446 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 45 SRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S R + +++D G D + V IDA++ TH H DHI I + L Sbjct: 15 SCHEFRAAGIALLIDCGLFQGKDARPPEVDFPVKHIDALVLTHAHIDHIGRI----PWLL 70 Query: 101 KQKRPIDVYAAPDCMK 116 +Y + Sbjct: 71 AAGFSGSIYCTEATAE 86 >gi|323701493|ref|ZP_08113166.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] gi|323533502|gb|EGB23368.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] Length = 332 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 69/230 (30%), Gaps = 47/230 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL-RGYFLKQK-RPID 107 + VD GP ++ + + +ID V +H H DH G + + G R Sbjct: 67 DGLRLYVDPGPGAVVRAEQAGIDLGTIDGVYVSHGHLDHYAGAEAVIEGMCWGMFSRRGY 126 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 + A ++ +Y + ++ + P+ +K A +P+ Sbjct: 127 LLAPGQVLERDRLLSKYHQGLQPTKMGYKGGPTVIPLQSFNPVTIKGA----TIMPVPVH 182 Query: 168 HGRISSLGFRFG----NVAYCTDVNAF-----PA----------------------ESLE 196 H + GF + Y +D N P + E Sbjct: 183 HAE-ENYGFILKTGSITIGYTSDTNYIKSYASPDGIKEMPVRGPIMDMIDIVDYRRDIKE 241 Query: 197 KLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 +D LI + + H + L ++ K LTH + Sbjct: 242 CFSQVDVLIANVTGHNVYAHRHITTLGLP---HLLKDGKVKLCFLTHFNH 288 >gi|317026366|ref|XP_001389493.2| tRNA processing endoribonuclease Trz1 [Aspergillus niger CBS 513.88] Length = 1195 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 102/332 (30%), Gaps = 107/332 (32%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R S+ ++ ++D G + Sbjct: 708 EIITLGTGSSA----------------PSKYRNVSATLLNVPG----YGYYLLDCGENTL 747 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + ++ + +H HADH G Sbjct: 748 GQLKRVFSPEKLREVLQNLRMIWISHLHADHHLGTASVIKAWFQENYPEGIPQTDEVEMD 807 Query: 92 ----IDGLRGYF------------------LKQKRPIDVYAAPDCMK-HLFESFRYCFKA 128 + R + + I + A+P + ++ F Y Sbjct: 808 MSKILKEKRLFVVSEQMMKGWLEEYAAVENYGFGKVIPLSASPYLHQGNIRTQFVYRH-C 866 Query: 129 LDDRTYP--------PIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR-------I 171 D +YP P + + P+ ++ A G+ + + H R + Sbjct: 867 RGDGSYPGHQLDATRPATTSLSFHDQSSPLTSLLREATGLSDLLTTRVSHCRGAMAVSLV 926 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG------LHSSHFSLSESL 224 GF+ ++ D P+ + +N LI +A + H +LSE+L Sbjct: 927 FPDGFKI---SFSGDCR--PSAGFATIGRNSTVLIHEATFQDDMAVSAIAKKHSTLSEAL 981 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 + L+N + +LTH ++ PSR Sbjct: 982 EVGRLMNARAILLTHFSQRYQKLARVEEAPSR 1013 >gi|320587678|gb|EFX00153.1| tRNA processing endoribonuclease [Grosmannia clavigera kw1407] Length = 991 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 97/317 (30%), Gaps = 83/317 (26%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV- 68 LG G+++ P R S+ + + + D G + + Sbjct: 677 LGTGSAM----------------PSKYRNVSATLVRVPG----VGSYLFDCGENTLGSMR 716 Query: 69 -------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRPID---VYAAPDC 114 L + + + + +H HADH G I R ++ + + A+ Sbjct: 717 RMLGAAGLADMLRDLRMIWISHLHADHHLGTASVIRAWRDATQRRDGTAESRLLVASHVN 776 Query: 115 MKHLFESF----RYCFKAL------DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 M H + Y F+ L Y + P+V+ + + I+A + Sbjct: 777 MLHWLREYAEVEDYGFERLRLAELDSSARYERVCPPVVLSAAE---TAEFGLQRIDACRV 833 Query: 165 LQQHGRISSL---GFRFG--------------NVAYCTDVNAFPAESLEKLQNLDFLII- 206 HG ++ + R VAY D P+ ++ L+I Sbjct: 834 EHCHGALAVVVTWPVRSNANTPNTPNTPAEPLRVAYSGDCR--PSADFARIGRHATLLIH 891 Query: 207 -----DALK-NGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD--------YDMVLKS 252 D L H ++ E+L + + +LTH D Sbjct: 892 ESTFDDELAGEAAAKKHSTMGEALAVGRRMAARRVLLTHFSQRYPKIPVFGADGDGDGDP 951 Query: 253 TPS-RVVPAFDGMQFSS 268 TP V+ AFD M+ Sbjct: 952 TPDMHVLVAFDHMRVRL 968 >gi|256423978|ref|YP_003124631.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] gi|256038886|gb|ACU62430.1| beta-lactamase domain protein [Chitinophaga pinensis DSM 2588] Length = 273 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 53/228 (23%) Query: 56 VIVDTGPDFYM---QVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G ++ R + + A+ +H H+DHI G++ L +K + VY Sbjct: 26 VLIDAGISCRETERRMKRLGLKMDIVKAIFISHEHSDHIRGLE-----VLSKKYSLPVYI 80 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 M H +N G + + H Sbjct: 81 TEKTMLH------------------GGLNLHADNVKVFDEATPVIIGTLTVHAFSKAHDA 122 Query: 171 ISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 I F + TD+ + + + ++A L+ G + Sbjct: 123 IEPHSFMITADEICIGVFTDIGVPCSNLIRHFKQCHAAFLEANYDEKMLEQGRYPFFLKK 182 Query: 216 ------SHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRV 257 H S +++L+ + P A +TH+ L + + P V Sbjct: 183 RIRGGKGHLSNTQALEVFKAHKP--AYMTHL--LLSHLSRDNNNPELV 226 >gi|255323626|ref|ZP_05364756.1| ribonuclease J [Campylobacter showae RM3277] gi|255299340|gb|EET78627.1| ribonuclease J [Campylobacter showae RM3277] Length = 707 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 22/161 (13%) Query: 38 TRSSLKI-----SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 T +S I S SE +++ PDF +R+ I V+ TH H DHI + Sbjct: 179 TDTSAIIVDIGMSFPSESMHGVDILI---PDF--DYVRKIKDKIKGVVITHAHEDHIGAV 233 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI--VNPIVIENNDVP- 149 YF K+ + +YA P + + F + + + P +I + +V Sbjct: 234 ----PYFYKEFK-FPIYATPLPLGMINNKFEEHGLKQERSLFRSVEKRKPYLIGDFEVEW 288 Query: 150 ICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTD 186 I + + A+ I + G I G F+ + Y TD Sbjct: 289 IHITHSIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTD 329 >gi|224372796|ref|YP_002607168.1| RNA-metabolising metallo-beta-lactamase [Nautilia profundicola AmH] gi|223588644|gb|ACM92380.1| RNA-metabolising metallo-beta-lactamase [Nautilia profundicola AmH] Length = 466 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 10/73 (13%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +++D G + L IDA++ TH H DH+ I KQ Sbjct: 24 DTGKSKILIDCGMFQGLNEHLNYEPLGFDPKEIDALIITHGHLDHVGRI----PLLYKQG 79 Query: 104 RPIDVYAAPDCMK 116 V+A P Sbjct: 80 FRGKVFAHPATFD 92 >gi|255591220|ref|XP_002535469.1| conserved hypothetical protein [Ricinus communis] gi|223523017|gb|EEF26916.1| conserved hypothetical protein [Ricinus communis] Length = 218 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 37/198 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 + + +DA+L TH H+DHI G+ + +K +D+YA L + K Sbjct: 18 IDRKPEDLDAILITHEHSDHIKGVG-----VMARKYHLDIYANEKTW-QLMDECNMLGKL 71 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + G ++ H I +R + Sbjct: 72 DASQK------------HIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVML 119 Query: 185 TDVNAFPAE-SLEKLQNLDFLIIDALKNGLHSSHFSLSE-SLKKIELI--NPKNAILTHM 240 TD + +L I+ L H S + + I + N K L H+ Sbjct: 120 TDTGYVSDRMTGSYPWSLKQRILSDL------GHLSNEDGAGAMIRSLGYNTKKIYLGHL 173 Query: 241 H-----VDLDYDMVLKST 253 +L + ++ Sbjct: 174 SKENNIKELAHMTMVNQL 191 >gi|52425001|ref|YP_088138.1| GloB protein [Mannheimia succiniciproducens MBEL55E] gi|81609566|sp|Q65U07|GLO2_MANSM RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|52307053|gb|AAU37553.1| GloB protein [Mannheimia succiniciproducens MBEL55E] Length = 236 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 ++AVL TH H DH G++ L+ Y+ I VY + Sbjct: 44 QLEAVLLTHYHDDHTGGVEELKRYY----PDIPVYGPAETAD 81 >gi|15843418|ref|NP_338455.1| hypothetical protein MT3903 [Mycobacterium tuberculosis CDC1551] gi|13883786|gb|AAK48269.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] Length = 338 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 37 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 92 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 93 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 152 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 153 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 211 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 212 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 270 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 271 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 304 >gi|117925743|ref|YP_866360.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1] gi|117609499|gb|ABK44954.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1] Length = 871 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 33/145 (22%) Query: 57 IVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 ++D GP+ Y + V I+ + +TH H DH GI L ++ R + +A P Sbjct: 256 LIDAGPNLYSNLSALGVVVDEIEGIFHTHAHDDHFCGITTL----MRAGRRLKYFATPAV 311 Query: 115 MKHL-----------FESFRYCFKALD----------DRTYPPIVNPIVIENNDVPI--- 150 + E F F+ D PI +P +E Sbjct: 312 RATVQRKLGALLSMEHERFTDFFEIHDLQQGCWNNLQGLEVKPIFSPHPLETTIFQFRAL 371 Query: 151 ---CMKSAGGVIEAIPILQQHGRIS 172 K + + + HG I Sbjct: 372 WHEGYKVYAHYADIVSLKVLHGMIE 396 >gi|322412699|gb|EFY03607.1| hypothetical protein SDD27957_10090 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 560 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 17/107 (15%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + L++ Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLTLALIR-------GKLEE 112 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +++ + + H LG Sbjct: 113 HGL-----WRDATVHEINHNTELTFKNMSVTFFRTTHSIPEPLGIVI 154 >gi|297243755|ref|ZP_06927685.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis AMD] gi|296888176|gb|EFH26918.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis AMD] Length = 673 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 21/135 (15%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 149 LLIDCGVLFPEEEQPGVDLILPDF--HYIQDRLDKVEALVLTHGHEDHIGGV----PYLL 202 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V N I + + Sbjct: 203 KMRPDIPLIGSKLTLAFVEAKCKEHHIDPELIRVEGRDKMKVGPFNLEFITVTHSIPDAL 262 Query: 161 AIPILQQHGRISSLG 175 A+ + G + G Sbjct: 263 AVCVKTPAGTLIDTG 277 >gi|298208629|ref|YP_003716808.1| ribonuclease Z [Croceibacter atlanticus HTCC2559] gi|83848552|gb|EAP86421.1| ribonuclease Z [Croceibacter atlanticus HTCC2559] Length = 301 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 12/132 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPID 107 +N V++D G + + ++ I+ + +H H DH +G+ GL F LK+++ + Sbjct: 27 NNQMVLIDCGEGTQTALRKNKIRFSRINHIFISHLHGDHFYGLIGLISTFSLLKREKDLH 86 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++ + + + L + +E+ + ++++IP+ Sbjct: 87 IFGPKGLKEIILLQLK-----LSKSWTNFKLLFHELESKASETILTHEKFLVQSIPLKH- 140 Query: 168 HGRISSLGFRFG 179 R+ + GF F Sbjct: 141 --RVYTNGFLFK 150 >gi|238790136|ref|ZP_04633913.1| Hydroxyacylglutathione hydrolase [Yersinia frederiksenii ATCC 33641] gi|238721805|gb|EEQ13468.1| Hydroxyacylglutathione hydrolase [Yersinia frederiksenii ATCC 33641] Length = 251 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 VIVD G + +L + A+L TH H DH+ G+ LR + I V Sbjct: 19 DSQKHCVIVDPGEAHPVLAMLNQGDYLPQAILLTHHHNDHVGGVAELR----RHYPNIPV 74 Query: 109 YAAPDCMK 116 Y + Sbjct: 75 YGPQETAN 82 >gi|170781832|ref|YP_001710164.1| hypothetical protein CMS_1437 [Clavibacter michiganensis subsp. sepedonicus] gi|169156400|emb|CAQ01548.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 216 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 51/178 (28%), Gaps = 56/178 (31%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPI-------DVYAAPDCMKHLFESFRYCFKAL 129 DA++ TH H DH + +Q + I +YA Sbjct: 42 DAIVITHEHPDH---------WTPEQLKRILDRNEGVPIYAPEGVAAA------------ 80 Query: 130 DDRTYPPIVNPIVIENNDV----PICMKSAGGVIEAIPILQQHGRISS---LGFRFGN-V 181 + V+ D P ++ GG H I LG + Sbjct: 81 -----AGDFDVTVVHAGDTVEAGPFTLRFFGGT-----HAVIHDSIPVVDNLGVLVNETL 130 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y D P ++D L A +SES+ + + P+ A TH Sbjct: 131 YYAGDSFTIPEGV-----DVDLLAAPAGAPW-----MKISESIDYVLAVKPRRAFPTH 178 >gi|56130673|ref|YP_145576.1| putative hydrolase [Ralstonia metallidurans CH34] gi|56068664|emb|CAI11228.1| putative hydrolase [Cupriavidus metallidurans CH34] Length = 371 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 94/329 (28%), Gaps = 114/329 (34%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG G P W CD SS + + +VD G Sbjct: 21 RLVLLGT---AGGPVW---WPNCDREGI------SSALVV------GDAVYVVDCGDGVG 62 Query: 66 MQVLREQVLS------------IDAVLYTHPHADHIHGIDGLRGYFLKQK-----RPIDV 108 + + + + + TH H+DH L + +P+ V Sbjct: 63 KRYKQAGLGQNNLVSGMSGMENLRGIFLTHLHSDHTVDYFNLFLFGWYNGLTGVKQPVHV 122 Query: 109 YAAP---------------------------------DCMKHLFESFR----YCFKALDD 131 Y D +L+++F + Sbjct: 123 YGPGPRGQLEPIFTPPGQPPRKEPALVNPENPTPGTVDMTNYLYQAFAVDINDRLRDAGR 182 Query: 132 RTYPPIVNPIVIENNDVP--------------ICMKSAGGVIEAIPILQQHGRI-SSLGF 176 + ++ I+ +P + + L H I + + Sbjct: 183 QDLRDLIKVHDIKLPHIPGFKSPNETPEPEMAPFVVHEDDRVRVSATLVNHFPIWPAYAY 242 Query: 177 RF----GNVAYCTDVNAFPAESLEKL-QNLDFLI--------IDALKNGL---------- 213 RF G+V + D P+++L +L ++ D L+ +DAL Sbjct: 243 RFDTDDGSVVFSGDTC--PSKNLIRLAKDADVLVHEVIDVAWVDALFPPPVTAKEEAFKN 300 Query: 214 H--SSHFSLSESLKKIELINPKNAILTHM 240 H SSH S+ + K E K +L+H+ Sbjct: 301 HLLSSHTSIDDVGKVAEAAGAKTLVLSHI 329 >gi|88860340|ref|ZP_01134978.1| metallo-beta-lactamase family protein [Pseudoalteromonas tunicata D2] gi|88817538|gb|EAR27355.1| metallo-beta-lactamase family protein [Pseudoalteromonas tunicata D2] Length = 324 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHA 86 NP R S+ + + T ++VD G ++L+ + ++A+ TH H Sbjct: 9 SSGNPSKYRNVSATAVQFERYK---TWLLVDCGDGTQQKILQAGLPLYHLNAIFITHTHG 65 Query: 87 DHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFES 121 DH G+ GL R + + A + + + Sbjct: 66 DHCFGLPGLLSSVSIAGRKLPLLLLAPQSVIDFVLHA 102 >gi|312867561|ref|ZP_07727769.1| ribonuclease J 1 [Streptococcus parasanguinis F0405] gi|311096967|gb|EFQ55203.1| ribonuclease J 1 [Streptococcus parasanguinis F0405] Length = 560 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRDA 118 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I ++ ++ I + H G+I G F+F Sbjct: 119 KLYE-INQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFD 169 >gi|260642729|ref|ZP_05859513.1| ribonuclease Z [Bacteroides finegoldii DSM 17565] gi|260620826|gb|EEX43697.1| ribonuclease Z [Bacteroides finegoldii DSM 17565] Length = 312 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPKGLEELF 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + + E + + IP+ RIS GF F Sbjct: 101 APMLAFFCKTLTYKVF-----FHEFETKEPTQIYDDRSVTVTTIPLKH---RISCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|257458153|ref|ZP_05623307.1| metallo-beta-lactamase protein [Treponema vincentii ATCC 35580] gi|257444447|gb|EEV19536.1| metallo-beta-lactamase protein [Treponema vincentii ATCC 35580] Length = 692 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 27/88 (30%), Gaps = 18/88 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHADH 88 +L SE+ +VD G Q + I AV TH HADH Sbjct: 25 CTLLEYSNSEKDICNYYLVDCGE---YQEINHNYIDNKKRVLSLAKKIRAVFLTHAHADH 81 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 I + L + +Y M Sbjct: 82 IGLLPDLIDNGFSGR----IYCTRATMD 105 >gi|167034630|ref|YP_001669861.1| ribonuclease Z [Pseudomonas putida GB-1] gi|189043788|sp|B0KMS1|RNZ_PSEPG RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|166861118|gb|ABY99525.1| Ribonuclease Z [Pseudomonas putida GB-1] Length = 319 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 21/95 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S GVP K R ++ I +VD G Sbjct: 1 MDLLFLGT--SAGVPT-------------KARNVSATAVIETNGSHW----YLVDCGEGT 41 Query: 65 YMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRG 97 ++L + + A+ TH H DH G+ GL Sbjct: 42 QHRLLHTPLSIRDLRAIFITHVHGDHCFGLPGLLA 76 >gi|15902169|ref|NP_357719.1| hypothetical protein spr0125 [Streptococcus pneumoniae R6] gi|15457664|gb|AAK98929.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 610 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 115 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 162 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 163 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 217 Query: 188 N 188 Sbjct: 218 K 218 >gi|322390305|ref|ZP_08063834.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321143036|gb|EFX38485.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 560 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRDA 118 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I ++ ++ I + H G+I G F+F Sbjct: 119 KLYE-INQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFD 169 >gi|255015856|ref|ZP_05287982.1| ribonuclease Z [Bacteroides sp. 2_1_7] Length = 270 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 94/288 (32%) Query: 57 IVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG----------YFLKQKR 104 ++D G +Q+ +R + ++ + +H H DH G+ GL + + Sbjct: 1 MIDCGEGTQVQMRRMRIKFSRLNHIFISHLHGDHCFGLPGLISTLGMLGRNGELVIHGPK 60 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I+ Y P + + F + P + +I+ + M+ + +IP+ Sbjct: 61 EIESYMRP-----ILDIF--------CKGLPYEIRFNLIDPTTHSLVMEDRSLSVYSIPL 107 Query: 165 LQQHGRISSLGFRF---------------------------------------------- 178 RI G+ F Sbjct: 108 KH---RIPCCGYLFAEKAKEAHIIREMTDFYQVPVRMMQEIKRGADFVTPEGEVIPNARL 164 Query: 179 -------GNVAYCTDVNAFPAESLEKLQNLDFLI-------IDALKNGLHSSHFSLSESL 224 AYC+D AF + ++ +D L DA + + H + ++ Sbjct: 165 TRPAVAPKRYAYCSDT-AFHPSIIPIIEGVDLLYHEATFAECDAARAKE-TFHSTARQAA 222 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAF----DGMQFSS 268 + K ++ H + LK ++ P +GM+ S Sbjct: 223 EIAYKAQVKRLVIGHYSARYEDMAPLKKEADKIFPGTILGEEGMRLSV 270 >gi|27364220|ref|NP_759748.1| Metallo-beta-lactamase family protein, RNA-specific [Vibrio vulnificus CMCP6] gi|27360338|gb|AAO09275.1| Metallo-beta-lactamase family protein, RNA-specific [Vibrio vulnificus CMCP6] Length = 446 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 45 SRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S R + +++D G D + V IDA++ TH H DHI I + L Sbjct: 15 SCHEFRAAGIALLIDCGLFQGKDARPPEVDFPVKHIDALVLTHAHIDHIGRI----PWLL 70 Query: 101 KQKRPIDVYAAPDCMK 116 +Y + Sbjct: 71 AAGFSGSIYCTEATAE 86 >gi|23465758|ref|NP_696361.1| hypothetical protein BL1192 [Bifidobacterium longum NCC2705] gi|23326444|gb|AAN24997.1| widely conserved hypothetical protein with metallo-beta-lactamase domain [Bifidobacterium longum NCC2705] Length = 637 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 109 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 162 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + + + V P +E +V + A Sbjct: 163 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 222 Query: 157 GVIEAIP 163 V P Sbjct: 223 AVYVKTP 229 >gi|17231060|ref|NP_487608.1| hypothetical protein all3568 [Nostoc sp. PCC 7120] gi|17132701|dbj|BAB75267.1| all3568 [Nostoc sp. PCC 7120] Length = 299 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 71/211 (33%), Gaps = 35/211 (16%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +I D G Q L++ + + + +T+ ++ I G F+ Sbjct: 61 AGKRLIFDGGTGLRILGKAWQHLQQPLEA--HLFFTNSQSNRIQGFPFFAPAFIA-GNCF 117 Query: 107 DVYAAPDC-----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +Y + L + YP V ++ + + + Sbjct: 118 HIYGGAASNGASIKQCLCDQM-----LQPHFPYPLQVMQSELQFYPLTPDSEVKLDDVTI 172 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVN-----AFPAESLEKLQNLDFLIIDALKNG 212 L + S+G+R +VAY TD+N + L+ +Q++D LI +A Sbjct: 173 RTALINQTQ-RSIGYRVTWQEYSVAYVTDLNMSAEQGEREQVLQIIQDVDLLIANAT-YT 230 Query: 213 LHSSHFS------LSESLKKIELINPKNAIL 237 +SH +++ + + I+ Sbjct: 231 PPTSHDHESVDLLWQAAVEMAQKAGVRKLII 261 >gi|302342037|ref|YP_003806566.1| beta-lactamase domain protein [Desulfarculus baarsii DSM 2075] gi|301638650|gb|ADK83972.1| beta-lactamase domain protein [Desulfarculus baarsii DSM 2075] Length = 265 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 87/287 (30%), Gaps = 63/287 (21%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T+LG G C NP R+ + + +++D G + Sbjct: 9 LTVLGSG--------------CAELNP--ARSAPAYLLQL-----GPHALLLDLGQGAWR 47 Query: 67 QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL--------KQKRPIDVYAAP---D 113 + V I AVL +H H DH + L K I + P D Sbjct: 48 GLAATGVDAQQITAVLLSHQHPDH---LADLLPLLFALNYDPRLKAGARITLVGHPGLAD 104 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L F + PP + +E ++ AG + H + S Sbjct: 105 VLAGLEAVFGH-----WLAWGPPTLLARWLEPGQ---GLELAGARLSTA--KSAHTAM-S 153 Query: 174 LGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKI 227 L +R + Y D A A +E ++ L+ + H + Sbjct: 154 LAYRLDWAGRGLVYLGDCQA-SAALVELARDAALLVAHCAGTETNPKPGHMPPEACGELA 212 Query: 228 ELINPKNAILTHMHVDLDYDMVLKST------PSRVVPAFDGMQFSS 268 K+ +L+H + D + + P + A D M+ + Sbjct: 213 AAAGVKSLLLSHFRAEDDPEAARAAAGRLFGGP--IWAAHDLMRLAV 257 >gi|149178970|ref|ZP_01857545.1| ribonuclease Z [Planctomyces maris DSM 8797] gi|148842169|gb|EDL56557.1| ribonuclease Z [Planctomyces maris DSM 8797] Length = 482 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 23/187 (12%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRG 97 +S+ + + D G + QV + I+ + +H H+DH + + Sbjct: 111 TSILVELGNGESQPRRFFFDLGNGSISNAIAMQVPAPLINDIFISHLHSDHFADLPYMYP 170 Query: 98 Y--FLKQKRPIDVYA-----APDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVP 149 + F P+ VY MKH+ + R + ++ PI + + IE + Sbjct: 171 FRAFSGGYTPLRVYGPSGRTPELGMKHMIKHMREMNRWHEENFNACPIGDGMEIEVTEFD 230 Query: 150 ICMKSAGG----VIEAIPILQQHGRISSLGFRFG------NVAYCTDVNAFPAE-SLEKL 198 ++ ++ + H + + +R + + D P E S + Sbjct: 231 WKEENGICYDKDGVKVRHWPRSHVKDGASAYRLDWEDAGLSFVWTGDGR--PDELSAKYG 288 Query: 199 QNLDFLI 205 + +D + Sbjct: 289 KGVDVFV 295 >gi|78778283|ref|YP_394598.1| hypothetical protein Suden_2089 [Sulfurimonas denitrificans DSM 1251] gi|78498823|gb|ABB45363.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 647 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 73/220 (33%), Gaps = 54/220 (24%) Query: 53 NTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N ++VD G F + +RE I AV+ TH H DHI + + Sbjct: 122 NEAILVDVGMSFPDEDMHGVDILVPDFTYIREIKDKIKAVIITHAHEDHIGAMP-----Y 176 Query: 100 LKQKRPIDVYAAPDCMKHL--------FESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 L ++ ++ +P + + + F+ F ++ R I N IE + Sbjct: 177 LYKEMQFPIFGSPLPLAMIAGKFDEHHIKEFKQFFNPIEKRKTYKIGNDFEIEWMHMTHS 236 Query: 152 M---------KSAGGVIEAIPILQQHGRISSLGFRFG--NVAYCTDVNAFPAESLEKLQN 200 + SAG VI H G+ +AY D + Sbjct: 237 IIDSSSLAITTSAGTVIHTGDFKIDH--TPVDGYTADLHRLAYYGD------------KG 282 Query: 201 LDFLIIDAL---KNGLHSSHFSLSESLKKIELINPKNAIL 237 + L+ D+ S S++ +L ++ IL Sbjct: 283 VLCLLSDSTNSYNTAPTPSELSVAPALDRVFSKAEGRVIL 322 >gi|87200976|ref|YP_498233.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87136657|gb|ABD27399.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 292 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 65/192 (33%), Gaps = 24/192 (12%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGI 92 +SL + G V+VD P +R +D A++ TH H DH G+ Sbjct: 32 PASLVANISLITGEKEAVLVDV-PFTRADAMRVAAEVLDSGKTLKAIVITHDHPDHFFGL 90 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL--------DDRTYPP---IVNPI 141 D L+ F K + A P + + S FK R P + I Sbjct: 91 DVLQDAFPDAK----ILANPVAARDMARSIPIKFKRWAAQLGTNAPRRGVQPDAMQGDTI 146 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL 201 +E + + + G + + + R G N Y PA+ L+ L Sbjct: 147 ELEGHKLQVIGPMQGDHVHSTVLWDAETRTLIAGDVLFNGVYVWLGEHGPAQYEAWLRTL 206 Query: 202 DFLIIDALKNGL 213 D L +AL Sbjct: 207 DRL--EALNPAR 216 >gi|325959399|ref|YP_004290865.1| RNA-metabolising metallo-beta-lactamase [Methanobacterium sp. AL-21] gi|325330831|gb|ADZ09893.1| RNA-metabolising metallo-beta-lactamase [Methanobacterium sp. AL-21] Length = 497 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 29/137 (21%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC---------------- 114 E S+D VL +H H DH+ Y + I ++ + + Sbjct: 83 EPEPSVDGVLLSHSHVDHV-------AYVHHLREDIPIFLSQESYLILRALEETGASAFS 135 Query: 115 -MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 HL ++F + Y + + + V + G H + Sbjct: 136 EYLHLKKTF-HMGPTKKGDGYKRLKLAVERDIRIVKPYKPFSIGDFSIKSAPVDHSLPGA 194 Query: 174 LGFRFGN----VAYCTD 186 G+ N V Y D Sbjct: 195 SGYIAVNDEETVVYTGD 211 >gi|256832265|ref|YP_003160992.1| beta-lactamase domain-containing protein [Jonesia denitrificans DSM 20603] gi|256685796|gb|ACV08689.1| beta-lactamase domain protein [Jonesia denitrificans DSM 20603] Length = 561 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 40/181 (22%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF + +++ +DA++ TH H DHI G+ Sbjct: 40 GGRLLIIDCGVLFPEDHQPGVDLILPDF--SYIADRMDDVDAIVLTHGHEDHIGGV---- 93 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+ +R + + + + + K + R P + E I Sbjct: 94 PYLLRLRRDVPIIGSKLTLAFIEA------KLKEHRITPTTIEVKEGEKLSRGIFDLEFV 147 Query: 157 GVIEAIP------ILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKLQNLDFLII 206 V +IP + GR+ G F+ + TD+ AF E +D ++ Sbjct: 148 AVNHSIPDALAVAVSTPAGRVLHTGDFKMDQLPLDGRITDLRAFARLGEE---GVDLFMV 204 Query: 207 D 207 D Sbjct: 205 D 205 >gi|254526119|ref|ZP_05138171.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] gi|221537543|gb|EEE39996.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9202] Length = 657 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 70/232 (30%), Gaps = 57/232 (24%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F L+ + ++ TH H DHI GI Sbjct: 43 GDDIILIDGGLAFPSDGMHGVNVVMPDTTYLQANLHRFRGMIVTHGHEDHIGGISH---- 98 Query: 99 FLKQKRPID-VYAAPDCMKHLFESFRYC-------FKALDDRTYPPIVNPIVIENND--- 147 +K I +Y P M L + ++ R + IE Sbjct: 99 -HLKKFRIPVIYGPPLAMSMLKGKMEEAGVADRTTIQTIEPRQVVKLGQNFSIEFIRNTH 157 Query: 148 -----------VPICMKSAGGVIEA--IPILQQHGRISSLGFRF--GNVAYCTD-----V 187 P+ + G + +P +H I + + G + +D V Sbjct: 158 SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERMVYYGEKGVLCLLSDSTNSEV 217 Query: 188 NAFPAESLEKLQNLDFLIIDA-----LKNGLHSSH---FSLSESLKKIELIN 231 F + NLD LI +A L S+H + ++K I Sbjct: 218 KGFVPSEISVFPNLDRLISEAKGRVMLTTFASSTHRVAMVIQLAIKHGRKIG 269 >gi|313674293|ref|YP_004052289.1| zn-dependent hydrolase of the beta-lactamase fold family [Marivirga tractuosa DSM 4126] gi|312940991|gb|ADR20181.1| Zn-dependent hydrolase of the beta-lactamase fold family [Marivirga tractuosa DSM 4126] Length = 370 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 64/213 (30%), Gaps = 50/213 (23%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL--FESFRYCFKA 128 E + ++AV+ +H H DH + +K + + Y Sbjct: 148 EDLPELEAVVISHDHYDH---------------------LDYETIKKITAKTKYFYVPTG 186 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---------- 178 + V I+ G I A P GR+ S F Sbjct: 187 VKASLEYWGVPTEKIKEFSWWDTHTENGISITATPARHFSGRLFSQNNTFWASWVIEMEG 246 Query: 179 GNVAYCTDVNAFP--AESLEKLQNLDFLI--IDALKNGLHSSHFSLSESLKKIELINPKN 234 N+ + D F E EKL D I I A + H H E+++ + + K Sbjct: 247 ENIYFGGDTGIFDGFGEIDEKLGPFDLAIMPIGAYNDAWHDIHMDPIEAIEAFQQMRAKK 306 Query: 235 AILTH-------MH------VDLDYDMVLKSTP 254 H +H +DL+ V K P Sbjct: 307 IFPIHWGTFDLALHSWYEPILDLENQAVEKEIP 339 >gi|296875742|ref|ZP_06899806.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] gi|296433238|gb|EFH19021.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] Length = 559 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRDA 118 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I ++ ++ I + H G+I G F+F Sbjct: 119 KLYE-INQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFD 169 >gi|255513745|gb|EET90010.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 655 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 33/98 (33%), Gaps = 29/98 (29%) Query: 39 RSSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQ------------------VLSIDA 78 RS L + N+ +I+D G P+ ++ L + IDA Sbjct: 203 RSCLLLETP-----NSKIIIDCGISPEPGIKGLDANANQEGNKAFPYIDSANISINEIDA 257 Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 V+ TH H DH+ Y K VY P Sbjct: 258 VILTHGHMDHMG----FVPYLFKYGYEGPVYCTPPTRD 291 >gi|283783595|ref|YP_003374349.1| hypothetical protein HMPREF0424_1150 [Gardnerella vaginalis 409-05] gi|283441783|gb|ADB14249.1| conserved hypothetical protein [Gardnerella vaginalis 409-05] Length = 675 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 21/135 (15%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 151 LLIDCGVLFPEEEQPGVDLILPDF--HYIQDRLDKVEALVLTHGHEDHIGGV----PYLL 204 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + + V N I + + Sbjct: 205 KMRPDIPLIGSKLTLAFVEAKCKEHHIDPELIRVEGRDKMKVGPFNLEFITVTHSIPDAL 264 Query: 161 AIPILQQHGRISSLG 175 A+ + G + G Sbjct: 265 AVCVKTPAGTLIDTG 279 >gi|302542105|ref|ZP_07294447.1| metallo-beta-lactamase [Streptomyces hygroscopicus ATCC 53653] gi|302459723|gb|EFL22816.1| metallo-beta-lactamase [Streptomyces himastatinicus ATCC 53653] Length = 561 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 18/107 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ ID ++ TH H DHI G+ + L++K I + + + + Sbjct: 70 IRDRLDDIDGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALI---------- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + P +E + + G E + H +L Sbjct: 116 -EAKLQEHRIRPYTLEVEEGNLER---IGPFECEFVAVNHSIPDALA 158 >gi|193084111|gb|ACF09778.1| beta-lactamase domain protein [uncultured marine crenarchaeote KM3-153-F8] Length = 422 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 65/188 (34%), Gaps = 36/188 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGL 95 RS+ + + +I+D G + L +DAV+ +H H DH I Sbjct: 14 RSAFLVEI-----EDKKIILDFGIMVKRPTLFPLYTNPKEVDAVILSHAHLDHSGAIPS- 67 Query: 96 RGYFLKQKRPIDVY---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND----V 148 IDVY A+ D K L + F + Y P + + + D V Sbjct: 68 ----FFVSNNIDVYCTSASADISKLLIDDFINL-SNDVTKQYIPFQHLELKKMMDNIKRV 122 Query: 149 PICMKSAGGVIEAIPILQQH----GRISSLGFRFGNVAYCTDVNAFPAESLEKLQN---- 200 + + G I+ I H I G +AY D+NA + +Q Sbjct: 123 ELNQEFEIGNIKIKLINAGHIPGSASIIIEG-EGKRIAYTGDINA---QDSSLVQGADTN 178 Query: 201 ---LDFLI 205 LD LI Sbjct: 179 YGELDLLI 186 >gi|22126973|ref|NP_670396.1| hydroxyacylglutathione hydrolase [Yersinia pestis KIM 10] gi|45442538|ref|NP_994077.1| hydroxyacylglutathione hydrolase [Yersinia pestis biovar Microtus str. 91001] gi|162420794|ref|YP_001607086.1| metallo-beta-lactamase family protein [Yersinia pestis Angola] gi|167424058|ref|ZP_02315811.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|21960016|gb|AAM86647.1|AE013910_9 probable hydroxyacylglutathione hydrolase [Yersinia pestis KIM 10] gi|45437403|gb|AAS62954.1| probable hydroxyacylglutathione hydrolase [Yersinia pestis biovar Microtus str. 91001] gi|162353609|gb|ABX87557.1| metallo-beta-lactamase family protein [Yersinia pestis Angola] gi|167056907|gb|EDR66670.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262361132|gb|ACY57853.1| hydroxyacylglutathione hydrolase [Yersinia pestis D106004] Length = 280 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 A+L TH H DH+ G+ LR I VY + K Sbjct: 77 AILLTHHHNDHVGGVADLR----HHFPDIPVYGPQETAK 111 >gi|261402298|ref|YP_003246522.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus vulcanius M7] gi|261369291|gb|ACX72040.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus vulcanius M7] Length = 634 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 34/193 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIH 90 RS L + +T V++D G + + + +DAV+ TH H DH Sbjct: 193 RSCLYVQTP-----DTRVLIDCGINVACEDKAFPHFDAPEFSIEDLDAVIITHAHLDHCG 247 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + VY + Y A + P + + Sbjct: 248 ----FVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYSSKDIKTCVKHT 303 Query: 150 ICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTD----VNAFPAES 194 I + G + P ++ H LG N+AY D + + Sbjct: 304 IPID-YGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTGDIKFETSRLLEPA 362 Query: 195 LEKLQNLDFLIID 207 + + L+ LII+ Sbjct: 363 VCQFPRLETLIIE 375 >gi|227537735|ref|ZP_03967784.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227242349|gb|EEI92364.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 458 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + +++D G + + + L +V ID VL TH H DH + L +K Sbjct: 25 DTGDRKILIDCGLFQGLKELRLKNWEYLPVEVSKIDVVLLTHGHLDHTGYLPRL----VK 80 Query: 102 QKRPIDVYAAPDCMK 116 Q +Y + Sbjct: 81 QGYNGPIYGTNPTLD 95 >gi|171779196|ref|ZP_02920167.1| hypothetical protein STRINF_01044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282252|gb|EDT47679.1| hypothetical protein STRINF_01044 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 560 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + I ++ TH H DHI GI FL + Sbjct: 36 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRIKGLVITHGHEDHIGGIP-----FLLK 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 91 QANIPIYAGPLALALIKGKLEEHGLLRDAKLYEINANTELTFKNLSVTFFRTTHSIPEPL 150 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 151 GIVIHTP----QGKIVCTGDFKFD 170 >gi|313215870|emb|CBY37291.1| unnamed protein product [Oikopleura dioica] Length = 375 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 30/127 (23%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D T LG P +R ++ R + +VD Sbjct: 1 MSD-LQVTCLGT----------------ASQQPSVKR-----ALNSCVYRNKGISYLVDC 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAP 112 G Q+ V SI VL TH H DH G+ K+ I+VY Sbjct: 39 GEGTQAQLTASGVRPSSIKTVLITHLHGDHCFGLPDTGSLLEAVKKVKYEYPTIEVYGPV 98 Query: 113 DCMKHLF 119 ++L Sbjct: 99 GLRRYLR 105 >gi|152975132|ref|YP_001374649.1| beta-lactamase domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023884|gb|ABS21654.1| beta-lactamase domain protein [Bacillus cytotoxicus NVH 391-98] Length = 557 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 74/215 (34%), Gaps = 52/215 (24%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V+VD G F + L+E I + TH H DHI GI Y LKQ Sbjct: 33 VVVDCGSKFPDESLLGIDLIIPDITYLQENKEKIRGLFVTHGHEDHIGGI----PYILKQ 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I +YA+ + + + + +++ +++ I ++ + Sbjct: 89 LN-IPIYASKLTLGLIELKLKEHHLQNQTK--------LIMVDSESEIELE----TMRLT 135 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN--------AFPAESLEKLQNL---DFLII- 206 H LG F G V + D +P + K+ N+ L + Sbjct: 136 FFKTNHSIPDCLGIAFHTDEGTVVHTGDFKFDLTPVNEQYPD--IHKMANIGEKGVLALL 193 Query: 207 ----DALKNGLHSSHFSLSESLKKIELINPKNAIL 237 +A + G S + E +++ P+ IL Sbjct: 194 SESTNAERAGFSPSERLVGERIEEAFQKAPRKVIL 228 >gi|297196975|ref|ZP_06914372.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|197717505|gb|EDY61539.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 255 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 56/171 (32%), Gaps = 29/171 (16%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI G G + G G + AC +++D G Sbjct: 1 MRVTIAGSGDAFG---SGGRFQACT-----------------HIAPSHAPAILIDCGTTS 40 Query: 65 YMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAAPDCMKHLFE 120 + L + V TH H DH G+ L G F ++ + + P + L E Sbjct: 41 LTALRSLDLDPGEVTLVAVTHLHGDHFGGLPFLVLDGQFRRRTTDLRIIGPPGTRRRLTE 100 Query: 121 SFRYCFK--ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + F + R + +V+ I D + + S G IEA P G Sbjct: 101 TMEALFPGSSTVTRRFTTVVDEI---APDETLSVPSHGLHIEAHPADHSAG 148 >gi|167464294|ref|ZP_02329383.1| Metallo beta-lactamase superfamily hydrolase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 114 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 + T+++D G + Q++ + + +D V+ THP ADHI G+D + Sbjct: 66 NGKTMLIDAGDNDKEQLMLDYMKKYGITKLDIVIGTHPDADHIGGLDKV 114 >gi|71906631|ref|YP_284218.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Dechloromonas aromatica RCB] gi|71846252|gb|AAZ45748.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Dechloromonas aromatica RCB] Length = 470 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 9/84 (10%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDG 94 S + R + GP+ + R V ID VL TH H DH + Sbjct: 15 SCTLVETGDIRFLVDCGMFQGGPEARQKNQRALNFGFDVREIDFVLLTHAHIDHSGLLPR 74 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHL 118 L + +YA P + L Sbjct: 75 LSMLGYRG----PIYATPATIDLL 94 >gi|319892592|ref|YP_004149467.1| Hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] gi|317162288|gb|ADV05831.1| Hydroxyacylglutathione hydrolase [Staphylococcus pseudintermedius HKU10-03] Length = 209 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 16/137 (11%) Query: 56 VIVD-TGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +++D G D + +++ + A+L TH H DHI +D + + + VY + Sbjct: 25 ILIDPAGEIDKIDKKIKQSGKQLIAILLTHAHFDHIAALDDVL-----TRYDVPVYMHAE 79 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L + + D P +I + P + I I H S Sbjct: 80 EFSFLTDPQKNGSAKFKDYGLP------IITSQAEPHALDEGIQRIGQFNIQTLHTPGHS 133 Query: 174 LG---FRFGNVAYCTDV 187 G + F A D Sbjct: 134 PGSLTYVFDEFAVVGDT 150 >gi|315281652|ref|ZP_07870230.1| late competence protein [Listeria marthii FSL S4-120] gi|313614701|gb|EFR88267.1| late competence protein [Listeria marthii FSL S4-120] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|307570485|emb|CAR83664.1| lipoprotein, putative [Listeria monocytogenes L99] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|255023217|ref|ZP_05295203.1| hypothetical protein LmonocyFSL_06695 [Listeria monocytogenes FSL J1-208] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|254852438|ref|ZP_05241786.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] gi|258605747|gb|EEW18355.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503] Length = 356 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|271963803|ref|YP_003337999.1| hydrolase (metallo-beta-lactamase superfamily)-like protein [Streptosporangium roseum DSM 43021] gi|270506978|gb|ACZ85256.1| hydrolase (metallo-beta-lactamase superfamily)- like protein [Streptosporangium roseum DSM 43021] Length = 798 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 G V+VD GPD + LR + + V+ THPH DH+ G+ G F + Sbjct: 558 GPGRAVVVDAGPDPVLMDRCLRSMGIREVPLVILTHPHFDHVGGL---EGIFRGRG 610 >gi|229069339|ref|ZP_04202629.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus F65185] gi|228713826|gb|EEL65711.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus F65185] Length = 417 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G + Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYENGYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|229078971|ref|ZP_04211523.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock4-2] gi|228704385|gb|EEL56819.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus Rock4-2] Length = 417 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G + Y ++ RE V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYENGYPKIEREAVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|217964955|ref|YP_002350633.1| late competence protein [Listeria monocytogenes HCC23] gi|217334225|gb|ACK40019.1| late competence protein [Listeria monocytogenes HCC23] Length = 349 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|300764154|ref|ZP_07074149.1| hypothetical protein LMHG_10128 [Listeria monocytogenes FSL N1-017] gi|300515144|gb|EFK42196.1| hypothetical protein LMHG_10128 [Listeria monocytogenes FSL N1-017] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|226223563|ref|YP_002757670.1| hypothetical protein Lm4b_00965 [Listeria monocytogenes Clip81459] gi|254931328|ref|ZP_05264687.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|225876025|emb|CAS04731.1| unnamed protein product [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293582878|gb|EFF94910.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|328475418|gb|EGF46187.1| hypothetical protein LM220_04196 [Listeria monocytogenes 220] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|126179657|ref|YP_001047622.1| beta-lactamase domain-containing protein [Methanoculleus marisnigri JR1] gi|125862451|gb|ABN57640.1| beta-lactamase domain protein [Methanoculleus marisnigri JR1] Length = 421 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 37/191 (19%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-FYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + T+++D G +V+ V ++D V+ TH H+DHI G+ + Sbjct: 57 SILIEF-----RDKTMLIDAGERGMGERVIAYLDERNVETLDVVVATHAHSDHIGGLSDV 111 Query: 96 RGYFLKQKRPIDVYAAP----DCMKHLF-----ESFRYCFKALDDRTYP-PIVNPIVIEN 145 R +D AA ++L Y P + +++ Sbjct: 112 IS-AYPVGRFVD--AAQPHPTATYENLLVLVEDLGIPYTAAERGQSVALDPDLEILILNP 168 Query: 146 NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 P+ + V+ ++ +G IS L + D ES+ + LD L Sbjct: 169 GAEPLGDINEDSVV----LMVTYGEISYL--------FTGDAGTPAEESMAE-AGLD-LD 214 Query: 206 IDALKNGLHSS 216 D LK G H+S Sbjct: 215 ADVLKVGHHAS 225 >gi|46907177|ref|YP_013566.1| putative lipoprotein [Listeria monocytogenes str. 4b F2365] gi|46880444|gb|AAT03743.1| putative lipoprotein [Listeria monocytogenes serotype 4b str. F2365] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|47093856|ref|ZP_00231599.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858] gi|254823784|ref|ZP_05228785.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|47017765|gb|EAL08555.1| lipoprotein, putative [Listeria monocytogenes str. 4b H7858] gi|293593006|gb|EFG00767.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|308178414|ref|YP_003917820.1| metallo-beta-lactamase superfamily protein [Arthrobacter arilaitensis Re117] gi|307745877|emb|CBT76849.1| metallo-beta-lactamase superfamily protein [Arthrobacter arilaitensis Re117] Length = 266 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 V++D GPD + I VL TH H+DH GID ++ P+ C Sbjct: 50 VLIDPGPDLEDHLQALAAFDIQLVLITHRHSDHTGGID---SFYRMTGAPVRAVLPEFCR 106 Query: 116 KH 117 Sbjct: 107 DA 108 >gi|297156769|gb|ADI06481.1| metallo-beta-lactamase family hydrolase [Streptomyces bingchenggensis BCW-1] Length = 561 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ ID ++ TH H DHI G+ + L++K I + + + + Sbjct: 65 PDF--TCIRDRLDDIDGIVLTHGHEDHIGGV----PFLLREKSDIPLIGSKLTLALI--- 115 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + P +E + + G + + H +L Sbjct: 116 --------EAKLQEHRIRPYTLEVEE---GQRERIGPFDCEFVAVNHSIPDALA 158 >gi|115359148|ref|YP_776286.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115284436|gb|ABI89952.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 287 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 26/154 (16%) Query: 44 ISRVSERGSNTTVIVDTGP--------DFYMQVLREQV--LSIDAVLYTHPHADHIHGID 93 I+ RG+ TV+VDTG + + ID +L TH H DHI G+ Sbjct: 60 INCYVIRGNGRTVLVDTGAGGIRNWGGRLRPSLAHAGIDARDIDTILLTHAHPDHIGGLL 119 Query: 94 G-------LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 + L +R + D + E R F+ I+ Sbjct: 120 DADGQPAFAQAAVLIHERECAFWLDDDAYERASERARVNFQIARRTFDAYRAQLRTIDAG 179 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 DV I A+P+ G+R + Sbjct: 180 DVLPG-------IVAVPLPGHTP--GHTGYRVES 204 >gi|118618938|ref|YP_907270.1| ribonuclease Z [Mycobacterium ulcerans Agy99] gi|166991492|sp|A0PTY0|RNZ_MYCUA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|118571048|gb|ABL05799.1| metal-dependent hydrolase [Mycobacterium ulcerans Agy99] Length = 279 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 61/189 (32%), Gaps = 39/189 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + + +VD G Sbjct: 2 IEITLLGTGSPIPDP---------DRAGP-------STLVRAGGQ-----VFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAP---DC 114 + + AVL TH H+DHI + + + P+ V P + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLQVIGPPGTAET 100 Query: 115 MKHLFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 ++ + ++F Y D PP + E D + + G I P + Sbjct: 101 VEAMLKAFGRDIGYRIAHHADLNAPPPIEVH--EYTDGTVWDRD-GVAIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG 179 ++GFR Sbjct: 157 APTIGFRVE 165 >gi|270010824|gb|EFA07272.1| hypothetical protein TcasGA2_TC014506 [Tribolium castaneum] Length = 733 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 34/184 (18%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G D + + +R V +IDAVL ++P H+ + L G K Sbjct: 26 DEVRILLDCGWDEHFDMEIIKEMRRHVHTIDAVLISYPDVAHLGALPYLVG---KLGLNC 82 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI------------CMKS 154 +YA K F++ + + +++ D +K Sbjct: 83 PIYATIPVYKMGQMFMYDLFQSHYNME---DFDLFTLDDVDATFEKVIQLKYNQSVPLKG 139 Query: 155 AGGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFL 204 G + P+ H G I + + G ++ Y D N LEKLQ Sbjct: 140 KGYGLTITPLPAGHMIGGTIWKI-MKVGEEDIIYANDFNHKKERHLNGCELEKLQRPSLF 198 Query: 205 IIDA 208 I DA Sbjct: 199 ITDA 202 >gi|237715633|ref|ZP_04546114.1| ribonuclease Z [Bacteroides sp. D1] gi|262408642|ref|ZP_06085188.1| ribonuclease Z [Bacteroides sp. 2_1_22] gi|229444342|gb|EEO50133.1| ribonuclease Z [Bacteroides sp. D1] gi|262353507|gb|EEZ02601.1| ribonuclease Z [Bacteroides sp. 2_1_22] Length = 312 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + ++ +P ++ L Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIH-SPRGLEEL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F +T V E + + + IP+ RI GF F Sbjct: 100 FAPMLAFF----CKTLTYKVFFHEFETKEPMLVYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|124267749|ref|YP_001021753.1| hypothetical protein Mpe_A2565 [Methylibium petroleiphilum PM1] gi|124260524|gb|ABM95518.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 255 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 35/170 (20%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D G LR L +D A+ TH H DH+ L ++ Sbjct: 18 EAGATRLLIDCGFTQKELSLRLGRLGLDPPGLTALFITHEHGDHVG-----CALSLARRH 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++ + + + P ++ ++ + A G +E P Sbjct: 73 RLPLWMSRGTWRAI---------------GAPELDDDLLHFVSDGAPV--AVGDLELSPY 115 Query: 165 LQQHGRISSL------GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H L G R + TD + A L LQ+ D L+++ Sbjct: 116 TVPHDAAEPLQLSCTDGQR--RLGVLTDAGSITAHLLGALQDCDALLLEC 163 >gi|327311459|ref|YP_004338356.1| beta-lactamase domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326947938|gb|AEA13044.1| beta-lactamase domain protein [Thermoproteus uzoniensis 768-20] Length = 635 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 15/82 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTG--PDFYMQ----VLREQVLSIDAVLYTHPHADHIHGI 92 RS++ + + + V++D G P Y + + + + S+DAV+ +H H DH+ Sbjct: 188 RSAILV-----DTTESKVLLDCGLKPSQYEEEFPLLEQVDLDSLDAVVLSHAHMDHVG-- 240 Query: 93 DGLRGYFLKQKRPIDVYAAPDC 114 Y K VY Sbjct: 241 --CLPYLYKYGYRGPVYMTDPT 260 >gi|260171550|ref|ZP_05757962.1| ribonuclease Z [Bacteroides sp. D2] gi|315919864|ref|ZP_07916104.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693739|gb|EFS30574.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 312 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLPGLISTFGLLGRTADLHIHSPRGLEELF 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + + E + + + IP+ RI GF F Sbjct: 101 APMLAFFCKTLTYKVF-----FHEFETKEPMLIYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|222054348|ref|YP_002536710.1| ribonuclease Z [Geobacter sp. FRC-32] gi|221563637|gb|ACM19609.1| ribonuclease Z [Geobacter sp. FRC-32] Length = 379 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++ D G + + + SI+A+ +H H DH G+D + R +D++ P Sbjct: 42 GRALLFDCGQ--LHHLAKRVLRSINAIFISHAHMDHFMGMDTFIRHNHVSPRIVDIFGPP 99 >gi|315302378|ref|ZP_07873251.1| late competence protein [Listeria ivanovii FSL F6-596] gi|313629251|gb|EFR97511.1| late competence protein [Listeria ivanovii FSL F6-596] Length = 376 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTG--PDFY-MQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG D + +L+E +V ID +L THPHADHI D + Sbjct: 51 STLIQSEDGTTILIDTGRQDDDRILTLLKEAKVEKIDLLLLTHPHADHIGNADKVIA 107 >gi|50365387|ref|YP_053812.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] gi|50363943|gb|AAT75928.1| putative metallo-beta lactamase hydrolase [Mesoplasma florum L1] Length = 588 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 19/86 (22%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 N +++D G F L+E I A+ TH H DHI GI Sbjct: 58 EHENEIIMIDAGVKFPDDSMLGINAVIPDYSYLKENESKIKALFITHGHEDHIGGIH--- 114 Query: 97 GYFLKQKRPID-VYAAPDCMKHLFES 121 +L ++ I +YA + + Sbjct: 115 --YLVKQVNIPVIYAPELAAALIRDR 138 >gi|89896948|ref|YP_520435.1| hypothetical protein DSY4202 [Desulfitobacterium hafniense Y51] gi|219667196|ref|YP_002457631.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|89336396|dbj|BAE85991.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537456|gb|ACL19195.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 320 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 14/203 (6%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G + + L + I ++ THPH DHI G+D + Sbjct: 72 SALIQIP----NGKNILIDAGNNADAEFLIKYLQDRGIEEIHILIGTHPHEDHIGGLDKV 127 Query: 96 RGYFLKQKRPID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 F + + V + + + + + + + ++ +E + + Sbjct: 128 IEKFKIGQVIMPKVTSTTRTFEDVLLAVQEKGLKIKEGKAGVQLDLGPLEEGMPAVSAEI 187 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLH 214 + + + + L + + D + + ++ L D LK G H Sbjct: 188 LAPLSGQYEDMNNYSIVLRLVYGPHAFLFTGDAEDVSEKEM-LAAGVN-LKADVLKVGHH 245 Query: 215 SSHFSLSESLKKIELINPKNAIL 237 S S ++ + + PK AI+ Sbjct: 246 GSKSSTTK--DFLAAVAPKYAII 266 >gi|323464368|gb|ADX76521.1| metallo-beta-lactamase superfamily protein [Staphylococcus pseudintermedius ED99] Length = 209 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 10/134 (7%) Query: 56 VIVD-TGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +++D G D +++ + A+L TH H DHI +D + + + VY + Sbjct: 25 ILIDPAGEIDKIDNKIKQSGKQLIAILLTHAHFDHIAALDDVL-----TRYDVPVYMHAE 79 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L + + D P I + D + G + S Sbjct: 80 EFSFLTDPQKNGSAKFKDYGLPIITSQAEPHALDEGMQ---QIGQFNIQTLHTPGHSPGS 136 Query: 174 LGFRFGNVAYCTDV 187 L + F A D Sbjct: 137 LTYVFDEFAVVGDT 150 >gi|260774416|ref|ZP_05883330.1| metallo-beta-lactamase family protein RNA-specific [Vibrio metschnikovii CIP 69.14] gi|260610543|gb|EEX35748.1| metallo-beta-lactamase family protein RNA-specific [Vibrio metschnikovii CIP 69.14] Length = 443 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R V++D G D L V IDA++ TH H DHI I + L Sbjct: 20 RVDGVAVLIDCGLFQGKDATDIELDFPVEHIDALIVTHAHIDHIGRI----PWLLAAGFT 75 Query: 106 IDVYAAPDCMKHL 118 +Y P + + Sbjct: 76 GPIYCTPASAELI 88 >gi|255521495|ref|ZP_05388732.1| putative lipoprotein [Listeria monocytogenes FSL J1-175] Length = 143 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|254993172|ref|ZP_05275362.1| hypothetical protein LmonocytoFSL_09148 [Listeria monocytogenes FSL J2-064] Length = 287 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|269128170|ref|YP_003301540.1| Zn-dependent hydrolase of the beta-lactamase fold-like protein [Thermomonospora curvata DSM 43183] gi|268313128|gb|ACY99502.1| Zn-dependent hydrolase of the beta-lactamase fold-like protein [Thermomonospora curvata DSM 43183] Length = 214 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 59/196 (30%), Gaps = 30/196 (15%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S V T+++D G Q E DAVL TH H DH D LR + Sbjct: 9 SCVRLSKDEGTLVIDPGGLTPEQDALEGA---DAVLITHEHFDHFD-EDRLRQ-AMAANE 63 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VYA+ L + + + + I + I + Sbjct: 64 RLRVYASRVVASKLADL---------GERVKSVGHGDALTVAGFDIHVYGEDHEI----L 110 Query: 165 LQQHGRISSLGFRFGNVAYCT-DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 I + G+ + D P E + L L +SE Sbjct: 111 DPDVPPIPNTGYLIDGQVFHPGDALTVPPEPVPTL---------CLPGSAPW--MKVSEM 159 Query: 224 LKKIELINPKNAILTH 239 ++ I P+ A + H Sbjct: 160 YSYVKEIAPERAYVIH 175 >gi|254780869|ref|YP_003065282.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040546|gb|ACT57342.1| beta-lactamase domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 559 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 21/156 (13%) Query: 48 SERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDG 94 S +++D G F L ++ ++ A+ TH H DH + Sbjct: 27 GSPSSRKWIMIDCGVSFPKDDLPGVDLVFPDITFIMKERKNLMAIFITHAHEDHYGALHD 86 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRY--CFKALDDRTYPPIVNPIVIENNDVPICM 152 L + + VYA+P + L Y K + ++ V + + + Sbjct: 87 LWSFLH-----VPVYASPFAIGLLEAKRVYERVSKKIPCISFQAGDKVDVGAFSIESVRV 141 Query: 153 KSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDV 187 + A+ I G I G ++ + A DV Sbjct: 142 NHSIPETMALVIRSPVGNIVHTGDWKLDDDAILGDV 177 >gi|208779875|ref|ZP_03247219.1| metallo-beta-lactamase superfamily protein, putative [Francisella novicida FTG] gi|208744330|gb|EDZ90630.1| metallo-beta-lactamase superfamily protein, putative [Francisella novicida FTG] Length = 320 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 39/225 (17%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPI 106 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 60 DGKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENL 119 Query: 107 DVYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPIC 151 +F Y L +P ++P++ I+ + Sbjct: 120 PFSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPT 179 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLD 202 + + G + +L ++ G + + + F ++ +N D Sbjct: 180 KVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNAD 239 Query: 203 FLII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 240 ILMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|320106083|ref|YP_004181673.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis SP1PR4] gi|319924604|gb|ADV81679.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis SP1PR4] Length = 557 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D G F L E + +L TH H DHI G+ + Sbjct: 29 RYKDDIIVIDAGLMFPEDELLGVDIVVPDITYLLENRAMVRGILLTHGHEDHIGGLPRIL 88 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + VY + Y L++ + I + + + Sbjct: 89 -----TELNVPVYGTEFTLT-------YVEGKLEEHKLLDGADLIEMVPGE-----RFNI 131 Query: 157 GVIEAIPILQQHGRISS--LGFR--FGNVAYCTDVN 188 G PI H + L R G + + D Sbjct: 132 GPFNIQPIRVTHSLVDCVALAVRTPVGTIVHTGDFK 167 >gi|221194552|ref|ZP_03567609.1| DNA internalization-related competence protein ComEC/Rec2 [Atopobium rimae ATCC 49626] gi|221185456|gb|EEE17846.1| DNA internalization-related competence protein ComEC/Rec2 [Atopobium rimae ATCC 49626] Length = 712 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +++++DT P+ + R+ V ID V+ TH DH+ G+D L G Sbjct: 476 DGASSMLIDTSPNDAVLDALQRQNVFHIDTVVLTHLDMDHVGGVDDLVG 524 >gi|320162410|ref|YP_004175635.1| hypothetical protein ANT_30090 [Anaerolinea thermophila UNI-1] gi|319996264|dbj|BAJ65035.1| hypothetical protein ANT_30090 [Anaerolinea thermophila UNI-1] Length = 329 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 88/283 (31%), Gaps = 69/283 (24%) Query: 52 SNTTVIVDTGPDF----YMQVLREQV--LSIDAVLY-THPHADHIHGIDGLRGYFLKQKR 104 + T+I+D G + R + +++AVL +H H DH G F+ Sbjct: 39 NGYTIILDAGTGIIPLGRELMRRARASGKTVEAVLLFSHLHHDHTQGFPFFAPAFVPS-T 97 Query: 105 PIDVYAAPD-------CMKHLFESFRYCFKALDDRTYPPIV-----NPIVIENNDVPICM 152 + V+ + + + + + + + I++ + + + Sbjct: 98 RLHVFGPDFLASSPKVTLDTVMNPPYFPIRLAELNAWLGFATLRETDVILVGESVGGVAL 157 Query: 153 KSAGGVI---------------EAIPILQQHGRISSLGFRFGNVAYCTDVNAF---PAES 194 SAG I A P H RI +R + Y TD + Sbjct: 158 FSAGDTIPAADPNLVLIRILRSYAHPQGVLHYRID---WRNHAMVYATDTEGYVNGDRRL 214 Query: 195 LEKLQNLDFLIIDALKNGLHS-------------SHFSLSESLKKIELINPKNAILTHMH 241 +D LI DA H H ++S +++ + K +L H Sbjct: 215 ANFAHGVDLLIHDAQYTDEHYLGLVPGLPNTQGFGHSTISIAVQAAQASEAKRLVL--FH 272 Query: 242 VDLDY--------DMVLKSTPSRVVPAFDGMQFSS-----PIP 271 +Y ++ + A +GM + P+P Sbjct: 273 HAPEYSDDQLDFIQEQVERIQPGTLVAQEGMTLTLYDEAEPLP 315 >gi|225403161|ref|ZP_03760458.1| hypothetical protein CLOSTASPAR_04489 [Clostridium asparagiforme DSM 15981] gi|225043209|gb|EEG53455.1| hypothetical protein CLOSTASPAR_04489 [Clostridium asparagiforme DSM 15981] Length = 432 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 33/202 (16%) Query: 50 RGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VD G + + + V ++D V+ THPH+DHI G+D + + Sbjct: 103 ESDGHFMLVDAGENDQADTVVSYLKGQGVEALDYVIGTHPHSDHIGGLDKVID-TFDVGK 161 Query: 105 PI--DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I V +H ++F A+ + + + V I Sbjct: 162 VILPPV-------EHTTKTFEDVLDAVAGKG-------LKLTKPRVGDTYTLGNASFTII 207 Query: 163 PILQQHG---RISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 +G S+G R C D A + + +D D LK G H Sbjct: 208 APNGDYGNDLNNWSVGIRLDYGDNRFVMCGDAEALAEADILE-NGIDI-SADVLKAGHHG 265 Query: 216 SHFSLSESLKKIELINPKNAIL 237 S S SE+ ++ ++P A++ Sbjct: 266 SSTSTSEA--FLDRVSPSVAVI 285 >gi|328950937|ref|YP_004368272.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] gi|328451261|gb|AEB12162.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] Length = 269 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 58/193 (30%), Gaps = 28/193 (14%) Query: 54 TTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 V++DTG R L +A TH H DH G L +R + VYA + Sbjct: 31 KGVLIDTG--CRWTAHRLARLEAEAAFLTHWHEDHSGGAQAL------TRRGVPVYAGRE 82 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ-HGRI- 171 + + Y + + AG + P H + Sbjct: 83 TAQRVRR-----IHEARIPFYRHLTWGRPHSAPVQTAEARFAGFWLVPTPGHTPDHTALF 137 Query: 172 -SSLGFRFGNVAYCTDVNAF--PAESLE-KLQNLDFLIIDALKNGLHS---SHFSLSESL 224 G F Y F P LE L++LD + L+ H +H L E Sbjct: 138 DPEAGLIFTGDLYLGRRARFATPEFDLEALLESLDRV----LELKPHRLYCAHAGLVE-- 191 Query: 225 KKIELINPKNAIL 237 + K L Sbjct: 192 DPSAALRAKRDWL 204 >gi|183984014|ref|YP_001852305.1| metal-dependent hydrolase [Mycobacterium marinum M] gi|183177340|gb|ACC42450.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium marinum M] Length = 255 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 78/252 (30%), Gaps = 48/252 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC S + D S + +++D G Sbjct: 1 MRITVLGCSGS----VVGPD----------------SAASGYLLRAPDTPPIVIDFGGGV 40 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKH 117 + R + VL +H HADH + G F+ ++ +Y D Sbjct: 41 LGALQRHLDPASVHVLLSHLHADHCL---DMPGLFVWRRYHPSRPKGKALLYGPSDTWSR 97 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 L + F D ++ V + + + A P S G R Sbjct: 98 LGAA-SSPFGGEIDDCSDIFDVRHWVDGEPVTLGGVTVVPTVVAHP-------TESYGMR 149 Query: 178 FGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIE 228 F + +AY D + +E + +D + +A + H S +E+ + Sbjct: 150 FTDSTGASLAYSGDT-GMCDQLIELARGVDVFLCEASWTHSPDRPPDLHLSGTEAGRAAA 208 Query: 229 LINPKNAILTHM 240 + +LTH+ Sbjct: 209 RAGVRELLLTHI 220 >gi|188586086|ref|YP_001917631.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350773|gb|ACB85043.1| beta-lactamase domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 566 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 72/217 (33%), Gaps = 48/217 (22%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F M L E +I + TH H DHI + Sbjct: 39 GNDMIVIDAGLKFPDEDMLGVDFVIPDMSYLFEHKDNIKGIFLTHGHEDHIGALP----- 93 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRY--CFKALDDRTYPP----IVNPIVIENNDVPICM 152 +L +K VY + K++ + P + P +E + Sbjct: 94 YLMKKIDAPVYGTKLTLGLAERKLGEQPIQKSISLKKILPGKTMQLGPFKMEFFSTNHSI 153 Query: 153 KSAGGVIEAIPILQQHGRISSLG-FRF------GNVAYCTDVNAFPAESLEKLQNLDFLI 205 + G++ P G I G F+F G VA D N L N L Sbjct: 154 PDSIGIVVHTP----EGTIVHTGDFKFDHTPVSGKVA---DYNKLAE-----LGNKGVLC 201 Query: 206 I-----DALKNGLHSSHFSLSESLKKIELINPKNAIL 237 + +A + G S ++ E L +I PK IL Sbjct: 202 LLSDSTNAERPGYTESDRTVGERLDEIFRQAPKRIIL 238 >gi|239926681|ref|ZP_04683634.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291434994|ref|ZP_06574384.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] gi|291337889|gb|EFE64845.1| beta-lactamase domain-containing protein [Streptomyces ghanaensis ATCC 14672] Length = 561 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I AV+ TH H DHI G+ Y L+++ I V + + L + Sbjct: 70 IRDRLDDIVAVILTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFLEAKLK----- 120 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 + P + + + G + + H SL R G V + Sbjct: 121 ------EHGIRPRTVRVREGD---RRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHT 171 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 172 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 231 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 232 APRRVIVSSFASHVH 246 >gi|328950320|ref|YP_004367655.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] gi|328450644|gb|AEB11545.1| beta-lactamase domain protein [Marinithermus hydrothermalis DSM 14884] Length = 567 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 24/193 (12%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA---PDCMKHLFES 121 + L E I + TH H DHI + + Q + +Y A +K E Sbjct: 73 RIDYLVENAKYIKGWILTHGHEDHIGAL----PFLFPQLPKVPIYGAKLTLGLLKGKLEE 128 Query: 122 FRYCFKALDDRTYPP-----IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 F D P I ++ + + G+I PI GRI G Sbjct: 129 FGLRPGEFDLNEVGPDARLKIGRYFTVDLFRMTHSIPDNSGMIIHTPI----GRIVHTGD 184 Query: 176 FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINP 232 F+ V+ + + + LI D A + G+ S ++++L ++ Sbjct: 185 FKLDPTPIDGQVSHLAKIAQAGAEGVLLLIADSTNAERPGITPSEAEVAKALDQVIGQAK 244 Query: 233 KNAILT----HMH 241 +T H+H Sbjct: 245 GRVFVTTFASHIH 257 >gi|288906174|ref|YP_003431396.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|306832215|ref|ZP_07465369.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979142|ref|YP_004288858.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732900|emb|CBI14479.1| putative metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus UCN34] gi|304425654|gb|EFM28772.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179070|emb|CBZ49114.1| metallo-beta-lactamase superfamily protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + I ++ TH H DHI GI FL + Sbjct: 36 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRIKGLVITHGHEDHIGGIP-----FLLK 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 91 QANIPIYAGPLALALIKGKLEEHGLLRDAKLYEINANTELTFKNLSVTFFRTTHSIPEPL 150 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 151 GIVIHTP----QGKIVCTGDFKFD 170 >gi|283851509|ref|ZP_06368789.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] gi|283573043|gb|EFC21023.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B] Length = 260 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 75/217 (34%), Gaps = 40/217 (18%) Query: 53 NTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGI----DGLRGYFLKQK 103 N T+++D G D Q ++ + THPH DHI I D L +F +K Sbjct: 24 NDTILLDAGSVTSAIDLAAQA------RLEHIFVTHPHLDHIKDILFLADNLIEFFAGKK 77 Query: 104 R-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 R P+ ++ P + + D P N V+ + + G + Sbjct: 78 RPPLQIHGLPQVLDAIATHLLNDTIWPDFTVIPE--NSPVLTYAPMTPEVPVVIGGVTVT 135 Query: 163 PILQQHGRISSLGFRF------GNVAYCTDVNAFPA-----ESLEKLQNLDFLIIDAL-- 209 H + +S GF N+AY D P +SL L LI +A Sbjct: 136 AFPVNHAKAAS-GFVLWEDDGAKNLAYTGDTGPCPEWWAFCDSLPF--PLAHLITEASFP 192 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + S H + ++ + K I H++ Sbjct: 193 SDMERLATASKHLTPKLLRAELARLRAKPEI--HIYH 227 >gi|167756481|ref|ZP_02428608.1| hypothetical protein CLORAM_02014 [Clostridium ramosum DSM 1402] gi|167703889|gb|EDS18468.1| hypothetical protein CLORAM_02014 [Clostridium ramosum DSM 1402] Length = 266 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 80/271 (29%), Gaps = 69/271 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 ILG G + C KN ++VD G Sbjct: 3 KVIILGTGNAG---VKNCY-NTCFALKNKN------------------EYLLVDAGGGNG 40 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI---------DVYAAP 112 Q+ ++ I ++ TH H DH+ G + F I ++Y Sbjct: 41 ILKQLELAKIELSQITNMIVTHSHTDHVLG---VVWIFRMVATKIKSGEYDGNFNIYCHD 97 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA----------- 161 + + + + + ++ Y I I I + ++ Sbjct: 98 ELVSTIKTIIK---LTVQEKLYNLIDERIFINEVQDGQKITICEHLVTFFDIYSTKAKQF 154 Query: 162 -IPILQQHGRISSLGFR-FGNVA--YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS- 216 I G+++ LG F + Y D +E+ Q DF + Sbjct: 155 GFSIELDDGKLTCLGDEPFNELCYQYAVDSKWLLSEAFCLYQERDFF-------KPYEKY 207 Query: 217 HFSLSESLKKIELINPKNAILTH-----MHV 242 H ++ E+ + + +N KN IL H + Sbjct: 208 HSTVREASELAQTLNIKNLILYHTEEKNLSH 238 >gi|308232572|ref|ZP_07416495.2| hypothetical protein TMAG_00288 [Mycobacterium tuberculosis SUMu001] gi|308369237|ref|ZP_07417027.2| hypothetical protein TMBG_02336 [Mycobacterium tuberculosis SUMu002] gi|308371457|ref|ZP_07425034.2| hypothetical protein TMCG_01302 [Mycobacterium tuberculosis SUMu003] gi|308372660|ref|ZP_07429401.2| hypothetical protein TMDG_01534 [Mycobacterium tuberculosis SUMu004] gi|308372744|ref|ZP_07429700.2| hypothetical protein TMEG_00293 [Mycobacterium tuberculosis SUMu005] gi|308373825|ref|ZP_07433765.2| hypothetical protein TMFG_02030 [Mycobacterium tuberculosis SUMu006] gi|308374988|ref|ZP_07442312.2| hypothetical protein TMGG_01341 [Mycobacterium tuberculosis SUMu007] gi|308376236|ref|ZP_07438106.2| hypothetical protein TMHG_02865 [Mycobacterium tuberculosis SUMu008] gi|308378474|ref|ZP_07482701.2| hypothetical protein TMIG_00149 [Mycobacterium tuberculosis SUMu009] gi|308379621|ref|ZP_07486935.2| hypothetical protein TMJG_01050 [Mycobacterium tuberculosis SUMu010] gi|308380813|ref|ZP_07491152.2| hypothetical protein TMKG_01041 [Mycobacterium tuberculosis SUMu011] gi|308213679|gb|EFO73078.1| hypothetical protein TMAG_00288 [Mycobacterium tuberculosis SUMu001] gi|308328412|gb|EFP17263.1| hypothetical protein TMBG_02336 [Mycobacterium tuberculosis SUMu002] gi|308328816|gb|EFP17667.1| hypothetical protein TMCG_01302 [Mycobacterium tuberculosis SUMu003] gi|308332659|gb|EFP21510.1| hypothetical protein TMDG_01534 [Mycobacterium tuberculosis SUMu004] gi|308340151|gb|EFP29002.1| hypothetical protein TMEG_00293 [Mycobacterium tuberculosis SUMu005] gi|308344137|gb|EFP32988.1| hypothetical protein TMFG_02030 [Mycobacterium tuberculosis SUMu006] gi|308347939|gb|EFP36790.1| hypothetical protein TMGG_01341 [Mycobacterium tuberculosis SUMu007] gi|308351807|gb|EFP40658.1| hypothetical protein TMHG_02865 [Mycobacterium tuberculosis SUMu008] gi|308352590|gb|EFP41441.1| hypothetical protein TMIG_00149 [Mycobacterium tuberculosis SUMu009] gi|308356542|gb|EFP45393.1| hypothetical protein TMJG_01050 [Mycobacterium tuberculosis SUMu010] gi|308360490|gb|EFP49341.1| hypothetical protein TMKG_01041 [Mycobacterium tuberculosis SUMu011] Length = 319 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 18 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 73 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 74 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 133 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 134 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 192 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 193 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 251 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 252 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 285 >gi|53803138|ref|YP_115136.1| ribonuclease Z [Methylococcus capsulatus str. Bath] gi|53756899|gb|AAU91190.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 321 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 V+ D G D +R ++L + V +H H DH G D L L + I ++ Sbjct: 8 EKRAVLFDLG-DVRTLPVR-KILRLSDVFVSHAHMDHFFGFDWLLRLCLGRDLRIRLFGP 65 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + + R YP V E + + +++ Sbjct: 66 AGFLDQVEHKLS-AYTWNLVRGYPTDFTLEVTEVSSETVGRRASF 109 >gi|313632327|gb|EFR99371.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL N1-067] Length = 215 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I+D G + + ++ ++ A+L TH H DHI ++ +R + I Sbjct: 32 DGLALIIDPGAE--ANKIEAEIAKLEVTPVAILLTHCHYDHIGALEEIRATY-----SIP 84 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY +P L + P + P E ++ + P Sbjct: 85 VYVSPKEQSWLSS--PELNLSAHIAGTPIVARPAEHEFTLGDYNIEGFHFKVVPTP---G 139 Query: 168 HGRISSLGFRFGNVAYCTD 186 H I SL F F + D Sbjct: 140 HS-IGSLSFIFTDFVIVGD 157 >gi|298481478|ref|ZP_06999670.1| ribonuclease Z [Bacteroides sp. D22] gi|295086941|emb|CBK68464.1| RNAse Z [Bacteroides xylanisolvens XB1A] gi|298272342|gb|EFI13911.1| ribonuclease Z [Bacteroides sp. D22] Length = 312 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + ++ +P ++ L Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIH-SPRGLEEL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 F F +T V E + + + IP+ RI GF F Sbjct: 100 FAPMLAFF----CKTLTYKVFFHEFETKEPMLIYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|256810348|ref|YP_003127717.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens AG86] gi|256793548|gb|ACV24217.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens AG86] Length = 634 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 34/193 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIH 90 RS L + +T V++D G + + + +DAV+ TH H DH Sbjct: 193 RSCLYVQTP-----DTRVLIDCGINVAFEDKAFPHFDAPEFSIEDLDAVIVTHAHLDHCG 247 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + VY + Y A + P + + Sbjct: 248 ----FVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTSKDIKTCVKHT 303 Query: 150 ICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTD----VNAFPAES 194 I + G + P ++ H LG N+AY D + + Sbjct: 304 IPID-YGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGDGLYNLAYTGDIKFETSRLLEPA 362 Query: 195 LEKLQNLDFLIID 207 + + L+ LII+ Sbjct: 363 VCQFPRLETLIIE 375 >gi|306834343|ref|ZP_07467460.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] gi|304423516|gb|EFM26665.1| metallo-beta-lactamase superfamily protein [Streptococcus bovis ATCC 700338] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + I ++ TH H DHI GI FL + Sbjct: 36 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRIKGLVITHGHEDHIGGIP-----FLLK 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 91 QANIPIYAGPLALALIKGKLEEHGLLRDAKLYEINANTELTFKNLSVTFFRTTHSIPEPL 150 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 151 GIVIHTP----QGKIVCTGDFKFD 170 >gi|300361557|ref|ZP_07057734.1| ribonuclease Z [Lactobacillus gasseri JV-V03] gi|300354176|gb|EFJ70047.1| ribonuclease Z [Lactobacillus gasseri JV-V03] Length = 309 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 55/179 (30%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + R PI ++ E+ + + H R+ S GFR Sbjct: 102 TS----LRVSKTRVSYPIKYVVLKEDG-----LIFENNLFAVYTARLDH-RVPSFGFRV 150 >gi|116629529|ref|YP_814701.1| beta-lactamase superfamily hydrolase [Lactobacillus gasseri ATCC 33323] gi|238852679|ref|ZP_04643089.1| ribonuclease Z [Lactobacillus gasseri 202-4] gi|311110829|ref|ZP_07712226.1| ribonuclease Z [Lactobacillus gasseri MV-22] gi|122273533|sp|Q043V9|RNZ_LACGA RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|116095111|gb|ABJ60263.1| RNAse Z [Lactobacillus gasseri ATCC 33323] gi|238834825|gb|EEQ27052.1| ribonuclease Z [Lactobacillus gasseri 202-4] gi|311065983|gb|EFQ46323.1| ribonuclease Z [Lactobacillus gasseri MV-22] Length = 309 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP + +V++ + + H R+ S GFR Sbjct: 102 TSLK---VSRTRVSYP--IKYVVLKEDGLIFENNL----FAVYTARLDH-RVPSFGFRV 150 >gi|320157605|ref|YP_004189984.1| metallo-beta-lactamase family protein RNA-specific [Vibrio vulnificus MO6-24/O] gi|319932917|gb|ADV87781.1| metallo-beta-lactamase family protein RNA-specific [Vibrio vulnificus MO6-24/O] Length = 446 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 45 SRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S R + +++D G D + V IDA++ TH H DHI I + L Sbjct: 15 SCHEFRAAGIALLIDCGLFQGKDARPPEVDFPVKHIDALVLTHAHIDHIGRI----PWLL 70 Query: 101 KQKRPIDVYAAPDCMK 116 +Y + Sbjct: 71 AAGFSGAIYCTEATAE 86 >gi|289192183|ref|YP_003458124.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp. FS406-22] gi|288938633|gb|ADC69388.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp. FS406-22] Length = 634 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 34/193 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIH 90 RS L + +T V++D G + + + +DAV+ TH H DH Sbjct: 193 RSCLYVQTP-----DTRVLIDCGINVACEDKAFPHFDAPEFSIEDLDAVIVTHAHLDHCG 247 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + VY + Y A + P + + Sbjct: 248 ----FVPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTSKDIKTCVKHT 303 Query: 150 ICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTD----VNAFPAES 194 I + G + P ++ H LG N+AY D + + Sbjct: 304 IPID-YGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTGDIKFETSRLLEPA 362 Query: 195 LEKLQNLDFLIID 207 + + L+ LII+ Sbjct: 363 VCQFPRLETLIIE 375 >gi|218782995|ref|YP_002434313.1| ribonuclease Z [Desulfatibacillum alkenivorans AK-01] gi|218764379|gb|ACL06845.1| ribonuclease Z [Desulfatibacillum alkenivorans AK-01] Length = 335 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 5/122 (4%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++ D G + + +L I V +H H DH G D L L + + I ++ Sbjct: 28 KRAILFDLGD--LHALSPKDILKITHVFVSHTHVDHFIGFDHLLRICLGRDKIIHMFGPE 85 Query: 113 DCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP--ILQQHG 169 + + Y + L++ + + + C + G + P +++ HG Sbjct: 86 GIIANTAGKLQGYSWNLLENYESEFGFRVTEVHEDRLETCNFTTLGEFKPTPREVVRNHG 145 Query: 170 RI 171 + Sbjct: 146 GL 147 Score = 37.8 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 9/72 (12%) Query: 179 GNVAYCTDVNAFPAESLEKL---QNLDFLIIDAL---KNGLH---SSHFSLSESLKKIEL 229 +AY TDV + L +N D L I+A ++ H +H + ++ + + Sbjct: 241 QKIAYITDVAGHADNQKKILALAENADQLFIEASFADEDAEHAVARNHLTAGQAGELAKT 300 Query: 230 INPKNAILTHMH 241 + I H+ Sbjct: 301 AKARQMINFHIS 312 >gi|238909722|ref|ZP_04653559.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 15/103 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 D R + YA + + + +D Y Sbjct: 83 DNSRIICHPDIAR-ERYA-AMTFLGITRKIKKLSREVDYSRYR 123 >gi|219559885|ref|ZP_03538961.1| hypothetical protein MtubT1_22197 [Mycobacterium tuberculosis T17] Length = 319 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 18 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 73 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 74 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 133 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 134 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 192 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 193 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 251 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 252 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 285 >gi|254461956|ref|ZP_05075372.1| metallo-beta-lactamase family protein [Rhodobacterales bacterium HTCC2083] gi|206678545|gb|EDZ43032.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium HTCC2083] Length = 555 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 22/156 (14%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + + G ++VD G F L+E+ ++A+ TH H D Sbjct: 21 AYVYGYGKPGKEKLILVDLGVTFPDMDGTPGVDLILPDITWLKERRNDLEAIFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENN 146 H+ I F +Q + +Y Y +A T P + Sbjct: 81 HVGAIGH----FYEQLKA-PIYTRAFTANIARRKLDEYGVEAKAVTTVSPWPEVVKAGPF 135 Query: 147 DVPI-CMKSAGGVIEAIPILQQHGRISSLG-FRFGN 180 V + + + I GR+ G F+ Sbjct: 136 SVGFLPISHSIPESSGLCIDSPDGRVLHTGDFKIDK 171 >gi|134055610|emb|CAK37256.1| unnamed protein product [Aspergillus niger] Length = 943 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 102/332 (30%), Gaps = 107/332 (32%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R S+ ++ ++D G + Sbjct: 440 EIITLGTGSSA----------------PSKYRNVSATLLNVPG----YGYYLLDCGENTL 479 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LRE + ++ + +H HADH G Sbjct: 480 GQLKRVFSPEKLREVLQNLRMIWISHLHADHHLGTASVIKAWFQENYPEGIPQTDEVEMD 539 Query: 92 ----IDGLRGYF------------------LKQKRPIDVYAAPDCMK-HLFESFRYCFKA 128 + R + + I + A+P + ++ F Y Sbjct: 540 MSKILKEKRLFVVSEQMMKGWLEEYAAVENYGFGKVIPLSASPYLHQGNIRTQFVYRH-C 598 Query: 129 LDDRTYP--------PIVNPIVIENNDVPIC--MKSAGGVIEAIPILQQHGR-------I 171 D +YP P + + P+ ++ A G+ + + H R + Sbjct: 599 RGDGSYPGHQLDATRPATTSLSFHDQSSPLTSLLREATGLSDLLTTRVSHCRGAMAVSLV 658 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNG------LHSSHFSLSESL 224 GF+ ++ D P+ + +N LI +A + H +LSE+L Sbjct: 659 FPDGFKI---SFSGDCR--PSAGFATIGRNSTVLIHEATFQDDMAVSAIAKKHSTLSEAL 713 Query: 225 KKIELINPKNAILTHMHVDLDYDMVLKSTPSR 256 + L+N + +LTH ++ PSR Sbjct: 714 EVGRLMNARAILLTHFSQRYQKLARVEEAPSR 745 >gi|327441216|dbj|BAK17581.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Solibacillus silvestris StLB046] Length = 555 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L V I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDDLLGIDYVIPDYTYLVRNVDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ I + NDV K+A Sbjct: 89 QVNIPVYGGKLALGLLRNK-------LEEHGLLRTTKLIEFKENDVIKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H + G GN+ + D Sbjct: 137 FFRTTHSIPDAYGIVIKTPPGNIVHTGDFK 166 >gi|295397875|ref|ZP_06807937.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] gi|294973855|gb|EFG49620.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] Length = 557 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F Q L + + + TH H DHI GI + LKQ Sbjct: 35 LLLDAGVKFPEDDLLGIDYVIANYQYLIQNEQKVKGLFITHGHEDHIGGI----PFLLKQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I +YA M + L++ +I+ + V K++ Sbjct: 91 IN-IPIYAGKLAMALIKNK-------LEEHGLLRDAELHIIDEDSVIKFRKTS-----VS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H ++G GNV + D Sbjct: 138 FYRTTHSIPDAMGIVVKTPPGNVVFTGDYK 167 >gi|188580270|ref|YP_001923715.1| beta-lactamase domain protein [Methylobacterium populi BJ001] gi|179343768|gb|ACB79180.1| beta-lactamase domain protein [Methylobacterium populi BJ001] Length = 557 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 36/137 (26%), Gaps = 31/137 (22%) Query: 47 VSERGSNTTVIVDTGPDFY--------------MQVLREQVLSIDAVLYTHPHADHIHGI 92 + ++VD G F + + E+ + + TH H DHI I Sbjct: 28 IGPEKQRKWIMVDCGMGFAGEEGLPGIDLMFPDLTFIEERKKDLLGIFITHAHEDHIGAI 87 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + VYA L P V+ I+ Sbjct: 88 SELWP-----RIKAPVYATRFAKNLLETR-------RLSEPGAPKVDLREIKPGR----- 130 Query: 153 KSAGGVIEAIPILQQHG 169 + G E + H Sbjct: 131 RVTVGPFEIEFVPVAHS 147 >gi|330809350|ref|YP_004353812.1| Putative beta-lactamase domain-containing protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377458|gb|AEA68808.1| Putative beta-lactamase domain-containing protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 451 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 50 RGSNTTVIVDTGPDF-YMQVLREQ-------VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + +++D G Y Q+ + +DA++ TH H DH ++ Sbjct: 20 EHDDQRILIDCGLFQGYKQLRLHNWDPFELPMRDLDAIVLTHAHLDHSG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMKHLF 119 +YA+P + + Sbjct: 76 NGYRGPIYASPATCELVK 93 >gi|306821244|ref|ZP_07454858.1| ComEC/Rec2 family protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550756|gb|EFM38733.1| ComEC/Rec2 family protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 288 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 15/80 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYM----QVLRE-QVLSIDAVLYTHPHADHIHGIDG 94 SSL I+ TV++D G + + +RE + +D V+ THP ADHI G+D Sbjct: 51 SSLIITPSG-----KTVLIDAGDEAHAKKVVNYIRERGIEKLDLVIATHPDADHIGGMDK 105 Query: 95 LRGYFLKQKRPIDVYAAPDC 114 + F IDV+A PD Sbjct: 106 VIKNF-----DIDVFAMPDV 120 >gi|269986923|gb|EEZ93199.1| Metal-dependent hydrolase of the beta-lactamase superfamily III [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 204 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 177 RFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS-----HFSLSESLKKIELIN 231 R ++AY TD+ + E + ++ +D LI+++ + H ++ E++ + Sbjct: 99 RGKSIAYVTDL-RYSREIIPFIKGVDTLILESTFGEEFNKSYEFFHLNIKEAMLLAKSSG 157 Query: 232 PKNAILTH 239 K H Sbjct: 158 AKEVQFVH 165 >gi|229088453|ref|ZP_04220204.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] gi|228694862|gb|EEL48087.1| Beta-lactamase domain protein [Bacillus cereus Rock3-44] Length = 255 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 31/108 (28%), Gaps = 27/108 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T LG G++L N +++D G Sbjct: 1 MKITALGTGSAL-------------SKRFFNNNY---------IFEFEGKRLLIDGGTSL 38 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR---GYFLKQKRPID 107 + + ID + TH H DH GI+ L + + + + Sbjct: 39 KYSLQAASMKHSDIDYAIITHFHFDHAGGIEELLTHNYWNFENGQHVP 86 >gi|167462691|ref|ZP_02327780.1| Metallo-beta-lactamase superfamily protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 141 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 26/140 (18%) Query: 46 RVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 + + T +++D G ++L + +I A+ TH HADHI G+ L Sbjct: 14 CIHVQSGETGILIDAGLPKTKIEKRLLTNDIDPTAIKAIFITHAHADHIKGLP------L 67 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K I V+A+ K + + + + G I+ Sbjct: 68 ANKYKIPVFASEGEWKDIDSVDDDLCRFIIKHSGA---------------YTAVDLGEIK 112 Query: 161 AIPILQQHGRISSLGFRFGN 180 P H LG+ + Sbjct: 113 LSPFRTHHDAYEPLGYAIED 132 >gi|304394937|ref|ZP_07376821.1| hydrolase [Pantoea sp. aB] gi|304357190|gb|EFM21553.1| hydrolase [Pantoea sp. aB] Length = 275 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 47/149 (31%), Gaps = 16/149 (10%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGL 95 + I+ RG ++VD GP ++ + +D VL TH H DHI G+ Sbjct: 53 IHINCYLIRGRGRVMLVDAGPGAPGHLMANLAALGVRPDDVDTVLLTHCHPDHIGGLLDA 112 Query: 96 --RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 F + + A ++R + N P Sbjct: 113 EKEPVFKCAEIILHPLEAQYWRDDKKREMA------NERGQRNFLLVRQTLNVYAPNIRF 166 Query: 154 SAGGVI--EAIPILQQHGRISSLGFRFGN 180 GG I E +P+ GFR + Sbjct: 167 FNGGKIAEEILPVFLPGHTPGHTGFRIDS 195 >gi|169853823|ref|XP_001833589.1| hypothetical protein CC1G_03806 [Coprinopsis cinerea okayama7#130] gi|116505239|gb|EAU88134.1| hypothetical protein CC1G_03806 [Coprinopsis cinerea okayama7#130] Length = 544 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 25/98 (25%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + LG + G P+ +N S + + +VD Sbjct: 3 RQNLSLMFLGTASGGG------------PSETRN----CSSLL--CDFMDDLSLWLVDCA 44 Query: 62 PDFYMQV-------LREQVLSIDAVLYTHPHADHIHGI 92 Q + + + + TH HADHI GI Sbjct: 45 EGTLRQFQFQPQEGFKYRANRVTKIFITHMHADHIMGI 82 >gi|166240562|ref|XP_001732975.1| beta-lactamase family protein [Dictyostelium discoideum AX4] gi|165988660|gb|EDR41096.1| beta-lactamase family protein [Dictyostelium discoideum AX4] Length = 885 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 95/302 (31%), Gaps = 84/302 (27%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG +S VP R + + IS N I+D G +Q+ Sbjct: 486 FLGTASS--VPS--------------EHRNVTGILIS----SSENNHFILDCGESTLIQM 525 Query: 69 LREQVLSIDA---------VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH-- 117 R +D + +H HADH G+ + + + + KH Sbjct: 526 ERY-FGRVDLQKILIDTKMIWISHLHADHHLGL---ISIVKARDEALSKLSEEERSKHSP 581 Query: 118 --LFESFRYC-FKALDDRTYPPIVNPIVIENND-----VPICMKSAGGVIEAIPILQQHG 169 + Y + ++ P ++ + V +C +P++ Sbjct: 582 MLVVSHSSYINWITQYRESFDPSLSFVTQSIGSGGQNMVQVCETLGISSFTNVPVIHAPN 641 Query: 170 RISSL-----GFRFGNVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS------- 216 + GFR + + D P + LEK + D LI H S Sbjct: 642 AYGCVIDFNDGFR---LTFSGDTR--PCQLLEKAGADSDLLI--------HESTFANDEK 688 Query: 217 -------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK----STPSRVVPAFDGMQ 265 H +L E+L + + I+TH Y ++ P V A+D ++ Sbjct: 689 DQAYLKRHSTLDETLNVSYNMRARKTIVTHFSQR--YQNTIRCGFGKVPYGV--AYDLIR 744 Query: 266 FS 267 FS Sbjct: 745 FS 746 >gi|325002556|ref|ZP_08123668.1| beta-lactamase domain protein [Pseudonocardia sp. P1] Length = 584 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 PDF + +++ IDA++ TH H DHI + + L+ + I V + + Sbjct: 87 PDFR--AIEDRLDDIDALVLTHGHEDHIGAV----PWLLRMRPDIPVVGSRFTLA 135 >gi|294646673|ref|ZP_06724298.1| ribonuclease Z [Bacteroides ovatus SD CC 2a] gi|294807104|ref|ZP_06765922.1| ribonuclease Z [Bacteroides xylanisolvens SD CC 1b] gi|292637961|gb|EFF56354.1| ribonuclease Z [Bacteroides ovatus SD CC 2a] gi|294445670|gb|EFG14319.1| ribonuclease Z [Bacteroides xylanisolvens SD CC 1b] Length = 315 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 5 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 43 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 44 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPRGLEELF 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + + E + + + IP+ RI GF F Sbjct: 104 APMLAFFCKTLTYKVF-----FHEFETKEPMLVYDDRSVTVTTIPLKH---RIPCCGFLF 155 Query: 179 G 179 Sbjct: 156 E 156 >gi|320011202|gb|ADW06052.1| cobalbumin biosynthesis protein [Streptomyces flavogriseus ATCC 33331] Length = 400 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 10/83 (12%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG GA G+PR C + R + + +++D P Sbjct: 1 MELTLLGTGAPDGLPRPDCPCAVCASSRGGGAR--------AATALLVDDALLLDLTPGA 52 Query: 65 YMQVLREQ--VLSIDAVLYTHPH 85 R + ++ VL THPH Sbjct: 53 VFAAARAGRSLAAVRQVLLTHPH 75 >gi|291456206|ref|ZP_06595596.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM 20213] gi|291381483|gb|EFE89001.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM 20213] Length = 618 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 90 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 143 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + F + + + + D K G + Sbjct: 144 KLRPDIPLIGSKLTL---------AFVDAKCKEHRQNPTKVEVSGRD-----KLKVGPFD 189 Query: 161 AIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLEK--------------LQNLDFLI 205 + H +L A D + L + +D L+ Sbjct: 190 LEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKIGEKGVDLLM 249 Query: 206 ID 207 +D Sbjct: 250 MD 251 >gi|183983707|ref|YP_001851998.1| metal-dependent hydrolase [Mycobacterium marinum M] gi|254808650|sp|B2HMC3|RNZ_MYCMM RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|183177033|gb|ACC42143.1| metal-dependent hydrolase [Mycobacterium marinum M] Length = 279 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 39/189 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + + +VD G Sbjct: 2 IEITLLGTGSPIPDP---------DRAGP-------STLVRAGGQ-----VFLVDCGRGV 40 Query: 65 --YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAP---DC 114 + + AVL TH H+DHI + + + P+ V P + Sbjct: 41 LQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAADPAPLQVIGPPGTAET 100 Query: 115 MKHLFESF----RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + ++F Y D PP + E D + + G I P + Sbjct: 101 VDAMLKAFGRDIGYRIAHHADLNAPPPIEVH--EYTDGTVWDRD-GVAIRVAPTDHR-PV 156 Query: 171 ISSLGFRFG 179 ++GFR Sbjct: 157 APTIGFRVE 165 >gi|157364451|ref|YP_001471218.1| beta-lactamase domain-containing protein [Thermotoga lettingae TMO] gi|157315055|gb|ABV34154.1| beta-lactamase domain protein [Thermotoga lettingae TMO] Length = 278 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 72/235 (30%), Gaps = 57/235 (24%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G + + ++ +I + TH H DHI G+ + +++P+ V Sbjct: 20 RILFDAGEGVSLTM-SNKIYAIRYIFLTHGHIDHISGL--WTIVNTRNNSMGDREKPLTV 76 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + + + +A +D + N I + + ++ +P +H Sbjct: 77 YYPKG-NTAIEDWINFIKQANNDLRFE--FNHIPVSAGEKVFLRQAGNFARYVVPFKVKH 133 Query: 169 GRIS-SLGFRF-------------------------------------GNVAYCTDVNAF 190 SLG+ + D Sbjct: 134 TSQDMSLGYSIIETRRRLKEEYRNLPEKEILELSKKLGSSNITEFYEKKILTISGDTFGI 193 Query: 191 PAESLEKLQNLDFLIIDALKNGLH----SSHFSLSESLKKIELINPKNAILTHMH 241 E+ ++ + L+ + ++H SL E L + K IL H+ Sbjct: 194 DPENA---RDSEILLHECTFLRSSDRKMNAHASLEEVLDIAKSAEVKKLILYHIS 245 >gi|71279881|ref|YP_268729.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] gi|71145621|gb|AAZ26094.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 43 KISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I +S + ++ +VD G ++ L+E L++ A+L TH H+DH+ GI+ L Y Sbjct: 18 YIWAISSQNNDKIALVDPGDAVVCIKYLQENNLALSAILITHHHSDHVGGIEKLLEYSKD 77 Query: 102 QKRPIDVYAAP 112 + P+ VY Sbjct: 78 KAWPVTVYGPA 88 >gi|213692892|ref|YP_002323478.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524353|gb|ACJ53100.1| beta-lactamase domain protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 566 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF ++ ++ +DA++ TH H DHI G+ Y L Sbjct: 38 LLIDCGVLFPEEEQPGVDLILPDF--SYIKNRLDKVDALVLTHGHEDHIGGV----PYLL 91 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + + + V P +E +V + A Sbjct: 92 KLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREKLKVGPFDLEFVNVTHSIPDAL 151 Query: 157 GVIEAIP 163 V P Sbjct: 152 AVYVKTP 158 >gi|328780437|ref|XP_394940.3| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis mellifera] Length = 730 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 65/182 (35%), Gaps = 30/182 (16%) Query: 52 SNTTVIVDTG--PDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G +F + +RE V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDENFDQEFIRELKRHVHQIDAVLLSYPDPLHLGALPYLVGKC---GLNC 82 Query: 107 DVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +YA K + + F Y F + IV + I MK G Sbjct: 83 PIYATIPVYK-MGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLII 206 + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 142 YGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLIT 200 Query: 207 DA 208 DA Sbjct: 201 DA 202 >gi|169831110|ref|YP_001717092.1| beta-lactamase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637954|gb|ACA59460.1| beta-lactamase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 554 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 45/139 (32%), Gaps = 30/139 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R +++D G F Q L E + +L TH H DHI + Sbjct: 26 RYGEDILVIDCGLMFPEEEMLGIDIVIPDIQYLLENRELVRGILLTHGHEDHIGAL---- 81 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y LKQ + V+ + L FR + + + +VI + Sbjct: 82 PYVLKQIN-VPVFGTKLTLGLLEAKFR-------EHVFSEEIKMVVINPRE-----TVHI 128 Query: 157 GVIEAIPILQQHGRISSLG 175 G A I H ++G Sbjct: 129 GCFSAEFIRVSHSVPDAVG 147 >gi|170078201|ref|YP_001734839.1| metallo-beta-lactamase domain-containing protein [Synechococcus sp. PCC 7002] gi|169885870|gb|ACA99583.1| metallo-beta-lactamase superfamily domain protein [Synechococcus sp. PCC 7002] Length = 553 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 22/172 (12%) Query: 55 TVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +++D G DF + R+++ DAV +H H DH GI L + + +Y + Sbjct: 39 QLLLDCGVKDFEHFLARDKMP--DAVFCSHAHRDHAEGILAL----HRHFPAVPIYLSAA 92 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 L ++ + P +P+ I N + A + H Sbjct: 93 TQALLPLNWPGTKVPAELGQVLPWRSPVEIAKNLTLQLFPAGHLPGAAAALFTLHTPERD 152 Query: 174 LGFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDAL---KNGLHS 215 V Y D + S+E L+ L D LII+ H Sbjct: 153 Y-----TVFYTGDFSVSHFQLVNGLSIEALRGLQPDVLIIEGSYGTMRHPHR 199 >gi|168261915|ref|ZP_02683888.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349123|gb|EDZ35754.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 15/103 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 D R + YA + + + +D Y Sbjct: 83 DNSRIICHPDIAR-ERYA-AMTFLGITRKIKKLSREVDYSRYR 123 >gi|329767223|ref|ZP_08258750.1| ribonuclease J 1 [Gemella haemolysans M341] gi|328836890|gb|EGF86537.1| ribonuclease J 1 [Gemella haemolysans M341] Length = 480 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 32/153 (20%) Query: 42 LKISRVSERGSNTTVI-VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + I + ++ +D Y + + + I A++ TH H DHI G+ FL Sbjct: 34 IIIIDAGVKFPGDNILGIDYVIPDYS-YIEKNIDKIKALIITHGHEDHIGGLP-----FL 87 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN-------------ND 147 +K + +Y P + + L++ VI+ ++ Sbjct: 88 LRKVNLPIYGGPLAIGLIR-------SKLEEHNLLAKAELNVIDEDTVLSFKYLKVSFHN 140 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + + GVI P G I G F+F Sbjct: 141 TTHSIPDSFGVIVNTP----QGNIVHTGDFKFD 169 >gi|326624680|gb|EGE31025.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|168231031|ref|ZP_02656089.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468673|ref|ZP_03074657.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455037|gb|EDX43876.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334454|gb|EDZ21218.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 15/103 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 D R + YA + + + +D Y Sbjct: 83 DNSRIICHPDIAR-ERYA-AMTFLGITRKIKKLSREVDYSRYR 123 >gi|320547528|ref|ZP_08041814.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320447873|gb|EFW88630.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 16/115 (13%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + I ++ TH H DHI GI FL ++ I VYA P + + D Sbjct: 65 NIDRIKGLVITHGHEDHIGGIP-----FLLKQANIPVYAGPLALALIKGKLEEHGLLRDA 119 Query: 132 RTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + Y N + + + G++ P G+I G F+F Sbjct: 120 KLYEINANTELTFKNLSVTFFRTTHSIPEPLGIVVHTP----QGKIVCTGDFKFD 170 >gi|308177067|ref|YP_003916473.1| hypothetical protein AARI_12940 [Arthrobacter arilaitensis Re117] gi|307744530|emb|CBT75502.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117] Length = 313 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 65/234 (27%), Gaps = 46/234 (19%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TI+GC S P +S + + + +++D G Sbjct: 1 MKLTIIGCTGS--FPGPGS---------------PASCYLVTAFDGTRDWKILLDLGSGA 43 Query: 65 YMQVLRE-QVLSIDAVLYTHPHADHIH---GIDGLRGY--FLKQKRPIDVYAAPDCMKHL 118 + R + ID ++ +H H DH G+ + + + V+ D + + Sbjct: 44 LGVLQRYTDLKDIDGIMISHLHPDHCMDLCGLHVAIRWDPTGWGRDRMLVHGPEDTAERI 103 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + D T + V ++ G P +H + R Sbjct: 104 ET----AYSLPDGDTMAKDYDFQVWKSLK-----PVNIGPFTITPYPVRHPIKEAYALRV 154 Query: 179 GN-------------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 + Y D ++ +E + D + +A H Sbjct: 155 EAHEPGPDGELLTSVLTYSGDTDSC-DSLVEAARGADMFLCEAAFEEGRDDHID 207 >gi|294778925|ref|ZP_06744341.1| ribonuclease Z [Bacteroides vulgatus PC510] gi|294447234|gb|EFG15818.1| ribonuclease Z [Bacteroides vulgatus PC510] Length = 309 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 87/295 (29%), Gaps = 77/295 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P R +S ++ ++D G MQ+ + ++ ++ + +H H Sbjct: 11 CGSALPTTRHFATSQVVNI-----REKLFMIDCGEGAQMQLRKSKLKFTRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F R +Y + + L + K + + Sbjct: 66 GDHCFGLMGLISTFGMLGRTATLYIHCHAELERLLTPQLDFFCKGMSYKVV-----FQTF 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------------------------- 178 + I IE IP+ RI + GF F Sbjct: 121 DPGKAEIIYDDRSLTIETIPLRH---RIPTCGFLFSEKQTPAHIRRDMINFYEIPVYELN 177 Query: 179 ------------GNVA----------------YCTDVNAFPAESLEKLQNLDFLIIDALK 210 G + YC+D P +E++ +D L +A Sbjct: 178 RIKNGADYTLPDGKIVPNNKLTIPSALPRRYAYCSDTIYLP-RIIEQIYGVDLLFHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H + S++ + K ++ H + + +L S + P Sbjct: 237 AQSEQARAKETFHTTASQAGEIARTAKVKQLLIGHFSARYEDESILLQEASDIFP 291 >gi|315231423|ref|YP_004071859.1| hypothetical protein TERMP_01661 [Thermococcus barophilus MP] gi|315184451|gb|ADT84636.1| hypothetical protein TERMP_01661 [Thermococcus barophilus MP] Length = 270 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 32/211 (15%) Query: 54 TTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + VD GP ++ R ++ ID + +H H DH ++V Sbjct: 32 KKIYVDPGPGALVRAWRYKIDPRRIDVLFVSHRHTDHC--------------NDVEVMLE 77 Query: 112 PDCMKHLFESF----RYCFKALDDRTYPPIVNPI---VIENNDVPICMKSAGGVIEAIPI 164 M + D+ P + + E + K G E I Sbjct: 78 GITMGVTKKRGILIASKSVVHGDESHTPAVSQYHLDSLEEIHTPNPGDKFILGEEEMIIT 137 Query: 165 LQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG--LHSSHF 218 H +++GFR G+++Y D F E + + +I + H Sbjct: 138 PAMHADPTTIGFRLRTKYGDISYIPDTQYF-DELKKWHEGARVMIAAITRPKDMRIPYHL 196 Query: 219 SLSESLKKIE--LINPKNAILTHMHVDLDYD 247 + + ++ P+ I+ H+ + + + Sbjct: 197 CTEDVIYMLKGMKDKPELLIMNHIGMKMHFA 227 >gi|159043881|ref|YP_001532675.1| beta-lactamase domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157911641|gb|ABV93074.1| beta-lactamase domain protein [Dinoroseobacter shibae DFL 12] Length = 556 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 49/181 (27%), Gaps = 35/181 (19%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L E+ ++A+ TH H D Sbjct: 20 AYVYGYGPEGRERYILVDLGVAFPDMDTTPGVDLITADVSWLAERADRLEAIFVTHAHED 79 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ G+ L + VYA D+ P V+E Sbjct: 80 HVGGVS-----LLHGRLKAPVYARAFTGNIARRKMEEKGLDPDEVRIVGA-WPEVVEA-- 131 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 G + + H + G G V + D P + + + D Sbjct: 132 ---------GPFKVSYLPVSHSIPEAAGLVIDSPAGRVIHTGDFKLDPTPIVGEPFDPDL 182 Query: 204 L 204 Sbjct: 183 W 183 >gi|168463904|ref|ZP_02697821.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442488|ref|YP_002042192.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|200389139|ref|ZP_03215751.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194401151|gb|ACF61373.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195633592|gb|EDX52006.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|199606237|gb|EDZ04782.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|326440616|ref|ZP_08215350.1| adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase [Streptomyces clavuligerus ATCC 27064] Length = 395 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA G+PR C R ++L + + +++D P + Sbjct: 1 MLGTGAPAGLPRPDCPCAVCATARGPLARAATALLV--------DGALLLDLTPGAALAA 52 Query: 69 LREQ--VLSIDAVLYTHPH 85 R ++ + VL THPH Sbjct: 53 ARAGHSLVGVRQVLLTHPH 71 >gi|323483880|ref|ZP_08089257.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14163] gi|323402834|gb|EGA95155.1| metallo-beta-lactamase [Clostridium symbiosum WAL-14163] Length = 277 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 SL I +R T D +L E+++ ++ ++ +H H DH G+ L + Sbjct: 23 SLLIEHEGKRWLFDTGQTDVFMKNAA-LLGERLMGLNGIILSHGHFDHCGGLKFLAEEYR 81 Query: 101 KQKRPI-DVYAAP 112 K + VY Sbjct: 82 KAGIDMPPVYVRE 94 >gi|319939346|ref|ZP_08013706.1| metallo-beta-lactamase [Streptococcus anginosus 1_2_62CV] gi|319811332|gb|EFW07627.1| metallo-beta-lactamase [Streptococcus anginosus 1_2_62CV] Length = 553 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLVETKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG GN+ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FKTTHSIPESLGIVLKTSEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|255027665|ref|ZP_05299651.1| hypothetical protein LmonocytFSL_17237 [Listeria monocytogenes FSL J2-003] Length = 343 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 38 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 94 >gi|224499481|ref|ZP_03667830.1| hypothetical protein LmonF1_07182 [Listeria monocytogenes Finland 1988] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 107 >gi|254827890|ref|ZP_05232577.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284801276|ref|YP_003413141.1| hypothetical protein LM5578_1026 [Listeria monocytogenes 08-5578] gi|284994418|ref|YP_003416186.1| hypothetical protein LM5923_0980 [Listeria monocytogenes 08-5923] gi|258600271|gb|EEW13596.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|284056838|gb|ADB67779.1| hypothetical protein LM5578_1026 [Listeria monocytogenes 08-5578] gi|284059885|gb|ADB70824.1| hypothetical protein LM5923_0980 [Listeria monocytogenes 08-5923] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 107 >gi|119944272|ref|YP_941952.1| hydroxyacylglutathione hydrolase [Psychromonas ingrahamii 37] gi|226724011|sp|A1SS88|GLO2_PSYIN RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|119862876|gb|ABM02353.1| Hydroxyacylglutathione hydrolase [Psychromonas ingrahamii 37] Length = 256 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 43 KISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + S +IVD G + +L +Q L +DA+L TH H DHI G+D L Sbjct: 14 YIWLIKDSQSQHCIIVDPGDAAPVLTILEDQKLIVDAILLTHHHYDHIGGVDALLS---A 70 Query: 102 QKRPIDVYAAPDCMKHLF 119 + I +Y+ Sbjct: 71 RDEKISIYSKKKLFDRCR 88 >gi|16802985|ref|NP_464470.1| hypothetical protein lmo0945 [Listeria monocytogenes EGD-e] gi|224502739|ref|ZP_03671046.1| hypothetical protein LmonFR_09499 [Listeria monocytogenes FSL R2-561] gi|16410347|emb|CAC99023.1| lmo0945 [Listeria monocytogenes EGD-e] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 107 >gi|47096232|ref|ZP_00233830.1| lipoprotein, putative [Listeria monocytogenes str. 1/2a F6854] gi|254898882|ref|ZP_05258806.1| hypothetical protein LmonJ_03675 [Listeria monocytogenes J0161] gi|254911629|ref|ZP_05261641.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254935955|ref|ZP_05267652.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|47015377|gb|EAL06312.1| lipoprotein, putative [Listeria monocytogenes str. 1/2a F6854] gi|258608543|gb|EEW21151.1| conserved hypothetical protein [Listeria monocytogenes F6900] gi|293589577|gb|EFF97911.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 107 >gi|323692884|ref|ZP_08107109.1| hypothetical protein HMPREF9475_01972 [Clostridium symbiosum WAL-14673] gi|323503059|gb|EGB18896.1| hypothetical protein HMPREF9475_01972 [Clostridium symbiosum WAL-14673] Length = 277 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 SL I +R T D +L E+++ ++ ++ +H H DH G+ L + Sbjct: 23 SLLIEHEGKRWLFDTGQTDVFMKNAA-LLGERLMGLNGIILSHGHFDHCGGLKFLAEEYR 81 Query: 101 KQKRPI-DVYAAP 112 K + VY Sbjct: 82 KAGIDMPPVYVRE 94 >gi|145598915|ref|YP_001162991.1| hydroxyacylglutathione hydrolase [Yersinia pestis Pestoides F] gi|160395515|sp|A4TL56|GLO2_YERPP RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|145210611|gb|ABP40018.1| hydroxyacylglutathione hydrolase [Yersinia pestis Pestoides F] Length = 251 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 A+L TH H DH+ G+ LR I VY + K Sbjct: 48 AILLTHHHNDHVGGVADLR----HHFPDIPVYGPQETAK 82 >gi|198245034|ref|YP_002216917.1| beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353890|ref|YP_002227691.1| hypothetical protein SG2853 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858210|ref|YP_002244861.1| hypothetical protein SEN2789 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197939550|gb|ACH76883.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273671|emb|CAR38661.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710013|emb|CAR34368.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326629002|gb|EGE35345.1| beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|118387803|ref|XP_001027004.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila] gi|89308774|gb|EAS06762.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila SB210] Length = 1496 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 6/50 (12%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 ++D G + QVL E I V++TH H DH GI + Sbjct: 844 GKYRTLIDCGQNEDGYKELLKQVLDETQSQISQVIFTHNHPDHTLGIKDI 893 >gi|51597282|ref|YP_071473.1| hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis IP 32953] gi|153947476|ref|YP_001400033.1| metallo-beta-lactamase family protein [Yersinia pseudotuberculosis IP 31758] gi|170023352|ref|YP_001719857.1| hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis YPIII] gi|186896387|ref|YP_001873499.1| hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis PB1/+] gi|81638785|sp|Q667M5|GLO2_YERPS RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|166990463|sp|A7FFK5|GLO2_YERP3 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|226724039|sp|B2KAD1|GLO2_YERPB RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|226724040|sp|B1JR44|GLO2_YERPY RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|51590564|emb|CAH22205.1| putative hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis IP 32953] gi|152958971|gb|ABS46432.1| metallo-beta-lactamase family protein [Yersinia pseudotuberculosis IP 31758] gi|169749886|gb|ACA67404.1| hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis YPIII] gi|186699413|gb|ACC90042.1| hydroxyacylglutathione hydrolase [Yersinia pseudotuberculosis PB1/+] Length = 251 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 A+L TH H DH+ G+ LR I VY + K Sbjct: 48 AILLTHHHNDHVGGVADLR----HHFPDIPVYGPQETAK 82 >gi|108806554|ref|YP_650470.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis Antiqua] gi|108813079|ref|YP_648846.1| hydroxyacylglutathione hydrolase [Yersinia pestis Nepal516] gi|149366918|ref|ZP_01888952.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis CA88-4125] gi|165924657|ref|ZP_02220489.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938282|ref|ZP_02226840.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011971|ref|ZP_02232869.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211458|ref|ZP_02237493.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399719|ref|ZP_02305237.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419706|ref|ZP_02311459.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167470218|ref|ZP_02334922.1| metallo-beta-lactamase family protein [Yersinia pestis FV-1] gi|218928248|ref|YP_002346123.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis CO92] gi|229841010|ref|ZP_04461169.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843115|ref|ZP_04463261.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis biovar Orientalis str. India 195] gi|229895467|ref|ZP_04510639.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis Pestoides A] gi|229903522|ref|ZP_04518635.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis Nepal516] gi|294503095|ref|YP_003567157.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis Z176003] gi|122960103|sp|Q0WHW5|GLO2_YERPE RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|123372682|sp|Q1CAJ7|GLO2_YERPA RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|123372998|sp|Q1CFI4|GLO2_YERPN RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|108776727|gb|ABG19246.1| hydroxyacylglutathione hydrolase [Yersinia pestis Nepal516] gi|108778467|gb|ABG12525.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis Antiqua] gi|115346859|emb|CAL19745.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis CO92] gi|149291292|gb|EDM41367.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis CA88-4125] gi|165913660|gb|EDR32279.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923717|gb|EDR40849.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989138|gb|EDR41439.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207229|gb|EDR51709.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962447|gb|EDR58468.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050427|gb|EDR61835.1| metallo-beta-lactamase family protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|229679292|gb|EEO75395.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis Nepal516] gi|229689462|gb|EEO81523.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis biovar Orientalis str. India 195] gi|229697376|gb|EEO87423.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701622|gb|EEO89649.1| predicted hydroxyacylglutathione hydrolase [Yersinia pestis Pestoides A] gi|262365375|gb|ACY61932.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis D182038] gi|294353554|gb|ADE63895.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis Z176003] gi|320014215|gb|ADV97786.1| putative hydroxyacylglutathione hydrolase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 251 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 A+L TH H DH+ G+ LR I VY + K Sbjct: 48 AILLTHHHNDHVGGVADLR----HHFPDIPVYGPQETAK 82 >gi|326382614|ref|ZP_08204305.1| hypothetical protein SCNU_06740 [Gordonia neofelifaecis NRRL B-59395] gi|326198733|gb|EGD55916.1| hypothetical protein SCNU_06740 [Gordonia neofelifaecis NRRL B-59395] Length = 335 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 82/296 (27%), Gaps = 92/296 (31%) Query: 52 SNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHG---------------IDG 94 +VD G Q ++ + ++ + TH HADHI ID Sbjct: 34 DGNVYMVDCGRSAVTQYVKSGLRFDTLRGIFLTHLHADHIADYYNFILLAGNSQNRNIDP 93 Query: 95 LRGYFLKQKRPIDVYAAPDC---------------------------MKHLFESFRYCFK 127 + G I V+ M L Y + Sbjct: 94 VTGLNDTLSEKIGVWGPGAAGGLPEKFGGGSAPTVGEDENPTPGTREMTMLCHR-AYAYS 152 Query: 128 ALDDRTYPPIVNPIVI-ENNDVPICMKSA----------------GGVIEAIPILQQHGR 170 + I +P + E ND+ I A GV+ IL HG Sbjct: 153 SNLFLRDMGIRDPRSLAEVNDIAIPDIGADFQNRAPDMEPFVVMDDGVVRVSAILVPHGP 212 Query: 171 I-SSLGFRF----------GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG------- 212 + + FRF G+ AY +++ S D L+ +AL Sbjct: 213 VYPAFAFRFDCAYGSVTFSGDTAYSSNLIRLADSS-------DVLVHEALNLEGWDSSSP 265 Query: 213 -----LHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 L SH + + +L+H+ + + + +DG Sbjct: 266 AFFDHLLQSHVEVQKVGDIAAKARCGKLVLSHIADMAENPIPVDKWQRWAQSGYDG 321 >gi|313609669|gb|EFR85171.1| late competence protein [Listeria monocytogenes FSL F2-208] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTG--PDFY-MQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG D + L+E + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKESNIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|167550193|ref|ZP_02343950.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324893|gb|EDZ12732.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|254832088|ref|ZP_05236743.1| hypothetical protein Lmon1_12099 [Listeria monocytogenes 10403S] gi|290893496|ref|ZP_06556480.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290556997|gb|EFD90527.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTG--PDFY-MQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG D + L+E + ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKESNIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|153953954|ref|YP_001394719.1| metal-dependent hydrolase [Clostridium kluyveri DSM 555] gi|219854568|ref|YP_002471690.1| hypothetical protein CKR_1225 [Clostridium kluyveri NBRC 12016] gi|146346835|gb|EDK33371.1| Predicted metal-dependent hydrolase [Clostridium kluyveri DSM 555] gi|219568292|dbj|BAH06276.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 555 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N +++D G F + L++ + + + TH H DHI + Y Sbjct: 30 NDIIVIDCGLKFPDEEMLGIDVVIPDITYLKKNIDRVRGIFLTHGHEDHIGAL----PYV 85 Query: 100 LKQKRPIDVYAAPDCM 115 LK+ + VY + + Sbjct: 86 LKEIN-VPVYGSKLTL 100 >gi|28211114|ref|NP_782058.1| hypothetical protein CTC01437 [Clostridium tetani E88] gi|28203554|gb|AAO35995.1| conserved protein [Clostridium tetani E88] Length = 542 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 82/206 (39%), Gaps = 28/206 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D G + + + V +D V+ THPH D+I G++ + Sbjct: 147 SILIQQ-----DGHNMLIDAGTNATETAVVSYLKHQGVTKLDYVIGTHPHEDYIGGLEKV 201 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR----TYPPIVNPIVIENNDVPIC 151 + + V+ + H ++F+ ++ ++ + P + N + N I Sbjct: 202 ID-TFQVDK---VFMPE--INHTTQTFKNVVTSIKNKGLKISTPKVGNSYGLGNARWQIL 255 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + L + ++ L F + + D + + + + LD D + Sbjct: 256 APVSASYDN----LNNYSIVTKLKFGNNSFTFTGDAESLSEGEILQ-KQLDI-SSDVINI 309 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++ ++ INPK A++ Sbjct: 310 GHHGSRTSTTQ--NFLDKINPKYAVI 333 >gi|16800013|ref|NP_470281.1| hypothetical protein lin0944 [Listeria innocua Clip11262] gi|16413403|emb|CAC96175.1| lin0944 [Listeria innocua Clip11262] Length = 376 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TT+++DTG ++L + +D +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|57117157|ref|YP_178016.1| hypothetical protein Rv3796 [Mycobacterium tuberculosis H37Rv] gi|148663664|ref|YP_001285187.1| hypothetical protein MRA_3836 [Mycobacterium tuberculosis H37Ra] gi|148825003|ref|YP_001289757.1| hypothetical protein TBFG_13830 [Mycobacterium tuberculosis F11] gi|215405850|ref|ZP_03418031.1| hypothetical protein Mtub0_19608 [Mycobacterium tuberculosis 02_1987] gi|215425046|ref|ZP_03422965.1| hypothetical protein MtubT9_01115 [Mycobacterium tuberculosis T92] gi|215432777|ref|ZP_03430696.1| hypothetical protein MtubE_19428 [Mycobacterium tuberculosis EAS054] gi|215448143|ref|ZP_03434895.1| hypothetical protein MtubT_20154 [Mycobacterium tuberculosis T85] gi|218755584|ref|ZP_03534380.1| hypothetical protein MtubG1_20109 [Mycobacterium tuberculosis GM 1503] gi|253800844|ref|YP_003033846.1| hypothetical protein TBMG_03843 [Mycobacterium tuberculosis KZN 1435] gi|254233289|ref|ZP_04926615.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254366342|ref|ZP_04982386.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|254552911|ref|ZP_05143358.1| hypothetical protein Mtube_21112 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260203001|ref|ZP_05770492.1| hypothetical protein MtubK8_01597 [Mycobacterium tuberculosis K85] gi|289556063|ref|ZP_06445273.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289572448|ref|ZP_06452675.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289747638|ref|ZP_06507016.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289748320|ref|ZP_06507698.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289755929|ref|ZP_06515307.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289759963|ref|ZP_06519341.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289763981|ref|ZP_06523359.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294995290|ref|ZP_06800981.1| hypothetical protein Mtub2_12453 [Mycobacterium tuberculosis 210] gi|297636478|ref|ZP_06954258.1| hypothetical protein MtubK4_20235 [Mycobacterium tuberculosis KZN 4207] gi|297733472|ref|ZP_06962590.1| hypothetical protein MtubKR_20375 [Mycobacterium tuberculosis KZN R506] gi|307086595|ref|ZP_07495708.1| hypothetical protein TMLG_00288 [Mycobacterium tuberculosis SUMu012] gi|313660803|ref|ZP_07817683.1| hypothetical protein MtubKV_20370 [Mycobacterium tuberculosis KZN V2475] gi|38490381|emb|CAE55641.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|124603082|gb|EAY61357.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134151854|gb|EBA43899.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148507816|gb|ABQ75625.1| hypothetical protein MRA_3836 [Mycobacterium tuberculosis H37Ra] gi|148723530|gb|ABR08155.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253322348|gb|ACT26951.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289440695|gb|EFD23188.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289536879|gb|EFD41457.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289688166|gb|EFD55654.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289688907|gb|EFD56336.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289696516|gb|EFD63945.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289711487|gb|EFD75503.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715527|gb|EFD79539.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|308364007|gb|EFP52858.1| hypothetical protein TMLG_00288 [Mycobacterium tuberculosis SUMu012] gi|323717662|gb|EGB26864.1| hypothetical protein TMMG_00289 [Mycobacterium tuberculosis CDC1551A] gi|326905634|gb|EGE52567.1| hypothetical protein TBPG_03593 [Mycobacterium tuberculosis W-148] gi|328460572|gb|AEB05995.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 375 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 74 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 129 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 130 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 189 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 190 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 248 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 249 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 307 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 308 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 341 >gi|296109857|ref|YP_003616806.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus infernus ME] gi|295434671|gb|ADG13842.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus infernus ME] Length = 631 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 61/192 (31%), Gaps = 32/192 (16%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD------FYMQ--VLREQVLSIDAVLYTHPHADHIH 90 RS L + +T V++D G + Y Q + +DAV+ TH H DH Sbjct: 190 RSCLLLQTP-----DTKVLLDCGVNIAYEEKMYPQFDAPEFSIEDLDAVIITHAHLDHCG 244 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 + VY + + + P + I+ + Sbjct: 245 ----FLPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLDIAEKEGKPVPFSSKEIKECVKHV 300 Query: 151 CMKSAGGVIEAIPILQ--QHGRISSLG-----FRFG----NVAYCT----DVNAFPAESL 195 G + P ++ H LG FG N+AY D + ++ Sbjct: 301 IPLDYGVTTDISPSIKLTLHNAGHVLGSAIAHLHFGEGLYNLAYTGDLKFDTSRLLEPAV 360 Query: 196 EKLQNLDFLIID 207 + L+ LII+ Sbjct: 361 CQFPRLEALIIE 372 >gi|80159792|ref|YP_398536.1| metallo beta-lactamase family protein [Clostridium phage c-st] gi|78675382|dbj|BAE47804.1| metallo beta-lactamase family protein [Clostridium phage c-st] Length = 388 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 20/201 (9%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + +++D G + + V +D V+ THPH DHI G+ + Sbjct: 143 SILIQQ-----DKHNMLIDAGSNKTSSTVANYLKSKGVNKLDYVIATHPHEDHIGGMAYV 197 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + I A H +F+ AL ++ V + + + Sbjct: 198 IN-NFNVNKFI---MAKVT--HTSNTFKNMVNALKNKGLKITVPNVGDKYSLGTSTFTIV 251 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 L + ++ L F + + D + + + LD D LK G H Sbjct: 252 APNSNKYNNLNNYSIVTKLKFGNNSFLFTGDAESLSEGEI-LAKQLDIQS-DVLKLGHHG 309 Query: 216 SHFSLSESLKKIELINPKNAI 236 S S + S ++ +NPK AI Sbjct: 310 SKTSSTTS--FLDKVNPKYAI 328 >gi|301059163|ref|ZP_07200104.1| putative ribonuclease J 1 [delta proteobacterium NaphS2] gi|300446743|gb|EFK10567.1| putative ribonuclease J 1 [delta proteobacterium NaphS2] Length = 528 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 19/114 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE + V+ TH H DHI + + LK+ P+ V+ + L E Sbjct: 27 PDF--TFLRENREKLKGVILTHGHEDHIGAM----PFLLKEF-PVRVFGTGFTLDLLREK 79 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L + P + + ++ G + I H + G Sbjct: 80 -------LKEHILPQDADLRTVIPGEI-----HEIGPFKVEFIRVNHSIVDGAG 121 >gi|218247991|ref|YP_002373362.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC 8801] gi|218168469|gb|ACK67206.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801] Length = 549 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 16/172 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D G ++ + +D V +H HADH G+ L F R + +YA+ Sbjct: 36 GHYRILLDCGLSNLTPLVSQAQPPVDMVFCSHAHADHARGLLALHQAF----RDLPIYAS 91 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ + + P+ +E ++ G + + + Sbjct: 92 EVTAQLLPLNWPKE-PSSETSFCQPLKWRSPLEIDENLTVELFRAGHLPGASAILLSYQT 150 Query: 172 SSLGFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALK-NGLHS 215 R + Y D + S+E L+ L D LII+ G H Sbjct: 151 PQ---RTYKLLYTGDFSLSNLQLVEGLSVEALRGLSPDILIIEGSYGTGRHP 199 >gi|118463167|ref|YP_882820.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium avium 104] gi|118164454|gb|ABK65351.1| hydrolase of the metallo-beta-lactamase superfamily protein [Mycobacterium avium 104] Length = 558 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI GI Sbjct: 35 EHLGRLLIIDCGVMFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGGI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y LK + I V + + + + + P+ +E ++ KS Sbjct: 91 --PYLLKLRPDIPVVGSKFTLALVAA-----------KCREHRLKPVFVEVSE---GRKS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 THGVFECEYFAVNHSIPDALA 155 >gi|307705798|ref|ZP_07642642.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307620657|gb|EFN99749.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|296814910|ref|XP_002847792.1| metallo-beta-lactamase superfamily protein [Arthroderma otae CBS 113480] gi|238840817|gb|EEQ30479.1| metallo-beta-lactamase superfamily protein [Arthroderma otae CBS 113480] Length = 299 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 40 SSLKISRV--SERGSNTTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHG 91 +S + S +++DTG Q L + ++ L TH H DH+ G Sbjct: 33 TSSLLQATNKSPSSHYKRLLIDTGEGKPSWSVALQQTLTSERATVSHALLTHWHHDHVGG 92 Query: 92 IDGLRGYFLKQK 103 + LR + Sbjct: 93 VRDLRRICPDVQ 104 >gi|257060686|ref|YP_003138574.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] gi|256590852|gb|ACV01739.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802] Length = 549 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 16/172 (9%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + +++D G ++ + +D V +H HADH G+ L F R + +YA+ Sbjct: 36 GHYRILLDCGLSNLTPLVSQAQPPVDMVFCSHAHADHARGLLALHQAF----RDLPIYAS 91 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + L ++ + + P+ +E ++ G + + + Sbjct: 92 EVTAQLLPLNWPKE-PSSETSFCQPLKWRSPLEIDENLTVELFRAGHLPGASAILLSYQT 150 Query: 172 SSLGFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALK-NGLHS 215 R + Y D + S+E L+ L D LII+ G H Sbjct: 151 PQ---RTYKLLYTGDFSLSNLQLVEGLSVEALRGLSPDILIIEGSYGTGRHP 199 >gi|197248859|ref|YP_002147849.1| beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212562|gb|ACH49959.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|148983525|ref|ZP_01816844.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP3-BS71] gi|225855910|ref|YP_002737421.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae P1031] gi|147923672|gb|EDK74784.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae SP3-BS71] gi|225724404|gb|ACO20256.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae P1031] gi|301799301|emb|CBW31827.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + + Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRNA 118 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I + + ++ I + H G+I G F+F Sbjct: 119 KLYE-INHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIICTGDFKFD 169 >gi|28210538|ref|NP_781482.1| ComE-like protein [Clostridium tetani E88] gi|28202975|gb|AAO35419.1| come-like protein, metallo beta-lactamase superfamily hydrolase [Clostridium tetani E88] Length = 304 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 27/225 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + + +E +++D GP+ + L + + I ++ THPH DHI G++ + Sbjct: 56 SILVQQDNE-----NMLIDAGPNSSSEKLVNYLKQNGIKEIKYLVATHPHEDHIGGMNKV 110 Query: 96 RGYFLKQKRPIDVY-AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMK 153 F + + A K++ E+ + K P + + I + + I Sbjct: 111 INNFKVESVYMPKKIANTKTFKNMVEAMK---KNNLKAKTPRVGDKINLGDAKFTILWPN 167 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 + G+ F F D +S+ L+N + + LK G Sbjct: 168 EQEQSNTNNYSIVLKGQYGENTFLF-----TGDAEQLAEKSI--LRNNTDIRAEVLKLGH 220 Query: 214 HSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPS 255 H S S S S K +E +NPK A+ + + ++K Sbjct: 221 HGS--STSTSDKFLEKVNPKYAVASCEKGNSYGHPHREIVKKLKD 263 >gi|309791804|ref|ZP_07686291.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] gi|308226126|gb|EFO79867.1| beta-lactamase domain-containing protein [Oscillochloris trichoides DG6] Length = 358 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I TV++D GP + + + ID ++ THPHADHI G+ + Sbjct: 93 SILIQAP----DGATVLIDGGPQNGLALAYLQGQGITHIDTLIATHPHADHIGGLIDI 146 >gi|282858006|ref|ZP_06267207.1| ribonuclease J 1 (RNase J1) [Pyramidobacter piscolens W5455] gi|282584160|gb|EFB89527.1| ribonuclease J 1 (RNase J1) [Pyramidobacter piscolens W5455] Length = 604 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 30/137 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L E I +L TH H DHI + + Sbjct: 81 ENDIVVIDAGLMFPDEEMLGIDFVIPDISYLEENRKKIRGILITHGHEDHIGAL----PF 136 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L K + VY+A + + Y P + +V + GV Sbjct: 137 VLP-KLDVPVYSAKLTLGMIEGKM-----LEAAPRYKPRL-------MEVKAGETISLGV 183 Query: 159 IEAIPILQQHGRISSLG 175 + I H +LG Sbjct: 184 FKVTFISVCHSIPDALG 200 >gi|254173740|ref|ZP_04880412.1| beta-lactamase domain protein [Thermococcus sp. AM4] gi|214032432|gb|EEB73262.1| beta-lactamase domain protein [Thermococcus sp. AM4] Length = 272 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 13/90 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I ++ D G + M++L + SID V +H H DH G+ Sbjct: 22 SFLIEA-----DGKRILFDAGQSAEPVLYNMKLLGIEPSSIDYVFLSHCHYDHTGGL--- 73 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 G R + V A P + F + Y Sbjct: 74 LGILRAIGRRVPVIAHPSIFRRHFITRPYL 103 >gi|118590022|ref|ZP_01547426.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] gi|118437519|gb|EAV44156.1| Beta-lactamase-like protein [Stappia aggregata IAM 12614] Length = 561 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 48 SERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDG 94 T +IVD G F ++ L ++V +I ++ TH H DH GI Sbjct: 34 GPEDDRTWLIVDCGVSFAGPELPGIDVVVPDIKFLEDEVDNIAGMVITHAHEDHYGGILH 93 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHL 118 L + + VYA L Sbjct: 94 LWPFL-----KVPVYATAFTAGLL 112 >gi|327285222|ref|XP_003227333.1| PREDICTED: zinc phosphodiesterase ELAC protein 1-like [Anolis carolinensis] Length = 364 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 49/154 (31%), Gaps = 32/154 (20%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG GA+ P R S+ + E + D G Sbjct: 2 SMDVTFLGTGAAY----------------PSPTRGASATVVRFEGECW-----LFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGID------GLRGYFLKQKRPIDVYAAPDCM 115 Q ++ Q+ I + TH H DH G+ L+ K P+D+Y Sbjct: 41 TQTQFMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSDPAGNKLPVDIYGPLGLR 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 L+ L T+P +V+ +V P Sbjct: 101 SFLWRIMALSHSQL---TFPYVVHELVPTPEQCP 131 >gi|296502388|ref|YP_003664088.1| zinc-dependent hydrolase [Bacillus thuringiensis BMB171] gi|296323440|gb|ADH06368.1| zinc-dependent hydrolase [Bacillus thuringiensis BMB171] Length = 419 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G D Y ++ RE +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYEDGYPKIEREAAPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|307711096|ref|ZP_07647518.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307617058|gb|EFN96236.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|293364410|ref|ZP_06611136.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307702625|ref|ZP_07639577.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291317256|gb|EFE57683.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307623741|gb|EFO02726.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|270291931|ref|ZP_06198146.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] gi|270279459|gb|EFA25301.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|228477025|ref|ZP_04061663.1| ribonuclease J 1 [Streptococcus salivarius SK126] gi|322373731|ref|ZP_08048267.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] gi|228251044|gb|EEK10215.1| ribonuclease J 1 [Streptococcus salivarius SK126] gi|321278773|gb|EFX55842.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V + A++ TH H DHI GI FL + Sbjct: 37 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRVKALVITHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 92 QANIPIYAGPLALALIKGKLEEHGLLRDAQLYEINANTELTFKNMSVTFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 152 GIVIHTP----QGKIVCTGDFKFD 171 >gi|204928352|ref|ZP_03219552.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322674|gb|EDZ07871.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 265 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|157414258|ref|YP_001485124.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9215] gi|157388833|gb|ABV51538.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9215] Length = 657 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 70/232 (30%), Gaps = 57/232 (24%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F L+ + ++ TH H DHI GI Sbjct: 43 GDDIILIDGGLAFPSDGMHGVNVVMPDTTYLQANLHRFRGMIVTHGHEDHIGGISH---- 98 Query: 99 FLKQKRPID-VYAAPDCMKHLFESFRYCFKA-------LDDRTYPPIVNPIVIENND--- 147 +K I +Y P M L A ++ R + IE Sbjct: 99 -HLKKFRIPVIYGPPLAMSMLKGKMEEAGVADRTTIQIIEPRQVVKLGQNFSIEFIRNTH 157 Query: 148 -----------VPICMKSAGGVIEA--IPILQQHGRISSLGFRF--GNVAYCTD-----V 187 P+ + G + +P +H I + + G + +D V Sbjct: 158 SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERMVYYGEKGVLCLLSDSTNSEV 217 Query: 188 NAFPAESLEKLQNLDFLIIDA-----LKNGLHSSH---FSLSESLKKIELIN 231 F + NLD LI +A L S+H + ++K I Sbjct: 218 KGFVPSEISVFPNLDRLISEAKGRVMLTTFASSTHRVAMVIQLAIKHGRKIG 269 >gi|16329560|ref|NP_440288.1| hypothetical protein sll0647 [Synechocystis sp. PCC 6803] gi|1652043|dbj|BAA16968.1| sll0647 [Synechocystis sp. PCC 6803] Length = 256 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 68/241 (28%), Gaps = 33/241 (13%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 + T LG G++ V N ++ + L + + ++D G D Sbjct: 4 NLTFLGSGSAFTV-------------GADNFQSNAILTL------DNGKKFLIDCGTDIR 44 Query: 66 MQVLREQVLSID--AVLYTHPHADHIHGIDGLRGY---FLKQKRPIDVYAAPDCMKHLFE 120 + + D + +H H+DH+ G+ G+ F ++Y + D L+E Sbjct: 45 FSLYALGLSHRDITDIYVSHLHSDHVGGL-EYVGFSTMFDPNCGKPNLYLSQDIAADLWE 103 Query: 121 S---FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 + + +I+ + + + G Sbjct: 104 RSLAGGMEAIEGGMTEVDSYFQIHALGPGETFTWENVNFQLIKLNHVDTGSMLMPAYGLF 163 Query: 178 FG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFSLSESLKKIELINP 232 F V + D E D + D + H +E K I Sbjct: 164 FTVNHFQVFFSNDTKFSYDRLQEYFHRADIIFHDCEISPYPSPVHAHYNELRKLPAAIKA 223 Query: 233 K 233 K Sbjct: 224 K 224 >gi|15669421|ref|NP_248231.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus jannaschii DSM 2661] gi|2496166|sp|Q58633|Y1236_METJA RecName: Full=Uncharacterized protein MJ1236 gi|1591868|gb|AAB99240.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus jannaschii DSM 2661] Length = 634 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 34/193 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIH 90 RS L + +T V++D G + + + +DAV+ TH H DH Sbjct: 193 RSCLYVQTP-----DTRVLIDCGINVACEDKAFPHFDAPEFSIEDLDAVIVTHAHLDHCG 247 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + VY + Y A + P + + Sbjct: 248 ----FIPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTSKDIKTCVKHT 303 Query: 150 ICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTD----VNAFPAES 194 I + G + P ++ H LG N+AY D + + Sbjct: 304 IPID-YGVTTDISPTIKLTLHNAGHVLGSAIAHLHIGEGLYNLAYTGDIKFETSRLLEPA 362 Query: 195 LEKLQNLDFLIID 207 + + L+ LII+ Sbjct: 363 VCQFPRLETLIIE 375 >gi|331267202|ref|YP_004326832.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326683874|emb|CBZ01492.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|323697620|ref|ZP_08109532.1| metallo-beta-lactamase family protein [Desulfovibrio sp. ND132] gi|323457552|gb|EGB13417.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans ND132] Length = 417 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 22/146 (15%) Query: 45 SRVSERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S V + T +++D G D L + + VL +H H DH +G+ Sbjct: 15 SCVEVEYNGTRLLLDAGTPLDDSPAALPADIDAYAGVLISHSHQDH-YGLVERLP----- 68 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + +Y M + F + NPI +E G I Sbjct: 69 -EDVPLY-----MGKVAWQFAQSLRLFTKTGDLLTHNPIPLEAGK-----TFRVGDISVT 117 Query: 163 PILQQHGRISSLGFRF---GNVAYCT 185 P L H + GF G V Y T Sbjct: 118 PYLADHSSPDAFGFLLEAGGRVVYYT 143 >gi|322377300|ref|ZP_08051792.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] gi|321282013|gb|EFX59021.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|315612260|ref|ZP_07887174.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315315653|gb|EFU63691.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|307707799|ref|ZP_07644276.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] gi|307616059|gb|EFN95255.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|289168787|ref|YP_003447056.1| hydrolase [Streptococcus mitis B6] gi|288908354|emb|CBJ23196.1| hydrolase [Streptococcus mitis B6] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|269127515|ref|YP_003300885.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268312473|gb|ACY98847.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 561 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F + +R+++ ++AV+ TH H DHI G+ + Sbjct: 40 GGRLLIIDCGVLFPEEEQPGVDLILPDFDYIRDRLDQVEAVVLTHGHEDHIGGV----PF 95 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 L+++ I + + + + Sbjct: 96 LLRERADIPLVGSRLTLALIEAK 118 >gi|262172629|ref|ZP_06040307.1| metallo-beta-lactamase family protein RNA-specific [Vibrio mimicus MB-451] gi|261893705|gb|EEY39691.1| metallo-beta-lactamase family protein RNA-specific [Vibrio mimicus MB-451] Length = 438 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 8/80 (10%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ S R +++D G D + V ++ ++ TH H DHI + L Sbjct: 11 SVTGSCHELRSDGQALLIDCGLFQGADERSLEIDFAVNHLNGLVLTHAHIDHIGRLPWLL 70 Query: 97 GYFLKQKRPIDVYAAPDCMK 116 Q ++ + Sbjct: 71 AAGFNQ----PIFCTAATAE 86 >gi|227891718|ref|ZP_04009523.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741] gi|227866521|gb|EEJ73942.1| beta-lactamase superfamily I metal-dependent hydrolase [Lactobacillus salivarius ATCC 11741] gi|300213972|gb|ADJ78388.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus salivarius CECT 5713] Length = 267 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 55/224 (24%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V+VD G + M + + +D++L TH H+DHI G+ L ++ + Sbjct: 25 PKSKVLVDAGLSGKKIEELMNSIGRTLKDVDSLLVTHEHSDHIKGVG-----VLARRYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV----PICMKSAGGVI--- 159 ++YA + P+ + + + ++S G Sbjct: 80 NIYANQGTWDAMSAKIGKV----------PLEQKHIFDMGKTLSIGDVDIESFGVSHDAA 129 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 E HG+ + A TD P + N + + + L+ G Sbjct: 130 EPQFYELHHGK--------SSFAIVTDTGYVPDSVAGVINNAEAYLFECNHDTEMLRMGP 181 Query: 214 HS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD 243 +S H S + + ++++ N K L H+ + Sbjct: 182 YSWSLKQRIMSDTGHLSNDDGAAALMDVLGNNTKKIFLGHLSQE 225 >gi|148992712|ref|ZP_01822355.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|168489387|ref|ZP_02713586.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP195] gi|307126356|ref|YP_003878387.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 670-6B] gi|147928438|gb|EDK79453.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|183572015|gb|EDT92543.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP195] gi|306483418|gb|ADM90287.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 670-6B] gi|332075804|gb|EGI86271.1| ribonuclease J 1 [Streptococcus pneumoniae GA17570] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|322392476|ref|ZP_08065936.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] gi|321144468|gb|EFX39869.1| metallo-beta-lactamase superfamily protein [Streptococcus peroris ATCC 700780] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + + Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRNA 118 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I + + + I + H G+I G F+F Sbjct: 119 KLYE-INHNTELTFKHLKATFFKTTHSIPEPLGIVIHTPQGKIVCTGDFKFD 169 >gi|315924758|ref|ZP_07920975.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621657|gb|EFV01621.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] Length = 599 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 66/215 (30%), Gaps = 54/215 (25%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTT--------VIVDTGPDFYM-------------Q 67 + + + ++ R + + + E G N T +IVD G F Sbjct: 45 EASRKREKKLR-IIPVGGLGEIGKNMTAFQYGDEIIIVDCGLKFPDDDMYGIDTVLPDYS 103 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 L + + A++ TH H DHI GI YFLK+ +YA + + Sbjct: 104 YLEKNADKVKALVITHGHEDHIGGI----PYFLKRVNA-PIYATKLTVGLIDHK------ 152 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYC--- 184 L++ +I + G I H S+ A Sbjct: 153 -LEEHRLISKTKRHIISAGS-----EVTIGDFRVEFIHVNHSIADSVALCIKTPAATVFH 206 Query: 185 ----------TDVNAFPAESLEKL--QNLDFLIID 207 D + + + L + +D L+ D Sbjct: 207 TGDFKIDFHPVDGDIIDLQRIAALGNRGVDLLLCD 241 >gi|309789609|ref|ZP_07684190.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] gi|308228345|gb|EFO81992.1| beta-lactamase domain protein [Oscillochloris trichoides DG6] Length = 852 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 9/86 (10%) Query: 52 SNTTVIVDTGPDF----YMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V+VD G + L S+DA++ TH HADHI + + Sbjct: 22 GERRVLVDAGVRMDGADRLPDLAALAGVSLDAIIITHAHADHIGAL----PLVADRFPAT 77 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDR 132 +YA+P ++ + + + R Sbjct: 78 PIYASPATIRLMEVMLGDAVRVMARR 103 >gi|306828721|ref|ZP_07461913.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] gi|304428899|gb|EFM31987.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|300870385|ref|YP_003785256.1| putative phytochrome sensor protein [Brachyspira pilosicoli 95/1000] gi|300688084|gb|ADK30755.1| putative phytochrome sensor protein [Brachyspira pilosicoli 95/1000] Length = 289 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 76/250 (30%), Gaps = 47/250 (18%) Query: 50 RGSNTTVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +I+D G Y + E+ SI +L TH H DHI GI + K Sbjct: 28 DDEGNYIILDAGSGLKNLGYYALKSEKKESI--ILLTHFHWDHIIGIPFFAPF-YSNKYS 84 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG--GVIEAIP 163 +Y D + ++E+ +P + P G + Sbjct: 85 FTIYGPKDNHEEMYETINNILAKD---YFPINLEQFGASIKFEPFYEGKKINYGNMTVEA 141 Query: 164 ILQQHGRISSLGFRF----GNVAYCTD---------------------VNAFPAESLEKL 198 + H +L ++ + Y TD N A ++ + Sbjct: 142 LWVNH-PCYTLSYKITSNDKTLVYLTDHEPYKKRLHIQHPSLDHYNNNANLLHARLIDYV 200 Query: 199 QNLDFLIIDA-------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLK 251 + + LII+ + + H +L+++++ I H H + D Sbjct: 201 RGANVLIIEGEYTKSEYINGHVGWGHSTLNDAIQVGLDAEVPYVI-IH-HHNQDRTDAQI 258 Query: 252 STPSRVVPAF 261 + AF Sbjct: 259 KLIYNKLLAF 268 >gi|295703687|ref|YP_003596762.1| metallo-beta-lactamase domain-containing protein [Bacillus megaterium DSM 319] gi|294801346|gb|ADF38412.1| metallo-beta-lactamase domain protein [Bacillus megaterium DSM 319] Length = 557 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F + L+E + A++ TH H DHI GI Y Sbjct: 29 DDDIIVIDCGSKFPDESLLGIDLIIPDITYLQENREKVRALVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + +YA + + D + ++ E ++ + G Sbjct: 85 LLKQLN-LPIYATSLTLGLI-----------DIKLQEHQLSAET-ELIEINEESEITLGN 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F G V + D Sbjct: 132 IPLSFFKTNHSIPDCLGIVFHTPEGAVVHTGDFK 165 >gi|227889851|ref|ZP_04007656.1| ribonuclease Z [Lactobacillus johnsonii ATCC 33200] gi|227849715|gb|EEJ59801.1| ribonuclease Z [Lactobacillus johnsonii ATCC 33200] Length = 309 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + +V++ + + H R+ S GFR Sbjct: 102 TSLR---VSKTRVSYP--IKYVVLKEDGLIFENDI----FAVYTARLDH-RVPSFGFRV 150 >gi|226357159|ref|YP_002786899.1| metallo-beta-lactamase family protein [Deinococcus deserti VCD115] gi|226319149|gb|ACO47145.1| putative Metallo-beta-lactamase superfamily protein; putative Zinc metallohydrolase, glyoxalase II family [Deinococcus deserti VCD115] Length = 299 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 16/152 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYM--QVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYF 99 S V E G +++DTG D ++LR S A+L TH HADH G + Sbjct: 20 SVVVENGEGGALLIDTGLDDAHARKLLRAVESAGLSPSAILNTHSHADHHGG----NAFI 75 Query: 100 LKQKRPIDVYAAP---DCMKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMKS 154 LK+ + VYA P + H F + ++ P P Sbjct: 76 LKKSPELTVYAPPLEAAVINHPMLEPLMLFGASPPPELRTKFLLAPASPAQPIPPGRQIL 135 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 G ++ IP+ + + G V Y D Sbjct: 136 GGVELDLIPVPGH--AVDMYAVQLGEVLYVAD 165 >gi|254480561|ref|ZP_05093808.1| hydroxyacylglutathione hydrolase [marine gamma proteobacterium HTCC2148] gi|214039144|gb|EEB79804.1| hydroxyacylglutathione hydrolase [marine gamma proteobacterium HTCC2148] Length = 257 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Query: 43 KISRVSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + G++ +VD G + Q L E+ L + VL TH H DH+ G+ L+ + Sbjct: 14 YIWLICIDGTDQAYVVDPGDAEVVEQALEERQLQLTGVLITHHHFDHVGGLADLKAKYNP 73 Query: 102 QKRPIDVYAAPD 113 VY + Sbjct: 74 V-----VYGPDN 80 >gi|170697088|ref|ZP_02888183.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] gi|170137924|gb|EDT06157.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] Length = 287 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Query: 44 ISRVSERGSNTTVIVDTGP--------DFYMQVLREQV--LSIDAVLYTHPHADHIHGID 93 I+ RG+ TV+VDTG + + ID +L TH H DHI G+ Sbjct: 60 INCYVIRGNGRTVLVDTGAGGIRNWGGRLRASLAHAGIDARDIDTILLTHAHPDHIGGLL 119 Query: 94 G 94 Sbjct: 120 D 120 >gi|116516160|ref|YP_815649.1| metallo-beta-lactamase domain-containing protein [Streptococcus pneumoniae D39] gi|194398194|ref|YP_002036841.1| hypothetical protein SPG_0126 [Streptococcus pneumoniae G54] gi|225860170|ref|YP_002741679.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230182|ref|ZP_06963863.1| hypothetical protein SpneCMD_05881 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255776|ref|ZP_06979362.1| hypothetical protein SpneCM_09328 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501932|ref|YP_003723872.1| metallo-beta-lactamase [Streptococcus pneumoniae TCH8431/19A] gi|116076736|gb|ABJ54456.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae D39] gi|194357861|gb|ACF56309.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|225726774|gb|ACO22625.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298237527|gb|ADI68658.1| metallo-beta-lactamase [Streptococcus pneumoniae TCH8431/19A] gi|301793414|emb|CBW35781.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] gi|327390542|gb|EGE88882.1| ribonuclease J 1 [Streptococcus pneumoniae GA04375] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|300115297|ref|YP_003761872.1| metallo-beta-lactamase superfamily protein [Nitrosococcus watsonii C-113] gi|299541234|gb|ADJ29551.1| metallo-beta-lactamase superfamily protein [Nitrosococcus watsonii C-113] Length = 315 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 61/216 (28%), Gaps = 31/216 (14%) Query: 58 VDTGP-----DFYMQVLREQV--LSIDAVLYTHPHADHIHG-------IDGLRGYFLKQK 103 +DTGP ++ ++ ID +L TH H DH G + + + Sbjct: 39 IDTGPTPSVSRLMDALVTLKITPQQIDYILLTHIHLDHAGGAGELVRRLPRAQVVVHPRG 98 Query: 104 RP--IDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 P ID + + F+ L P + I+ + + + + Sbjct: 99 APHLID---PQKLIAGTKAVYGDKIFRRLYGEVVPIPADRIITPEDGAWLELGGSRLEFI 155 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 P H R + D + L I A HF Sbjct: 156 HTPGHALHHYCIID--RDSRSIFAGDTFGISYRDFDTLAGA--FIFPATT----PIHFDP 207 Query: 221 SESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + IE + P+ LTH D + K Sbjct: 208 DAAHASIERLMGYEPEGIYLTHYSQVTDLQRLAKDL 243 >gi|227815538|ref|YP_002815547.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. CDC 684] gi|227006742|gb|ACP16485.1| RNA-metabolising metallo-beta-lactamase [Bacillus anthracis str. CDC 684] Length = 157 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 18/80 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D G F + L+E I ++ TH H DHI GI Y Sbjct: 29 ENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQENKEKIRGLVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 FLKQ + +YA + + Sbjct: 85 FLKQLN-VPIYATRLTLGLI 103 >gi|146296058|ref|YP_001179829.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409634|gb|ABP66638.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 751 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 40/218 (18%) Query: 36 RRTRSSLKISRVSERGSNT----TVIVDTGP---DF-------YMQVLREQVLSIDAVLY 81 R S+ E T ++++DTGP DF +L+ V ID ++ Sbjct: 507 NRLNISVIDVGQGESSLITYKGFSMLIDTGPTNEDFSSLKRIVLPYILKNNVSKIDVLVL 566 Query: 82 THPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI 141 TH H DHI D L + K + + + + E L R I Sbjct: 567 THKHNDHIGDFDYLLN---EMKVRV-IVTSREVYTENIEK-------LKGRYVVLIDKLK 615 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQ 199 D+ + P+ Q GN + + D + + K Sbjct: 616 GFSYKDLKVFF--------FPPVEQDSNSSVVTKIVLGNFSMLFTGDASYESEKEYIKKF 667 Query: 200 NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAIL 237 NL + LK G H S + + S + +E + PK A++ Sbjct: 668 NLRATV---LKVGHHGS--NTATSEEFLESVAPKVAVI 700 >gi|307719364|ref|YP_003874896.1| hypothetical protein STHERM_c16850 [Spirochaeta thermophila DSM 6192] gi|306533089|gb|ADN02623.1| hypothetical protein STHERM_c16850 [Spirochaeta thermophila DSM 6192] Length = 288 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 69/226 (30%), Gaps = 40/226 (17%) Query: 52 SNTTVIVDTGPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + ++VD G Q L E V I L+TH HADHI G + + KR Sbjct: 44 NEQHLLVDCGTR-GTQALHELGLSVGEIQHYLFTHSHADHIGGAEEIMLVNRYMKRRRPH 102 Query: 109 YAAPDCMKHLF--ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 P + L ES + + + P +N P + I Sbjct: 103 LYIPRAYQRLLWNESLKGGSAYSERHPFKPHLNLEDFFVIHTPRLLFKKPRPI----YQI 158 Query: 167 QHGRISSLGFR----------FGNVAYCT------------DVNAFPAESLEKLQ---NL 201 G + L +R + A+ T D F E + L Sbjct: 159 WVGDMDILLYRTIHIPEQARSWKEAAWSTGLLIDRRILFTGDT-RFDPEIITYFHEHYPL 217 Query: 202 DFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYD 247 + + D + H S E + I K L MH D++ Sbjct: 218 EVIFHDC-QFFDGGVHASFEELCTLPDEIKAK-TFL--MHYGDDWE 259 >gi|301801087|emb|CBW33755.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|301299918|ref|ZP_07206149.1| metallo-beta-lactamase domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852463|gb|EFK80116.1| metallo-beta-lactamase domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 267 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 61/249 (24%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V+VD G + M + + +D++L TH H+DHI G+ L ++ + Sbjct: 25 PKSKVLVDAGLSGKKIEELMNSIGRTLKDVDSLLVTHEHSDHIKGVG-----VLARRYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV----PICMKSAGGVI--- 159 ++YA + P+ + + + ++S G Sbjct: 80 NIYANQGTWDAMSAKIGKV----------PLEQKHIFDMGKTLSIGDVDIESFGVSHDAA 129 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 E HG+ + A TD P + N + + + L+ G Sbjct: 130 EPQFYELHHGK--------SSFAIVTDTGYVPDSVAGVINNAEAYLFECNHDTEMLRMGP 181 Query: 214 HS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD-----LDYDMVLKSTP 254 +S H S + + ++++ N K L H+ + L + V Sbjct: 182 YSWSLKQRIMSDTGHLSNDDGAAALMDVLGNNTKKIFLGHLSQENNVKALAHVTVEDIMK 241 Query: 255 SR-VVPAFD 262 + D Sbjct: 242 EHDLAVGHD 250 >gi|254776082|ref|ZP_05217598.1| hypothetical protein MaviaA2_15620 [Mycobacterium avium subsp. avium ATCC 25291] Length = 558 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI GI Sbjct: 35 EHLGRLLIIDCGVMFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGGI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y LK + I V + + + + + P+ +E ++ KS Sbjct: 91 --PYLLKLRPDIPVVGSKFTLALVAA-----------KCREHRLKPVFVEVSE---GHKS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 THGVFECEYFAVNHSIPDALA 155 >gi|168487077|ref|ZP_02711585.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae CDC1087-00] gi|183570017|gb|EDT90545.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus pneumoniae CDC1087-00] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|120406741|ref|YP_956570.1| ribonuclease Z [Mycobacterium vanbaalenii PYR-1] gi|119959559|gb|ABM16564.1| RNAse Z [Mycobacterium vanbaalenii PYR-1] Length = 304 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 83/317 (26%), Gaps = 78/317 (24%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M G + VP T +N R + + D Sbjct: 1 MSGRELIVF---GTASQVP-----------TRHRNHNG--------YLLRWDDEGFLFDP 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMK 116 G Q+L V ++ + TH H DH G+ G+ R + RP+ Y + Sbjct: 39 GEGTQRQMLLAGVSPTAVTRMCITHLHGDHCLGVPGIIQRLSLDRVVRPVQAYYPASGRE 98 Query: 117 HL-FESFRYCFKALDDRTYPPIVNPIVI--------ENNDVPICMKSAGGVI------EA 161 + F + D P+ I E + + + G + Sbjct: 99 YFARLRHASVFHDVTDVREMPVDAEGAIADGPFGTLEARRLDHPVDAVGYRVVEPDGDRF 158 Query: 162 IPILQ--------QHGRISSLGF-----------------RFGNVAYCTDVNAFPAESLE 196 +P L + G++ G R A+ D Sbjct: 159 VPELLAQFGVAGPEVGQLQRAGLLRRGTQTVRLSDVTRSRRGQRFAFVMDT-RLCDGVYA 217 Query: 197 KLQNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLD----- 245 D L+I+A H + ++ + + +LTH Sbjct: 218 LADGADLLVIEATFLDSDADLAARYGHLTARQAAQVATECGVRRLVLTHFSQRYPDMRGH 277 Query: 246 YDMVLKSTPSRVVPAFD 262 +D +V A D Sbjct: 278 HDEARAVFDGDLVLAED 294 >gi|41408961|ref|NP_961797.1| hypothetical protein MAP2863c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397320|gb|AAS05180.1| hypothetical protein MAP_2863c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 558 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI GI Sbjct: 35 EHLGRLLIIDCGVMFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGGI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y LK + I V + + + + + P+ +E ++ KS Sbjct: 91 --PYLLKLRPDIPVVGSKFTLALVAA-----------KCREHRLKPVFVEVSE---GHKS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 THGVFECEYFAVNHSIPDALA 155 >gi|15900063|ref|NP_344667.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|111658060|ref|ZP_01408761.1| hypothetical protein SpneT_02000749 [Streptococcus pneumoniae TIGR4] gi|148987864|ref|ZP_01819327.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|148996545|ref|ZP_01824263.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|149005877|ref|ZP_01829606.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|149010998|ref|ZP_01832303.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|149017802|ref|ZP_01834261.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168483772|ref|ZP_02708724.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC1873-00] gi|168492405|ref|ZP_02716548.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC0288-04] gi|168493832|ref|ZP_02717975.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC3059-06] gi|168576442|ref|ZP_02722325.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae MLV-016] gi|169833533|ref|YP_001693657.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|221231053|ref|YP_002510205.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225853753|ref|YP_002735265.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae JJA] gi|225858001|ref|YP_002739511.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 70585] gi|237649787|ref|ZP_04524039.1| hypothetical protein SpneC1_03499 [Streptococcus pneumoniae CCRI 1974] gi|237821485|ref|ZP_04597330.1| hypothetical protein SpneC19_04087 [Streptococcus pneumoniae CCRI 1974M2] gi|303255166|ref|ZP_07341242.1| hypothetical protein CGSSpBS455_06806 [Streptococcus pneumoniae BS455] gi|303259179|ref|ZP_07345157.1| hypothetical protein CGSSp9vBS293_02262 [Streptococcus pneumoniae SP-BS293] gi|303260936|ref|ZP_07346885.1| hypothetical protein CGSSp14BS292_02143 [Streptococcus pneumoniae SP14-BS292] gi|303263262|ref|ZP_07349185.1| hypothetical protein CGSSpBS397_02811 [Streptococcus pneumoniae BS397] gi|303265427|ref|ZP_07351327.1| hypothetical protein CGSSpBS457_01237 [Streptococcus pneumoniae BS457] gi|303268015|ref|ZP_07353817.1| hypothetical protein CGSSpBS458_11273 [Streptococcus pneumoniae BS458] gi|307066807|ref|YP_003875773.1| putative metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae AP200] gi|14971589|gb|AAK74307.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|147757120|gb|EDK64159.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|147762233|gb|EDK69194.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|147764634|gb|EDK71564.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|147926328|gb|EDK77401.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|147931366|gb|EDK82344.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168996035|gb|ACA36647.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|172042859|gb|EDT50905.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC1873-00] gi|183573414|gb|EDT93942.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC0288-04] gi|183576199|gb|EDT96727.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CDC3059-06] gi|183577806|gb|EDT98334.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae MLV-016] gi|220673513|emb|CAR67993.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225720785|gb|ACO16639.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae 70585] gi|225723536|gb|ACO19389.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae JJA] gi|302597996|gb|EFL65066.1| hypothetical protein CGSSpBS455_06806 [Streptococcus pneumoniae BS455] gi|302637773|gb|EFL68259.1| hypothetical protein CGSSp14BS292_02143 [Streptococcus pneumoniae SP14-BS292] gi|302639597|gb|EFL70054.1| hypothetical protein CGSSpBS293_02262 [Streptococcus pneumoniae SP-BS293] gi|302642711|gb|EFL73056.1| hypothetical protein CGSSpBS458_11273 [Streptococcus pneumoniae BS458] gi|302644867|gb|EFL75114.1| hypothetical protein CGSSpBS457_01237 [Streptococcus pneumoniae BS457] gi|302647035|gb|EFL77259.1| hypothetical protein CGSSpBS397_02811 [Streptococcus pneumoniae BS397] gi|306408344|gb|ADM83771.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pneumoniae AP200] gi|332076577|gb|EGI87039.1| ribonuclease J 1 [Streptococcus pneumoniae GA17545] gi|332077436|gb|EGI87897.1| ribonuclease J 1 [Streptococcus pneumoniae GA41301] Length = 559 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|313239392|emb|CBY14331.1| unnamed protein product [Oikopleura dioica] Length = 371 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 30/127 (23%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D T LG P +R ++ R + +VD Sbjct: 1 MSD-LQVTCLGT----------------ASQQPSVKR-----ALNSCVYRNKGISYLVDC 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR------PIDVYAAP 112 G Q+ V SI VL TH H DH G+ K+ I+VY Sbjct: 39 GEGTQAQLNASGVRPSSIKTVLITHLHGDHCFGLPDTGSLLEAVKKVKYEYPTIEVYGPV 98 Query: 113 DCMKHLF 119 ++L Sbjct: 99 GLRRYLR 105 >gi|306818232|ref|ZP_07451962.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239] gi|304648971|gb|EFM46266.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239] Length = 564 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 36/140 (25%) Query: 52 SNTTVIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F ++ +++++ + ++ TH H DHI + Y Sbjct: 40 EGKILIIDCGVLFPEEIQPGVDLILPDFSYIKDRINQVVGMVLTHGHEDHIGAV----PY 95 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA--- 155 FLK + I VY + + P + + ++ + + Sbjct: 96 FLKHRSDIPVYGSGLTLA----------------LVEPKLQEHRLPVTNLRVKTEGQRLD 139 Query: 156 GGVIEAIPILQQHGRISSLG 175 G H +L Sbjct: 140 LGPFHLEFCAVNHSIPDALA 159 >gi|289435513|ref|YP_003465385.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171757|emb|CBH28303.1| metallo-beta-lactamase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 205 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I+D G + + ++ ++ A+L TH H DHI ++ +R + I Sbjct: 22 DGLALIIDPGAE--ANKIEAEIAKLEVTPVAILLTHCHYDHIGALEEIRATY-----SIP 74 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY +P L + P + P E ++ + P Sbjct: 75 VYVSPKEQSWLSS--PELNLSAHIAGTPIVARPAEHEFTLGDYNIEGFHFKVVPTP---G 129 Query: 168 HGRISSLGFRFGNVAYCTD 186 H I SL F F + D Sbjct: 130 HS-IGSLSFIFADFVIVGD 147 >gi|254302192|ref|ZP_04969550.1| possible hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322384|gb|EDK87634.1| possible hydrolase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 399 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 54/169 (31%), Gaps = 35/169 (20%) Query: 53 NTTVIVDTGPDFYM--------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 NT +I+D G + + L + D VL +H H DHI G K Sbjct: 23 NTKIILDIGSNLDDKEIIIPEIEGLFKGKPKYDGVLISHYHGDHI-------GLATKILP 75 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 I +Y + S Y K + E + G I+ IP Sbjct: 76 EISIYMGEKSYEIHKVSNEYIGKE------------YLKEPKTFKTEEEFLIGDIKIIPY 123 Query: 165 LQQHGRISSLGFRFG----NVAYCTDVNAFPAESLE----KLQNLDFLI 205 L H S F + Y D + +S E KL +D LI Sbjct: 124 LCDHSAFDSYMFLLDCEGKKILYTGDFRSNGRKSFEPLLRKLPKVDVLI 172 >gi|146423725|ref|XP_001487788.1| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC 6260] Length = 736 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 54/175 (30%), Gaps = 45/175 (25%) Query: 37 RTRSSL----KISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 RTR+ + + S V+VD SI TH HADH GI Sbjct: 220 RTRTPIPQLKIMDFPVVENSTYKVLVDAFSF-------APHESISQYFLTHFHADHYGGI 272 Query: 93 DGLRGYFL-----------KQKRPIDVYAAPDCMKHLFESFR--------------YCFK 127 Y + R I +YA+ + L F YC K Sbjct: 273 TKKWSYNRVFSSLEEYEDETKFRRI-IYASEVTSRLLTLRFGIDPRFIKDLKFDTRYCVK 331 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 DD P ++ D + + PI H +++ F F +++ Sbjct: 332 FYDDSGSP-------VDVQDGGYESNDSVPGLYVTPITANHCPGAAI-FLFESIS 378 >gi|139473132|ref|YP_001127847.1| Zn-dependent hydrolase [Streptococcus pyogenes str. Manfredo] gi|134271378|emb|CAM29598.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes str. Manfredo] Length = 560 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + + Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLWREA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + ++ + I + H G+I G F+F Sbjct: 120 TVYE-INHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFD 170 >gi|121601638|ref|YP_989085.1| putative RNA-metabolising metallo-beta-lactamase [Bartonella bacilliformis KC583] gi|120613815|gb|ABM44416.1| putative RNA-metabolising metallo-beta-lactamase [Bartonella bacilliformis KC583] Length = 558 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 64/219 (29%), Gaps = 51/219 (23%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +S +I+ PD L + +I ++ TH H DH + L K Sbjct: 44 VSFAGPELPGANLIL---PDIR--FLENEKHNICGLVLTHAHEDHYGAVLDLWP-----K 93 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I VY P L + I N G Sbjct: 94 LQIPVYCTPFTAGLL------------ESKRQSDFKFRQIPLNIFQAGDCFQVGSFSIEA 141 Query: 164 ILQQH--------------GRISSLG-FRFG---NVAYCTDVNAFPAESLEKLQNLDFLI 205 I H G + G ++ ++ TD + L L L Sbjct: 142 IAVNHSIPEAVSLAITTSLGNLIHTGDWKIDHTPSLGTITD-----EKRLRALGKRGILA 196 Query: 206 I-----DALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 + +A ++G+ S + ESL + I + AI+T Sbjct: 197 LLCDSTNAFQDGISPSEQDVQESLVEIIARAEGRVAIVT 235 >gi|326388470|ref|ZP_08210066.1| Arylsulfatase [Novosphingobium nitrogenifigens DSM 19370] gi|326207202|gb|EGD58023.1| Arylsulfatase [Novosphingobium nitrogenifigens DSM 19370] Length = 316 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 83/265 (31%), Gaps = 47/265 (17%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 K +LG G P + R S + +++D G Sbjct: 35 KSGITLQLLGSGG----PV------------SDDARASSGAVVWIDG----KARLLIDAG 74 Query: 62 PD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPIDVYAA------ 111 ++ +D + +H H DH+ + + YFL + + + Sbjct: 75 GGTYLRYGQTGARLEDLDFIGISHFHTDHVADLPAILKGAYFLSGRHDVALVGPGGNANF 134 Query: 112 PDCMKHLFESFRY---CFKALDDRTYPPIVNPIVIENNDVPICMKSA-----GGVIEAIP 163 P F F+ L + + + ++V + A G + Sbjct: 135 PSMTAFFDREFGRGHGAFEYLAGLSGGTDGLNLSVHPSNVNVASPVATKVWQGDGVTISA 194 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--- 216 + HG + +L +R G + D N E ++ + D L++ A + + Sbjct: 195 LGIPHGDVPALAYRIDTPKGVMVLSADQNGSRKEFIDFAKGADLLMMPAAIDDDADAQSR 254 Query: 217 --HFSLSESLKKIELINPKNAILTH 239 H + + K I+PK +L H Sbjct: 255 FLHATPTVVGKIAAQIHPKMLVLDH 279 >gi|317487115|ref|ZP_07945919.1| tat pathway signal sequence [Bilophila wadsworthia 3_1_6] gi|316921627|gb|EFV42909.1| tat pathway signal sequence [Bilophila wadsworthia 3_1_6] Length = 382 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 17/129 (13%) Query: 41 SLKISRVSERGSNTTVIVDTG--PDFYMQVL-REQVL------SIDAVLYTHPHADHIHG 91 S + S G T + DTG D+ RE + IDA + TH H DH G Sbjct: 136 SCLVEIESMEGETTRYLFDTGWNYDWMDTCFKREGIDVMLADNKIDAFIQTHEHMDHYWG 195 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP----IVIENND 147 K I VY E + C P ++ + + D Sbjct: 196 F----PVVTKYNPNIHVYTPNTFYPAGKEYLKACGHVGKWTEVPKGLHTLQPGVALYQFD 251 Query: 148 VPICMKSAG 156 PI K G Sbjct: 252 CPIIFKVFG 260 >gi|307265251|ref|ZP_07546809.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919695|gb|EFN49911.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 614 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 17/91 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTG-----PDFYMQVLRE---QVLSIDAVLYTHPHADHIHG 91 SS +S +++D G Y ++ + ID V+ TH H DH G Sbjct: 214 SSYLVSY-----EGINILLDAGALIKDKTLYYNSIKNLPIDIKDIDLVIITHAHLDHFGG 268 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 I L L + + + L + F Sbjct: 269 IVELLRKGLNS----PIIMSRATHEILRQIF 295 >gi|294498338|ref|YP_003562038.1| metallo-beta-lactamase domain-containing protein [Bacillus megaterium QM B1551] gi|294348275|gb|ADE68604.1| metallo-beta-lactamase domain protein [Bacillus megaterium QM B1551] Length = 557 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F + L+E + A++ TH H DHI GI Y Sbjct: 29 DDDIIVIDCGSKFPDESLLGIDLIIPDITYLQENREKVRALVVTHGHEDHIGGI----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + +YA + + D + ++ E ++ + G Sbjct: 85 LLKQLN-LPIYATSLTLGLI-----------DIKLQEHQLSAET-ELIEINEESEITLGN 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H LG F G V + D Sbjct: 132 IPLSFFKTNHSIPDCLGIVFHTPEGAVVHTGDFK 165 >gi|289177471|gb|ADC84717.1| Metal-dependent hydrolase [Bifidobacterium animalis subsp. lactis BB-12] Length = 641 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ +DA++ TH H DHI G+ Y L Sbjct: 111 LLIDCGVLFPEEEQPGVDLILPDF--NYIKDRLDKVDALVLTHGHEDHIGGV----PYLL 164 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + F R + +E D K G Sbjct: 165 KMRPDIPLIGSKLTLG---------FVEAKCREHRIEPVMTQVEGRD-----KLKVGPFN 210 Query: 161 AIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L A D + L KL Q +D L+ Sbjct: 211 LEFVSVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRVTDLVEFGKLGEQGIDLLM 270 Query: 206 ID 207 +D Sbjct: 271 MD 272 >gi|224543293|ref|ZP_03683832.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] gi|224523826|gb|EEF92931.1| hypothetical protein CATMIT_02493 [Catenibacterium mitsuokai DSM 15897] Length = 203 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +T VI+D G + MQ + L + +L TH H DHI ++ L+ Y+ D Sbjct: 18 SCGHTCVIIDPGDEANHIMQEIENDHLEVKGILVTHGHFDHIGAVNELKAYYHT-----D 72 Query: 108 VYAAPDCMKHLFE 120 VYA D + Sbjct: 73 VYATKDTKDMMLN 85 >gi|222479397|ref|YP_002565634.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452299|gb|ACM56564.1| beta-lactamase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 641 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 47/151 (31%), Gaps = 25/151 (16%) Query: 52 SNTTVIVDTGPDF-------YMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 T V++D G Y+Q L ++DAV+ TH H DH K Sbjct: 203 PETRVLIDCGDKPGAEGEVPYLQVPEALGAGAATLDAVVLTHAHLDHSA----FVPLLFK 258 Query: 102 QKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y + + Y A + PP + V E + + G + Sbjct: 259 YGYDGPIYTTEPTRDLMGLLTLDYLDVAAKEGRTPPYESSQVREA--IKHTIPLEYGDVT 316 Query: 161 AIPILQQ---HGRISSLG-----FRFGNVAY 183 I + H LG F G+ Y Sbjct: 317 DIAPDVKLTFHNAGHILGSSVTHFHIGDGLY 347 >gi|329667466|gb|AEB93414.1| beta-lactamase superfamily hydrolase [Lactobacillus johnsonii DPC 6026] Length = 309 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + +V++ + + H R+ S GFR Sbjct: 102 TSLR---VSKTRVSYP--IKYVVLKEDGLIFENDI----FAVYTARLDH-RVPSFGFRV 150 >gi|319946203|ref|ZP_08020443.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] gi|319747585|gb|EFV99838.1| metallo-beta-lactamase superfamily protein [Streptococcus australis ATCC 700641] Length = 560 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 21/140 (15%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E + + VL TH H DHI GI FL + Sbjct: 35 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENIDRVKGVLITHGHEDHIGGIP-----FLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + + Y N + + ++ + E + Sbjct: 90 QANVPIYAGPLALALIRGKLEEHGLLRGAKLYEINQNTELTFKHIKATFFRTTHSIPEPL 149 Query: 163 PILQQH--GRISSLG-FRFG 179 I+ G+I G F+F Sbjct: 150 GIVLHTPQGKIVCTGDFKFD 169 >gi|182683094|ref|YP_001834841.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|182628428|gb|ACB89376.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] Length = 559 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|172037162|ref|YP_001803663.1| hypothetical protein cce_2247 [Cyanothece sp. ATCC 51142] gi|171698616|gb|ACB51597.1| hypothetical protein cce_2247 [Cyanothece sp. ATCC 51142] Length = 257 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 60/195 (30%), Gaps = 14/195 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPID-- 107 + +++D G D + +E D + +H H+DH G+ G K D Sbjct: 30 TGKKLLIDCGSDLRFSLHKEGFSHRDITDIYISHLHSDHAGGL-EYVGLTTKFDPRCDKP 88 Query: 108 -VYAAPDCMKHLFE---SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +Y + D ++E S + N ++NN +++ I Sbjct: 89 NLYLSHDIASKIWENTLSGGMGSIEGTITSLESFFNVHAVDNNRCFSWQNINFELVKTIH 148 Query: 164 ILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHF 218 I + + G F + +D E Q D + D H Sbjct: 149 INNGTYVMPTYGLFFEVNHQKIFITSDTQLCYQELETYYQKADIIFHDCETSKYPTPVHS 208 Query: 219 SLSESLKKIELINPK 233 E +K I K Sbjct: 209 HYQELVKLPNQIKGK 223 >gi|12322123|gb|AAG51097.1|AC025295_5 hypothetical protein, 5' partial [Arabidopsis thaliana] Length = 55 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Query: 223 SLKKIELINPKNAILTHMHVDLDYDMVLKSTPS-------RVVPAFDGMQF 266 +L I+ ++PK A+L M + D+ + V A DG++ Sbjct: 1 TLDTIKRLSPKRALLIGMTHEFDHHKDNEFLEEWSKREGISVKLAHDGLRV 51 >gi|312863312|ref|ZP_07723550.1| ribonuclease J 1 [Streptococcus vestibularis F0396] gi|322516007|ref|ZP_08068945.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] gi|311100848|gb|EFQ59053.1| ribonuclease J 1 [Streptococcus vestibularis F0396] gi|322125542|gb|EFX96883.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] Length = 560 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V + A++ TH H DHI GI FL + Sbjct: 37 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRVKALVITHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 92 QANIPIYAGPLALALIKGKLEEHGLLRDAQLYEINANTELTFKNMSVTFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 152 GIVIHTP----QGKIVCTGDFKFD 171 >gi|298252949|ref|ZP_06976743.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis 5-1] gi|297533313|gb|EFH72197.1| mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) [Gardnerella vaginalis 5-1] Length = 675 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 21/135 (15%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 151 LLIDCGVLFPEEEQPGVDLILPDF--HYIQDRLDKVEALVLTHGHEDHIGGV----PYLL 204 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + V N I + + Sbjct: 205 KMRPDIPLIGSKLTLAFVEAKCQEHHIEPKLTRVEGRDKMKVGPFNLEFITVTHSIPDAL 264 Query: 161 AIPILQQHGRISSLG 175 A+ + G + G Sbjct: 265 AVCVKTPAGTLIDTG 279 >gi|295093728|emb|CBK82819.1| RNAse Z [Coprococcus sp. ART55/1] Length = 304 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 26/88 (29%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 +LG G + +P R +SL + +++D G Sbjct: 6 LLGTGGMMPLP----------------YRALTSLVVRYNGHE-----MLIDCGEGTQTSM 44 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGI 92 Q + ID + +TH HADHI G+ Sbjct: 45 RQQGM-IGFKQIDVICFTHFHADHISGL 71 >gi|289434209|ref|YP_003464081.1| beta-lactamase domain lipoprotein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170453|emb|CBH26993.1| beta-lactamase domain lipoprotein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 376 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L +V ID +L THPHADHI D + Sbjct: 51 STLIQSEDGTTILIDTGRQDDDRILTYLKEAKVKKIDLLLLTHPHADHIGNADKIIA 107 >gi|168213627|ref|ZP_02639252.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] gi|170714967|gb|EDT27149.1| metallo-beta-lactamase family protein [Clostridium perfringens CPE str. F4969] Length = 284 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 83/206 (40%), Gaps = 25/206 (12%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +++D G + + +D ++ THPHADHI G++ + Sbjct: 46 SALIQ-----SNGKNLLIDAGTPESTKPLVKYLKNLGIKKLDFIIATHPHADHIGGMESI 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +A + F+ AL ++ I + ++ +PI + Sbjct: 101 IKKFHVNH----FFAPKVTENT--DVFKGMVTALKEKD---ININTLSKSKSLPIDLGEN 151 Query: 156 GGVIEAIPILQQHGRI----SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + P +++ I L +G ++ +A +E +++ + L D LK Sbjct: 152 TKIEIYSPSNKEYENINNYSPILKIYYGETSFLFTGDAETEAEMEAVKSNENLKSDVLKV 211 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 G H S S ++S ++ ++PK A++ Sbjct: 212 GHHGSTTSSTDS--FLKEVSPKIAVI 235 >gi|331701098|ref|YP_004398057.1| ribocuclease J [Lactobacillus buchneri NRRL B-30929] gi|329128441|gb|AEB72994.1| Ribocuclease J [Lactobacillus buchneri NRRL B-30929] Length = 561 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 47/147 (31%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F Q L E I A++ TH H DHI G+ Y +K Sbjct: 36 ILIDAGIKFPEDDLLGVDYVIPDYQYLVENKDKIKALVITHGHEDHIGGV----PYLMKV 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV---------PICMK 153 + +YA P M + L++ V I + V Sbjct: 92 LN-VPIYAGPLAMALIKNK-------LEEHGLLNSVELHEISDKSVLKFRKMKVSFFRTT 143 Query: 154 SAGGVIEAIPILQQHGRISSLG-FRFG 179 + I + G I G ++F Sbjct: 144 HSIPDTVGIAVHTPVGVIVETGDYKFD 170 >gi|289579460|ref|YP_003478087.1| beta-lactamase [Thermoanaerobacter italicus Ab9] gi|289529173|gb|ADD03525.1| beta-lactamase domain protein [Thermoanaerobacter italicus Ab9] Length = 317 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 22/204 (10%) Query: 41 SLKISRVSERGSNTTVIVDTG-PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I S T+++D G P+ +V+ + ID ++ THPH DHI GI Sbjct: 68 SIFIQTPS----GKTMLIDAGTPEMGSKVVNYIKSRGINKIDILIGTHPHNDHIGGIVE- 122 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV--NPIVIENNDVPICMK 153 +K + Y +F KA+ + V +VI+ D I Sbjct: 123 ---VIKTFKIGMFYMPKVT--TTTRTFEEVLKAIKSKGLSISVAKAGVVIDLGDGVIAKM 177 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL 213 A + + +GN ++ +A E L D L D LK G Sbjct: 178 LAPNSSHYEDLNNYSAVVKIT---YGNTSFLFTGDASEQSEKEMLSKGDNLKADVLKIGH 234 Query: 214 HSSHFSLSESLKKIELINPKNAIL 237 H S S + + ++ ++PK A++ Sbjct: 235 HGS--SSASTWAFLKAVHPKYAVI 256 >gi|258511440|ref|YP_003184874.1| beta-lactamase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478166|gb|ACV58485.1| beta-lactamase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 551 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 40/141 (28%), Gaps = 31/141 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F + L E I + TH H DHI G+ Y Sbjct: 29 GQDMIVVDAGLKFPDEDMLGIDIVIPDITFLVENREKIRGIFLTHGHEDHIGGL----PY 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L++ + VY + + R ++ + + G Sbjct: 85 VLREIN-VPVYGTRLTLGLVENKLREA-------------GVHDVKLITMDGKSRVQLGQ 130 Query: 159 IEAIPILQQHGRISSLGFRFG 179 P H ++GF Sbjct: 131 FAVSPFYVNHSIPDTVGFAIE 151 >gi|308808075|ref|XP_003081348.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri] gi|116059810|emb|CAL55517.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri] Length = 404 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 15/109 (13%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHLFESF-RYCFKALDD 131 I+AVL TH H DHI + + + P +YA M+ + Y D Sbjct: 49 DKIEAVLITHGHEDHIGAL----PWVIPALDPATPIYAGLFTMQLIKRRMLEYSLWNDDR 104 Query: 132 RTY-----PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 P +E V + G+I +HG I G Sbjct: 105 FKVFNMNERFQAGPFDMEAVRVTHSIPDCCGLI----FRSEHGTIVHTG 149 >gi|72387720|ref|XP_844284.1| cleavage and polyadenylation specificity factor subunit [Trypanosoma brucei TREU927] gi|62359436|gb|AAX79873.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei] gi|70800817|gb|AAZ10725.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 770 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 27/185 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + +V++D G L + ID VL TH H DH Sbjct: 52 RSCVVVRYKG-----RSVMLDCGNHPAKSGLDSLPFFDSIRCDEIDLVLITHFHLDHCGA 106 Query: 92 IDGLRGYFLKQKRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + + + ++ K + F + +D + + + V Sbjct: 107 LP---YFCEQTSFRGRIFMTSATKAFYKMVMNDFLRIGASAEDIVNNEWLQSTIEKIETV 163 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQ----N 200 + I P H + + F + Y D + P L + + Sbjct: 164 EYHEEVTVNGIHFQPFNAGH-VLGAALFMVDIAGMKLLYTGDFSRVPDRHLLGAEVPPYS 222 Query: 201 LDFLI 205 D LI Sbjct: 223 PDILI 227 >gi|306826059|ref|ZP_07459395.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431775|gb|EFM34755.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 559 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|300780582|ref|ZP_07090437.1| metal-dependent hydrolase [Corynebacterium genitalium ATCC 33030] gi|300533568|gb|EFK54628.1| metal-dependent hydrolase [Corynebacterium genitalium ATCC 33030] Length = 258 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 72/260 (27%), Gaps = 58/260 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGC SL P NP SS I + +++D GP Sbjct: 1 MKLTVLGCTGSLAAP-----------GNPG-----SSYLIETGANEPG---ILMDFGPGA 41 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-RPI-----------DVYAAP 112 + S +L++H HADH + ++ P Y Sbjct: 42 LAAMQEVADPSDAHLLFSHLHADHCS---DTASLCVWRRFHPTAPAGQRHKLCGPSYTPE 98 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + D + V+ ++ + P H Sbjct: 99 HIGRMCGDGPDDIADLSDTFDFQAWVSGKPVD-----------IDSVTVTPFPVVHPAAE 147 Query: 173 SLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDAL------KNGLHSSHFSL 220 S R G+ + + D + + ++ +N + + +A H S Sbjct: 148 SHALRVGHRDSGKVICFSGD-SCYTPTLIDAARNANLFLCEAAWGPYKGDGTPEGMHMSG 206 Query: 221 SESLKKIELINPKNAILTHM 240 E+ +L H+ Sbjct: 207 QEAGVIAREAGVDKLVLVHI 226 >gi|253682607|ref|ZP_04863404.1| metallo-beta-lactamase family protein [Clostridium botulinum D str. 1873] gi|253562319|gb|EES91771.1| metallo-beta-lactamase family protein [Clostridium botulinum D str. 1873] Length = 294 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 79/233 (33%), Gaps = 48/233 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 S+ + + +++D G + + + I+ V+ THPH DHI G+ Sbjct: 61 SILVQF-----NEKNLLIDAGCPNRKVYNYLKKCNIKKINYVIATHPHDDHIGGMT---- 111 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 ++ + PI+ + AP + + FK + + + + I S Sbjct: 112 -YIINRFPINNFLAPKAINNTPS-----FKKMITDLRKNNLKINLTKAGSY-IPFDSKLS 164 Query: 158 VIEAIP------ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII----- 206 P L + + + + + +C D E I+ Sbjct: 165 CFIVAPNNCNYKNLNNYSIVLRITYNKTSFLFCGDAENLSEEE----------ILNSGYN 214 Query: 207 ---DALKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 D LK G H S S S+S + +NPK AI++ + LK Sbjct: 215 ITSDVLKLGHHGSKTSTSDS--FLNEVNPKVAIISCGKGNDYGHPHKETLKKL 265 >gi|229012980|ref|ZP_04170145.1| Zn-dependent hydrolase [Bacillus mycoides DSM 2048] gi|228748234|gb|EEL98094.1| Zn-dependent hydrolase [Bacillus mycoides DSM 2048] Length = 556 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229061400|ref|ZP_04198745.1| Zn-dependent hydrolase [Bacillus cereus AH603] gi|228717823|gb|EEL69471.1| Zn-dependent hydrolase [Bacillus cereus AH603] Length = 556 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|229134604|ref|ZP_04263414.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST196] gi|229168536|ref|ZP_04296259.1| Zn-dependent hydrolase [Bacillus cereus AH621] gi|228614942|gb|EEK72044.1| Zn-dependent hydrolase [Bacillus cereus AH621] gi|228648865|gb|EEL04890.1| Zn-dependent hydrolase [Bacillus cereus BDRD-ST196] Length = 556 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|212694508|ref|ZP_03302636.1| hypothetical protein BACDOR_04036 [Bacteroides dorei DSM 17855] gi|237711156|ref|ZP_04541637.1| ribonuclease Z [Bacteroides sp. 9_1_42FAA] gi|237727520|ref|ZP_04558001.1| ribonuclease Z [Bacteroides sp. D4] gi|254883250|ref|ZP_05255960.1| ribonuclease Z [Bacteroides sp. 4_3_47FAA] gi|265750745|ref|ZP_06086808.1| ribonuclease Z [Bacteroides sp. 3_1_33FAA] gi|319642625|ref|ZP_07997271.1| ribonuclease Z [Bacteroides sp. 3_1_40A] gi|212663009|gb|EEB23583.1| hypothetical protein BACDOR_04036 [Bacteroides dorei DSM 17855] gi|229434376|gb|EEO44453.1| ribonuclease Z [Bacteroides dorei 5_1_36/D4] gi|229455000|gb|EEO60721.1| ribonuclease Z [Bacteroides sp. 9_1_42FAA] gi|254836043|gb|EET16352.1| ribonuclease Z [Bacteroides sp. 4_3_47FAA] gi|263237641|gb|EEZ23091.1| ribonuclease Z [Bacteroides sp. 3_1_33FAA] gi|317385713|gb|EFV66646.1| ribonuclease Z [Bacteroides sp. 3_1_40A] Length = 309 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 87/295 (29%), Gaps = 77/295 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P R +S ++ ++D G MQ+ + ++ ++ + +H H Sbjct: 11 CGSALPTTRHFATSQVVNI-----REKLFMIDCGEGAQMQLRKSKLKFTRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F R +Y + + L + K + + Sbjct: 66 GDHCFGLMGLISTFGMLGRTATLYIHCHAELERLLTPQLDFFCKGMSYKVV-----FQTF 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------------------------- 178 + I IE IP+ RI + GF F Sbjct: 121 DPGKAEIIYDDRSLTIETIPLRH---RIPTCGFLFSEKQTPAHIRRDMIDFYEIPVYELN 177 Query: 179 ------------GNVA----------------YCTDVNAFPAESLEKLQNLDFLIIDALK 210 G + YC+D P +E++ +D L +A Sbjct: 178 RIKNGADYTLPDGKIVPNNKLTIPSALPRRYAYCSDTIYLP-RIIEQIYGVDLLFHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H + S++ + K ++ H + + +L S + P Sbjct: 237 AQSEQARAKETFHTTASQAGEIARTAKVKQLLIGHFSARYEDESILLQEASDIFP 291 >gi|195398801|ref|XP_002058009.1| GJ15728 [Drosophila virilis] gi|194150433|gb|EDW66117.1| GJ15728 [Drosophila virilis] Length = 292 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +++DTG + Q VLR++ SI ++ TH H DH+ G+ + G Sbjct: 38 GKKRILIDTGDENVPQYIEHLNGVLRQEQASISTIILTHWHHDHVGGVKDIVG 90 >gi|163941484|ref|YP_001646368.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163863681|gb|ABY44740.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 556 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 40/124 (32%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH H DHI GI ++ +K I VYA + + E Sbjct: 60 LVENQERVKGLFITHGHEDHIGGI-----VYVLRKLSIPVYATKLTVGLIQEK------- 107 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + V+ I++N H S+G F G V Y Sbjct: 108 LGEAGMLGRVDLKTIDSNS-----TVEFNSTNVSFFGTTHSIPDSVGVCFHTSKGAVVYT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|124028414|ref|YP_001013734.1| exonuclease [Hyperthermus butylicus DSM 5456] gi|123979108|gb|ABM81389.1| predicted exonuclease [Hyperthermus butylicus DSM 5456] Length = 643 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 18/85 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF---------YMQVLREQVLSIDAVLYTHPHADHI 89 RS++ I S + +++D G + + + + + +DAV+ TH H DHI Sbjct: 192 RSAILIET-----SESKILLDVGINPSGIGYNLYPRLDIDQLNLEELDAVVVTHAHLDHI 246 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDC 114 L Y K VYA Sbjct: 247 G----LVPYLFKYGYRGPVYATKPT 267 >gi|158522595|ref|YP_001530465.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158511421|gb|ABW68388.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 549 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 23/139 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +RE+ + AV+ TH H DHI I +L + + ++ P + + Sbjct: 53 IREKGKNFAAVVLTHGHEDHIGAIP-----YLLRDMNVPIFGTPFTLGLVRHK------- 100 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L++ I ++ G E + H + +G G V + Sbjct: 101 LEEAGLLANARLHTISLDEF-----LRIGPFELDFMRVNHSVVDGVGMAIKTPVGTVVHS 155 Query: 185 TDVNAFPAESLEKLQNLDF 203 D + + N D Sbjct: 156 GDFK-LSQSAFPWM-NTDV 172 >gi|94989230|ref|YP_597331.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94993118|ref|YP_601217.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] gi|94542738|gb|ABF32787.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS9429] gi|94546626|gb|ABF36673.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS2096] Length = 560 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + + Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLWREA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + ++ + I + H G+I G F+F Sbjct: 120 TVYE-INHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFD 170 >gi|27378101|ref|NP_769630.1| hypothetical protein bll2990 [Bradyrhizobium japonicum USDA 110] gi|27351247|dbj|BAC48255.1| bll2990 [Bradyrhizobium japonicum USDA 110] Length = 329 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 68/217 (31%), Gaps = 51/217 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGL 95 S + ++ DTG + F V + V ++D V+ +H HADH+ G+ + Sbjct: 53 SALVEVAG-----KRILFDTGDNAEIFEKNVKAKGVDLTTLDFVVLSHRHADHMAGLSHV 107 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR-----TYPPIVNPIVIENND--V 148 K I +YA + S F DD Y P ++E Sbjct: 108 LSVNPK----ITIYAPKEGFGIYGSSLPSTFYRKDDSLPEEMRYYSGKPPKIMEFGTAWP 163 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD---VNAFPAESLEKLQNLD--F 203 + E +P +A +D SL D Sbjct: 164 TANFQLIDQTTEIMPG-------------ITLIALISDLPGTKELKELSLAV-NTPDGVV 209 Query: 204 LIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 L++ SH + ++ +INPK H+ Sbjct: 210 LVVGC-------SHPGIERIVEAATVINPK----IHL 235 >gi|15675695|ref|NP_269869.1| Zn-dependent hydrolase [Streptococcus pyogenes M1 GAS] gi|19746803|ref|NP_607939.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS8232] gi|50914952|ref|YP_060924.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|56808615|ref|ZP_00366343.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pyogenes M49 591] gi|71911408|ref|YP_282958.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94991175|ref|YP_599275.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94995049|ref|YP_603147.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|209560032|ref|YP_002286504.1| hypothetical protein Spy49_1549 [Streptococcus pyogenes NZ131] gi|306826674|ref|ZP_07459977.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] gi|13622911|gb|AAK34590.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS] gi|19749038|gb|AAL98438.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232] gi|50904026|gb|AAT87741.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10394] gi|71854190|gb|AAZ52213.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS5005] gi|94544683|gb|ABF34731.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10270] gi|94548557|gb|ABF38603.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS10750] gi|209541233|gb|ACI61809.1| hypothetical protein Spy49_1549 [Streptococcus pyogenes NZ131] gi|304431122|gb|EFM34128.1| metallo-beta-lactamase superfamily protein [Streptococcus pyogenes ATCC 10782] Length = 560 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + + Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLWREA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + ++ + I + H G+I G F+F Sbjct: 120 TVYE-INHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFD 170 >gi|282852090|ref|ZP_06261448.1| ribonuclease Z [Lactobacillus gasseri 224-1] gi|282556850|gb|EFB62454.1| ribonuclease Z [Lactobacillus gasseri 224-1] Length = 309 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R + N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSCTAL---KLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + +YP + +V++ + + H R+ S GFR Sbjct: 102 TSLK---VSRTRVSYP--IKYVVLKEDGLIFENNL----FAVYTARLDH-RVPSFGFRV 150 >gi|270296450|ref|ZP_06202650.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273854|gb|EFA19716.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 205 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 26/147 (17%) Query: 50 RGSNTTVIVDTGPDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 R + ++D G + + + + L + + TH H DHI+G+D + + + + Sbjct: 22 RNCDLCFLIDCGDPAPIIENINNRGLPLKGIFITHSHFDHIYGLDSIIDEYPET----PI 77 Query: 109 YAAPDCMKHLFES---------FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 Y + + L+ Y F+ ++ D SAG + Sbjct: 78 YISALGKEGLYSDKLNLSRYSLCPYVFQHYSVMK--------ELKEGDTVYLYGSAGVEV 129 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTD 186 P H R S L ++FGN + D Sbjct: 130 YETP---GHDR-SCLTYKFGNCLFTGD 152 >gi|229829536|ref|ZP_04455605.1| hypothetical protein GCWU000342_01632 [Shuttleworthia satelles DSM 14600] gi|229791525|gb|EEP27639.1| hypothetical protein GCWU000342_01632 [Shuttleworthia satelles DSM 14600] Length = 303 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 67/204 (32%), Gaps = 46/204 (22%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG G ++ +P RR ++ + R + ++++D G + + Sbjct: 6 LLGTGGTMPLP----------------RR-----WLTALVTRFNGHSLLIDCGEGTQIAM 44 Query: 69 LREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + ID + +TH HADHI G+ GL R P + R Sbjct: 45 KEAGISPNPIDVICFTHFHADHISGLPGLLLSMGNADR-----TDPVTLIGPRGLVRVVT 99 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-----RFGNV 181 P ++E D G I+A H ++ G+ R G Sbjct: 100 ALRSIAQELPF-EVRMVEIEDRTQEFDLFGYRIQA--FRVNH-NVTCYGYSLSIPRAGRF 155 Query: 182 AYCTDVN-----AFPAESLEKLQN 200 D + P ++ +LQ Sbjct: 156 ----DADAARRQEIPLKAWNRLQK 175 >gi|229189800|ref|ZP_04316812.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] gi|228593664|gb|EEK51471.1| Zn-dependent hydrolase [Bacillus cereus ATCC 10876] Length = 557 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+E I ++ TH H DHI GI YFLKQ + +YA + + Sbjct: 59 LQENKDKIRGLIVTHGHEDHIGGI----PYFLKQLN-VPIYATKLTLGLIS-------IE 106 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + IVI++ + G I H LG F G V + Sbjct: 107 LKEHKLQDSTQLIVIDSESL-----IEFGKINLSFFKTNHSIPDCLGIAFHTPEGTVVHT 161 Query: 185 TDVN 188 D Sbjct: 162 GDFK 165 >gi|169338120|ref|ZP_02622739.2| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] gi|169294069|gb|EDS76202.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum C str. Eklund] Length = 164 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 14/79 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I+ N ++++D G + ++ + + +D V+ THPH DHI G+D + Sbjct: 62 SILITE-----KNHSMLIDAGNNADGTMVVDYLKKMGIKKLDYVVGTHPHEDHIGGLDNV 116 Query: 96 RGYFLKQKRPIDVYAAPDC 114 F K +Y Sbjct: 117 INAFNIGK----IYMPSKT 131 >gi|261327437|emb|CBH10412.1| cleavage and polyadenylation specificity factor subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 770 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 27/185 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + +V++D G L + ID VL TH H DH Sbjct: 52 RSCVVVRYKG-----RSVMLDCGNHPAKSGLDSLPFFDSIRCDEIDLVLITHFHLDHCGA 106 Query: 92 IDGLRGYFLKQKRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + + + ++ K + F + +D + + + V Sbjct: 107 LP---YFCEQTSFRGRIFMTSATKAFYKMVMNDFLRIGASAEDIVNNEWLQSTIEKIETV 163 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQ----N 200 + I P H + + F + Y D + P L + + Sbjct: 164 EYHEEVTVNGIHFQPFNAGH-VLGAALFMVDIAGMKLLYTGDFSRVPDRHLLGAEVPPYS 222 Query: 201 LDFLI 205 D LI Sbjct: 223 PDILI 227 >gi|167767370|ref|ZP_02439423.1| hypothetical protein CLOSS21_01889 [Clostridium sp. SS2/1] gi|167711345|gb|EDS21924.1| hypothetical protein CLOSS21_01889 [Clostridium sp. SS2/1] Length = 603 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 29/114 (25%) Query: 32 NPKNRRTRSSLKISRVSERGS----------NTTVIV-DTGPDFYMQ------------- 67 P RR SS+KI + G N +++ D G F + Sbjct: 48 RPMPRRKPSSVKIIPLGGLGQIGMNITAFECNNQILIVDCGLAFPDEDMLGIDLVIPDIT 107 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 L++ I ++ TH H DHI I + +++ + +YA M + Sbjct: 108 YLKDNASKIRGLVITHGHEDHIGAIP-----YFEKELNVPIYATKLTMALIENK 156 >gi|167628234|ref|YP_001678733.1| metallo beta-lactamase domain protein [Heliobacterium modesticaldum Ice1] gi|167590974|gb|ABZ82722.1| metallo beta-lactamase domain protein [Heliobacterium modesticaldum Ice1] Length = 298 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 17/99 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGP-DFYMQVL----REQVLSIDAVLYTHPHADHIHGIDG- 94 S+ I + + V+VD G D QV+ R+ V + A++ THPH DHI G+D Sbjct: 60 SILI----QSPAGRFVLVDGGNIDDGQQVVDYLKRQGVKELAAIVATHPHEDHIGGLDKV 115 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 LR + + Q VY ++F Y A+ Sbjct: 116 LRSFPVGQ-----VYMPK--ATTTTKTFAYFLNAVKSSG 147 >gi|167464752|ref|ZP_02329841.1| hypothetical protein Plarl_19712 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382331|ref|ZP_08056238.1| ribonuclease J1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153684|gb|EFX46059.1| ribonuclease J1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 558 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V++D+G F + L E + +L TH H DHI G+ Y Sbjct: 30 DNDIVVIDSGLKFPEEDMLGIDIVIPDISYLLENKDKVRGILITHGHEDHIGGL----PY 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK + VY + + + + + ++ N D I M G Sbjct: 86 VLKHLN-VPVYGTKLTLGLIETKLKEAGLLGETK--------RILINADSEIKM----GT 132 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + A H S+G GNV + D Sbjct: 133 MTATFFKTNHSIPDSVGVCLETPEGNVVHTGDFK 166 >gi|331266841|ref|YP_004326471.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] gi|326683513|emb|CBZ01131.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis Uo5] Length = 553 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ + + G E H SLG G++ Y Sbjct: 105 GND-AVKKFNDFHVIDED-----TEIDFGGTEVSFFRTTHSIPESLGVVLKTAKGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|306829079|ref|ZP_07462269.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] gi|304428165|gb|EFM31255.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis ATCC 6249] Length = 553 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ + + G E H SLG G++ Y Sbjct: 105 GND-AVKKFNDFHVIDED-----TEIDFGGTEVSFFRTTHSIPESLGVVLKTPKGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|260549327|ref|ZP_05823547.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp. RUH2624] gi|260407733|gb|EEX01206.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp. RUH2624] Length = 810 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 69/202 (34%), Gaps = 38/202 (18%) Query: 53 NTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++DTG P Q V +D V+ +H DH Sbjct: 568 EQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQ----GVKRLDRVVLSHLDQDHSGAFP--- 620 Query: 97 GYFLKQKRPI-DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F++Q+ P+ V + L + F+YC + P ++ ++ + + + Sbjct: 621 --FIQQEIPVKQVLSNEQSSTTLKQPFQYCHQGQQ--WQYPELDIQILWPKEKDLAFVHS 676 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 + ++ H + S + N D E L++ L +D L G H Sbjct: 677 QQN-QYSCVVYLHFKGISD---YQNFLIMGDAGW--EAEYELLEDYPSLKVDVLVLGHHG 730 Query: 216 S-HFSLSESLKKIELINPKNAI 236 S H S + + + PK AI Sbjct: 731 SKHSS---AYDFLATLKPKLAI 749 >gi|315634014|ref|ZP_07889303.1| hydroxyacylglutathione hydrolase [Aggregatibacter segnis ATCC 33393] gi|315477264|gb|EFU68007.1| hydroxyacylglutathione hydrolase [Aggregatibacter segnis ATCC 33393] Length = 233 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D +L EQ LS+DA+L TH HADH +G+ F ++ + +Y +C Sbjct: 24 LIVDLPETDKLFHLLEEQHLSVDALLLTHNHADHTNGV----AAFKQRFPQVPIYGPAEC 79 Query: 115 MK 116 Sbjct: 80 AA 81 >gi|296420324|ref|XP_002839725.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635919|emb|CAZ83916.1| unnamed protein product [Tuber melanosporum] Length = 896 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 92/297 (30%), Gaps = 64/297 (21%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G++L P R S+ + ++++D G + Sbjct: 548 EVITLGTGSAL----------------PSKYRNVSATLVKVPGA----GSILLDAGENTL 587 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK---------QKRPIDV 108 Q+ L+ + + A+ +H HADH G + + I++ Sbjct: 588 GQLRRLYGPTELKTALRDLKALYISHLHADHHLGTVAVLKARYNEVYSSDMCEANQLINI 647 Query: 109 YAAPDCMKHLFE-------SFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 A + L E F F + +D +P I + + + S Sbjct: 648 VAPCKFLVWLREYADVEEFGFSKIRFISCEDLLKKNQGSPRNIAAHLLTEVLDSLSMASI 707 Query: 161 AIPILQQ------HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 I GF+ AY D +E QN L+ +A Sbjct: 708 QISRAVHCLDSFTTSWTWKNGFKI---AYSGDTRP-TEGFVEIGQNSIVLLHEATFDDEL 763 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVD---LDYDMVLKSTPSRVVPAFD 262 L + H + SE++ + + KN ILTH L + V+ AFD Sbjct: 764 LPEAIAKKHSTTSEAINAGKEMGAKNIILTHFSQRYPKLPILSAAEEGGPEVLVAFD 820 >gi|325679355|ref|ZP_08158940.1| hypothetical protein CUS_6783 [Ruminococcus albus 8] gi|324108952|gb|EGC03183.1| hypothetical protein CUS_6783 [Ruminococcus albus 8] Length = 612 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 17/82 (20%) Query: 50 RGSNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLR 96 SN I+D G F ++L + + + V+ TH H DHI G+ Sbjct: 82 ECSNDMFIIDCGLAFPDSEMLGVDIVIPDFTYVEKNLEKLRGVVITHGHEDHIGGL---- 137 Query: 97 GYFLKQKRPIDVYAAPDCMKHL 118 YFLK+ + VY + + Sbjct: 138 PYFLKKFPSVPVYGTRLTIGLI 159 >gi|255007846|ref|ZP_05279972.1| ribonuclease Z [Bacteroides fragilis 3_1_12] gi|313145552|ref|ZP_07807745.1| tRNA 3 endonuclease [Bacteroides fragilis 3_1_12] gi|313134319|gb|EFR51679.1| tRNA 3 endonuclease [Bacteroides fragilis 3_1_12] Length = 304 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 33/184 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----RDKLFMIDCGE 40 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R + ++ + +H H DH G+ GL F R + +++ + L Sbjct: 41 GAQMQLRKSRLKFSRLNHIFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L + V + + + + IP+ RI GF F Sbjct: 101 APMLNFFCHTLAYK-----VIFHEFDTRQASVIYEDRSMTVTTIPLQH---RIPCCGFLF 152 Query: 179 GNVA 182 A Sbjct: 153 AEKA 156 >gi|238759157|ref|ZP_04620325.1| Hydroxyacylglutathione hydrolase [Yersinia aldovae ATCC 35236] gi|238702573|gb|EEP95122.1| Hydroxyacylglutathione hydrolase [Yersinia aldovae ATCC 35236] Length = 251 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 VIVD G + L + A+L TH H DH+ G+ L + I V Sbjct: 19 DSQKQCVIVDPGESAPVLAALSQDQYLPQAILLTHHHNDHVGGVADL----CRHFPNIPV 74 Query: 109 YAAPDCMK 116 Y + Sbjct: 75 YGPQETAD 82 >gi|237721415|ref|ZP_04551896.1| ribonuclease Z [Bacteroides sp. 2_2_4] gi|229449211|gb|EEO55002.1| ribonuclease Z [Bacteroides sp. 2_2_4] Length = 312 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPRGLEELF 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + + E + + + IP+ RI GF F Sbjct: 101 APMLAFFCKTLTYKVF-----FHEFETKEPMLIYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|261340922|ref|ZP_05968780.1| hydroxyacylglutathione hydrolase [Enterobacter cancerogenus ATCC 35316] gi|288316779|gb|EFC55717.1| hydroxyacylglutathione hydrolase [Enterobacter cancerogenus ATCC 35316] Length = 252 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +IVD G +Q + + +A+L TH H DH+ G+ L Q + V Sbjct: 19 DDARRCIIVDPGEAAPILQAINDNNWQPEAILLTHHHNDHVGGVPALLA----QFPDLAV 74 Query: 109 YAAPDCMK 116 Y + Sbjct: 75 YGPAETRD 82 >gi|206901248|ref|YP_002250030.1| metal-dependent hydrolases of the beta-lactamase superfamily II [Dictyoglomus thermophilum H-6-12] gi|206740351|gb|ACI19409.1| metal-dependent hydrolases of the beta-lactamase superfamily II [Dictyoglomus thermophilum H-6-12] Length = 258 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 18/104 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGI---- 92 S+ I R E ++ DTG ++L + + ++ ++ +H H DH G+ Sbjct: 28 SVLIERRGEE----ALLFDTGGSDVFIKNAKILGKDLTKVENIVISHGHYDHAGGLKYLA 83 Query: 93 --DGLRGYFLKQKRPIDVY-AAPDC---MKHLFESFRYCFKALD 130 D +L+++ + Y + + F + F D Sbjct: 84 KFDKKYKVYLRREALLPKYSGDRFTGIDWDSIKKDFDFIFVEKD 127 >gi|134301640|ref|YP_001121608.1| beta-lactamase superfamily hydrolase [Francisella tularensis subsp. tularensis WY96-3418] gi|134049417|gb|ABO46488.1| Metal-dependent hydrolase, beta-lactamase superfamily III [Francisella tularensis subsp. tularensis WY96-3418] Length = 320 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 61 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENLP 120 Query: 108 VYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPICM 152 +F Y L +P ++P++ I+ + Sbjct: 121 FSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTK 180 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L ++ G + + + F ++ +N D Sbjct: 181 VFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 240 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 241 LMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|282861831|ref|ZP_06270895.1| ComEC/Rec2-related protein [Streptomyces sp. ACTE] gi|282563647|gb|EFB69185.1| ComEC/Rec2-related protein [Streptomyces sp. ACTE] Length = 872 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VDTGPD + LR+ + + VL TH HADH+ G+ Sbjct: 636 GKGTGVVVDTGPDPRPVDRCLRDLGITRVPLVLLTHFHADHVRGL 680 >gi|167957347|ref|ZP_02544421.1| predicted hydrolase [candidate division TM7 single-cell isolate TM7c] Length = 412 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 14/101 (13%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E+ I V++TH H DHI L + P VYA+ + L + Sbjct: 148 LLERKHMIRGVVFTHGHLDHIGAFRHLIP-----QIPAPVYASKFTIGMLKRTM-----E 197 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 D Y P + E ++ G + H Sbjct: 198 ESDSGYKPDYYELNPEAHE----RAQIGDSFNIELVRVNHS 234 >gi|73540872|ref|YP_295392.1| ribonuclease Z [Ralstonia eutropha JMP134] gi|72118285|gb|AAZ60548.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 366 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 L + + ER ++ D G D + + RE ++ + V TH H DH G D L Sbjct: 33 PGLLVDFLDER---RALLFDLG-DISVLMPRE-LMRLSQVFVTHAHMDHFSGFDHLLRVL 87 Query: 100 LKQKRPIDVYAAPDCMKHLFESFR 123 L +K I +Y P + + Sbjct: 88 LGRKDRIVLYGGPGFLAQIEHKLH 111 >gi|56707894|ref|YP_169790.1| arylsulfatase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670365|ref|YP_666922.1| arylsulfatase [Francisella tularensis subsp. tularensis FSC198] gi|224456975|ref|ZP_03665448.1| arylsulfatase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370385|ref|ZP_04986390.1| arylsulfatase [Francisella tularensis subsp. tularensis FSC033] gi|254874705|ref|ZP_05247415.1| arylsulfatase [Francisella tularensis subsp. tularensis MA00-2987] gi|56604386|emb|CAG45416.1| Arylsulfatase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320698|emb|CAL08799.1| Arylsulfatase [Francisella tularensis subsp. tularensis FSC198] gi|151568628|gb|EDN34282.1| arylsulfatase [Francisella tularensis subsp. tularensis FSC033] gi|254840704|gb|EET19140.1| arylsulfatase [Francisella tularensis subsp. tularensis MA00-2987] gi|282159079|gb|ADA78470.1| Arylsulfatase [Francisella tularensis subsp. tularensis NE061598] Length = 320 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 61 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENLP 120 Query: 108 VYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPICM 152 +F Y L +P ++P++ I+ + Sbjct: 121 FSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTK 180 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L ++ G + + + F ++ +N D Sbjct: 181 VFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 240 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 241 LMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|297197107|ref|ZP_06914504.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] gi|297146591|gb|EFH28226.1| beta-lactamase domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 655 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 26/188 (13%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC--- 125 +R+++ I AV+ TH H DHI G+ Y L+++ I V + + L + Sbjct: 70 IRDRLDDIVAVVLTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFLEAKLKEHGIR 125 Query: 126 -----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + D R + P V N+ +P + A ++ G F + Sbjct: 126 PRTVRVREGDRRGFGPFDLEFVAVNHSIPDSLAVAIR--TGAGMVLHTGDFKMDQFPLDD 183 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK---NGLHSSHFSLSESLKKIELINPKNAIL 237 TD+ AF E +D + D+ G +S L+ +++++ P+ I+ Sbjct: 184 R--ITDLRAFARLGEE---GVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRTAPRRVIV 238 Query: 238 ----THMH 241 +H+H Sbjct: 239 SSFASHVH 246 >gi|255019108|ref|ZP_05291234.1| hypothetical protein LmonF_17636 [Listeria monocytogenes FSL F2-515] Length = 128 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L V ID +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANVKKIDLLLLTHPHADHIGNADKVIA 107 >gi|220920322|ref|YP_002495623.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219944928|gb|ACL55320.1| beta-lactamase domain-containing protein [Methylobacterium nodulans ORS 2060] Length = 308 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 39/222 (17%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQ---VLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V R ++D G ID +L++H H DH+ G+ L+ L + Sbjct: 55 CVEIRCGERLFVIDAGTGLNALGAHHGADLPQRID-LLFSHLHLDHVTGLAFLKPAVLDK 113 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA------- 155 R I Y + E +R + P + PI ++ Sbjct: 114 NREIHTYCGNLDGQSAEE--------PLNRLFSPPLFPITLDALPARFVHHGFRAGETLT 165 Query: 156 ---GGVIEAIPILQQHGRISSLGFRF---GNVA-YCTDVNAF---PAES-LEKLQNLDFL 204 G ++ +P+ G + G+RF G A Y +D+ P + L ++ D + Sbjct: 166 FPDGMEVDTLPLQHPQG---ATGYRFRHAGRTACYISDIEHSEPWPERNLLHFVEGADLI 222 Query: 205 IIDA-LKNGLHSS-----HFSLSESLKKIELINPKNAILTHM 240 + D G + S H + + ++ + H+ Sbjct: 223 LYDGMFTEGEYPSCRGWGHSTWEKGVELCRAAKVGRLGIIHL 264 >gi|183602113|ref|ZP_02963481.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp. lactis HN019] gi|219683025|ref|YP_002469408.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis AD011] gi|241191345|ref|YP_002968739.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196751|ref|YP_002970306.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218606|gb|EDT89249.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp. lactis HN019] gi|219620675|gb|ACL28832.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis AD011] gi|240249737|gb|ACS46677.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251305|gb|ACS48244.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794338|gb|ADG33873.1| hypothetical protein BalV_1285 [Bifidobacterium animalis subsp. lactis V9] Length = 635 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ +DA++ TH H DHI G+ Y L Sbjct: 105 LLIDCGVLFPEEEQPGVDLILPDF--NYIKDRLDKVDALVLTHGHEDHIGGV----PYLL 158 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + F R + +E D K G Sbjct: 159 KMRPDIPLIGSKLTLG---------FVEAKCREHRIEPVMTQVEGRD-----KLKVGPFN 204 Query: 161 AIPILQQHGRISSLGFRFGNVAY-CTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L A D + L KL Q +D L+ Sbjct: 205 LEFVSVTHSIPDALAVCVRTPAGSLIDTGDIKLDQLPLDHRVTDLVEFGKLGEQGIDLLM 264 Query: 206 ID 207 +D Sbjct: 265 MD 266 >gi|163783481|ref|ZP_02178472.1| metal dependent phosphohydrolase [Hydrogenivirga sp. 128-5-R1-1] gi|159881245|gb|EDP74758.1| metal dependent phosphohydrolase [Hydrogenivirga sp. 128-5-R1-1] Length = 254 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPIDVYAAPDC 114 +++D G L + L I+ +L TH H DHI I + Y + +++P+++Y + Sbjct: 27 ILIDAGNIMK--ALGGECLQINNILLTHAHLDHIVDIPFMIDYTFRFREQPLNIYGHRET 84 Query: 115 MKHLFE 120 ++ + + Sbjct: 85 IEAVKD 90 >gi|71904249|ref|YP_281052.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] gi|71803344|gb|AAX72697.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS6180] Length = 560 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + + Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLWREA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + ++ + I + H G+I G F+F Sbjct: 120 TVYE-INHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFD 170 >gi|21911156|ref|NP_665424.1| Zn-dependent hydrolase [Streptococcus pyogenes MGAS315] gi|28895159|ref|NP_801509.1| Zn-dependent hydrolase [Streptococcus pyogenes SSI-1] gi|21905367|gb|AAM80227.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810404|dbj|BAC63342.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 560 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + + Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLWREA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + ++ + I + H G+I G F+F Sbjct: 120 TVYE-INHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFD 170 >gi|296875692|ref|ZP_06899757.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] gi|296433262|gb|EFH19044.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 15912] Length = 553 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGTELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ N + G H S+G GN+ Y Sbjct: 105 GNDS-VKKFNDFHVIDQNS-----EIDFGDAVVSFFQTTHSIPESIGIVIGTSEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|192362517|ref|YP_001982517.1| hydroxyacylglutathione hydrolase [Cellvibrio japonicus Ueda107] gi|190688682|gb|ACE86360.1| hydroxyacylglutathione hydrolase [Cellvibrio japonicus Ueda107] Length = 211 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +DA+L TH H DHI GID L+ + VY Sbjct: 8 LDAILVTHHHRDHIGGIDDLQ---HHYGNQLPVYGP 40 >gi|116333993|ref|YP_795520.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis ATCC 367] gi|116099340|gb|ABJ64489.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Lactobacillus brevis ATCC 367] Length = 610 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE I AV TH HAD I + YFL + + V+ + + Sbjct: 56 LRENKDRIVAVFLTHGHADAIGAL----PYFLSEFN-VPVFGSEMTIALAK------INV 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 D+ + VI+ + G + H SLG G + Y Sbjct: 105 ADEPKIKKFDDFHVIDEK-----TEIDFGDVVVSFFSTTHSIPESLGIDLKTDEGQIIYT 159 Query: 185 TDVN 188 D Sbjct: 160 GDFK 163 >gi|312866119|ref|ZP_07726340.1| ribonuclease J 2 [Streptococcus downei F0415] gi|311098523|gb|EFQ56746.1| ribonuclease J 2 [Streptococcus downei F0415] Length = 553 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 12/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + V TH HAD I + +L Q + V+ + ++ Sbjct: 55 LIENRDRVQGVFLTHGHADAIGALP-----YLLQDVRVPVFGSELTIELAK------LVV 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 ++ N V++ I K A + LG GN+ Y D Sbjct: 104 KNNSQVKKFNNFHVVDA-QTEIEFKDAVVSFFSTTHSIPESLGIVLGTDQGNIVYTGDFK 162 >gi|258515302|ref|YP_003191524.1| beta-lactamase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779007|gb|ACV62901.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 294 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 17/64 (26%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---------FYMQVLREQVLSIDAVLYTHPHADHIHG 91 S+ + ++VD G + Q V ID ++ THPH DHI G Sbjct: 59 SILLQIPG----GQNILVDAGNNEDGPLVVEYLREQ----GVQKIDYLVATHPHEDHIGG 110 Query: 92 IDGL 95 +D + Sbjct: 111 MDNV 114 >gi|226314633|ref|YP_002774529.1| hypothetical protein BBR47_50480 [Brevibacillus brevis NBRC 100599] gi|226097583|dbj|BAH46025.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 222 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 15/137 (10%) Query: 51 GSNTTVIVDTG-----PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +V++DTG D + + + V + AV+ TH DHI + + Sbjct: 26 DQDMSVLIDTGFPGQMEDLRVAMEKTGVPLDKLKAVILTHQDVDHIGSLPEILQEC---G 82 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-----MKSAGGV 158 + VY+ ++ + V+ V + ++P C + + G Sbjct: 83 DQVHVYSHELDKPYIQGEIPLLKDGHVENPPKGRVDHTVSDGQELPFCGGIRVIHTPGHT 142 Query: 159 IEAIPILQQHGRISSLG 175 + I + + +I G Sbjct: 143 LGHISLYLKQSKILIAG 159 >gi|322375108|ref|ZP_08049622.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] gi|321280608|gb|EFX57647.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] Length = 559 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A+L TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAILITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|307710237|ref|ZP_07646680.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307618999|gb|EFN98132.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 559 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A+L TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAILITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|282856628|ref|ZP_06265897.1| metallo-beta-lactamase family protein [Pyramidobacter piscolens W5455] gi|282585538|gb|EFB90837.1| metallo-beta-lactamase family protein [Pyramidobacter piscolens W5455] Length = 361 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 22/124 (17%) Query: 41 SLKISRVSERGSNTTVIVDTG-------PDFYMQ----VLREQVLSIDAVLYTHPHADHI 89 S I G V++DTG F + +LR ID ++ +H H DH Sbjct: 106 SALIEFEFMNGDRKKVLLDTGWNNKWMTKRFEEEGIDAMLRSG--EIDTLIISHDHYDHY 163 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 GI + K I +Y K Y + D PPI N + + Sbjct: 164 WGIQTTLQW----KPDITLYIPDSFRKE-----SYQLLSGADFPKPPISNTVPFKGELKK 214 Query: 150 ICMK 153 +K Sbjct: 215 FALK 218 >gi|218129767|ref|ZP_03458571.1| hypothetical protein BACEGG_01346 [Bacteroides eggerthii DSM 20697] gi|317475885|ref|ZP_07935142.1| ribonuclease Z [Bacteroides eggerthii 1_2_48FAA] gi|217987877|gb|EEC54202.1| hypothetical protein BACEGG_01346 [Bacteroides eggerthii DSM 20697] gi|316908045|gb|EFV29742.1| ribonuclease Z [Bacteroides eggerthii 1_2_48FAA] Length = 304 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 95/320 (29%), Gaps = 93/320 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILG G++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGSGSAL----------------PTTRHFPTSQVVNL-----RDKLFMIDCGE 40 Query: 63 DFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL 118 +Q R + ++ + +H H DH G+ GL L + + ++ +P ++ L Sbjct: 41 GAQLQFRKSRLKFSRLNRIFISHLHGDHCFGLPGLISTLNLLGRTADLHIH-SPKGLEEL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 F + E + + + + IP+ R+ GF Sbjct: 100 LTPMLAFFNHQMTYK----IFFHAFETKEAALIYEDRSLTVTTIPLRH---RMPCCGFLF 152 Query: 177 -------------------------RFGNVA-YCT------------------------- 185 R N A Y T Sbjct: 153 AEKPRPNHILRDMIDFYQVPVYELNRIKNGADYVTPEGEVIPNARLTRPSAAPRRYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLI------IDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D P+ + E+++ +D L DA + H + S++ + K ++ H Sbjct: 213 DTIYLPSIT-EQIKGVDLLFHEATFAEDAAPRAKETFHTTASQAAQIARDAEVKKLLIGH 271 Query: 240 MHVDLDYDMVLKSTPSRVVP 259 D + VL V P Sbjct: 272 FSARYDDEQVLLEEARPVFP 291 >gi|328544297|ref|YP_004304406.1| Metal dependent beta lactamase protein [Polymorphum gilvum SL003B-26A1] gi|326414039|gb|ADZ71102.1| Metal dependent beta lactamase protein [Polymorphum gilvum SL003B-26A1] Length = 274 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 84/258 (32%), Gaps = 52/258 (20%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + R + V+VD G +++ E + D +L+TH H DHI G+ + ++ Sbjct: 31 TCLEIRAGDALVLVDCGSGARNLGGRLVEEGPRAFD-LLFTHTHLDHICGMPFFKPAYVP 89 Query: 102 QKRPIDVYA-----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 ID +A + + + PPI V AG Sbjct: 90 GFG-IDAWAGHFQDRTELVDIICRIMS-----------PPIFPVAATTLKAVSFRKFQAG 137 Query: 157 GVI------EAIPILQQHGRISSLGFRFG----NVAYCTDVNA----FPAESLEKLQNLD 202 V+ + H + G+RF ++ TD A + D Sbjct: 138 DVVPRNDGLVIRTVRLNHPG-GACGYRFDHAGKSICIITDHEHGDPAIDAAVRAFVVGAD 196 Query: 203 FLIIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVDL-----DYDMVLK 251 +I DA+ + H + + ++ + +L H D D D + + Sbjct: 197 VMIYDAMFTDAEYETYRGWGHSTWQKGVELALAAGVRTPVL--FHHDPRRTDDDLDAIGR 254 Query: 252 S---TPSRVVPAFDGMQF 266 VV A +GM Sbjct: 255 EARLVHPGVVVAAEGMVL 272 >gi|156937204|ref|YP_001435000.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566188|gb|ABU81593.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 312 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLR-------EQVLSIDAVLYTH 83 +P ++R I G V+V+TGP +VL+ + +DAVL TH Sbjct: 24 ADPVSKREN---YIKSYLIVGPEARVLVETGPRNAFEVLKDSLESKGFSLRELDAVLLTH 80 Query: 84 PHADHIHGIDGLRGYF 99 H DH G+ + Sbjct: 81 IHLDHAGGLGEVLKEC 96 >gi|24378865|ref|NP_720820.1| hypothetical protein SMU.368c [Streptococcus mutans UA159] gi|24376744|gb|AAN58126.1|AE014884_4 conserved hypothetical protein [Streptococcus mutans UA159] Length = 560 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 V I A++ TH H DHI GI FL ++ I +YA P + + D Sbjct: 65 NVDRIKALVITHGHEDHIGGIP-----FLLKQASIPIYAGPLALALIRGKLEEHGLLRDA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I + + ++ + I + H G++ G F+F Sbjct: 120 KMYE-INHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFD 170 >gi|77463090|ref|YP_352594.1| metallo-beta-lactamase superfamily hydrolase [Rhodobacter sphaeroides 2.4.1] gi|126461962|ref|YP_001043076.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|77387508|gb|ABA78693.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Rhodobacter sphaeroides 2.4.1] gi|126103626|gb|ABN76304.1| beta-lactamase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 557 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 42/164 (25%), Gaps = 35/164 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHADH 88 + G ++VD G F L E+ I+A+ TH H DH Sbjct: 22 YVYGYGPEGRERLIVVDLGVTFPDMETTPGVDLIMADISWLEERQDRIEAIFITHAHEDH 81 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 I + L + VYA F + P ++ Sbjct: 82 IGALGHLWP-----RLKAPVYARRFTGTIGRLKF--------EEHGLPADQITIVGARPE 128 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + G E + H S G + + D Sbjct: 129 VVE----AGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFK 168 >gi|313624389|gb|EFR94408.1| putative secreted lipoprotein [Listeria innocua FSL J1-023] Length = 320 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Query: 52 SNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 TT+++DTG ++L + +D +L THPHADHI D + +P + Sbjct: 2 DGTTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNADK----VIATYKPKE 57 Query: 108 VYAAPDC 114 ++ Sbjct: 58 IWMDGLT 64 >gi|154491005|ref|ZP_02030946.1| hypothetical protein PARMER_00922 [Parabacteroides merdae ATCC 43184] gi|154088753|gb|EDN87797.1| hypothetical protein PARMER_00922 [Parabacteroides merdae ATCC 43184] Length = 272 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 79/264 (29%), Gaps = 61/264 (23%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T+LG G + V + + + ++VD G Sbjct: 6 TTELTMLGTGNAT-VTKCYNTC---------------------FTIKTGKNILLVDAGGG 43 Query: 64 --FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--------VYAA 111 Q+ + ++ I + TH H DHI G + + ++ + VY Sbjct: 44 NGILGQLEKAEIAISEIHDMFVTHAHTDHILG--AVWMVRIVMQKMLSGQYTGTFRVYGH 101 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 ++ L R A + +E +V G + + Sbjct: 102 DKVLEVLDWICRKLLPAKIV-----ALIGSAVEFREVKDGETFEAGGLCLQCFDIASTKE 156 Query: 172 SSLGFRFGNVAYCTDVNAF------PAESL--EKLQNLDFLIIDAL-------KNGLHSS 216 GFR D +F P + ++N D+L+ +A + Sbjct: 157 KQFGFRTQ----LPDGQSFVCLGDEPYNVINRSYVENADWLLCEAFCLYEDREVFQPYKK 212 Query: 217 HFSLS-ESLKKIELINPKNAILTH 239 H S + ++ + + KN +L H Sbjct: 213 HHSTALDAGRLAAELGVKNLVLYH 236 >gi|227364787|ref|ZP_03848836.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] gi|227070246|gb|EEI08620.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri MM2-3] Length = 331 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE I V TH HAD I + YFL + V+ + + + + + Sbjct: 56 LREHKDKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKNHKEV 110 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I + + + G I G F+F A Sbjct: 111 KKFNDFHVVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKK 170 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 171 GYQTDLARLAE 181 >gi|194468436|ref|ZP_03074422.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] gi|194453289|gb|EDX42187.1| beta-lactamase domain protein [Lactobacillus reuteri 100-23] Length = 593 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE I V TH HAD I + YFL + V+ + + + + + Sbjct: 56 LREHKDKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKNHKEV 110 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I + + + G I G F+F A Sbjct: 111 KKFNDFHVVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKK 170 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 171 GYQTDLARLAE 181 >gi|148543881|ref|YP_001271251.1| beta-lactamase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|184153281|ref|YP_001841622.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|325682586|ref|ZP_08162103.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] gi|60172714|gb|AAX14548.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri] gi|148530915|gb|ABQ82914.1| beta-lactamase domain protein [Lactobacillus reuteri DSM 20016] gi|183224625|dbj|BAG25142.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri JCM 1112] gi|324978425|gb|EGC15375.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri MM4-1A] Length = 593 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE I V TH HAD I + YFL + V+ + + + + + Sbjct: 56 LREHKDKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKNHKEV 110 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I + + + G I G F+F A Sbjct: 111 KKFNDFHVVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKK 170 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 171 GYQTDLARLAE 181 >gi|90961029|ref|YP_534945.1| zinc-dependent hydrolase [Lactobacillus salivarius UCC118] gi|90820223|gb|ABD98862.1| Zn-dependent hydrolase, beta-lactamase superfamily [Lactobacillus salivarius UCC118] Length = 267 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 61/249 (24%) Query: 52 SNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V+VD G + M + + +D++L TH H+DHI G+ L ++ + Sbjct: 25 PKSKVLVDAGLSGKKIEELMNSIGRTLKDVDSLLVTHEHSDHIKGVG-----VLARRYGM 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV----PICMKSAGGVI--- 159 ++YA + P+ + + + ++S G Sbjct: 80 NIYANQGTWDAMSAKIGKV----------PLEQKHIFDMGKALSIGDVDIESFGVSHDAA 129 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGL 213 E HG+ + A TD P + N + + + L+ G Sbjct: 130 EPQFYELHHGK--------SSFAIVTDTGYVPDSVAGVINNAEAYLFECNHDTEMLRMGP 181 Query: 214 HS-----------SHFSLSE-SLKKIELI--NPKNAILTHMHVD-----LDYDMVLKSTP 254 +S H S + + ++++ N K L H+ + L + V Sbjct: 182 YSWSLKQRIMSDTGHLSNDDGAAALMDVLGNNTKKIFLGHLSQENNVKALAHVTVEDIMK 241 Query: 255 SR-VVPAFD 262 + D Sbjct: 242 EHDLAVGHD 250 >gi|150017124|ref|YP_001309378.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149903589|gb|ABR34422.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 558 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 20/81 (24%) Query: 52 SNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + VI+D G F + +LR + I TH H DHI G+ Sbjct: 32 EDEIVIIDCGMSFPDEELLGIDLVLPDITYLLRNK-DKIKGFFITHGHEDHIGGL----P 86 Query: 98 YFLKQKRPIDVYAAPDCMKHL 118 Y LKQ + +YA + + Sbjct: 87 YVLKQIN-VPIYATKLTLGLI 106 >gi|238022099|ref|ZP_04602525.1| hypothetical protein GCWU000324_02005 [Kingella oralis ATCC 51147] gi|237866713|gb|EEP67755.1| hypothetical protein GCWU000324_02005 [Kingella oralis ATCC 51147] Length = 314 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 61/184 (33%), Gaps = 41/184 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 H LG S G P I R S ++ + E G + D G Sbjct: 1 MHLHFLGT--SSGSPAI--------------ERNVSCTALNLLPENGEI--WLFDCGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQK-RPIDVYA----APDC 114 Q+LR + I + TH H DHI G+ GL R + ++ P+ +Y Sbjct: 43 QHQILRTSIRPGKIRRIFITHLHGDHIFGLLGLLCSRSFLSGEQPGPLTLYGGAGLREFV 102 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 L S Y +YP + + + I +A L H + S Sbjct: 103 ETGLRLSRSYL-------SYP--IEFVELSETGGEIACDAA---FRVKYRLLDHA-VPSF 149 Query: 175 GFRF 178 GFR Sbjct: 150 GFRV 153 >gi|198462055|ref|XP_001352322.2| GA11591 [Drosophila pseudoobscura pseudoobscura] gi|198139769|gb|EAL29289.2| GA11591 [Drosophila pseudoobscura pseudoobscura] Length = 292 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 35/186 (18%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG + Q VLR + I ++ TH H DH+ G+ + G Sbjct: 38 GKKRILIDTGDEDVPQYIEHLNNVLRREQACIATIILTHWHHDHVGGVKDIVG------- 90 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV---IENNDVPICMKSAGGVIEA 161 + + F+ F D P + + +N+ ++ A + Sbjct: 91 -------SRLADNDCQVFK--FSRTDASDVCPEIPAHIKLQPMSNNQEFSVEGANMRVVH 141 Query: 162 IPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL---HSS 216 P + S+ G F + A + E ++ LD + LK Sbjct: 142 TPGHTTDHIVLSMDEGTLFSGDCILGEGTAVFEDLYEYMKTLDTI----LKIEPQRIFPG 197 Query: 217 HFSLSE 222 H ++ E Sbjct: 198 HGNIIE 203 >gi|170748462|ref|YP_001754722.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654984|gb|ACB24039.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 557 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 37/152 (24%), Gaps = 31/152 (20%) Query: 47 VSERGSNTTVIVDTGPDFY--MQV------------LREQVLSIDAVLYTHPHADHIHGI 92 ++VD G F Q+ + E+ + + TH H DHI I Sbjct: 28 FGPEKGRKWIMVDCGMGFAGEEQMPGVDLMFPDLSFIEERRKDLLGIFITHAHEDHIGAI 87 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + VYA L P V ++ Sbjct: 88 SELWP-----RLKAPVYATRFAKNLLETR-------RLSEPGAPKVELREVKPGR----- 130 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYC 184 + G E + H S A Sbjct: 131 RVTVGPFELEYVPVSHSIPESNAIAIRTAAGL 162 >gi|170747479|ref|YP_001753739.1| beta-lactamase domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170654001|gb|ACB23056.1| beta-lactamase domain protein [Methylobacterium radiotolerans JCM 2831] Length = 313 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 21/214 (9%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + R IVD G Y Q R + +L++H H DH G+ + L Sbjct: 43 CIEVRCGQRMFIVDAGSGIYNLGQGHRTDLPQEVDLLFSHLHLDHTAGLPFFKPAVLDPD 102 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEA 161 R I+ Y + + F +P ++ + ++ A Sbjct: 103 RVINTYCGNLGGESAGPTLDRLFAPP---LFPVTLDKLCCTFHHHGFEAGQTLAFPDGTR 159 Query: 162 IPILQQHGRISSLGFRFG----NVAYCTDVNAF---PAESL-EKLQNLDFLIIDA-LKNG 212 + + + S+G+RF + +D+ P L + + D ++ D +G Sbjct: 160 VATIMLNHPQGSVGYRFEHGGRRLCLISDIEHSDPWPDPELAAFVADADLMVYDGMFTDG 219 Query: 213 LHSS-----HFSLSESLKKIELINPKNAILTHMH 241 + + H + + ++ K + H+H Sbjct: 220 EYPTCRGWGHSTWQKGVELARNAGVKALGIIHLH 253 >gi|119488003|ref|XP_001262600.1| metallo-beta-lactamase superfamily protein [Neosartorya fischeri NRRL 181] gi|119410758|gb|EAW20703.1| metallo-beta-lactamase superfamily protein [Neosartorya fischeri NRRL 181] Length = 328 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++DTG + VL +SI +L TH H DH G+ L Y Sbjct: 60 GPSRILIDTGQGLPIWLSRIVGVLHSNNISISHILLTHWHGDHTGGVPDLISYNPTLGEH 119 Query: 106 I 106 + Sbjct: 120 V 120 >gi|146305000|ref|YP_001192316.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145703250|gb|ABP96392.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348] Length = 642 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 46/201 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD----FYMQVLRE------QVLSIDAVLYTHPHADH 88 RS++ + R V++D G + F ++ + ++ +DAV+ TH H DH Sbjct: 192 RSAVLVETPESR-----VLMDVGVNPSVNFGERMFPKLDIDQLRLEDLDAVVLTHAHLDH 246 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----------PIV 138 + + K VY + D P ++ Sbjct: 247 SG----MIPFLFKYGYDGPVYTTQPTRDIMALMQLDLLDVADKEGRPLPYSAKEVRKELL 302 Query: 139 NPIVIE-------NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN--- 188 + I ++ D+ + +AG +I + H +G N+ Y D Sbjct: 303 HTITLDYEEVTDIAPDIRLTFYNAGHII-GSAMAHLH-----IGDGVHNLVYTGDFKYAR 356 Query: 189 -AFPAESLEKLQNLDFLIIDA 208 ++ + +D LI++ Sbjct: 357 TRLLDRAVSEFPRVDTLIMET 377 >gi|172056409|ref|YP_001812869.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171988930|gb|ACB59852.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 283 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 17/120 (14%) Query: 51 GSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G + ++++D G F ++ + + D V TH H DHI GI ++ Sbjct: 30 GDDRSLVIDAGNSSQHATLFLEEMKNQGLGRPDLVALTHWHWDHIFGI---------KQM 80 Query: 105 PIDVYAAPDCMKHLFESFRYCF--KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + A ++ + + Y + +AL++R I P + + VI Sbjct: 81 AVPTIATHRTVEEIQKMLDYEWTDEALEERIRQGIEIPFCADAIKLEFGKDREIEVILPT 140 >gi|290581108|ref|YP_003485500.1| hypothetical protein SmuNN2025_1582 [Streptococcus mutans NN2025] gi|254998007|dbj|BAH88608.1| hypothetical protein [Streptococcus mutans NN2025] Length = 560 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 V I A++ TH H DHI GI FL ++ I +YA P + + D Sbjct: 65 NVDRIKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIRGKLEEHGLLRDA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I + + ++ + I + H G++ G F+F Sbjct: 120 KMYE-INHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFD 170 >gi|167766331|ref|ZP_02438384.1| hypothetical protein CLOSS21_00835 [Clostridium sp. SS2/1] gi|317499655|ref|ZP_07957915.1| hypothetical protein HMPREF0996_02899 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712050|gb|EDS22629.1| hypothetical protein CLOSS21_00835 [Clostridium sp. SS2/1] gi|291558974|emb|CBL37774.1| Predicted hydrolase (metallo-beta-lactamase superfamily) [butyrate-producing bacterium SSC/2] gi|316893069|gb|EFV15291.1| hypothetical protein HMPREF0996_02899 [Lachnospiraceae bacterium 5_1_63FAA] Length = 587 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 58 VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +D + +L V ++ V+ THPH DHI G+ Sbjct: 82 IDVSDRVHQYLLDHGVKHLEFVVLTHPHGDHIGGM 116 >gi|119389195|pdb|2DKF|A Chain A, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389196|pdb|2DKF|B Chain B, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389197|pdb|2DKF|C Chain C, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily gi|119389198|pdb|2DKF|D Chain D, Crystal Structure Of Ttha0252 From Thermus Thermophilus Hb8, A Rna Degradation Protein Of The Metallo-Beta-Lactamase Superfamily Length = 431 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 61/201 (30%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH H DH+ + L ++ Sbjct: 22 GGRRVLLDCGXFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDCM--------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 VYA + L F D + P+ + A G Sbjct: 78 GPVYATRATVLLXEIVLEDALKVXDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|289572046|ref|ZP_06452273.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545800|gb|EFD49448.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length = 388 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 81/274 (29%), Gaps = 78/274 (28%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL 95 T S + IS V + G + V +D G + D A+ TH H DHI Sbjct: 87 TPSRVGISSVLKIGRDLYV-IDCGLGSLNAFTNAGLQFDDLKAMFITHLHTDHIV---DY 142 Query: 96 RGYFL-------KQKRPIDVY----------------------------AAPDCMKHLFE 120 +FL + P+ VY + L Sbjct: 143 YNFFLSGGFLAPPGRAPVLVYGPGPAGGLPPSEVGNPNPATVNPANPTPGLAAATEALHR 202 Query: 121 SFRY---CF------------KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +F Y F + + PP + P + ++ + L Sbjct: 203 AFAYTSNIFIRDYGIDNVADLVKVTEIGLPPGSDYRNRAPKMSPFSV-ASDDNVSVTATL 261 Query: 166 QQHGRI-SSLGFRFG------NVAYCTDVNAFPAESLEKLQNLDFLIIDAL--------- 209 H + + GFRF +V + D + Q D L+ +A+ Sbjct: 262 VSHYDVYPAFGFRFDLKKSGVSVTFSGDTTK-SDNLITLAQGTDILVHEAVFSLDTAYFG 320 Query: 210 ----KNGLHSSHFSLSESLKKIELINPKNAILTH 239 N L +SH S + + PK IL+H Sbjct: 321 NAFPPNYLVNSHTSAEQVGEVAAAAKPKQLILSH 354 >gi|168242696|ref|ZP_02667628.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451017|ref|YP_002046908.1| beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409321|gb|ACF69540.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338243|gb|EDZ25007.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|197262305|ref|ZP_03162379.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197240560|gb|EDY23180.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|161615868|ref|YP_001589833.1| hypothetical protein SPAB_03660 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365232|gb|ABX69000.1| hypothetical protein SPAB_03660 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|197120332|ref|YP_002140759.1| beta-lactamase superfamily metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197089692|gb|ACH40963.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter bemidjiensis Bem] Length = 558 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 43/134 (32%), Gaps = 30/134 (22%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + VIVD G F L E+ I A+L TH H DHI + Y Sbjct: 32 GDDIVIVDCGLMFPEPYMLGIDVVIPDIGYLIERADRIRAILLTHGHEDHIGAL----PY 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L+ P +Y + + E L + V+ V++ D G Sbjct: 88 VLRDINP-PIYGTALTLGFVKEK-------LKEFELDQKVDLRVVKPRD-----TVQLGS 134 Query: 159 IEAIPILQQHGRIS 172 E I H + Sbjct: 135 FEVEFIRVAHSIVD 148 >gi|62181451|ref|YP_217868.1| beta-lactamase family hydrolase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224584729|ref|YP_002638527.1| hypothetical protein SPC_2995 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62129084|gb|AAX66787.1| putative metal-dependent hydrolases of the beta-lactamase superfamily II [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224469256|gb|ACN47086.1| hypothetical protein SPC_2995 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715935|gb|EFZ07506.1| beta-lactamase family hydrolase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|170740572|ref|YP_001769227.1| beta-lactamase domain-containing protein [Methylobacterium sp. 4-46] gi|168194846|gb|ACA16793.1| beta-lactamase domain protein [Methylobacterium sp. 4-46] Length = 289 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 40/245 (16%) Query: 46 RVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V R ++D G + +L++H H DH+ G+ + L + Sbjct: 36 CVEIRCGERLFVIDAGTGINALGAYHGADLPQRIDLLFSHLHLDHVTGLAFFKPAVLDRT 95 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-------- 155 R I Y + +A +R + P + PI ++ Sbjct: 96 REIHTYCGNLDGESA--------EAPLNRLFSPPLFPITLDALPARFVHHGFRAGETLTF 147 Query: 156 --GGVIEAIPILQQHGRISSLGFRF---GNVA-YCTDVNAF---PAES-LEKLQNLDFLI 205 G + +P+ G + G+RF G A Y +D+ P + L +++ D ++ Sbjct: 148 ADGSTVATLPLQHPQG---ATGYRFRHAGRTACYISDIEHSEPWPERNLLNFVRDADLVV 204 Query: 206 IDA-LKNGLHSS-----HFSLSESLKKIELINPKNAILTHM---HVDLDYDMVLKSTPSR 256 D G + + H + + ++ N + H+ H D + + K+ + Sbjct: 205 YDGMFTEGEYPACRGWGHSTWEKGVELCRAANVGRLGIIHLYPQHSDAELRDMEKALQAA 264 Query: 257 VVPAF 261 + AF Sbjct: 265 MPTAF 269 >gi|291279201|ref|YP_003496036.1| hypothetical protein DEFDS_0802 [Deferribacter desulfuricans SSM1] gi|290753903|dbj|BAI80280.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 291 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 41/203 (20%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID--------AVLYTHPHADHIHGIDGLRGYFLKQK 103 ++ ++ D+ D ID A+ +TH HADH+ G +F K Sbjct: 26 NDEVILFDSCLD------ASNAKKIDKLLGKSVKAIFHTHSHADHVGG-----DFFFHNK 74 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKAL--DDRTYPPIVNPIV-IENNDVPICMKSAGGVIE 160 +VY + + L ++ Y +L Y I + + E + + A +++ Sbjct: 75 YRCEVYIHKNELSFL--TYPYLEPSLLYGGAAYTAITSKFLKAEKVESAKPIDLATQILD 132 Query: 161 AIPILQ----QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + I H GF+ N+ + D F E +EK + L + Sbjct: 133 DLNIEIIDLPGHSPAQI-GFKIENILFVGDA-LFSEELIEKYK---------LLYLFNPK 181 Query: 217 HFSLSESLKKIELINPKNAILTH 239 +SL+K+E +N + I H Sbjct: 182 --EYYKSLEKLEKLNFEKIIFCH 202 >gi|238794446|ref|ZP_04638056.1| Hydroxyacylglutathione hydrolase [Yersinia intermedia ATCC 29909] gi|238726241|gb|EEQ17785.1| Hydroxyacylglutathione hydrolase [Yersinia intermedia ATCC 29909] Length = 251 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 A+L TH H DH+ G+ LR + I VY + Sbjct: 48 AILLTHHHNDHVGGVAELR----RHFPDIPVYGPQETAN 82 >gi|330835859|ref|YP_004410587.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567998|gb|AEB96103.1| beta-lactamase domain-containing protein [Metallosphaera cuprina Ar-4] Length = 638 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 46/201 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD----FYMQVLRE------QVLSIDAVLYTHPHADH 88 RS++ + R +++D G + F ++ + ++ +DAV+ TH H DH Sbjct: 192 RSAVLVETPESR-----ILMDVGVNPSVNFGERMFPKLDIDQLRLEDLDAVVLTHAHLDH 246 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP----------PIV 138 + + K VY + D P ++ Sbjct: 247 SG----MIPFLFKYGYEGPVYTTQPTRDIMALMQLDMLDVADKEGRPLPYSAKEVRKELL 302 Query: 139 NPIVIE-------NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN--- 188 + I ++ D+ + +AG +I + H +G N+ Y D Sbjct: 303 HTITLDYEEVTDIAPDIRLTFYNAGHII-GSAMAHLH-----IGDGVHNLVYTGDFKYAR 356 Query: 189 -AFPAESLEKLQNLDFLIIDA 208 ++ + +D LI++ Sbjct: 357 TRLLDRAVSEFPRVDTLIMET 377 >gi|322390354|ref|ZP_08063881.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] gi|321142955|gb|EFX38406.1| metallo-beta-lactamase superfamily protein [Streptococcus parasanguinis ATCC 903] Length = 553 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGTELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ N + G H S+G GN+ Y Sbjct: 105 SNDS-VKKFNDFHVIDQNS-----EIDFGDAVVSFFQTTHSIPESIGIVIGTPEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|312867522|ref|ZP_07727730.1| ribonuclease J 2 [Streptococcus parasanguinis F0405] gi|311096928|gb|EFQ55164.1| ribonuclease J 2 [Streptococcus parasanguinis F0405] Length = 553 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGTELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ N + G H S+G GN+ Y Sbjct: 105 SNDS-VKKFNDFHVIDQNS-----EIDFGDAVVSFFQTTHSIPESIGIVIGTPEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|312869025|ref|ZP_07729202.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] gi|311095451|gb|EFQ53718.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3] Length = 597 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LR++ I V TH HAD I + YFL + V+ + + + + + Sbjct: 55 LRDRKDKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKKHKEV 109 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I I + G I G F+F A Sbjct: 110 KKFNDFHVVDAGTAIDFNDVTVSFFQTTHTIPETLGIVLETAEGNIVYTGDFKFDQTATK 169 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 170 GYQTDLARLAE 180 >gi|291087856|ref|ZP_06347692.2| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|291073806|gb|EFE11170.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] Length = 290 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR 96 SL I + D G F L E + +D ++ +H H DH G++ Sbjct: 41 SLLIEH-----GGKRFLFDAGQTGVFLHNAEKLGEDLTQLDGIILSHGHFDHCGGLE--- 92 Query: 97 GYFLKQKRPIDVY 109 +F VY Sbjct: 93 -FFGDALPRCPVY 104 >gi|289812355|ref|ZP_06542984.1| hypothetical protein Salmonellaentericaenterica_52007 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 147 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 31/141 (21%) Query: 159 IEAIPILQQHGRIS---SLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDALKN 211 + + H + +RF + + D + FP + Q D L+ +A+ Sbjct: 8 VTISALKVPHSPFPDGEAFAYRFDTQGKRIVFSGDTSWFPPLA-TFAQGADILVHEAVHV 66 Query: 212 GLHSS------------------HFSLSESLKKIELINPKNAILTHM-----HVDLDYDM 248 + H ++ + K + K +L+H+ D+ Sbjct: 67 PSVAKLANSIGNGKTLAEAIASHHTTIEDVGKIAREAHVKKLVLSHLVPATVADDVWQQE 126 Query: 249 VLKSTPSRVVPAFDGMQFSSP 269 +K+ P V+ D M S P Sbjct: 127 AMKNYPGPVIVGHDNMTISVP 147 >gi|39995245|ref|NP_951196.1| ribonuclease Z [Geobacter sulfurreducens PCA] gi|39982007|gb|AAR33469.1| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|298504250|gb|ADI82973.1| ribonuclease Z [Geobacter sulfurreducens KN400] Length = 366 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 R +++VD G + + + SIDAV +H H DH G+D L + R ++++ Sbjct: 29 RPLGRSILVDCGQI--HHLAKRVLKSIDAVFVSHAHMDHFMGLDTLVRHIHVSPRTVELF 86 Query: 110 AAP 112 P Sbjct: 87 GPP 89 >gi|160887147|ref|ZP_02068150.1| hypothetical protein BACOVA_05163 [Bacteroides ovatus ATCC 8483] gi|299148639|ref|ZP_07041701.1| ribonuclease Z [Bacteroides sp. 3_1_23] gi|156107558|gb|EDO09303.1| hypothetical protein BACOVA_05163 [Bacteroides ovatus ATCC 8483] gi|298513400|gb|EFI37287.1| ribonuclease Z [Bacteroides sp. 3_1_23] Length = 312 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 33/181 (18%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 40 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHL 118 MQ+ R ++ ++ + +H H DH G+ GL F R + +++ + Sbjct: 41 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPRGLEELF 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + K L + + E + + + IP+ RI GF F Sbjct: 101 APMLAFFCKTLTYKVF-----FHEFETKEPMLIYDDRSVTVTTIPLKH---RIPCCGFLF 152 Query: 179 G 179 Sbjct: 153 E 153 >gi|116753406|ref|YP_842524.1| beta-lactamase domain-containing protein [Methanosaeta thermophila PT] gi|116664857|gb|ABK13884.1| beta-lactamase domain protein [Methanosaeta thermophila PT] Length = 635 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 21/154 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK-HLFESFRYCFKAL 129 + IDAV+ TH H DH L K +Y P ++ Y A Sbjct: 230 YPLSQIDAVVLTHAHLDHSG----LVPMLYKYGYEGPIYCTPPTRDLYVLLQLDYIEVAG 285 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLG-----FRFG--- 179 + P + ++ E I + G V + P + H LG F G Sbjct: 286 REGKRLPYDSSMIREALKHTITLN-YGDVTDIAPDTKLTMHNAGHILGSAIAHFHIGDGL 344 Query: 180 -NVAYCTDVN----AFPAESLEKLQNLDFLIIDA 208 NVA+ D ++ L+ L+I+A Sbjct: 345 YNVAFTGDFKYEKTRLFDPAVNSFPRLETLVIEA 378 >gi|260598601|ref|YP_003211172.1| hypothetical protein CTU_28090 [Cronobacter turicensis z3032] gi|260217778|emb|CBA32223.1| hypothetical protein CTU_28090 [Cronobacter turicensis z3032] Length = 304 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 17/109 (15%) Query: 44 ISRVSERGSNTTVIVDTGPD---------FYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 I+ + ++VDTG + + ID VL TH HADH G+ Sbjct: 71 INAYVINTGDKLILVDTGAGALLGNNGGHLPENLRAAGIDPSQIDTVLLTHVHADHSGGV 130 Query: 93 D-GLRGYFLK-----QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + F +R +D++ P K + S R+ F + P Sbjct: 131 QRDGKPVFPNATVRVDQRDLDLWLNPAREKEVEASQRHTFAESERSLRP 179 >gi|254512322|ref|ZP_05124389.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium KLH11] gi|221536033|gb|EEE39021.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium KLH11] Length = 555 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 61/226 (26%), Gaps = 53/226 (23%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + E G ++VD G F L+E+ ++A+ TH H D Sbjct: 21 AYVYGYGEPGQERLILVDLGVAFPDMDSSPGVDLIFADISWLKERADRLEAIFVTHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + + +YA D P Sbjct: 81 HVGAVAH----CYEALGA-PIYARAFTANIARRKM--------DEHGHPTEAVRTASAWP 127 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 I + G + H S G G V + D F + Sbjct: 128 EQIKV----GPFSVGFLPVSHSIPESAGLVIETPAGRVVHTGDFKLDADPIVGEPFDPDL 183 Query: 195 LEKLQ--NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 ++ + LI D+ + SSH SES + P+ L Sbjct: 184 WAEVAKPGVKALICDS--TNVFSSHPGRSES-----EVGPEITRLV 222 >gi|83591368|ref|YP_425120.1| beta-lactamase-like protein [Rhodospirillum rubrum ATCC 11170] gi|83574282|gb|ABC20833.1| Beta-lactamase-like [Rhodospirillum rubrum ATCC 11170] Length = 279 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADHI 89 +S+ I+ RG TV++D G +L + +ID +L TH H DH+ Sbjct: 52 TSIPINAYLVRGGGRTVLIDAGAGGVKPGGGRLKTNLLLAGIQPAAIDTILVTHAHPDHV 111 Query: 90 HGIDGLRG 97 G+ G Sbjct: 112 GGLMDASG 119 >gi|313678861|ref|YP_004056601.1| family protein [Mycoplasma bovis PG45] gi|312950450|gb|ADR25045.1| metallo-beta-lactamase family protein [Mycoplasma bovis PG45] Length = 614 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 27/136 (19%) Query: 56 VIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L+E+ +I+ + TH H DHI G+ Y +KQ Sbjct: 29 VIIDAGIKFADTATTGIKGIIPDYKYLKERKDNIEGLFITHGHEDHIGGV----VYLVKQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 +YA +++L F D+ V I IE + V + G I+ Sbjct: 85 VHLKRIYAPKIAIQYLKLKF-------DEHKITHKVEFIEIEKSAV---HEFGNGKIKVD 134 Query: 163 PILQQHGRISSLGFRF 178 QH + G R Sbjct: 135 FWTAQHSIPDAFGIRV 150 >gi|260591526|ref|ZP_05856984.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] gi|260536557|gb|EEX19174.1| metallo-beta-lactamase family protein [Prevotella veroralis F0319] Length = 416 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 19/137 (13%) Query: 52 SNTTVIVDTGPDFYMQVLRE----QVLSI----DAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +I+D G + ++E QV I DA+ YTH H DHI G+ L Sbjct: 23 TKAKIIIDLGSNLPGNRIKELTVEQVTQITADADAIFYTHYHGDHI-GLFHLVP------ 75 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I Y ++ + + K +D + +N + + PI +K I P Sbjct: 76 NDIPQYVGKGALEVIKCKYDTLSKHIDTKEEQNTINHMRTYFANEPIQIK----DIRITP 131 Query: 164 ILQQHGRISSLGFRFGN 180 H + F+ + Sbjct: 132 YFCSHSAFDAYMFKIES 148 >gi|119713164|gb|ABL97233.1| putative alkyl sulfatase/beta-lactamase [uncultured marine bacterium EB0_49D07] Length = 572 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 15/83 (18%) Query: 50 RGSNTTVIVDTGPDFYM--------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 G N +I+D Y Q + I A++YTH HADH G YF+ Sbjct: 73 EGDNGNIIIDATDSVYQAEKVYAKFQAINSNP--ISAIIYTHNHADHTLG----ASYFVD 126 Query: 102 QKRPID-VYAAPDCMKHLFESFR 123 Q+ + A K + + F Sbjct: 127 QQLDAPLIIAHDSTAKAVEKLFG 149 >gi|16766256|ref|NP_461871.1| metal-dependent hydrolase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16421500|gb|AAL21830.1| putative metal-dependent hydrolases of the beta-lactamase superfamily II [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|312913969|dbj|BAJ37943.1| putative metal-dependent hydrolase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DSSRIICHPDIAR 95 >gi|262277285|ref|ZP_06055078.1| ribonuclease J 1 (RNase J1) [alpha proteobacterium HIMB114] gi|262224388|gb|EEY74847.1| ribonuclease J 1 (RNase J1) [alpha proteobacterium HIMB114] Length = 555 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 26/94 (27%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSID-----------------AVLYTHPHADHI 89 E ++ ++VD G F E V ID ++ TH H DHI Sbjct: 27 FGEPNNHKWLMVDCGITFAE----ESVPGIDVIIPDPDFIYQNRNNCVGIIITHGHEDHI 82 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + + +YA P + E F+ Sbjct: 83 GALTHVWPNLKTN-----IYATPFTGALIREKFK 111 >gi|167772107|ref|ZP_02444160.1| hypothetical protein ANACOL_03481 [Anaerotruncus colihominis DSM 17241] gi|167665905|gb|EDS10035.1| hypothetical protein ANACOL_03481 [Anaerotruncus colihominis DSM 17241] Length = 832 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 29/207 (14%) Query: 53 NTTVIVDTGPDFY-MQVL------------REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N IVD G F +L ++ + ++ TH H DHI + YF Sbjct: 306 NDMFIVDCGMTFPDENMLGVDLVLPDFTYVQKNRDKLRGIVITHGHEDHIGAL----PYF 361 Query: 100 LKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 LKQ + VYA + + + + P + I + + Sbjct: 362 LKQIN-VPVYATRLTLGLIENKLREHGLYGKVKLVQIAPRETIKLGCMEVEFIRVNHSIP 420 Query: 158 VIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLII-----DALKN 211 A+ I G I G F+ D+ +L L + +A + Sbjct: 421 DAVALAIHTPAGVIIQTGDFKIDYTPIIGDI--IDLARFGELGGQGVLALLSDSTNAERP 478 Query: 212 GLHSSHFSLSESLK-KIELINPKNAIL 237 G + ++++S + K I+ Sbjct: 479 GFTPTEVTVADSFDKLFKQAGHKRIII 505 >gi|145503902|ref|XP_001437923.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405084|emb|CAK70526.1| unnamed protein product [Paramecium tetraurelia] Length = 826 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 94/307 (30%), Gaps = 92/307 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 Y +LG +S+ +N+ +S + + +N +++D G Sbjct: 464 KSYEVLMLGTSSSI-----------------ENQSRNAS----GIHVKINNVGILMDCGQ 502 Query: 63 DFYMQV---------LREQVLSIDAVLYTHPHADHIHGIDGL---------RGYFLKQKR 104 + Q ++++ + + +H H DH G+ +FL + Sbjct: 503 NTLNQFYFSCQDDGDFKQKISDLQVIYISHSHNDHHQGLYDFIKHKCAVSKEPFFLLLPK 562 Query: 105 PIDVYAAPDCMKHLFESFR---YC---------------FKALDDRTYPPIVNPIVIENN 146 PI ++ + E F Y F+ N +E+ Sbjct: 563 PIYLWYSQLFTNLFREEFGMKSYVNQVKIVFTDALISSNFQEKAQPKQKKTFNVNQLESE 622 Query: 147 DVPIC-----MKSAGGVIEAIPILQ-----------QHG------RISSLGFRFGNVAYC 184 + P + E LQ QH ++SS G + Y Sbjct: 623 EFPEINFSSKFDNNLNKTEFQEFLQYKQLHLDIEMTQHCQYSTAIKMSSNG---KTLVYS 679 Query: 185 TD----VNAFPAESLEKLQNLDFLIIDALKNGL------HSSHFSLSESLKKIELINPKN 234 +D + F + + ++ D LI + + H + ++ +N KN Sbjct: 680 SDRLGQLTKFGTKFSKFAKDCDLLIHECTYPDEMVEKALSAKHSTFLQAFFNGYQLNAKN 739 Query: 235 AILTHMH 241 ++TH Sbjct: 740 LVMTHFT 746 >gi|78060347|ref|YP_366922.1| Beta-lactamase-like [Burkholderia sp. 383] gi|77964897|gb|ABB06278.1| Beta-lactamase-like protein [Burkholderia sp. 383] Length = 283 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 10/66 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPD--------FYMQVLREQVL--SIDAVLYTHPHADH 88 +++ I+ RG+ TV++D G ++ + +ID +L TH H DH Sbjct: 51 PAAVHINCYVVRGAGRTVLIDGGAGGFKQWGGQLRTNLVLAGIEPVAIDTILLTHAHPDH 110 Query: 89 IHGIDG 94 + G+ Sbjct: 111 VGGLVD 116 >gi|293370855|ref|ZP_06617400.1| ribonuclease Z [Bacteroides ovatus SD CMC 3f] gi|292634071|gb|EFF52615.1| ribonuclease Z [Bacteroides ovatus SD CMC 3f] Length = 315 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 31/180 (17%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ ++D G Sbjct: 5 EKFELHILGCGSAL----------------PTTRHFATSQVVNL-----REKLFMIDCGE 43 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-APDCMKHLF 119 MQ+ R ++ ++ + +H H DH G+ GL F R D++ +P ++ LF Sbjct: 44 GAQMQLRRSRLKFSRLNHIFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPRGLEELF 103 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 F +T V E + + + IP+ RI GF F Sbjct: 104 APMLAFF----CKTLTYKVFFHEFETKEPMLIYDDRSVTVTTIPLKH---RIPCCGFLFE 156 >gi|171780061|ref|ZP_02920965.1| hypothetical protein STRINF_01849 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281409|gb|EDT46844.1| hypothetical protein STRINF_01849 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 213 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 16/81 (19%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGI 92 R + L + ++VD G + ++E++ +ID A+L TH H DHI G+ Sbjct: 12 RENTYLLV------NDQAIIVVDPGSNTDK--IKEKITAIDKPIAAILITHAHYDHIMGL 63 Query: 93 DGLRGYFLKQKRPIDVYAAPD 113 D +R F +P VY + Sbjct: 64 DVIRDAF---GQP-PVYISEK 80 >gi|156083553|ref|XP_001609260.1| hypothetical protein [Babesia bovis T2Bo] gi|154796511|gb|EDO05692.1| hypothetical protein BBOV_IV000940 [Babesia bovis] Length = 954 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 23/120 (19%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + T LG GA P R SS+ SR + D G Sbjct: 415 GQWRLTFLGTGA----------------RRPTKTRLTSSILFSRA----DAPLWLFDCGE 454 Query: 63 DFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + + + + TH H DH +G+ L +++Y K + + Sbjct: 455 GAFSSIWDAGHSPLRVKRIFITHLHGDHCYGLFSFLS-TLSPTGALEIYGPRGLSKFIAD 513 >gi|94958251|gb|ABF47257.1| metallo-beta-lactamase family protein [Staphylococcus xylosus] Length = 207 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 46/143 (32%), Gaps = 16/143 (11%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + ++VD D ++ L + + AVL TH H DHI +D + +K + Sbjct: 19 ENDTSVILVDPANDSDLIIKKLNQINKKLVAVLLTHGHFDHIGALDDII-----EKYDVP 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+ L + P VI N P ++ +E Sbjct: 74 VFMHKSEFDFLTN-----VTKNGSEKFKQYGLPNVISNA-KPQPLEEGDANVEGFHFNVL 127 Query: 168 HGRISSLG---FRFGNVAYCTDV 187 H S G F F A D Sbjct: 128 HTPGHSPGSLTFIFNEFAVVGDT 150 >gi|145589705|ref|YP_001156302.1| beta-lactamase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|229553934|sp|A4SZ24|Y1524_POLSQ RecName: Full=UPF0173 metal-dependent hydrolase Pnuc_1524 gi|145048111|gb|ABP34738.1| beta-lactamase domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 285 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 20/168 (11%) Query: 53 NTTVIVDT-------GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKR 104 +++D P Y L + ID +L TH H DH+ + + K Sbjct: 57 GKMILIDPWITGGPKTPPMYKNDLAA-IGPIDLLLVTHAHVDHLGDAPTIAKTNNTKLYG 115 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI--ENNDVPICMKSAGGVIEAI 162 P D+ + L Y F T P + + E++ + + A +E+ Sbjct: 116 PADMVTPLTTLGVLPAELGYRFNKTGQVTPLPGIKVTAVQAEHSSLLVWKNPATDKLESH 175 Query: 163 PILQQHGRISSL--GFRF---GNVAYCTDVNAFPAESLEKLQNLDFLI 205 P + G I L GF+ G+ +D+ L LI Sbjct: 176 PAGEPMGYIIELENGFKIWHMGDTGLFSDMKFISEHYKPDL----VLI 219 >gi|329576551|gb|EGG58058.1| ribonuclease J 2 [Enterococcus faecalis TX1467] Length = 494 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 53 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 104 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 154 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 155 EGNIVYTGDFK-FDQSAIEMYQ 175 >gi|323480418|gb|ADX79857.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis 62] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|315166604|gb|EFU10621.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315172782|gb|EFU16799.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 565 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 53 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 104 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 154 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 155 EGNIVYTGDFK-FDQSAIEMYQ 175 >gi|315151369|gb|EFT95385.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|293383252|ref|ZP_06629168.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|291079430|gb|EFE16794.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] Length = 565 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 53 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 104 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 154 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 155 EGNIVYTGDFK-FDQSAIEMYQ 175 >gi|260438919|ref|ZP_05792735.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] gi|292808570|gb|EFF67775.1| metallo-beta-lactamase family protein [Butyrivibrio crossotus DSM 2876] Length = 531 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 9/69 (13%) Query: 53 NTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++VD G DF L + ID VL TH H DH + + D Sbjct: 23 GRYILVDCGMEQGTDDFETAELPMNIADIDYVLLTHAHIDHSG----MLPLLYARGFRGD 78 Query: 108 VYAAPDCMK 116 V A P + Sbjct: 79 VIATPATVD 87 >gi|257082858|ref|ZP_05577219.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|256990888|gb|EEU78190.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|315169867|gb|EFU13884.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|256962225|ref|ZP_05566396.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|293387593|ref|ZP_06632139.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|312907160|ref|ZP_07766151.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909779|ref|ZP_07768627.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|256952721|gb|EEU69353.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|291082925|gb|EFE19888.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|310626188|gb|EFQ09471.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311289737|gb|EFQ68293.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|255976137|ref|ZP_05426723.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|307279003|ref|ZP_07560061.1| hypothetical protein HMPREF9515_01319 [Enterococcus faecalis TX0860] gi|255969009|gb|EET99631.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|306504128|gb|EFM73340.1| hypothetical protein HMPREF9515_01319 [Enterococcus faecalis TX0860] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|229550326|ref|ZP_04439051.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis ATCC 29200] gi|307268704|ref|ZP_07550073.1| hypothetical protein HMPREF9498_00836 [Enterococcus faecalis TX4248] gi|307273528|ref|ZP_07554771.1| hypothetical protein HMPREF9514_02294 [Enterococcus faecalis TX0855] gi|307274491|ref|ZP_07555674.1| hypothetical protein HMPREF9521_00118 [Enterococcus faecalis TX2134] gi|307288514|ref|ZP_07568500.1| hypothetical protein HMPREF9505_01897 [Enterococcus faecalis TX0109] gi|312951054|ref|ZP_07769962.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229304589|gb|EEN70585.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis ATCC 29200] gi|306500589|gb|EFM69920.1| hypothetical protein HMPREF9505_01897 [Enterococcus faecalis TX0109] gi|306508885|gb|EFM77972.1| hypothetical protein HMPREF9521_00118 [Enterococcus faecalis TX2134] gi|306509805|gb|EFM78832.1| hypothetical protein HMPREF9514_02294 [Enterococcus faecalis TX0855] gi|306515016|gb|EFM83562.1| hypothetical protein HMPREF9498_00836 [Enterococcus faecalis TX4248] gi|310631009|gb|EFQ14292.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315035071|gb|EFT47003.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315154091|gb|EFT98107.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315157378|gb|EFU01395.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315575756|gb|EFU87947.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] Length = 565 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 53 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 104 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 154 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 155 EGNIVYTGDFK-FDQSAIEMYQ 175 >gi|227518439|ref|ZP_03948488.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] gi|227074117|gb|EEI12080.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|29375760|ref|NP_814914.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227552969|ref|ZP_03983018.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|255973098|ref|ZP_05423684.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|256618768|ref|ZP_05475614.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256762188|ref|ZP_05502768.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256958677|ref|ZP_05562848.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256965415|ref|ZP_05569586.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|257077969|ref|ZP_05572330.1| metallo-beta-lactamase family hydrolase [Enterococcus faecalis JH1] gi|257085556|ref|ZP_05579917.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|257086538|ref|ZP_05580899.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|257089595|ref|ZP_05583956.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257415802|ref|ZP_05592796.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis AR01/DG] gi|257419011|ref|ZP_05596005.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257422904|ref|ZP_05599894.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|294781100|ref|ZP_06746450.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300860070|ref|ZP_07106158.1| putative Ribonuclease J 2 [Enterococcus faecalis TUSoD Ef11] gi|312899656|ref|ZP_07758980.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312903935|ref|ZP_07763104.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|29343221|gb|AAO80984.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227177939|gb|EEI58911.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis HH22] gi|255964116|gb|EET96592.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|256598295|gb|EEU17471.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256683439|gb|EEU23134.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256949173|gb|EEU65805.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256955911|gb|EEU72543.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|256985999|gb|EEU73301.1| metallo-beta-lactamase family hydrolase [Enterococcus faecalis JH1] gi|256993586|gb|EEU80888.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|256994568|gb|EEU81870.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|256998407|gb|EEU84927.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257157630|gb|EEU87590.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ARO1/DG] gi|257160839|gb|EEU90799.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|257164728|gb|EEU94688.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|294451778|gb|EFG20230.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300850888|gb|EFK78637.1| putative Ribonuclease J 2 [Enterococcus faecalis TUSoD Ef11] gi|310632655|gb|EFQ15938.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311293162|gb|EFQ71718.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315027738|gb|EFT39670.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315031513|gb|EFT43445.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315145496|gb|EFT89512.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315147667|gb|EFT91683.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315162559|gb|EFU06576.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315165402|gb|EFU09419.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315578284|gb|EFU90475.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315579800|gb|EFU91991.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|327534810|gb|AEA93644.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis OG1RF] Length = 562 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|291460326|ref|ZP_06599716.1| metallo-beta-lactamase family protein YycJ [Oribacterium sp. oral taxon 078 str. F0262] gi|291417081|gb|EFE90800.1| metallo-beta-lactamase family protein YycJ [Oribacterium sp. oral taxon 078 str. F0262] Length = 265 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 31/169 (18%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVL-------SIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 T +++D G + + E + I+ + TH H DHI + ++ Sbjct: 19 DEETHILIDVGVT--QKAITEGLSALSLSLSDINGIFLTHEHIDHI-----RAVGTISRR 71 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I +Y + L E+ +++PI+ + +E +P Sbjct: 72 YGIPIYG---TLATLRET---LLSKSLGDFDRGLLHPILPD-------QSIRIASLEILP 118 Query: 164 ILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H + +R + A TD+ F L++LD ++I+A Sbjct: 119 FSIDHDAADPVAYRVRSGEKCAAVTTDLGHFDDYICGHLRDLDAVLIEA 167 >gi|229828400|ref|ZP_04454469.1| hypothetical protein GCWU000342_00461 [Shuttleworthia satelles DSM 14600] gi|229792994|gb|EEP29108.1| hypothetical protein GCWU000342_00461 [Shuttleworthia satelles DSM 14600] Length = 210 Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 47 VSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + + G +I+D G LR++ L + AVL TH HADH GI+ L + K Sbjct: 18 IHKEGEKEALIIDPGAAGRQLAEHLRKEGLRLAAVLLTHGHADHAGGIEDLL---RELKD 74 Query: 105 PIDVYAAP 112 + V A Sbjct: 75 RVPVIAYE 82 >gi|325963454|ref|YP_004241360.1| RNAse Z [Arthrobacter phenanthrenivorans Sphe3] gi|323469541|gb|ADX73226.1| RNAse Z [Arthrobacter phenanthrenivorans Sphe3] Length = 251 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 50/176 (28%), Gaps = 41/176 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 ILG + VP T N R + D G Sbjct: 3 QLVILGT--ASQVP---------TRTRNHNG----------YLLRWDGEGFLFDPGEGTQ 41 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFES 121 Q++ V I + TH H DH G+ G+ R P+ ++ + Sbjct: 42 RQMIHAGVSANQITRICLTHVHGDHCFGLPGVLSRMALDGVAHPVHLHYPASGEDTVRSL 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR 177 +D R +P V E DV QH RI + G+R Sbjct: 102 VSVSSPGIDLRLHPHGAGGTVAEGLDVR---------------PLQH-RIETYGYR 141 >gi|229490895|ref|ZP_04384730.1| ribonuclease J [Rhodococcus erythropolis SK121] gi|229322285|gb|EEN88071.1| ribonuclease J [Rhodococcus erythropolis SK121] Length = 669 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 20/117 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ ++AV+ TH H DHI + + L+ + I V A + + Sbjct: 171 PDFRY--IEDRMDDVEAVILTHGHEDHIGAL----PFLLRLRADIPVIGAKFTLALVAA- 223 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P ++E + G + H +L Sbjct: 224 ----------KCREHRLRPNLVEVVEGNTTTH---GPFDCEYFAVNHSIPDALAIAI 267 >gi|198420303|ref|XP_002119433.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 367 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 65/214 (30%), Gaps = 66/214 (30%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 LG G+ P C R S+L I + ++D G Q+ Sbjct: 5 FLGTGSGYPTP--------C--------RGASALAIRYEGDVW-----LIDCGEGTQTQI 43 Query: 69 LREQ---VLSIDAVLYTHPHADHIHGIDGL----RGYFLKQKRPIDVYAAPDCMKHLFE- 120 ++ + I + TH H DH+ G+ GL + + +++Y + L E Sbjct: 44 MKLKTIRPGQISKIFITHLHGDHMFGLPGLLCTISMKTVSNLKLVEIYGPLGLRRFLREA 103 Query: 121 --------SFRYCFKALD------DRTYPPIVNPIVIENNDVP-----ICMKSAGGVI-- 159 +F+Y + D P + + + C + G I Sbjct: 104 LNLSRSVLTFKYVVHEIVPNRIQYDGWKPGDPDWNMWDPEHTAKGCLHFCEEGFGHAIFY 163 Query: 160 ---------------EAIPILQQHGRISSLGFRF 178 + +H RI S GF F Sbjct: 164 DEVMKCWPLCSNKNMTVVAGGLKH-RIPSFGFVF 196 >gi|167993194|ref|ZP_02574289.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328754|gb|EDZ15518.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248085|emb|CBG25920.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995083|gb|ACY89968.1| putative metal-dependent hydrolase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159509|emb|CBW19028.1| unnamed protein product [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|321225626|gb|EFX50680.1| hypothetical protein SEE_00973 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131304|gb|ADX18734.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 265 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F L + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DSSRIICHPDIAR 95 >gi|303327147|ref|ZP_07357589.1| alkyl sulfatase or beta-lactamase [Desulfovibrio sp. 3_1_syn3] gi|302863135|gb|EFL86067.1| alkyl sulfatase or beta-lactamase [Desulfovibrio sp. 3_1_syn3] Length = 449 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 52 SNTTVIVDTGPDF--YMQVLREQ----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++D G D + LRE + AV+ TH H DH G FL+ +R Sbjct: 75 EHGYILIDAGDDLNGAAEALREIKNLIPGGVQAVILTHSHPDHRGG----AEIFLEGRRD 130 Query: 106 IDVYAAPD 113 + V+ D Sbjct: 131 VPVWGHAD 138 >gi|225619706|ref|YP_002720963.1| putative hydrolase [Brachyspira hyodysenteriae WA1] gi|225214525|gb|ACN83259.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Brachyspira hyodysenteriae WA1] Length = 634 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 29/155 (18%) Query: 52 SNTTVIVDTGPDF-YMQVLREQV----------LSIDAVLYTHPHADHIHGIDGLRGYFL 100 N +IVD G F +L +I ++ TH H DHI I +FL Sbjct: 28 GNEVLIVDCGFMFPRYHMLGIDYVIPDTSYLEDKNIIGLILTHGHEDHIGAI----PHFL 83 Query: 101 KQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYP-------PIVNPIVIENNDVPICM 152 ++ I +Y + + L Y + D + Y + IE V + Sbjct: 84 RKFPDIPIYGSRLTLAFLRAKLNDYKNEYKDTKLYEVEPRNKIQLGMNFDIEFIRVNHSI 143 Query: 153 KSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTD 186 G+ P+ G I G F+ ++ TD Sbjct: 144 PDGVGIAITTPL----GVIIHTGDFKI-DLNPTTD 173 >gi|149001775|ref|ZP_01826748.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] gi|147760233|gb|EDK67222.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] Length = 402 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 21/121 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + AVL TH H DHI GI FL ++ + +YA P + + L++ Sbjct: 64 NIDRVKAVLITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLEE 111 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 I +N + ++A H LG G + D Sbjct: 112 HGLLRNAKLYEINHN-----TELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDF 166 Query: 188 N 188 Sbjct: 167 K 167 >gi|56460647|ref|YP_155928.1| beta-lactamase fold exonuclease [Idiomarina loihiensis L2TR] gi|56179657|gb|AAV82379.1| Predicted exonuclease of the beta-lactamase fold [Idiomarina loihiensis L2TR] Length = 452 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 12/71 (16%) Query: 52 SNTTVIVDTGPD-----FY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +T +++D G Q L + +D V+ TH H DH K+ Sbjct: 22 ESTRILIDCGLFQGYKWLRRRNWQPLPMGINQVDGVVLTHAHLDHSG----FVPVLYKEG 77 Query: 104 RPIDVYAAPDC 114 V+A Sbjct: 78 FRGPVFAHHAT 88 >gi|226295107|gb|EEH50527.1| ribonuclease Z [Paracoccidioides brasiliensis Pb18] Length = 1094 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 104/321 (32%), Gaps = 97/321 (30%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S+ P R+ S ++ S + D G + Sbjct: 704 EIITLGTGSSV----------------PSKYRSVSGTLLTVPS----VGNYLFDCGENTL 743 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG-------------------------- 91 Q+ LR+ + + + +H HADH G Sbjct: 744 GQLQRVFSPQELRKVLQDLKVIWISHLHADHHLGTVSVIRAWYKVVYGTLSSASSPSPEQ 803 Query: 92 -----IDGLRGYFLKQKRPID---VYA-----------APDCMKHLFESFRYCFKALDDR 132 + R + + + I+ YA + +SFR F LD Sbjct: 804 DLTKILSEKRLFVVSHAKMIEWLAEYAGVENFGFDKITPLEVDSSAADSFR--FSHLDQN 861 Query: 133 TYP-------PIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQH---GRISSLGFRFG- 179 + P P+ + + P+ +++A G+ + H + +S F G Sbjct: 862 SRPILNERGNPMKTLLSFNPDQSPLAAQLQAATGLSTLLTTPVMHCNGSKATSFVFPSGL 921 Query: 180 NVAYCTDVNAFPAESLEKL-QNLDFLIIDAL------KNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ + K+ ++ LI +A ++ H + E+L+ +L+ Sbjct: 922 KVSYSGDCR--PSRNFAKIGKDSTVLIHEATFEDDMYQDARAKRHSTSGEALQIAKLMRA 979 Query: 233 KNAILTHMHVDLDYDMVLKST 253 KN +LTH + + Sbjct: 980 KNIVLTHFSQRYTHKPTIPRL 1000 >gi|119476000|ref|ZP_01616352.1| Metallo-beta-lactamase superfamily protein [marine gamma proteobacterium HTCC2143] gi|119450627|gb|EAW31861.1| Metallo-beta-lactamase superfamily protein [marine gamma proteobacterium HTCC2143] Length = 260 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 43 KISRVSERGSNTTVIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + S +VD G + L Q L ++ +L TH H DH GI+ L Sbjct: 14 YIWCIYDDDSGKAAVVDPGEAGPVEEALLAQQLQLETILITHHHFDHTGGIE-----ALT 68 Query: 102 QKRPIDVYAAPD 113 + R I VY + Sbjct: 69 KHRDIPVYGPKN 80 >gi|118586723|ref|ZP_01544160.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] gi|118432811|gb|EAV39540.1| metal-dependent hydrolase, beta-lactamase superfamily [Oenococcus oeni ATCC BAA-1163] Length = 636 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 14/136 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L + + V TH HAD I + +L + + V+ + + Sbjct: 55 PDF--NYLVDHADQVVGVFLTHGHADAIGALP-----YLLEALRVPVFGTEFTLALAKQQ 107 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 D Y I ++E + S I I + ++G+I G F+ Sbjct: 108 VSRRPSLSDFDDYNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFK 167 Query: 178 FGNVA---YCTDVNAF 190 F N A Y TD + Sbjct: 168 FDNTAKGPYKTDYSRL 183 >gi|134113516|ref|XP_774573.1| hypothetical protein CNBF4610 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257215|gb|EAL19926.1| hypothetical protein CNBF4610 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1037 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 89/314 (28%), Gaps = 98/314 (31%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D T LG G+++ P R SS ++ S G +++D G Sbjct: 532 SDDIVVTTLGTGSAI----------------PSKYRNVSSTHLAIPSLGG----ILLDAG 571 Query: 62 PDFYMQV-------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA---- 110 Q+ L+ + + V +H HADH G++ + + +Y Sbjct: 572 EGTLGQLKRRFGEGLKSILEELKMVFVSHMHADHHLGMNAVLEERFRLGINTPLYIIAPY 631 Query: 111 -----APDCM--------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + K L C + L +R V+ +++ + GG Sbjct: 632 LIALNLQETATWQAVGAEKGLKNVRFLCVERLGERM---SVDVTEKDSSQKVEWRQMEGG 688 Query: 158 VIEAIPILQQHG----RISSLGFR-------------------------------FGN-- 180 P + HG +I L R G Sbjct: 689 GKRRWPFVPLHGFSDSKIQRLYLRQLFADMGLTAIYAPSVPHRGRAYGLVLEGAPIGKDG 748 Query: 181 -------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS------SHFSLSESLKKI 227 + Y D + +E + LI +A H + S+++ Sbjct: 749 LKGKGWKIVYSGDTKP-SQKLVEAGKGATLLIHEATLEDDKPEVAAVKGHSTFSQAIDVG 807 Query: 228 ELINPKNAILTHMH 241 + + K +L H Sbjct: 808 KEMRAKYILLNHFS 821 >gi|159036513|ref|YP_001535766.1| ribonuclease Z [Salinispora arenicola CNS-205] gi|189043789|sp|A8M3K2|RNZ_SALAI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|157915348|gb|ABV96775.1| Ribonuclease Z [Salinispora arenicola CNS-205] Length = 309 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 74/245 (30%), Gaps = 57/245 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL------------ 95 R + ++ D G Q+L V + D + TH H DH G+ G Sbjct: 28 RWDDEVILFDPGEGSQRQLLYSSVTATDLTRICVTHFHGDHCLGLPGTIQRLSLDRVPHP 87 Query: 96 ---------RGYFLKQK-------------RPIDV----------YAAPDCMKHLFESFR 123 YF + + PID ++H E++ Sbjct: 88 VAVHFPAGGADYFTRLRYASSFHETAELAVMPIDTDGQQIAVRNGTLEARRLRHPIETYG 147 Query: 124 YCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D R P ++ I V ++ + + + G RF A Sbjct: 148 YRLVEPDGCRMLPERLSAHGIAGPAVGELLRVGHLDVNGRRVTRAEVSAPRPGQRF---A 204 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 + D ++ D L+I++ ++ H + +++ + + + Sbjct: 205 FVMDT-GLCDAVYALAEHADLLVIESTFLASETALAAEVGHLTAAQAARVATESGVRRLV 263 Query: 237 LTHMH 241 LTH Sbjct: 264 LTHFS 268 >gi|242797026|ref|XP_002482927.1| metallo-beta-lactamase domain protein, putative [Talaromyces stipitatus ATCC 10500] gi|218719515|gb|EED18935.1| metallo-beta-lactamase domain protein, putative [Talaromyces stipitatus ATCC 10500] Length = 319 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +I+DTG D Q L +S+ VL TH H DH G+ L + Sbjct: 68 GPERLIIDTGQGIPDWADLIEQTLTNNGISLSHVLLTHWHGDHTGGVPDLIRMYPNLASS 127 Query: 106 IDVYAAPDCMKHLFESFRYCFK 127 I + + + + FK Sbjct: 128 IYKHTPSKTQQPITD--GQIFK 147 >gi|110834083|ref|YP_692942.1| metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] gi|110647194|emb|CAL16670.1| Metallo-beta-lactamase family protein [Alcanivorax borkumensis SK2] Length = 257 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 53 NTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + V+VD G + + LRE LS+ A+L TH H DH+ G+ L + R I VY Sbjct: 23 DQCVVVDPGDAEPVERYLRENGLSLSALLITHHHPDHVGGV-----AALTKHRDIPVYGP 77 Query: 112 PD 113 Sbjct: 78 AK 79 >gi|83032629|ref|XP_729122.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23486012|gb|EAA20687.1| unknown protein [Plasmodium yoelii yoelii] Length = 814 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 84/265 (31%), Gaps = 79/265 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 F LG G S +P S I + + +VI+D G Sbjct: 578 SFYFLGTGCS--IPSAF---------------RNVSGIILNIQKD---FSVILDFGEGSL 617 Query: 66 MQV---------LREQVLSIDA----------------VLYTHPHADHIHGIDGLRGYFL 100 Q+ E + SI + +H HADH GI YFL Sbjct: 618 YQLYWISKSWIQFTESIKSIKYNTYSYFVIIILIFYRVIFISHAHADHHVGIY----YFL 673 Query: 101 KQKRPI------DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI-CMK 153 ++ I + P +K F F ++ R I+ ND+ I + Sbjct: 674 YIRKMIFPNLDPPLILIPKTLKSWMNLFNELFLDIEMR--------IIYNENDLEIKEII 725 Query: 154 SAGGVIEAIPILQQHGRISSLGFR-----FGNVAYCTDVNAFP-AESLEKLQNLDFLIID 207 S + H + S G + G++ Y D P ++ + LI + Sbjct: 726 SEDNFLTLHLFKVNHIK-ESYGIKIESKDIGSIVYSADTR--PCDNVKRFAKDCNILIHE 782 Query: 208 A------LKNGLHSSHFSLSESLKK 226 A L ++ H ++ E+++ Sbjct: 783 ATFDDELLVEAINKKHSTIHEAMQI 807 >gi|295676626|ref|YP_003605150.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1002] gi|295436469|gb|ADG15639.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1002] Length = 454 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 28/145 (19%) Query: 52 SNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++D G + ++ L SIDAV+ TH H DH + Sbjct: 22 PGLRILIDCGLFQGLKNLRLRNWAALPVPADSIDAVILTHAHLDHSG----YLPLLARNG 77 Query: 104 RPIDVYAAPDCM----------KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 VY P L E + P + ++ + + Sbjct: 78 FRGPVYCTPGTASLCDIMLRDSAKLQEEEAEFANRHGFSKHRPALPLYTQDDAQRALHLL 137 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF 178 + P+ HG L FRF Sbjct: 138 APRRF--DTPVDLPHG----LCFRF 156 >gi|256830142|ref|YP_003158870.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] gi|256579318|gb|ACU90454.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM 4028] Length = 550 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 46/154 (29%), Gaps = 33/154 (21%) Query: 52 SNTTVIVDTGPDF-------------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++VD G F M + + + ++ TH H DHI + L Y Sbjct: 27 EQSMILVDCGLMFPDVILYGVDVVIPRMDFIVSRKHKLKGIILTHGHEDHIGALAWLVPY 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + +Y + ++ + L +R V + + + G Sbjct: 87 L----QEVPLYGSEFTLRLAMKR-------LQERNLDSHVKLHPVRARE-----RVELGE 130 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + H I G G + + D Sbjct: 131 FAVTFMPVCHSIIEGFGLGIETPAGRIVHTGDFK 164 >gi|284992328|ref|YP_003410882.1| beta-lactamase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284065573|gb|ADB76511.1| beta-lactamase domain protein [Geodermatophilus obscurus DSM 43160] Length = 566 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 28/175 (16%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +++D G PDF ++ ++ + AV+ TH H DHI I Sbjct: 44 DGKLLVIDCGVLFPEAEQPGVDLILPDF--GIIEHRLDDVVAVVLTHGHEDHIGAI---- 97 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+ + I + + + + R + + + I + + Sbjct: 98 PYLLRMRGDIPLVGSRFTLALVKAKLREHRLDPVLVEVAAGDDHLAGPFHCEFISVNHSI 157 Query: 157 GVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKLQNLDFLIID 207 A+ + G + G F+ + TD+ AF + L+ +D L+ D Sbjct: 158 PDALAVAVHTPAGVLVHTGDFKMDQLPLDGVLTDLGAF---ARLGLEGIDLLLAD 209 >gi|261407922|ref|YP_003244163.1| beta-lactamase domain-containing protein [Paenibacillus sp. Y412MC10] gi|329929303|ref|ZP_08283056.1| ribonuclease J 1 [Paenibacillus sp. HGF5] gi|261284385|gb|ACX66356.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10] gi|328936672|gb|EGG33115.1| ribonuclease J 1 [Paenibacillus sp. HGF5] Length = 559 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 48/154 (31%), Gaps = 33/154 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V+VD G F + L E + +L TH H DHI G+ Y Sbjct: 31 AGDIVVVDAGLKFPEEDMLGIDIVIPDISYLTENRDKVRGILLTHGHEDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK + VY + + L + I+I + G Sbjct: 87 VLKHLN-VPVYGTKLTLGLVENK-------LREANLLGETKRILIHADSE----VQLGNT 134 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 ++A H S+G GNV + D Sbjct: 135 LKATFFKTNHSIPDSVGICIETPEGNVVHTGDFK 168 >gi|169838044|ref|ZP_02871232.1| metallo-beta-lactamase family protein, putative [candidate division TM7 single-cell isolate TM7a] Length = 486 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 14/101 (13%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E+ I V++TH H DHI L + P VYA+ + L + Sbjct: 148 LLERKHMIRGVVFTHGHLDHIGAFRHLIP-----QIPAPVYASKFTIGMLKRTM-----E 197 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 D Y P + E ++ G + H Sbjct: 198 ESDSGYKPDYYELNPEAHE----RAQIGDSFNIELVRVNHS 234 >gi|162447690|ref|YP_001620822.1| metallo-beta-lactamase family protein [Acholeplasma laidlawii PG-8A] gi|161985797|gb|ABX81446.1| metallo-beta-lactamase family protein [Acholeplasma laidlawii PG-8A] Length = 562 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 20/118 (16%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 + + +H H DHI + + ++ + +YA P M+ + +S + + Sbjct: 60 DRVKGIFLSHAHEDHIGALPHIL-----KELNVPIYATPFTMEVVKDSLK------EKNF 108 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 + I+ N + G ++ H S+G G + Y +D Sbjct: 109 DLNQLTLNTIDQNSI-----IRIGNVKITFFSTTHSIPESVGIALHTVDGVIVYTSDF 161 >gi|284161444|ref|YP_003400067.1| beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011441|gb|ADB57394.1| beta-lactamase domain protein [Archaeoglobus profundus DSM 5631] Length = 239 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 23/201 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK- 103 S + G NT + VD G + R +DAVL TH H+DH + L Sbjct: 17 SCIVLEGENTKIAVDIGAG---SIARLDFD-LDAVLITHNHSDHNSDLIPLLKARWLLGY 72 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +D+Y L + +Y + + + ++ G + Sbjct: 73 EKLDIYGVRGTKAFLESAL---------ESYAYLRRKLKFDVHE---TRSFKVGEFDVKA 120 Query: 164 ILQQHGRISSLGFRF--GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFS 219 I +H I S + GNV + +P E + ++ D LI + + + H + Sbjct: 121 IPTKHS-IESQAYVVSDGNVTIVVSGDTYPIEDVLSVE-CDLLIHEMSLPFGYETNDHTT 178 Query: 220 LSESLKKIELINPKNAILTHM 240 +++ K + HM Sbjct: 179 PESFADLLDVCKAKKIVFVHM 199 >gi|312116317|ref|YP_004013913.1| RNA-metabolising metallo-beta-lactamase [Rhodomicrobium vannielii ATCC 17100] gi|311221446|gb|ADP72814.1| RNA-metabolising metallo-beta-lactamase [Rhodomicrobium vannielii ATCC 17100] Length = 562 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 39/191 (20%) Query: 42 LKISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHA 86 + + + +++D G PD + ++ +L TH H Sbjct: 27 VYLYGIGPEDDRQWLMIDCGITFPDDSEPGVDVVLPDLR--FIENDRQNLAGILITHAHE 84 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DHI + + K + VY L + + PIV Sbjct: 85 DHIGAVAEMWP-----KLRVPVYVTKFAAHLLRSK----LQEHSHGSEVPIVEMAQGARF 135 Query: 147 DVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFGNV-AYCTDVNAFPAESLEKL 198 ++ V +IP I G + G ++F + AY D + +L Sbjct: 136 NIGRFDVDLVTVAHSIPECNSVFIRTPAGNVLHTGDWKFDDTPAY-GDPSD--EAKFARL 192 Query: 199 --QNLDFLIID 207 + + LI D Sbjct: 193 GDEGVRALICD 203 >gi|190345216|gb|EDK37067.2| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC 6260] Length = 736 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 43/133 (32%), Gaps = 34/133 (25%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFL-----------KQKRPIDVYAAPDCMKHLFESFR 123 SI TH HADH GI Y + R I +YA+ + L F Sbjct: 255 SISQYFLTHFHADHYGGITKKWSYNRVFSSLEEYEDETKFRRI-IYASEVTSRLLTLRFG 313 Query: 124 --------------YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 YC K DD P ++ D + + PI H Sbjct: 314 IDPRFIKDLKFDTRYCVKFYDDSGSP-------VDVQDGGYESNDSVPGLYVTPITANHC 366 Query: 170 RISSLGFRFGNVA 182 +++ F F +++ Sbjct: 367 PGAAI-FLFESIS 378 >gi|145340799|ref|XP_001415505.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144575728|gb|ABO93797.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 780 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 96/324 (29%), Gaps = 82/324 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKIS---RVSERGSNTTVIVDTGP 62 LG G P R S + V+ + S T +++D G Sbjct: 447 EVIFLGTG----------------SAEPNKYRGSSGILTELPRSVAAKTSKTWMMLDCGE 490 Query: 63 D--------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL---------RGYFLKQKRP 105 F ++ V ++ V +H HADH+ G+ GL L R Sbjct: 491 GTVGSIQRMFGCATMKRIVKNLKVVWISHHHADHMLGVRGLLEVHARVCNAPLTLVGPRV 550 Query: 106 IDVYA-----APDCMKHLFES--FRYCFKAL------------------------DDRTY 134 ++ + + + + F F L + Sbjct: 551 LEEWLHTCGVSQNLYHFVHSRDLFAGPFGRLPPPPPPTKLQSVSRSPLPPPPPLDEGNQR 610 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNA 189 I + + + G+ + +H R + G+ +AY D Sbjct: 611 HSIFDQSNASAKSMESRLMQLCGLSRFEAVAVEHCR-DAAALVVGSPSGWSLAYSGDCR- 668 Query: 190 FPAESLEK-LQNLDFLIIDALKNGLHSSHF------SLSESLKKIELINPKNAILTHMHV 242 P+ + + +I +A + S H + +E+L+ K+ +LTH Sbjct: 669 -PSRGFARAAKGCALMIHEATFDNELSDHAVRKRHSTTAEALQIAADAGVKHIVLTHFSQ 727 Query: 243 DLDYDMVLKSTPSRVVPAFDGMQF 266 + L + + AFDG + Sbjct: 728 RYPKAIYLDEVKIKPIIAFDGFRL 751 >gi|145497523|ref|XP_001434750.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401878|emb|CAK67353.1| unnamed protein product [Paramecium tetraurelia] Length = 869 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 34/167 (20%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI 76 GV + G +PK +S I V+ RG ++VD P + + + SI Sbjct: 349 GVTILGCSHG----FDPK---GSTSGYIFWVNGRG----IMVDPPPFASYHMKQMGIPSI 397 Query: 77 --DAVLYTHPHADHIHG-----IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 AV+ +H HADH G +D R + + + SF + A+ Sbjct: 398 LICAVIISHCHADHDAGTFHKILDDTRVEII-------------TTRTIMNSFLRKYSAM 444 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF 176 + + + + I + G H I SLGF Sbjct: 445 SNIDIDSLRKLFIFRPAIIGIPLNIYGAYFNF--FYAMH-TIPSLGF 488 >gi|332162779|ref|YP_004299356.1| putative hydroxyacylglutathione hydrolase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606885|emb|CBY28383.1| hydroxyacylglutathione hydrolase [Yersinia enterocolitica subsp. palearctica Y11] gi|325667009|gb|ADZ43653.1| putative hydroxyacylglutathione hydrolase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863687|emb|CBX73791.1| hydroxyacylglutathione hydrolase [Yersinia enterocolitica W22703] Length = 251 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 VIVD G + VL + A+L TH H DH+ G+ L + I V Sbjct: 19 DEQKHCVIVDPGESAPVLAVLSQGQYLPQAILLTHHHNDHVGGVADL----HRHFPEIPV 74 Query: 109 YAAPDCMK 116 Y + Sbjct: 75 YGPQETAN 82 >gi|317471916|ref|ZP_07931251.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316900689|gb|EFV22668.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 169 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Query: 53 NTTVIVDTG---PDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 T ++VD G + L + + +L TH H+DHI G+ + ++ + Sbjct: 21 ETKLLVDCGISAKRIEKSLDELDTRASELSGILITHEHSDHIKGLG-----VMLRRYGLP 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 V+A + + +S RY K +D + PI + +D+ + Sbjct: 76 VFATAKTIDAVLDS-RYIGK-VDKDLFHPIEADHPFQLDDITVE 117 >gi|313638629|gb|EFS03759.1| putative secreted lipoprotein [Listeria seeligeri FSL S4-171] Length = 187 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L +V ID +L THPHADHI D + Sbjct: 51 STLIQSEDGTTILIDTGRQDDDRILTDLKEAKVEKIDLLLLTHPHADHIGNADKIIA 107 >gi|313634046|gb|EFS00728.1| late competence protein [Listeria seeligeri FSL N1-067] Length = 376 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L +V ID +L THPHADHI D + Sbjct: 51 STLIQSEDGTTILIDTGRQDDDRILTDLKEAKVEKIDLLLLTHPHADHIGNADKIIA 107 >gi|269793946|ref|YP_003313401.1| putative metallo-beta-lactamase superfamily hydrolase [Sanguibacter keddieii DSM 10542] gi|269096131|gb|ACZ20567.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Sanguibacter keddieii DSM 10542] Length = 556 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 44/197 (22%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ + A++ TH H DHI G+ Y LK++ I V + + + + Sbjct: 65 IRDRLKDVVAIVLTHGHEDHIGGV----PYLLKERADIPVIGSKLTLAFISAKLK----- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 + P IE V S G + I H +L R G V Sbjct: 116 ------EHRIRPRTIE---VEAGGSSKQGPFDLEFIAVNHSIPDALAVAIRTRAGLVINT 166 Query: 185 TDVN--AFPAES-------LEKL--QNLDFLIIDALKNGLHSSHFSLSE-----SLKKIE 228 D FP +S +L + +D + D+ + F++SE +++++ Sbjct: 167 GDFKMDQFPLDSRITDLNHFARLGEEGVDLFMTDSTNAEVPG--FTMSEQDLVPAIEQVF 224 Query: 229 LINPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 225 RTAPRRVIVSSFASHVH 241 >gi|163790852|ref|ZP_02185277.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] gi|159873920|gb|EDP67999.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] Length = 559 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 24/146 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E + V TH H D I + + QK + V+ + L + Sbjct: 50 PDF--SYLEENRNRVTGVFLTHGHEDAIGALP-----YFLQKFDVPVFGTELTIA-LAKL 101 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 F D + +I+ N + G + A H S+G Sbjct: 102 F-----VEKDSQTSTFDDYHIIDEN-----TEIEFGDVIASFFRTTHTIPDSVGIALKTT 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQNLDF 203 G++ Y D +S + + + Sbjct: 152 EGSIVYTGDFKF--DQSAKPMYQSNL 175 >gi|325135280|gb|EGC57901.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M0579] gi|325143606|gb|EGC65926.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M01-240013] gi|325201314|gb|ADY96768.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M01-240149] gi|325208900|gb|ADZ04352.1| metallo-beta-lactamase domain protein [Neisseria meningitidis NZ-05/33] Length = 210 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNHWLEEGETLKVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|289450017|ref|YP_003475209.1| DNA internalization competence protein ComEC/Rec2-like protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184564|gb|ADC90989.1| DNA internalization competence protein ComEC/Rec2-like protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 932 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 9/55 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I G V + +Q L + +DA + TH HADH G L Sbjct: 692 SIAIDSGRPEGGKDMVKI-------LQAL--GIRKLDAFILTHEHADHFGGALEL 737 >gi|288561506|ref|YP_003428912.1| metallo beta lactamase SLH domain-containing protein [Bacillus pseudofirmus OF4] gi|288548138|gb|ADC52020.1| metallo beta lactamase SLH domain [Bacillus pseudofirmus OF4] Length = 543 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHG 91 + T+++D G Q + + + +ID ++ TH HADH+ G Sbjct: 230 NGKTILIDAGTQTAGQQVVSYLKQAGITTIDHLIITHAHADHVGG 274 >gi|282876029|ref|ZP_06284896.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] gi|281295054|gb|EFA87581.1| metallo-beta-lactamase domain protein [Staphylococcus epidermidis SK135] Length = 161 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D + Q + +++ I+ A+L TH H DHI +D + +K Sbjct: 19 ENEENVILIDPSSE--SQKIIKKLNQINKPLKAILLTHAHYDHIGALD-----NIIEKYQ 71 Query: 106 IDVYAAPDCMKHLFE 120 + VY + D L + Sbjct: 72 VPVYMSKDEFDFLTD 86 >gi|329934618|ref|ZP_08284659.1| integral membrane protein [Streptomyces griseoaurantiacus M045] gi|329305440|gb|EGG49296.1| integral membrane protein [Streptomyces griseoaurantiacus M045] Length = 856 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G +++D GPD + LR + + V+ TH HADH+ G+ Sbjct: 623 GEGAGIVIDAGPDPALVDRCLRALGISRVPLVVLTHFHADHVAGL 667 >gi|302336596|ref|YP_003801802.1| metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Spirochaeta smaragdinae DSM 11293] gi|301633781|gb|ADK79208.1| metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Spirochaeta smaragdinae DSM 11293] Length = 289 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 27/132 (20%) Query: 55 TVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++D G + M++L SID ++ TH H DH G+ + KR + V Sbjct: 43 NILMDVGQNPKALLTNMELLNISPGSIDMIVLTHCHYDHTQGLVEIIKAT--GKRNLPVV 100 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG-------VIEAI 162 A PD F+ P + I + D ++ AGG +E + Sbjct: 101 AHPD-----------LFRVHVITD--PFLRYIGVPGEDQNKVVEEAGGVLCLVSDPLELL 147 Query: 163 PILQQHGRISSL 174 P L G I L Sbjct: 148 PGLMTSGEIQML 159 >gi|224540921|ref|ZP_03681460.1| hypothetical protein CATMIT_00072 [Catenibacterium mitsuokai DSM 15897] gi|224526154|gb|EEF95259.1| hypothetical protein CATMIT_00072 [Catenibacterium mitsuokai DSM 15897] Length = 581 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 24/148 (16%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++ +I+D G F + LR+ I + TH H DHI GI Sbjct: 52 ECNDEMIIIDAGVKFASEGLPGIDYVIPDYTYLRKNNKKIKGLFITHGHEDHIGGIP--- 108 Query: 97 GYFLKQKRPID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 FL + I +YA+P + + PI + I+ I + Sbjct: 109 --FLLRLVNIPFIYASPLACAMIRRKLEEHHLTHVTKM-IPITHESSIKTKYFNIGFFNT 165 Query: 156 GGVIE---AIPILQQHGRISSLG-FRFG 179 I I + GRI G F+F Sbjct: 166 NHSIPESMGIIVNTPDGRIIETGDFKFD 193 >gi|85058567|ref|YP_454269.1| putative hydroxyacylglutathione hydrolase [Sodalis glossinidius str. 'morsitans'] gi|123519977|sp|Q2NVG1|GLO2_SODGM RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|84779087|dbj|BAE73864.1| putative hydroxyacylglutathione hydrolase [Sodalis glossinidius str. 'morsitans'] Length = 250 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Query: 49 ERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++VD G +Q L + L+ AVL TH H DH+ G+ L Q P+ Sbjct: 18 HNDDRRCLVVDPGDATPVLQALADHRLTPVAVLLTHHHQDHVGGVSELL-----QHFPVP 72 Query: 108 VYAAPDC 114 VY + Sbjct: 73 VYGPEET 79 >gi|291562489|emb|CBL41305.1| Zn-dependent hydrolases, including glyoxylases [butyrate-producing bacterium SS3/4] Length = 308 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 55/230 (23%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V+ D G + + + + +DAVL +H H DHI G+ + K+ Sbjct: 22 GEKNVLFDAGMAYSADKMIKNIKRELGDRPLDAVLLSHSHYDHISGV----PFLRKEWPD 77 Query: 106 IDVYAAPD------------CMKHLFESFRY---CFKALDDRTYPPIVNPIVIENNDVPI 150 + VY + M+ L ++ KA D R +V+ +V E + + Sbjct: 78 LVVYGSAYAKKILEKPSAKKTMRELSDAAAQGVGLTKAPDYRDEDLMVDKVVKEEDILDF 137 Query: 151 ------CMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 ++ G ++ + H I F V T P + +LD Sbjct: 138 GGHKITVFETPGHTKCSLSYMVDHDVI----FASETVGVTTSEVYMPCYLVGYQMSLD-- 191 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP 254 +++K+ K +TH+ + D P Sbjct: 192 ------------------AVEKLRHAGAKRIFITHVGILTPEDAGTALLP 223 >gi|253577680|ref|ZP_04854986.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842922|gb|EES70964.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 246 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPID 107 + T+++D G + + + V IDAVL TH H DH+ G++ L R F ++PI Sbjct: 29 GDFTLLIDCGITAPLALHTIGKSVEEIDAVLITHIHGDHVGGLEELAFRRKFGSGRKPI- 87 Query: 108 VYAAPDCMKHLFE 120 +Y A + ++ L+E Sbjct: 88 LYIAENLVEPLWE 100 >gi|227529057|ref|ZP_03959106.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus vaginalis ATCC 49540] gi|227351069|gb|EEJ41360.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus vaginalis ATCC 49540] Length = 597 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+++ I V TH HAD I + + + V+ + + + + + Sbjct: 55 LKKRKNDIVGVFLTHGHADAIGALP-----YFLMDFDVPVFGSEMTIALAKLAVKGHKEV 109 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + + I I + G I G F+F A Sbjct: 110 KKFNDFHVVDESTAIDFNDVTVSFFATTHTIPETLGIVLETSEGNIVYTGDFKFDQTAST 169 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 170 GYQTDLARLAE 180 >gi|227544999|ref|ZP_03975048.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri CF48-3A] gi|300909966|ref|ZP_07127426.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] gi|227185016|gb|EEI65087.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus reuteri CF48-3A] gi|300892614|gb|EFK85974.1| metallo-beta-lactamase superfamily protein [Lactobacillus reuteri SD2112] Length = 593 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE I V TH HAD I + YFL + V+ + + + + + Sbjct: 56 LREHKNKIVGVFLTHGHADSIGAL----PYFLMDFN-VPVFGSEMTIALAKLAVKNHKEV 110 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA-- 182 + + I+ NDV + I + + + G I G F+F A Sbjct: 111 KKFNDFHVVDASTAIDFNDVTVSFFQTTHTIPETLGVVLETKAGNIVYTGDFKFDQTAKK 170 Query: 183 -YCTDVNAFPA 192 Y TD+ Sbjct: 171 GYQTDLARLAE 181 >gi|317480710|ref|ZP_07939796.1| ribonuclease Z [Bacteroides sp. 4_1_36] gi|316903051|gb|EFV24919.1| ribonuclease Z [Bacteroides sp. 4_1_36] Length = 304 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 97/321 (30%), Gaps = 95/321 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFPTSQIVNV-----RDKLFMIDCGE 40 Query: 63 DFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL 118 +Q + + ++ + +H H DH G+ GL L + + ++ +P ++ L Sbjct: 41 GAQLQFRKSHLKFSRLNHIFISHLHGDHCFGLLGLISTLNLLGRTAELHIH-SPKGLETL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 F V + + + + + IP+ R+ GF Sbjct: 100 LTPMLDFFNRQMTYK----VLFHEFDTKEPMLIYEDRSLTVTTIPLRH---RMPCCGFLF 152 Query: 177 -------------------------RFGNVA-YCT------------------------- 185 R N A Y T Sbjct: 153 AEKRRPNHIIREMVDFYQVPVYELNRIKNGADYVTPEGKTVSNNLLTRPSAPSRSYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 D P +E+++ +D L DA + + H + +++ + K ++ Sbjct: 213 DTIYLP-SIVEQIKGVDLLFHEATFANEDAPRAKE-TFHTTAAQAAEIARRAEVKKLLIG 270 Query: 239 HMHVDLDYDMVLKSTPSRVVP 259 H + + VL S + P Sbjct: 271 HFSARYEDENVLLQEASAIFP 291 >gi|290890823|ref|ZP_06553890.1| hypothetical protein AWRIB429_1280 [Oenococcus oeni AWRIB429] gi|290479595|gb|EFD88252.1| hypothetical protein AWRIB429_1280 [Oenococcus oeni AWRIB429] Length = 633 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 14/136 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L + + V TH HAD I + L + V+ + + Sbjct: 52 PDF--NYLVDHADQVVGVFLTHGHADAIGALPYLLEVL-----RVPVFGTEFTLALAKQQ 104 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 D Y I ++E + S I I + ++G+I G F+ Sbjct: 105 VSRRPSLSDFDDYNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFK 164 Query: 178 FGNVA---YCTDVNAF 190 F N A Y TD + Sbjct: 165 FDNTAKGPYKTDYSRL 180 >gi|116491276|ref|YP_810820.1| metallo-beta-lactamase superfamily hydrolase [Oenococcus oeni PSU-1] gi|116092001|gb|ABJ57155.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Oenococcus oeni PSU-1] Length = 636 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 14/136 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L + + V TH HAD I + L + V+ + + Sbjct: 55 PDF--NYLVDHADQVVGVFLTHGHADAIGALPYLLEVL-----RVPVFGTEFTLALAKQQ 107 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI---EAIPILQQHGRISSLG-FR 177 D Y I ++E + S I I + ++G+I G F+ Sbjct: 108 VSRRPSLSDFDDYNVITPDSIVEFGKTKVSFFSTTHSIPESVGIVLETEYGQIVYTGDFK 167 Query: 178 FGNVA---YCTDVNAF 190 F N A Y TD + Sbjct: 168 FDNTAKGPYKTDYSRL 183 >gi|325479539|gb|EGC82635.1| metallo-beta-lactamase domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 200 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 18/144 (12%) Query: 46 RVSERGSNTTVIVDTG-PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V +N +VD P Q + + + I+ ++ TH H DH+ G++ + K Sbjct: 16 YVVSDENNEGFLVDCAYPSERVKQYIEDNNIKINFIIQTHTHFDHVLGLE-----YFKNL 70 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++VYA+ D K + Y D P I+N + S + Sbjct: 71 YDVNVYASED-SKEIANDKDYNLAYSYDVNVP-------IDNYLKDGEVFS---KYNILA 119 Query: 164 ILQQHGRISSLGFRFGNVAYCTDV 187 I + S+ ++ +V + D Sbjct: 120 IKTPGHTLDSMSYKVDDVLFSGDT 143 >gi|307105702|gb|EFN53950.1| hypothetical protein CHLNCDRAFT_58404 [Chlorella variabilis] Length = 668 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 9/81 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL------- 100 R +VD G Q+ R +I V TH H DH G+ G+ Sbjct: 239 RFDEDIYLVDCGEGTRNQLRRGGFDPAAIRRVFVTHMHGDHCFGVGGVIKAVCEARLGGP 298 Query: 101 KQKRPIDVYAAPDCMKHLFES 121 Q P+ +Y P+ + + Sbjct: 299 MQHEPLLIYGPPELQSQVLAT 319 >gi|224025848|ref|ZP_03644214.1| hypothetical protein BACCOPRO_02590 [Bacteroides coprophilus DSM 18228] gi|224019084|gb|EEF77082.1| hypothetical protein BACCOPRO_02590 [Bacteroides coprophilus DSM 18228] Length = 271 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 84/264 (31%), Gaps = 65/264 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G + V R A R+S T++VD G Sbjct: 7 ELIMLGTGNAA-VTRCYNTCFA----------LRTS-----------QGTLLVDAGGGNG 44 Query: 64 FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +Q+ + + I + TH H DHI G + R I + + +F Sbjct: 45 ILIQLEKAGIAISDIHNLFVTHAHTDHILG-------VIWIIRTIAQHMQQGKYEGIFRV 97 Query: 122 FRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 + + C L + + I++ +++AG ++ + Sbjct: 98 YAHDKAIQVIDWICRMTLPGKIVACLGERILLCEVKDGDALEAAGMKLQC--FDILSTKE 155 Query: 172 SSLGFRFGNVAYCTDVNAFP--------AESLEKLQNLDFLIIDAL-------KNGLHSS 216 GFR A D + ++ D+L+ +A + + Sbjct: 156 KQFGFR----AILPDHQILTCLGDEPYNETNRNYVEGADWLLCEAFCLYEDRERFKPYEK 211 Query: 217 HFSLS-ESLKKIELINPKNAILTH 239 H S + ++ + +N K+ +L H Sbjct: 212 HHSTALDTGRLAAQLNVKHLLLYH 235 >gi|254524923|ref|ZP_05136978.1| beta-lactamase domain protein [Stenotrophomonas sp. SKA14] gi|219722514|gb|EED41039.1| beta-lactamase domain protein [Stenotrophomonas sp. SKA14] Length = 234 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 12/193 (6%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK---QK 103 V ER + +D G + A+ TH H DH+ G + L ++ Sbjct: 3 VIERDGRPWLTIDCGGEGLTAFKAHYGHLPQALFVTHVHLDHVAGFERLFVDTFFSAQRR 62 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y + L + + + V G +E P Sbjct: 63 GKVRLYVPATVVPLLHKRIG---DYPNVLAEGGANFWDAFQLIVVGEAFWHEGVRLEVFP 119 Query: 164 ILQQHGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGL-HSSHFSL 220 + H ++ G R G + + D P + + + D L H+ L Sbjct: 120 VR-HHWPETAYGLRLQGALTWSGDTRPIPEMLARYANDNELIAHDCGLHGNPSHTGVADL 178 Query: 221 SESLKKIELINPK 233 + + + Sbjct: 179 ER--EYSAELQAR 189 >gi|222056734|ref|YP_002539096.1| ribonuclease Z [Geobacter sp. FRC-32] gi|221566023|gb|ACM21995.1| ribonuclease Z [Geobacter sp. FRC-32] Length = 345 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 L I + ER ++ D G + ++L + + +H H DH G D L Sbjct: 17 PGLYIDFLFER---RAILFDLGD--LSNLSARKLLRVSHIFVSHTHVDHFIGFDQLVRTC 71 Query: 100 LKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIE 144 L + + I +Y ++ + Y + +++ YP + +E Sbjct: 72 LGRDKRIRLYGPSGFVEQIEHRLAGYTWNLVEN--YPTDFTVVAVE 115 >gi|45358257|ref|NP_987814.1| beta-lactamase-like protein [Methanococcus maripaludis S2] gi|44921014|emb|CAF30250.1| Beta-lactamase-like:KH domain [Methanococcus maripaludis S2] Length = 635 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 37/201 (18%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYT 82 R+S + + + + ++VD G + ++ + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPI 141 H H DH + VY + Y + P + Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKNVPY-SSK 295 Query: 142 VIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTDV--- 187 I+N G + P ++ H LG NVAY D+ Sbjct: 296 DIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAYTGDIKFE 355 Query: 188 -NAFPAESLEKLQNLDFLIID 207 + ++ + L+ LII+ Sbjct: 356 ASRLLEPAVCQFPRLETLIIE 376 >gi|329116843|ref|ZP_08245560.1| ribonuclease J 1 [Streptococcus parauberis NCFD 2020] gi|326907248|gb|EGE54162.1| ribonuclease J 1 [Streptococcus parauberis NCFD 2020] Length = 560 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 24/152 (15%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F + L + + + A++ TH H DHI GI FL + Sbjct: 36 IIVDAGIKFPEEDLLGIDYVIPDYSYIVDNLDRVKALVITHGHEDHIGGIP-----FLLK 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + D Y I + + ++ + I Sbjct: 91 QANVPIYAGPLALALIRGKLEEHGLLRDTTLYE-INHNTELTFKNLSVTFFRTTHSIPEP 149 Query: 163 PILQQH---GRISSLG-FRFGNVAYCTDVNAF 190 + H G++ G F+F + D Sbjct: 150 LGIVIHTPQGKVVCTGDFKF-DFTPVGDPADI 180 >gi|315641416|ref|ZP_07896490.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] gi|315482852|gb|EFU73374.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus DSM 15952] Length = 567 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 34/160 (21%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGI 92 + + +++D G F L + + + + TH H DHI GI Sbjct: 25 CYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSYIIQNLHKVKGLFITHGHEDHIGGI 84 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 FL ++ + +YA P M + L++ I + + Sbjct: 85 P-----FLLRQANMPIYAGPLAMALITNK-------LEEHGLLRDAELHEIHEDTIVRFR 132 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 K+A H +LG GN+ D Sbjct: 133 KTA-----VSFFRTTHSIPDTLGVVVKTPSGNIVATGDFK 167 >gi|307291168|ref|ZP_07571053.1| hypothetical protein HMPREF9509_01475 [Enterococcus faecalis TX0411] gi|306497822|gb|EFM67354.1| hypothetical protein HMPREF9509_01475 [Enterococcus faecalis TX0411] Length = 562 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + TH HAD I + +L K + V+ ++ Sbjct: 50 PDF--TYLEENSERIAGIFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 101 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 151 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 152 EGNIVYTGDFK-FDQSAIEMYQ 172 >gi|229546137|ref|ZP_04434862.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX1322] gi|256852833|ref|ZP_05558203.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|229308661|gb|EEN74648.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX1322] gi|256711292|gb|EEU26330.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|315029170|gb|EFT41102.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 565 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 43/142 (30%), Gaps = 23/142 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I + TH HAD I + +L K + V+ ++ Sbjct: 53 PDF--TYLEENSERIAGIFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK-- 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 + VI+ + + G H S+G Sbjct: 104 ----LSVNSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTK 154 Query: 179 -GNVAYCTDVNAFPAESLEKLQ 199 GN+ Y D F ++E Q Sbjct: 155 EGNIVYTGDFK-FDQSAIEMYQ 175 >gi|183232531|ref|XP_655252.2| metallo-beta-lactamase domain-containing protein [Entamoeba histolytica HM-1:IMSS] gi|169801990|gb|EAL49865.2| metallo-beta-lactamase domain-containing protein [Entamoeba histolytica HM-1:IMSS] Length = 643 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 98/279 (35%), Gaps = 42/279 (15%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + + G G + VP +N +S R + TT+++D G Sbjct: 363 NKFQVILFGTGGA--VP-----------GKARN--------VSGEIIRFNKTTIMIDCGE 401 Query: 63 DFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 QV+ + I+ + TH H DHI GI + +P+ + K Sbjct: 402 CIAYQVVNSGIHPDDINILYVTHNHGDHIFGI---MSLLKMRTKPLTIIGPRSMEKGFNL 458 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG- 179 ++ ++ + V N + I I + H + + G RF Sbjct: 459 LCQHYHIKINFINNNIFSDDCVDRNKESIIQNIETKIGARIITVKLNH-QAENYGIRFEI 517 Query: 180 ---NVAYCTDVNAFP-AESLEKLQNLDFLIIDALKNG------LHSSHFSLSESLKKIEL 229 +V + D P + N D++I + ++ +H + S+ ++ Sbjct: 518 NGTSVVFTGDT--LPCLNDKKLCMNADYVIHECNFEDGMEGEAINRTHSTPSQIEAMLKD 575 Query: 230 INPKNAILTHMHV--DLDYDMVLKSTPSRVVPAFDGMQF 266 N K IL H+ D++ K ++ +FDGM F Sbjct: 576 CNNKVIILNHIGQRTSKFADIMKKEYLIPMIYSFDGMVF 614 >gi|59710760|ref|YP_203536.1| right junction gene, LPS locus [Vibrio fischeri ES114] gi|59478861|gb|AAW84648.1| right junction gene, LPS locus [Vibrio fischeri ES114] Length = 490 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 15/82 (18%) Query: 46 RVSERGSNTTVIVDTGP-----------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R++ G+N +++D G + + + I A++ TH H DHI + Sbjct: 35 RINHNGNNHGILIDCGLFQGRDAKDKNGNERKLDIEFPIAHIKALILTHTHIDHIGRLPW 94 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 L KQ +Y P + Sbjct: 95 LLAKGFKQ----PIYCTPATAE 112 >gi|315221395|ref|ZP_07863316.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315189514|gb|EFU23208.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 553 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAETKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI+ + GG I H SLG GN+ Y Sbjct: 105 GND-TVKKFNDFHVIDED----TEIDFGGTI-VSFFKTTHSIPESLGIVLKTSEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|313773557|gb|EFS39523.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] Length = 573 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 48 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 103 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 104 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHESDVAEVGEQFDLEFIAVNHS 163 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 164 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 214 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 215 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 257 >gi|42518998|ref|NP_964928.1| hypothetical protein LJ1073 [Lactobacillus johnsonii NCC 533] gi|56749441|sp|Q74JN5|RNZ_LACJO RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|41583285|gb|AAS08894.1| ElaC [Lactobacillus johnsonii NCC 533] Length = 309 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG S G P K+R I+ N + D G Sbjct: 1 MEIQFLGT--SAGQP-------------SKSRNVSC---IALKLLDELNEVWLFDVGEAT 42 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L+ + + + +H H DHI G+ G R + P+ +Y + + Sbjct: 43 QHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQ-GDGGPLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S R + +YP + +V++ + + H R+ S GFR Sbjct: 102 TSLR---VSKTRVSYP--IKYVVLKEDGLIFENDI----FAVYTARLDH-RVPSFGFRV 150 >gi|197333993|ref|YP_002154917.1| cleavage and polyadenylation [Vibrio fischeri MJ11] gi|197315483|gb|ACH64930.1| cleavage and polyadenylation [Vibrio fischeri MJ11] Length = 482 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 15/82 (18%) Query: 46 RVSERGSNTTVIVDTGP-----------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++ G+N +++D G + + + + A++ TH H DHI + Sbjct: 31 CINHNGNNHGILIDCGLFQGRDAKDKNGNERKLDIEFPISHLKALILTHTHIDHIGRLPW 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 L KQ +Y P + Sbjct: 91 LLAKGFKQ----PIYCTPATAE 108 >gi|251781074|ref|ZP_04823994.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085389|gb|EES51279.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 554 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 20/77 (25%) Query: 56 VIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G F + ++R + + TH H DHI GI ++ Sbjct: 32 IVIDCGLAFPDEDLYGIDIIIPDVTYLIRNK-NKVKGFFITHGHEDHIGGIP-----YIL 85 Query: 102 QKRPIDVYAAPDCMKHL 118 Q+ + VYA + + Sbjct: 86 QQINVPVYATKLTLALI 102 >gi|154505865|ref|ZP_02042603.1| hypothetical protein RUMGNA_03407 [Ruminococcus gnavus ATCC 29149] gi|153793883|gb|EDN76303.1| hypothetical protein RUMGNA_03407 [Ruminococcus gnavus ATCC 29149] Length = 206 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 + +L TH H DHI GID L+++ + VYA+ Sbjct: 48 QLQGILLTHGHFDHIMGID-----TLRREWSVPVYASA 80 >gi|313897451|ref|ZP_07830994.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] gi|312957821|gb|EFR39446.1| metallo-beta-lactamase domain protein [Clostridium sp. HGF2] Length = 203 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 11/80 (13%) Query: 51 GSNTTVIV-DTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 V++ D G + + Q +DA++ TH H DHI G+D L +K Sbjct: 20 WEENHVLIVDPGSKSHKLQETIDSQNGVVDAIVLTHGHFDHIAGVDALV-----KKYHCP 74 Query: 108 VYAAPDCMKHLFE---SFRY 124 VY M L + +F Y Sbjct: 75 VYINELDMAMLQDPMLNFSY 94 >gi|291522835|emb|CBK81128.1| Zn-dependent hydrolases, including glyoxylases [Coprococcus catus GD/7] Length = 209 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 11/86 (12%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPD-FY-MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T L I + + ++VD + V+ E ++ A+L TH H DHI ++ L Sbjct: 16 TNCYLII----NKENKEALLVDPADNALRISNVIEENGCTLKAILLTHGHFDHIMALNDL 71 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFES 121 K++ + VYA + L +S Sbjct: 72 -----KKRYNVPVYAHEEEEDVLKQS 92 >gi|268324354|emb|CBH37942.1| conserved hypothetical protein, metallo-beta-lactamase superfamily [uncultured archaeon] Length = 217 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 22/128 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--------FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 S I N+ ++ DTG ++++RE SID + +H H DH+ G+ Sbjct: 22 SCLIEA-----DNSKILFDTGASGDILSYNMKQLELIRE---SIDVIALSHEHWDHVGGL 73 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 D + ++VY L + + + + P + V ++ + Sbjct: 74 DAVL------HPEVEVYLPRSFSSELKKRIAKQVAKVIEVSGPGDITHRVHTTGELGLKT 127 Query: 153 KSAGGVIE 160 K V+E Sbjct: 128 KEQSLVLE 135 >gi|254457611|ref|ZP_05071039.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] gi|207086403|gb|EDZ63687.1| metallo-beta-lactamase family protein [Campylobacterales bacterium GD 1] Length = 650 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 26/160 (16%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N ++VD G F + LRE I AV+ TH H DHI + Sbjct: 124 ENEAILVDIGMSFPDEDMHGVDILVPDFTYLREIKHKIKAVIITHAHEDHIGAMP----- 178 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP----ICMKS 154 +L ++ +YA P + + F + + P+V V + + + M Sbjct: 179 YLYKEMQFPIYATPLPLAMIGNKFDEHHIKECRKYFNPVVKREVYDIGEDFKVEWMHMTH 238 Query: 155 AGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 + ++ I + G I G F+ + Y D++ Sbjct: 239 SILDSSSLAITTEAGTIIHTGDFKIDHTPVDGYTADLHRL 278 >gi|116751027|ref|YP_847714.1| metallo-beta-lactamase family protein [Syntrophobacter fumaroxidans MPOB] gi|116700091|gb|ABK19279.1| metallo-beta-lactamase family protein [Syntrophobacter fumaroxidans MPOB] Length = 391 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 16/145 (11%) Query: 43 KISRVSERGSNTTVIVDTG---PDFYMQVLREQV------LSIDAVLYTHPHADHIHGID 93 I G ++D+G RE + I+A++ +H H DH GI Sbjct: 145 LIELEELDGRTRKFLLDSGWSYKWMDECFKREGIDRMLMNREIEAIIISHEHFDHFWGI- 203 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 K I Y + + + P +NPI+ + Sbjct: 204 ---PVTYKYDPAITTYIPEGFYPEGLQYLKDAGHKGELIKVKPGLNPIISGLATFVFAVP 260 Query: 154 SA---GGVIEAIPILQQHGRISSLG 175 G ++ HG +S G Sbjct: 261 IICRVYGEQSIYVNVKDHGLVSITG 285 >gi|323704668|ref|ZP_08116246.1| beta-lactamase domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536130|gb|EGB25903.1| beta-lactamase domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 305 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 33/241 (13%) Query: 52 SNTTVIVDTG-PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G P+ +V+ V ID ++ THPH DHI G+D + + R Sbjct: 65 DNKAMLIDAGVPEMGKKVVDYIKSLGVTKIDILVGTHPHEDHIGGMDRVI-ESFEIGRF- 122 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP-ICMKSAGGVIEAIPIL 165 Y ++F Y A ++ V + + P + + L Sbjct: 123 --YMPKVTTNT--KTFEYVLNAAKNKGLKIDVAKAGVTLDLGPSVSAEIIAPNSSKYADL 178 Query: 166 QQHGRISSLGFRFGNVAYCTDVNAFPA-ESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 ++ + L ++ + + D A E +EK +L D LK G H S S S + Sbjct: 179 NEYSAVIKLTYKNTSFLFTGDAGAESEREMIEKGYDLKS---DVLKVGHHGS--STSTTA 233 Query: 225 KKIELINPKNAILT---HMHVDLDYDMVLKSTPSRVVPAF------------DGMQFSSP 269 ++ ++PK A+++ + LK +R +P + DG S Sbjct: 234 SFLDDVSPKYAVISCGKGNDYGHPHSSTLKKLKARNIPVYRTDECGTIIAVSDGQSISFN 293 Query: 270 I 270 + Sbjct: 294 V 294 >gi|317495418|ref|ZP_07953787.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] gi|316914477|gb|EFV35954.1| metallo-beta-lactamase superfamily protein [Gemella moribillum M424] Length = 556 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 32/153 (20%) Query: 42 LKISRVSERGSNTTVI-VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + I + ++ +D Y + + + I A++ TH H DHI G+ FL Sbjct: 34 IIIIDAGVKFPGDNILGIDYVIPDYS-YIEKNIDKIKALVITHGHEDHIGGLP-----FL 87 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN-------------ND 147 +K + +Y P + + L++ VI+ ++ Sbjct: 88 LRKVSLPIYGGPLAIGLIR-------SKLEEHNLLARAELNVIDEDTILEFKYLKVSFHN 140 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + + GVI P G I G F+F Sbjct: 141 TTHSIPDSFGVIVNTP----QGNIVHTGDFKFD 169 >gi|310819554|ref|YP_003951912.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] gi|309392626|gb|ADO70085.1| Metallo-beta-lactamase family protein [Stigmatella aurantiaca DW4/3-1] Length = 546 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 27/128 (21%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF L++ ++ TH H DH+ + +L Sbjct: 27 LLIDAGLMFPTVEAPGIDIVIPDFSH--LKQHASQFRGIVLTHGHEDHMGALP-----YL 79 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSA 155 P+ VY + + ++ RT P+ + +E + V + A Sbjct: 80 LDDLPVPVYGTRYTLAMARNRLDELGVIADLREIEPRTPFPVGSVFTVEASRVTHTVPDA 139 Query: 156 GGVIEAIP 163 G I P Sbjct: 140 VGYIVRTP 147 >gi|289450561|ref|YP_003475551.1| metallo-beta-lactamase domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185108|gb|ADC91533.1| metallo-beta-lactamase domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 273 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 53/218 (24%) Query: 56 VIVDTGPDFY---MQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 V++D G M++ + I + +H H+DH+ G++ + F ++ Sbjct: 24 VLIDAGLSLRSLKMKLAELGLQDISILGIFISHEHSDHVKGLEAIANNFKA-----SIFI 78 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L R+ P +I + AG ++A+ I H Sbjct: 79 TNGTKGALESKMRH----------PEKQKWRIIAAQSE---IDLAGFAVKAVAIS--HDA 123 Query: 171 ISSLGFRFG----NVAYCTDVNAFPAESLEKLQNL---DFLIIDA--------------- 208 + F VA +D E E L + D ++A Sbjct: 124 TEPVAFTVSCGGLKVAVVSDTGVITPE-WEILADTEKFDIFFLEANYDQEMLLGGSYSYP 182 Query: 209 --LKNGLHSSHFSLSESLKKIELI---NPKNAILTHMH 241 ++ H S S++ + + + N +LTH+ Sbjct: 183 LKMRIMSDRGHLSNSQTAEFLYRLYNNGCCNFVLTHLS 220 >gi|295131017|ref|YP_003581680.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Propionibacterium acnes SK137] gi|291375736|gb|ADD99590.1| Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa analog [Propionibacterium acnes SK137] Length = 563 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 38 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 93 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 94 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHESDVAEVGEQFDLEFIAVNHS 153 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 154 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 204 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 205 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 247 >gi|160893542|ref|ZP_02074326.1| hypothetical protein CLOL250_01096 [Clostridium sp. L2-50] gi|156864527|gb|EDO57958.1| hypothetical protein CLOL250_01096 [Clostridium sp. L2-50] Length = 302 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 27/88 (30%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD----F 64 +LG G + +P R +S+ I + ++++VD G Sbjct: 6 LLGTGGMMPLP----------------YRALTSMMIRY-----NGSSILVDCGEGTQVAV 44 Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGI 92 Q ID +L+TH HADHI G+ Sbjct: 45 KQQ--GWSFKPIDVILFTHFHADHISGL 70 >gi|228994721|ref|ZP_04154533.1| Alkyl sulfatase [Bacillus pseudomycoides DSM 12442] gi|228765030|gb|EEM13772.1| Alkyl sulfatase [Bacillus pseudomycoides DSM 12442] Length = 647 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 11/80 (13%) Query: 50 RGSNTTVIVDT--GPDFYMQVLR------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 RG+ +I+D + L+ E + I A++ TH H DH GI L Sbjct: 124 RGNTGWIIIDCLTSAETAKAALKLVNEHLENMP-ISAIILTHSHTDHYGGI--LSVLCSD 180 Query: 102 QKRPIDVYAAPDCMKHLFES 121 ++ I+VYA MK + E Sbjct: 181 TEKKINVYAPEGFMKAVIEE 200 >gi|225351778|ref|ZP_03742801.1| hypothetical protein BIFPSEUDO_03375 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158122|gb|EEG71405.1| hypothetical protein BIFPSEUDO_03375 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 703 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 171 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVEALVLTHGHEDHIGGV----PYLL 224 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + +NP ++E K G Sbjct: 225 KLRPDIPLIGSKLTLAFVEAKCK-----------EHRINPRLVEVKGRD---KLKVGPFN 270 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L F D + L KL + +D L+ Sbjct: 271 LEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLM 330 Query: 206 ID 207 +D Sbjct: 331 MD 332 >gi|187777507|ref|ZP_02993980.1| hypothetical protein CLOSPO_01098 [Clostridium sporogenes ATCC 15579] gi|187774435|gb|EDU38237.1| hypothetical protein CLOSPO_01098 [Clostridium sporogenes ATCC 15579] Length = 300 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 22/85 (25%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHG---- 91 S+ + + +++D G D + L+ + + +D V+ THPH DHI G Sbjct: 66 SILVQT-----KDKNILIDAGTRKSSDNLINYLKKQHIKKLDYVIATHPHEDHIGGMPKV 120 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMK 116 ID YA Sbjct: 121 IDEFEISNF--------YAPKKTAN 137 >gi|168181284|ref|ZP_02615948.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237793739|ref|YP_002861291.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182675407|gb|EDT87368.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229263259|gb|ACQ54292.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 287 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 22/85 (25%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHG---- 91 S+ + + +++D G D + L+ + + +D V+ THPH DHI G Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDNLINYLKKQHIKKLDYVIATHPHEDHIGGMPKV 107 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMK 116 ID YA Sbjct: 108 IDEFEISNF--------YAPKKTAN 124 >gi|330431029|gb|AEC16088.1| hydroxyacylglutathione hydrolase [Gallibacterium anatis UMN179] Length = 232 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 46 RVSERGSNTTVIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + +IVD + L++ L I+A+L TH H DH G+ LR Y+ Sbjct: 15 WCYSRDNQHALIVDPSEAEVVENFLQQHQLKIEAILITHNHNDHTGGVAELRKYYPFA-- 72 Query: 105 PIDVYAAPDCMK 116 +YA + Sbjct: 73 --PIYAPAEVGD 82 >gi|241890148|ref|ZP_04777446.1| ribonuclease J 1 [Gemella haemolysans ATCC 10379] gi|241863770|gb|EER68154.1| ribonuclease J 1 [Gemella haemolysans ATCC 10379] Length = 556 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 32/153 (20%) Query: 42 LKISRVSERGSNTTVI-VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + I + ++ +D Y + + V I A++ TH H DHI G+ FL Sbjct: 34 IVIIDAGVKFPGDNILGIDYVIPDYS-YIEKNVDKIKALIITHGHEDHIGGLP-----FL 87 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN-------------ND 147 +K + +Y P + + L++ VI+ ++ Sbjct: 88 LRKVNLPIYGGPLAIGLIR-------SKLEEHNLLAKAELNVIDEDTVLNFKYLKVSFHN 140 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + + GVI P G I G F+F Sbjct: 141 TTHSIPDSFGVIVNTP----QGNIVHTGDFKFD 169 >gi|167042474|gb|ABZ07199.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW133C7] Length = 300 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 93/329 (28%), Gaps = 100/329 (30%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG + P R S + + R E ++ D G Sbjct: 2 MELIFLGTAGAQ----------------PTLERYTSCICLVRDGEI-----LMFDAGESA 40 Query: 65 YMQVLREQVLSIDA--VLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 + L+ + + TH H DH GI G Q R PI++Y + + Sbjct: 41 QISYLKSNLGWNKKMKIFVTHLHGDHCVGILGFLQTMTLQNRTEPIEIYGPEGIDEFIAA 100 Query: 121 -----------------------------------------SFRYCFKALDDRT--YPPI 137 +F + F+ + YP Sbjct: 101 NIKVMNFGLSFPVLITPINEGVIVSEEKYEVRACEAEHSVPTFSFLFEEKEKPGTFYPEK 160 Query: 138 VN---------PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 N ++ + + + E + +I G D Sbjct: 161 ANSLGIPKGELWHKLQQGEEVVIENKSIKPSEVMGPNVPGKKIGVSG----------DTR 210 Query: 189 AFPAESLE-KLQNLDFLI-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMH 241 P + LE +N D+L+ +D LK + H + E+ + N N ILTH Sbjct: 211 --PTKKLEVFFKNCDYLVFDSTFLDELKEKAIQTLHSTAKEAAVFAKNANVSNLILTHFS 268 Query: 242 VDLDYDMV----LKSTPSRVVPAFDGMQF 266 + V K+ + V+ A D ++ Sbjct: 269 ARYKDEKVLLDEAKTIHNSVIAANDQLKI 297 >gi|161869143|ref|YP_001598309.1| hydrolase [Neisseria meningitidis 053442] gi|161594696|gb|ABX72356.1| hydrolase [Neisseria meningitidis 053442] Length = 210 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNHWLEEGETLKVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|315081288|gb|EFT53264.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] Length = 557 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 32 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 87 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 88 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHESDVAEVGEQFDLEFIAVNHS 147 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 148 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 198 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 199 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 >gi|226310040|ref|YP_002769934.1| ribonuclease J 1 [Brevibacillus brevis NBRC 100599] gi|226092988|dbj|BAH41430.1| ribonuclease J 1 [Brevibacillus brevis NBRC 100599] Length = 556 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 30/137 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F L++ I A+L TH H DHI I Sbjct: 31 EDEIIIIDCGVKFPENEMFGIDLVIPDISYLKDNQHKIKALLLTHGHEDHIGAIP----- 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ ++ + +Y + + K + R + + E+ ++P Sbjct: 86 YILRQIKVPIYGGRLTLGLVKA------KLEEHRLQNEVKLIPISEDTEIPFA------K 133 Query: 159 IEAIPILQQHGRISSLG 175 ++A H SLG Sbjct: 134 LKATFFRTNHSIPDSLG 150 >gi|221638946|ref|YP_002525208.1| beta-lactamase domain-containing protein [Rhodobacter sphaeroides KD131] gi|221159727|gb|ACM00707.1| Beta-lactamase domain protein [Rhodobacter sphaeroides KD131] Length = 557 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 41/164 (25%), Gaps = 35/164 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHADH 88 + G ++VD G F L E+ I+A+ TH H DH Sbjct: 22 YVYGYGPEGRERLIVVDLGVTFPDMETTPGVDLIMADISWLEERQDRIEAIFITHAHEDH 81 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 I + L + VYA F + P ++ Sbjct: 82 IGALGHLWP-----RLKAPVYARRFTGTIGRLKF--------EEHGLPADQITIVGARPE 128 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G E + H S G + + D Sbjct: 129 ----MVEAGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFK 168 >gi|313884725|ref|ZP_07818481.1| ribonuclease J 1 [Eremococcus coleocola ACS-139-V-Col8] gi|312620093|gb|EFR31526.1| ribonuclease J 1 [Eremococcus coleocola ACS-139-V-Col8] Length = 570 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F Q + E + A++ +H H DHI GI FL Q Sbjct: 35 VLLDCGVLFPEDDLLGIDYVINDFQYIIENQHKVKALVISHGHEDHIGGIP-----FLLQ 89 Query: 103 KRPIDVYAAPDCMKHLFES 121 + + +YA P + Sbjct: 90 QLNVPIYADPLAAALIRNK 108 >gi|167394355|ref|XP_001740944.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894743|gb|EDR22626.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 204 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 54/172 (31%), Gaps = 20/172 (11%) Query: 29 DPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPHA 86 P R +S I +VD G + + V I V+ TH H+ Sbjct: 10 SAARPIYGRMTTSTLIYT---NNGEDLYLVDCGDGITNVLTQFGVPLEKIRGVIITHSHS 66 Query: 87 DHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 DH GI G+ V K + + F+ D T P V+ I + ++ Sbjct: 67 DHASGI---AGFVHSVVFGTSVELIIAAPKGIQKLIDVVFEYSGD-TVPKTVSYIDLSDD 122 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRFG---------NVAYCTDVNA 189 + ++PI HG I G ++A D N Sbjct: 123 QIT-HFSIKNTSFTSVPIP-HHGSIKGHGIICQTHYTNHQDTSIAITGDTND 172 >gi|83590102|ref|YP_430111.1| Beta-lactamase-like [Moorella thermoacetica ATCC 39073] gi|83573016|gb|ABC19568.1| Beta-lactamase-like protein [Moorella thermoacetica ATCC 39073] Length = 348 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 9/68 (13%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G P + + V +D V+ THPH DHI G+D + + Sbjct: 120 GGQNILIDAGTNEAGPVVVQDLKQYAVAKLDYVIGTHPHEDHIGGLDQVIN-TFPVGK-- 176 Query: 107 DVYAAPDC 114 VY Sbjct: 177 -VYLPRVT 183 >gi|317121874|ref|YP_004101877.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter marianensis DSM 12885] gi|315591854|gb|ADU51150.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter marianensis DSM 12885] Length = 589 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 30/140 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++D G F L E+ + + TH H DHI GI Y Sbjct: 63 EQDLIVIDAGLAFPGDDMPGVDVVIPDYGYLIERKQKLRGIFLTHGHEDHIGGI----PY 118 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK+ + +YA + + D PP + V + G Sbjct: 119 LLKEIQA-PIYATRLTLGLVERKL-----EEDKLALPP-------RSRAVRPGERIRAGS 165 Query: 159 IEAIPILQQHGRISSLGFRF 178 P L H S+GF Sbjct: 166 FTVEPFLVNHSIPDSVGFAI 185 >gi|315648079|ref|ZP_07901180.1| beta-lactamase domain protein [Paenibacillus vortex V453] gi|315276725|gb|EFU40068.1| beta-lactamase domain protein [Paenibacillus vortex V453] Length = 559 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 33/154 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N V+VD G F + L E + +L TH H DHI G+ Y Sbjct: 31 ANDIVVVDAGLKFPEEDMLGIDIVIPDISYLTENRDKVRGILLTHGHEDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK + VY + + R + + ++ N D + + G Sbjct: 87 VLKHLN-VPVYGTKLTLGLVENKLREANLLGETK--------RILINADSEVQL---GNT 134 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 ++A H S+G GNV + D Sbjct: 135 LKATFFKTNHSIPDSVGISIETPEGNVVHTGDFK 168 >gi|288928712|ref|ZP_06422558.1| metallo-beta-lactamase domain-containing protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329696|gb|EFC68281.1| metallo-beta-lactamase domain-containing protein [Prevotella sp. oral taxon 317 str. F0108] Length = 424 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 34/175 (19%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + + +I+D G + + + E V +DA+ YTH H DH+ G F Sbjct: 31 AQSRIIIDLGSNLPGSKVKELMAEQIAEVVSGVDAIFYTHYHGDHV-------GLFQFVP 83 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 I Y +K + + + + +N + G I P Sbjct: 84 DSIPQYIGEGALKVMKCKYETLSRHENIEQELSAIN----RMKTYQVNCTIQIGDIRITP 139 Query: 164 ILQQHGRISSLGFRF----------GNV---AYCTDVNAFPAESLEKLQNLDFLI 205 H S F+ G+ Y + + ++ +D LI Sbjct: 140 YYCSHSAFDSYMFKIETQGRVILHTGDFRRHGYLG--KSLDGVLKKYIRQVDILI 192 >gi|302874372|ref|YP_003843005.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307691029|ref|ZP_07633475.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302577229|gb|ADL51241.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 338 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 20/202 (9%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + N ++++D G + + ++ + +D V+ THPH DH+ G+D Sbjct: 100 SIFIQQ-----GNNSMLIDAGTNDQKKTVKNYLDTQGITKLDYVVCTHPHKDHVGGMD-- 152 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Y + + VY E+F+ A++ + I + N Sbjct: 153 --YIINNFQVDKVYMPNVT--TTTETFQDVLVAMEKKGLKSIAPTVGETFNLGDAKCTIL 208 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 E+ + + + L F + + D + + + D D LK G H Sbjct: 209 APNSESYEDINDYSIVMKLQFGNTSFMFDGDAQKLSEKEI-IAKGFDV-KADVLKIGHHG 266 Query: 216 SHFSLSESLKKIELINPKNAIL 237 S + S ++ + PK A++ Sbjct: 267 S--DSASSKTYLDAVKPKYAVI 286 >gi|209518442|ref|ZP_03267265.1| beta-lactamase-like protein [Burkholderia sp. H160] gi|209501163|gb|EEA01196.1| beta-lactamase-like protein [Burkholderia sp. H160] Length = 255 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 20/177 (11%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + + +++D G + ++ ID V TH H DH + + Sbjct: 20 TSLLV--------DDDILIDAGTGV-GNLSEAELAHIDHVFITHSHLDHTAFLPLMIDAV 70 Query: 100 LKQK-RPIDVYAAPDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVPICMKSAGG 157 + + +P+ V+A + L D P P + +V G Sbjct: 71 AEHRTQPLTVHAPQVTLDILHAHLFNNLIWPDFTVIPSPAAPGVRFATLEVGHSTTLRGR 130 Query: 158 VIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA--ESLEKLQNLDFLIIDA 208 + A+P + ++G+ G++ + D PA + + L +I++ Sbjct: 131 TLTALPAQH---VVPAVGYAVDSGAGSLVFSGDTTTNPAFWAIVSAMPRLRHVIVET 184 >gi|126661072|ref|ZP_01732155.1| hypothetical protein CY0110_22996 [Cyanothece sp. CCY0110] gi|126617650|gb|EAZ88436.1| hypothetical protein CY0110_22996 [Cyanothece sp. CCY0110] Length = 263 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 14/184 (7%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPI 106 + +++D G D + +E + + +H H+DH G+ G K Q Sbjct: 30 TGKKLLIDCGSDIRFSLYKEGFSYRDVTDIYISHLHSDHAGGL-EYVGLTTKFDPQCDKP 88 Query: 107 DVYAAPDCMKHLFE-SFRYCFKALDDRT--YPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 ++Y + D +++ + +++ I+N I +++ I Sbjct: 89 NLYLSHDIAAKIWDNTLSGGMGSIEGSLANLESFFKVHSIDNTRHFIWETIKFELVKTIH 148 Query: 164 ILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHF 218 I + S G F + +D + + + Q D + D + H Sbjct: 149 INNGTYIMPSYGLFFIVNNKKIFITSDTQLYYKKLQKYYQEADIIFHDCEISKYPTPVHS 208 Query: 219 SLSE 222 E Sbjct: 209 HYKE 212 >gi|329940590|ref|ZP_08289871.1| beta-lactamase domain-containing protein [Streptomyces griseoaurantiacus M045] gi|329300651|gb|EGG44548.1| beta-lactamase domain-containing protein [Streptomyces griseoaurantiacus M045] Length = 619 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 72/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I AV+ TH H DHI G+ Y L+++ I V + + L Sbjct: 128 IRDRLDDIVAVVLTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFL---------- 173 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 D + + P + + + G + + H SL R G V + Sbjct: 174 -DAKLKEHGIRPRTVRVREGD---RRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHT 229 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 230 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 289 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 290 APRRVIVSSFASHVH 304 >gi|254503740|ref|ZP_05115891.1| hypothetical protein SADFL11_3779 [Labrenzia alexandrii DFL-11] gi|222439811|gb|EEE46490.1| hypothetical protein SADFL11_3779 [Labrenzia alexandrii DFL-11] Length = 240 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 42/248 (16%) Query: 50 RGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R + V++D G M + S D +L+TH H DHI G+ + + + Sbjct: 2 RAGDALVLIDCGSGARNLGMDLCSAGTRSFD-LLFTHTHLDHICGLPFFKPAYDPNF-SV 59 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG------GVIE 160 +A + PPI V AG + Sbjct: 60 TAWAGHFQDDTCLMDI------VSRIMSPPIFPVAAKTLKAVEFKTFRAGDVLPRRDELV 113 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFLIIDALKNG 212 I H + G+RF ++ TD A ++ D +I DA+ Sbjct: 114 IRTIRLNHPG-GACGYRFDFKGKSICIITDHEHGDPDVDAALPAFVEGADIMIYDAMYTD 172 Query: 213 L------HSSHFSLSESLKKIELINPKNAILTHMHVDL--------DYDMVLKSTPSRVV 258 H + ++++ + N K +L H D + + K+ + Sbjct: 173 AEYEKFKGWGHSTWQKAVELAKTANVKTPVL--FHHDPTRSDEALDEIGLAAKAVHPGTL 230 Query: 259 PAFDGMQF 266 A GM Sbjct: 231 VARQGMIL 238 >gi|187934604|ref|YP_001885784.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum B str. Eklund 17B] gi|187722757|gb|ACD23978.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum B str. Eklund 17B] Length = 572 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 20/77 (25%) Query: 56 VIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G F + ++R + + TH H DHI GI Y L Sbjct: 50 IVIDCGLAFPDEDLYGIDIIIPDVTYLIRNK-NRVKGFFITHGHEDHIGGI----PYVL- 103 Query: 102 QKRPIDVYAAPDCMKHL 118 Q+ + VYA + + Sbjct: 104 QQINVPVYATKLTLALI 120 >gi|123967075|ref|YP_001012156.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. MIT 9515] gi|123201441|gb|ABM73049.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. MIT 9515] Length = 667 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 57/232 (24%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGI-DGLRG 97 + +++D G F L+ + ++ TH H DHI GI L+ Sbjct: 46 EDDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANLNRFRGMIVTHGHEDHIGGISHHLKK 105 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF----------------RYCFKALDDRTYPPIVNPI 141 + + +Y P + L R + + I N Sbjct: 106 FNIPV-----IYGPPLAISMLKGKMEEAGVANRTTTQAIKPRQVVRLGQHFSLEFIRNTH 160 Query: 142 VIENN-----DVPICMKSAGGVIEA--IPILQQHGRISSLGFRFGN--VAYCTD-----V 187 I ++ P+ + G + +P ++H I + + + +D V Sbjct: 161 SIGDSFSLALTTPVGVVFFTGDFKFDHLPPDKKHADIERMAYYGDKGVLCLLSDSTNSEV 220 Query: 188 NAFPAESLEKLQNLDFLIIDA-----LKNGLHSSH---FSLSESLKKIELIN 231 F + NLD +I +A L S+H + ++K I Sbjct: 221 KGFVPSEISVFPNLDRIISEAKGRVMLTTFASSTHRVAMVIQLAMKHGRKIG 272 >gi|118431090|ref|NP_147298.2| putative exonuclease [Aeropyrum pernix K1] gi|116062416|dbj|BAA79487.2| putative exonuclease [Aeropyrum pernix K1] Length = 671 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 62/210 (29%), Gaps = 59/210 (28%) Query: 39 RSSLKISRVSERGSNTTVIVDTG----------------PDFYMQVLREQVLSIDAVLYT 82 RS++ + + V++D G P+F V +DAV+ + Sbjct: 205 RSAILV-----DTGESKVLLDAGLSPSGYGPDSYPYYWSPEFR-------VDELDAVVIS 252 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H H DH+ + K VYA P + R + P P Sbjct: 253 HAHLDHVGTL----PLLFKYGFRGPVYATPPTRDIMIIVLRDLINLMRKAQGEPPFEPRD 308 Query: 143 IENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG-------------NVAYCTDVNA 189 +E + + V + P ++ + G G N+ Y D Sbjct: 309 VEKALTRLIPVNYNTVTDVAPDIKM--TFINAGHILGSSMVHLHIGQGLYNILYTADFKF 366 Query: 190 -----------FPAESLEKLQNLDFLIIDA 208 P Q ++ LI++A Sbjct: 367 YRIKNDRSTRLLPPAEYSF-QRVEALIMEA 395 >gi|110633391|ref|YP_673599.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110284375|gb|ABG62434.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 555 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 48/228 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADH 88 L + R + T +++D G F + L +Q+ ++ ++ TH H DH Sbjct: 23 LALYGYGPRDNRTWIMIDCGVSFPGENLPGVDLILPDVSFIEDQLENLAGIIITHAHEDH 82 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + L + +V+ P L P V + + + Sbjct: 83 YGALLDLWP-----RLKTNVWMTPFTAGLLE-------AKRQGEVNAPKVPVTIYKAGET 130 Query: 149 PICMKSAGGVI---EAIPILQ------QHGRISSLG-FRFG---NVAYCTDVNAFPAESL 195 A I +IP G + G ++ + TD Sbjct: 131 FTVGPFAIEAIAVAHSIPEPVSLAITTPAGTVIHTGDWKIDPAPELGPKTD-----EARF 185 Query: 196 EKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 L + + LI D A++ G+ S + L+++ P +T Sbjct: 186 RALGEKGVLALICDSTNAMREGVSPSEQDVGRGLREVIEKAPGRVAVT 233 >gi|15613039|ref|NP_241342.1| hypothetical protein BH0476 [Bacillus halodurans C-125] gi|10173089|dbj|BAB04195.1| BH0476 [Bacillus halodurans C-125] Length = 289 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 69/209 (33%), Gaps = 37/209 (17%) Query: 51 GSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G +++VD G F + E + + TH H DH+ G+ LR Sbjct: 31 GEGQSLMVDAGNSNRHARTFLESLKAENLPMPSLAVLTHWHWDHVFGLRELR-------- 82 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC---MKSAGGVIE- 160 I A + L ++ V + ++ C +K G + Sbjct: 83 -IPAVAHTRTYEALRRM-------QPLSWDNSALDKRVEQGEEIAFCAEMIKREFGEMRD 134 Query: 161 ---AIPILQQHGRISS-LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII-DALKN---- 211 +P + H +I LG G V + + P S+ L+ L + DAL Sbjct: 135 IDIVLPTITFHTKIELDLGGVRGTVEHVG-GDHAPDSSVIYLEEEKVLFLGDALYPNLYA 193 Query: 212 -GLHSSHFSLSESLKKIELINPKNAILTH 239 + ++ L K+ +L+H Sbjct: 194 RNPEYTVNNMRGLLNKVRTYQADTYVLSH 222 >gi|315612728|ref|ZP_07887639.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] gi|315314838|gb|EFU62879.1| metallo-beta-lactamase superfamily protein [Streptococcus sanguinis ATCC 49296] Length = 553 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGIVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|319404244|emb|CBI77837.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 558 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 64/231 (27%), Gaps = 63/231 (27%) Query: 47 VSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 + ++VD G PD L + ++ ++ TH H DH Sbjct: 29 FGPKDCREWLLVDMGVSFAGPELPGVDLILPDIR--FLENEKHNVCGLILTHAHEDHYGA 86 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + L K I +Y L + I N Sbjct: 87 VLDLWP-----KLKIPIYCTCFTAGLL------------ESKRQSDFEFHEIPVNIFQSG 129 Query: 152 MKSAGGVIEAIPILQQH--------------GRISSLG-FRFG---NVAYCTDVNAFPAE 193 G I H G + G ++ ++ TD E Sbjct: 130 DCFQVGPFSIEAISVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPITD-----EE 184 Query: 194 SLEKLQNLDFLII-----DALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 L N L + +AL++G+ S + ES+ + I + AI T Sbjct: 185 RFRTLGNKGVLALLCDSTNALQDGISPSEQQVQESISEIILKAKGRIAITT 235 >gi|302348117|ref|YP_003815755.1| Putative exonuclease [Acidilobus saccharovorans 345-15] gi|302328529|gb|ADL18724.1| Putative exonuclease [Acidilobus saccharovorans 345-15] Length = 674 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 20/88 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLRE---QVLSIDAVLYTHPHADH 88 RS + I S + +++D G PD Y + ++ +DAV+ +H H DH Sbjct: 208 RSCILI-----DTSESKILLDVGFAQSGFGPDAYP-MFDAPELRLDELDAVVISHAHMDH 261 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + L K +Y P Sbjct: 262 VG----LAPMLYKYGYRGPIYMTPATRD 285 >gi|296114658|ref|ZP_06833311.1| Beta-lactamase-like protein [Gluconacetobacter hansenii ATCC 23769] gi|295979014|gb|EFG85739.1| Beta-lactamase-like protein [Gluconacetobacter hansenii ATCC 23769] Length = 222 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ +R S V+VD G D +QV+ ++ L++DA++ TH H DH G D LR Sbjct: 20 NCSIL----WDRRSRHAVVVDPGGDVPRLLQVIADKNLTVDAIILTHGHLDHAGGADALR 75 Query: 97 GYFLKQKRPIDV 108 ++ + V Sbjct: 76 DALTTRQDGVTV 87 >gi|253689739|ref|YP_003018929.1| beta-lactamase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756317|gb|ACT14393.1| beta-lactamase domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 329 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 21/129 (16%) Query: 56 VIVDTG--PDFYMQV------LRE---QVLSIDAVLYTHPHADHIHGI--DGLRGY---- 98 ++VDTG P F Q LR ID VL TH HADH G+ DG + Sbjct: 101 ILVDTGAGPLFGKQGGKLPDNLRAAGYPPEKIDTVLLTHIHADHSGGVSRDGKLVFPNAT 160 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ +D + P + +S ++ F +D P + + Sbjct: 161 IYVNQKDVDFWLNPTNSNQVRDSEKHTFGQSEDSLQPVLAAKRLKTFTGKQQLFPG---- 216 Query: 159 IEAIPILQQ 167 I A+P Sbjct: 217 ITAVPAPGH 225 >gi|225387771|ref|ZP_03757535.1| hypothetical protein CLOSTASPAR_01541 [Clostridium asparagiforme DSM 15981] gi|225046132|gb|EEG56378.1| hypothetical protein CLOSTASPAR_01541 [Clostridium asparagiforme DSM 15981] Length = 704 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +T ++VD G F + L+ + + + TH H DHI + Sbjct: 180 EDTIIVVDCGLAFPGDDMLGIDLVIPDVTYLKNNIDKVKGFVITHGHEDHIGALP----- 234 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 ++ ++ + VY M + Sbjct: 235 YILEQINVPVYGTKLTMALIEHK 257 >gi|217976968|ref|YP_002361115.1| beta-lactamase domain protein [Methylocella silvestris BL2] gi|217502344|gb|ACK49753.1| beta-lactamase domain protein [Methylocella silvestris BL2] Length = 380 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Query: 51 GSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ--- 102 G ++D G + M++LR ++DA++ +H H DH G+ G+ + Sbjct: 109 GETRNALIDFGYTPGALNNNMRLLRLDPSALDALVLSHGHYDHFGGL---VGFLRENKGT 165 Query: 103 -KRPIDVYA 110 K+ + +Y Sbjct: 166 LKKKLPIYL 174 >gi|71907623|ref|YP_285210.1| metallo-beta-lactamase family protein [Dechloromonas aromatica RCB] gi|71847244|gb|AAZ46740.1| metallo-beta-lactamase family protein [Dechloromonas aromatica RCB] Length = 320 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 63/232 (27%), Gaps = 60/232 (25%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY-AAPDCMKHLFESFRYCFKALDDRTYPP 136 + +H DH+ G ++ I ++ P + Sbjct: 104 HIFISHLQWDHLMGFPYFAPMYIP-GNRIVIHGCHPQLEASIRLQM-----QAPCFPVDY 157 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDV----- 187 IE + + + P Q H S G+RF + V Y TD Sbjct: 158 AQAGARIEFDVMTPDKPQYIAELNVTPKKQLHAG-DSYGYRFESLTKTVVYSTDSEHRLD 216 Query: 188 -NAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES---------------LKKIELIN 231 + D +I DA+ +SL+E+ ++ + Sbjct: 217 NPGEHEAFVAFFAKADLVIFDAM--------YSLAEAVSVKADWGHSSNVVGVELCQAAA 268 Query: 232 PKNAILTHMHVDLDYDMVL-----------------KSTPSRVVPAFDGMQF 266 K +L H + +D P ++ A+DG+ Sbjct: 269 AKRLVL--FHHEPVHDDKQLARLVAETRRLEQITRGSRAPLEIISAYDGLAI 318 >gi|328957203|ref|YP_004374589.1| ribonuclease J1 [Carnobacterium sp. 17-4] gi|328673527|gb|AEB29573.1| ribonuclease J1 [Carnobacterium sp. 17-4] Length = 594 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI GI FL + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNIHKVKALVITHGHEDHIGGIP-----FLLR 89 Query: 103 KRPIDVYAAPDCMKHLFES 121 + I +YA P + Sbjct: 90 QANIPIYAGPLASALIRNK 108 >gi|302038497|ref|YP_003798819.1| putative ribonuclease Z [Candidatus Nitrospira defluvii] gi|300606561|emb|CBK42894.1| putative Ribonuclease Z [Candidatus Nitrospira defluvii] Length = 339 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 9/122 (7%) Query: 50 RGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R S ++ D G + ++LR + +H H DH G D L L + + + Sbjct: 24 RWSKRALLFDLGHNDALGPTRLLRAG-----DIFISHTHMDHFIGFDTLLRVALGRGKTL 78 Query: 107 DVYAAPDCMKHLF-ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 +Y P + ++ + Y + +D V + N + + G +P Sbjct: 79 RLYGPPGLIANVQGKLHGYTWNLVDGYPLTITVQEFHEQTNQGATFLATDGFQRHDVPAP 138 Query: 166 QQ 167 Sbjct: 139 SP 140 >gi|283768842|ref|ZP_06341753.1| conserved hypothetical protein [Bulleidia extructa W1219] gi|283104628|gb|EFC06001.1| conserved hypothetical protein [Bulleidia extructa W1219] Length = 613 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 49/188 (26%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++ VI+D G PDF L + I A++ TH H DHI GI Sbjct: 53 EHNDEIVIIDCGVLFPQNELLGVDYVIPDF--SYLVKNQTKIKAMVITHGHEDHIGGI-- 108 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVPIC 151 +FLK R ++YA + + K L++ + I I+++ + Sbjct: 109 --PFFLKTIRLKEIYAPRFAKRLIE-------KKLEEHRLTRVCKIIEIDSDSSINTKYF 159 Query: 152 MKSAGGVIEAIP------ILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQ----- 199 + +IP I +GRI G F+F Y +K+ Sbjct: 160 NIGFFDTVHSIPDSLGVLINTPNGRIVETGDFKFD---YSPVGK---PSDFQKMAYVGQI 213 Query: 200 NLDFLIID 207 +D L+ D Sbjct: 214 GVDLLLSD 221 >gi|158320256|ref|YP_001512763.1| beta-lactamase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140455|gb|ABW18767.1| beta-lactamase domain protein [Alkaliphilus oremlandii OhILAs] Length = 288 Score = 46.7 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 88/232 (37%), Gaps = 25/232 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N T+++D G + + ++ ID ++ THPH+DHI G+ + Sbjct: 46 SILIVTPH----NKTILIDAGEYREGRRVKAYLRKHRINKIDLLIGTHPHSDHIGGLAEI 101 Query: 96 RGYFLKQKRPID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIE--NNDVPICM 152 F + + + ++L + + ++ I +P + + D I + Sbjct: 102 IHNFKVDQIVMPRTFHNSTTFENLLMAI--------ESSHLKINSPELHKKIQFDEDIQL 153 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNG 212 + G + E L + L ++ + + D+ L + ++ + L G Sbjct: 154 QFLGPLKEYGDHLNLWSIVLRLEYKNQSFLFTGDMEKEAEMDLLNFYDEKSMVANVLNIG 213 Query: 213 LHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPSRVVPAF 261 H S S S + +NP+ A+++ + + V++ V + Sbjct: 214 HHGS--DTSTSEGFLNTVNPEIALISAGKNNAYGHPHPEVIQRLKEHQVWIY 263 >gi|291296595|ref|YP_003507993.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290471554|gb|ADD28973.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 225 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 65/201 (32%), Gaps = 38/201 (18%) Query: 50 RGSNTTVIVD-TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-- 106 T ++VD L + D V+ TH H DH + PI Sbjct: 15 SDGTTRILVDPFLTGNPKAALSADQVEADLVVLTHAHGDHYG---DSVAISQRTGAPIIS 71 Query: 107 --DV--YAAPDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 ++ YA K + + Y FK + +P + + GG+ + Sbjct: 72 NYEIVSYAEKQGAKGVGMNLGGTYRFKGGWLKWFPAW--------HSSSFPDGTYGGLAQ 123 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 + + R+ G D F +L +LD ++ HF++ Sbjct: 124 GLVLELGGKRLYIAG----------DTALFSDMTLVAQYSLDLAVL------PIGDHFTM 167 Query: 221 --SESLKKIELINPKNAILTH 239 ++LK +EL K + H Sbjct: 168 GPDDALKALELTRAKQVLPVH 188 >gi|205373919|ref|ZP_03226721.1| beta-lactamase domain-containing protein [Bacillus coahuilensis m4-4] Length = 303 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 18/148 (12%) Query: 52 SNTTVIVDTGPDFY-----MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++DTG D + L++ +D + TH HADHI G + +K + Sbjct: 25 EGKGILIDTGIDKSSVKKVLSYLKKHNFPLDYCILTHSHADHIGGFPEIL-----KKSKV 79 Query: 107 DVYAAPD-----CMKHLFESFRYCFKALDDRTYPPIVN-PIVIENNDVPICMKSAG--GV 158 + +A L + + + P + E+ I + G Sbjct: 80 ECWAPEFEKSLMVQTRLEPIYLWNGAEPLQSLRSKFLEAPSIPEDCLTSISEEGIIRMGP 139 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTD 186 E + +G + +V + +D Sbjct: 140 FELTVYFLKGHSYQQIGVLYEDVLFASD 167 >gi|297191689|ref|ZP_06909087.1| metallo-beta-lactamase family hydrolase [Streptomyces pristinaespiralis ATCC 25486] gi|197721455|gb|EDY65363.1| metallo-beta-lactamase family hydrolase [Streptomyces pristinaespiralis ATCC 25486] Length = 561 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 23/149 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF------ 122 +R+++ ID ++ TH H DHI G+ + L+ K I + + + + Sbjct: 70 IRDRLDDIDGIVLTHGHEDHIGGV----PFLLRLKPDIPLIGSKLTLALIEAKLQEHRIR 125 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV 181 Y + + + P E V + A A+ I G + G F+ + Sbjct: 126 PYTLEVTEGHR--ERIGPFDCEFIAVNHSIPDAL----AVAIRTPAGMVVHTGDFKMDQL 179 Query: 182 ---AYCTDVNAFPAESLEKLQNLDFLIID 207 TD++AF S E +D L+ D Sbjct: 180 PLDGRLTDLHAFARLSEE---GIDLLLSD 205 >gi|163790345|ref|ZP_02184777.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] gi|159874416|gb|EDP68488.1| metallo-beta-lactamase superfamily protein [Carnobacterium sp. AT7] Length = 556 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI GI FL + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNIHKVKALVITHGHEDHIGGIP-----FLLR 89 Query: 103 KRPIDVYAAPDCMKHLFES 121 + I +YA P + Sbjct: 90 QANIPIYAGPLASALIRNK 108 >gi|313811610|gb|EFS49324.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313831353|gb|EFS69067.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313834963|gb|EFS72677.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|314974227|gb|EFT18323.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976662|gb|EFT20757.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314984470|gb|EFT28562.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|315095367|gb|EFT67343.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|327328371|gb|EGE70133.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA2] gi|327444155|gb|EGE90809.1| hypothetical protein HMPREF9571_02286 [Propionibacterium acnes HL043PA2] gi|327444964|gb|EGE91618.1| hypothetical protein HMPREF9570_02026 [Propionibacterium acnes HL043PA1] gi|328760124|gb|EGF73703.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL099PA1] Length = 557 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 32 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 87 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 88 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHESDVAEVGEQFDLEFIAVNHS 147 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 148 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 198 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 199 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 >gi|118395625|ref|XP_001030160.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila] gi|89284452|gb|EAR82497.1| metallo-beta-lactamase superfamily protein [Tetrahymena thermophila SB210] Length = 797 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 32/112 (28%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 LG G+ +P + RT S++ I + +++D G Sbjct: 440 SNSKIVFLGTGS--MIPLPS--------------RTVSAILIE-----NNKNNILLDCGE 478 Query: 63 DFYMQVL--------REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 Y Q+L ++ + + +H H DH G+ + K+ + I Sbjct: 479 GTYSQILYQYGVEKSKQIIKDTKFIFISHIHLDHCLGLF---YFLFKRDQII 527 >gi|55821746|ref|YP_140188.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55737731|gb|AAV61373.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] Length = 560 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V + A++ TH H DHI GI FL + Sbjct: 37 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRVKALVVTHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y N + + + Sbjct: 92 QANIPIYAGPLALALIKGKLEEHGLLRDAQLYEINANTELTFKNMSVTFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 152 GIVIHTP----QGKIVCTGDFKFD 171 >gi|325284382|ref|YP_004256922.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324316446|gb|ADY27559.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 526 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 49/191 (25%) Query: 52 SNTTVIVDTGPDFYMQVL-REQVLSID--------AVLYTHPHADHIHGIDGLRGYFLKQ 102 + +++D G ++ + +D AV+ TH H DH+ + L++ Sbjct: 24 TEGRLLIDAG--LRPGMIGDAALPQLDVLNDAPPGAVILTHAHLDHVSAL----PVVLRR 77 Query: 103 KRPIDVYAAPDCMK----------HLFESFRYCFKALDD-----RTYPPIVNPIVIENND 147 + +Y P + E+ + +D + P+ I ++ Sbjct: 78 YPKLHIYCTPATAHLAALTLADSLRIMEAQGQMLYSPEDMKRTFEAFRPVEYFQRIADHG 137 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + +G ++ A +L + G V + DV+ ++D Sbjct: 138 FAFTLYPSGHLLGAASVLIESSA--------GTVFHTGDVSNVSTP-----------VVD 178 Query: 208 ALKNGLHSSHF 218 A +H Sbjct: 179 AAWMPPRKTHA 189 >gi|302557415|ref|ZP_07309757.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] gi|302475033|gb|EFL38126.1| metallo-beta-lactamase [Streptomyces griseoflavus Tu4000] Length = 554 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I AV+ TH H DHI G+ Y L+++ I V + + L Sbjct: 63 IRDRLDDIVAVVLTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFLD-------AK 111 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 L + P V + A G + + H SL R G V + Sbjct: 112 LKEHGIRP-------RGVRVREGDRRAFGPFDCEFVAVNHSIPDSLAVAIRTRAGLVLHT 164 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 165 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 224 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 225 APRRVIVSSFASHVH 239 >gi|238916714|ref|YP_002930231.1| hypothetical protein EUBELI_00776 [Eubacterium eligens ATCC 27750] gi|238872074|gb|ACR71784.1| Hypothetical protein EUBELI_00776 [Eubacterium eligens ATCC 27750] Length = 556 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 18/80 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F + L+E + + + TH H DHI I Y Sbjct: 30 DDSIIVVDCGLSFPEEDMLGIDLVIPDVTYLKENLNKVKGFVITHGHEDHIGAI----PY 85 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 LK + +YA M + Sbjct: 86 VLKDVN-VPIYATKLTMGLI 104 >gi|195432681|ref|XP_002064345.1| GK20116 [Drosophila willistoni] gi|194160430|gb|EDW75331.1| GK20116 [Drosophila willistoni] Length = 293 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG + Q VLR++ SI ++ TH H DH+ G+ + G + Sbjct: 38 GKKRILIDTGDENVPQYIEHLNGVLRQEQASIGTIILTHWHHDHVGGVKDIVG-SKLVDK 96 Query: 105 PIDVYAAPDCMK 116 VY Sbjct: 97 DCQVYKYKRTDD 108 >gi|195109795|ref|XP_001999467.1| GI23051 [Drosophila mojavensis] gi|193916061|gb|EDW14928.1| GI23051 [Drosophila mojavensis] Length = 754 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 36/185 (19%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +++D G P+F ++ R QV ++DAVL +HP H+ + L G K Sbjct: 26 DDVRILLDCGWDEKFDPNFIKELKR-QVHTLDAVLLSHPDVYHLGALPYLVG---KLGLN 81 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC------------MK 153 +YA K + + F Y Y + +++ D +K Sbjct: 82 CPIYATIPVFK-MGQMFMYDLYMSHFNMY--DFDLFSLDDVDTAFEKITQLKYNQTVSLK 138 Query: 154 SAGGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVN-----AFPAESLEKLQNLDF 203 G I P+ H G + + + G ++ Y D N L++LQ Sbjct: 139 GKGYGISITPLSAGHMIGGTVWKI-VKVGEEDIIYAVDFNHKKERHLSGCELDRLQRPSL 197 Query: 204 LIIDA 208 LI DA Sbjct: 198 LITDA 202 >gi|150005115|ref|YP_001299859.1| ribonuclease Z [Bacteroides vulgatus ATCC 8482] gi|166991095|sp|A6L3H3|RNZ_BACV8 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|149933539|gb|ABR40237.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 309 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 87/295 (29%), Gaps = 77/295 (26%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHPH 85 C P R +S ++ ++D G MQ+ + ++ ++ + +H H Sbjct: 11 CGSALPTTRHFATSQVVNI-----REKLFMIDCGEGAQMQLRKSKLKFTRLNHIFISHLH 65 Query: 86 ADHIHGIDGLRGYFLKQKRPIDVY--AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ GL F R +Y + + L + K + + Sbjct: 66 GDHCFGLMGLISTFGMLGRTATLYIHCHAELERLLTPQLDFFCKGMSYKVV-----FQTF 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF------------------------- 178 + I IE IP+ RI + GF F Sbjct: 121 DPGKAEIIYDDRSLTIETIPLRH---RIPTCGFLFSEKQIPAHIRRDMIDFYEIPVYELN 177 Query: 179 ------------GNVA----------------YCTDVNAFPAESLEKLQNLDFLIIDALK 210 G + YC+D P +E++ +D L +A Sbjct: 178 RIKNGADYTLPDGKIVPNNKLTIPSALPRRYAYCSDTIYLP-HIIEQIYGVDLLFHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVP 259 + H + S++ + K ++ H + + +L S + P Sbjct: 237 AQSEQARAKETFHTTASQAGEIARTAKVKQLLIGHFSARYEDESILLQEASDIFP 291 >gi|55823666|ref|YP_142107.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] gi|55739651|gb|AAV63292.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] Length = 560 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 50/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V + A++ TH H DHI GI FL + Sbjct: 37 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRVKALVVTHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y + + + + Sbjct: 92 QANIPIYAGPLALALIKGKLEEHGLLRDAQLYEINADTELTFKNMSVTFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 152 GIVIHTP----QGKIVCTGDFKFD 171 >gi|304436888|ref|ZP_07396852.1| DNA internalization-related competence protein ComEC/Rec2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370087|gb|EFM23748.1| DNA internalization-related competence protein ComEC/Rec2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 814 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 57/198 (28%), Gaps = 28/198 (14%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +D + +H H DH G + + V Y Sbjct: 591 LLHYGVREVDYIFLSHAHEDHAAGAGAILS-------RLPV---KHVYTADEGRHAYAMS 640 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI------PILQQHGRISSLGFRF--G 179 P + E + G +E I P G S +R G Sbjct: 641 MRLGDANPLLSKLSRAEAGE---TFVLDGVTVEVIYAPARDPSDNATGNEVSNVYRIRYG 697 Query: 180 NVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + ++ + L+ L D LK H SH S SE + I ++P A+ Sbjct: 698 DASFLFTGDLVREHELKMLSAGTDA-SATVLKIPHHGSHTSSSE--EFIRAVHPMYAVYC 754 Query: 239 ---HMHVDLDYDMVLKST 253 + V++ Sbjct: 755 VGAGNSFGHPHADVVERY 772 >gi|298529119|ref|ZP_07016522.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] gi|298510555|gb|EFI34458.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira thiodismutans ASO3-1] Length = 552 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 34/158 (21%) Query: 52 SNTTVIVDTGPDF-------------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 T V++D G F + + + A++ TH H DHI + L Y Sbjct: 29 PGTMVLIDCGLMFPDDFLLGVDVVIPRFDYVLKNREKLKAIILTHGHEDHIGALPWLLPY 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 VY + +K + R F L+ + + ++ P+ + Sbjct: 89 V-----DAPVYGSRFTLKLVENKLR-EFNLLEYTR-------LEVMDHKTPLQVD----D 131 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA 192 + H I G G + + D P Sbjct: 132 LTFNFFQVCHSIIEGFGIGIETPVGRIVHTGDFKLDPE 169 >gi|111225096|ref|YP_715890.1| metallo-beta-lactamase family hydrolase [Frankia alni ACN14a] gi|111152628|emb|CAJ64369.1| putative hydrolase of the metallo-beta-lactamase superfamily [Frankia alni ACN14a] Length = 561 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 PDF +R+++ IDA++ TH H DHI + Y L+++R I + + L Sbjct: 65 PDF--TAIRDRLADIDALILTHAHEDHIGAV----PYLLRERRDIPIVGTRLTLALL 115 >gi|116628467|ref|YP_821086.1| mRNA degradation ribonuclease J1/J2enzyme [Streptococcus thermophilus LMD-9] gi|116101744|gb|ABJ66890.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Streptococcus thermophilus LMD-9] gi|312279088|gb|ADQ63745.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Streptococcus thermophilus ND03] Length = 560 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 50/144 (34%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L E V + A++ TH H DHI GI FL + Sbjct: 37 IIVDAGIKFPEDDLLGIDYVIPDYSYIVENVDRVKALVVTHGHEDHIGGIP-----FLLK 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + D + Y + + + + Sbjct: 92 QANIPIYAGPLALALIKGKLEEHGLLRDAQLYEINADTELTFKNMSVTFFRTTHSIPEPL 151 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 G++ P G+I G F+F Sbjct: 152 GIVIHTP----QGKIVCTGDFKFD 171 >gi|311898702|dbj|BAJ31110.1| hypothetical protein KSE_53350 [Kitasatospora setae KM-6054] Length = 561 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 25/156 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ +D ++ TH H DHI + Y L++ I + + + + Sbjct: 65 PDF--SYIRDRLDKVDGIILTHGHEDHIGAV----PYLLRENPDIPLIGSKLTLALIEA- 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG 175 K + R +P ++ + + + V +IP + G + + G Sbjct: 118 -----KLAEHRIHPYVLEVVEGDRERIGPFDCQFIAVNHSIPDALAVAVRTPAGMVVATG 172 Query: 176 -FRFGNV---AYCTDVNAFPAESLEKLQNLDFLIID 207 F+ + TD+ AF + E +D L++D Sbjct: 173 DFKMDQLPLDGRLTDLPAFAKLAEE---GMDLLLVD 205 >gi|315053985|ref|XP_003176367.1| metallo-beta-lactamase superfamily protein [Arthroderma gypseum CBS 118893] gi|311338213|gb|EFQ97415.1| metallo-beta-lactamase superfamily protein [Arthroderma gypseum CBS 118893] Length = 294 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 54 TTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++DTG Q L + ++ L TH H DH+ G+ LR + + Sbjct: 44 KRLLIDTGEGKPSWSVALQQTLNTERATVSHALLTHWHHDHVGGVRDLRRICPEVQ 99 >gi|257093273|ref|YP_003166914.1| beta-lactamase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045797|gb|ACV34985.1| beta-lactamase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 311 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 41 SLKISRVSERGSNTTVIVDTG--PDFYMQ---------VLREQVLSIDAVLYTHPHADHI 89 S + + G ++ DTG PD+ + +L+E I+A++ +H H DH Sbjct: 66 SALLEAETTDGKVRRLLFDTGWNPDWMDRRFAEEGIDRLLQEG--RIEALIVSHEHFDHF 123 Query: 90 HGIDGLRGYFLKQKRPIDVYAAP 112 GI G L+ + +Y Sbjct: 124 WGI----GSTLRHCPAMPIYLPE 142 >gi|56697598|ref|YP_167967.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3] gi|56679335|gb|AAV96001.1| metallo-beta-lactamase family protein [Ruegeria pomeroyi DSS-3] Length = 555 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 35/181 (19%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + + G ++VD G F LRE V ++AV TH H D Sbjct: 21 AYVYGYGKPGKERLILVDMGVAFSDMDTTPGVDLIWADISWLRENVDRLEAVFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + Q R ++A P + Sbjct: 81 HVGAVAH----TYDQLRK-PIHARAFTANIARRKMS--------ELGLPEQAVQTVSAWP 127 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDF 203 + G + H S G + + D P+ + + + + Sbjct: 128 EQV----QAGPFTVGFLPVSHSVPESAALVIDTPAGRIVHSGDFKLDPSPVVGEAFDPEL 183 Query: 204 L 204 Sbjct: 184 W 184 >gi|89070153|ref|ZP_01157482.1| metallo-beta-lactamase family protein [Oceanicola granulosus HTCC2516] gi|89044270|gb|EAR50416.1| metallo-beta-lactamase family protein [Oceanicola granulosus HTCC2516] Length = 551 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 30/154 (19%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHADH 88 + G ++VD G F L E+ I+ + TH H DH Sbjct: 17 YVYGYGAPGRERLIVVDLGVTFPDMDTTPGVDLILPDIAWLAERRDRIEGIFITHAHEDH 76 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + + L + + +YA L++ IV+P + Sbjct: 77 VGAVGHL-----HSRLDVPIYARAFTANIARRK-------LEEYG---IVDPAAVRTVSA 121 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 + G E + H S G A Sbjct: 122 -WPETVSLGPFEVGFLPVSHSIPESAGMVIDTAA 154 >gi|315426740|dbj|BAJ48364.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 467 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 29/156 (18%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 +E +AV+ TH H DH LR I +Y + Sbjct: 83 KEGTPFAEAVVITHGHLDHYGHASLLRP-------DIPLYMGETTRLLIQAR-------E 128 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLGFRF----GNVA 182 + + P E + V + + V E P+ H ++ G G +A Sbjct: 129 NTKQKSPENLFNKNEEHPVEVFRTGSKLVFEDAIIYPVHVDHSIPAAYGLVIETGEGVLA 188 Query: 183 YCTDV------NAFPAESLEKL--QNLDFLIIDALK 210 Y D+ + + +EK N++ L+I+ + Sbjct: 189 YTGDLRMHGPKSEMTHDFVEKCVKMNVETLVIEGTR 224 >gi|304385130|ref|ZP_07367476.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] gi|304329324|gb|EFL96544.1| metallo-beta-lactamase superfamily protein [Pediococcus acidilactici DSM 20284] Length = 567 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + YFLK+ + V+ + + + Sbjct: 51 PDF--SYLVENKDRIVGVFLTHGHADAIGAL----PYFLKEIE-VPVFGSEMTIALAKIT 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 DD N V++ + G + H SLG Sbjct: 104 ------VNDDPDLRKFKNFHVVDEKK-----EIDFGDVTVSFFKTTHTIPDSLGIVLDCD 152 Query: 179 -GNVAYCTDVN 188 G + Y D Sbjct: 153 EGRIVYTGDFK 163 >gi|270291417|ref|ZP_06197639.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus acidilactici 7_4] gi|270280263|gb|EFA26099.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus acidilactici 7_4] Length = 567 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I + YFLK+ + V+ + + + Sbjct: 51 PDF--SYLVENKDRIVGVFLTHGHADAIGAL----PYFLKEIE-VPVFGSEMTIALAKIT 103 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF--- 178 DD N V++ + G + H SLG Sbjct: 104 ------VNDDPDLRKFKNFHVVDEKK-----EIDFGDVTVSFFKTTHTIPDSLGIVLDCD 152 Query: 179 -GNVAYCTDVN 188 G + Y D Sbjct: 153 EGRIVYTGDFK 163 >gi|195176180|ref|XP_002028709.1| GL22417 [Drosophila persimilis] gi|194111316|gb|EDW33359.1| GL22417 [Drosophila persimilis] Length = 292 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 35/186 (18%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG + Q VLR + I ++ TH H DH+ G+ + G Sbjct: 38 GKKRILIDTGDEDVPQYIEHLNDVLRREQACIATIILTHWHHDHVGGVKDIVG------- 90 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV---IENNDVPICMKSAGGVIEA 161 + + F+ F D P + + +N+ ++ A + Sbjct: 91 -------SRLADNDCQVFK--FSRTDASDVCPEIPAHIKLQPMSNNQEFSVEGANMRVVH 141 Query: 162 IPILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL---HSS 216 P + ++ G F + A + E ++ LD + LK Sbjct: 142 TPGHTTDHIVLAMDEGTLFSGDCILGEGTAVFEDLYEYMKTLDTI----LKIEPQRIFPG 197 Query: 217 HFSLSE 222 H ++ E Sbjct: 198 HGNIIE 203 >gi|187761556|dbj|BAG31977.1| hypothetical protein [Mycobacterium intracellulare] Length = 219 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 12/116 (10%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 VIVD G D L +++ +D AVL TH H DH+ G L+ + I Sbjct: 28 PGRCVIVDPGLDSAS--LEKKLNDLDWAPEAVLCTHGHFDHVGG-----AAQLQSQHHIP 80 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 VY +K S + A + + VIE D + + ++P Sbjct: 81 VYLCAADIKAAKMS-NFMMAAFKIEKRIELPDFQVIEGEDSRLECGGRSFLFHSVP 135 >gi|116872341|ref|YP_849122.1| putative secreted lipoprotein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741219|emb|CAK20341.1| putative secreted lipoprotein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 376 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S + + TTV++DTG ++L ++ ID +L THPHADHI D + Sbjct: 51 STLIQAKDGTTVLIDTGRQDDDRILSYLKEAKIKKIDLLLLTHPHADHIGNADK----VI 106 Query: 101 KQKRPIDVYAAPDC 114 +P +++ Sbjct: 107 ATYKPKEIWMDGLT 120 >gi|325286665|ref|YP_004262455.1| hypothetical protein Celly_1760 [Cellulophaga lytica DSM 7489] gi|324322119|gb|ADY29584.1| hypothetical protein Celly_1760 [Cellulophaga lytica DSM 7489] Length = 331 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 12/95 (12%) Query: 7 FTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 ILG G P+I C TNP R SL + + + T + + PD Sbjct: 48 LIILGTVQDAGSPQIGCKKDCCKNLFTNPDPNRKVVSLGV---VDNQNKATFLFEATPDI 104 Query: 65 YMQ--VLRE----QVLSI-DAVLYTHPHADHIHGI 92 Q L+ I + TH H H G+ Sbjct: 105 ATQVKALKNSANFNAQEIPTGIFLTHAHIGHYAGL 139 >gi|322516662|ref|ZP_08069575.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] gi|322124827|gb|EFX96254.1| metallo-beta-lactamase superfamily protein [Streptococcus vestibularis ATCC 49124] Length = 553 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q + V+ + ++ L + F Sbjct: 55 LIENRDRIQGIFLTHGHADAIGALP-----YILQDVKVPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + N VI+ + I + A LG GN+ Y D Sbjct: 103 VKNAGVKKFNNFHVIDA-ETEIEFEDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFK 161 >gi|14591202|ref|NP_143278.1| mRNA 3'-end processing factor, putative [Pyrococcus horikoshii OT3] gi|294979445|pdb|3AF5|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404 From Pyrococcus Horikoshii gi|294979446|pdb|3AF6|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404 From Pyrococcus Horikoshii Complexed With Rna-Analog gi|3257827|dbj|BAA30510.1| 651aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 651 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 66/202 (32%), Gaps = 44/202 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + V+VD G P+F VLRE + +DA++ Sbjct: 202 RSALLVQT-----DESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQY-VLREGL--LDAII 253 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH + L Y L +Y P + + + P+ P Sbjct: 254 ITHAHLDHCGMLPYLFRYNLFDG---PIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRP 310 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVNA 189 I+ G V + P ++ H LG N+A D Sbjct: 311 RDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGNGLHNIAITGDFKF 370 Query: 190 FP----AESLEKLQNLDFLIID 207 P + K L+ L+++ Sbjct: 371 IPTRLLEPANAKFPRLETLVME 392 >gi|114566794|ref|YP_753948.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337729|gb|ABI68577.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 553 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 18/79 (22%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R ++ VI+D G F + L E + A+L TH H DH+ G+ Sbjct: 26 RYQDSIVIIDAGLMFPEEELLGIDIVIPDISYLMENKDKVKAILLTHGHEDHVGGL---- 81 Query: 97 GYFLKQKRPIDVYAAPDCM 115 Y LK+ + VY + + Sbjct: 82 PYVLKEIN-VPVYGSRLTL 99 >gi|319934895|ref|ZP_08009340.1| beta-lactamase [Coprobacillus sp. 29_1] gi|319810272|gb|EFW06634.1| beta-lactamase [Coprobacillus sp. 29_1] Length = 601 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 41/125 (32%), Gaps = 22/125 (17%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYCFK 127 L+ I A+L TH H DHI GI FL Q I +YA+P + Sbjct: 103 LKRNQKKIKALLITHGHEDHIGGIP-----FLLQVVHIPFIYASPLACAMIRRK------ 151 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAY 183 L++R + I+N G + H SLG G V Sbjct: 152 -LEERRLTQATKLVQIDNLYQIKTKHFNIGFFK-----TNHSIPESLGIIVNTPNGRVVA 205 Query: 184 CTDVN 188 D Sbjct: 206 TGDFK 210 >gi|154500576|ref|ZP_02038614.1| hypothetical protein BACCAP_04249 [Bacteroides capillosus ATCC 29799] gi|150270465|gb|EDM97774.1| hypothetical protein BACCAP_04249 [Bacteroides capillosus ATCC 29799] Length = 531 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 30/127 (23%), Gaps = 51/127 (40%) Query: 5 YHFTILG-----CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVD 59 T G G+ C ++VD Sbjct: 1 MKLTFFGAAKAVTGS--------CHCVEC-----------------------GGKRILVD 29 Query: 60 TG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 G + L IDAV+ TH H DH + +KQ +Y Sbjct: 30 CGLQQGRDEQDNSR---LDFTPGYIDAVVVTHAHIDHSGRL----PLLVKQGFDGPIYCT 82 Query: 112 PDCMKHL 118 + L Sbjct: 83 RLTAQLL 89 >gi|172063931|ref|YP_001811582.1| beta-lactamase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171996448|gb|ACB67366.1| beta-lactamase domain protein [Burkholderia ambifaria MC40-6] Length = 287 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Query: 44 ISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADHIHGID 93 I+ RG+ TV+VDTG + + ID +L TH H DHI G+ Sbjct: 60 INCYVIRGNGRTVLVDTGAGGIRNWGGRLRASLTHAGIDASDIDTILLTHAHPDHIGGLL 119 Query: 94 G 94 Sbjct: 120 D 120 >gi|313636839|gb|EFS02466.1| metallo-beta-lactamase family protein [Listeria seeligeri FSL S4-171] Length = 190 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I+D G + + ++ ++ A+L TH H DHI ++ +R + I Sbjct: 7 DGLALIIDPGAE--ANKIEAEIAKLEVTPVAILLTHCHYDHIGALEEIRATY-----SIP 59 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 VY +P L + P + P E ++ + P Sbjct: 60 VYVSPKEQSWLSS--PELNLSAHIAGTPIVARPAEHEFTLGDYNIEGFHFKVVPTP---G 114 Query: 168 HGRISSLGFRFGNVAYCTD 186 H I SL F F + D Sbjct: 115 HS-IGSLSFIFTDFVIVGD 132 >gi|303242557|ref|ZP_07329035.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] gi|302589919|gb|EFL59689.1| beta-lactamase-like protein [Acetivibrio cellulolyticus CD2] Length = 414 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 30/208 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLR-----EQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I N +++D G + ++ + + I V+ THPH DH+ G+D + Sbjct: 92 SILIQTP----ENKAMLIDAGENDDGNLVTSYIKSQGINKISVVVGTHPHEDHLGGLDTV 147 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 F +K +Y K ++F + A+ ++ + V + S Sbjct: 148 INNFSIEK----IYMPKVSSKS--DAFEDVWAAIRNKGL-----TVTTAKAGVNVNFDST 196 Query: 156 GGVIEAIP------ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 P + + + + + + + D + + + +D L D L Sbjct: 197 LKTEILAPNKDSYDDINNYSAVIKMTYNNTSFLFTGDSESISEKEMLS-AGID-LKADVL 254 Query: 210 KNGLHSSHFSLSESLKKIELINPKNAIL 237 K G H S +S +L ++ ++PK A++ Sbjct: 255 KVGHHGSGYSTG-AL-FLKKVSPKYAVI 280 >gi|225431465|ref|XP_002274308.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 552 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 53/174 (30%), Gaps = 48/174 (27%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH GI Y +Y+ + + + LDD + I Sbjct: 27 FLTHAHKDHSSGISTHSAY--------PIYSTHLTKTLILQQYP----QLDDSLFVGI-- 72 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGNVAYCTDVNAFPAESL 195 + + G H + + F FGN+ + D P Sbjct: 73 -----EVGQSMVVDDPDGRFGVTAFDANHCPGAVM-FLFEGDFGNILHTGDCRLIPE--- 123 Query: 196 EKLQNL----------------DFLIIDAL--KNGLH--SSHFSLSESLKKIEL 229 LQNL D++ +D ++ LH S H ++ + + I Sbjct: 124 -CLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWK 176 >gi|315158441|gb|EFU02458.1| conserved hypothetical protein [Enterococcus faecalis TX0312] Length = 565 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 21/135 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L K + V+ ++ Sbjct: 58 LEENSERIAGVFLTHGHADAIGALP-----YLLSKIQVPVFGTELTIELAK------LSV 106 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + VI+ + + G H S+G GN+ Y Sbjct: 107 NSHAETKKFKDFHVIDPH-----TEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYT 161 Query: 185 TDVNAFPAESLEKLQ 199 D F ++E Q Sbjct: 162 GDFK-FDQSAIEMYQ 175 >gi|226306220|ref|YP_002766180.1| hypothetical protein RER_27330 [Rhodococcus erythropolis PR4] gi|226185337|dbj|BAH33441.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 530 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 20/117 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ ++AV+ TH H DHI + + L+ + I V A + + Sbjct: 32 PDFRY--IEDRMDDVEAVILTHGHEDHIGAL----PFLLRLRADIPVIGAKFTLALVAA- 84 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + P ++E + G + H +L Sbjct: 85 ----------KCREHRLRPNLVEVVEGNTTTH---GPFDCEYFAVNHSIPDALAIAI 128 >gi|329889345|ref|ZP_08267688.1| RNA-metabolising metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] gi|328844646|gb|EGF94210.1| RNA-metabolising metallo-beta-lactamase family protein [Brevundimonas diminuta ATCC 11568] Length = 558 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 41/147 (27%), Gaps = 34/147 (23%) Query: 47 VSERGSNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGI 92 +IVD G F Q + E +L ++ TH H DHI + Sbjct: 30 FGPAHDRKWIIVDVGVTFGDQSTPGVDVIVPDPTFLEGENIL---GIVLTHAHEDHIGAL 86 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L + +YA P + E R D +E ++ P+ Sbjct: 87 GWLWP-----RIQAPLYATPFTAFLIREKLRDAGIYED------------VELHEAPLGS 129 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFG 179 G E + H G Sbjct: 130 TVNLGPFEVTYVTITHSIAEPNGLAIK 156 >gi|329965100|ref|ZP_08302069.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] gi|328523928|gb|EGF51006.1| metallo-beta-lactamase domain protein [Bacteroides fluxus YIT 12057] Length = 205 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 10/143 (6%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 G + V++D G Q ++E+ ++ A+ TH H DHI+GI L L+ V Sbjct: 21 EGKDGLVLIDIGDITPIKQFVQEKGGTVQALFLTHTHYDHIYGIKDL----LRSYPNCMV 76 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 Y + + L + +D N V+ ND + P H Sbjct: 77 YTSSFGKEALGSDKLNFSRYHNDPVIWVGDNVTVLHENDKVEIFPGIFVEVFETP---GH 133 Query: 169 GRISSLGFRFGNVAYCTDVNAFP 191 + S L ++ N + D + P Sbjct: 134 DK-SCLTYKVENNVFSGD-SYIP 154 >gi|153810057|ref|ZP_01962725.1| hypothetical protein RUMOBE_00438 [Ruminococcus obeum ATCC 29174] gi|149834235|gb|EDM89315.1| hypothetical protein RUMOBE_00438 [Ruminococcus obeum ATCC 29174] Length = 266 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 79/259 (30%), Gaps = 53/259 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP-- 62 + T+LG G ++ + + + ++VD G Sbjct: 1 MNITMLGTGNAM---VTEC--------------YNTCFVLE-----DGDKHLLVDGGGGN 38 Query: 63 DFYMQVLREQVLSID--AVLYTHPHADHIHGID-GLRGYFLKQK-----RPIDVYAAPDC 114 Q+ + D + TH H DHI G+ +R K +Y + Sbjct: 39 TLLRQLKQAGFDWKDMREIFVTHKHVDHIMGVVWMIRMICQNMKQGQYDGEATIYGHEEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 ++ L E + A ++ +V+ + + + G Q + Sbjct: 99 IRILKEMAEMLYPAKQTCFIGDRLHLVVVNDGEE---RELMGHKTTF--FDIQSTKAKQY 153 Query: 175 GFR--FGNVAYCTDVNAFP--AESLEKLQNLDFLIIDAL----------KNGLHSSHFSL 220 GF GN T P + +N +L+ +A H H + Sbjct: 154 GFCMDMGNGEKLTCCGDEPYNECEKKYAENSKWLLHEAFCLYDQADVFHPYEKH--HSTA 211 Query: 221 SESLKKIELINPKNAILTH 239 ++ + E + +N IL H Sbjct: 212 KDASELAEQLGVQNLILYH 230 >gi|323704901|ref|ZP_08116478.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535827|gb|EGB25601.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11] Length = 820 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 28/166 (16%) Query: 52 SNTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +++D G PDF Q+++E +D +L +H H DHI + L + Sbjct: 22 DGKNILLDCGIRMASGKDNLPDF--QLIQEN-GGVDVILISHAHMDHIGALPILSRIYPD 78 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-- 159 K +Y K ++ P I ++ I + G Sbjct: 79 AK----IYMTHAAKDLTRVLLYDSLKIMEREAEIPAYAEIHVKEMLNRIICHTPGHTFSP 134 Query: 160 ------EAIPILQQHGRISSLGFRFGN---VAYCTDVNAFPAESLE 196 + H ++ + GN Y D + F ++E Sbjct: 135 FLDSDLKVTFYSAGHIAGAASTYIVGNEGSFFYSGDFSRFRQNTIE 180 >gi|322374745|ref|ZP_08049259.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] gi|321280245|gb|EFX57284.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C300] Length = 553 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENRDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + VI+ + + G E H SLG G++ Y Sbjct: 105 GND-AVKKFNDFHVIDED-----TEIDFGGTEVSFFRTTHSIPESLGVVLKTPKGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|269794647|ref|YP_003314102.1| ComEC/Rec2-like protein [Sanguibacter keddieii DSM 10542] gi|269096832|gb|ACZ21268.1| ComEC/Rec2-related protein [Sanguibacter keddieii DSM 10542] Length = 888 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Query: 47 VSERGSNTTVIVDTGP--DFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 V + G V++D GP D + L E V ++D ++ TH H DH+ G+ + Sbjct: 638 VVQTGPGAAVMIDVGPAGDAAARCLDELGVTTLDLLVLTHFHHDHVGGLPEVLD 691 >gi|254876795|ref|ZP_05249505.1| arylsulfatase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842816|gb|EET21230.1| arylsulfatase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 322 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 39/225 (17%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPI 106 + V++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 62 DGKSKVLIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENL 121 Query: 107 DVYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPIC 151 +F Y L +P ++P+ I+ + Sbjct: 122 PFSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVTNIDYTKLEPT 181 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLD 202 + + G + +L ++ G + + + F ++ +N D Sbjct: 182 KVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNAD 241 Query: 203 FLII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 242 ILMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 283 >gi|241668262|ref|ZP_04755840.1| metallo-beta-lactamase superfamily protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 320 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 39/225 (17%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPI 106 + V++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 60 DGKSKVLIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENL 119 Query: 107 DVYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPIC 151 +F Y L +P ++P+ I+ + Sbjct: 120 PFSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVTNIDYTKLEPT 179 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLD 202 + + G + +L ++ G + + + F ++ +N D Sbjct: 180 KVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNAD 239 Query: 203 FLII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 240 ILMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|187935501|ref|YP_001886657.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723654|gb|ACD24875.1| metallo-beta-lactamase family protein [Clostridium botulinum B str. Eklund 17B] Length = 315 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 R ++ +++D GP Q+ ++ + + V+ THPH DHI G+ Sbjct: 81 RVNDFDILIDAGPRSEADHLLKQLEQKNIDDFEMVIATHPHEDHIGGM 128 >gi|325129367|gb|EGC52202.1| metallo-beta-lactamase domain protein [Neisseria meningitidis OX99.30304] Length = 210 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|325003684|ref|ZP_08124796.1| beta-lactamase-like protein [Pseudonocardia sp. P1] Length = 274 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 43/243 (17%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHA 86 C P + + S+ +S +T V++D GP + + +D ++ +H H Sbjct: 8 CRAAMPADGQASSAYLVST-----DSTRVLLDCGPGAVTALGAVSTPAALDGIVISHLHT 62 Query: 87 DHI---------------HGIDGLRGYFL----KQKRPIDVYAAP---DCMKHLFESFRY 124 DH G D RPI ++ ++ L F Sbjct: 63 DHCYDVLPLGKALLMSRMLGNDRFPTLPTAGPPPGDRPIPLHVPKGGRAALERLAAVFPI 122 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN---- 180 + DR + + E + + G + H +S+ G R + Sbjct: 123 PSRPELDRAFGAALEIREYEPGE-----ELTIGDCRVVLRPLHH-TMSNCGVRVTDPAGS 176 Query: 181 -VAYCTDVNAFPAESLEKLQNLDFLIIDA---LKNGLHSSHFSLSESLKKIELINPKNAI 236 + Y D + S E + D L+ ++ L + H S + + + + Sbjct: 177 SLVYSGDTSDVAGLS-ELARGADLLLCESTLELPDDTSDGHMSAARAGRVAAAAEVGQLV 235 Query: 237 LTH 239 LTH Sbjct: 236 LTH 238 >gi|226323919|ref|ZP_03799437.1| hypothetical protein COPCOM_01696 [Coprococcus comes ATCC 27758] gi|225207468|gb|EEG89822.1| hypothetical protein COPCOM_01696 [Coprococcus comes ATCC 27758] Length = 207 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 8/86 (9%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE-SFRYCFKALDDRTY 134 I A+L TH H DHI GID + + + VY ++ L S + +Y Sbjct: 49 IKAILLTHAHFDHIMGIDK----VIDRYGEMPVYVEESDLELLHTPSMNESTVYTNGYSY 104 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIE 160 P VI + DV + VI Sbjct: 105 PGGD---VIHDGDVLHLIGEDFRVIH 127 >gi|218282297|ref|ZP_03488593.1| hypothetical protein EUBIFOR_01175 [Eubacterium biforme DSM 3989] gi|218216712|gb|EEC90250.1| hypothetical protein EUBIFOR_01175 [Eubacterium biforme DSM 3989] Length = 207 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 14/138 (10%) Query: 52 SNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++ +I+D ++L + ++DA++ TH H DHI G+D + F DVY Sbjct: 21 NHHALIIDPADILPNLDEILNQNDCTLDAIVLTHAHFDHISGVDKIVNKFGC-----DVY 75 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 P F + + + ++ N I K+ E I Sbjct: 76 LNP-------NEFDFLLDPNLNSSSAFYMDVTCNANAKPLIEGKNEIAGFEVEAIYCPGH 128 Query: 170 RISSLGFRFGNVAYCTDV 187 I S + + + DV Sbjct: 129 SIGSTVLKIEDCLFTGDV 146 >gi|15829175|ref|NP_326535.1| hypothetical protein MYPU_7040 [Mycoplasma pulmonis UAB CTIP] gi|14090119|emb|CAC13877.1| conserved hypothetical protein [Mycoplasma pulmonis] Length = 631 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 36/188 (19%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFRYCFK 127 L++ I+ + TH H DHI GI +L Q+ I+ ++A +++L Sbjct: 55 LKKHEDQIEGIFVTHGHEDHIGGI-----IYLLQQVKINKIFAPKIAIEYLK-------Y 102 Query: 128 ALDDRTYPPIVNPIVI---ENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG-FR 177 L+DR V I I + + + + +IP + G + G FR Sbjct: 103 KLEDRGLRIKVEFIEIKKDDTHHLGSLVVDFWTAQHSIPDAFGIRVKTPDGSVLCTGDFR 162 Query: 178 FG--NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELI-- 230 + TD + E + K + L L+ D A++ S + LK IE I Sbjct: 163 IDYRPIGNYTDFSKL--EQIGK-EGLTLLLSDSTNAMRPNHSPSENDI---LKDIEKIML 216 Query: 231 NPKNAILT 238 K I+ Sbjct: 217 AAKRKIII 224 >gi|322385195|ref|ZP_08058842.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] gi|321270819|gb|EFX53732.1| metallo-beta-lactamase superfamily protein [Streptococcus cristatus ATCC 51100] Length = 211 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 50 RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++VD G D+ + L E I A+L TH H DHI +D +R F Sbjct: 19 ENDRHVIVVDPGSDWRKIQRKLEEIAKPITAILLTHTHYDHIMSLDKVRDNF----ANPP 74 Query: 108 VYAAP 112 VY A Sbjct: 75 VYVAE 79 >gi|167627687|ref|YP_001678187.1| metallo-beta-lactamase superfamily protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597688|gb|ABZ87686.1| metallo-beta-lactamase superfamily protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 320 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 39/225 (17%) Query: 51 GSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPI 106 + V++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 60 DGKSKVLIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENL 119 Query: 107 DVYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPIC 151 +F Y L +P ++P+ I+ + Sbjct: 120 PFSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVTNIDYTKLEPT 179 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLD 202 + + G + +L ++ G + + + F ++ +N D Sbjct: 180 KVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNAD 239 Query: 203 FLII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 240 ILMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|56460798|ref|YP_156079.1| hydroxyacylglutathione hydrolase GloB [Idiomarina loihiensis L2TR] gi|81363283|sp|Q5QZL0|GLO2_IDILO RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|56179808|gb|AAV82530.1| Probable hydroxyacylglutathione hydrolase GloB [Idiomarina loihiensis L2TR] Length = 253 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 43 KISRVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + +IVD G Q L + SI+ +L TH H DH GI L Sbjct: 13 YIWAIETNDKDKVIIVDPGEAQPVQQWLEQNSKSIETILVTHHHYDHTGGIAELI----- 67 Query: 102 QKRPIDVYAAPD 113 ++ P V + Sbjct: 68 EQSPCPVIGPEN 79 >gi|313622817|gb|EFR93145.1| metallo-beta-lactamase family protein [Listeria innocua FSL J1-023] Length = 215 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 11/109 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R + I VY +P ++ + S + I Sbjct: 60 AVLLTHCHYDHIGALEEIRSTY-----QIPVYVSP--LEQQWLSNPDLNLSAHIAGKAII 112 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P E ++ + P H I S+ F F + A D Sbjct: 113 AQPAEYEFTLGDYNIEGFRFKVVPTP---GHS-IGSVSFIFDDFAVVGD 157 >gi|307595167|ref|YP_003901484.1| beta-lactamase domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307550368|gb|ADN50433.1| beta-lactamase domain-containing protein [Vulcanisaeta distributa DSM 14429] Length = 300 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 42/205 (20%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQVL---SIDAVLYTHPHADHIHG 91 RT + + + +N VI+DTG D ++L + A++ TH HADHI G Sbjct: 19 RTNAGVLV-----IDNNECVIIDTGIDEDSGRRILNAIKPLNLRVRAIINTHHHADHIGG 73 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFE---SFRYCFKALDDRTYPPIVNPIVIENNDV 148 +K+ VYA P+ + Y F + P ++ ++E V Sbjct: 74 ----NALIVKRSGAT-VYATPEDKPFIERPVLEPLYLFGSFP----PKLLRTKLLEAEGV 124 Query: 149 PICMKSAGG---VIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLI 205 + +E +P+ + +G +GN + D FP Sbjct: 125 MVKELDDLYREVSLEVMPLPGH--TMGMVGIAYGNTLFTADA-FFP-------------- 167 Query: 206 IDALKNGLHSSHFSLSESLKKIELI 230 +D ++ H + +L+ + + Sbjct: 168 VDVIRKYGAPYHLNAGLALESLRKL 192 >gi|156936804|ref|YP_001434600.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156565788|gb|ABU81193.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I] Length = 652 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 17/86 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYM--------QVLREQVLSIDAVLYTHPHADHIH 90 RS++ + + V++D G + +V + +DAV+ TH H DH Sbjct: 195 RSAILLET-----KESKVLLDFGANVGSYDPQKHFPKVEEVPIDELDAVIVTHAHLDHCG 249 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMK 116 L + K VY Sbjct: 250 ----LVPWLYKYGYRGPVYVTQPTRD 271 >gi|163846619|ref|YP_001634663.1| cyclic nucleotide-binding [Chloroflexus aurantiacus J-10-fl] gi|222524416|ref|YP_002568887.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] gi|163667908|gb|ABY34274.1| cyclic nucleotide-binding [Chloroflexus aurantiacus J-10-fl] gi|222448295|gb|ACM52561.1| cyclic nucleotide-binding protein [Chloroflexus sp. Y-400-fl] Length = 707 Score = 46.3 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 13/155 (8%) Query: 52 SNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +N ++ D + + L ID V+ +H H DHI G+ L L + + + Sbjct: 236 NNQPLLFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELI---LTGGKRVQLV 292 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 A + L + D + G A + Sbjct: 293 TAQPIYRSLLRVLGVMLDLPP----ATVAELFDFYPLDPGQPLDLHGYHFTATYAVH--- 345 Query: 170 RISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 + ++ R V Y D+ + LE L L Sbjct: 346 SVPTIAVRVNGVGYSGDM-RYDEAWLEHLHQTGHL 379 >gi|313619699|gb|EFR91321.1| putative secreted lipoprotein [Listeria innocua FSL S4-378] Length = 112 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLR----EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S + + TT+++DTG ++L + +D +L THPHADHI D + Sbjct: 51 STLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKLDLLLLTHPHADHIGNADKVIA 107 >gi|116334016|ref|YP_795543.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus brevis ATCC 367] gi|116099363|gb|ABJ64512.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus brevis ATCC 367] Length = 559 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 30/133 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F Q L E I A++ TH H DHI GI Y LK Sbjct: 36 ILIDAGIKFPEDELLGIDYVIPDYQYLVENQAKIKALVITHGHEDHIGGI----PYLLKA 91 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + VYA P + + L++ I+++ V + Sbjct: 92 LN-VPVYAGPLALALIKNK-------LEEHGLLKSTELHAIDDDTV-----LKFRKMSVS 138 Query: 163 PILQQHGRISSLG 175 H +LG Sbjct: 139 FFRTTHSIPDTLG 151 >gi|90961623|ref|YP_535539.1| metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227890710|ref|ZP_04008515.1| metallo-beta-lactamase [Lactobacillus salivarius ATCC 11741] gi|90820817|gb|ABD99456.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius UCC118] gi|227867648|gb|EEJ75069.1| metallo-beta-lactamase [Lactobacillus salivarius ATCC 11741] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F L I A++ TH H DHI GI +L Q Sbjct: 36 IVVDAGIKFPEDDLLGIDYVIPDYSYLIANQQKIKALVITHGHEDHIGGIP-----YLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVI 159 K + VYA P + + L++ I+ + S Sbjct: 91 KINVPVYAGPLALALIK-------SKLEEHGLLRTTELHEIDEDSILKFRKTTVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP + G I G ++F Sbjct: 144 HSIPDTLGVAVKTPSGTIVCTGDYKFD 170 >gi|187934382|ref|YP_001887638.1| putative metal-dependent hydrolase [Clostridium botulinum B str. Eklund 17B] gi|187722535|gb|ACD23756.1| putative metal-dependent hydrolase [Clostridium botulinum B str. Eklund 17B] Length = 242 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV----LREQVLSIDAVLYTHPHADHIHG 91 R +S I++ +N +++D G + ++ L + I +L TH H DH+ Sbjct: 17 REGNTSAYINK-----NNILILIDCGEGVFKRIIESNLTNNIKEIH-ILITHMHGDHVGS 70 Query: 92 IDGLRGYFLKQ-KRPIDVYAAPD 113 + G+ + +VY Sbjct: 71 LSSFVGFCFWKYHICCNVYYPEK 93 >gi|58616880|ref|YP_196079.1| hypothetical protein ERGA_CDS_01530 [Ehrlichia ruminantium str. Gardel] gi|58416492|emb|CAI27605.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 542 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 18/136 (13%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 VI+D G F +++ + ++ TH H DHI GI + Sbjct: 28 GKWVIIDFGAGFADDNMPGIDMIVADISFIKQNKKDLLGIVLTHAHEDHIGGIQ-----Y 82 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L +YA L + C + P I+ I M + + Sbjct: 83 LWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPSQKLILGPFTLEFINMTHSIPEM 142 Query: 160 EAIPILQQHGRISSLG 175 AI + + G + G Sbjct: 143 NAIALHTEKGTVIHTG 158 >gi|170087480|ref|XP_001874963.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650163|gb|EDR14404.1| predicted protein [Laccaria bicolor S238N-H82] Length = 476 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 22/99 (22%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M + LG + G P+ +N SSL + + ++ +VD Sbjct: 36 MPQHMSVLFLGTSSGGG------------PSESRNC---SSLVCEFLKDSSLWSSAVVDC 80 Query: 61 GPDFYMQVL-------REQVLSIDAVLYTHPHADHIHGI 92 Q + + I + TH HADHI GI Sbjct: 81 AEGTIRQFQFQPSNTYQVRPNKITKIFITHMHADHIMGI 119 >gi|300214434|gb|ADJ78850.1| Metallo-beta-lactamase superfamily protein [Lactobacillus salivarius CECT 5713] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 ++VD G F L I A++ TH H DHI GI +L Q Sbjct: 36 IVVDAGIKFPEDDLLGIDYVIPDYSYLIANQQKIKALVITHGHEDHIGGIP-----YLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVI 159 K + VYA P + + L++ I+ + S Sbjct: 91 KINVPVYAGPLALALIK-------SKLEEHGLLRTTELHEIDEDSILKFRKTTVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP + G I G ++F Sbjct: 144 HSIPDTLGVAVKTPSGTIVCTGDYKFD 170 >gi|327197621|ref|YP_004301312.1| gp36 [Brochothrix phage NF5] gi|296245444|gb|ADH03058.1| gp36 [Brochothrix phage NF5] Length = 236 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 58/221 (26%) Query: 50 RGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + + ++++ G F + L+ I+ L +H H DH G+ + I Sbjct: 18 QDGPSRLLIECGIAFTQIRKALKYDFKGIEGCLISHEHGDHTKGLKKMAAET-----NIK 72 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +YA+ ++ F+ D + +V +P Q Sbjct: 73 IYASKGTLER--------FEFSDSQIVVIKSKTLV------------KINKWRILPFETQ 112 Query: 168 HGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA-------------- 208 H LGF + + TD KL +D+++++ Sbjct: 113 HDAKEPLGFVIQAPNGERLLFITDSYYI----KFKLPAVDYMLLECNYDDETLKESIEIG 168 Query: 209 -----LKNGLHSSHFSLSES---LKKIELINPKNAILTHMH 241 L N + SHFSL+ LK +L K L H+ Sbjct: 169 ATAPFLANRVRKSHFSLNNVKMFLKANDLTRLKGITLIHIS 209 >gi|270293184|ref|ZP_06199395.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] gi|270279163|gb|EFA25009.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M143] Length = 553 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D + D + G V+ H SLG G++ Y Sbjct: 105 GND----AVKKFNDFHVIDEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTPKGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|260438115|ref|ZP_05791931.1| ribonuclease Z [Butyrivibrio crossotus DSM 2876] gi|292809439|gb|EFF68644.1| ribonuclease Z [Butyrivibrio crossotus DSM 2876] Length = 302 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 +LG G + +P NR I+ + + + +++++D G Sbjct: 2 LDLCLLGTGGMMPLP---------------NR------FITSLITKYNGSSLLIDCGEGT 40 Query: 65 YMQVLREQVLS--IDAVLYTHPHADHIHGI 92 + + + S +D +L TH HADH+ G+ Sbjct: 41 QVAMKKFGHSSKPVDIILLTHFHADHVSGL 70 >gi|226226588|ref|YP_002760694.1| hypothetical protein GAU_1182 [Gemmatimonas aurantiaca T-27] gi|226089779|dbj|BAH38224.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 296 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 80/259 (30%), Gaps = 33/259 (12%) Query: 20 RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSID 77 R G G C P+ R + V G V+ D G Q L+ + Sbjct: 15 RFWGTRGTCASPGPRTVRYGGNTPCVEVRGSGGPALVL-DAGTGIRCLGQHLQRSPETDA 73 Query: 78 AV--LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 A+ TH HADH+ G+ + R + V+ L Sbjct: 74 AIHLFLTHRHADHVIGLPHFAPL-HARTRTMHVWCGDGGEDSLPAFLNTLVSPPLFPQVD 132 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAF 190 +V ++ + A G H +++ R + +AY D N Sbjct: 133 GLVGQLLAHEWAPGKSV--AVGEYTVHRFGANHPGEAAI-IRIDDANGPVMAYAPD-NEL 188 Query: 191 P------------AESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINP 232 A + L+++ L+ DA L + H S SE+++ Sbjct: 189 AYANSDAAHLEWLASLYDFLRDVPLLVHDATYTDDELVTHVGWGHSSASEAVRLAIACGV 248 Query: 233 KNAILTHMHVDLDYDMVLK 251 L H H D D D V + Sbjct: 249 GTLALFHHHPDRDDDAVER 267 >gi|20807652|ref|NP_622823.1| Zn-dependent hydrolase, including glyoxylases [Thermoanaerobacter tengcongensis MB4] gi|20516197|gb|AAM24427.1| Zn-dependent hydrolases, including glyoxylases [Thermoanaerobacter tengcongensis MB4] Length = 214 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 49 ERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +R + +I+D G D ++E + + +L TH H DHI G++ +R + Sbjct: 25 DRDTREGIIIDPGEVYDEIKNYIKENGIKVKHILLTHGHFDHIGGVEEIRAFT 77 >gi|300854406|ref|YP_003779390.1| putative metal-dependent hydrolase [Clostridium ljungdahlii DSM 13528] gi|300434521|gb|ADK14288.1| predicted metal-dependent hydrolase [Clostridium ljungdahlii DSM 13528] Length = 555 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N +++D G F L++ + + + TH H DHI + Y Sbjct: 30 NDIIVIDCGMSFPDADMLGIDIVIPDITYLKKNIDRVRGIFLTHGHEDHIGAL----PYV 85 Query: 100 LKQKRPIDVYAAPDCM 115 LK+ + VY + Sbjct: 86 LKEIN-VPVYGTKLTL 100 >gi|301092872|ref|XP_002997287.1| cGMP-dependent 3',5'-cGMP phosphodiesterase, putative [Phytophthora infestans T30-4] gi|262111422|gb|EEY69474.1| cGMP-dependent 3',5'-cGMP phosphodiesterase, putative [Phytophthora infestans T30-4] Length = 792 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 28/176 (15%) Query: 17 GVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS- 75 GV + G +P + +S + ++ RG +++D P + + + Sbjct: 179 GVTVLGNSHG----FDPNGK---TSGYVLWINHRG----IMIDPPPFSSSILSANNIPAL 227 Query: 76 -IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ID V+ TH HADH G + Q+ + + ++ SF K + Sbjct: 228 MIDGVILTHCHADHDAGTFQK----ILQEGRVAL----ITTDTIYRSF--LRKYSALSGF 277 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 P V+++ V I + E H I +GF +A+ D Sbjct: 278 EPSFLERVLDHRLVRINDLTQIRGAEFRFFYSLHS-IPCVGFEVTYGDKKIAFSGD 332 >gi|150401471|ref|YP_001325237.1| beta-lactamase domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150014174|gb|ABR56625.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3] Length = 426 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 21/180 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S V + ++VD G + L + IDAV+ +H H DH + + K Sbjct: 16 SCVEIDTKKSKILVDCGMNPSDNSLPKINPNDIDAVVVSHSHLDHCGAVP---YFNFKN- 71 Query: 104 RPIDVYAAP---DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +Y+ D M L++ K + +N I N P + S I Sbjct: 72 ---PIYSTIPSVDLMYILWKDISKLSKTYPEENIQKAMNNIKAVNYREPKKITS---DIT 125 Query: 161 AIPILQQH--GRISSLGFRFG-NVAYCTDVNAFPAESLE----KLQNLDFLIIDALKNGL 213 H G S G + Y D+N +L+ + +D LII++ Sbjct: 126 MRLYDAGHILGSSSVYLDIGGKKLLYTGDINEIETRTLKSADTDIDEIDTLIIESTYGAP 185 >gi|320095954|ref|ZP_08027572.1| hypothetical protein HMPREF9005_2184 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977111|gb|EFW08836.1| hypothetical protein HMPREF9005_2184 [Actinomyces sp. oral taxon 178 str. F0338] Length = 265 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 34/220 (15%) Query: 55 TVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK-------RPI 106 +V++D GP + + R IDA+ +H HADH+ + + +K P+ Sbjct: 40 SVLLDLGPGSFGALWRHMDPCGIDALFLSHCHADHMG---DIISLQVHRKWGPARDLAPL 96 Query: 107 DVYAAPDCMKHLFE----------SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + + + + S + F +D T V P+++ ++S G Sbjct: 97 LLLGPDGTLGRVRQIEGAVGLEDYSGEFAFARVDSATVV-RVGPLLLRAFPGQHSIESYG 155 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGL 213 +E G + R ++ Y D + P ++ + +D L+ + + + Sbjct: 156 VRVE--------GPSEADPARTASLFYTGDTDECP-SIVKGARGVDLLLSEVGFTAADQV 206 Query: 214 HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 H + + + TH+ +++V Sbjct: 207 RGIHMDGLRAGRVAAEAGAGALVATHIQPWTSHELVRAEL 246 >gi|298385172|ref|ZP_06994731.1| metal-dependent hydrolase [Bacteroides sp. 1_1_14] gi|298262316|gb|EFI05181.1| metal-dependent hydrolase [Bacteroides sp. 1_1_14] Length = 255 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 28/193 (14%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL I ++ V D DF Q D +L TH H DH + Sbjct: 57 ASLLIEYAGKKFFIDPV-SDYA-DFTQQ------PKADYILITHEHHDHF----DTKAIA 104 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + A P+C K L + K D P I+ VP + G Sbjct: 105 AIETPDTKIIANPNCQKMLDK--GQAMKNGDILQITP-----EIKLEAVPAYNTTPGRD- 156 Query: 160 EAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 + P + +G I ++G + D P +++++N+D + + + Sbjct: 157 KFHPKGRDNGYILTVGDT--RIYIAGDTEDIPE--MKQIKNIDIAFLPVNQPYT----MT 208 Query: 220 LSESLKKIELINP 232 ++++ ++I P Sbjct: 209 PEQAIQSAKIIQP 221 >gi|254479347|ref|ZP_05092684.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] gi|214034713|gb|EEB75450.1| metallo-beta-lactamase domain protein, putative [Carboxydibrachium pacificum DSM 12653] Length = 209 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Query: 49 ERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +R + +I+D G D ++E + + +L TH H DHI G++ +R + Sbjct: 20 DRDTREGIIIDPGEVYDEIKNYIKENGIKVKHILLTHGHFDHIGGVEEIRAFT 72 >gi|301299261|ref|ZP_07205547.1| ribonuclease J 1 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300853105|gb|EFK80703.1| ribonuclease J 1 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 47/147 (31%), Gaps = 35/147 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L I A++ TH H DHI GI +L Q Sbjct: 36 IIVDAGIKFPEDDLLGIDYVIPDYSYLIANQQKIKALVITHGHEDHIGGIP-----YLLQ 90 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND---VPICMKSAGGVI 159 K + VYA P + + L++ I+ + S Sbjct: 91 KINVPVYAGPLALALIK-------SKLEEHGLLRTTELHEIDEDSILKFRKTTVSFFRTT 143 Query: 160 EAIP------ILQQHGRISSLG-FRFG 179 +IP + G I G ++F Sbjct: 144 HSIPDTLGVAVKTPSGTIVCTGDYKFD 170 >gi|255577704|ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 543 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 47/180 (26%), Gaps = 41/180 (22%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH GI Y +YA L F L+D + I Sbjct: 27 FLTHAHKDHCSGILAHSSY--------PIYATHLTKSLLLLYFP----QLEDSLFVGI-- 72 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGNVAYCTDV-------- 187 + + G H + + F FGN+ + D Sbjct: 73 -----EVGQSLVIDDPYGNFSVTAFDANHCPGAVM-FLFEGSFGNILHTGDCRLSPECIQ 126 Query: 188 ----NAFPAESLEKLQNLDFLIIDALKNGLH----SSHFSLSESLKKIEL-INPKNAILT 238 E LD++ +D H S H + + + I LT Sbjct: 127 CLPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVINCIWKHPAAAIVYLT 186 >gi|46581208|ref|YP_012016.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601559|ref|YP_965959.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris DP4] gi|46450629|gb|AAS97276.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561788|gb|ABM27532.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris DP4] gi|311234878|gb|ADP87732.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris RCH1] Length = 385 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%) Query: 41 SLKISRVSERGSNTTVIVDTG--PDFYM-QVLREQV------LSIDAVLYTHPHADHIHG 91 S I G+ ++DTG D+ RE + I+A+ +H H DH G Sbjct: 141 SCLIEVEELDGTKHKYLLDTGWSYDWMEKSFKREGIDKMLQAREIEALFISHEHWDHFWG 200 Query: 92 IDGLRGYFLKQKRPIDVYAAP----DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 + +K I +Y + ++++ +S + I+ + + D Sbjct: 201 L----PVTMKYDNRIPLYVHDGFYKEGLQYIKDSGYKGTPVIQKEPMRQIIPGMAVLKFD 256 Query: 148 VPICMKSAG 156 VPI + G Sbjct: 257 VPIINRVFG 265 >gi|108799084|ref|YP_639281.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119868199|ref|YP_938151.1| beta-lactamase domain-containing protein [Mycobacterium sp. KMS] gi|126434690|ref|YP_001070381.1| beta-lactamase domain-containing protein [Mycobacterium sp. JLS] gi|108769503|gb|ABG08225.1| beta-lactamase-like protein [Mycobacterium sp. MCS] gi|119694288|gb|ABL91361.1| beta-lactamase domain protein [Mycobacterium sp. KMS] gi|126234490|gb|ABN97890.1| beta-lactamase domain protein [Mycobacterium sp. JLS] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + E++ ++A++ TH H DHI + Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDLRH--VEERLDDVEALVLTHAHEDHIGAV-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + LK + I V + + + E K + R P V +V +S Sbjct: 91 --PFLLKLRPDIPVVGSRFTLALVRE------KCREHRIKPKFV--------EVAEGQRS 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H L Sbjct: 135 THGVFECQYFAVNHSVPGCLA 155 >gi|323454061|gb|EGB09932.1| hypothetical protein AURANDRAFT_62909 [Aureococcus anophagefferens] Length = 770 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 98/301 (32%), Gaps = 54/301 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKN-----RRTR----SSLKISRVSERGSNTTV 56 LG G+++ P+ +N R R ++ + R + Sbjct: 461 ELVFLGTGSAI-------------PSKHRNVSGIYLRCRNAPGTATPAPLPAPREPGAGL 507 Query: 57 IVDTGPDFYMQVLREQVLSIDAVL-------YTHPHADHIHGIDGLRGYFLKQKRP-IDV 108 ++D G Q+ + + DAVL +HPHADH G+ L + P + + Sbjct: 508 LLDCGEGTLGQLHKVYGGATDAVLAGLGAIWVSHPHADHHLGLPALLAARRRLAAPPVAL 567 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPI-VIENNDVPICMKSAGGVIEAIPILQQ 167 A ++ L + + F + P + N ++ G+ + Sbjct: 568 MAPWPVLRFLAD-YGRAFADVRGTYEPVECQWMGERAPNPAAATLRETLGLEACFCVPVV 626 Query: 168 HGRISSLGFRFGN-----VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLH------S 215 H S G + +AY D P+ L + L+ +A Sbjct: 627 HCA-QSYGLVVRSADGWSLAYSGDCR--PSRELAAAARGATVLVHEATFEDEFWEDARAK 683 Query: 216 SHFSLSESLKKIELINPKNAILTHMHV---DLDY----DMVLKSTPSRVVPAFDGMQFSS 268 H ++SE++ +LTH + Y D + + VV A D M S Sbjct: 684 RHSTISEAVAVGADAGAARTVLTHFSQRYPSIPYVESGDDGDRRRLASVVLASDLMHVSF 743 Query: 269 P 269 P Sbjct: 744 P 744 >gi|322383056|ref|ZP_08056884.1| metal-binding hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152825|gb|EFX45450.1| metal-binding hydrolase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 202 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 14/144 (9%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +S+R + +I+D G + + R + L I+++L TH H DHI G+D +R + Sbjct: 14 ISDRNAGKGIIIDPGMNPGPLLKRIENLDIESILLTHAHLDHIGGVDEIRKL-----KGC 68 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY L + P + +++ + + I + Sbjct: 69 PVYLHDAEADWLGN------PKKNGSARWPELGELIVTDPAEYALDEGQVLEFLGIQLKV 122 Query: 167 QHGRISSLG---FRFGNVAYCTDV 187 H S G F +G + DV Sbjct: 123 FHTPGHSPGSVSFLYGKYLFSGDV 146 >gi|57339662|gb|AAW49818.1| hypothetical protein FTT0783 [synthetic construct] Length = 355 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 87 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENLP 146 Query: 108 VYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPICM 152 +F Y L +P ++P++ I+ + Sbjct: 147 FSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTK 206 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L ++ G + + + F ++ +N D Sbjct: 207 VFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 266 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 267 LMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 307 >gi|15894609|ref|NP_347958.1| beta-lactamase superfamily sulfatase [Clostridium acetobutylicum ATCC 824] gi|15024259|gb|AAK79298.1|AE007644_8 Metal-dependent hydrolases of the beta-lactamase superfamily, possible sulfatase [Clostridium acetobutylicum ATCC 824] gi|325508745|gb|ADZ20381.1| Metal-dependent hydrolase of the beta-lactamase superfamily, possible sulfatase [Clostridium acetobutylicum EA 2018] Length = 268 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 51/254 (20%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G+++ V + + + + G T++ + Sbjct: 6 ILGTGSAM-VTKCYNTCFTLSNGDEH-----------FLVDTGGGNTILTNLEK------ 47 Query: 69 LREQVLSIDAVLYTHPHADHIHGI------DGLRGYFLKQKRPIDVYAAPDCMKH----- 117 L + I V +H H DHI GI R K + +Y + ++ Sbjct: 48 LHIGIDKIHNVFISHRHNDHITGIIWIIRAVAQRIINGKYDGDLKIYCCKENIEVINTIC 107 Query: 118 ---LFESF-RYC-----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 L + F +Y F + D +++ IE D+ + G +L+ Sbjct: 108 KLLLEKKFTKYMGNRIVFSEIYDGCRLKVLDW-DIEFFDIKSTKQLQFG---FTTVLKSG 163 Query: 169 GRISSLG---FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLK 225 +++ LG +R Y + + E+ D H H ++ ++ + Sbjct: 164 KKLTFLGDEPYRENLYEYANNSDYIFHEAFCLYSEKDIF----KPYEKH--HATVKDACE 217 Query: 226 KIELINPKNAILTH 239 + ++ KN IL H Sbjct: 218 NADKLSVKNIILYH 231 >gi|11498946|ref|NP_070179.1| hypothetical protein AF1350 [Archaeoglobus fulgidus DSM 4304] gi|2649228|gb|AAB89898.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 265 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 24/136 (17%) Query: 54 TTVIVDTGPDFYMQ--VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ D G Q + I AVL TH H DHI ++ + DVY Sbjct: 33 RNLLFDAGCPNTAQEVFEHFKGREIKAVLITHYHEDHIGAVNLFKEIT-------DVYVP 85 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI-LQQHGR 170 + ++ L D Y I P ++ E + + Sbjct: 86 EESLEILRN-------PPDIPKYRKI-------GWGQPEKIEGVKVAKEVMKFDDVEVRM 131 Query: 171 ISSLGFRFGNVAYCTD 186 I + G F +V+Y D Sbjct: 132 IKTPGHSFDHVSYLVD 147 >gi|312792992|ref|YP_004025915.1| DNA internalization-related competence protein comec/rec2 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876460|ref|ZP_07736444.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor lactoaceticus 6A] gi|311796818|gb|EFR13163.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor lactoaceticus 6A] gi|312180132|gb|ADQ40302.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 752 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 41/209 (19%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADHIH 90 S I+ ++++DTGP++ +L+ V +D ++ TH H+DHI Sbjct: 521 STLITYKG-----FSMLIDTGPEYEDFSSLKRVVLPYILKRGVAKLDILVLTHKHSDHIG 575 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 D L + + + + + L + + + V D+ Sbjct: 576 DFDYLLDEMKVDR----IVTSKEVYLENAQK-------LKGQKVVLVDSLKVYRYKDLKA 624 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQNLDFLIIDA 208 PI + + FGN + + D + + K NL +I Sbjct: 625 YF--------IPPIEEDENNSVVVKLTFGNFSMLFTGDASYESEKEYVKKYNLHAII--- 673 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S + S + +E + PK A++ Sbjct: 674 LKVGHHGS--STATSEEFLENVKPKVAVI 700 >gi|309805693|ref|ZP_07699733.1| ribonuclease Z [Lactobacillus iners LactinV 09V1-c] gi|309807086|ref|ZP_07701065.1| ribonuclease Z [Lactobacillus iners LactinV 03V1-b] gi|309807945|ref|ZP_07701873.1| ribonuclease Z [Lactobacillus iners LactinV 01V1-a] gi|309809257|ref|ZP_07703126.1| ribonuclease Z [Lactobacillus iners SPIN 2503V10-D] gi|325912017|ref|ZP_08174419.1| ribonuclease Z [Lactobacillus iners UPII 143-D] gi|325912839|ref|ZP_08175217.1| ribonuclease Z [Lactobacillus iners UPII 60-B] gi|308164946|gb|EFO67189.1| ribonuclease Z [Lactobacillus iners LactinV 09V1-c] gi|308166516|gb|EFO68716.1| ribonuclease Z [Lactobacillus iners LactinV 03V1-b] gi|308168796|gb|EFO70886.1| ribonuclease Z [Lactobacillus iners LactinV 01V1-a] gi|308170370|gb|EFO72394.1| ribonuclease Z [Lactobacillus iners SPIN 2503V10-D] gi|325476202|gb|EGC79366.1| ribonuclease Z [Lactobacillus iners UPII 143-D] gi|325477832|gb|EGC80966.1| ribonuclease Z [Lactobacillus iners UPII 60-B] Length = 308 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SS + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKGRNVSSTALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + I + +H H DHI G+ GL R + + +Y + + Sbjct: 43 QHQILETNIKPRKITKIFISHNHGDHIFGLPGLLSSRSFQGDSGG-LTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + TYP + ++++++ + K H RI S GFR Sbjct: 102 ISLK---VSKTKITYP--IKYVILKDDGIIFEDK----QFAVFTAKLDH-RIESYGFRV 150 >gi|299822176|ref|ZP_07054062.1| metallo-beta-lactamase [Listeria grayi DSM 20601] gi|299815705|gb|EFI82943.1| metallo-beta-lactamase [Listeria grayi DSM 20601] Length = 211 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 16/140 (11%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +IVD G + +++ ++ + A+L TH H DHI ++ +R I Sbjct: 21 DKKALIVDPGAE--AELIIAKIKELAVEPVAILLTHCHFDHIGALEEVR-----NTYEIP 73 Query: 108 VYAAPDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY +P + L F +P I P E ++ + P Sbjct: 74 VYVSPLEQEWLSNPEFNGSAAFSAYANHPVICEPAEYELEMKEYDIEGFRFRVVPTP--- 130 Query: 167 QHGRISSLGFRFGNVAYCTD 186 H I S+ + F + D Sbjct: 131 GHS-IGSVSYIFADFVISGD 149 >gi|262276306|ref|ZP_06054115.1| metallo-beta-lactamase family protein RNA-specific [Grimontia hollisae CIP 101886] gi|262220114|gb|EEY71430.1| metallo-beta-lactamase family protein RNA-specific [Grimontia hollisae CIP 101886] Length = 451 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 8/68 (11%) Query: 52 SNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N +++D G + + V IDA++ TH H DHI + L Sbjct: 22 ENGKLLIDCGLFQGDEVRALEIDFDVQDIDALILTHAHIDHIGRLPWLLAAGFTS----P 77 Query: 108 VYAAPDCM 115 +Y Sbjct: 78 IYCTSATA 85 >gi|193676458|ref|XP_001951701.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2-like [Acyrthosiphon pisum] Length = 729 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 36/185 (19%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++D G D + L+ + IDAVL +HP H+ + L G Sbjct: 26 DEFKFLLDCGWDERFSMGVVNKLKRYIHQIDAVLLSHPDRFHLGILPYLVGKC---GLNC 82 Query: 107 DVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 VYA + + F Y F + + ++ + + +K G Sbjct: 83 PVYATIPVY-QMGQMFMYDLHQSLCNAEDFDLFNLDDVDAAFDKVIQVKYNQIVSLKGKG 141 Query: 157 GVIEAIPILQQH---GRISSLGFRF-----GNVAYCTDVN-----AFPAESLEKLQNLDF 203 + + + H G I +R ++ Y D N LE+L Sbjct: 142 IGLRIVALPAGHMVGGTI----WRISKVGEEDIVYAVDFNHKKERHLNGSDLERLGRPSL 197 Query: 204 LIIDA 208 LI+D Sbjct: 198 LILDC 202 >gi|154272101|ref|XP_001536903.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408890|gb|EDN04346.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 334 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIH 90 RT + I + ER +++DTG + L+ + +I VL TH H DH+ Sbjct: 73 RTNTY-LIGQCHER-----ILIDTGEGRPSWTENLKAALKNENATIRTVLLTHWHHDHVG 126 Query: 91 GIDGLRGYF 99 G+ L Sbjct: 127 GVPDLLKIC 135 >gi|148262428|ref|YP_001229134.1| ribonuclease Z [Geobacter uraniireducens Rf4] gi|146395928|gb|ABQ24561.1| Metal-dependent hydrolase of the beta-lactamase superfamily III-like protein [Geobacter uraniireducens Rf4] Length = 361 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 48 SERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R +++ D G + + + SI+A+ +H H DH G+D + + +D Sbjct: 27 HARPLGKSLLFDCGQ--LHHLAKRVLKSINALFISHAHMDHFMGVDTFIRHNHVSPKTVD 84 Query: 108 VYAAP 112 ++ P Sbjct: 85 IFGPP 89 >gi|167465580|ref|ZP_02330669.1| hypothetical protein Plarl_23976 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 207 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 14/144 (9%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +S+R + +I+D G + + R + L I+++L TH H DHI G+D +R + Sbjct: 19 ISDRNAGKGIIIDPGMNPGPLLKRIENLDIESILLTHAHLDHIGGVDEIRKL-----KGC 73 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY L + P + +++ + + I + Sbjct: 74 PVYLHDAEADWLGN------PKKNGSARWPELGELIVTDPAEYALDEGQVLEFLGIQLKV 127 Query: 167 QHGRISSLG---FRFGNVAYCTDV 187 H S G F +G + DV Sbjct: 128 FHTPGHSPGSVSFLYGKYLFSGDV 151 >gi|327308802|ref|XP_003239092.1| metallo-beta-lactamase [Trichophyton rubrum CBS 118892] gi|326459348|gb|EGD84801.1| metallo-beta-lactamase [Trichophyton rubrum CBS 118892] Length = 294 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 54 TTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++DTG Q L + ++ L TH H DH+ G+ LR + Sbjct: 44 KRLLIDTGEGKPSWSVALQQTLTSERATVSHALLTHWHHDHVGGVRDLRRICPDVQ 99 >gi|319745751|gb|EFV98048.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 559 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 Y N + + + G++ P G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLNVTFFRTTHSIPEPLGIVIHTP----QGKVICTGDFKFD 170 >gi|295111991|emb|CBL28741.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Synergistetes bacterium SGP1] Length = 386 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 30/181 (16%) Query: 52 SNTTVIVDTGPDFYM------QVLRE-------QVLSIDAVLYTHPHADHIHGIDGLRGY 98 V++D G F +L + + AV+ +H H DH+ + L Sbjct: 29 GGERVLLDAGIRFGAPFGSFPSLLAFLKKWDMDGLWELSAVIISHAHLDHMGALPTLLDE 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI----CMKS 154 + VY++P + + + + + I + + +P +++ Sbjct: 89 L----GTVPVYSSPATLDLMRTYYENFEQRSPASSGRNIAVRLAATDRLIPKPYGTTIQT 144 Query: 155 AGGVIEAIPILQQHG---RISSLGFRFGNVAYCTDVNAFPAESLEKLQ----NLDFLIID 207 I P G + G R V Y D F ++ + +D LI + Sbjct: 145 KELNITLFPAGHIPGAAMTLLEDGER--RVLYTGDFCDFAQHTVGAAEFPQTKVDTLICE 202 Query: 208 A 208 Sbjct: 203 C 203 >gi|284048674|ref|YP_003399013.1| hypothetical protein Acfer_1338 [Acidaminococcus fermentans DSM 20731] gi|283952895|gb|ADB47698.1| conserved hypothetical protein [Acidaminococcus fermentans DSM 20731] Length = 266 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 46/255 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 LG G ++ TR + R + ++VD G Sbjct: 1 MEILFLGTGHAIS--------------------TRC--YNTCYVLRQNERYLLVDGGGGN 38 Query: 64 -FYMQVLREQVL--SIDAVLYTHPHADHIHGID-GLRGYFLKQKRPI-----DVYAAPDC 114 Q+ R ++ I + TH H DH+ GI +R KR +Y + Sbjct: 39 GILRQLKRARLPWQKIKDIFVTHRHMDHVLGIFWVIRMIVKAMKRGTYVGEARIYGHDEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM--KSAGGVIEAIPILQQHGRIS 172 + L + R D + ++ I +E+ + I + Q + Sbjct: 99 ITLLRSTARLLLDPGDLKFLDTRLHFITVEDGETRKIRGWDVTFFDIHSTKAKQYGYILE 158 Query: 173 SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL-------KNGLHSSHFS-LSESL 224 S G + G C D + +L +L+ +A + + H S + E+ Sbjct: 159 SNGHKLGC---CGD-EPMNDHNFTRLSGSQWLLHEAFCLYRERDRFRPYEKHHSTVREAC 214 Query: 225 KKIELINPKNAILTH 239 + + + N IL H Sbjct: 215 ENGDRLQVPNLILYH 229 >gi|254515712|ref|ZP_05127772.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] gi|219675434|gb|EED31800.1| metallo-beta-lactamase family protein [gamma proteobacterium NOR5-3] Length = 456 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDF---------YMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 ++VD G F +Q + E+ ++ ++ TH H DHI + Sbjct: 29 DGAWLMVDCGITFERDSTRIRPRVQTPDPRFIVERKDALAGIVLTHAHEDHIGALP---- 84 Query: 98 YFLKQKRPIDVYAAPDCMKHLFES 121 L ++ P+ VY P + L Sbjct: 85 -LLWERFPVPVYTTPFTAEVLRRK 107 >gi|206895786|ref|YP_002246519.1| RNA-metabolising metallo-beta-lactamase [Coprothermobacter proteolyticus DSM 5265] gi|206738403|gb|ACI17481.1| RNA-metabolising metallo-beta-lactamase [Coprothermobacter proteolyticus DSM 5265] Length = 504 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 50 RGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 N +++D G D+ Q L + ++A+L TH H DH I +K Sbjct: 20 ESDNAKLLIDFGMFQGKEEDWNYQPLDIKAKEVNALLLTHAHLDHSGRI----PVLVKNG 75 Query: 104 RPIDVYAAPDCMK 116 ++A P ++ Sbjct: 76 FRGPIFATPPTIE 88 >gi|22537900|ref|NP_688751.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76798238|ref|ZP_00780487.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77409378|ref|ZP_00786078.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|22534797|gb|AAN00624.1|AE014271_19 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|76586391|gb|EAO62900.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|77172019|gb|EAO75188.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] Length = 559 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 Y N + + + G++ P G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTP----QGKVICTGDFKFD 170 >gi|312071505|ref|XP_003138639.1| hypothetical protein LOAG_03054 [Loa loa] gi|307766196|gb|EFO25430.1| hypothetical protein LOAG_03054 [Loa loa] Length = 336 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 11/99 (11%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G Q + +I ++ TH H DHI GI + + P+ Sbjct: 83 TEGKILIDCGNSGVKQYIDYLKEALGNNTIRLIICTHWHDDHIGGIPDI--FKHVTNGPV 140 Query: 107 DVYAAPDC--MKHLFESFRYCFKALDDRTYPPIVNPIVI 143 V+ ++ F Y + + P V I Sbjct: 141 PVHKLRKTDSLEVGNIKFDYI--SPESVITAPGVTLRCI 177 >gi|226313003|ref|YP_002772897.1| hypothetical protein BBR47_34160 [Brevibacillus brevis NBRC 100599] gi|226095951|dbj|BAH44393.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 21/146 (14%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + V++D G F + L E + ++ TH H DHI G+ Sbjct: 27 QSGDDIVVIDAGLKFPEEEMLGIDMVIPDITYLEEHRDKVRGIIITHGHEDHIGGL---- 82 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI--ENNDVPICMKS 154 Y LK + + VYA + + + + + + VI + + Sbjct: 83 SYVLKHLK-VPVYATKLTLGLIDAKLKEAGILNETKRVLINSDSEVILGKMKATFFRVNH 141 Query: 155 AGGVIEAIPILQQHGRISSLG-FRFG 179 + + + G I G F+F Sbjct: 142 SIPDCVGVCLDTPEGYIVHTGDFKFD 167 >gi|118619119|ref|YP_907451.1| metal-dependent hydrolase [Mycobacterium ulcerans Agy99] gi|118571229|gb|ABL05980.1| conserved hypothetical metal-dependent hydrolase [Mycobacterium ulcerans Agy99] Length = 257 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 48/251 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LGC S + D S + +++D G Sbjct: 4 RITVLGCSGS----VVGPD----------------SAASGYLLRAPDTPPIVIDFGGGVV 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------VYAAPDCMKHL 118 + R + VL +H HADH + G F+ ++ +Y D L Sbjct: 44 GALQRHLDPASVHVLLSHLHADHCL---DMPGLFVWRRYHPSRPKGKALLYGPSDTWSRL 100 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F D ++ V + + + A P S G RF Sbjct: 101 GAA-SSPFGGEIDDCSDIFDVRHWVDGEPVTLGGVTVVPTVVAHP-------TESYGMRF 152 Query: 179 GN-----VAYCTDVNAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIEL 229 + +AY D + +E + +D + +A + H S +E+ + Sbjct: 153 TDSTGASLAYSGDT-GMCDQLIELARGVDVFLCEASWTHSPDRPPDLHLSGTEAGRAAAR 211 Query: 230 INPKNAILTHM 240 + +LTH+ Sbjct: 212 AGVRELLLTHI 222 >gi|24214629|ref|NP_712110.1| CAP family transcription factor [Leptospira interrogans serovar Lai str. 56601] gi|45657830|ref|YP_001916.1| cyclic nucleotide binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195606|gb|AAN49128.1| CAP family transcription factor [Leptospira interrogans serovar Lai str. 56601] gi|45601070|gb|AAS70553.1| cyclic nucleotide binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 719 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 21/160 (13%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLR 96 +S I ++ +G ++VD + + + V I+ V+ TH HADH G Sbjct: 221 NTSGFIIWLNHQG----IMVDPPVNSTEWLRQSNVNPKLINHVILTHCHADHDAGTFQK- 275 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + ++ I ++A M + K + + + G Sbjct: 276 ---ILEENKITIHATETVMDSFLRKYSALTKIPKKE----LQELFHFQPIIIGKATMING 328 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA 192 G L I S+GF F + Y +D P Sbjct: 329 GEFNFHYALH---SIPSVGFEFFFQDQSFIYTSDHLNEPE 365 >gi|83953632|ref|ZP_00962353.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] gi|83841577|gb|EAP80746.1| metallo-beta-lactamase family protein [Sulfitobacter sp. NAS-14.1] Length = 338 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 N ++D G P+ + + DAV TH H DHI G + + +Y Sbjct: 6 GNRRWLLDCGFGPEAHAHFDPRWLKGADAVFITHDHIDHIGG------AIYAVEAGLPIY 59 Query: 110 AAPDCMKHL 118 A K L Sbjct: 60 ATAQTAKAL 68 >gi|229189886|ref|ZP_04316896.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 10876] gi|228593560|gb|EEK51369.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus ATCC 10876] Length = 417 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G + Y ++ E V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKILFDCGINRSYENSYPKIEGEVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|219117453|ref|XP_002179521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409412|gb|EEC49344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 285 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 10/133 (7%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--- 104 R ++T + D G Q++R ++ + + TH H DHI G+ GL + R Sbjct: 25 RMGSSTFLFDAGEGVQTQMMRSKLKFRDVRKIFITHLHGDHIFGLLGLLLSMQESGRKKY 84 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + +Y + + + V I+ + + S I Sbjct: 85 ALQIYGPVGLYNFIAMGLSLSMTEIKRIS----VEAEEIKTPEDALRFSSRPKGIRIKAA 140 Query: 165 LQQH-GRISSLGF 176 H ++ G+ Sbjct: 141 ELHHIPKLQCFGY 153 >gi|148266403|ref|YP_001233109.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146399903|gb|ABQ28536.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 558 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 30/140 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F L ++ + + TH H DHI + + Sbjct: 32 GDDIIIIDCGLMFPEPYMLGIDIVIPDISYLLDRADKVRGICLTHGHEDHIGAL----PF 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 L++ P +Y + + E L + V+ V++ D+ + GV Sbjct: 88 VLREINP-PIYGTALTLGFVKEK-------LKEYDLDSKVDLRVVKPRDI-----VSLGV 134 Query: 159 IEAIPILQQHGRISSLGFRF 178 I H + G Sbjct: 135 FSVEFIRVAHSIVDGCGLAI 154 >gi|70982776|ref|XP_746916.1| metallo-beta-lactamase domain protein [Aspergillus fumigatus Af293] gi|66844540|gb|EAL84878.1| metallo-beta-lactamase domain protein [Aspergillus fumigatus Af293] gi|159122841|gb|EDP47961.1| metallo-beta-lactamase domain protein [Aspergillus fumigatus A1163] Length = 330 Score = 46.3 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++DTG + VL+ +SI +L TH H DH G+ L Y Sbjct: 60 GPSRILIDTGQGLPIWLSRIVGVLQSNNISISHILLTHWHGDHTGGVPDLISYN 113 >gi|209517709|ref|ZP_03266546.1| beta-lactamase domain protein [Burkholderia sp. H160] gi|209501884|gb|EEA01903.1| beta-lactamase domain protein [Burkholderia sp. H160] Length = 454 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 28/145 (19%) Query: 52 SNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++VD G + ++ L SIDAVL TH H DH + Sbjct: 22 PGLRILVDCGLFQGLKNLRLRNWASLPVPADSIDAVLLTHAHLDHSG----YLPLLARNG 77 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDD----------RTYPPIVNPIVIENNDVPICMK 153 VY P K ++ + P + ++ + + Sbjct: 78 FRGPVYCTPGTAALCEIMLPDSAKLQEEEADFANRHGFSKHRPALPLYTQDDAQRALHLL 137 Query: 154 SAGGVIEAIPILQQHGRISSLGFRF 178 + P+ HG L FRF Sbjct: 138 APRRF--DTPVELPHG----LCFRF 156 >gi|307704352|ref|ZP_07641269.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] gi|307622112|gb|EFO01132.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK597] Length = 553 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|307710652|ref|ZP_07647085.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] gi|307618595|gb|EFN97738.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK564] Length = 553 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|307706139|ref|ZP_07642958.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] gi|307618539|gb|EFN97687.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis SK321] Length = 553 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|307708315|ref|ZP_07644782.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] gi|307615761|gb|EFN94967.1| metallo-beta-lactamase superfamily protein [Streptococcus mitis NCTC 12261] Length = 553 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|293364955|ref|ZP_06611672.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307703206|ref|ZP_07640152.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|291316405|gb|EFE56841.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] gi|307623281|gb|EFO02272.1| metallo-beta-lactamase superfamily protein [Streptococcus oralis ATCC 35037] Length = 553 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI D + G V+ H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVI---DEDTEIDFGGTVVSF--FRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|256822533|ref|YP_003146496.1| beta-lactamase domain-containing protein [Kangiella koreensis DSM 16069] gi|256796072|gb|ACV26728.1| beta-lactamase domain protein [Kangiella koreensis DSM 16069] Length = 451 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + + V+VD G + LRE+ + S+DAV+ TH H DH I KQ Sbjct: 22 TTSRVLVDCGLFQGYKWLRERNWQEPLFDIKSLDAVILTHAHLDHSGYI----PALYKQG 77 Query: 104 RPIDVYAAPDCMK 116 VY Sbjct: 78 YRGPVYTHHATKD 90 >gi|226366143|ref|YP_002783926.1| hypothetical protein ROP_67340 [Rhodococcus opacus B4] gi|226244633|dbj|BAH54981.1| hypothetical protein [Rhodococcus opacus B4] Length = 600 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ ++AV+ TH H DHI I + L+ + + V + + + Sbjct: 97 PDFRH--IEDRMDDVEAVVLTHGHEDHIGAI----PFLLRLRPDLPVVGSRFTLALVAA- 149 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 K + R P +V + ++ G E H Sbjct: 150 -----KCREHRQRPNLVEVVE--------GQRTEHGPFECEYFAVNHS 184 >gi|110759553|ref|XP_001122361.1| PREDICTED: protein artemis-like isoform 1 [Apis mellifera] gi|328781177|ref|XP_003249933.1| PREDICTED: protein artemis-like isoform 2 [Apis mellifera] Length = 392 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 30/134 (22%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPID-----VYAAPDCMKHLFESFRY---CFKALDD 131 +H H+DH+HG+ + +F ID +Y +P L F++ C K +D Sbjct: 30 FLSHCHSDHMHGLSDM--FF----EHIDEYNKYLYCSPITKALLENRFKFKTSCVKEIDI 83 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDV 187 + P V I+N D +I I H S + F F + Y D Sbjct: 84 NS--PTVIEYSIKNEDK--------ILICVTCIPAGHCPGSVM-FLFEKNNISILYTGDF 132 Query: 188 NAFPAESLEKLQNL 201 + KL++L Sbjct: 133 -RINPKDFPKLKSL 145 >gi|89895893|ref|YP_519380.1| hypothetical protein DSY3147 [Desulfitobacterium hafniense Y51] gi|89335341|dbj|BAE84936.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 836 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 14/61 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQ-----VLREQVLSIDAVLYTHPHADHIH 90 + I E ++VDTGP D + +L+ + +DA++ THPH DH+ Sbjct: 566 CILIETPEE----IRIMVDTGPKTSTFDAGERVIVPYLLQRGIKRLDALILTHPHGDHVG 621 Query: 91 G 91 G Sbjct: 622 G 622 >gi|83942412|ref|ZP_00954873.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] gi|83846505|gb|EAP84381.1| metallo-beta-lactamase family protein [Sulfitobacter sp. EE-36] Length = 338 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 N ++D G P+ + + DAV TH H DHI G + + +Y Sbjct: 6 GNRRWLLDCGFGPEAHAHFDPRWLKGADAVFITHDHIDHIGG------AIYAVEAGLPIY 59 Query: 110 AAPDCMKHL 118 A K L Sbjct: 60 ATAQTAKAL 68 >gi|302693655|ref|XP_003036506.1| hypothetical protein SCHCODRAFT_12586 [Schizophyllum commune H4-8] gi|300110203|gb|EFJ01604.1| hypothetical protein SCHCODRAFT_12586 [Schizophyllum commune H4-8] Length = 382 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 41/137 (29%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--DFY 65 T LG ++ P + R SSL + + + D G Sbjct: 13 TFLGTASAA----------------PSSTRNHSSLALRLDGDVW-----LFDCGEATQHR 51 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGI------------------DGLRGYFLKQKRPID 107 +Q + ++ I + TH H DH+ G+ D R K PI+ Sbjct: 52 LQKSQVKMGKIQKIFITHTHGDHMFGVVPLLCSLLNGAGGTTEGADDPRTRVDKSLPPIE 111 Query: 108 VYAAPDCMKHLFESFRY 124 +Y ++ Y Sbjct: 112 LYGPQGLRAYVRGGLTY 128 >gi|240013170|ref|ZP_04720083.1| putative hydrolase [Neisseria gonorrhoeae DGI18] gi|240120241|ref|ZP_04733203.1| putative hydrolase [Neisseria gonorrhoeae PID24-1] Length = 210 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|146313153|ref|YP_001178227.1| beta-lactamase domain-containing protein [Enterobacter sp. 638] gi|145320029|gb|ABP62176.1| beta-lactamase domain protein [Enterobacter sp. 638] Length = 335 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 18/130 (13%) Query: 44 ISRVSERGSNTTVIVDTGPD---------FYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 I+ ++VDTG + SIDAVL TH HADH G+ Sbjct: 102 INAYVIDDGKKRILVDTGAGELFGNTGGHLQANLAAAGYPADSIDAVLLTHIHADHSGGV 161 Query: 93 DGL------RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 KR ++ + P + + S + F + +T P++N ++ Sbjct: 162 SRSGKPAFPNADVYVDKRDVEFWLNPSNINQVEASQAHTFAESE-KTLRPVINAGRLKTF 220 Query: 147 DVPICMKSAG 156 P + Sbjct: 221 LAPATLPEGI 230 >gi|116331190|ref|YP_800908.1| family transcription factor CAP [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124879|gb|ABJ76150.1| CAP family transcription factor [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 719 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 23/180 (12%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--I 76 P I P++ + +S I ++ +G ++VD + + + V I Sbjct: 203 PIIGITCL--GPSHGFDPEDNTSGFIIWLNHQG----IMVDPPVNSTEWLRQSNVNPKLI 256 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 + V+ TH HADH G + ++ I ++A + + K Sbjct: 257 NHVILTHCHADHDAGTFQK----ILEENKITIHATETVIDSFLRKYSALTKIPKKE---- 308 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA 192 + + GG L I S+GF F + Y +D P Sbjct: 309 LQELFHFRPIIIGKATMINGGEFNFHYALH---SIPSVGFEFFFQDQSFIYTSDHLNEPE 365 >gi|322804695|emb|CBZ02247.1| come-like protein, Metallo beta-lactamase superfamily hydrolase, secreted [Clostridium botulinum H04402 065] Length = 287 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDSLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|322783252|gb|EFZ10838.1| hypothetical protein SINV_80021 [Solenopsis invicta] Length = 737 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G DF ++ R V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDENFDQDFIKELKRH-VHQIDAVLLSYPDPLHLGALPYLVGKC---GMN 81 Query: 106 IDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F + IV + I MK Sbjct: 82 CPIYATIPVYK-MGQMFMYDIYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLI 205 G + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 141 GYGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLI 199 Query: 206 IDA 208 DA Sbjct: 200 TDA 202 >gi|313893270|ref|ZP_07826845.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442166|gb|EFR60583.1| metallo-beta-lactamase domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 314 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 36/221 (16%) Query: 57 IVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++DTG + Q+ V + ++ THPHADH+ G F + + + Sbjct: 81 MIDTGDIEHRENIVAQLKAMGVTKLKNIIITHPHADHMGG-------FYAIAKAMPI--- 130 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI-----------E 160 + FK + + + + DV A V+ + Sbjct: 131 ENVYDDGISVDNNMFKTYEKWIEKNKIKRSTLRSGDVVDFGHGAVFVVYAPWTEVLTDKK 190 Query: 161 AIPILQQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 P L + + L FG + + D + L K QN L LK G H S Sbjct: 191 GEPDLNNNSIVGKL--IFGKFSMLFTGDAELQEEKKLVKEQNSK-LFARVLKVGHHGSRT 247 Query: 219 SLSESLKKIELINPKNAILTH-MH--VDLDYDMVLKSTPSR 256 S SE ++ I P++A++++ M+ +D+ L+ Sbjct: 248 SSSE--DFLKSIRPESALISNGMYNKYGHPHDVTLRRLQEN 286 >gi|304310085|ref|YP_003809683.1| hypothetical protein HDN1F_04340 [gamma proteobacterium HdN1] gi|301795818|emb|CBL44017.1| conserved hypothetical protein [gamma proteobacterium HdN1] Length = 248 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 76/259 (29%), Gaps = 49/259 (18%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M D+ ILG G S W ++ I S +++D Sbjct: 1 MADHPFLQILGTGHSE----AMEHW-------------NTNAMIV-----SSGRRLLIDC 38 Query: 61 GPDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYF-LKQKRPIDVYAAPDCMK 116 G LR+ + IDA+ TH H DH+ G++ + + + + + + Sbjct: 39 GFTIKY-ALRDRGLGLPDIDAIFITHVHGDHVFGLERVGYESRFRYGKRVQLILHESLQE 97 Query: 117 HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM---KSAGGVIEAIPILQQH-GRIS 172 L++ + L + + + + + + +H Sbjct: 98 ELWD------QTLKGSMGRASEGENTLADFFDVVLLRDDRFDWQGVHCKLFRTRHTPNKI 151 Query: 173 SLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN 231 S G V + +D P + + D H H ++ + Sbjct: 152 SYGLHINEQVIFTSDTTPIPEQIATL--PAHTIFHDVTLRDEHPVHAAVP---ALLSAYT 206 Query: 232 P---KNAILTHMHVDLDYD 247 P K L M + DY Sbjct: 207 PEMRKKMYL--MSYE-DYW 222 >gi|261252202|ref|ZP_05944775.1| metallo-beta-lactamase family protein RNA-specific [Vibrio orientalis CIP 102891] gi|260935593|gb|EEX91582.1| metallo-beta-lactamase family protein RNA-specific [Vibrio orientalis CIP 102891] Length = 438 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 8/73 (10%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R ++VD G D + ++A++ TH H DHI + L Q Sbjct: 20 RDEQQAILVDCGLFQGADTRPLEVEFATSHLNALVITHAHIDHIGRLPWLLATGFNQ--- 76 Query: 106 IDVYAAPDCMKHL 118 +Y + + + Sbjct: 77 -PIYCSEATAELI 88 >gi|240126613|ref|ZP_04739499.1| putative hydrolase [Neisseria gonorrhoeae SK-92-679] gi|268685193|ref|ZP_06152055.1| hydrolase [Neisseria gonorrhoeae SK-92-679] gi|268625477|gb|EEZ57877.1| hydrolase [Neisseria gonorrhoeae SK-92-679] Length = 210 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|283795572|ref|ZP_06344725.1| putative metallo-beta-lactamase domain protein [Clostridium sp. M62/1] gi|291077240|gb|EFE14604.1| putative metallo-beta-lactamase domain protein [Clostridium sp. M62/1] Length = 292 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++ + G + + +++ +DAVL +H H DH+ G+ ++ Sbjct: 23 GKANILFEAGMAYAADAMIKKIREELDGQELDAVLLSHSHYDHVAGL----PAVRREWPG 78 Query: 106 IDVYAAPDCMKHL 118 + VYA+ + L Sbjct: 79 VKVYASERAKEIL 91 >gi|238495016|ref|XP_002378744.1| metallo-beta-lactamase domain protein [Aspergillus flavus NRRL3357] gi|220695394|gb|EED51737.1| metallo-beta-lactamase domain protein [Aspergillus flavus NRRL3357] Length = 351 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 10/100 (10%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++ +++DTG + L + +SI VL TH H DH GI L Sbjct: 65 GSSRILIDTGEGSPQWALSVTRYLEDHDISISQVLLTHWHKDHTGGIADLLA----HDSN 120 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 I +Y L F+ D + +++ Sbjct: 121 ITIYKHMPDHGQLDIVNGQIFQTRDATLRAVLTPGHTVDH 160 >gi|170756756|ref|YP_001780069.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|169121968|gb|ACA45804.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] Length = 287 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDSLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|168177761|ref|ZP_02612425.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|182670480|gb|EDT82454.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] Length = 287 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDSLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|153941193|ref|YP_001389786.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|152937089|gb|ABS42587.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|295317875|gb|ADF98252.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 287 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDSLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|118468499|ref|YP_888836.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155] gi|118169786|gb|ABK70682.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155] Length = 286 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 55/190 (28%), Gaps = 41/190 (21%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LG G+ + P D P S + + T +VD G Sbjct: 2 IEVTLLGTGSPIPDP---------DRAGP-------STMVRAGGQ-----TFLVDCGRGV 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-------------VY 109 ++ + A+L TH H+DHI + + Sbjct: 41 LQRLAAAGSSASQLSALLLTHLHSDHIADLGDVI-ITRWVSTFTPDAPPLPIIGPPGTAE 99 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 +K Y DD T PP P+ + + + G VI P + Sbjct: 100 VVEATLKAFGHDIGYRIAHHDDLTAPP---PVEVHEHTEGVVWDRDGVVIRVGPTDHR-P 155 Query: 170 RISSLGFRFG 179 ++ FR Sbjct: 156 VTPTIAFRVE 165 >gi|324505723|gb|ADY42454.1| Beta-lactamase-like protein 2 [Ascaris suum] Length = 308 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Query: 56 VIVDTGPDFYMQV---LREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 V++D G Q LRE + I ++ TH H DH+ G+ + + +P+ VY Sbjct: 72 VLIDAGEPSVNQYIDDLREALDENEICCIICTHWHDDHVGGVTDVINKVI--GKPVPVY 128 >gi|46199221|ref|YP_004888.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55981252|ref|YP_144549.1| metal-dependent hydrolase [Thermus thermophilus HB8] gi|60390838|sp|Q72J62|Y917_THET2 RecName: Full=UPF0173 metal-dependent hydrolase TT_C0917 gi|81600411|sp|Q5SIT1|Y1283_THET8 RecName: Full=UPF0173 metal-dependent hydrolase TTHA1283 gi|46196846|gb|AAS81261.1| metal dependent hydrolase [Thermus thermophilus HB27] gi|55772665|dbj|BAD71106.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 224 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 37/199 (18%) Query: 51 GSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIH---GIDGLRGYFLKQKR 104 T +++D TG L + D +L TH H DH + G + Sbjct: 16 DGKTRIVIDPFLTGNPMA--ALGVGEVQADLILVTHAHGDHFGDSVALSKKGGVVVSTFE 73 Query: 105 PIDVYAAPDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I YA K + + Y F+ + P + + GG+ + Sbjct: 74 -IATYAEKHGAKSVPMNLGGTYRFEGGWLKWVPAW--------HSSSFPDGTYGGMPMGV 124 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL-- 220 + RI + G+ A +D+ LD ++ HF++ Sbjct: 125 VVELGGKRI----YHAGDTALFSDMRLIGE------MGLDLALL------PIGDHFTMGP 168 Query: 221 SESLKKIELINPKNAILTH 239 ++LK +EL+ PK + H Sbjct: 169 EDALKALELLRPKKVVPIH 187 >gi|77414543|ref|ZP_00790688.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77159415|gb|EAO70581.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] Length = 559 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 Y N + + + G++ P G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTP----QGKVICTGDFKFD 170 >gi|116328458|ref|YP_798178.1| family transcription factor CAP [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116121202|gb|ABJ79245.1| CAP family transcription factor [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 719 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 23/180 (12%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--I 76 P I P++ + +S I ++ +G ++VD + + + V I Sbjct: 203 PIIGITCL--GPSHGFDPEDNTSGFIIWLNHQG----IMVDPPVNSTEWLRQSNVNPKLI 256 Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 + V+ TH HADH G + ++ I ++A + + K Sbjct: 257 NHVILTHCHADHDAGTFQK----ILEENKITIHATETVIDSFLRKYSALTKIPKKE---- 308 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPA 192 + + GG L I S+GF F + Y +D P Sbjct: 309 LQELFHFRPIIIGKATMINGGEFNFHYALH---SIPSVGFEFFFQDQSFIYTSDHLNEPE 365 >gi|58268610|ref|XP_571461.1| 3' tRNA processing endoribonuclease [Cryptococcus neoformans var. neoformans JEC21] gi|57227696|gb|AAW44154.1| 3' tRNA processing endoribonuclease, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1037 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 27/115 (23%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D T LG G+++ P R SS ++ S G +++D G Sbjct: 532 SDDIVVTTLGTGSAI----------------PSKYRNVSSTHLAIPSLGG----ILLDAG 571 Query: 62 PDFYMQV-------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 Q+ L+ + + V +H HADH G++ + + +Y Sbjct: 572 EGTLGQLKRRFGEGLKSILEELKMVFVSHMHADHHLGMNAVLEERFRLGINTPLY 626 >gi|219670323|ref|YP_002460758.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2] gi|219540583|gb|ACL22322.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2] Length = 872 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 14/61 (22%) Query: 41 SLKISRVSERGSNTTVIVDTGP-----DFYMQ-----VLREQVLSIDAVLYTHPHADHIH 90 + I E ++VDTGP D + +L+ + +DA++ THPH DH+ Sbjct: 602 CILIETPEE----IRIMVDTGPKTSTFDAGERVIVPYLLQRGIKRLDALILTHPHGDHVG 657 Query: 91 G 91 G Sbjct: 658 G 658 >gi|188587868|ref|YP_001920895.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E3 str. Alaska E43] gi|188498149|gb|ACD51285.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum E3 str. Alaska E43] Length = 554 Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 20/77 (25%) Query: 56 VIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V++D G F + ++R + + TH H DHI GI ++ Sbjct: 32 VVIDCGLAFPDEDLYGIDIIIPDVTYLIRNK-NKVKGFFITHGHEDHIGGIP-----YIL 85 Query: 102 QKRPIDVYAAPDCMKHL 118 Q+ + VYA + + Sbjct: 86 QQINVPVYATKLTLALI 102 >gi|329117830|ref|ZP_08246547.1| ribonuclease J 2 [Streptococcus parauberis NCFD 2020] gi|326908235|gb|EGE55149.1| ribonuclease J 2 [Streptococcus parauberis NCFD 2020] Length = 554 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 38/127 (29%), Gaps = 20/127 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + V TH HAD I + L + V+ + ++ L + F Sbjct: 57 ENKDKVQGVFLTHGHADAIGALPYLLSDV-----SVPVFGSELTIE-LAKLF-------- 102 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + D ++ G++ H SLG GN+ Y D Sbjct: 103 VKGNNNTKKFNNFHVVDSETEIEFKDGLVSF--FKTTHSIPESLGIVIGTDQGNIVYTGD 160 Query: 187 VNAFPAE 193 PA Sbjct: 161 FKFDPAA 167 >gi|169777791|ref|XP_001823361.1| metallo-beta-lactamase domain protein [Aspergillus oryzae RIB40] gi|83772098|dbj|BAE62228.1| unnamed protein product [Aspergillus oryzae] Length = 346 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 10/100 (10%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++ +++DTG + L + +SI VL TH H DH GI L Sbjct: 60 GSSRILIDTGEGSPQWALSVTRYLEDHDISISQVLLTHWHKDHTGGIADLLA----HDSN 115 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 I +Y L F+ D + +++ Sbjct: 116 ITIYKHMPDHGQLDIVNGQIFQTRDATLRAVLTPGHTVDH 155 >gi|326436123|gb|EGD81693.1| hypothetical protein PTSG_02406 [Salpingoeca sp. ATCC 50818] Length = 1004 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 94/317 (29%), Gaps = 91/317 (28%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISR----------VSERGSNTTVIV 58 +G G+++ P R + + ++R + ++++ Sbjct: 609 FMGTGSAV----------------PSQLRNVTGMLLTRGIWVDSDGATTVNKDVAASMLL 652 Query: 59 DTGPDFYMQVLR-EQVLSIDAVL-------YTHPHADHIHGIDGLRG------------- 97 D G Q+ R + AVL +H HADH G+ + Sbjct: 653 DCGEGSLSQLQRKFGAEHMPAVLRSLRLVHISHMHADHHLGLTRVLARRREAFAAVGVDD 712 Query: 98 ---------YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN--------- 139 +FL + + L + R PP V Sbjct: 713 PPPVVVVAPHFLWLFMRYTAHLSCATAVFLDARWTRFAHWQLPRFVPPHVKDAYARAMAG 772 Query: 140 --PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK 197 + V C + G V++ G+RF A+ D P +S+ Sbjct: 773 MGLRALATPAVKHCFAAYGLVLDF-----------DDGYRF---AWSGDTR--PCKSMVG 816 Query: 198 L-QNLDFLI-----IDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDY-DMV 249 + D L+ D L++ +H + S+++ + + K ILTH ++ Sbjct: 817 AGKGADVLVHEATFEDGLEDQAVQKNHSTTSDAVTVAQQMGAKMLILTHFSQRYPQIPVL 876 Query: 250 LKSTPSRVVPAFDGMQF 266 + FD M Sbjct: 877 DAKSREHTAFGFDLMSV 893 >gi|282854614|ref|ZP_06263949.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282582196|gb|EFB87578.1| conserved hypothetical protein [Propionibacterium acnes J139] Length = 563 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 32/190 (16%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF------RY 124 E++ + A++ TH H DHI + Y LK++ I +Y + + + Y Sbjct: 71 EKLARVKALVLTHGHEDHIGAV----PYLLKRRSDIPIYGSKLTLALVEAKLREHRIKGY 126 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV-- 181 + + + +E V + A A+ + G + + G F+ + Sbjct: 127 KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDAL----AVCVRTDAGTLINTGDFKMDQLPL 182 Query: 182 -AYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSSHFSLSESLKKIELI--NPKNAI 236 TD+ AF +L + +D ++D+ + S +E IE + K + Sbjct: 183 DGRITDLRAF-----ARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKL 237 Query: 237 LT-----HMH 241 + H+H Sbjct: 238 IVACFASHVH 247 >gi|222153245|ref|YP_002562422.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] gi|222114058|emb|CAR42450.1| metallo-beta-lactamase superfamily protein [Streptococcus uberis 0140J] Length = 554 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 43/133 (32%), Gaps = 21/133 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + V TH HAD I + L + V+ + ++ F + Sbjct: 57 ENKDKVQGVFLTHGHADAIGALPYLLSEV-----SVPVFGSELTIELAK-----LFVKAN 106 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + T N V+ D ++ G++ H SLG GN+ Y D Sbjct: 107 NST-KKFKNFHVV---DSETEIEFKDGLVSF--FKTTHSIPDSLGIVIGTDQGNIVYTGD 160 Query: 187 VNAFPAESLEKLQ 199 F + E Q Sbjct: 161 FK-FDQAAREFYQ 172 >gi|71032005|ref|XP_765644.1| hypothetical protein [Theileria parva strain Muguga] gi|68352601|gb|EAN33361.1| hypothetical protein TP01_0117 [Theileria parva] Length = 995 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 + D G + + ++D + TH H DH +G+ Y ++++P+++Y P Sbjct: 516 WLFDCGEGTKNGLESIGLDPLNVDRIFLTHLHGDHCYGVFSFL-YLREREKPLEIYGPP 573 >gi|71019129|ref|XP_759795.1| hypothetical protein UM03648.1 [Ustilago maydis 521] gi|46099470|gb|EAK84703.1| hypothetical protein UM03648.1 [Ustilago maydis 521] Length = 1307 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 82/304 (26%), Gaps = 92/304 (30%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY-- 65 T LG G++ P R S I S +++D G Y Sbjct: 747 TTLGTGSAA----------------PSKYRNVISTLIQTPSS----GNILLDAGESTYGL 786 Query: 66 --------------------MQVLREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLK 101 Q + + + + + +H HADH G + R + Sbjct: 787 LRRKFGCRRDGTAAESGSLVSQDVDDILRKMHVLFISHIHADHHIGVIRLLLERRKLVPR 846 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI----------- 150 +P+ ++ +L E + K D ++N + V Sbjct: 847 PDKPLYLFGTSFVHNYL-EEYEQLEKLGLDEDVILVLNDHLDHQKGVDPNLSNQQGLSAA 905 Query: 151 ---------------------CMKSAGGVIEAIPILQQHGRISSLGFRFG------NVAY 183 +K G+ H G +VAY Sbjct: 906 FANRNSCGQEQARQEHLAHVQAIKDLTGLSYIHTARVVHRGSHCYGLVVRHAMENWSVAY 965 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAIL 237 D P + ++ LI +A L + H + E+++ + N +L Sbjct: 966 SGDTRPAPEL-IAAGKDCSLLIHEATLEDGELDMAIAKGHSTFGEAIRVGHEMGAHNILL 1024 Query: 238 THMH 241 TH Sbjct: 1025 THFS 1028 >gi|322377823|ref|ZP_08052312.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] gi|321281246|gb|EFX58257.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. M334] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +D T + VI+ + + G H SLG G++ Y Sbjct: 105 GND-TVKKFNDFHVIDEDS-----EIDFGGTVVSFFRTTHSIPESLGVVLKTAEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|258624499|ref|ZP_05719443.1| metallo-beta-lactamase family protein [Vibrio mimicus VM603] gi|258583196|gb|EEW08001.1| metallo-beta-lactamase family protein [Vibrio mimicus VM603] Length = 438 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 8/80 (10%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ S R +++D G D + V ++ ++ TH H DHI + L Sbjct: 11 SVTGSCHELRSHGQALLIDCGLFQGADERPLEIDFAVNHLNGLVLTHAHIDHIGRLPWLL 70 Query: 97 GYFLKQKRPIDVYAAPDCMK 116 Q ++ + Sbjct: 71 AAGFNQ----PIFCTAATAE 86 >gi|240103399|ref|YP_002959708.1| Metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Thermococcus gammatolerans EJ3] gi|239910953|gb|ACS33844.1| Metal-dependent hydrolase/oxidoreductase, beta-lactamase family [Thermococcus gammatolerans EJ3] Length = 277 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 13/90 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I ++ DTG M++L SID V +H H DH G+ Sbjct: 27 SFLIEA-----DGKRILFDTGQSAEPILHNMKILGIDPASIDYVFLSHCHYDHTGGL--- 78 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 G R + V A P + F + Y Sbjct: 79 LGILKAIGRRVPVVAHPLIFRRHFITKPYL 108 >gi|157692130|ref|YP_001486592.1| metallo-beta lactamase superfamily hydrolase [Bacillus pumilus SAFR-032] gi|157680888|gb|ABV62032.1| possible metallo-beta lactamase superfamily hydrolase [Bacillus pumilus SAFR-032] Length = 555 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 44/150 (29%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ + E D K+A Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLHIFEEEDTIKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|54025838|ref|YP_120080.1| hypothetical protein nfa38680 [Nocardia farcinica IFM 10152] gi|54017346|dbj|BAD58716.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 693 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + +++ I A++ TH H DHI + + L+ + I V A + + Sbjct: 196 PDFRP--IEDRMDDIVAIVLTHGHEDHIGAV----PFLLRNRSDIPVLGAKFTLALVAA- 248 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + ++P +IE + ++ G E H +L Sbjct: 249 ----------KCREHRLHPKLIEVTE---GETTSHGPFECEYFAVNHSIPDALA 289 >gi|323341736|ref|ZP_08081969.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464161|gb|EFY09354.1| metallo-beta-lactamase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 621 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 46/129 (35%), Gaps = 23/129 (17%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCMKHLFESFR 123 Y ++R Q + A++ TH H DHI GI FL QK + +YA + Sbjct: 61 YAHLIRNQ-KKVKALVITHGHEDHIGGIP-----FLLQKVNVPQIYAPQFAKAQIERK-- 112 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----G 179 L++R I I+ D +K+ VI H +LG G Sbjct: 113 -----LEERK---IRTKHKIQEIDSKSTIKTKHFVIGF--FNVVHSIPDALGVLVNTPNG 162 Query: 180 NVAYCTDVN 188 + D Sbjct: 163 RIVSTGDFK 171 >gi|240116904|ref|ZP_04730966.1| putative hydrolase [Neisseria gonorrhoeae PID1] gi|268602580|ref|ZP_06136747.1| glyoxalase II family protein [Neisseria gonorrhoeae PID1] gi|268586711|gb|EEZ51387.1| glyoxalase II family protein [Neisseria gonorrhoeae PID1] Length = 210 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|256375341|ref|YP_003099001.1| DNA internalization-related competence protein ComEC/Rec2 [Actinosynnema mirum DSM 43827] gi|255919644|gb|ACU35155.1| DNA internalization-related competence protein ComEC/Rec2 [Actinosynnema mirum DSM 43827] Length = 770 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Query: 53 NTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR-----GYFLKQKR 104 V+VDTGPD + R V I V+ +H HADHI G+ + G Sbjct: 535 GRAVLVDTGPDPVPVLGCLRRLGVRRIPLVVLSHLHADHIGGLAEVLAEREVGAVAVGPA 594 Query: 105 PIDVYAAPDCMKHLFES 121 + +A + + + Sbjct: 595 RVPGWAWAEVVARTRSA 611 >gi|55821196|ref|YP_139638.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55823106|ref|YP_141547.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] gi|55737181|gb|AAV60823.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus LMG 18311] gi|55739091|gb|AAV62732.1| metallo-beta-lactamase superfamily protein [Streptococcus thermophilus CNRZ1066] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q + V+ + ++ L + F Sbjct: 55 LVENKDRIQGIFLTHGHADAIGALP-----YILQDAKVPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + N VI+ ++ I A LG GN+ Y D Sbjct: 103 VKNAGVNKFNNFHVID-SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFK 161 >gi|219668813|ref|YP_002459248.1| beta-lactamase [Desulfitobacterium hafniense DCB-2] gi|219539073|gb|ACL20812.1| beta-lactamase domain protein [Desulfitobacterium hafniense DCB-2] Length = 570 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 17/85 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHG 91 SS + V++D G + L+E ++AV+ TH H DH Sbjct: 15 SSYLVE-----SEGYRVLIDCGLFQGSKALKELNYGDFPYNPAELNAVILTHAHTDHSGL 69 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMK 116 I L Y + K +YA P+ +K Sbjct: 70 IPKLIKYGFQGK----IYATPETIK 90 >gi|116627921|ref|YP_820540.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus thermophilus LMD-9] gi|116101198|gb|ABJ66344.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus thermophilus LMD-9] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q + V+ + ++ L + F Sbjct: 55 LVENKDRIQGIFLTHGHADAIGALP-----YILQDAKVPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + N VI+ ++ I A LG GN+ Y D Sbjct: 103 VKNAGVNKFNNFHVID-SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFK 161 >gi|313889855|ref|ZP_07823497.1| ribonuclease J 1 [Streptococcus pseudoporcinus SPIN 20026] gi|313121900|gb|EFR44997.1| ribonuclease J 1 [Streptococcus pseudoporcinus SPIN 20026] Length = 561 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRDS 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 + Y I + + ++ + I + H G+I G F+F Sbjct: 120 KMYE-INHNTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFD 170 >gi|260941225|ref|XP_002614779.1| hypothetical protein CLUG_05557 [Clavispora lusitaniae ATCC 42720] gi|238851965|gb|EEQ41429.1| hypothetical protein CLUG_05557 [Clavispora lusitaniae ATCC 42720] Length = 359 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 9/104 (8%) Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDD 131 + + +VL THPH DHI + +Q R P+ V + + L +D Sbjct: 114 IGQVHSVLVTHPHLDHIAALVLNSPGLQRQGRAPLTVCGSQFTIDGLRN------HVFND 167 Query: 132 RTYPPIVNPIVIENNDV--PICMKSAGGVIEAIPILQQHGRISS 173 +P +++P ++E V + + + HGR + Sbjct: 168 SVWPDLISPGLLELRKVKPTLPFSTPKEIFTVTMFEISHGRGAC 211 >gi|169828655|ref|YP_001698813.1| hypothetical protein Bsph_3172 [Lysinibacillus sphaericus C3-41] gi|168993143|gb|ACA40683.1| Protein yflN [Lysinibacillus sphaericus C3-41] Length = 281 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 12/98 (12%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQVL-SIDAVLYTHPHADHIHGIDGLR 96 I + + V++D G P +++ R A++ TH H DH+ GI L Sbjct: 41 IVLYGDPNTKEFVLIDAGMPKSAEEIISVVEERFGSNAQPKAIILTHGHFDHVGGIIELI 100 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ++ I VYA + +L + Y + Sbjct: 101 -----KRWNIPVYAHALEIPYLTGTQDYPVADPAVSSG 133 >gi|166031232|ref|ZP_02234061.1| hypothetical protein DORFOR_00919 [Dorea formicigenerans ATCC 27755] gi|166029079|gb|EDR47836.1| hypothetical protein DORFOR_00919 [Dorea formicigenerans ATCC 27755] Length = 547 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L+ + + + TH H DHI + Sbjct: 22 EDSIIVVDCGLAFPEDGMLGIDLVIPDVTYLKNNIEKVKGFVITHGHEDHIGALS----- 76 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 ++ ++ I +YA M + + Sbjct: 77 YILREINIPIYATKLTMGIIEKK 99 >gi|312278507|gb|ADQ63164.1| Metallo-beta-lactamase superfamily protein [Streptococcus thermophilus ND03] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q + V+ + ++ L + F Sbjct: 55 LVENKDRIQGIFLTHGHADAIGALP-----YILQDAKVPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + N VI+ ++ I A LG GN+ Y D Sbjct: 103 VKNAGVNKFNNFHVID-SETEIEFDDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFK 161 >gi|317056310|ref|YP_004104777.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] gi|315448579|gb|ADU22143.1| RNA-metabolising metallo-beta-lactamase [Ruminococcus albus 7] Length = 614 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 17/78 (21%) Query: 50 RGSNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLR 96 SN ++D G F ++L + + + V+ TH H DHI G+ Sbjct: 84 ECSNDMFVIDCGLAFPDSEMLGVDIVIPDFTYVEKNLEKMRGVVITHGHEDHIGGL---- 139 Query: 97 GYFLKQKRPIDVYAAPDC 114 YFLK+ + VY Sbjct: 140 PYFLKKFPGVPVYGTRLT 157 >gi|326792301|ref|YP_004310122.1| beta-lactamase [Clostridium lentocellum DSM 5427] gi|326543065|gb|ADZ84924.1| beta-lactamase domain protein [Clostridium lentocellum DSM 5427] Length = 413 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGPDFYMQ----VLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 N +++D G + Q L+E V ++ V+ THPHADHI G+D + Sbjct: 100 ENQAMLIDGGDNDDEQRVVNYLKEQGVSELEYVIATHPHADHIGGLDAV 148 >gi|258646763|ref|ZP_05734232.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] gi|260404189|gb|EEW97736.1| metallo-beta-lactamase family protein [Dialister invisus DSM 15470] Length = 270 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY----MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ I N +++DTG + + + +ID + +H H DH +G++ Sbjct: 22 SIYIEY-----ENKKILLDTGASALFVENAKAMDIPLENIDFGILSHAHYDHANGME--- 73 Query: 97 GYFLKQKRPIDVY----AAPDCMKHLFESFRYCFKALD 130 YF K+ R Y A +C + FRY D Sbjct: 74 -YFFKRNRHAKFYLQKSCAENCYAYEEGRFRYIGIPKD 110 >gi|76787188|ref|YP_330380.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76562245|gb|ABA44829.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] Length = 559 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 Y N + + + G++ P G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTP----QGKVICTGDFKFD 170 >gi|85708736|ref|ZP_01039802.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. NAP1] gi|85690270|gb|EAQ30273.1| metallo-beta-lactamase hydrolase subunit [Erythrobacter sp. NAP1] Length = 555 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 29/141 (20%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F ++ + E+ + ++ TH H DHI + Sbjct: 32 DGKWLMVDLGMTFSGGEYPGVDLVFADLEFIEERTKDLLGIVLTHAHEDHIGAVP----- 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + + +YA P + + L++ V +IE + + G Sbjct: 87 YFAGELGVPLYATPFTADLVA-------RKLEEAGLLGKVELNIIEEDHGQFDI----GP 135 Query: 159 IEAIPILQQHGRISSLGFRFG 179 + H Sbjct: 136 FSVTYLPLAHSIAEGNALLID 156 >gi|77406197|ref|ZP_00783267.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77412348|ref|ZP_00788660.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77161604|gb|EAO72603.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77175191|gb|EAO77990.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 559 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNPIV------IENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 Y N + + + G++ P G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLSVTFFRTTHSIPEPLGIVIHTP----QGKVICTGDFKFD 170 >gi|222823901|ref|YP_002575475.1| hydrolase (metallo-beta-lactamase family) [Campylobacter lari RM2100] gi|222539123|gb|ACM64224.1| conserved hypothetical protein, putative hydrolase (metallo-beta-lactamase family) [Campylobacter lari RM2100] Length = 199 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 15/114 (13%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +N +I+D G + Y ++E A+L TH H DH++ D + +K I ++ Sbjct: 19 DHNNKQIIIDPGENAYK-FIKENTSKPLAILNTHGHYDHVY--DNAK---VKMAYEIPIF 72 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 D L +SF Y F+ N V+ N+ + P Sbjct: 73 IHKDDAFMLKDSFNYGFEHS---------NADVLIENENEFSIDEFKFKFHHFP 117 >gi|313837490|gb|EFS75204.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314929298|gb|EFS93129.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314971697|gb|EFT15795.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] Length = 237 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 47/208 (22%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + + +R V+VD P Q + +DA+L TH H DH+ Sbjct: 31 SCILVEAAGQR-----VLVD--PGNLSQSW-HGLTDLDAILVTHRHPDHV---------- 72 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGG 157 P+ + L ++ ++ P ++ VI DV G Sbjct: 73 -----------DPEHIGALVDANSGAVVRAEEGACREIPALDADVIAPGDV-----LQIG 116 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALKN 211 + + H I GNV Y + P + L++ + +D L A Sbjct: 117 EVRIEAVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA--- 173 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 H+ +++E++ + ++ L H Sbjct: 174 --HAPWAAMNETVDFARSVGARHGFLIH 199 >gi|88607873|ref|YP_505594.1| metallo-beta-lactamase family protein [Anaplasma phagocytophilum HZ] gi|88598936|gb|ABD44406.1| metallo-beta-lactamase family, beta-CASP subfamily [Anaplasma phagocytophilum HZ] Length = 543 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 19/137 (13%) Query: 53 NTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++D G F +RE+ + V+ TH H DHI I Sbjct: 30 GKWIMIDLGAGFADPDSMPGVDLVVADISFIRERRKDLVGVVLTHAHEDHIGAIP----- 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L + +YA + + P V + + M + Sbjct: 85 YLWEDLRCPIYATKFTASFVRSKVEQFSLNIPIVEVDPGVPLELGPFTLEFVSMTHSIPE 144 Query: 159 IEAIPILQQHGRISSLG 175 + +I + G + G Sbjct: 145 MHSIAVRTDLGSVLHTG 161 >gi|258508306|ref|YP_003171057.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|257148233|emb|CAR87206.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus GG] gi|259649623|dbj|BAI41785.1| putative hydrolase [Lactobacillus rhamnosus GG] Length = 560 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I A++ TH H DHI GI YFL+Q Sbjct: 35 IVIDAGIKFPEDDLLGIDYVISDYSYLVQNKDKIKALVITHGHEDHIGGI----PYFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + Sbjct: 91 VPNVPIYAGPLAAALIR 107 >gi|238019136|ref|ZP_04599562.1| hypothetical protein VEIDISOL_00999 [Veillonella dispar ATCC 17748] gi|237863835|gb|EEP65125.1| hypothetical protein VEIDISOL_00999 [Veillonella dispar ATCC 17748] Length = 314 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 79/218 (36%), Gaps = 30/218 (13%) Query: 57 IVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++DTG + Q+ V + V+ THPHADH+ G F + + + Sbjct: 81 MIDTGDIEHRENIVAQLKSMGVTKLKNVIITHPHADHMGG-------FYAIAKAMPI--- 130 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA---IPILQQH 168 +K + + + + DV A V+ A P+ + Sbjct: 131 EHVYDDGISVDNNMYKTYEKWIDKNKIQRSTLRSGDVVDFGHGAVFVVYAPWTEPLTDKK 190 Query: 169 G-----RISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDF-LIIDALKNGLHSSHFSLS 221 G S +G FG + +A E + ++ + L LK G H S S S Sbjct: 191 GAPDLNNNSIVGKLIFGKFSMLFTGDAELQEEKKLIKEQNSRLFARVLKVGHHGSRTSSS 250 Query: 222 ESLKKIELINPKNAILTH---MHVDLDYDMVLKSTPSR 256 E ++ I P++A++++ +D+ L+ Sbjct: 251 E--DFLKSIKPESALISNGMYNSYGHPHDVTLRRLQEN 286 >gi|294790514|ref|ZP_06755672.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304] gi|294458411|gb|EFG26764.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304] Length = 612 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 24/169 (14%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +R ++ ++A++ TH H DHI + Y L Sbjct: 85 LLIDCGVLFPEEEQPGVDLILPDF--SYIRSRLDKVEALVLTHGHEDHIGAV----PYLL 138 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +++ I + + + + R V N I + + Sbjct: 139 RERPDIPLIGSKLTLAFVEAKCREHHIDPIMNPVQGRDKMKVGPFNLEFITVTHSIPDAL 198 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIID 207 A+ + G I G + D +L Q +D L+ D Sbjct: 199 AVSVKTPAGHIIDTGDMKLDQLPL-DHKITDLREFARLGEQGVDLLMAD 246 >gi|199598168|ref|ZP_03211590.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus rhamnosus HN001] gi|258539519|ref|YP_003174018.1| metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] gi|199590929|gb|EDY99013.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus rhamnosus HN001] gi|257151195|emb|CAR90167.1| Metallo-beta-lactamase superfamily protein [Lactobacillus rhamnosus Lc 705] Length = 560 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I A++ TH H DHI GI YFL+Q Sbjct: 35 IVIDAGIKFPEDDLLGIDYVISDYSYLVQNKDKIKALVITHGHEDHIGGI----PYFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + Sbjct: 91 VPNVPIYAGPLAAALIR 107 >gi|118404222|ref|NP_001072425.1| beta-lactamase-like protein 2 [Xenopus (Silurana) tropicalis] gi|123906164|sp|Q0V9A9|LACB2_XENTR RecName: Full=Beta-lactamase-like protein 2 gi|111305812|gb|AAI21667.1| lactamase, beta 2 [Xenopus (Silurana) tropicalis] Length = 289 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E SI ++ TH H DH+ GI + Sbjct: 40 GPRRILIDTGEPAVPEYISCLKQALTEFNTSIQEIIVTHWHVDHVGGIADI 90 >gi|238855237|ref|ZP_04645556.1| ribonuclease J 2 [Lactobacillus jensenii 269-3] gi|260664597|ref|ZP_05865449.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|282932470|ref|ZP_06337895.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] gi|238832129|gb|EEQ24447.1| ribonuclease J 2 [Lactobacillus jensenii 269-3] gi|260561662|gb|EEX27634.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii SJ-7A-US] gi|281303419|gb|EFA95596.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] Length = 579 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 20/135 (14%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I + TH HAD I + ++ + ID++ + ++ L+ + Sbjct: 62 DKIAGIFLTHGHADSIGALP-----YILRGHDIDIFGSELTIE---------LAKLEVQR 107 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA 189 + D + + H SLG G + Y D Sbjct: 108 ENHRRKNHLFHVIDAETEIDFRNASVSF--FHTTHSIPDSLGIVVHTPAGGIVYTGDFKF 165 Query: 190 FPAESLEKLQNLDFL 204 P+ S ++D L Sbjct: 166 DPSASEHYRTDMDRL 180 >gi|326484396|gb|EGE08406.1| metallo-beta-lactamase domain-containing protein [Trichophyton equinum CBS 127.97] Length = 294 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Query: 54 TTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++DTG Q L + ++ L TH H DH+ G+ LR + Sbjct: 44 KRLLIDTGEGRPSWSVALQQTLTSERATVSHALLTHWHHDHVGGVRDLRRICPDVQ 99 >gi|289618712|emb|CBI54778.1| unnamed protein product [Sordaria macrospora] Length = 607 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 33/167 (19%) Query: 62 PDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC----- 114 PD + R A L +H H DH+ G+D LR F VY + Sbjct: 12 PDIRVDFFRYHPNRRPPLACLLSHVHTDHLAGLDTLRSPF--------VYCSAATREILL 63 Query: 115 -MKHLFESFRYCFKALDDR--TYPPIVNPIVIENNDVPICMK-SAGGVIEAIPILQQHGR 170 ++ + Y L+ R +Y + N + D P+ ++ G I+ + H Sbjct: 64 SLETVSRRINYAQGTLEARQLSYKHLKNLLKPLPLDTPVELELEPGNHIQVTLLDANHCP 123 Query: 171 ISSLGFRF---GNVA-YCTDVNAFP---------AESLEKLQNLDFL 204 + + F F G A Y D+ + P ++ L L Sbjct: 124 GAVM-FLFEGQGKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLKTL 169 >gi|302542928|ref|ZP_07295270.1| metal-dependent hydrolase [Streptomyces hygroscopicus ATCC 53653] gi|302460546|gb|EFL23639.1| metal-dependent hydrolase [Streptomyces himastatinicus ATCC 53653] Length = 246 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 79/252 (31%), Gaps = 54/252 (21%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSL-KISRVSERGSNTTVIVDTGP 62 T+LG CGA W D S + R +++D G Sbjct: 1 MRLTVLGGCGA----------WPTADQA--------CSGYLVEYAGFR-----LLIDPGY 37 Query: 63 DFYMQVLREQ-VLSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHL 118 ++L+ V ++DAVL +H H DH ++ L RG P+ V+A + + Sbjct: 38 ATLPRLLQHGTVDAVDAVLISHGHPDHCADLNPLLRARGLSDDPPPPLPVHAPHGAVDAV 97 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 P + ++ + G L H + + G R Sbjct: 98 LA------------LDKPTMLAGAYRLHEFTPGDRFEIGPFTTDTWLLPHF-VPNAGLRL 144 Query: 179 GN----VAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSH-----FSLSESLKKIE 228 +AY D P + +L + D + +A + + + + Sbjct: 145 TTPGAVLAYTGDTGPSPD--IPRLARGADLFLAEATYVHQVPTGDAPYLLTARLAGQYAH 202 Query: 229 LINPKNAILTHM 240 +LTH+ Sbjct: 203 QAGAARLMLTHL 214 >gi|226326523|ref|ZP_03802041.1| hypothetical protein PROPEN_00372 [Proteus penneri ATCC 35198] gi|225205122|gb|EEG87476.1| hypothetical protein PROPEN_00372 [Proteus penneri ATCC 35198] Length = 272 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLR 96 SL + + ++ DTG D F + + ++ ++ +H H DH G+ L+ Sbjct: 24 SLLLE---DDECQAKILFDTGKDLTFISNAKKMGIDLTTLKTIVVSHGHYDHFGGLTHLQ 80 Query: 97 GYFLKQKRPI 106 F K I Sbjct: 81 ANFFTHKPRI 90 >gi|187920288|ref|YP_001889319.1| beta-lactamase domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718726|gb|ACD19949.1| beta-lactamase domain protein [Burkholderia phytofirmans PsJN] Length = 477 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 S +++D G + ++ L V ++DAV+ TH H DH + Sbjct: 20 EASGMRILIDCGLFQGTKNLRLRNWSPLPVPVDTLDAVILTHAHIDHTG----YLPVLAR 75 Query: 102 QKRPIDVYAAPDCMK 116 VY P Sbjct: 76 DGYRGPVYCTPGTAA 90 >gi|116492906|ref|YP_804641.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus pentosaceus ATCC 25745] gi|116103056|gb|ABJ68199.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Pediococcus pentosaceus ATCC 25745] Length = 585 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + YFLK+ + V+ + + + Sbjct: 71 LVENKEKIVGVFLTHGHADAIGAL----PYFLKEIN-VPVFGSEMTIALAKIT------V 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 DD N V+++ + G + H SLG G + Y Sbjct: 120 NDDPELKAFDNFHVVDDKK-----EIDFGDVTVSFFKTTHTIPESLGIVLSCTEGQIVYT 174 Query: 185 TDVN 188 D Sbjct: 175 GDFK 178 >gi|332185948|ref|ZP_08387695.1| RNA-metabolising metallo-beta-lactamase family protein [Sphingomonas sp. S17] gi|332014306|gb|EGI56364.1| RNA-metabolising metallo-beta-lactamase family protein [Sphingomonas sp. S17] Length = 544 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 54/184 (29%), Gaps = 45/184 (24%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 V+VD G F + +++ + ++ TH H DHI + Sbjct: 28 EGKWVMVDCGITFADPAYPGIDVILPDLSFIEDRLDDLVGIVLTHGHEDHIGALP----- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L + + +YA + L++ V VIE G Sbjct: 83 YLAEDLGVPIYATAFTAGLVR-------GKLEEEGSANRVKLRVIEPGKA-----FEVGP 130 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTD-------VNAFPAESLEKL----QNLDF 203 + + H + G V + D V PA + + +D Sbjct: 131 FDFTFVPLSHSIPEANALLIETAVGRVFHTGDWKLDQTPVIGKPASPAQLASIGDRGVDI 190 Query: 204 LIID 207 L+ D Sbjct: 191 LVCD 194 >gi|314923873|gb|EFS87704.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966070|gb|EFT10169.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314981843|gb|EFT25936.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315090768|gb|EFT62744.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315094920|gb|EFT66896.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315104242|gb|EFT76218.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|327328051|gb|EGE69820.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL103PA1] Length = 557 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 32/190 (16%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF------RY 124 E++ + A++ TH H DHI + Y LK++ I +Y + + + Y Sbjct: 65 EKLARVKALVLTHGHEDHIGAV----PYLLKRRSDIPIYGSKLTLALVEAKLREHRIKGY 120 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV-- 181 + + + +E V + A A+ + G + + G F+ + Sbjct: 121 KLNVVHEGDVAEVGEQFDLEFIAVNHSIPDAL----AVCVRTDAGTLINTGDFKMDQLPL 176 Query: 182 -AYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSSHFSLSESLKKIELI--NPKNAI 236 TD+ AF +L + +D ++D+ + S +E IE + K + Sbjct: 177 DGRITDLRAF-----ARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKL 231 Query: 237 LT-----HMH 241 + H+H Sbjct: 232 IVACFASHVH 241 >gi|312875512|ref|ZP_07735515.1| ribonuclease Z [Lactobacillus iners LEAF 2053A-b] gi|311089023|gb|EFQ47464.1| ribonuclease Z [Lactobacillus iners LEAF 2053A-b] Length = 308 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SS + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKGRNVSSTALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + I + +H H DHI G+ GL R + + +Y + + Sbjct: 43 QHQILETNIKPRKITKIFISHNHGDHIFGLPGLLSSRSFQ-GDSGSLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + TYP + ++++++ + K H RI S GFR Sbjct: 102 ISLK---VSKTKITYP--IKYVILKDDGIIFEDK----QFAVFTAKLDH-RIESYGFRV 150 >gi|259500673|ref|ZP_05743575.1| ribonuclease Z [Lactobacillus iners DSM 13335] gi|302191362|ref|ZP_07267616.1| ribonuclease Z [Lactobacillus iners AB-1] gi|309804148|ref|ZP_07698226.1| ribonuclease Z [Lactobacillus iners LactinV 11V1-d] gi|312871372|ref|ZP_07731467.1| ribonuclease Z [Lactobacillus iners LEAF 3008A-a] gi|312873995|ref|ZP_07734031.1| ribonuclease Z [Lactobacillus iners LEAF 2052A-d] gi|315653492|ref|ZP_07906413.1| ribonuclease Z [Lactobacillus iners ATCC 55195] gi|329921300|ref|ZP_08277738.1| ribonuclease Z [Lactobacillus iners SPIN 1401G] gi|259168057|gb|EEW52552.1| ribonuclease Z [Lactobacillus iners DSM 13335] gi|308163731|gb|EFO66000.1| ribonuclease Z [Lactobacillus iners LactinV 11V1-d] gi|311090544|gb|EFQ48952.1| ribonuclease Z [Lactobacillus iners LEAF 2052A-d] gi|311093025|gb|EFQ51374.1| ribonuclease Z [Lactobacillus iners LEAF 3008A-a] gi|315489183|gb|EFU78824.1| ribonuclease Z [Lactobacillus iners ATCC 55195] gi|328934592|gb|EGG31096.1| ribonuclease Z [Lactobacillus iners SPIN 1401G] Length = 308 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SS + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKGRNVSSTALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + I + +H H DHI G+ GL R + + +Y + + Sbjct: 43 QHQILETNIKPRKITKIFISHNHGDHIFGLPGLLSSRSFQ-GDSGSLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + TYP + ++++++ + K H RI S GFR Sbjct: 102 ISLK---VSKTKITYP--IKYVILKDDGIIFEDK----QFAVFTAKLDH-RIESYGFRV 150 >gi|227889776|ref|ZP_04007581.1| metallo-beta-lactamase [Lactobacillus johnsonii ATCC 33200] gi|227849640|gb|EEJ59726.1| metallo-beta-lactamase [Lactobacillus johnsonii ATCC 33200] Length = 559 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 33 IIMDCGIKFPEDDMMGINYVISDYSYLAKNRKKIKALVVTHGHEDHIGGI----PYLLKK 88 Query: 103 KRPIDVYAAPDCMKHLF 119 I VYA P + + Sbjct: 89 IPEIPVYATPFALALIR 105 >gi|118472017|ref|YP_887020.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] gi|118173304|gb|ABK74200.1| metallo-beta-lactamase superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 558 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PD + +++ I+A++ TH H DHI I + LK + I V + + + E Sbjct: 62 PDLRH--IEDRLDEIEALVVTHAHEDHIGAI----PFLLKLRPDIPVVGSKFTIALVRE- 114 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 K + R P V +V S GV E H L Sbjct: 115 -----KCREHRLKPKFV--------EVAERQSSQHGVFECEYFAVNHSIPGCLA 155 >gi|325662348|ref|ZP_08150957.1| hypothetical protein HMPREF0490_01696 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471350|gb|EGC74573.1| hypothetical protein HMPREF0490_01696 [Lachnospiraceae bacterium 4_1_37FAA] Length = 536 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 52 SNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G PD Y Q + V ID VL TH H DH G+ L Q + + Sbjct: 22 NGKHILIDCGMEQGPDLYENQEIPVAVGEIDYVLLTHAHIDH-SGLIPLLAKRGFQGQIV 80 Query: 107 DVYAAPDCMKHLFE 120 +A D + + Sbjct: 81 TTFATADLCQIMLR 94 >gi|311268445|ref|XP_003132058.1| PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Sus scrofa] Length = 465 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 44/254 (17%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID-------AVLYTHPHADHIHGIDGL-----RGYF 99 S+TT+++D G + Q+ R +D AV +H HADH G+ + R Sbjct: 149 SDTTLLLDCGEGTFGQLCRHYGDDVDRVLGALAAVFVSHLHADHHTGLLNILLQRERALA 208 Query: 100 LKQK--RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP---IVNPIVIENNDVPICMKS 154 + RP+ V A L + +C + L + P + + N D+ + Sbjct: 209 SLGRPLRPLLVVAPTQLRTWLQQYHNHCQQVLQHVSVIPAKCLQQGAEVSNPDIERLISL 268 Query: 155 AG---GVIEAIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKL-QNLDF 203 G+ E L +H + + G++ + Y D P E+L ++ ++ Sbjct: 269 LLETCGLKEFQTCLVRHCKHAFGCALVHPSGWK---LVYSGDT--MPCEALVQMGKDATL 323 Query: 204 LI-----IDALKNGL-HSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP--- 254 LI D L+ +H + S+++ ++ + +L H Y + +P Sbjct: 324 LIHEATLEDGLEEEAVEKTHSTTSQAIGVGMRMHAEFILLNHFSQR--YAKIPLFSPDFT 381 Query: 255 SRVVPAFDGMQFSS 268 +V AFD M+ S Sbjct: 382 EKVGIAFDHMKVSL 395 >gi|289426364|ref|ZP_06428107.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289428694|ref|ZP_06430377.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|289153092|gb|EFD01810.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289158092|gb|EFD06312.1| conserved hypothetical protein [Propionibacterium acnes J165] Length = 563 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 38 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 93 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 94 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHS 153 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 154 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 204 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 205 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 247 >gi|259500702|ref|ZP_05743604.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|302191392|ref|ZP_07267646.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus iners AB-1] gi|309803975|ref|ZP_07698058.1| ribonuclease J 1 [Lactobacillus iners LactinV 11V1-d] gi|309805323|ref|ZP_07699373.1| ribonuclease J 1 [Lactobacillus iners LactinV 09V1-c] gi|309809276|ref|ZP_07703145.1| ribonuclease J 1 [Lactobacillus iners SPIN 2503V10-D] gi|312871437|ref|ZP_07731532.1| ribonuclease J 1 [Lactobacillus iners LEAF 3008A-a] gi|312872379|ref|ZP_07732449.1| ribonuclease J 1 [Lactobacillus iners LEAF 2062A-h1] gi|312873962|ref|ZP_07733998.1| ribonuclease J 1 [Lactobacillus iners LEAF 2052A-d] gi|312875490|ref|ZP_07735493.1| ribonuclease J 1 [Lactobacillus iners LEAF 2053A-b] gi|315653463|ref|ZP_07906384.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|325911480|ref|ZP_08173891.1| ribonuclease J 1 [Lactobacillus iners UPII 143-D] gi|325912840|ref|ZP_08175218.1| ribonuclease J 1 [Lactobacillus iners UPII 60-B] gi|329921347|ref|ZP_08277785.1| ribonuclease J 1 [Lactobacillus iners SPIN 1401G] gi|259168086|gb|EEW52581.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners DSM 13335] gi|308163977|gb|EFO66241.1| ribonuclease J 1 [Lactobacillus iners LactinV 11V1-d] gi|308165323|gb|EFO67556.1| ribonuclease J 1 [Lactobacillus iners LactinV 09V1-c] gi|308170389|gb|EFO72413.1| ribonuclease J 1 [Lactobacillus iners SPIN 2503V10-D] gi|311089001|gb|EFQ47442.1| ribonuclease J 1 [Lactobacillus iners LEAF 2053A-b] gi|311090511|gb|EFQ48919.1| ribonuclease J 1 [Lactobacillus iners LEAF 2052A-d] gi|311092202|gb|EFQ50576.1| ribonuclease J 1 [Lactobacillus iners LEAF 2062A-h1] gi|311093090|gb|EFQ51439.1| ribonuclease J 1 [Lactobacillus iners LEAF 3008A-a] gi|315489154|gb|EFU78795.1| metallo-beta-lactamase superfamily protein [Lactobacillus iners ATCC 55195] gi|325476680|gb|EGC79835.1| ribonuclease J 1 [Lactobacillus iners UPII 143-D] gi|325477833|gb|EGC80967.1| ribonuclease J 1 [Lactobacillus iners UPII 60-B] gi|328934639|gb|EGG31143.1| ribonuclease J 1 [Lactobacillus iners SPIN 1401G] Length = 559 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 29/133 (21%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI + LK+ Sbjct: 33 IIMDCGIKFPEDGEMGINYIISDYSYLIKNREKIKALVVTHGHEDHIGGI----PFLLKK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I VYA P + + LD+ I+ V+ ++ + + Sbjct: 89 IPEIPVYATPFALALIR-------GKLDEHG---ILKNSVLHEEYEDTVLQFSKLSVTF- 137 Query: 163 PILQQHGRISSLG 175 H +LG Sbjct: 138 -FRTTHSIPDTLG 149 >gi|221230273|ref|YP_002503689.1| hypothetical protein MLBr_01512 [Mycobacterium leprae Br4923] gi|219933380|emb|CAR71607.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length = 558 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 21/82 (25%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLSPGHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 + LK + I V + + Sbjct: 91 --PFLLKLRSDIPVVGSKFTLA 110 >gi|150018945|ref|YP_001311199.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905410|gb|ABR36243.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 571 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 18/80 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F + L + + + TH H DHI G+ Y Sbjct: 45 DNEIIVIDCGLAFPDEDLYGIDIVIPDVTYLIKNKNKVKGIFITHGHEDHIGGL----PY 100 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 LKQ + +Y + + Sbjct: 101 VLKQIN-VPIYGTRLTLGLI 119 >gi|332180242|gb|AEE15930.1| RNA-metabolising metallo-beta-lactamase [Treponema brennaborense DSM 12168] Length = 513 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGP--DFYMQVLREQ------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++D G + R+ V I++V+ TH H DH L K Sbjct: 24 DGRAFMIDCGAFQGRRNEADRKNRNFEVPVDKIESVILTHAHYDHCG----LLPLVGKNG 79 Query: 104 RPIDVYAAPDCMK 116 ++YA P Sbjct: 80 YNGNIYATPATRD 92 >gi|313836603|gb|EFS74317.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2] gi|314928112|gb|EFS91943.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1] gi|314972111|gb|EFT16208.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3] gi|328907597|gb|EGG27361.1| Zn-dependent hydrolase [Propionibacterium sp. P08] Length = 563 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 35/180 (19%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 38 NGEMLLIDCGVLFPEDDHPGVDLLLPGLDYLDEETLSKVKALVLTHGHEDHIGAV----P 93 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 94 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHS 153 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKLQNLDFLIID 207 + A A+ + G + + G F+ + TD+ AF E +D ++D Sbjct: 154 IPDAL----AVCVRTDAGILINTGDFKMDQLPLDGRITDLRAFARLGEE---GVDLFMVD 206 >gi|299747466|ref|XP_002911172.1| hypothetical protein CC1G_14603 [Coprinopsis cinerea okayama7#130] gi|298407532|gb|EFI27678.1| hypothetical protein CC1G_14603 [Coprinopsis cinerea okayama7#130] Length = 390 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 51/186 (27%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T LG ++ P++ +N S + R + I D G Sbjct: 12 QSLGITFLGTASAQ-------------PSSTRNH----SAL----ALRLNRDVWIFDCGE 50 Query: 63 DFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---------------- 104 Q+ + ++ I+ V TH H DHI G+ L + Sbjct: 51 ATQHQLQKSTVKMGKIEKVFITHTHGDHIFGLVPLLASCMNGAGGVVEEQGQGEDPRRVV 110 Query: 105 -----PIDVYAAPDCMKHLFESFRYCFKALDDRTYP------PIVNPIVIENNDVPICMK 153 P+++Y ++ + C L R Y P I + P + Sbjct: 111 DTSIPPLEIYGPMGTRAYIRSALA-CTYTLLGRPYVVHELRFPSDPEGDIAHGFTPPPAE 169 Query: 154 SAGGVI 159 SAG I Sbjct: 170 SAGRNI 175 >gi|238926940|ref|ZP_04658700.1| competence protein EC [Selenomonas flueggei ATCC 43531] gi|238885174|gb|EEQ48812.1| competence protein EC [Selenomonas flueggei ATCC 43531] Length = 811 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 55/198 (27%), Gaps = 28/198 (14%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 +L V +D + +H H DH G + + V Y Sbjct: 592 LLHYGVREVDYIFLSHAHEDHAAGAGAILS-------RLPV---KHVYTADEGRHAYAMS 641 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI------PILQQHGRISSLGFRF--G 179 P + D G +E + P+ G S +R G Sbjct: 642 MRLGDANPLLSKLSRAAAGD---TFVLDGVTVEVLYAPALDPLDNATGNEVSNVYRIRYG 698 Query: 180 NVAYCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + ++ + L D LK H SH S SE + I ++P A+ Sbjct: 699 DASFLFTGDLIREHEQRMLAAGTDA-SATVLKIPHHGSHTSSSE--EFIRAVHPMYAVYC 755 Query: 239 ---HMHVDLDYDMVLKST 253 + V++ Sbjct: 756 VGAGNSFGHPHADVVERY 773 >gi|229552103|ref|ZP_04440828.1| metallo-beta-lactamase [Lactobacillus rhamnosus LMS2-1] gi|229314536|gb|EEN80509.1| metallo-beta-lactamase [Lactobacillus rhamnosus LMS2-1] Length = 560 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I A++ TH H DHI GI YFL+Q Sbjct: 35 IVIDAGIKFPEDDLLGIDYVISDYSYLVQNKDKIKALVITHGHEDHIGGI----PYFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + Sbjct: 91 VPNVPIYAGPLAAALIR 107 >gi|331086151|ref|ZP_08335233.1| hypothetical protein HMPREF0987_01536 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406310|gb|EGG85824.1| hypothetical protein HMPREF0987_01536 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 536 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 52 SNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G PD Y Q + V ID VL TH H DH G+ L Q + + Sbjct: 22 NGKHILIDCGMEQGPDLYENQEIPVAVGEIDYVLLTHAHIDH-SGLIPLLAKRGFQGQIV 80 Query: 107 DVYAAPDCMKHLFE 120 +A D + + Sbjct: 81 TTFATADLCQIMLR 94 >gi|270296133|ref|ZP_06202333.1| ribonuclease Z [Bacteroides sp. D20] gi|270273537|gb|EFA19399.1| ribonuclease Z [Bacteroides sp. D20] Length = 304 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 90/303 (29%), Gaps = 95/303 (31%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + + ILGCG++L P R +S ++ + ++D G Sbjct: 2 EKFELHILGCGSAL----------------PTTRHFPTSQIVNV-----RDKLFMIDCGE 40 Query: 63 DFYMQVLRE--QVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHL 118 +Q + + ++ + +H H DH G+ GL L + + ++ +P ++ L Sbjct: 41 GAQLQFRKSHLKFSRLNHIFISHLHGDHCFGLLGLISTLNLLGRTAELHIH-SPKGLETL 99 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-- 176 F V + + + + + IP+ R+ GF Sbjct: 100 LTPMLDFFNRQMTYK----VLFHEFDTKEPMLIYEDRSLTVTTIPLRH---RMPCCGFLF 152 Query: 177 -------------------------RFGNVA-YCT------------------------- 185 R N A Y T Sbjct: 153 AEKRRPNHIIREMVDFYQVPVYELNRIKNGADYVTPEGKTVSNNLLTRPSAPSRSYAYCS 212 Query: 186 DVNAFPAESLEKLQNLDFLI-------IDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 D P +E+++ +D L DA + + H + +++ + K ++ Sbjct: 213 DTIYLP-SIVEQIKGVDLLFHEATFANEDAPRAKE-TFHTTAAQAAEIARKAEVKKLLIG 270 Query: 239 HMH 241 H Sbjct: 271 HFS 273 >gi|225568725|ref|ZP_03777750.1| hypothetical protein CLOHYLEM_04804 [Clostridium hylemonae DSM 15053] gi|225162224|gb|EEG74843.1| hypothetical protein CLOHYLEM_04804 [Clostridium hylemonae DSM 15053] Length = 555 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 18/84 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L++ + + + TH H DHI + Y Sbjct: 30 EDSIIVVDCGLAFPEDDMLGIDLVIPDVTYLKDNIQKVKGFVITHGHEDHIGAL----SY 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFESF 122 LK+ + +YA M + + F Sbjct: 86 VLKEMN-LPIYATKLTMGIIEKKF 108 >gi|194759071|ref|XP_001961773.1| GF15132 [Drosophila ananassae] gi|190615470|gb|EDV30994.1| GF15132 [Drosophila ananassae] Length = 292 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 27/182 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 N +++DTG + Q VL+++ SID +L TH H DH+ G+ + G Sbjct: 38 GNRRILIDTGDEDVPQYIEHLNDVLKQEKASIDTILLTHWHHDHVGGVKSILG------- 90 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN--NDVPICMKSAGGVIEAI 162 + F+Y + P I + I + ++ + A + Sbjct: 91 -------TALAHNDCRVFKY-GRTDAPDVCPEIPSHIKLHPLAHNQEFATEGAKVKVVHT 142 Query: 163 PILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 P + ++ G F + A + E +++L+ I+D + H ++ Sbjct: 143 PGHTTDHVVLAMSEGTLFSGDCILGEGTAVFEDLFEYMKSLEK-ILDIKPQRIFPGHGNV 201 Query: 221 SE 222 E Sbjct: 202 IE 203 >gi|46127163|ref|XP_388135.1| hypothetical protein FG07959.1 [Gibberella zeae PH-1] Length = 335 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + +++DTG + RE + ID L TH H DHI GI L Sbjct: 42 GRSRLLIDTGEGRKAWITSVRETLQRENAI-IDTALITHWHHDHIGGIKDLLS 93 >gi|330720832|gb|EGG99033.1| Metallo-beta-lactamase family protein2C RNA-specific [gamma proteobacterium IMCC2047] Length = 451 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 12/72 (16%) Query: 53 NTTVIVDTG-----PDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 NT ++VD G Q L + +DAVL TH H DH I L KQ Sbjct: 23 NTRILVDCGLYQGYKWLRRRNWQPLPFDIGKLDAVLLTHAHLDHSGYIPAL----FKQGF 78 Query: 105 PIDVYAAPDCMK 116 V+ Sbjct: 79 RGPVFTHHATKD 90 >gi|331703651|ref|YP_004400338.1| hypothetical protein MLC_6320 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802206|emb|CBW54360.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 610 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 81 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQKKIKALFITHGHEDHIGGIQ----- 135 Query: 99 FLKQKRPID-VYAAPDCMKHLFES 121 +L Q+ I +YA + + Sbjct: 136 YLVQQVKIPVIYAPKLAAMLIRDR 159 >gi|326384511|ref|ZP_08206191.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196856|gb|EGD54050.1| beta-lactamase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 616 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 17/124 (13%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + G + ++ D G + ++V I+AV+ TH H DHI + + Sbjct: 98 CGVLFPEDQQPGVDL-ILPDFG------YIEDRVDDIEAVVLTHGHEDHIGAV----PFL 146 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 LK + I + + + + K + R P +V + D + V Sbjct: 147 LKLRGDIPIVGSRFTLALVAA------KCREHRLRPKLVQVAEGDRQDYGVFDCEFFAVN 200 Query: 160 EAIP 163 +IP Sbjct: 201 HSIP 204 >gi|291521584|emb|CBK79877.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Coprococcus catus GD/7] Length = 271 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 74/256 (28%), Gaps = 49/256 (19%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G +L V R + + + +VD G Sbjct: 3 RLIMLGTGNAL-VTRCYNTC---------------------FAIQDDDEYFLVDAGGGNG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHG-IDGLRGYFLKQKR-----PIDVYAAPDCM 115 Q+ + I + TH H DH+ G I +R K +R + +Y + Sbjct: 41 IMRQLQDADISMAQIHHIFLTHEHTDHLLGMIWMIRMIATKMRREQYEGNLRIYCHSALV 100 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + R + + + D + + + G Sbjct: 101 ETVRTIANLTLPKKFTRLLDHRIQFVPLHEGDTKHILDY-----DVTFFDILSTKAKQYG 155 Query: 176 F--RFGNVAYCTDVNAFP--AESLEKLQNLDFLIIDAL-------KNGLHSSHFS-LSES 223 F R N T P + D+L+ +A + + H S + E+ Sbjct: 156 FTMRLKNGQKLTCAGDEPLNENCFGYAEGSDWLMHEAFCLYSQRDQYDPYEKHHSTVREA 215 Query: 224 LKKIELINPKNAILTH 239 + +N N IL H Sbjct: 216 CELAAYLNVPNLILYH 231 >gi|256383733|gb|ACU78303.1| RNA-metabolising metallo-beta-lactamase family [Mycoplasma mycoides subsp. capri str. GM12] gi|256384564|gb|ACU79133.1| RNA-metabolising metallo-beta-lactamase family [Mycoplasma mycoides subsp. capri str. GM12] gi|296455464|gb|ADH21699.1| RNA-metabolising metallo-beta-lactamase family [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 610 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 81 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQKKIKALFITHGHEDHIGGIQ----- 135 Query: 99 FLKQKRPID-VYAAPDCMKHLFES 121 +L Q+ I +YA + + Sbjct: 136 YLVQQVKIPVIYAPKLAAMLIRDR 159 >gi|225868332|ref|YP_002744280.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225701608|emb|CAW98864.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 21/133 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + V +H HAD I + L P+ V+ + ++ F + Sbjct: 57 ENKDKVQGVFLSHGHADAIGALPYLLAEV-----PVPVFGSELTIELAK-----LFVKAN 106 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + T D ++ G++ H SLG GN+ Y D Sbjct: 107 NST----KRFKNFHVVDSDTEIEFKDGLVSF--FKTTHSIPESLGVVIGTDKGNIVYTGD 160 Query: 187 VNAFPAESLEKLQ 199 F S E Q Sbjct: 161 FK-FDQASREGYQ 172 >gi|225870733|ref|YP_002746680.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225700137|emb|CAW94263.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 21/133 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + V +H HAD I + L P+ V+ + ++ F + Sbjct: 57 ENKDKVQGVFLSHGHADAIGALPYLLAEV-----PVPVFGSELTIELAK-----LFVKAN 106 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + T D ++ G++ H SLG GN+ Y D Sbjct: 107 NST----KRFKNFHVVDSDTEIEFKDGLVSF--FKTTHSIPESLGVVIGTDKGNIVYTGD 160 Query: 187 VNAFPAESLEKLQ 199 F S E Q Sbjct: 161 FK-FDQASREGYQ 172 >gi|195978335|ref|YP_002123579.1| metallo-beta-lactamase family protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975040|gb|ACG62566.1| metallo-beta-lactamase family protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 553 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 21/133 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + V +H HAD I + L P+ V+ + ++ F + Sbjct: 57 ENKDKVQGVFLSHGHADAIGALPYLLAEV-----PVPVFGSELTIELAK-----LFVKAN 106 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + T D ++ G++ H SLG GN+ Y D Sbjct: 107 NST----KRFKNFHVVDSDTEIEFKDGLVSF--FKTTHSIPESLGVVIGTDKGNIVYTGD 160 Query: 187 VNAFPAESLEKLQ 199 F S E Q Sbjct: 161 FK-FDQASREGYQ 172 >gi|15827796|ref|NP_302059.1| hypothetical protein ML1512 [Mycobacterium leprae TN] gi|13093348|emb|CAC30463.1| conserved hypothetical protein [Mycobacterium leprae] Length = 558 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 21/82 (25%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 + LK + I V + + Sbjct: 91 --PFLLKLRSDIPVVGSKFTLA 110 >gi|191638302|ref|YP_001987468.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei BL23] gi|227535211|ref|ZP_03965260.1| metallo-beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631613|ref|ZP_04674644.1| mRNA degradation ribonuclease J1/J2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066354|ref|YP_003788377.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei str. Zhang] gi|190712604|emb|CAQ66610.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei BL23] gi|227187095|gb|EEI67162.1| metallo-beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526078|gb|EEQ65079.1| mRNA degradation ribonuclease J1/J2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438761|gb|ADK18527.1| mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme [Lactobacillus casei str. Zhang] gi|327382329|gb|AEA53805.1| Beta-lactamase [Lactobacillus casei LC2W] gi|327385530|gb|AEA57004.1| Beta-lactamase [Lactobacillus casei BD-II] Length = 560 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I A++ TH H DHI GI YFL+Q Sbjct: 35 IVIDAGIKFPEDDLLGIDYVISDYSYLVQNKDKIKALVITHGHEDHIGGI----PYFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + Sbjct: 91 VPNVPIYAGPLAAALIR 107 >gi|91226602|ref|ZP_01261326.1| hypothetical protein V12G01_11598 [Vibrio alginolyticus 12G01] gi|91189076|gb|EAS75358.1| hypothetical protein V12G01_11598 [Vibrio alginolyticus 12G01] Length = 438 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 11/71 (15%) Query: 53 NTTVIVDTG----PDFYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 N +V++D G D Q + + + AV+ TH H DH+ + + L Sbjct: 23 NGSVLIDCGLLQGQDNAQQQSLNIDFSISDLKAVVLTHSHIDHVGRL----PWLLAAGYK 78 Query: 106 IDVYAAPDCMK 116 +Y + Sbjct: 79 GPIYCTEATAE 89 >gi|116494789|ref|YP_806523.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus casei ATCC 334] gi|116104939|gb|ABJ70081.1| RNase J1 [Lactobacillus casei ATCC 334] Length = 560 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I A++ TH H DHI GI YFL+Q Sbjct: 35 IVIDAGIKFPEDDLLGIDYVISDYSYLVQNKDKIKALVITHGHEDHIGGI----PYFLQQ 90 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + Sbjct: 91 VPNVPIYAGPLAAALIR 107 >gi|312872273|ref|ZP_07732343.1| ribonuclease Z [Lactobacillus iners LEAF 2062A-h1] gi|311092096|gb|EFQ50470.1| ribonuclease Z [Lactobacillus iners LEAF 2062A-h1] Length = 308 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 34/179 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG GA P R SS + + E + D G Sbjct: 1 MEIQFLGTGAGQ----------------PSKGRNVSSTALKLLDELNEI--WLFDVGEAT 42 Query: 65 YMQVLREQV--LSIDAVLYTHPHADHIHGIDGL---RGYFLKQKRPIDVYAAPDCMKHLF 119 Q+L + I + +H H DHI G+ GL R + + +Y + + Sbjct: 43 QHQILETNIKPRKITKIFISHNHGDHIFGLPGLLSSRSFQ-GDSGSLTIYGPAGIEQFVQ 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 S + + TYP + ++++++ + K H RI S GFR Sbjct: 102 ISLK---VSKTKITYP--IKYVILKDDGIIFEDK----QFAVFTAKLDH-RIESYGFRV 150 >gi|227495160|ref|ZP_03925476.1| possible metal-dependent hydrolase [Actinomyces coleocanis DSM 15436] gi|226831612|gb|EEH63995.1| possible metal-dependent hydrolase [Actinomyces coleocanis DSM 15436] Length = 566 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 36/147 (24%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++VD G F + + +++ + ++ TH H DHI + Y Sbjct: 40 NGQLLLVDCGVLFPQEKHPGVDLILPDFTAIEDRLDDVVGLILTHGHEDHIGAV----PY 95 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS---A 155 LK + I +Y + + P ++ I+N ++ + + Sbjct: 96 LLKLREDIPIYGCELTIAFVE----------------PKLDEHRIKNANLNVIAEGDRIT 139 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVA 182 G + + H ++ VA Sbjct: 140 LGGFDCEFVSVTHSIPDAMAIFIRTVA 166 >gi|307727886|ref|YP_003911099.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1003] gi|307588411|gb|ADN61808.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1003] Length = 490 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 18/81 (22%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGY 98 G+ +++D G + LR + ++DAV+ TH H DH Sbjct: 20 EGAGLRILIDCGLFQGTKNLR---LRNWNPFPVDIGTLDAVILTHAHLDHSG----YLPV 72 Query: 99 FLKQKRPIDVYAAPDCMKHLF 119 + VY Sbjct: 73 LARMGYRGPVYCTRGTRDLCQ 93 >gi|161529235|ref|YP_001583061.1| beta-lactamase domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160340536|gb|ABX13623.1| beta-lactamase domain protein [Nitrosopumilus maritimus SCM1] Length = 646 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 19/87 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTG--PDFYMQV--------LREQVLSIDAVLYTHPHADH 88 RSSL +S + +++D G P + L + +DAV+ H H DH Sbjct: 202 RSSLLLSTPESK-----ILIDCGINPGARSPMDAFPRLDSLNLTLDDLDAVVIGHAHLDH 256 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + L Y K +Y + Sbjct: 257 TGFLPTLCKYGYKG----PIYCTEPTL 279 >gi|300173538|ref|YP_003772704.1| ribonuclease J2 [Leuconostoc gasicomitatum LMG 18811] gi|299887917|emb|CBL91885.1| Ribonuclease J2 [Leuconostoc gasicomitatum LMG 18811] Length = 600 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 12/126 (9%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 I V TH HAD I + + Q+ ++ + ++ + + D Sbjct: 58 NSDKIAGVFLTHGHADAIGALP-----YFLQQVQAPIFGSELTIELAKLAIKDQQALKDY 112 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVA---YC 184 Y + I+ V + + I I + +G++ G F+F A Y Sbjct: 113 DDYHVVNEKTEIDFGQVTVSFFNTTHSIPESLGIVLATPYGQVVYTGDFKFDQTANSYYS 172 Query: 185 TDVNAF 190 TD+ Sbjct: 173 TDIARL 178 >gi|253574696|ref|ZP_04852036.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845742|gb|EES73750.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 569 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 48/185 (25%) Query: 35 NRRTRSS---LKISRVSERGSNTT-----------VIVDTG---PDFYM----------Q 67 NRR++ S ++I + G +++D G PD + Sbjct: 12 NRRSKPSPPPVRIFSLGGIGEIGKNMYGIEFRDEIILIDAGLKFPDSRLTGIDCIIPDIS 71 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 L E + + TH H DHI I Y L+Q + + +Y P + + Sbjct: 72 YLIENKHKMKGLFLTHGHEDHIGAI----PYVLRQLQ-LPIYGGPLTIGLVK-------A 119 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAY 183 L++ V ND + A + H + G G++ + Sbjct: 120 KLEEHRLLGQAELHVFHEND-----RYAFKHLAVHFFRTTHSIPDAFGIVVDTPYGSIVH 174 Query: 184 CTDVN 188 D Sbjct: 175 TGDFK 179 >gi|226947651|ref|YP_002802742.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|226843493|gb|ACO86159.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] Length = 287 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDSLISYLKQQHIKKLDYVIATHPHEDHIGGM 104 >gi|169630166|ref|YP_001703815.1| hypothetical protein MAB_3083c [Mycobacterium abscessus ATCC 19977] gi|169242133|emb|CAM63161.1| Conserved hypothetical protein [Mycobacterium abscessus] Length = 563 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 35/135 (25%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +I+D G PD + +++ ++A++ TH H DHI I + L Sbjct: 45 LIIDCGVLFPGHNEPGVDLILPDIRH--IEDRLEDVEALVLTHAHEDHIGAI----PFLL 98 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I V + + + + + + P I + +S G E Sbjct: 99 KMRPDIPVVGSAFTLALV-----------EAKCREHRITPRFIRVTE---GERSTHGPFE 144 Query: 161 AIPILQQHGRISSLG 175 H +L Sbjct: 145 CEYFAVNHSIPDALA 159 >gi|220921368|ref|YP_002496669.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] gi|219945974|gb|ACL56366.1| putative phytochrome sensor protein [Methylobacterium nodulans ORS 2060] Length = 607 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 78/271 (28%), Gaps = 55/271 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRT--RSSLKISRVSERGSNTTVIVDTGP 62 G SL VP P+ R +S T VI+D G Sbjct: 1 MQVRFFGTRGSLPVP------------GPRTIRYGGNTSC---VALRTARGTLVILDMGT 45 Query: 63 DFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLF 119 Y ++ E VL TH H DHI G+ +F D+YA L Sbjct: 46 GAYALGRELAAEGRPLRGHVLITHTHWDHIQGVPFFAPFFTPGNEW-DIYAPRGLGASLR 104 Query: 120 ES----FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 E+ +Y + + + + ++ + + H + +LG Sbjct: 105 ETLSGQMQYSYFPVALDQLGATIRYHELVEGELALGEDD---DVAVETHYLNHPAL-TLG 160 Query: 176 FRF----GNVAYCTDVNAF----------PAES----LEKLQNLDFLIIDA------LKN 211 +R + Y D F P + LQ D +I DA Sbjct: 161 YRLTADGATLVYALDHEPFCTASADGEKAPEGQDRRHADFLQGADLVIHDAQYTAAEYPA 220 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTHMHV 242 + H ++ + + L MH Sbjct: 221 KIGWGHSTVEYARRVALEAGAARLAL--MHH 249 >gi|164427068|ref|XP_959797.2| hypothetical protein NCU02376 [Neurospora crassa OR74A] gi|157071592|gb|EAA30561.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 300 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 10/70 (14%) Query: 52 SNTTVIVDTGPDFY------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 ++VD+G + L ++ I A + TH H DH GI L + K Sbjct: 47 GPQRLLVDSGAGERSWISALQRTLTDEKAHISAAIITHWHHDHTGGIRHLLDWNSK---- 102 Query: 106 IDVYAAPDCM 115 I VY Sbjct: 103 IKVYKNQPTY 112 >gi|89894388|ref|YP_517875.1| hypothetical protein DSY1642 [Desulfitobacterium hafniense Y51] gi|89333836|dbj|BAE83431.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 579 Score = 45.9 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 17/85 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHG 91 SS + V++D G + L+E ++AV+ TH H DH Sbjct: 24 SSYLVE-----SGGYRVLIDCGLFQGSKALKELNYGDFPYNPAELNAVILTHAHTDHSGL 78 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMK 116 I L Y + K +YA P+ +K Sbjct: 79 IPKLIKYGFQGK----IYATPETIK 99 >gi|326469495|gb|EGD93504.1| metallo-beta-lactamase [Trichophyton tonsurans CBS 112818] Length = 283 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 6/60 (10%) Query: 50 RGSNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +++DTG Q L + ++ L TH H DH+ G+ LR + Sbjct: 40 DRGAKRLLIDTGEGRPSWSVALQQTLTSERATVSHALLTHWHHDHVGGVRDLRRICPDVQ 99 >gi|283782216|ref|YP_003372971.1| beta-lactamase domain-containing protein [Pirellula staleyi DSM 6068] gi|283440669|gb|ADB19111.1| beta-lactamase domain protein [Pirellula staleyi DSM 6068] Length = 431 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 38/155 (24%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF-KALDDRTYP 135 DA+L +H H DH G + + + +Y K + + + K+LD + Sbjct: 76 DAILLSHAHLDH-------AGLLHRSRTEVPIYTTAGTSKMMLAAGVFAGQKSLDRNRFR 128 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN--- 188 P+ + G P+ H S+ + + Y D Sbjct: 129 PVTS-----------QQTYRIGDFSITPLSVDHSIFGSVAYLIEGDGKAILYTGDFRNHG 177 Query: 189 AFPAESLEKL-----QNLDFLIIDALKNGLHSSHF 218 P + L +++D LI++ +HF Sbjct: 178 RKPGMMRDLLAFVRGKSIDVLIVEG-------THF 205 >gi|48478196|ref|YP_023902.1| metal dependent hydrolase [Picrophilus torridus DSM 9790] gi|48430844|gb|AAT43709.1| metal dependent hydrolase [Picrophilus torridus DSM 9790] Length = 254 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 46/201 (22%) Query: 32 NPKNRRTRSSLKISRVSERGSNTTVIVDTGP------------------DFYMQVLREQV 73 N +N R R SL + + + ++++D G D ++ V Sbjct: 32 NDENNRIRISLNVPVLIDDDL--SIMIDAGMGSVFDDRFKKIFEPVKNYDLASSLIDLGV 89 Query: 74 LSIDAVLYTHPHADHIHGIDGLRGY----FLKQKRPIDVYA--APDCM-----KHLFESF 122 SID ++ +H H DH I + + + I+ Y + L + Sbjct: 90 NSIDYIILSHMHFDHSGHIFDDGPFKNSRIIVSREEINAYYHVNEFTRGSYIKRRLKKEI 149 Query: 123 RYC--FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Y F + I + G + P Sbjct: 150 IYNKRFNGIHIIKTGGHTAGHRIVWFQLNGEKYIYFGDLVPTPFHL-------------K 196 Query: 181 VAYCTDVNAFPAESLEKLQNL 201 AY V+ +P E+L+ ++L Sbjct: 197 PAYIPGVDCYPLETLKMKKDL 217 >gi|81428675|ref|YP_395675.1| metallo-beta-lactamase family hydrolase [Lactobacillus sakei subsp. sakei 23K] gi|78610317|emb|CAI55366.1| Putative hydrolase, metallo-beta-lactamase superfamily [Lactobacillus sakei subsp. sakei 23K] Length = 572 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 22/139 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + YFLK + V+ + + Sbjct: 55 LEENAERVAGIFLTHGHADAIGAL----PYFLK-GHDVPVFGSELTI---------ALAK 100 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + P + + + + + H SLG G + Y Sbjct: 101 ITVSSEPKLRHFNNFHVINANTAIDFEQATVSF--FKTTHTIPGSLGIVVKTDEGQIVYT 158 Query: 185 TDVNAFPAESLEKLQNLDF 203 D +S + D+ Sbjct: 159 GDFKF--DQSALPMYQTDY 175 >gi|291320713|ref|YP_003515978.1| hypothetical protein MAGa8250 [Mycoplasma agalactiae] gi|240247746|emb|CAX65749.1| Conserved hypothetical protein [Mycoplasma agalactiae] gi|290753049|emb|CBH41025.1| Conserved hypothetical protein [Mycoplasma agalactiae] Length = 614 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 27/136 (19%) Query: 56 VIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L+E+ +I+ + TH H DHI G+ Y +KQ Sbjct: 29 VIIDAGIKFADTATTGIKGIVPDYKYLKERKDNIEGLFITHGHEDHIGGV----VYLVKQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 +YA +++L F ++ V I IE + V + G ++ Sbjct: 85 VHLKRIYAPRIAIQYLKLKF-------EEHKITHKVEFIEIEKSAV---HEFGNGQVKVD 134 Query: 163 PILQQHGRISSLGFRF 178 QH + G R Sbjct: 135 FWTAQHSIPDAFGIRV 150 >gi|238062640|ref|ZP_04607349.1| beta-lactamase [Micromonospora sp. ATCC 39149] gi|237884451|gb|EEP73279.1| beta-lactamase [Micromonospora sp. ATCC 39149] Length = 209 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 50/165 (30%), Gaps = 29/165 (17%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DAVL TH H DH+ + + R P +Y L Sbjct: 37 DAVLITHEHPDHV----DVAALTRQLDRWPFRIYGPASLAGAL---------GDVAEALE 83 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAES 194 PI V + + I + +LG+ +V Y D P ++ Sbjct: 84 PISPGQAFTAAGVAVRAYGGRHAVIHPDIPV----VDNLGYLLNDVVYHPGDALVAPEDA 139 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +D L +H+ SE L I + P+ A H Sbjct: 140 P----------VDTLFAPIHAPWSKFSEVLDFIRAVAPRRAFALH 174 >gi|148377974|ref|YP_001256850.1| hypothetical protein MAG_7120 [Mycoplasma agalactiae PG2] gi|148292020|emb|CAL59412.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2] Length = 614 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 27/136 (19%) Query: 56 VIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 VI+D G F L+E+ +I+ + TH H DHI G+ Y +KQ Sbjct: 29 VIIDAGIKFADTATTGIKGIVPDYKYLKERKDNIEGLFITHGHEDHIGGV----VYLVKQ 84 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 +YA +++L F ++ V I IE + V + G ++ Sbjct: 85 VHLKRIYAPRIAIQYLKLKF-------EEHKITHKVEFIEIEKSAV---HEFGNGQVKVD 134 Query: 163 PILQQHGRISSLGFRF 178 QH + G R Sbjct: 135 FWTAQHSIPDAFGIRV 150 >gi|21224091|ref|NP_629870.1| hypothetical protein SCO5745 [Streptomyces coelicolor A3(2)] gi|256784830|ref|ZP_05523261.1| hypothetical protein SlivT_10098 [Streptomyces lividans TK24] gi|289768723|ref|ZP_06528101.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces lividans TK24] gi|3413828|emb|CAA20296.1| conserved hypothetical protein SC9A10.09 [Streptomyces coelicolor A3(2)] gi|289698922|gb|EFD66351.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces lividans TK24] Length = 561 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 23/149 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF------ 122 +R+++ I+ ++ TH H DHI G+ + L++K I + + + + Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALIEAKLQEHRIR 125 Query: 123 RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNV 181 Y + + V P E V + A A+ I G + G F+ + Sbjct: 126 PYTLEVAEGHR--ERVGPFDCEFVAVNHSIPDAL----AVAIRTPAGMVVHTGDFKMDQL 179 Query: 182 ---AYCTDVNAFPAESLEKLQNLDFLIID 207 TD++AF S E +D L+ D Sbjct: 180 PLDGRLTDLHAFARLSEE---GIDLLLAD 205 >gi|313884890|ref|ZP_07818642.1| hydroxyacylglutathione hydrolase [Eremococcus coleocola ACS-139-V-Col8] gi|312619581|gb|EFR31018.1| hydroxyacylglutathione hydrolase [Eremococcus coleocola ACS-139-V-Col8] Length = 238 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 +++Q + +DA+L TH H DH G+ + Q + VY + Sbjct: 38 IQDQNIRLDAILLTHNHDDHTGGVREILA----QIPDLPVYGPQETAD 81 >gi|317057212|ref|YP_004105679.1| beta-lactamase domain-containing protein [Ruminococcus albus 7] gi|315449481|gb|ADU23045.1| beta-lactamase domain-containing protein [Ruminococcus albus 7] Length = 261 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 37/181 (20%) Query: 51 GSNTTVIVDTGPDFY---MQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++VD G + + + + AVL TH H DHI G+ L +K Sbjct: 20 DEKSGILVDAGVSCKKICTALENAGIGTSAVKAVLVTHTHTDHISGLK-----VLTKKLK 74 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VY+ ++ L E + V+E G + Sbjct: 75 VPVYSVSGNLELLAEK-------------DKVCEGCVLEELGEG---TEDIGGFGVTAFM 118 Query: 166 QQHGRISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLH 214 H S GFR + A CTD+ + E+L +++++ LK G + Sbjct: 119 TPHDTPVSCGFRITVPGGADCAVCTDLGIVTDDIHEQLIKCRLVLLESNYDPRMLKYGPY 178 Query: 215 S 215 Sbjct: 179 P 179 >gi|302872358|ref|YP_003840994.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor obsidiansis OB47] gi|302575217|gb|ADL43008.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor obsidiansis OB47] Length = 752 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 45/211 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADHIH 90 S I+ ++++DTGP++ +L+ V +D ++ TH H DHI Sbjct: 521 SSLITYKG-----FSMLIDTGPEYEDFSSLKRVVLPYILKRGVSKLDVLVLTHKHRDHIG 575 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 D L + + + + + F+ V+ + + Sbjct: 576 DFDYLLDEMEVDR----IVTSKEVYLENAQKFK---------------GQKVVLVDSFKV 616 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQ--NLDFLII 206 P+ Q + FGN + + D + +E ++ NL I Sbjct: 617 YRYKNLKAYFIPPVEQDENSSVVVKLTFGNFSMLFTGDASY--ESEMEYMKRFNLQATI- 673 Query: 207 DALKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S + S + +E + PK A++ Sbjct: 674 --LKVGHHGS--STATSEEFLESVKPKVAVI 700 >gi|228928164|ref|ZP_04091208.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831581|gb|EEM77174.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 285 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 19/142 (13%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V SN V+VD G P +++ R A++ TH H DH+ GI L Sbjct: 41 ICFVGNPESNDFVLVDAGMPKCANEIISVAKDRFGTNSRPKAIILTHGHFDHVGGIIELI 100 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y+ + VYA + L Y D IV + + PI + G Sbjct: 101 KYW-----DVPVYAHQMEIPFLTGQQSY--PKPDPTVEGGIVAKMSPLFPNEPIDL---G 150 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 I+ +P + GFR+ Sbjct: 151 NSIKVLPTDGTVPHMP--GFRW 170 >gi|289937583|ref|YP_003482185.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] gi|289533274|gb|ADD07623.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 386 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 18/147 (12%) Query: 50 RGSNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 S T+++D+G D+ + E V ID ++ TH HADHI G D + ++ + Sbjct: 110 DPSGETMLIDSG-DWRQGGTDVIDYLEDEDVDRIDHLVATHAHADHIGGHDAIIEHYETE 168 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I A + H +++ A++D V +V+E+ D I A + Sbjct: 169 RDGIGA-AYDSGVAHTSQTYERYLDAIEDHD----VELLVVEDGDH-IEFGDATIDVRNP 222 Query: 163 PI----LQQHGRISSLGFRFGNVAYCT 185 P H +L FG +Y T Sbjct: 223 PAGDSESDLHYNSVALAIEFGEFSYLT 249 >gi|183981977|ref|YP_001850268.1| hydrolase [Mycobacterium marinum M] gi|183175303|gb|ACC40413.1| conserved hypothetical hydrolase [Mycobacterium marinum M] Length = 558 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 21/82 (25%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 + L+ + I + + + Sbjct: 91 --PFLLRLRPDIPIVGSKFTLA 110 >gi|156933288|ref|YP_001437204.1| hypothetical protein ESA_01100 [Cronobacter sakazakii ATCC BAA-894] gi|156531542|gb|ABU76368.1| hypothetical protein ESA_01100 [Cronobacter sakazakii ATCC BAA-894] Length = 319 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 21/141 (14%) Query: 44 ISRVSERGSNTTVIVDTGP---------DFYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 I+ + ++VD+G + + ID VL TH HADH G+ Sbjct: 86 INAYVINTGDKLILVDSGAGALLGNNGGHLPENLRAAGIDPSQIDMVLLTHVHADHSGGV 145 Query: 93 D-GLRGYFLK-----QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 + F +R +D + P K + S R+ F + R+ P+++ ++ Sbjct: 146 QRDGKPVFPNATVRVDQRDLDFWLNPAHEKEVEASQRHTFAESE-RSLRPVISAGKMKAF 204 Query: 147 DVPICMKSAGGVIEAIPILQQ 167 P + IEA+P Sbjct: 205 HAPAQIMP---DIEALPAPGH 222 >gi|254374622|ref|ZP_04990103.1| hypothetical protein FTDG_00796 [Francisella novicida GA99-3548] gi|151572341|gb|EDN37995.1| hypothetical protein FTDG_00796 [Francisella novicida GA99-3548] Length = 320 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++DTG ++ ++++ TH HADH I + YF K+ + Sbjct: 61 GKSKILIDTGGGTYLRFGQSGARLEDLESINMTHFHADHSADIPAILKGAYFSKRTENLP 120 Query: 108 VYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPICM 152 +F Y L +P ++P++ I+ + Sbjct: 121 FSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVINIDYTKLEPTK 180 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L ++ G + + + F ++ +N D Sbjct: 181 VFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 240 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 241 LMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|86742224|ref|YP_482624.1| beta-lactamase-like protein [Frankia sp. CcI3] gi|86569086|gb|ABD12895.1| beta-lactamase-like [Frankia sp. CcI3] Length = 561 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+AV+ TH H DHI + Y L+++R I + + + Sbjct: 65 PDF--TAIRDRLDDIEAVILTHAHEDHIGAV----PYLLRERRDIPLIGTRLTLALMN-- 116 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L + + I E A G E H Sbjct: 117 -----AKLAEHRVKAVTQEIREEERH-------AFGPFECEFFAVNHS 152 >gi|328906963|gb|EGG26729.1| putative Zn-dependent hydrolase [Propionibacterium sp. P08] Length = 231 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 47/208 (22%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + + +R V+VD P Q + +DA+L TH H DH+ Sbjct: 25 SCILVEAAGQR-----VLVD--PGNLSQSW-HGLTDLDAILVTHRHPDHV---------- 66 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP--PIVNPIVIENNDVPICMKSAGG 157 P+ + L ++ ++ P ++ VI DV G Sbjct: 67 -----------DPEHIGALVDANSGAVVRAEEGACREIPALDADVIAPGDV-----LQIG 110 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALKN 211 + + H I GNV Y + P + L++ + +D L A Sbjct: 111 EVRIEAVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA--- 167 Query: 212 GLHSSHFSLSESLKKIELINPKNAILTH 239 H+ +++E++ + ++ L H Sbjct: 168 --HAPWAAMNETVDFARSVGARHGFLIH 193 >gi|170016929|ref|YP_001727848.1| metallo-beta-lactamase superfamily hydrolase [Leuconostoc citreum KM20] gi|169803786|gb|ACA82404.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Leuconostoc citreum KM20] Length = 605 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 22/131 (16%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L + I V TH HAD I + + Q+ ++ + ++ + Sbjct: 50 PDF--DYLIKNNDKIAGVFLTHGHADAIGALP-----YFLQQVQAPIFGSELTIELAKLA 102 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR---- 177 + D Y + V + G + H S+G Sbjct: 103 IKEQEALKDYDDY-----------HVVNAKTEIDFGTVTVSFFNTTHSIPDSMGIVLGTP 151 Query: 178 FGNVAYCTDVN 188 FG + Y D Sbjct: 152 FGQIVYTGDFK 162 >gi|163790256|ref|ZP_02184689.1| hypothetical protein CAT7_05029 [Carnobacterium sp. AT7] gi|159874531|gb|EDP68602.1| hypothetical protein CAT7_05029 [Carnobacterium sp. AT7] Length = 234 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 63/219 (28%), Gaps = 54/219 (24%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + V+++ G + Q + + + +H H DH I + ID Sbjct: 19 DDGISQVLIECGIKLELVKQKMMFDFRRVAGMCISHEHGDHSKEIKKVL-----NTTSID 73 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 ++A+ + L + P + I G Sbjct: 74 IFASKGTLNAL--------------SVP------NHRATVLEIGKSVQIGSWAVTSFDVN 113 Query: 168 HGRISSLGFRFGN-----VAYCTDV-------NAFPAESLEKLQNLDFL--------IID 207 H GF F N + + TD +E +LD + + Sbjct: 114 HDAAEPTGFLFKNQLGEQLLFVTDTYYVKYKFKGITHMMIEANYSLDIIRKKVEENEVAQ 173 Query: 208 ALKNGLHSSHFSLSESLKKIE-----LINPKNAILTHMH 241 LKN + +SHF S + I+ + L H+ Sbjct: 174 YLKNRILTSHFEFENSKEFIKVNTSNQLQ--EVWLLHLS 210 >gi|50122264|ref|YP_051431.1| hydroxyacylglutathione hydrolase [Pectobacterium atrosepticum SCRI1043] gi|81644255|sp|Q6D1V5|GLO2_ERWCT RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|49612790|emb|CAG76240.1| probable hydroxyacylglutathione hydrolase [Pectobacterium atrosepticum SCRI1043] Length = 251 Score = 45.9 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +N VIVD G + L + L +A+L TH H DH+ G+ + L + V+ Sbjct: 21 ANRCVIVDPGEASPVLNALDQNALLPEAILLTHHHNDHVGGVSEI----LNHYPNLPVFG 76 Query: 111 APDCMK 116 + K Sbjct: 77 PKETAK 82 >gi|313829581|gb|EFS67295.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|315109047|gb|EFT81023.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] Length = 557 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 32 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 87 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 88 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHS 147 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 148 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 198 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 199 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 >gi|323529290|ref|YP_004231442.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1001] gi|323386292|gb|ADX58382.1| RNA-metabolising metallo-beta-lactamase [Burkholderia sp. CCGE1001] Length = 482 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 G+ +++D G + ++ L V ++DAV+ TH H DH + Sbjct: 20 EGARLRILIDCGLFQGTKNLRLRNWNPLPIDVRTLDAVILTHAHLDHSG----YLPVLAR 75 Query: 102 QKRPIDVYAAPDCMK 116 VY Sbjct: 76 MGYRGPVYCTRGTRD 90 >gi|224093392|ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa] Length = 537 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 49/180 (27%), Gaps = 41/180 (22%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH GI +YA + +++ L+ + I Sbjct: 27 FLTHAHKDHTSGI--------LTHSCYPIYATHLTKLLVLQNYP----QLEGSLFVGI-- 72 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGNVAYCTDV-------- 187 + G + H + + F FGN+ + D Sbjct: 73 -----EVGESVVFNDPDGEFKVTAFDANHCPGAVM-FLFEGNFGNILHTGDCRLTPEGVR 126 Query: 188 ----NAFPAESLEKLQNLDFLIIDA----LKNGLHSSHFSLSESLKKIEL-INPKNAILT 238 + E LD++ +D L S H ++ + L I LT Sbjct: 127 CLPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLNCIWKHPAATVVYLT 186 >gi|50842946|ref|YP_056173.1| metal dependent hydrolase [Propionibacterium acnes KPA171202] gi|50840548|gb|AAT83215.1| metal dependent hydrolase [Propionibacterium acnes KPA171202] gi|313763620|gb|EFS34984.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313794015|gb|EFS42039.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313801401|gb|EFS42652.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313807919|gb|EFS46400.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] gi|313813578|gb|EFS51292.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313816800|gb|EFS54514.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313819704|gb|EFS57418.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313822189|gb|EFS59903.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823576|gb|EFS61290.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825901|gb|EFS63615.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313839877|gb|EFS77591.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314914624|gb|EFS78455.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314919263|gb|EFS83094.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314920826|gb|EFS84657.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314924583|gb|EFS88414.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] gi|314930505|gb|EFS94336.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314954337|gb|EFS98743.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314957385|gb|EFT01488.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314962052|gb|EFT06153.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963631|gb|EFT07731.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314968537|gb|EFT12635.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] gi|314978853|gb|EFT22947.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314986488|gb|EFT30580.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990847|gb|EFT34938.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315079485|gb|EFT51478.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315083486|gb|EFT55462.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315087172|gb|EFT59148.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315089342|gb|EFT61318.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315099248|gb|EFT71224.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315100518|gb|EFT72494.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315106711|gb|EFT78687.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|327329762|gb|EGE71518.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA3] gi|327334280|gb|EGE75994.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL097PA1] gi|327446448|gb|EGE93102.1| hypothetical protein HMPREF9568_01030 [Propionibacterium acnes HL013PA2] gi|327451964|gb|EGE98618.1| hypothetical protein HMPREF9584_02170 [Propionibacterium acnes HL092PA1] gi|327454999|gb|EGF01654.1| hypothetical protein HMPREF9581_01187 [Propionibacterium acnes HL087PA3] gi|327457712|gb|EGF04367.1| hypothetical protein HMPREF9586_00288 [Propionibacterium acnes HL083PA2] gi|328752203|gb|EGF65819.1| hypothetical protein HMPREF9563_02472 [Propionibacterium acnes HL020PA1] gi|328755167|gb|EGF68783.1| hypothetical protein HMPREF9579_01194 [Propionibacterium acnes HL087PA1] gi|328758054|gb|EGF71670.1| hypothetical protein HMPREF9588_00993 [Propionibacterium acnes HL025PA2] Length = 557 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 79/223 (35%), Gaps = 46/223 (20%) Query: 52 SNTTVIVDTGPDFYMQ------VLREQVLSID--------AVLYTHPHADHIHGIDGLRG 97 + +++D G F +L + +D A++ TH H DHI + Sbjct: 32 NGEMLVIDCGVLFPEDDHPGVDLLLPGLDYLDEEKLAKVKALVLTHGHEDHIGAV----P 87 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESF------RYCFKALDDRTYPPIVNPIVIENNDVPIC 151 Y LK++ I +Y + + + Y + + + +E V Sbjct: 88 YLLKRRPDIPIYGSKLTLALVEAKLREHRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHS 147 Query: 152 MKSAGGVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAFPAESLEKL--QNLDFLI 205 + A A+ + G + + G F+ + TD+ AF +L + +D + Sbjct: 148 IPDAL----AVCVRTDAGTLINTGDFKMDQLPLDGRITDLRAF-----ARLGEEGVDLFM 198 Query: 206 IDALKNGLHSSHFSLSESLKKIELI--NPKNAILT-----HMH 241 +D+ + S +E IE + K ++ H+H Sbjct: 199 VDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVACFASHVH 241 >gi|302526016|ref|ZP_07278358.1| predicted protein [Streptomyces sp. AA4] gi|302434911|gb|EFL06727.1| predicted protein [Streptomyces sp. AA4] Length = 322 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 31/194 (15%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGID-----GLRGYFLKQKR 104 +VD G + + + + AV TH H+DH+ + G Sbjct: 57 GGRVYLVDAGYGTLGKYVSAGLSLRDLAAVFVTHLHSDHVAELFTLFLLGWGPANQGVVD 116 Query: 105 PIDVY--------------AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 P+ VY + +F + P + +I DV + Sbjct: 117 PVRVYGPGPDPTDPGPPAAGTAGLIAGNLAAFGQDVAVRQRTSDRPRLAG-LIHAADVSV 175 Query: 151 CMKSAGGV---IEAIPILQQHGRIS-SLGFRF----GNVAYCTDVNAFPAESLEKLQNLD 202 ++ + H + +LG+RF G VA+ D E D Sbjct: 176 AGETVVHEDDRVRVTARAVPHPPLHLALGYRFETEHGVVAFSGDTAR-SDAVGELAAGAD 234 Query: 203 FLIIDALKNGLHSS 216 L+ +A++ + S Sbjct: 235 LLVHEAMEPDFYRS 248 >gi|124027362|ref|YP_001012682.1| putative exoribonuclease [Hyperthermus butylicus DSM 5456] gi|123978056|gb|ABM80337.1| putative exoribonuclease [Hyperthermus butylicus DSM 5456] Length = 427 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 81/250 (32%), Gaps = 34/250 (13%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGID 93 R S+ + E +++D G +F + + A++ +H H DHI Sbjct: 17 RLSVLVRVRPEERDG--ILLDAGVNFDEEDRPVFAATYPPKYVKAMILSHAHLDHIG--- 71 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD-DRTYPPIVNPIVIENND-VPIC 151 + RP VYA ++ K Y +++E + + Sbjct: 72 -TAPMYFISGRP-RVYATKPTLEMAKLMLEDFLKLNGYYSPYEHYEVKLLLEAGEKIHYG 129 Query: 152 MKSAGGVIEAIPILQQH---GRISSLGFRFGNVAYCTDVNAFPAESLEK-----LQNLDF 203 + +EA H + L + + D+N + ++ + +LD Sbjct: 130 QRIDIDGVEATFYSAGHVPGSTFTVLDIDGTRMGFTGDINTIETKLMKPANHHIIGSLDI 189 Query: 204 LIIDALKNGL-HSSHFSLSESL-----KKIELINPKNAILT-HMHVDLDYDMVL--KSTP 254 L+ +A H + + L + I+ K +L + ++++ Sbjct: 190 LVTEATYGSSLHPPRANAEKRLLSIIEETIDR---KGTVLIPAFSIARGQEIMMILAEHD 246 Query: 255 SRVVPAFDGM 264 V DGM Sbjct: 247 PGVPVYVDGM 256 >gi|304413389|ref|ZP_07394862.1| putative hydroxyacylglutathione hydrolase [Candidatus Regiella insecticola LSR1] gi|304284232|gb|EFL92625.1| putative hydroxyacylglutathione hydrolase [Candidatus Regiella insecticola LSR1] Length = 258 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + +IVD G + +L ++ L +DA+L TH H DH+ G+ L LK I V Sbjct: 26 DEQDHCIIVDPGEASPVLAILNKRHLIVDAILLTHHHQDHLDGVPEL----LKHFPQIPV 81 Query: 109 YAAPDCMK 116 Y + K Sbjct: 82 YGPRETEK 89 >gi|302551355|ref|ZP_07303697.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] gi|302468973|gb|EFL32066.1| integral membrane protein [Streptomyces viridochromogenes DSM 40736] Length = 406 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G V+VD GPD LR + + V+ TH HADH+ G+ Sbjct: 158 GEGAGVVVDAGPDPHLVDHCLRALGITRVPLVVLTHFHADHVAGL 202 >gi|299534591|ref|ZP_07047923.1| hypothetical protein BFZC1_01142 [Lysinibacillus fusiformis ZC1] gi|298729964|gb|EFI70507.1| hypothetical protein BFZC1_01142 [Lysinibacillus fusiformis ZC1] Length = 555 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L V I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDDLLGIDYVIPDYTYLVRNVDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ I I+ DV K++ Sbjct: 89 QVNIPVYGGKLALGLLRNK-------LEEHGLLRTTKLIEIKEEDVIKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H + G GN+ + D Sbjct: 137 FFRTTHSIPDAYGIVVKTPPGNIVHTGDFK 166 >gi|255084337|ref|XP_002508743.1| predicted protein [Micromonas sp. RCC299] gi|226524020|gb|ACO70001.1| predicted protein [Micromonas sp. RCC299] Length = 850 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 24/106 (22%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G P R S++ I R + V++D G Sbjct: 460 ELLFLGTG----------------SAEPSRYRGSSAILIKRAARSTDEGNVLLDAGEGCA 503 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + R + + + +H H DH+ G+ G+ Q+ Sbjct: 504 GAMKRYLGHDEARRAIRDLKVLWVSHQHPDHMLGVRGVLALRRPQQ 549 >gi|188589684|ref|YP_001921619.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|251780388|ref|ZP_04823308.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188499965|gb|ACD53101.1| metallo-beta-lactamase family protein [Clostridium botulinum E3 str. Alaska E43] gi|243084703|gb|EES50593.1| metallo-beta-lactamase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 315 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 50 RGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 R ++ +++D GP Q+ + + + V+ THPH DHI G+ Sbjct: 81 RVNDFDILIDAGPRSEADQLLKQLEEKNIDDFEMVIATHPHEDHIGGM 128 >gi|284037557|ref|YP_003387487.1| beta-lactamase [Spirosoma linguale DSM 74] gi|283816850|gb|ADB38688.1| beta-lactamase domain protein [Spirosoma linguale DSM 74] Length = 320 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 33/178 (18%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + TILG G++ P + +++ ++ S+ V++D G Sbjct: 20 FSLTILGAGSAT----------------PTLKLHQTAQLLTIGSD-----YVLIDCGEGT 58 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKR--PIDVYAAPDCMKHLFE 120 ++++ +++ + + +H H DH G+ L R + ++ + L Sbjct: 59 QLRLIEQRIRPGRLRYIFISHLHGDHYFGLPPLLSSLNLGGRTEDLFLFGPRGLDEVLTT 118 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 FR + D ++ V+E + + + +E+IP+ RI G+ F Sbjct: 119 IFR-----VSDSRLGFRLHFQVVEPDSPSLLLDHPLMTVESIPLQH---RIDCSGYLF 168 >gi|156551217|ref|XP_001601407.1| PREDICTED: similar to cleavage and polyadenylation specificity factor [Nasonia vitripennis] Length = 738 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 64/182 (35%), Gaps = 32/182 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G PDF ++ R V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDEKFDPDFIKELKRH-VHQIDAVLLSYPDPLHLGALPYLVGKC---GLS 81 Query: 106 IDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F + IV + I MK Sbjct: 82 CPIYATIPVYK-MGQMFMYDIYQSRHNMEDFNLFTLDDVDAAFDKIVQLKYNQSISMKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLI 205 G + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 141 GYGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLI 199 Query: 206 ID 207 D Sbjct: 200 TD 201 >gi|330999849|ref|ZP_08323553.1| metallo-beta-lactamase domain protein [Parasutterella excrementihominis YIT 11859] gi|329573620|gb|EGG55213.1| metallo-beta-lactamase domain protein [Parasutterella excrementihominis YIT 11859] Length = 269 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 15/76 (19%) Query: 40 SSLKISRVSERGSNTTVIVDTGPD---FYMQV--LREQVLSIDAVLYTHPHADHIHGIDG 94 SL + V++DTG + L+ + + A++ +H H DHI G+ Sbjct: 23 CSLL------ETEHGNVMIDTGGTGHVLRHNLDFLKIDLKKVRALVLSHSHHDHISGLLD 76 Query: 95 LRGYFLKQKRPIDVYA 110 + I +YA Sbjct: 77 IVFSCPG----IPIYA 88 >gi|323704593|ref|ZP_08116171.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323536055|gb|EGB25828.1| beta-lactamase domain-containing protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 272 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Query: 52 SNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + +V+VDTG ++ + ++ V+ TH H DH+ G+ L L++ + + Sbjct: 29 EDKSVLVDTGQSGNFIINSGLMGINLKDVNKVILTHGHYDHVGGLKNL----LEENKDVR 84 Query: 108 VYAAPDCMKH 117 +YA + Sbjct: 85 IYANHKILNR 94 >gi|300690921|ref|YP_003751916.1| ribonuclease Z [Ralstonia solanacearum PSI07] gi|299077981|emb|CBJ50622.1| Ribonuclease Z [Ralstonia solanacearum PSI07] Length = 338 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++ D G +L Q+L + V TH H DH G D L L +K Sbjct: 20 YLGFHDERRALLFDLGDLSR--LLPGQLLRLSHVFVTHTHMDHFAGFDRLLRVSLGRKDR 77 Query: 106 I 106 I Sbjct: 78 I 78 >gi|299146157|ref|ZP_07039225.1| putative metallo-beta-lactamase domain protein [Bacteroides sp. 3_1_23] gi|298516648|gb|EFI40529.1| putative metallo-beta-lactamase domain protein [Bacteroides sp. 3_1_23] Length = 195 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 49 ERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 E SN IVD G + R + + AVL TH H DHI+G+ + Sbjct: 20 EEWSNDAFIVDCGDVQPIKEYLQRHNL-KLAAVLLTHSHFDHIYGLPEIA 68 >gi|294632191|ref|ZP_06710751.1| metallo-beta-lactamase [Streptomyces sp. e14] gi|292835524|gb|EFF93873.1| metallo-beta-lactamase [Streptomyces sp. e14] Length = 554 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I A++ TH H DHI G+ Y L+++ I V + + L + Sbjct: 63 IRDRLDDIVAMVLTHGHEDHIGGV----PYLLRERSDIPVVGSRLTLAFLEAKLK----- 113 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF----RFGNVAYC 184 + P + + + G + + H SL R G V + Sbjct: 114 ------EHGIRPRTVRVREGD---RRGFGPFDCEFVAVNHSIPDSLAVAIRTRAGMVLHT 164 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 165 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 224 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 225 APRRVIVSSFASHVH 239 >gi|308804900|ref|XP_003079762.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] gi|116058219|emb|CAL53408.1| Predicted metal-dependent hydrolase (beta-lactamase superfamily) (ISS) [Ostreococcus tauri] Length = 412 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 60/266 (22%) Query: 57 IVDTGPD--------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++D G F +V+ V S+ V +H HADH+ G+ G+ Q + Sbjct: 1 MLDCGEGTVGSIARMFGREVMMSIVQSLKMVWISHHHADHMLGVRGVLD-VHSQTCEAPL 59 Query: 109 YAAPDC---------------MKHLFES--FRYCFKALD-------------------DR 132 + + F F L + Sbjct: 60 TLVGPTILREWLEICGVSKSSYRFIRSRDLFAGPFGRLPPPPPPPMQPKSQPRSVVNAHQ 119 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDV 187 + P N + + + G+ + +H R + G+ +AY D Sbjct: 120 SMPSGPNSNRGSLSSIETTLIQLTGLSRIEAVPVEHCR-DAAALIIGSPSNWSLAYSGDC 178 Query: 188 NAFPAESLEKL-QNLDFLIIDALKNGLHSSHF------SLSESLKKIELINPKNAILTHM 240 P+ + + + D +I +A +H + SE+L+ K+ +LTH Sbjct: 179 R--PSRAFARAARGCDVMIHEATFENELYNHAVRKRHSTTSEALETAADAQVKHIVLTHF 236 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQF 266 + L S + AFDG + Sbjct: 237 SQRYPKAISLDSLSIEPIIAFDGFRV 262 >gi|209517194|ref|ZP_03266039.1| hydroxyacylglutathione hydrolase [Burkholderia sp. H160] gi|209502330|gb|EEA02341.1| hydroxyacylglutathione hydrolase [Burkholderia sp. H160] Length = 263 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 51 GSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + V+VD G ++ L ++ + A+L TH H DH+ G+ L + + VY Sbjct: 22 DGHHAVVVDPGAAAPVRACLAQRGWRLSAILLTHHHQDHVGGVADLL-----NGQDVPVY 76 Query: 110 AAP-DCMKHLFES 121 + + HL Sbjct: 77 GPAGEAIAHLTRR 89 >gi|124026825|ref|YP_001015940.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus marinus str. NATL1A] gi|123961893|gb|ABM76676.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Prochlorococcus marinus str. NATL1A] Length = 649 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 LRE I ++ TH H DHI GI L+ + + PI VY P M L Sbjct: 72 LRENQNRIRGLVVTHGHEDHIGGISHHLKNFNI----PI-VYGPPLAMSMLRGKM 121 >gi|15807737|ref|NP_285392.1| cleavage and polyadenylation specificity factor-like protein [Deinococcus radiodurans R1] gi|6460540|gb|AAF12246.1|AE001862_72 cleavage and polyadenylation specificity factor-related protein [Deinococcus radiodurans R1] Length = 499 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGP----DFYMQVLREQVL----SIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++VD G D + RE S+DAVL TH H DH+ + ++ Sbjct: 35 GGRHLLVDCGLFQGGDELERRNRESFPFEPASLDAVLLTHAHLDHVGRL----PLLVRLG 90 Query: 104 RPIDVYAAPDCMK 116 VY P Sbjct: 91 YRGPVYCTPPTAA 103 >gi|309807237|ref|ZP_07701209.1| ribonuclease J 1 [Lactobacillus iners LactinV 03V1-b] gi|309807905|ref|ZP_07701835.1| ribonuclease J 1 [Lactobacillus iners LactinV 01V1-a] gi|308166375|gb|EFO68582.1| ribonuclease J 1 [Lactobacillus iners LactinV 03V1-b] gi|308168854|gb|EFO70942.1| ribonuclease J 1 [Lactobacillus iners LactinV 01V1-a] Length = 537 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 29/133 (21%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI + LK+ Sbjct: 11 IIMDCGIKFPEDGEMGINYIISDYSYLIKNREKIKALVVTHGHEDHIGGI----PFLLKK 66 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I VYA P + + LD+ I+ V+ ++ + + Sbjct: 67 IPEIPVYATPFALALIR-------GKLDEHG---ILKNSVLHEEYEDTVLQFSKLSVTF- 115 Query: 163 PILQQHGRISSLG 175 H +LG Sbjct: 116 -FRTTHSIPDTLG 127 >gi|255513556|gb|EET89822.1| beta-lactamase domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 419 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 21/171 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +T +++D G D + ++ E++ +IDAV +H H DH + + Sbjct: 3 ESGSTRILLDAGVKLGSEDQFPKITDEELGNIDAVFISHAHLDHCG----YVPHIYSAEY 58 Query: 105 PIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 +VYA ++ + Y + ++ ++ V + + ++ Sbjct: 59 RGEVYATKPTLELMQVLISDYMRISEPSNVSKKGLSEMLKHQRAVEYKREISIKDLKITF 118 Query: 164 ILQQHGRISSLGFRFGN----VAYCTD-----VNAFPAESLEKLQNLDFLI 205 I H + S R + + Y D L+ L D LI Sbjct: 119 IPAGH-ILGSALIRVTDGKNTLIYTGDINLAKTKLLNGADLKNLSG-DVLI 167 >gi|229553940|sp|A8XUS3|CPSF2_CAEBR RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=CPSF 100 kDa subunit gi|309356873|emb|CAP36398.2| CBR-CPSF-2 protein [Caenorhabditis briggsae AF16] Length = 842 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 61/194 (31%), Gaps = 34/194 (17%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G D ++ LR + I AVL +HP H+ G+ L Sbjct: 26 DNDYILLDCGWDERFELKYFEELRPYIPKISAVLISHPDPLHLGGLPYLVAKCGLTA--- 82 Query: 107 DVYAAPDCMKHLFESFRY--CFKALDDRTYP---------PIVNPIVIENNDVPICMKSA 155 VY K + + F Y + LD + ++ N + + Sbjct: 83 PVYCTVPVYK-MGQMFIYDLVYSHLDVEEFQHYSLDDVDMAFEKVEQVKYNQTVVLKGDS 141 Query: 156 GGVIEAIPILQQHGR--ISSLGFRFGNVAYCTDVN-----AFPAESLEKLQNLDFLIIDA 208 G A+P G ++ YC D N S + LI A Sbjct: 142 GVNFTAMPAGHMIGGSMWRICRITGEDIIYCVDFNHRKDRHLSGCSFDNFNRPHLLITGA 201 Query: 209 LKNGLHSSHFSLSE 222 H H SL + Sbjct: 202 -----H--HISLPQ 208 >gi|170695451|ref|ZP_02886596.1| hydroxyacylglutathione hydrolase [Burkholderia graminis C4D1M] gi|170139642|gb|EDT07825.1| hydroxyacylglutathione hydrolase [Burkholderia graminis C4D1M] Length = 263 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + V+VD G ++ L ++ + A+L TH H DH+ G+ L + + V Sbjct: 21 SDGHHAVVVDPGEAAPVRAYLAKRGWRLSAILLTHHHQDHVGGVADLL-----NGQDVPV 75 Query: 109 YAAP-DCMKHLFES 121 Y + ++ + + Sbjct: 76 YGPAGEAIERVTQR 89 >gi|16801334|ref|NP_471602.1| hypothetical protein lin2270 [Listeria innocua Clip11262] gi|16414782|emb|CAC97498.1| lin2270 [Listeria innocua Clip11262] Length = 205 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 11/109 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R + I VY +P ++ + S + I Sbjct: 50 AVLLTHCHYDHIGALEEIRSTY-----QIPVYVSP--LEQEWLSNPDLNLSAHIAGKAII 102 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P E ++ + P H I S+ F F + A D Sbjct: 103 AQPAEYEFTLGDYNIEGFRFKVVPTP---GHS-IGSVSFIFDDFAVVGD 147 >gi|326387445|ref|ZP_08209054.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208101|gb|EGD58909.1| beta-lactamase-like protein [Novosphingobium nitrogenifigens DSM 19370] Length = 550 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 30/131 (22%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F + + E+ + ++ TH H DHI + Sbjct: 28 EGKWLMVDLGMTFADPWYPGVELVFADLEFIEERSDDLLGIVLTHAHEDHIGAVP----- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + Q+ + +YA P + + E +A DR V VIENN + + G Sbjct: 83 YFAQELGVPIYATPFTARLVHEK---LVEAGIDRD----VELHVIENNG-----RISLGA 130 Query: 159 IEAIPILQQHG 169 + + H Sbjct: 131 FDIRYVPLAHS 141 >gi|313617764|gb|EFR90001.1| metallo-beta-lactamase family protein [Listeria innocua FSL S4-378] Length = 215 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 11/109 (10%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R + I VY +P ++ + S + + Sbjct: 60 AVLLTHCHYDHIGALEEIRSTY-----QIPVYVSP--LEQEWLSNPDLNLSAHIAGKAIV 112 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 P E ++ + P H I S+ F F + A D Sbjct: 113 AQPAEYEFTLGDYNIEGFRFKVVPTP---GHS-IGSVSFIFDDFAVVGD 157 >gi|149907465|ref|ZP_01896212.1| putative RNAse with metallo-beta-lactamase-like domain [Moritella sp. PE36] gi|149809135|gb|EDM69064.1| putative RNAse with metallo-beta-lactamase-like domain [Moritella sp. PE36] Length = 474 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 14/77 (18%) Query: 52 SNTTVIVDTG---------PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 +V++D G + Q+ + + +I A++ TH H DH+ I Y L Sbjct: 23 DYNSVLIDCGLFQGSEAAGKNNKNQLSIDFNIRTIKALIVTHCHIDHVGRI----PYLLA 78 Query: 102 QKRPIDVYAAPDCMKHL 118 +YA L Sbjct: 79 AGFTGPIYATEATAALL 95 >gi|149189207|ref|ZP_01867494.1| hypothetical protein VSAK1_09623 [Vibrio shilonii AK1] gi|148836961|gb|EDL53911.1| hypothetical protein VSAK1_09623 [Vibrio shilonii AK1] Length = 450 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 10/70 (14%) Query: 52 SNTTVIVDTG----PDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + +V++D G D Y L+ + + A++ TH H DHI + + Sbjct: 28 NGESVLIDCGLFQGADSYNPTLKIDFSLKHVRALILTHAHIDHIGRL----PWLFAAGFR 83 Query: 106 IDVYAAPDCM 115 +Y Sbjct: 84 GPIYCTQATA 93 >gi|73999212|ref|XP_544119.2| PREDICTED: similar to lactamase, beta 2 isoform 1 [Canis familiaris] Length = 288 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GTRRILIDTGEPAITEYISCLKQALTEFNTTIQEIIVTHWHHDHTGGIGDI 89 >gi|75758371|ref|ZP_00738494.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494097|gb|EAO57190.1| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 194 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 64/193 (33%), Gaps = 34/193 (17%) Query: 79 VLYTHPHADHIHGIDGLRGYFLK-----QKRPIDVYAAPDC--MKHLFESFRYCFKALDD 131 VL TH H DH+ + L Y + I VYA D +HL ++ Sbjct: 6 VLLTHLHPDHVGSLGDLIFYGYYSMGKLMEPSITVYAPYDLKIAEHLKTM------GVER 59 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLGFRF--------GNVA 182 TY + + + + PI H + G+ + Sbjct: 60 NTYELVQFWGSVGCHHDDFI-------LNFKPICVNHVDELPCFGYIIKICIDGRNNTIY 112 Query: 183 YCTDVNAFPAESLEKLQ--NLDFLIID-ALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Y D N P L L+ LD+ D + + + H SL + L + ++ + Sbjct: 113 YSGDSNDIPMSILHMLEYGELDYFYQDTCIADYEKNVHLSLRK-LDESIKQEARHKVFC- 170 Query: 240 MHVDLDYDMVLKS 252 MH+D +D Sbjct: 171 MHLDEKFDEQKAK 183 >gi|67539662|ref|XP_663605.1| hypothetical protein AN6001.2 [Aspergillus nidulans FGSC A4] gi|40738560|gb|EAA57750.1| hypothetical protein AN6001.2 [Aspergillus nidulans FGSC A4] gi|259479816|tpe|CBF70385.1| TPA: metallo-beta-lactamase domain protein (AFU_orthologue; AFUA_7G00120) [Aspergillus nidulans FGSC A4] Length = 309 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 52 SNTTVIVDTGPDFY------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++VDTG +VL E+ + I VL TH H DH G+ L Y Sbjct: 60 GRSRILVDTGQGMPSWIRDIAKVLEERDIDISYVLLTHWHGDHTGGVPDLIAYNPALSSR 119 Query: 106 I 106 I Sbjct: 120 I 120 >gi|299769082|ref|YP_003731108.1| methyl parathion hydrolase [Acinetobacter sp. DR1] gi|298699170|gb|ADI89735.1| methyl parathion hydrolase [Acinetobacter sp. DR1] Length = 319 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 25/168 (14%) Query: 54 TTVIVDTGP---------DFYMQVLREQVL--SIDAVLYTHPHADHIHGI--DGLRGY-- 98 +++D G + V ID +L TH H DH+ GI DG Y Sbjct: 97 QNILIDAGTAKCFGPTLGHVRENLKNAGVQPEQIDTILITHAHPDHLCGITLDGKMAYPN 156 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 K +D + + + F+ FK D P ++ + + Sbjct: 157 AKVYLAKEDVDFWTSRTNEAKATDFFKPIFKMTRDALQPYQKAGQLVAFTKTSFNVPNVQ 216 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA-------FPAESLEK 197 ++ + H G DV +P S + Sbjct: 217 LIVTH-GHTEGHSSYLVDGQNGQKFLGLGDVVHYGAVQFPYPDASYKP 263 >gi|251783316|ref|YP_002997621.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391948|dbj|BAH82407.1| Zn-dependent hydrolase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323128040|gb|ADX25337.1| hypothetical protein SDE12394_09555 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 560 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 17/107 (15%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ I +YA P + + L++ Sbjct: 65 NLDRVKALVITHGHEDHIGGIP-----FLLKQANIPIYAGPLALALIR-------GKLEE 112 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 +++ + + H LG Sbjct: 113 HGL-----WRDATVHEINHNTELTFKNMSVTFFRTTHSIPEPLGIVI 154 >gi|118471506|ref|YP_886148.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155] gi|118172793|gb|ABK73689.1| ribonuclease Z [Mycobacterium smegmatis str. MC2 155] Length = 309 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 78/298 (26%), Gaps = 83/298 (27%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 M +LG + VP T +N R N + D Sbjct: 1 MSTR-ELVVLGT--ASQVP-----------TRLRNHNG--------YLLRWDNEGFLFDP 38 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHG---------IDGL------------RG 97 G Q+L V S+ + TH H DH G +D + + Sbjct: 39 GEGTQRQMLLAGVSASSVTHLCLTHFHGDHCLGVPGIVQRMSLDHVAHPVEAHYPASGQE 98 Query: 98 YFLKQK-----------RPIDVYAAPDC------------MKHLFESFRYCFKALDDRTY 134 +F + + R V A + H +S Y D R Sbjct: 99 FFTRLRNASAFHDTVDVRENPVEADGPVAIGAFGTLEARRLDHSVDSIGYRLTEPDSRRI 158 Query: 135 PP-IVNPIVIENNDVPICMKSA----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 ++ I V + G E + G RF A+ D Sbjct: 159 RSDLLALYGIHGPAVGELQREGTIRVGPDTEPEVVHLTQVSEPRPGQRF---AFVMDT-R 214 Query: 190 FPAESLEKLQNLDFLIIDALKNGLH------SSHFSLSESLKKIELINPKNAILTHMH 241 D L+I++ H H + ++ + + + +LTH Sbjct: 215 LCDAVYALADGTDMLVIESTFLNEHAGLALKYGHLTARQAARVAAECHVRKLVLTHFS 272 >gi|115646024|ref|XP_001202680.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115668484|ref|XP_001195521.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 333 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 12/103 (11%) Query: 56 VIVDTGPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDG----LRGYFL---KQKRPI 106 ++D G +Q++R V I + TH H DH G+ G L F+ ++ + Sbjct: 4 WLIDCGEGTQIQLMRSNVRPGRITKIFITHLHGDHSFGLPGLMCTLSAAFMDPDREGSIM 63 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 +Y K++ S + + +Y +V+ + + + + P Sbjct: 64 HIYGPQGLRKYVRVSLE---LSRSELSYSYVVHELQVPDTEFP 103 >gi|20090795|ref|NP_616870.1| dihydropteroate synthase [Methanosarcina acetivorans C2A] gi|19915858|gb|AAM05350.1| dihydropteroate synthase [Methanosarcina acetivorans C2A] Length = 320 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 9/88 (10%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S I + +T V++D ++L+ + I+AV +H H DH G+ L Sbjct: 52 SCLIKVWAGNEEHT-VLMDAAVTPANLFNNAELLKADLGRIEAVALSHGHPDHFLGLVDL 110 Query: 96 RGYFLK-QKRPIDVYAAPDCMKHLFESF 122 + K Q + + + PD L F Sbjct: 111 LKFVSKEQGKEVPLVLHPD--AFLERRF 136 >gi|268558798|ref|XP_002637390.1| Hypothetical protein CBG19097 [Caenorhabditis briggsae] Length = 838 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 61/194 (31%), Gaps = 34/194 (17%) Query: 52 SNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N +++D G D ++ LR + I AVL +HP H+ G+ L Sbjct: 26 DNDYILLDCGWDERFELKYFEELRPYIPKISAVLISHPDPLHLGGLPYLVAKCGLTA--- 82 Query: 107 DVYAAPDCMKHLFESFRY--CFKALDDRTYP---------PIVNPIVIENNDVPICMKSA 155 VY K + + F Y + LD + ++ N + + Sbjct: 83 PVYCTVPVYK-MGQMFIYDLVYSHLDVEEFQHYSLDDVDMAFEKVEQVKYNQTVVLKGDS 141 Query: 156 GGVIEAIPILQQHGR--ISSLGFRFGNVAYCTDVN-----AFPAESLEKLQNLDFLIIDA 208 G A+P G ++ YC D N S + LI A Sbjct: 142 GVNFTAMPAGHMIGGSMWRICRITGEDIIYCVDFNHRKDRHLSGCSFDNFNRPHLLITGA 201 Query: 209 LKNGLHSSHFSLSE 222 H H SL + Sbjct: 202 -----H--HISLPQ 208 >gi|320120573|gb|EFE29041.2| metallo-beta-lactamase family protein [Filifactor alocis ATCC 35896] Length = 555 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + TH H DHI I Y L+ Sbjct: 33 IVIDCGLSFPEDEMLGIDVVIPDVSYLVKNHDKLKGIFLTHGHEDHIGAI----PYVLR- 87 Query: 103 KRPIDVYAAPDCMKHLFES 121 K + +Y + + Sbjct: 88 KLDVPIYGTKFTLALVEHK 106 >gi|295397814|ref|ZP_06807879.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] gi|294973949|gb|EFG49711.1| metallo-beta-lactamase superfamily protein [Aerococcus viridans ATCC 11563] Length = 567 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 27/142 (19%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L+E + V TH HAD I + +L + + V+ ++ Sbjct: 50 PDF--TYLKENQDRVAGVFLTHGHADAIGALP-----YLLKDIQVPVFGTELTIELAK-- 100 Query: 122 FRYCFKALDDRTYPPIVNPIVI-ENNDVPI--CMKSAGGVIEAIP------ILQQHGRIS 172 + +I E+N++ + ++P + G I Sbjct: 101 -----IQTKKIGLKNYQDFHIISEDNEIDFGNVVIKFFKTTHSVPESVGIEVSTPEGSIV 155 Query: 173 SLG-FRFGNV---AYCTDVNAF 190 G F+F AY TD + Sbjct: 156 YTGDFKFDMTVSDAYKTDFSRI 177 >gi|253573583|ref|ZP_04850926.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251847111|gb|EES75116.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 559 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +N V++D+G F + L E + ++ TH H DHI G+ Y Sbjct: 31 ANDIVVIDSGLKFPEEDMLGIDIVIPDITYLTENRDKVRGIVLTHGHEDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCM 115 LK + VY + Sbjct: 87 VLKNLN-VPVYGTKLTL 102 >gi|269836974|ref|YP_003319202.1| beta-lactamase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269786237|gb|ACZ38380.1| beta-lactamase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 555 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 28/141 (19%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F + LR+ + + TH H DHI + L Sbjct: 28 GDDMIVIDAGVGFPEEDMFGVDLLLPDITYLRQNADRVRGIFITHGHEDHIGALAYLLEA 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 VY+ L L +R + +I + P + G Sbjct: 88 VNA-----PVYSTRLTQGLLRNR-------LRERKMLDRADLRLIVPEEDP---RITAGC 132 Query: 159 IEAIPILQQHGRISSLGFRFG 179 H ++GF Sbjct: 133 FTVECFRVSHSIPDAVGFAIE 153 >gi|158520808|ref|YP_001528678.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509634|gb|ABW66601.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 330 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 17/93 (18%) Query: 35 NRRTRSSLKISRVSERGSNTTVIVDTGPDFY----------MQVLREQVLSIDAVLYTHP 84 N R ++ ++ + + G TT+++D G + M+ L + +IDAV+ +H Sbjct: 65 NPRLKTEAGVAYLVKAGE-TTLLMDVGFNKKKAHPSPLLHNMKALDIKPDAIDAVVISHV 123 Query: 85 HADHIHGIDGLR--GYFLKQK----RPIDVYAA 111 H DH+ G+ R + + Q R I VYA Sbjct: 124 HLDHVGGMTEQRTKTFSISQGPVDLREIPVYAT 156 >gi|119719226|ref|YP_919721.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk 5] gi|119524346|gb|ABL77718.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5] Length = 639 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 18/96 (18%) Query: 39 RSSLKISRVSERGSNTTVIVDTG-------PDFYMQVLRE-QVLSIDAVLYTHPHADHIH 90 RS++ + +++D G + + L E + S+DAV+ TH H DH+ Sbjct: 193 RSAVLVQTP-----EANILLDAGLKPTGNGDELPLFDLPEFDLESLDAVVITHAHLDHVG 247 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF-RYC 125 + K VY + F Y Sbjct: 248 AL----PVLFKYGYKGPVYMTEPTLHLSKLLFEDYI 279 >gi|118399152|ref|XP_001031902.1| zinc phosphodiesterase ELAC protein, putative [Tetrahymena thermophila] gi|89286237|gb|EAR84239.1| zinc phosphodiesterase ELAC protein, putative [Tetrahymena thermophila SB210] Length = 837 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 28/95 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G P R S++ I +N +I+D G Y Sbjct: 486 EVVFLGTG----------------SMKPAQYRNVSAIYIR---NNNNNHGIILDCGEGSY 526 Query: 66 MQVLR---------EQVLSIDAVLYTHPHADHIHG 91 Q++ E + ++ + TH H+DH G Sbjct: 527 YQLINQYGEDRVQNEILPNLKIIFITHIHSDHHLG 561 >gi|312171433|emb|CBX79691.1| probable hydroxyacylglutathione hydrolase [Erwinia amylovora ATCC BAA-2158] Length = 330 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 50 RGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S +IVD GP +++ A+L TH H DH+ G++ L L + Sbjct: 98 DDSGRCLIVDPGEAGPVLR--AIKQNHWQPQAILLTHHHYDHVGGVEEL----LVHHPDL 151 Query: 107 DVYAAPDCMK 116 VY + Sbjct: 152 IVYGPQETCD 161 >gi|284165784|ref|YP_003404063.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015439|gb|ADB61390.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 192 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 51 GSNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 TV+VD G +F + +RE+V +DAV+ TH H DH+ ++ ++ F Sbjct: 20 DGERTVLVDAGANFDGVAAVRERVDDLDAVVLTHTHRDHVGNLEAVKDAF 69 >gi|150021301|ref|YP_001306655.1| beta-lactamase domain-containing protein [Thermosipho melanesiensis BI429] gi|149793822|gb|ABR31270.1| beta-lactamase domain protein [Thermosipho melanesiensis BI429] Length = 279 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 60/236 (25%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK------QKRPIDV 108 ++ D G +L +V +I V TH H DHI G+ + +++ +++ Sbjct: 21 RILFDAGEAV-STLLNNKVYAIKHVFLTHGHVDHISGL--WSLVNTRNNAMGDREKALNI 77 Query: 109 Y---AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 Y ++L F + +N +E + I IP Sbjct: 78 YYPKGNRSIEEYLK------FIKKMNSDLKFQLNTFSVEEGEKIILRDKNPRKF-VIPFR 130 Query: 166 QQHGRIS-SLGF----------------RFGNVA-----YCTD---------VNAFPAES 194 H S G+ +A Y +D + ++ Sbjct: 131 VAHTYNEKSFGYHLFEERKKLKKEFLSLEQDKLALLAKEYGSDYLTENIEKKILTISGDT 190 Query: 195 LEKLQNLDFL---II--DAL----KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 L+ D L I+ + ++ + +H L + LK ++ + K IL H+ Sbjct: 191 Y-LLKKEDVLDTEILFHECTFFRKEDRKYKNHAVLEDILKLVKGTSIKKLILYHIS 245 >gi|313680359|ref|YP_004058098.1| metal-dependent hydrolase [Oceanithermus profundus DSM 14977] gi|313153074|gb|ADR36925.1| metal-dependent hydrolase [Oceanithermus profundus DSM 14977] Length = 223 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 32/170 (18%) Query: 77 DAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFESFR--YCFKALDDR 132 D V+ TH H DH L +G + I VYA + + Y F + Sbjct: 43 DLVVLTHAHGDHWGDTLALAGKGATVVSTYEIAVYAEKHGAQAFAMNIGGRYAFPGGWLK 102 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 YP + + GG+ + + +I + G+ A +D+ Sbjct: 103 FYPAW--------HSSSFPDGTYGGMPMGVVVELDGKKI----YHAGDTALFSDMRLIGE 150 Query: 193 ESLEKLQNLDFLII---DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 E LD ++ D G ++L +EL+ PK + H Sbjct: 151 E------GLDLALLPIGDTFTMGP-------DDALTALELLKPKKVVPIH 187 >gi|315501968|ref|YP_004080855.1| ribonuclease z [Micromonospora sp. L5] gi|315408587|gb|ADU06704.1| ribonuclease Z [Micromonospora sp. L5] Length = 309 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 57/245 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL------------ 95 R + ++ D G Q+L V + D + TH H DH G+ G+ Sbjct: 28 RWDDEVILFDPGEGSQRQMLHTGVTATDLTRICVTHFHGDHCLGLPGMIQRLSLDRVPRP 87 Query: 96 ----------RGYFLKQKR------------PIDV----------YAAPDCMKHLFESFR 123 + + PID ++H E++ Sbjct: 88 VAVHFPAGGAEYFARLRHASSFYETAELAVEPIDADGQRITLGIGTLEARRLRHPIETYG 147 Query: 124 YCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D R P + I DV ++ + + + ++ G RF A Sbjct: 148 YRLVEPDGCRMLPERLAAYGIAGPDVGRLLRDGHLDRDGRRVTRDEVSVTRPGQRF---A 204 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 + D ++ D L+I++ ++ H + ++ + + + Sbjct: 205 FVMDT-GLCDGVYALAEHADLLVIESTFLESEAALAAEVGHLTAGQAARVAAESGVRTLV 263 Query: 237 LTHMH 241 LTH Sbjct: 264 LTHFS 268 >gi|227827356|ref|YP_002829135.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|229584574|ref|YP_002843075.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238619511|ref|YP_002914336.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|227459151|gb|ACP37837.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] gi|228019623|gb|ACP55030.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238380580|gb|ACR41668.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] Length = 213 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 7/69 (10%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGY 98 + E N +++D+G + + E + I ++++TH HADHI G ++ + Sbjct: 14 FLIETNENGLILIDSGTPGSGRRIIEGITRLGKNPNKIKSIIFTHSHADHIGGAYEVKRF 73 Query: 99 FLKQKRPID 107 K ID Sbjct: 74 VNDVKFGID 82 >gi|251797383|ref|YP_003012114.1| beta-lactamase [Paenibacillus sp. JDR-2] gi|247545009|gb|ACT02028.1| beta-lactamase domain protein [Paenibacillus sp. JDR-2] Length = 559 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 18/80 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SN VIVD G F + L E + +L TH H DHI G+ Y Sbjct: 30 SNDIVIVDAGLKFPEEDMLGIDIVIPDISYLTENRDKVRGILITHGHEDHIGGL----SY 85 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 L+Q + VY + + Sbjct: 86 VLRQLN-VPVYGTKLTLGLI 104 >gi|118497812|ref|YP_898862.1| metallo-beta-lactamase superfamily protein [Francisella tularensis subsp. novicida U112] gi|194323784|ref|ZP_03057560.1| metallo-beta-lactamase superfamily protein, putative [Francisella tularensis subsp. novicida FTE] gi|118423718|gb|ABK90108.1| metallo-beta-lactamase superfamily protein [Francisella novicida U112] gi|194322148|gb|EDX19630.1| metallo-beta-lactamase superfamily protein, putative [Francisella tularensis subsp. novicida FTE] Length = 320 Score = 45.5 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 39/224 (17%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKRPID 107 + +++D G ++ +D++ TH HADH I + YF K+ + Sbjct: 61 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRTENLP 120 Query: 108 VYAA-------------PDCMKHLFESFRYCFKALDDR-TYPPIVNPIV-IENNDVPICM 152 +F Y L +P ++P+ ++ + Sbjct: 121 FSGPTHSGLFPSATDFLQRVFGKDHGAFAYLHGILTGTDGFPFKLDPVTNVDYTKLEPTK 180 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNLDF 203 + + G + +L ++ G + + + F ++ +N D Sbjct: 181 VFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNADI 240 Query: 204 LII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 L++ DA + LH+ + + +NPK +L+H Sbjct: 241 LMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|312794239|ref|YP_004027162.1| hypothetical protein Calkr_2081 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181379|gb|ADQ41549.1| hypothetical protein Calkr_2081 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 353 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGID 93 S+ I V++D+GP+ + + +D + THPH DHI +D Sbjct: 46 SILIQTP----EGKNVLIDSGPNTAESAVLNFLKSKGIKKLDVTVATHPHEDHIGNMD 99 >gi|302388362|ref|YP_003824184.1| beta-lactamase domain-containing protein [Clostridium saccharolyticum WM1] gi|302198990|gb|ADL06561.1| beta-lactamase domain-containing protein [Clostridium saccharolyticum WM1] Length = 293 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 65/192 (33%), Gaps = 41/192 (21%) Query: 57 IVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++D+G D Q+L + A+ TH +ADHI G + K I YA Sbjct: 32 LIDSGSDKDAGRKVRQILDANEWRLTAIFNTHSNADHIGG---NKYLQSKTGCRI--YAP 86 Query: 112 ----PDCMKHLFE-SFRYCFKALDDRTYPPIVNPIVI----ENNDVPICMKSAGGVIEAI 162 + E SF Y +PP E++ + + I Sbjct: 87 GIECDFTNHTILEPSFLY-------GGFPPTDLRRKFLMAQESSAEYLTEAVLPKGMSVI 139 Query: 163 PILQQHGRISSLGFR-FGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 P+ GFR +V Y D + E+LEK Q G S Sbjct: 140 PLPGH--FFDMAGFRDMDDVVYLADCLS-SKETLEKYQ-----------IGFIYDVSSYL 185 Query: 222 ESLKKIELINPK 233 E+L+ ++ + K Sbjct: 186 ETLEMVKNLKAK 197 >gi|288905689|ref|YP_003430911.1| hydrolase [Streptococcus gallolyticus UCN34] gi|325978718|ref|YP_004288434.1| hydroxyacylglutathione hydrolase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732415|emb|CBI13987.1| putative hydrolase [Streptococcus gallolyticus UCN34] gi|325178646|emb|CBZ48690.1| hydroxyacylglutathione hydrolase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 211 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 20/134 (14%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGI 92 R + L + ++VD G D ++E++ S D A+L TH H DHI G+ Sbjct: 12 RENTYLLV------NDQGIIVVDPGSDVDH--IQEKIASFDKAVVAILITHAHYDHIMGL 63 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVP 149 D +R F P VY + L+ S + F L+ P V E++ D Sbjct: 64 DVIRDAF---GHP-PVYISDKEASWLY-SPKDNFSGLERHADLPDVVLAPAEHHYQYDDD 118 Query: 150 ICMKSAGGVIEAIP 163 + + P Sbjct: 119 YQIAGFRFHVRQTP 132 >gi|284028143|ref|YP_003378074.1| beta-lactamase domain-containing protein [Kribbella flavida DSM 17836] gi|283807436|gb|ADB29275.1| beta-lactamase domain protein [Kribbella flavida DSM 17836] Length = 236 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 33/215 (15%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR---- 104 +++D G + R IDAV+ +H H+DH + L Y K R Sbjct: 23 DKDGFRLLLDLGAGSAGPLQRYATAEDIDAVILSHAHSDHWADVTQLSYYRSKAVREGSA 82 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 P+ +Y P M + S F + + G ++ Sbjct: 83 CGPLRIYG-PSTMNEVLTSNPDDFTSTFVQAG------------------DLELGPLQVR 123 Query: 163 PILQQHGRISSLGFRFGNV-AYCTDVNAFPAESLEKL-QNLDFLIIDAL---KNGLHSSH 217 +HG + R +V Y D P +L++L L+ +A +G H Sbjct: 124 LAQVRHGDLECWASRVDDVLCYTADTE--PCAALDELADGCGVLLAEASGFDADGPLRGH 181 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKS 252 + ++ + + +LTH+ D+ +L Sbjct: 182 LTAGDAGRLAARAGARLLVLTHLRAWQDHLRLLDE 216 >gi|255065460|ref|ZP_05317315.1| metallo-beta-lactamase domain protein [Neisseria sicca ATCC 29256] gi|255050285|gb|EET45749.1| metallo-beta-lactamase domain protein [Neisseria sicca ATCC 29256] Length = 248 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 12/129 (9%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + V+ D G D + +Q L + L++ A+ TH H DH G+ Sbjct: 52 RQNCTLL----WDDETREAVLTDVGGDVPYLLQELDAKNLTLTAIWLTHGHLDHAGGVVE 107 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 LR + RP+ V L ++ A P P + + S Sbjct: 108 LR-----EHRPVPVIGPHADDGFLLQALPET-TAQYGFPVSPAFEPTRWLTEGETLKVGS 161 Query: 155 AGGVIEAIP 163 + IP Sbjct: 162 HAFQVLHIP 170 >gi|153811282|ref|ZP_01963950.1| hypothetical protein RUMOBE_01674 [Ruminococcus obeum ATCC 29174] gi|149832780|gb|EDM87864.1| hypothetical protein RUMOBE_01674 [Ruminococcus obeum ATCC 29174] Length = 539 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + +VD G PD+Y Q + + +D VL TH H DH + Sbjct: 15 SCYYLEAAGKKFLVDCGMEQGPDYYENQDIPVKGSDLDFVLLTHAHMDHSGNL----PAI 70 Query: 100 LKQKRPIDVYAAPDCMK 116 + +YA Sbjct: 71 YAKGFQGPIYATQATCH 87 >gi|260906612|ref|ZP_05914934.1| Zn-dependent hydrolase, glyoxylase [Brevibacterium linens BL2] Length = 223 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 6/80 (7%) Query: 51 GSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +++D D + + A+L TH H DH+ +R + + P V+ Sbjct: 31 DDSEVIVIDPAHDVNAIAEKVGAREVKAILLTHGHDDHVG---VVRDFAHRVGNP-PVHL 86 Query: 111 APDCMKHLFESFRYCFKALD 130 P+ H+ Y D Sbjct: 87 NPE--DHILWDMTYEGYRPD 104 >gi|15679214|ref|NP_276331.1| cleavage and polyadenylation specificity factor [Methanothermobacter thermautotrophicus str. Delta H] gi|2622312|gb|AAB85692.1| cleavage and polyadenylation specificity factor [Methanothermobacter thermautotrophicus str. Delta H] Length = 636 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 19/108 (17%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF----------YMQV 68 P+ DW RS L + N+ V++D G + Y+ V Sbjct: 173 PKYDNDWARLTAMGGFREVGRSCLYLQTP-----NSRVLLDCGVNVAGGDDKNSYPYLNV 227 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + S+DAV+ TH H DH Y VY Sbjct: 228 PEFTLDSLDAVIITHAHLDHSG----FLPYLYHYGYDGPVYCTAPTRD 271 >gi|331270079|ref|YP_004396571.1| comE-like protein, metallo beta-lactamase superfamily hydrolase [Clostridium botulinum BKT015925] gi|329126629|gb|AEB76574.1| comE-like protein, Metallo beta-lactamase superfamily hydrolase [Clostridium botulinum BKT015925] Length = 289 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 88/229 (38%), Gaps = 40/229 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRG 97 S+ I ++ +++D G + + L++ V ++ ++ THPH DHI G+ + Sbjct: 56 SILIQF-----NDKNLLIDAGCNNKKVQRYLKKCGVKRLNYLIATHPHDDHIGGMHYIID 110 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 F ID + AP + +F+ L + + + DV I + Sbjct: 111 EF-----KIDKFLAPKATNN-TATFKNMLIKLKENN----LKITTTKAGDV-IDLDPKLN 159 Query: 158 VIEAIPI------LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEK----LQNLDFLIID 207 + P L + + L + + +C D + + K +++ D Sbjct: 160 IFVVAPSNFNYRNLNNYSIVVKLSYNKTSFLFCGDAENLSEDEILKEGYNIKS------D 213 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 LK G H S + S S ++ +NPK AI++ + + LK Sbjct: 214 ILKLGHHGS--NTSSSKNFLDDVNPKIAIISCGKNNDYGHPHKETLKKL 260 >gi|260428219|ref|ZP_05782198.1| beta-lactamase domain protein [Citreicella sp. SE45] gi|260422711|gb|EEX15962.1| beta-lactamase domain protein [Citreicella sp. SE45] Length = 337 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 11/70 (15%) Query: 53 NTTVIVDTGPDF----YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G + IDAVL +H H DH G+D L P V Sbjct: 24 GRRLLLDMGDGLETGERPDL--SGAGPIDAVLLSHAHVDHAGGLDRLDEI----GNP-PV 76 Query: 109 YAAPDCMKHL 118 +A+ + ++ L Sbjct: 77 FASAETLRQL 86 >gi|170290131|ref|YP_001736947.1| beta-lactamase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174211|gb|ACB07264.1| beta-lactamase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 217 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 43 KISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGL--RGY 98 + + ++++D G +++ E+ L ++A+L TH H DH+ G+ + Sbjct: 31 LCYLIENKAEKNSLLIDAGCPAEDIVRLIEERGLKLEAILITHTHFDHLLGLGEIVRATN 90 Query: 99 FLKQKRPIDVYAAP 112 P+D+ P Sbjct: 91 CRALAHPMDLEMLP 104 >gi|303257337|ref|ZP_07343351.1| putative metallo-beta-lactamase family protein [Burkholderiales bacterium 1_1_47] gi|302860828|gb|EFL83905.1| putative metallo-beta-lactamase family protein [Burkholderiales bacterium 1_1_47] Length = 269 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 15/76 (19%) Query: 40 SSLKISRVSERGSNTTVIVDTGPD---FYMQV--LREQVLSIDAVLYTHPHADHIHGIDG 94 SL + V++DTG + L+ + + A++ +H H DHI G+ Sbjct: 23 CSLL------ETEHGNVMIDTGGTGHVLRHNLDFLKIDLKKVRALVLSHSHHDHISGLLD 76 Query: 95 LRGYFLKQKRPIDVYA 110 + I +YA Sbjct: 77 IVFSCPG----IPIYA 88 >gi|303244279|ref|ZP_07330616.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus okinawensis IH1] gi|302485406|gb|EFL48333.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus okinawensis IH1] Length = 635 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 30/181 (16%) Query: 52 SNTTVIVDTGPDF---------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 + +++D G + + + IDAV+ TH H DH + Sbjct: 201 PESRILIDCGINVAIDGDKAFPHFDAPEFSIEEIDAVVITHAHLDHCG----FVPGLFRY 256 Query: 103 KRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 VY + + Y A + P + + + I + G + Sbjct: 257 GYDGPVYCSKPTRDLMTLLQKDYLDIAEKEGKVMPYSSKDIKKCVKHTIPID-YGVTTDI 315 Query: 162 IPILQ--QHGRISSLGFRFG---------NVAYCTDV----NAFPAESLEKLQNLDFLII 206 P ++ H LG NVAY D+ + ++ + L+ +II Sbjct: 316 APAIKLTMHNAGHILGSAIAHCHIGDGLYNVAYTGDIKFEASRLLEPAVCQFPRLETIII 375 Query: 207 D 207 + Sbjct: 376 E 376 >gi|310659114|ref|YP_003936835.1| s-layer protein, (fragment) [Clostridium sticklandii DSM 519] gi|308825892|emb|CBH21930.1| s-layer protein, putative (fragment) [Clostridium sticklandii] Length = 301 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 28/198 (14%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLR------GYFL 100 + T+++D G + + R V ID ++ THP ADHI G+D + ++L Sbjct: 59 NGRTMLIDAGDNSKGSEVISYLKRNGVSKIDILIGTHPDADHIGGLDDVIEAFEIGEFYL 118 Query: 101 KQKRPIDVYAAPDCMKH-LFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGV 158 +K + + L + + + + I+ + PI K G Sbjct: 119 PRKSH-----TTNTFESVLLAAKSKNLSIKEGYSDRELDYDENIKLKILSPIKSKDYGSD 173 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + + L + + + D + L + D L D +K G H SH Sbjct: 174 ------NNLYSIVVKLDYNQASFLFMGDAEY--KNEYDILASSDNLKSDVVKLGHHGSHS 225 Query: 219 SLSESLKKIELINPKNAI 236 S SL+ + + P A+ Sbjct: 226 ST--SLEFLNAVAPSAAV 241 >gi|288561234|ref|YP_003424720.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] gi|288543944|gb|ADC47828.1| RNA-metabolising metallo-beta-lactamase [Methanobrevibacter ruminantium M1] Length = 636 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 52/173 (30%), Gaps = 34/173 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ-------VL---REQVLSIDAVLYTHPHADH 88 RS + + N+ V++D G + Q +L + +DAV+ +H H DH Sbjct: 193 RSCMLLQTP-----NSRVLLDCGVNVAGQDDKTSFPMLGVPEFSIQDLDAVVLSHAHLDH 247 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENND 147 Y VY + Y A D P V + Sbjct: 248 CG----FIPYLYHYGYEGPVYCTSATRDLMTLLQMDYIDIAHRDNNPLPFNAKHV--QKE 301 Query: 148 VPICMKSAGGVIEAIPILQQ---HGRISSLG-----FRFGNVA----YCTDVN 188 V + GV+ I + H +G F G+ A Y D Sbjct: 302 VKHTITLDYGVVTDISPDIKLTLHNAGHIIGSAMCHFHIGDGAHNLLYTGDFK 354 >gi|302865423|ref|YP_003834060.1| ribonuclease Z [Micromonospora aurantiaca ATCC 27029] gi|302568282|gb|ADL44484.1| ribonuclease Z [Micromonospora aurantiaca ATCC 27029] Length = 309 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 57/245 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL------------ 95 R + ++ D G Q+L V + D + TH H DH G+ G+ Sbjct: 28 RWDDEVILFDPGEGSQRQMLHTGVTATDLTRICVTHFHGDHCLGLPGMIQRLSLDRVPRP 87 Query: 96 ----------RGYFLKQKR------------PIDV----------YAAPDCMKHLFESFR 123 + + PID ++H E++ Sbjct: 88 VAVHFPAGGAEYFARLRHASSFYETAELAVEPIDADGQRITLGIGTLEARRLRHPIETYG 147 Query: 124 YCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D R P + I DV ++ + + + ++ G RF A Sbjct: 148 YRLVEPDGCRMLPERLAAYGIAGPDVGRLLRDGHLDRDGRRVTRDEVSVTRPGQRF---A 204 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 + D ++ D L+I++ ++ H + ++ + + + Sbjct: 205 FVMDT-GLCDGVYALAEHADLLVIESTFLESEAALAAEVGHLTAGQAARVAAESGVRTLV 263 Query: 237 LTHMH 241 LTH Sbjct: 264 LTHFS 268 >gi|259508023|ref|ZP_05750923.1| metal-dependent hydrolase [Corynebacterium efficiens YS-314] gi|259164364|gb|EEW48918.1| metal-dependent hydrolase [Corynebacterium efficiens YS-314] Length = 222 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 65/235 (27%), Gaps = 39/235 (16%) Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D GP + + Q + V ++H H DH L + R YA Sbjct: 2 DMGPGVLAALQKIQDPTDTHVAFSHLHTDHCADFASLLVW-----RRFHPYAPAPGRNL- 55 Query: 119 FESFRYCFKALDDRTYPPIV---NPIVIENNDVPICM-------KSAGGVIEAIPILQQH 168 CF D + +P I++ P H Sbjct: 56 ------CFGPTDTPNRLGRLSSDDPEGIDDMADTFAFSPWVSGQPELVDKFTVTPFRVVH 109 Query: 169 GRISSLGFRFGN------VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL-----HSSH 217 I + R +AY D +A+ ++ +++D + + H Sbjct: 110 -PIQAYAMRVEEHGTGATLAYSGD-SAYTEALIDAARDVDVFLCETTWGPSCEGKIPGMH 167 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYD---MVLKSTPSR-VVPAFDGMQFSS 268 ++ + K I+TH+ D + + GM+ + Sbjct: 168 ICGQDAGQIAAAAGVKKLIVTHVPPWADKEATLAAAAQYYDGPIELGVPGMEMTI 222 >gi|237785979|ref|YP_002906684.1| hypothetical protein ckrop_1401 [Corynebacterium kroppenstedtii DSM 44385] gi|237758891|gb|ACR18141.1| hypothetical protein ckrop_1401 [Corynebacterium kroppenstedtii DSM 44385] Length = 256 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 80/267 (29%), Gaps = 74/267 (27%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 TI+G SL P+ + +S + ++ + VI+D GP Sbjct: 1 MRLTIIGSSGSLAGPQ-----------------SPASSYL--LTPDDGSDPVIMDLGPGA 41 Query: 64 --FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 QV +++TH HADH L ++ P L Sbjct: 42 MGVLPQVTDPGRAH---IVFTHLHADHCLDFPSL--LVWRRFHP-----------QLAAK 85 Query: 122 FRYCFKALDDR----TYPPIVNPIVIENNDVPICMKS-------AGGVIEAIPILQQHGR 170 ++ F D P +++ + S + G + P+ H Sbjct: 86 SKHTFVGPDFSAKHLGLASADAPGDVDDFSDSFVIHSWREGVVQSVGAFDFTPVRVIHPT 145 Query: 171 ISSLGFR------------FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA-----LKNGL 213 + R + AYC + ++ + L+ +A +N Sbjct: 146 -ETYALRAVERGTGHTLVFSADTAYC-------DQLVDLAKGAHTLLCEASWGVSSENAA 197 Query: 214 HSSHFSLSESLKKIELINPKNAILTHM 240 H S E+ K + ILTH+ Sbjct: 198 PDMHMSGPEAAKTATRAGVERLILTHI 224 >gi|305665827|ref|YP_003862114.1| hypothetical protein FB2170_06065 [Maribacter sp. HTCC2170] gi|88710598|gb|EAR02830.1| hypothetical protein FB2170_06065 [Maribacter sp. HTCC2170] Length = 324 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 47/269 (17%) Query: 6 HFTILGCGASLGVPRITGDWGACDP--TNPKNRRTRSSL-KISRVSERGSNTTVIVDTGP 62 ILG G P I C P R SL + +E T + + P Sbjct: 40 SLIILGTVQDAGSPHIACKKDCCKNLFEAPNVNRKVVSLGLVDVQNE----KTFLFEATP 95 Query: 63 DFYMQV--LREQVLS-----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 D Q+ L+++ + + TH H H G+ L K+ V+A P Sbjct: 96 DIATQLKSLKKKTPFNSSEIPNGIFVTHAHIGHYTGLMYLGKEATNAKK-TRVFAMPKMK 154 Query: 116 KHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI--SS 173 L ++ + N I++E ++ + I+ P H + Sbjct: 155 TFLEQNGPW--------GQLVTNNNILLEEIRNNTTIELS-QKIKVTPFKVPHRDEYSET 205 Query: 174 LGFRF----GNVAYCTDVNAFPA---ESLEKLQNLDFLIIDAL---------KNGLHSSH 217 +G++ V + D++ + ++ ++++D ++DA ++ H Sbjct: 206 VGYKIIGPNKTVLFIPDIDKWSKWETNIIDVVKDVDIALLDATFFNTEEINNRDISEIPH 265 Query: 218 FSLSESLKKIELINPK----NAILTHMHV 242 + E+++ + +PK H++ Sbjct: 266 PFVIETMELFKN-HPKDVKNKIHFIHLNH 293 >gi|329769814|ref|ZP_08261215.1| ribonuclease J 1 [Gemella sanguinis M325] gi|328838176|gb|EGF87794.1| ribonuclease J 1 [Gemella sanguinis M325] Length = 556 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 32/153 (20%) Query: 42 LKISRVSERGSNTTVI-VDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + I + ++ +D Y + + + I A++ TH H DHI G+ FL Sbjct: 34 IVIIDAGVKFPGDNILGIDYVIPDYS-YIEKNIDKIKALIITHGHEDHIGGLP-----FL 87 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN-------------ND 147 +K + +Y P + + L++ VI+ ++ Sbjct: 88 LRKVSLPIYGGPLAIGLIR-------SKLEEHNLLGRAELNVIDEDTVLEYKYLKVSFHN 140 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + + GVI P G I G F+F Sbjct: 141 TTHSIPDSYGVIVGTP----QGNIVHTGDFKFD 169 >gi|167043327|gb|ABZ08031.1| putative Metallo-beta-lactamase superfamily protein [uncultured marine crenarchaeote HF4000_ANIW141N1] Length = 422 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 48/194 (24%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---------PDFYMQVLREQVLSIDAVLYTHPHADHI 89 RS + T +++D G P Y L + +DA + TH H DH Sbjct: 14 RSGFLVKC-----DRTNILLDYGVMFAKRRDDPPLYP--LHIKPKDVDAAVITHAHLDHS 66 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDC-------------MKHLFESFRYCFKALDDRTYPP 136 + L VYA P ++ SF Y + Sbjct: 67 GCVPSL-----FIGGNTHVYATPPTHDLSILLIEDMLKIEKNKHSFDYRHVNNMIKNSKE 121 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA-----FP 191 I ++ + ++++G VI +L S G R + Y D+N P Sbjct: 122 IGFREPVKIGNATFELRASGHVIGGSTVLV-----ESEGKR---LFYTGDINLRGSRMLP 173 Query: 192 AESLEKLQNLDFLI 205 L+ + ++D LI Sbjct: 174 EADLD-MGDIDLLI 186 >gi|315924150|ref|ZP_07920376.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622552|gb|EFV02507.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC 23263] Length = 211 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 43 KISRVSERGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 I+ E G VI+D G + Q + +Q +SI A+L TH H DHI G++ R Sbjct: 21 YIAWSQEDGQG--VIIDPG-GWRPEIAQFITDQAISIKAILLTHGHFDHIGGLNEARALT 77 Query: 100 LKQKRPIDVYAAPDCMKHL 118 VY D L Sbjct: 78 GA-----PVYIHADDADCL 91 >gi|302338840|ref|YP_003804046.1| beta-lactamase [Spirochaeta smaragdinae DSM 11293] gi|301636025|gb|ADK81452.1| beta-lactamase domain protein [Spirochaeta smaragdinae DSM 11293] Length = 285 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGID 93 R ++++ I + E +++D G L + ID +L TH HADHI G++ Sbjct: 32 RNYQTNVLIIKGRE-----HLLIDCGTRCGYAFTELGSSLADIDTMLITHSHADHIGGLE 86 Query: 94 GLRGYFLKQKRP 105 ++R Sbjct: 87 EALLMARYERRR 98 >gi|292487327|ref|YP_003530199.1| putative hydroxyacylglutathione hydrolase [Erwinia amylovora CFBP1430] gi|291552746|emb|CBA19791.1| probable hydroxyacylglutathione hydrolase [Erwinia amylovora CFBP1430] Length = 330 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 50 RGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S +IVD GP +++ A+L TH H DH+ G++ L L + Sbjct: 98 DDSGRCLIVDPGEAGPVLR--AIKQNHWQPQAILLTHHHYDHVGGVEEL----LVHHPDL 151 Query: 107 DVYAAPDCMK 116 VY + Sbjct: 152 IVYGPQETCD 161 >gi|189426463|ref|YP_001953640.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422722|gb|ACD97120.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 593 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 22/90 (24%) Query: 44 ISRVSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADH 88 I+ ++ + ++VD G PDF LRE+ + +L TH H DH Sbjct: 61 INCMAYEYGDDLILVDAGLMFPDADMPGVDYVIPDFSW--LRERADKLRGILLTHGHEDH 118 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 I + FL ++ P +Y + L Sbjct: 119 IGALP-----FLLREFPAPIYGTALTLGIL 143 >gi|320527455|ref|ZP_08028636.1| hypothetical protein HMPREF9430_00746 [Solobacterium moorei F0204] gi|320132168|gb|EFW24717.1| hypothetical protein HMPREF9430_00746 [Solobacterium moorei F0204] Length = 617 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 47/156 (30%), Gaps = 33/156 (21%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLR 96 + +IVD G F L + I A++ TH H DHI GI Sbjct: 60 EHDDEIIIVDCGVLFPEDALLGVDYVIPDYSYLVKNQNKIAAMVITHGHEDHIGGI---- 115 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +FLK R +YA + K L++ + I + + Sbjct: 116 PFFLKTIRLKQIYAPRFAKALIE-------KKLEEHRLTRVCKITEINSESSIKTKYFSI 168 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G + H +LG G + D Sbjct: 169 GFFNVV-----HSIPDALGVLINTPNGRIVETGDFK 199 >gi|297189904|ref|ZP_06907302.1| beta-lactamase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297150306|gb|EDY62468.2| beta-lactamase domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 554 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 40/195 (20%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ + ++ TH H DHI G+ Y L+++ I V + + L Sbjct: 63 IRDRLDDVVGIVLTHGHEDHIGGV----PYLLRERSDIPVVGSKLTLAFLE-------AK 111 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L + P P+ + D + G + + H SL G V + Sbjct: 112 LKEHGIRP--RPVRVREGD-----RRGFGPFDCEFVAVNHSIPDSLAVAIRTSAGMVLHT 164 Query: 185 TDVN--------AFPA-ESLEKL--QNLDFLIIDALK---NGLHSSHFSLSESLKKIELI 230 D + +L + +D + D+ G +S L+ +++++ Sbjct: 165 GDFKMDQFPLDDRITDLRAFARLGEEGVDLFLTDSTNAEVPGFTTSERELNPAIEQVMRT 224 Query: 231 NPKNAIL----THMH 241 P+ I+ +H+H Sbjct: 225 APRRVIVSSFASHVH 239 >gi|240104132|ref|YP_002960441.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] gi|239911686|gb|ACS34577.1| Metallo-beta-lactamase superfamily protein [Thermococcus gammatolerans EJ3] Length = 211 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 48/220 (21%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVY 109 +++D PD + + +D +L TH H DH + LRG + +P+ Sbjct: 17 GVKILIDPYPDVDDDL----IGDVDYILITHEHTDHYGKVELLSRLRGATVIGPKPV--- 69 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 Y D T V E ++ G + A + Sbjct: 70 --------------YLMAIADGVT-------RVREISEGETIELGEGVKVTAFFMEHPSS 108 Query: 170 RISSLGFRFG---NVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESLK 225 + LG+ + + D +FP SL++L+ +D L L S + E+ + Sbjct: 109 QYP-LGYLIEGDKRLFHTGDTYSFP--SLQRLRGKVDVL----LVPISGRSTANEREAAQ 161 Query: 226 KIELINPKNAILTHMHVD----LDYDMVLKSTPSRVVPAF 261 +E I P+ I+ MH D + ++ + AF Sbjct: 162 IVEDIRPR--IVIPMHYGTYGNGDPEKLINELRKNRIFAF 199 >gi|89894191|ref|YP_517678.1| hypothetical protein DSY1445 [Desulfitobacterium hafniense Y51] gi|89333639|dbj|BAE83234.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 275 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 20/131 (15%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQV-------LSIDAVLYTHPHADHIHGIDGLRGYFLK 101 E + V+VDTG + Q + E V ++ TH H DH+ + L Y+ Sbjct: 40 EGEGSKWVLVDTGLENSSQFILESVHSRFGKNSRPQVIILTHGHFDHVGSVKELAEYW-- 97 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 + VYA ++ Y D P V ++ Sbjct: 98 ---DVPVYA--HTLE-----LPYLTGKKDYPLADPGVGGGLVSGISTTFPHTRIDLEYRI 147 Query: 162 IPILQQHGRIS 172 P+ HG + Sbjct: 148 FPLP-DHGAVP 157 >gi|328543702|ref|YP_004303811.1| RNA-metabolising metallo-beta-lactamase family [Polymorphum gilvum SL003B-26A1] gi|326413446|gb|ADZ70509.1| RNA-metabolising metallo-beta-lactamase family [Polymorphum gilvum SL003B-26A1] Length = 555 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 39/135 (28%), Gaps = 39/135 (28%) Query: 48 SERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 G T ++VD G PD L + I ++ TH H DH + Sbjct: 28 GPDGDRTWLVVDCGVTFAGPELPGVDLVLPDIR--FLEGERDRIAGIVITHAHEDHYGAL 85 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 L VYA P L + + P ++P+ + Sbjct: 86 LHLWP-----HLRAPVYATPFTAGLLA-------AKAESEPHAP----------EIPVTI 123 Query: 153 KSAGGVIEAIPILQQ 167 + G + P + Sbjct: 124 VNQGDRLNIGPFDVE 138 >gi|139439597|ref|ZP_01773010.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC 25986] gi|133774938|gb|EBA38758.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC 25986] Length = 459 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%) Query: 35 NRRTRSSLKISRVSE------RGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHA 86 +R S+ + V + R +VD G D ++R V IDAV TH Sbjct: 210 DRFAPPSVTVLDVGQADAILIRQGGAVALVDCGLDERVVAALVRNNVHHIDAVFVTHWDE 269 Query: 87 DHIHGI 92 DH G+ Sbjct: 270 DHWGGL 275 >gi|85860535|ref|YP_462737.1| ribonuclease Z [Syntrophus aciditrophicus SB] gi|85723626|gb|ABC78569.1| metal-dependent hydrolases of the beta-lactamase superfamily III protein [Syntrophus aciditrophicus SB] Length = 347 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 + +V+ D G D + RE +L I + +H H DH G D + L + R I ++ P Sbjct: 24 HESVLFDLG-DLHKLAPRE-ILKIGHIFVSHTHVDHFIGFDTILRICLGRNRRIRLFGPP 81 >gi|307126811|ref|YP_003878842.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 670-6B] gi|306483873|gb|ADM90742.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 670-6B] Length = 539 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 41 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 90 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 91 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 146 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 147 FKFDQTASESYATDFARLAE 166 >gi|306833905|ref|ZP_07467029.1| metallo-beta-lactamase [Streptococcus bovis ATCC 700338] gi|304423906|gb|EFM27048.1| metallo-beta-lactamase [Streptococcus bovis ATCC 700338] Length = 211 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 20/134 (14%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGI 92 R + L + ++VD G D ++E++ S D A+L TH H DHI G+ Sbjct: 12 RENTYLLV------NDQGIIVVDPGSDVDH--IQEKIASFDKPVVAILITHAHYDHIMGL 63 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVP 149 D +R F P VY + L+ S + F L+ P V E++ D Sbjct: 64 DVIRDAF---GHP-PVYISDKEASWLY-SPKDNFSGLERHADLPDVVLAPAEHHYQYDDD 118 Query: 150 ICMKSAGGVIEAIP 163 + + P Sbjct: 119 YQIAGFRFHVRQTP 132 >gi|301793802|emb|CBW36194.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV104] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|325983348|ref|YP_004295750.1| hydroxyacylglutathione hydrolase [Nitrosomonas sp. AL212] gi|325532867|gb|ADZ27588.1| hydroxyacylglutathione hydrolase [Nitrosomonas sp. AL212] Length = 257 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Query: 57 IVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 I+D G M+ LR + L A+L TH H+DHI G+ L +F I VY Sbjct: 26 IIDPGTAVPVMEYLRLKKLQPRAILITHHHSDHIGGVAELLQWF-----DIPVYGP 76 >gi|225856311|ref|YP_002737822.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae P1031] gi|225725476|gb|ACO21328.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae P1031] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|225854145|ref|YP_002735657.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae JJA] gi|225724249|gb|ACO20102.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae JJA] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|240145914|ref|ZP_04744515.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|257201979|gb|EEV00264.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|291535172|emb|CBL08284.1| conserved hypothetical protein [Roseburia intestinalis M50/1] gi|291539700|emb|CBL12811.1| conserved hypothetical protein [Roseburia intestinalis XB6B4] Length = 584 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L++ + + TH H DHI I Y Sbjct: 60 EDSIIVVDCGLSFPEDDMYGIDLVIPDVTYLKDNIDKVKGFFITHGHEDHIGAI----PY 115 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 L+ + +YA + + Sbjct: 116 VLRDIN-VPIYATKLTIGIIEHK 137 >gi|289580147|ref|YP_003478613.1| beta-lactamase [Natrialba magadii ATCC 43099] gi|289529700|gb|ADD04051.1| beta-lactamase domain protein [Natrialba magadii ATCC 43099] Length = 192 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N TV+VDTG +F + ++ +V +DAV+ TH H DH+ + + F +DV+ Sbjct: 21 GNRTVLVDTGANFDVVDAIQSRVDGLDAVVLTHTHRDHVGNVAAVTDAF-----DVDVWG 75 Query: 111 APDCMKHLFES 121 D + + + Sbjct: 76 YDDTIDAVDHA 86 >gi|169833215|ref|YP_001694091.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] gi|168995717|gb|ACA36329.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae Hungary19A-6] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|168488297|ref|ZP_02712496.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae SP195] gi|183573069|gb|EDT93597.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae SP195] gi|332074418|gb|EGI84894.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17570] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|168482845|ref|ZP_02707797.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1873-00] gi|172043682|gb|EDT51728.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1873-00] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|148992280|ref|ZP_01822003.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] gi|237649855|ref|ZP_04524107.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CCRI 1974] gi|237821282|ref|ZP_04597127.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CCRI 1974M2] gi|147928906|gb|EDK79918.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP9-BS68] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|149002293|ref|ZP_01827235.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] gi|147759608|gb|EDK66599.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS69] Length = 503 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|148983993|ref|ZP_01817312.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP3-BS71] gi|148998286|ref|ZP_01825755.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|149005723|ref|ZP_01829462.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|168490501|ref|ZP_02714644.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC0288-04] gi|168576488|ref|ZP_02722362.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae MLV-016] gi|194397551|ref|YP_002037271.1| hypothetical protein SPG_0556 [Streptococcus pneumoniae G54] gi|307067228|ref|YP_003876194.1| putative metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae AP200] gi|147755929|gb|EDK62973.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP11-BS70] gi|147762663|gb|EDK69623.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP18-BS74] gi|147924140|gb|EDK75252.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP3-BS71] gi|183574979|gb|EDT95507.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC0288-04] gi|183577703|gb|EDT98231.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae MLV-016] gi|194357218|gb|ACF55666.1| conserved hypothetical protein [Streptococcus pneumoniae G54] gi|301799658|emb|CBW32218.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae OXC141] gi|306408765|gb|ADM84192.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus pneumoniae AP200] gi|332076446|gb|EGI86909.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA41301] gi|332077042|gb|EGI87504.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA17545] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|15900521|ref|NP_345125.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|15902582|ref|NP_358132.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae R6] gi|111657548|ref|ZP_01408288.1| hypothetical protein SpneT_02001249 [Streptococcus pneumoniae TIGR4] gi|116516084|ref|YP_816034.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae D39] gi|148988978|ref|ZP_01820378.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|149010769|ref|ZP_01832140.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|149021573|ref|ZP_01835628.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|168485725|ref|ZP_02710233.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1087-00] gi|168492774|ref|ZP_02716917.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC3059-06] gi|182683543|ref|YP_001835290.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|221231435|ref|YP_002510587.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225858447|ref|YP_002739957.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 70585] gi|225860610|ref|YP_002742119.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229720|ref|ZP_06963401.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255472|ref|ZP_06979058.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502404|ref|YP_003724344.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|303253937|ref|ZP_07340058.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|14972088|gb|AAK74765.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae TIGR4] gi|15458113|gb|AAK99342.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076660|gb|ABJ54380.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae D39] gi|147765250|gb|EDK72179.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP19-BS75] gi|147925475|gb|EDK76552.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP6-BS73] gi|147930269|gb|EDK81254.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP23-BS72] gi|182628877|gb|ACB89825.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae CGSP14] gi|183571254|gb|EDT91782.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC1087-00] gi|183577041|gb|EDT97569.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae CDC3059-06] gi|220673895|emb|CAR68401.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae ATCC 700669] gi|225721980|gb|ACO17834.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae 70585] gi|225727965|gb|ACO23816.1| metallo-beta-lactamase family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298237999|gb|ADI69130.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus pneumoniae TCH8431/19A] gi|301801481|emb|CBW34173.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae INV200] gi|302599113|gb|EFL66138.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS455] gi|327390347|gb|EGE88688.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae GA04375] Length = 553 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENSDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDENTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|297619164|ref|YP_003707269.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3] gi|297378141|gb|ADI36296.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3] Length = 635 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 37/201 (18%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYT 82 R+S + + + + +++D G + M + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCLYHQTPESRIMIDCGINVGMDDEKAFPHFDAPEFSIEEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV 142 H H DH + VY + L + + + ++ P+ Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPT-RDLMTLLQKDYIDIAEKEGKPVPYTSR 295 Query: 143 IENNDVPICMKSAGGVIEAIPILQQ---HGRISSLGFRFG---------NVAYCTDV--- 187 N + + GV I + H LG NVAY D+ Sbjct: 296 DVKNAIKHTIPLDYGVTTDIAPAVKLTLHNAGHILGSAIAHCHIGDGLYNVAYTGDIKFE 355 Query: 188 -NAFPAESLEKLQNLDFLIID 207 + ++ + L+ LI++ Sbjct: 356 ASRLLEPAVCQFPRLETLIME 376 >gi|153939117|ref|YP_001389895.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|152935013|gb|ABS40511.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|295317978|gb|ADF98355.1| metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 290 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 21/194 (10%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++DTG ++Y + V ID V+ TH H DH G+ + K ++ Sbjct: 48 GKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGL-EMLLKTSKVRK-- 104 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++ + Y I + ++ + + A I + Sbjct: 105 -IFLPKHDSDDKKKVISTI--KKHKVNYAWIEDGWEVKGRKLNLK---AIVPINVDSKNE 158 Query: 167 QHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 + I G + V Y D E ++ + N D LK H F S S Sbjct: 159 NNNSIVLFG-KIDGVKYLFLGDCEK--REEMDMISNKKIKECDVLKVSHHG--FKTSNSD 213 Query: 225 KKIELINPKNAILT 238 + +++ PK AI+T Sbjct: 214 ELLDIAKPKIAIVT 227 >gi|148378533|ref|YP_001253074.1| metallo beta-lactamase superfamily hydrolase [Clostridium botulinum A str. ATCC 3502] gi|153932978|ref|YP_001382921.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153936510|ref|YP_001386350.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|148288017|emb|CAL82084.1| putative metallo beta-lactamase superfamily hydrolase [Clostridium botulinum A str. ATCC 3502] gi|152929022|gb|ABS34522.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152932424|gb|ABS37923.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] Length = 290 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 21/194 (10%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++DTG ++Y + V ID V+ TH H DH G+ + K ++ Sbjct: 48 GKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGL-EMLLKTSKVRK-- 104 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++ + Y I + ++ + + A I + Sbjct: 105 -IFLPKHDSDDKKKVISTI--KKHKVNYAWIEDGWEVKGRKLNLK---AIVPINVDSKNE 158 Query: 167 QHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 + I G + V Y D E ++ + N D LK H F S S Sbjct: 159 NNNSIVLFG-KIDGVKYLFLGDCEK--REEMDMISNKKIKECDVLKVSHHG--FKTSNSD 213 Query: 225 KKIELINPKNAILT 238 + +++ PK AI+T Sbjct: 214 ELLDIAKPKIAIVT 227 >gi|118587791|ref|ZP_01545201.1| hypothetical protein SIAM614_09458 [Stappia aggregata IAM 12614] gi|118439413|gb|EAV46044.1| hypothetical protein SIAM614_09458 [Stappia aggregata IAM 12614] Length = 274 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 40/225 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-- 99 S R + V+VD G ++ + + D +L+TH H DHI G+ + + Sbjct: 31 SCFEIRAGDALVLVDCGSGARNLGVEICSCKTRTFD-LLFTHTHLDHICGLPFFKPAYDP 89 Query: 100 -LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + + PPI V +AG Sbjct: 90 SFNVTAWAGHFQDDTSLVDIVSRI----------MSPPIFPVAAKTLKAVEFKSFTAGDQ 139 Query: 159 I------EAIPILQQHGRISSLGFRFG----NVAYCTDV----NAFPAESLEKLQNLDFL 204 I H + G+RF ++ TD A + ++N D + Sbjct: 140 IPRTDGLVIRTTRLNHPG-GACGYRFEFQGKSICIITDHEHGDPEIDAALPDFVRNADVM 198 Query: 205 IIDAL------KNGLHSSHFSLSESLKKIELINPKNAILTHMHVD 243 I DA+ + H + ++++ + N K +L H D Sbjct: 199 IYDAMFTDEEYRTYKGWGHSTWQKAVELAKAGNVKTPVL--FHHD 241 >gi|72383088|ref|YP_292443.1| hypothetical protein PMN2A_1250 [Prochlorococcus marinus str. NATL2A] gi|72002938|gb|AAZ58740.1| Conserved hypothetical protein MG423 [Prochlorococcus marinus str. NATL2A] Length = 644 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 LRE I ++ TH H DHI GI L+ + + PI VY P M L Sbjct: 67 LRENQNRIRGLVVTHGHEDHIGGISHHLKNFNI----PI-VYGPPLAMSMLRGKM 116 >gi|320449268|ref|YP_004201364.1| metallo-beta-lactamase family protein [Thermus scotoductus SA-01] gi|320149437|gb|ADW20815.1| metallo-beta-lactamase family protein [Thermus scotoductus SA-01] Length = 431 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 59/202 (29%), Gaps = 37/202 (18%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G + ++DAV+ TH H DH+ + L ++ Sbjct: 22 EGRKILLDCGMFQGREEEKNHTPFGFDPQAVDAVVLTHAHLDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 VYA ++ + F +D V + + G Sbjct: 78 GPVYATQATFLLMQIILQDALKVMETPFFEEED------VEEALRHVRLLEFGEWLRLGD 131 Query: 159 IEAIPILQQHGRISSLGFRF-----GNVAYCTDVNA-----FPAESLEKLQNLDFLIIDA 208 + H + F + Y D+ P SL +L L Sbjct: 132 LTLTFGQAGH--LPGSAFVVVQGEGKTLVYSGDLGNRQKTVLPDPSLPPKADL-ILCEGT 188 Query: 209 LKNGLHSSH-FSLSESLKKIEL 229 + H S ++ E L+ +E Sbjct: 189 YGDRPHRSFAATVQEFLEILER 210 >gi|307244323|ref|ZP_07526437.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492289|gb|EFM64328.1| metallo-beta-lactamase domain protein [Peptostreptococcus stomatis DSM 17678] Length = 288 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 52 SNTTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGL 95 N +++D G D Y + R + +DAV+ TH +DHI G+D + Sbjct: 52 DNKNILIDGGEDEYSRNVIRHLKRSHIKKLDAVIGTHFDSDHIGGLDKV 100 >gi|227326290|ref|ZP_03830314.1| hypothetical protein PcarcW_02844 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 354 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 49/203 (24%), Gaps = 46/203 (22%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 V ID +L TH H DH + L R Sbjct: 141 DVPEIDYLLITHDHWDH---------------------LDYPTLNALRGKIRRIVTPTGV 179 Query: 132 RTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-------------- 175 +Y I C+K G I +P GR+ Sbjct: 180 GSYFVKWGFPQTDITEGGWFSCLKENGVDIHVLPTQHFSGRLLKHNQTLWGSFALITPQY 239 Query: 176 --FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSSHFSLSESLKKIELIN 231 + G+ Y +L D I++ + H + ES + + Sbjct: 240 RLYLGGDSGYGAHYKEIAE----RLGGFDIAILECGQYDRDWPHVHMTPEESAQAASDLQ 295 Query: 232 PKNAILTHMH-VDLDYDMVLKST 253 K + +H L + Sbjct: 296 AKAVLPSHNSKFKLAHHRWNDPL 318 >gi|153872457|ref|ZP_02001344.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152071077|gb|EDN68656.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 354 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Query: 37 RTRSSLKISRVSERGSNTT---VIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHG 91 R +S+ I + +++D G D + + S +D + +HPH DHI G Sbjct: 58 RWQSNFLIEFDTPNKKGKRPYRLLIDAGGDVRHALKNLGLTSADMDGIYISHPHNDHIGG 117 Query: 92 I 92 + Sbjct: 118 M 118 >gi|148263942|ref|YP_001230648.1| DNA internalization-related competence protein ComEC/Rec2 [Geobacter uraniireducens Rf4] gi|146397442|gb|ABQ26075.1| DNA internalization-related competence protein ComEC/Rec2 [Geobacter uraniireducens Rf4] Length = 797 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 79/238 (33%), Gaps = 54/238 (22%) Query: 59 DTGPDFYMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRGYF----LKQKRPIDVYAAPD 113 D G L + ID ++ TH H DH+ G+ + F + VYA + Sbjct: 570 DVGERLLAPALWSMGIRRIDYMVLTHIHPDHLQGLLYIADNFDVGEFWESG---VYAESE 626 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI-PILQQHGRIS 172 + L + L + P + E N + AG IE + P HG Sbjct: 627 DYRTLK-------RILVAKRVP------LREVNASNPAITVAGARIEFLSPESPAHGGAD 673 Query: 173 S-------------LGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFS 219 L +R G+V + D+ + N L LK H S +S Sbjct: 674 CNHGDPNDDSLAFRLVYREGSVLFTGDMGT--EAEQRLICNPQRLGATVLKVAHHGSRYS 731 Query: 220 LSESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPSR------------VVPAFD 262 S+S ++ ++P+ A+++ L L + + A+D Sbjct: 732 TSQS--FLDAVSPEIAVISAGYGNSFHLPAAETLSKLRGKGVQTCRTDLDGTIHLAYD 787 >gi|326330100|ref|ZP_08196412.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] gi|325952110|gb|EGD44138.1| metallo-beta-lactamase family protein [Nocardioidaceae bacterium Broad-1] Length = 561 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 50/119 (42%), Gaps = 20/119 (16%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + + G + ++ D GP +R+++ ++A++ TH H DHI Y Sbjct: 48 CGVLFPEEQQPGVDL-ILPDFGP------IRDRLGDVEALVLTHGHEDHIG----ATPYL 96 Query: 100 LKQKRPIDVYAAPDCMK---------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 L++++ I + + + L E+ ++ + D ++ P V N+ +P Sbjct: 97 LRERQDIPLVGSELTLALLGSKLREHRLRETVQHKVREGDTISFGPFELEFVAVNHSIP 155 >gi|322698130|gb|EFY89903.1| metallo-beta-lactamase domain protein [Metarhizium acridum CQMa 102] Length = 306 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 52 SNTTVIVDTGPDFY------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + +++DTG +QVL ++ L + +L TH H DH G+ L Sbjct: 60 GKSRILIDTGEGLPCWIERVIQVLEDRQLDLSFILLTHWHGDHTGGVPDLIS 111 >gi|170761029|ref|YP_001785755.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169408018|gb|ACA56429.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 287 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDNLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|153933569|ref|YP_001382799.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153937338|ref|YP_001386366.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|152929613|gb|ABS35113.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152933252|gb|ABS38751.1| metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] Length = 287 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G D + L+ + + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKNSDNLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|148378418|ref|YP_001252959.1| metallo beta-lactamase superfamily lipoprotein [Clostridium botulinum A str. ATCC 3502] gi|148287902|emb|CAL81968.1| metallo beta-lactamase superfamily lipoprotein [Clostridium botulinum A str. ATCC 3502] Length = 287 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 S+ + + +++D G L ++ + +D V+ THPH DHI G+ Sbjct: 53 SILVQT-----KDKNILIDAGTRKSSDNLISYLKKQHIKKLDYVIATHPHEDHIGGM 104 >gi|68250202|ref|YP_249314.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae 86-028NP] gi|81335376|sp|Q4QJZ3|GLO2_HAEI8 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|68058401|gb|AAX88654.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae 86-028NP] Length = 233 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHEDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|116629819|ref|YP_814991.1| mRNA degradation ribonuclease J1/J2enzyme [Lactobacillus gasseri ATCC 33323] gi|238853988|ref|ZP_04644345.1| ribonuclease J 1 [Lactobacillus gasseri 202-4] gi|311110539|ref|ZP_07711936.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] gi|116095401|gb|ABJ60553.1| RNase J1 [Lactobacillus gasseri ATCC 33323] gi|238833433|gb|EEQ25713.1| ribonuclease J 1 [Lactobacillus gasseri 202-4] gi|311065693|gb|EFQ46033.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri MV-22] Length = 559 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 49/150 (32%), Gaps = 33/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 33 IIMDCGIKFPEDDMMGINYVISDYSYLVKNRKKIKALVVTHGHEDHIGGI----PYLLKK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I VYA P + + LD+ I+N + +K + Sbjct: 89 IPEIPVYATPFALALIR-------GKLDEHG---ILNSSELHEEHEDTVLKFDKLSVSF- 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG G V + D Sbjct: 138 -FRTTHSIPDTLGIAVHTPEGAVVFTGDFK 166 >gi|304404309|ref|ZP_07385971.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] gi|304347287|gb|EFM13119.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus curdlanolyticus YK9] Length = 559 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 47/154 (30%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N VIVD G F + L E + +L TH H DHI G+ + Sbjct: 31 GNDIVIVDAGLKFPEEDMLGIDIVIPDISYLTENRDKVRGILVTHGHEDHIGGL----PF 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK + V+ + + L + I+I + + G Sbjct: 87 VLKNLN-VPVFGTKLTLGLIE-------GKLKEAGLLGETKRILINADS-----EVQLGS 133 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I A H SLG G V + D Sbjct: 134 IVATFFKTNHSIPDSLGVCLDTPEGRVVHTGDFK 167 >gi|320449946|ref|YP_004202042.1| metal-dependent hydrolase [Thermus scotoductus SA-01] gi|320150115|gb|ADW21493.1| metal-dependent hydrolase [Thermus scotoductus SA-01] Length = 224 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 36/172 (20%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKR-----PIDVYAAPDCMKHLFESFR--YCFKAL 129 D +L TH H DH K I YA K + + Y F Sbjct: 43 DLILVTHAHGDHFG---DAVALSKKGGTVVSTFEIATYAEKHGAKAVPMNIGGTYRFPGG 99 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA 189 + +P + + GG+ + + RI + G+ A +D+ Sbjct: 100 WLKWFPAW--------HSSSFPDGTYGGMPMGVVVELGGKRI----YHAGDTALFSDMRL 147 Query: 190 FPAESLEKLQNLDFLIIDALKNGLHSSHFSL--SESLKKIELINPKNAILTH 239 LD + HF++ ++LK +EL+ PK + H Sbjct: 148 IGEL------GLDLAFL------PIGDHFTMGPEDALKALELLKPKRVVPIH 187 >gi|302883710|ref|XP_003040754.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256721644|gb|EEU35041.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 289 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 8/54 (14%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++DTG + +E +IDA L TH H DH GI L Sbjct: 42 GRRRLLIDTGEGRNAWITSIRDTLQQEN-ATIDAALITHWHHDHTGGIKDLLSI 94 >gi|226356971|ref|YP_002786711.1| beta-lactamase-like protein [Deinococcus deserti VCD115] gi|226318961|gb|ACO46957.1| putative beta-lactamase-like protein [Deinococcus deserti VCD115] Length = 558 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 26/189 (13%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 + L++ I + TH H DHI G+ Y L + + VY AP + + E Sbjct: 65 RIDYLQQNAELIKGWILTHGHEDHIGGL----PYILPRLPRVPVYGAPLTLGLVREKLAE 120 Query: 125 C--------FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG- 175 + D I +E + + G I P+ G++ G Sbjct: 121 FGLKDGDIDLREADTNAKVQIGTHFGVEFIRMTHSIPDNTGYILTTPV----GQVLHTGD 176 Query: 176 FRFG---NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIEL 229 F+ + +D+ E + LI D A + G +S ++ +L+ + Sbjct: 177 FKLDEEPSDGQLSDLGRIEQAGKE---GVLLLISDSTNAERPGRTASEAEVARNLESLIA 233 Query: 230 INPKNAILT 238 +T Sbjct: 234 SCKGRVFMT 242 >gi|145630901|ref|ZP_01786678.1| DNA gyrase subunit A [Haemophilus influenzae R3021] gi|144983561|gb|EDJ91029.1| DNA gyrase subunit A [Haemophilus influenzae R3021] Length = 233 Score = 45.5 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHEDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|218295008|ref|ZP_03495844.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] gi|218244211|gb|EED10736.1| beta-lactamase domain protein [Thermus aquaticus Y51MC23] Length = 224 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 65/200 (32%), Gaps = 37/200 (18%) Query: 50 RGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIH---GIDGLRGYFLKQK 103 T +I+D TG L E + D +L TH H DH + G + Sbjct: 15 SDGQTRIIIDPFLTGNPMAAASLAE--VQADLILVTHAHGDHFGDSVALSKKGGVVVSTF 72 Query: 104 RPIDVYAAPDCMKHLFESFR--YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 I YA K + + Y F + +P D G V+E Sbjct: 73 E-IATYAEKHGAKSVPMNIGGTYRFAGGFVKWFPA---WHSSSFPDGTYGGMPMGVVVEL 128 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL- 220 H G+ A +D+ NLD ++ HF++ Sbjct: 129 AGKRIYHA---------GDTALFSDMALIGEL------NLDLALL------PIGDHFTMG 167 Query: 221 -SESLKKIELINPKNAILTH 239 ++L+ ++L+ PK + H Sbjct: 168 PEDALRALDLLKPKRVVPIH 187 >gi|15614961|ref|NP_243264.1| hypothetical protein BH2398 [Bacillus halodurans C-125] gi|10175018|dbj|BAB06117.1| BH2398 [Bacillus halodurans C-125] Length = 555 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++D G F L E + A+L TH H DHI G+ Y Sbjct: 30 DDDLFVIDAGLMFPDDEMLGVDVVIPDISYLVENEERVRAILLTHGHEDHIGGL----PY 85 Query: 99 FLKQKRPIDVYAAPDCM 115 L QK + VY + Sbjct: 86 VL-QKLNVPVYGTKLTL 101 >gi|320159695|ref|YP_004172919.1| hypothetical protein ANT_02850 [Anaerolinea thermophila UNI-1] gi|319993548|dbj|BAJ62319.1| hypothetical protein ANT_02850 [Anaerolinea thermophila UNI-1] Length = 465 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 60/203 (29%), Gaps = 43/203 (21%) Query: 52 SNTTVIVDTGPD--------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + V+++ G + +DAV+ +H H DH + L +KQ Sbjct: 22 NGARVLLECGLFQGRRADTYTRNRTFPFNPRRLDAVILSHAHIDHSGNLPNL----VKQG 77 Query: 104 RPIDVYAAPDCMK----------HLFES-FRYCFKALDDRTYPPIVNPIV-IENNDVPIC 151 +YA P + H+ E+ Y K R PPI + V Sbjct: 78 FEGPIYATPATAELAEIMVRDSAHIQEADAEYLNKKRLRRGEPPIEPLYTRADAEAVSPL 137 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN------------AFPAESLEKLQ 199 P H R G G+ D+ E L L+ Sbjct: 138 FVPVPYNQPFEPAPGVHARFVDAGHILGSAGVILDLEENGTRRRVWFSGDIGREKLPLLK 197 Query: 200 NL------DFLIIDALK-NGLHS 215 + D+L+++ + H Sbjct: 198 DPVLPENADYLLMECTYGDKPHR 220 >gi|296271692|ref|YP_003654323.1| RNA-metabolising metallo-beta-lactamase [Arcobacter nitrofigilis DSM 7299] gi|296095867|gb|ADG91817.1| RNA-metabolising metallo-beta-lactamase [Arcobacter nitrofigilis DSM 7299] Length = 644 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 26/146 (17%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S E +++ PDF +RE I AV+ TH H DHI + +L ++ Sbjct: 128 SFPDEDMHGVDILI---PDF--TYIREIKDKIAAVIITHGHEDHIGAMP-----YLFKEM 177 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +Y ++ + F K R Y + + G E + Sbjct: 178 QFPIYGTSLPLEMIGSKFD-EHKMRQHRGY----------FHAIQKRTPIKIGDFEIEWM 226 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAF 190 H I + ++A TD Sbjct: 227 HITHSIIDA-----SSLAITTDAGTI 247 >gi|227874505|ref|ZP_03992677.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus F0268] gi|227839649|gb|EEJ50107.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus F0268] Length = 662 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +T +IVD G F ++ ++ + + TH H DHI + Y Sbjct: 134 EDTMIIVDCGLAFPTDDMLGIDLVIPDISYIKSKIHKMKGFVITHGHEDHIGAL----PY 189 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 L Q+ + +YA + + Sbjct: 190 VL-QQINVPIYATKLTLALIQRK 211 >gi|78221944|ref|YP_383691.1| ribonuclease Z [Geobacter metallireducens GS-15] gi|78193199|gb|ABB30966.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 356 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ D G + +VL I + +H H DH G D + L +++ + +Y Sbjct: 26 ERRAILFDLGDITP--LPPRKVLRISDIFVSHTHVDHFIGFDRVVRLCLGREKRLRLYGP 83 Query: 112 PDCMKHLFES 121 P + Sbjct: 84 PGFTDQVAHR 93 >gi|261346347|ref|ZP_05973991.1| hydroxyacylglutathione hydrolase [Providencia rustigianii DSM 4541] gi|282565661|gb|EFB71196.1| hydroxyacylglutathione hydrolase [Providencia rustigianii DSM 4541] Length = 250 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 L+ L+ A+L TH H DH G+ + + I V+ + + Sbjct: 38 LKTNQLNPAAILLTHHHNDHTQGVKDIIAAYPN----IPVFGPQETLA 81 >gi|299140013|ref|ZP_07033183.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX8] gi|298598013|gb|EFI54181.1| RNA-metabolising metallo-beta-lactamase [Acidobacterium sp. MP5ACTX8] Length = 553 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 30/137 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D G F + L E + ++ TH H DHI G+ Sbjct: 25 RFGDDILVIDAGLMFPEEELLGVDIVVPDISYLIENRSMVRGIVLTHGHEDHIGGL---- 80 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + L + + VY + Y LD+ I I + Sbjct: 81 PWILSELN-VPVYGTEFTLA-------YVEGKLDEHRLLDDAELIEILPGK-----RFTL 127 Query: 157 GVIEAIPILQQHGRISS 173 G +PI H + Sbjct: 128 GPFSVMPIRVTHSLVDC 144 >gi|302874943|ref|YP_003843576.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] gi|307690439|ref|ZP_07632885.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] gi|302577800|gb|ADL51812.1| Hydroxyacylglutathione hydrolase [Clostridium cellulovorans 743B] Length = 199 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 14/93 (15%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T L I + +N VI+D G D L + + A+ TH H DH G+ Sbjct: 13 TNCYLVI----DESTNDAVIIDPGDDVNGLKHFLTSADVQLKAIFLTHGHMDHSLGMP-- 66 Query: 96 RGYFLKQKRPIDVYA---APDCMKHLFESFRYC 125 +L ++ + VY + M+ F Y Sbjct: 67 ---YLVEQYNLPVYLKKEDEELMRENAFIFGYI 96 >gi|306831785|ref|ZP_07464941.1| metallo-beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425983|gb|EFM29099.1| metallo-beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 211 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 20/134 (14%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID----AVLYTHPHADHIHGI 92 R + L + ++VD G D ++E++ S D A+L TH H DHI G+ Sbjct: 12 RENTYLLV------NDQGIIVVDPGSDVDH--IQEKIASFDKPVVAILITHAHYDHIMGL 63 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN---DVP 149 D +R F P VY + L+ S + F L+ P V E++ D Sbjct: 64 DVIRDAF---GHP-PVYISDKEASWLY-SPKDNFSGLERHADLPDVVLAPAEHHYQYDDD 118 Query: 150 ICMKSAGGVIEAIP 163 + + P Sbjct: 119 YQIAGFRFHVRQTP 132 >gi|261367048|ref|ZP_05979931.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282571168|gb|EFB76703.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 662 Score = 45.5 bits (107), Expect = 0.009, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 42/145 (28%), Gaps = 34/145 (23%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 ++VD G PDF + E I + TH H DHI + Sbjct: 131 ECQGDMILVDCGLVFPDADMFGVDLVIPDF--TYVLENKDKIKGLFITHGHEDHIGSLP- 187 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 +L +K + +YAA + + L++ I K Sbjct: 188 ----YLLKKFNVPIYAARLTIGLIKNK-------LEEHGLASSAIFHEIRPRQ-----KV 231 Query: 155 AGGVIEAIPILQQHGRISSLGFRFG 179 G PI H +L F Sbjct: 232 KLGCFTVEPIHVNHSIPDALAFAIE 256 >gi|326803511|ref|YP_004321329.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651108|gb|AEA01291.1| metallo-beta-lactamase domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 212 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Query: 50 RGSNTTVIVDTGP---DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +I+D G ++ + Q+ + AVL TH H DHI +D +R Y+ I Sbjct: 22 EQNKEALIIDPGSSAGRIRSEIQKLQLKPL-AVLITHGHCDHIGALDDIRQYY-----QI 75 Query: 107 DVYAAP 112 VY Sbjct: 76 PVYINQ 81 >gi|322514266|ref|ZP_08067327.1| hydroxyacylglutathione hydrolase [Actinobacillus ureae ATCC 25976] gi|322119878|gb|EFX91892.1| hydroxyacylglutathione hydrolase [Actinobacillus ureae ATCC 25976] Length = 235 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N +IVD + L + L++ A+L TH H DH +G+ L L I VY Sbjct: 21 DNDVIIVDPSDATPVLAFLAKNQLNLTAILLTHNHHDHTNGMPDL----LIHYPQIPVYG 76 Query: 111 APDCMK 116 + + Sbjct: 77 PQEVAQ 82 >gi|322421896|ref|YP_004201119.1| RNA-metabolising metallo-beta-lactamase [Geobacter sp. M18] gi|320128283|gb|ADW15843.1| RNA-metabolising metallo-beta-lactamase [Geobacter sp. M18] Length = 558 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 VIVD G F L E+ I A+L TH H DHI + Y Sbjct: 32 GEDIVIVDCGLMFPEPYMLGIDVVIPDIGYLLERADRIRAILLTHGHEDHIGAL----PY 87 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 L+ P +Y + + E Sbjct: 88 VLRDINP-PIYGTALTLGFVKEK 109 >gi|238062777|ref|ZP_04607486.1| ribonuclease Z [Micromonospora sp. ATCC 39149] gi|237884588|gb|EEP73416.1| ribonuclease Z [Micromonospora sp. ATCC 39149] Length = 308 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 76/246 (30%), Gaps = 58/246 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGL------------ 95 R + ++ D G Q+L V + D + TH H DH G+ G+ Sbjct: 26 RWDDEVILFDPGEGSQRQLLHTGVTATDLTRICVTHFHGDHCLGLPGIVQRLSLDRVPHP 85 Query: 96 ---------RGYFLKQKR-------------PIDV-----------YAAPDCMKHLFESF 122 YF + + PI V ++H E++ Sbjct: 86 VAVHFPAGGADYFARLRHASSFHETAELAVGPITVDGQRVTLRGGGTLEARRLRHPIETY 145 Query: 123 RYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNV 181 Y D R P + I V +++ + + + ++ G RF Sbjct: 146 GYRLVEPDGCRMLPERLAAHRIAGPAVGELLRAGHLDVGGRRVTRDEVSVTRPGQRF--- 202 Query: 182 AYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNA 235 A+ D ++ D L+I++ ++ H + ++ + + Sbjct: 203 AFVMDT-GLCDNVYALAEHADLLVIESTFLASEAALAAEVGHLTAGQAARVATESGVRTL 261 Query: 236 ILTHMH 241 +LTH Sbjct: 262 VLTHFS 267 >gi|237730520|ref|ZP_04561001.1| beta-lactamase domain-containing protein [Citrobacter sp. 30_2] gi|226906059|gb|EEH91977.1| beta-lactamase domain-containing protein [Citrobacter sp. 30_2] Length = 267 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 13/70 (18%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + TT++ DTGPD F + V + AV+ +H H DH G+ Sbjct: 28 SLLVQ-----DETTTILFDTGPDGSFMHNATQMGVDLTQLTAVVLSHGHYDHCGGVPWLA 82 Query: 93 DGLRGYFLKQ 102 D R Q Sbjct: 83 DNSRIICHPQ 92 >gi|215447003|ref|ZP_03433755.1| hypothetical protein MtubT_14107 [Mycobacterium tuberculosis T85] gi|289758879|ref|ZP_06518257.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis T85] gi|289714443|gb|EFD78455.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis T85] Length = 559 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 23/175 (13%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDMRH--VEDRLDDIEALVLTHGHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + LK + I V + + + E R Y R +P + + Sbjct: 91 --PFLLKLRPDIPVVGSKFTLALVAEKCREYRITPGVRRGPRGPEHPARRVECEYFVRQP 148 Query: 154 SAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + G I G +F + P S +D L+ D Sbjct: 149 FPLRTRGLSRCILGAGTILHTGDIKFDQLPPDGRPTDLPGMSRLGDTGVDLLLCD 203 >gi|253576178|ref|ZP_04853510.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251844521|gb|EES72537.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 309 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 52 SNTTVIVDTGPDFYMQV----LR-EQVLSIDAVLYTHPHADHIHGIDGLRG 97 S T+++D G + Q LR V +D V+ THP ADHI G+D + Sbjct: 80 SGHTMLIDAGNNDQEQAMLDYLRSYGVARLDVVIGTHPDADHIGGLDRVID 130 >gi|167750556|ref|ZP_02422683.1| hypothetical protein EUBSIR_01532 [Eubacterium siraeum DSM 15702] gi|167656482|gb|EDS00612.1| hypothetical protein EUBSIR_01532 [Eubacterium siraeum DSM 15702] Length = 341 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 38/220 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + T+++D + Y + ++D V+ THPH+DHI G+ + Sbjct: 13 SIFIELP----NTKTMLIDAAENEYADRITNYIYSCGYNTLDYVVATHPHSDHIGGMADV 68 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 G + I +P H +++ KA+DD + I I Sbjct: 69 IG-AFNVENVI---LSPAT--HTTKTYTNMLKAIDDSG-----AKVTIGVAGTEIFSDGD 117 Query: 156 GGVIEAIPILQQHGRIS--------SLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 + P+ + + ++ + G R + D ++ ++D D Sbjct: 118 LSAVVIAPVTEDYSDLNNSSVMVMLTYGSR--KFLFTGDAENGEENTIT--ADIDC---D 170 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAILT-HMHVDLDY 246 LK G H S S S + P+ A+++ M + Sbjct: 171 VLKVGHHGSSTSTSRAFLTAAS--PEYAVISCGMGNSYGH 208 >gi|125559879|gb|EAZ05327.1| hypothetical protein OsI_27531 [Oryza sativa Indica Group] Length = 663 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 40/133 (30%), Gaps = 25/133 (18%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DHI GI VYA+ + L + F LD + Sbjct: 27 FLTHAHRDHIAGITATNVAA--------VYASRLTI--LIAR--HIFPQLDR------AD 68 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL----GFRFGNVAYCTDVNAFPAESL 195 V P+ + G H + + G FG V + D P Sbjct: 69 AFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGDCRLTPD--F 126 Query: 196 EKLQNLDFLIIDA 208 L D++ +D Sbjct: 127 RFLA-ADYVFLDC 138 >gi|55377080|ref|YP_134930.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] gi|55229805|gb|AAV45224.1| mRNA 3'-end processing factor-like [Haloarcula marismortui ATCC 43049] Length = 638 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 17/114 (14%) Query: 52 SNTTVIVDTG-----------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +T +++D G D IDAV+ TH H DH L Sbjct: 203 PDTRILIDCGNKPGANGEQPYLDIPE-AFGAGTNGIDAVVLTHAHLDHSA----LVPLLF 257 Query: 101 KQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + +Y + + + A DD PP + +V E I ++ Sbjct: 258 EYGYDGPIYCTEPTRDLMGLLTLDHLDTAADDGRTPPYDSEMVREAIKHTIPLE 311 >gi|331092176|ref|ZP_08341006.1| hypothetical protein HMPREF9477_01649 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401948|gb|EGG81522.1| hypothetical protein HMPREF9477_01649 [Lachnospiraceae bacterium 2_1_46FAA] Length = 297 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 15/89 (16%) Query: 41 SLKISRVSERGSNTTVIVD-----TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I +++D TG + ++ + +D V+ TH H DHI GID + Sbjct: 55 SILIQ-----SGGKNMLIDGGTNATGGKVVEYLRKKGITYLDYVVGTHGHEDHIGGIDAV 109 Query: 96 RGYFLKQKR---PIDVYAAPDCMKHLFES 121 Y + P Y + + E+ Sbjct: 110 L-YNFEVGELFLPKQTYGT-HTYRDIRET 136 >gi|149204772|ref|ZP_01881735.1| beta-lactamase-like protein [Roseovarius sp. TM1035] gi|149141741|gb|EDM29794.1| beta-lactamase-like protein [Roseovarius sp. TM1035] Length = 537 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 53/203 (26%), Gaps = 46/203 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + + G ++VD G F L + ++A+ TH H D Sbjct: 3 AYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDISWLEARKGQLEAIFITHAHED 62 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + Y+ + PI A ++ + + P ++ Sbjct: 63 HVGAVAH---YYARLGAPIH--ARAFT-ANIARRKMQEHGNPEKAVHIASTWPATVKA-- 114 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN---------AFPAES 194 G + H S G G + + D F + Sbjct: 115 ---------GPFTVGFVPISHSIPESSGLVIDSAGGRIVHTGDFKIDVNPVVGEPFDRDL 165 Query: 195 LEKLQ--NLDFLIIDALKNGLHS 215 L + L+ D+ H Sbjct: 166 WASLSEPGVKALVCDSTNVFSHH 188 >gi|33862208|ref|NP_893769.1| hypothetical protein PMM1652 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33634426|emb|CAE20111.1| conserved hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 667 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 57/231 (24%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGI-DGLRGY 98 + +++D G F L+ + ++ TH H DHI GI L+ + Sbjct: 47 DDIILIDGGLAFPSDGMHGVNVVMPDTSYLQANLNRFRGMIVTHGHEDHIGGISHHLKKF 106 Query: 99 FLKQKRPIDVYAAPDCMKHLFESF----------------RYCFKALDDRTYPPIVNPIV 142 + +Y P + L R K + I N Sbjct: 107 NIPV-----IYGPPLAISMLKGKMEEAGVADRTTTQTIEPRQVVKLGQHFSLEFIRNTHS 161 Query: 143 IENN-----DVPICMKSAGGVIEA--IPILQQHGRISSLGFRF--GNVAYCTD-----VN 188 I ++ P+ + G + +P +H I + F G + +D V Sbjct: 162 IGDSFSLALTTPVGVVFFTGDFKFDHLPPDNKHADIERMAFYGEKGVLCLLSDSTNSEVK 221 Query: 189 AFPAESLEKLQNLDFLIIDA-----LKNGLHSSH---FSLSESLKKIELIN 231 F + NLD +I +A L S+H + ++K I Sbjct: 222 GFVPSEISVFPNLDRIISEAKGRVMLTTFASSTHRVAMVIQLAMKHGRKIG 272 >gi|119026314|ref|YP_910159.1| hypothetical protein BAD_1296 [Bifidobacterium adolescentis ATCC 15703] gi|118765898|dbj|BAF40077.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703] Length = 659 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 127 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVEALVLTHGHEDHIGGV----PYLL 180 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + +NP ++E K G Sbjct: 181 KLRPDIPLIGSKLTLAFVEAKCK-----------EHRINPTLVEVKGRD---KLKVGPFN 226 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L F D + L KL + +D L+ Sbjct: 227 LEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLM 286 Query: 206 ID 207 +D Sbjct: 287 MD 288 >gi|317471882|ref|ZP_07931217.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316900655|gb|EFV22634.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 648 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 31/131 (23%) Query: 53 NTTVIV-DTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++ D G F L+E I ++ TH H DHI I Sbjct: 124 NNNILIVDCGVAFPDDEMLGIDLVIPDVTYLKENAKKIKGLVITHGHEDHIGAIP----- 178 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +++++ I VYA M + L + V V+++ DV GV Sbjct: 179 YIEKQLNIPVYATKLTMGLIDNK-------LKEHGLLKQVKKTVVKHGDV-----IKLGV 226 Query: 159 IEAIPILQQHG 169 I H Sbjct: 227 FTVEFIKTNHS 237 >gi|307203591|gb|EFN82620.1| Probable cleavage and polyadenylation specificity factor subunit 2 [Harpegnathos saltator] Length = 685 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G DF ++ R V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDENFDQDFIKELKRH-VNQIDAVLLSYPDPLHLGALPYLVGKC---GLN 81 Query: 106 IDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F + IV + I MK Sbjct: 82 CPIYATIPVYK-MGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLI 205 G + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 141 GYGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLI 199 Query: 206 IDA 208 DA Sbjct: 200 TDA 202 >gi|307189918|gb|EFN74154.1| Probable cleavage and polyadenylation specificity factor subunit 2 [Camponotus floridanus] Length = 737 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G DF ++ R V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDENFDQDFIKELKRH-VNQIDAVLLSYPDPLHLGALPYLVGKC---GLN 81 Query: 106 IDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F + IV + I MK Sbjct: 82 CPIYATIPVYK-MGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLI 205 G + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 141 GYGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLI 199 Query: 206 IDA 208 DA Sbjct: 200 TDA 202 >gi|254551811|ref|ZP_05142258.1| hypothetical protein Mtube_15352 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 558 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDMRH--VEDRLDDIEALVLTHGHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + LK + I V + + + E R Y + P+ +E + + Sbjct: 91 --PFLLKLRPDIPVVGSKFTLALVAE---------KCREYR--ITPVFVEVRE---GQST 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 RHGVFECEYFAVNHSTPDALA 155 >gi|167747067|ref|ZP_02419194.1| hypothetical protein ANACAC_01779 [Anaerostipes caccae DSM 14662] gi|167654027|gb|EDR98156.1| hypothetical protein ANACAC_01779 [Anaerostipes caccae DSM 14662] Length = 663 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 31/131 (23%) Query: 53 NTTVIV-DTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++ D G F L+E I ++ TH H DHI I Sbjct: 139 NNNILIVDCGVAFPDDEMLGIDLVIPDVTYLKENAKKIKGLVITHGHEDHIGAIP----- 193 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +++++ I VYA M + L + V V+++ DV GV Sbjct: 194 YIEKQLNIPVYATKLTMGLIDNK-------LKEHGLLKQVKKTVVKHGDV-----IKLGV 241 Query: 159 IEAIPILQQHG 169 I H Sbjct: 242 FTVEFIKTNHS 252 >gi|154150423|ref|YP_001404041.1| beta-lactamase domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153998975|gb|ABS55398.1| beta-lactamase domain protein [Methanoregula boonei 6A8] Length = 322 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 24/126 (19%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLS------IDAVLYTHPHADHIHGIDGLRGYF 99 + G +++DTG +L V I+AV+ +H H DHI G+ L Sbjct: 67 TIHANGKEHRILLDTGLS-RGCMLHNAVQQKINLEGIEAVVISHGHFDHIGGLISLLQ-- 123 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + V PD L + P PI + D PI +K AG I Sbjct: 124 -RAGHQVPVVLHPD--AFLRRRLK-----------SPGKEPIELPGLD-PITLKQAGADI 168 Query: 160 EAIPIL 165 A P Sbjct: 169 LARPGP 174 >gi|15921107|ref|NP_376776.1| hypothetical protein ST0874 [Sulfolobus tokodaii str. 7] gi|15621892|dbj|BAB65885.1| 206aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 206 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 ++VDTG + L+ + + +++TH H DHI G +RG Sbjct: 19 DEGNILVDTGTPGSGKTLQNYLKDVKYIIFTHSHVDHIGGASEIRGLT 66 >gi|330838637|ref|YP_004413217.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] gi|329746401|gb|AEB99757.1| beta-lactamase domain protein [Selenomonas sputigena ATCC 35185] Length = 299 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 R ++ T+ +DTG P + +E + ++D ++ THPHADH+ G Sbjct: 55 RTADQTIFIDTGDLDEHPKLEAALKKENIKTVDKLIITHPHADHLGG 101 >gi|260887690|ref|ZP_05898953.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] gi|260862570|gb|EEX77070.1| metallo-beta-lactamase family protein [Selenomonas sputigena ATCC 35185] Length = 306 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 R ++ T+ +DTG P + +E + ++D ++ THPHADH+ G Sbjct: 62 RTADQTIFIDTGDLDEHPKLEAALKKENIKTVDKLIITHPHADHLGG 108 >gi|240276651|gb|EER40162.1| metallo-beta-lactamase domain-containing protein [Ajellomyces capsulatus H143] Length = 299 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIH 90 RT + I + ER +++DTG + L+ + +I VL TH H DH+ Sbjct: 38 RTNTY-LIGQCHER-----ILIDTGEGRPSWTENLKAALKNENATIKTVLLTHWHRDHVG 91 Query: 91 GIDGLRGYF 99 G+ L Sbjct: 92 GVPDLLKVC 100 >gi|238924255|ref|YP_002937771.1| putative hydrolase of the metallo-beta-lactamase superfamily [Eubacterium rectale ATCC 33656] gi|238875930|gb|ACR75637.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Eubacterium rectale ATCC 33656] Length = 557 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L+E + + TH H DHI I Y Sbjct: 33 EDSIIVVDCGLSFPEDDMLGIDLVIPDITYLKENIDKVKGFFITHGHEDHIGAI----PY 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 LK+ + +YA + + Sbjct: 89 VLKEIN-VPIYATKLTIGIIDRK 110 >gi|156381066|ref|XP_001632087.1| predicted protein [Nematostella vectensis] gi|156219138|gb|EDO40024.1| predicted protein [Nematostella vectensis] Length = 736 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 27/95 (28%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 + +G GASL P R SS +S +E +V++D G Sbjct: 415 FEVVFIGTGASL----------------PSKYRNVSSTLLSISNEH----SVLLDCGEGT 454 Query: 65 YMQVLREQ-------VLSIDAVLYTHPHADHIHGI 92 Q+ R + I V +H HADH I Sbjct: 455 LGQLYRHYGNKADDVIRRISCVFISHMHADHHLRI 489 >gi|302671601|ref|YP_003831561.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] gi|302396074|gb|ADL34979.1| metallo-beta-lactamase family protein [Butyrivibrio proteoclasticus B316] Length = 453 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 42/186 (22%) Query: 52 SNTTVIVDTGPDFY---------MQVLRE------QVLSIDAVLYTHPHADHIHGIDGLR 96 + +++D G D ++++ + DAVL+TH H DH+ Sbjct: 23 GDHRILIDLGADLPGTKNPALSDDELIKRVFAGEGDTIHTDAVLFTHYHGDHVG------ 76 Query: 97 GYFLKQKRP--IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L+ K P I +Y K + E+ L+ + + + N P Sbjct: 77 ---LRGKAPEGIPMY-IGGTAKEIMETIAMRVDLLNKKLCKNAPSQMETINRMEPYWKLG 132 Query: 155 A---GGVIEAIPILQQHGRISSLGFRFG----NVAYCTDV--NAFP-AESLEKL-----Q 199 + I+ P++ H I S F + Y D + P ++ E + Sbjct: 133 SSRDFSGIKVTPLVCDHSAIDSYMFVIELNGKKILYTGDFRDHGIPGQDTFESMIKRYVG 192 Query: 200 NLDFLI 205 +D L+ Sbjct: 193 KIDVLV 198 >gi|242398847|ref|YP_002994271.1| metal-dependent hydrolase [Thermococcus sibiricus MM 739] gi|242265240|gb|ACS89922.1| metal-dependent hydrolase [Thermococcus sibiricus MM 739] Length = 225 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 32/196 (16%) Query: 50 RGSNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR--- 104 G +++D + E ID +L TH H DHI D ++ + Sbjct: 15 EGEGKKILIDPFLSGNPTAAAKPEDFERIDLILVTHAHGDHIG--DSVKIAQRTGAKIVA 72 Query: 105 --PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I Y + Y +D + I + G ++E Sbjct: 73 MYDIASYLVEENQGITTVGMNYGPTEVDGVKLVQVPAWHSSSAGGYSIG-NACGYIMEFE 131 Query: 163 PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL-- 220 I H + + F ++ E +L +D ++ HF++ Sbjct: 132 GIKIYHAGDT---YVFKDM-----------ELFAELYGIDVALL------PIGGHFTMGP 171 Query: 221 SESLKKIELINPKNAI 236 E+ K +E + PK I Sbjct: 172 KEATKAVEFLRPKYVI 187 >gi|261367904|ref|ZP_05980787.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282570716|gb|EFB76251.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 540 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTGP----DFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + ++VD G D Y L + +A+L TH H DH I Y Sbjct: 15 SCTQLEAAGHRLLVDCGMEQGRDVYENADLPYAPGTYEALLLTHAHIDHSGQI----PYL 70 Query: 100 LKQKRPIDVYAAPDCMK 116 K +Y+ M Sbjct: 71 YKNGYRGPIYSTDATMD 87 >gi|213022666|ref|ZP_03337113.1| hypothetical protein Salmonelentericaenterica_08533 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 321 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPNIAR 95 >gi|153940274|ref|YP_001391856.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|170754816|ref|YP_001782174.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|152936170|gb|ABS41668.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. Langeland] gi|169120028|gb|ACA43864.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|295319881|gb|ADG00259.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum F str. 230613] Length = 569 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 44 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 99 Query: 100 LKQKRPIDVYAAPDCM 115 L+ + VY + Sbjct: 100 LRVVN-VPVYGTKLTL 114 >gi|91793376|ref|YP_563027.1| hydroxyacylglutathione hydrolase [Shewanella denitrificans OS217] gi|123166083|sp|Q12MM2|GLO2_SHEDO RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|91715378|gb|ABE55304.1| Hydroxyacylglutathione hydrolase [Shewanella denitrificans OS217] Length = 258 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 26/112 (23%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 + VL TH HADH+ GI GL+ ++ + + VY Sbjct: 48 LAGVLITHKHADHVGGIQGLQDFY---QNSLPVYGPKA-------------------EGI 85 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 + +I+ + +C+ +E IP+ + + + +C D Sbjct: 86 AGITHEIID--ERTLCLPHLEANVEIIPVPGH--TLGHHAYLIEDAIFCGDT 133 >gi|332028657|gb|EGI68691.1| Putative cleavage and polyadenylation specificity factor subunit 2 [Acromyrmex echinatior] Length = 737 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++D G DF ++ R V IDAVL ++P H+ + L G Sbjct: 26 DELRILLDCGWDENFDQDFIKELKRH-VHQIDAVLLSYPDPLHLGALPYLVGKC---GLN 81 Query: 106 IDVYAAPDCMKHLFESFRY----------CFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 +YA K + + F Y F + IV + I MK Sbjct: 82 CPIYATIPVYK-MGQMFMYDIYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGK 140 Query: 156 GGVIEAIPILQQH---GRISSLGFRFG--NVAYCTDVNAFPAE-----SLEKLQNLDFLI 205 G + P+ H G I + + G ++ Y D N LE+LQ LI Sbjct: 141 GYGVTLTPLPAGHMIGGTIWKI-VKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLI 199 Query: 206 IDA 208 DA Sbjct: 200 TDA 202 >gi|328949153|ref|YP_004366490.1| RNA-metabolising metallo-beta-lactamase [Treponema succinifaciens DSM 2489] gi|328449477|gb|AEB15193.1| RNA-metabolising metallo-beta-lactamase [Treponema succinifaciens DSM 2489] Length = 510 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGP--------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++++D G D + +++V+ TH H DH L +K Sbjct: 24 DGRSIMIDCGAFQGRRAESDKKNREFSFPADKVESVVLTHAHYDHCG----LLPVLMKNG 79 Query: 104 RPIDVYAAPDCMK 116 +YA P Sbjct: 80 YDGTIYATPATRD 92 >gi|295107897|emb|CBL21850.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Ruminococcus obeum A2-162] Length = 539 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + +VD G PD+Y Q + + +D VL TH H DH + Sbjct: 15 SCYYLEAAGKKFLVDCGMEQGPDYYENQEIPVKGSDLDFVLLTHAHMDHSGNL----PAI 70 Query: 100 LKQKRPIDVYAAPDCMK 116 + VYA Sbjct: 71 YAKGFQGPVYATQATCH 87 >gi|300361477|ref|ZP_07057654.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] gi|300354096|gb|EFJ69967.1| metallo-beta-lactamase superfamily protein [Lactobacillus gasseri JV-V03] Length = 559 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 49/150 (32%), Gaps = 33/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 33 IIMDCGIKFPEDDMMGINYVISDYSYLIKNRKKIKALVVTHGHEDHIGGI----PYLLKK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 I VYA P + + LD+ I+N + +K + Sbjct: 89 IPEIPVYATPFALALIR-------GKLDEHG---ILNSSELHEEHEDTVLKFDKLSVSF- 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG G V + D Sbjct: 138 -FRTTHSIPDTLGIAVHTPEGAVVFTGDFK 166 >gi|239616718|ref|YP_002940040.1| hypothetical protein Kole_0311 [Kosmotoga olearia TBF 19.5.1] gi|239505549|gb|ACR79036.1| conserved hypothetical protein [Kosmotoga olearia TBF 19.5.1] Length = 283 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 72/244 (29%), Gaps = 74/244 (30%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI------------DGLRG--YFL 100 V+ D G +L V +I V TH H DHI G+ D + Sbjct: 21 RVLFDAGEGI-STILGNSVYAIKEVFITHGHVDHIAGLWGLINTRNNAMGDREKALKINY 79 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 +K A D ++ + E Y I+NP IE + + Sbjct: 80 PKKNR----AIEDFLRFITEMNPKL-------RYEMILNP--IEPGEEVYLRTAGNFRRS 126 Query: 161 AIPILQQH-GRISSLGF-------------------RFGNVA-----------Y------ 183 IP QH S G+ ++ Y Sbjct: 127 VIPFPVQHTSGEISYGYHVLEERRKLKPEFSHLSPQEISDLVKEKGRDFVTQTYKKKILT 186 Query: 184 -CTDVNAFPAESLEKLQNLDFLIIDALK----NGLHSSHFSLSESLKKIELIN-PKNAIL 237 D NA P + ++ + LI + + +H LSE L + + K IL Sbjct: 187 VSGDCNALP---VSVIKGSETLIHECTFINGGDRRGQNHAVLSEILDNVREASDIKRLIL 243 Query: 238 THMH 241 H+ Sbjct: 244 YHIS 247 >gi|70606450|ref|YP_255320.1| metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] gi|68567098|gb|AAY80027.1| hypothetical metallo-beta-lactamase superfamily protein [Sulfolobus acidocaldarius DSM 639] Length = 631 Score = 45.1 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 19/88 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RS++ + + +++D G + + + + ++ IDAV+ TH H DH Sbjct: 189 RSAVLVETPESK-----ILLDVGLNPSVSYGEKLFPRIDIDQVKLEDIDAVVITHAHLDH 243 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + K VY P Sbjct: 244 CG----MVPLLFKYGYEGPVYMTPPTRD 267 >gi|257438703|ref|ZP_05614458.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] gi|257198838|gb|EEU97122.1| metallo-beta-lactamase family protein [Faecalibacterium prausnitzii A2-165] Length = 600 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + +IVD G F + + I +L TH H DHI I Sbjct: 71 ECNGDMIIVDCGLVFPDSEMYGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGSIP--- 127 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +L QK + +Y + L++ + I K Sbjct: 128 --YLLQKFDLPIYGTRLTCGLIRNK-------LEEFGLAGKTKFVEITPKQ-----KIKL 173 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA 182 G PI H S+ F + A Sbjct: 174 GCFTVEPIHVNHSIPDSVAFAIDSPA 199 >gi|159030402|emb|CAO91298.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 546 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 15/170 (8%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +++D G + + + +D V +H H+DHI G+ L + + VYA+ Sbjct: 39 RILLDCGLADLKPLTQNKKPPVDLVFCSHAHSDHIRGLMAL----HQTYPQLPVYASEVT 94 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 ++ L + + + I D G + ++ + Sbjct: 95 VQLLPLQWPDSAEEIGSFCQ-GWPWRSPITLFDDLTVEIFPAGHLPGAAVVLFTYKTPK- 152 Query: 175 GFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALKNGLHSSH 217 R V Y D + S++ L+ + D LII+ H Sbjct: 153 --RTYKVLYTGDFSLSNFQLVEGLSIDLLRGISPDVLIIEGSYGTERHPH 200 >gi|159904583|ref|YP_001548245.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159886076|gb|ABX01013.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 635 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 37/201 (18%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYT 82 R+S + + + + ++VD G + ++ + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPI 141 H H DH + VY + Y + P + Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKNVPY-SSK 295 Query: 142 VIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTDV--- 187 I+N G + P ++ H LG NVAY D+ Sbjct: 296 DIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYNVAYTGDIKFE 355 Query: 188 -NAFPAESLEKLQNLDFLIID 207 + ++ + L+ LII+ Sbjct: 356 ASRLLEPAVCQFPRLETLIIE 376 >gi|15609889|ref|NP_217268.1| hypothetical protein Rv2752c [Mycobacterium tuberculosis H37Rv] gi|15842290|ref|NP_337327.1| hypothetical protein MT2822 [Mycobacterium tuberculosis CDC1551] gi|31793926|ref|NP_856419.1| hypothetical protein Mb2773c [Mycobacterium bovis AF2122/97] gi|121638630|ref|YP_978854.1| hypothetical protein BCG_2768c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662594|ref|YP_001284117.1| hypothetical protein MRA_2777 [Mycobacterium tuberculosis H37Ra] gi|148823940|ref|YP_001288694.1| hypothetical protein TBFG_12765 [Mycobacterium tuberculosis F11] gi|167968578|ref|ZP_02550855.1| hypothetical protein MtubH3_11293 [Mycobacterium tuberculosis H37Ra] gi|215404720|ref|ZP_03416901.1| hypothetical protein Mtub0_13738 [Mycobacterium tuberculosis 02_1987] gi|215412566|ref|ZP_03421294.1| hypothetical protein Mtub9_14460 [Mycobacterium tuberculosis 94_M4241A] gi|215428183|ref|ZP_03426102.1| hypothetical protein MtubT9_18033 [Mycobacterium tuberculosis T92] gi|215431692|ref|ZP_03429611.1| hypothetical protein MtubE_13696 [Mycobacterium tuberculosis EAS054] gi|218754492|ref|ZP_03533288.1| hypothetical protein MtubG1_14129 [Mycobacterium tuberculosis GM 1503] gi|219558760|ref|ZP_03537836.1| hypothetical protein MtubT1_16217 [Mycobacterium tuberculosis T17] gi|224991122|ref|YP_002645811.1| hypothetical protein JTY_2762 [Mycobacterium bovis BCG str. Tokyo 172] gi|254232850|ref|ZP_04926177.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365403|ref|ZP_04981448.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|260187769|ref|ZP_05765243.1| hypothetical protein MtubCP_17299 [Mycobacterium tuberculosis CPHL_A] gi|260201880|ref|ZP_05769371.1| hypothetical protein MtubT4_17740 [Mycobacterium tuberculosis T46] gi|260206063|ref|ZP_05773554.1| hypothetical protein MtubK8_17375 [Mycobacterium tuberculosis K85] gi|289444296|ref|ZP_06434040.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289448408|ref|ZP_06438152.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289570930|ref|ZP_06451157.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575449|ref|ZP_06455676.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289746555|ref|ZP_06505933.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis 02_1987] gi|289751409|ref|ZP_06510787.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289754857|ref|ZP_06514235.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289762924|ref|ZP_06522302.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994155|ref|ZP_06799846.1| hypothetical protein Mtub2_06483 [Mycobacterium tuberculosis 210] gi|298526219|ref|ZP_07013628.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777033|ref|ZP_07415370.1| hypothetical protein TMAG_03137 [Mycobacterium tuberculosis SUMu001] gi|306780936|ref|ZP_07419273.1| hypothetical protein TMBG_02889 [Mycobacterium tuberculosis SUMu002] gi|306785562|ref|ZP_07423884.1| hypothetical protein TMCG_01997 [Mycobacterium tuberculosis SUMu003] gi|306790158|ref|ZP_07428480.1| hypothetical protein TMDG_00464 [Mycobacterium tuberculosis SUMu004] gi|306794241|ref|ZP_07432543.1| hypothetical protein TMEG_03428 [Mycobacterium tuberculosis SUMu005] gi|306798659|ref|ZP_07436961.1| hypothetical protein TMFG_03648 [Mycobacterium tuberculosis SUMu006] gi|306804515|ref|ZP_07441183.1| hypothetical protein TMHG_01951 [Mycobacterium tuberculosis SUMu008] gi|306807445|ref|ZP_07444113.1| hypothetical protein TMGG_02118 [Mycobacterium tuberculosis SUMu007] gi|306968815|ref|ZP_07481476.1| hypothetical protein TMIG_02251 [Mycobacterium tuberculosis SUMu009] gi|306973148|ref|ZP_07485809.1| hypothetical protein TMJG_01735 [Mycobacterium tuberculosis SUMu010] gi|307080857|ref|ZP_07490027.1| hypothetical protein TMKG_03182 [Mycobacterium tuberculosis SUMu011] gi|307085448|ref|ZP_07494561.1| hypothetical protein TMLG_02465 [Mycobacterium tuberculosis SUMu012] gi|81669105|sp|O33294|Y2752_MYCTU RecName: Full=Putative ribonuclease J Rv2752c; Short=RNase J gi|2624274|emb|CAA15548.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|13882584|gb|AAK47141.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis CDC1551] gi|31619520|emb|CAD94958.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121494278|emb|CAL72756.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124601909|gb|EAY60919.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134150916|gb|EBA42961.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148506746|gb|ABQ74555.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra] gi|148722467|gb|ABR07092.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224774237|dbj|BAH27043.1| hypothetical protein JTY_2762 [Mycobacterium bovis BCG str. Tokyo 172] gi|289417215|gb|EFD14455.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289421366|gb|EFD18567.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289539880|gb|EFD44458.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289544684|gb|EFD48332.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289687083|gb|EFD54571.1| metallo-beta-lactamase superfamily protein [Mycobacterium tuberculosis 02_1987] gi|289691996|gb|EFD59425.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695444|gb|EFD62873.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710430|gb|EFD74446.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|298496013|gb|EFI31307.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214545|gb|EFO73944.1| hypothetical protein TMAG_03137 [Mycobacterium tuberculosis SUMu001] gi|308326193|gb|EFP15044.1| hypothetical protein TMBG_02889 [Mycobacterium tuberculosis SUMu002] gi|308329747|gb|EFP18598.1| hypothetical protein TMCG_01997 [Mycobacterium tuberculosis SUMu003] gi|308333354|gb|EFP22205.1| hypothetical protein TMDG_00464 [Mycobacterium tuberculosis SUMu004] gi|308337378|gb|EFP26229.1| hypothetical protein TMEG_03428 [Mycobacterium tuberculosis SUMu005] gi|308341041|gb|EFP29892.1| hypothetical protein TMFG_03648 [Mycobacterium tuberculosis SUMu006] gi|308346174|gb|EFP35025.1| hypothetical protein TMGG_02118 [Mycobacterium tuberculosis SUMu007] gi|308348846|gb|EFP37697.1| hypothetical protein TMHG_01951 [Mycobacterium tuberculosis SUMu008] gi|308353567|gb|EFP42418.1| hypothetical protein TMIG_02251 [Mycobacterium tuberculosis SUMu009] gi|308357410|gb|EFP46261.1| hypothetical protein TMJG_01735 [Mycobacterium tuberculosis SUMu010] gi|308361363|gb|EFP50214.1| hypothetical protein TMKG_03182 [Mycobacterium tuberculosis SUMu011] gi|308364972|gb|EFP53823.1| hypothetical protein TMLG_02465 [Mycobacterium tuberculosis SUMu012] gi|323718600|gb|EGB27764.1| hypothetical protein TMMG_02760 [Mycobacterium tuberculosis CDC1551A] gi|326904367|gb|EGE51300.1| hydrolase [Mycobacterium tuberculosis W-148] Length = 558 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 35/141 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDMRH--VEDRLDDIEALVLTHGHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + LK + I V + + + E R Y + P+ +E + + Sbjct: 91 --PFLLKLRPDIPVVGSKFTLALVAE---------KCREYR--ITPVFVEVRE---GQST 134 Query: 155 AGGVIEAIPILQQHGRISSLG 175 GV E H +L Sbjct: 135 RHGVFECEYFAVNHSTPDALA 155 >gi|307730499|ref|YP_003907723.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1003] gi|307585034|gb|ADN58432.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1003] Length = 263 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 50 RGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 V+VD G ++ L ++ + A+L TH H DH+ G+ L + + V Sbjct: 21 SDGRHAVVVDPGEAAPVRAYLAKRGWRLSAILLTHHHQDHVGGVADLL-----NGQAVPV 75 Query: 109 YAAP-DCMKHLFES 121 Y + ++H+ + Sbjct: 76 YGPAGEAIEHVTQR 89 >gi|254556976|ref|YP_003063393.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] gi|254045903|gb|ACT62696.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum JDM1] Length = 558 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L I A++ TH H DHI GI + LKQ Sbjct: 36 ILIDAGIKFPEDELLGIDYVIPDYSYLVANQQKIKALVITHGHEDHIGGI----PFLLKQ 91 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + + Sbjct: 92 IN-VPIYAGPLALALIK 107 >gi|229917548|ref|YP_002886194.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] gi|229468977|gb|ACQ70749.1| beta-lactamase domain protein [Exiguobacterium sp. AT1b] Length = 285 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 14/81 (17%) Query: 51 GSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G T+++D G F Q+ ++ + + V TH H DHI G+ L G K Sbjct: 30 GDTHTLLIDAGNSVSHASFFLEQLEKQGLRAPSMVALTHWHWDHIFGLPALEG-----KV 84 Query: 105 PIDVYAAPDCMKHLFESFRYC 125 I A+ + + + Y Sbjct: 85 SI---ASEATKQGMEKLVPYA 102 >gi|34496709|ref|NP_900924.1| hydroxyacylglutathione hydrolase [Chromobacterium violaceum ATCC 12472] gi|34102564|gb|AAQ58929.1| hydroxyacylglutathione hydrolase [Chromobacterium violaceum ATCC 12472] Length = 260 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R V VD G + +EQ+ ++AVL TH HADH G+ L+ I Sbjct: 27 REGARAVAVDPGEAAPLLRHLEQEQLR-LEAVLITHHHADHCGGLAD----VLRAWPGIP 81 Query: 108 VYAAP 112 VY Sbjct: 82 VYGPA 86 >gi|160940884|ref|ZP_02088224.1| hypothetical protein CLOBOL_05776 [Clostridium bolteae ATCC BAA-613] gi|158436128|gb|EDP13895.1| hypothetical protein CLOBOL_05776 [Clostridium bolteae ATCC BAA-613] Length = 735 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F + L++ + + + TH H DHI + Sbjct: 211 EDSIIVVDCGLAFPGDDMLGIDLVIPDVTYLKQNIDKVKGFVITHGHEDHIGALP----- 265 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 ++ Q+ + VY + + Sbjct: 266 YILQQVNVPVYGTKLTIALIEHK 288 >gi|158521881|ref|YP_001529751.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510707|gb|ABW67674.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 591 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 18/87 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ--VLREQVLSIDA-----VLYTHPHADHIHGID 93 S+ I G + +IVDT + Q ++ + I A ++YTH H DHI G D Sbjct: 71 SIMIE-----GDDGLIIVDT-METREQARLVLAEFRKISAKPVKAIIYTHNHTDHIFGAD 124 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 VYA + Sbjct: 125 -----VFAGGGSPAVYAHQTTHDLVNR 146 >gi|310641611|ref|YP_003946369.1| beta-lactamase domain protein [Paenibacillus polymyxa SC2] gi|309246561|gb|ADO56128.1| Beta-lactamase domain protein [Paenibacillus polymyxa SC2] Length = 559 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V+VD+G F + L E + ++ TH H DHI G+ Y Sbjct: 31 GNDIVVVDSGLKFPEEDMLGIDIVIPDISYLTENRDKVRGIVLTHGHEDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCM 115 LK + VY + Sbjct: 87 VLKHLN-VPVYGTKLTL 102 >gi|146163951|ref|XP_001012725.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila] gi|146145850|gb|EAR92480.2| metallo beta lactamase domain containing protein [Tetrahymena thermophila SB210] Length = 750 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 53/191 (27%), Gaps = 30/191 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + T++ D G + ID + TH H DH Sbjct: 14 RSCIILEYKG-----KTIMFDCGLHMGKNGHASLPYFDNIKPDQIDIIFITHFHLDHCAA 68 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF--KALDDRTYPPIVNPIVIE-NNDV 148 + + VYA R K+ + + Y +E N + Sbjct: 69 LPYFIAKTDFDGKKQKVYATSPTRAIYRHVLRDSLTDKSENIKLYTADDIEKSMEVINVI 128 Query: 149 PICMKSAGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNA-----FPAESLEK 197 + I+ H + G R V Y D + P + Sbjct: 129 DFYEEMEHENIKFKCYPAGHVLGAAMFLVEIDGVR---VLYTGDYSTEKDILIPPAQIPN 185 Query: 198 LQNLDFLIIDA 208 + +D LI++ Sbjct: 186 -EKVDVLIVEG 195 >gi|150403634|ref|YP_001330928.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150034664|gb|ABR66777.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 635 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 37/201 (18%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDFYMQVLRE---------QVLSIDAVLYT 82 R+S + + + + ++VD G + ++ + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPI 141 H H DH + VY + Y + P + Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKNVPY-SSK 295 Query: 142 VIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTDV--- 187 I+N G + P ++ H LG NVAY D+ Sbjct: 296 DIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGDGLYNVAYTGDIKFE 355 Query: 188 -NAFPAESLEKLQNLDFLIID 207 + ++ + L+ LII+ Sbjct: 356 ASRLLEPAVCQFPRLETLIIE 376 >gi|146311539|ref|YP_001176613.1| beta-lactamase domain-containing protein [Enterobacter sp. 638] gi|145318415|gb|ABP60562.1| beta-lactamase domain protein [Enterobacter sp. 638] Length = 279 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 19/85 (22%) Query: 20 RITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV---LREQV--- 73 I G +P + + I+ RG ++VD G + L + Sbjct: 40 VIQCRAGVSEPGD---------IHINCYLIRGLGRIILVDAGTGPLNNMAGQLNANLAAA 90 Query: 74 ----LSIDAVLYTHPHADHIHGIDG 94 +D VL TH H DHI G+ Sbjct: 91 GVSPDDVDTVLLTHCHPDHIGGLLD 115 >gi|118431818|ref|NP_148520.2| hypothetical protein APE_2295.1 [Aeropyrum pernix K1] gi|116063140|dbj|BAA81307.2| conserved hypothetical protein [Aeropyrum pernix K1] Length = 326 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 21/134 (15%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 + TH H DH+ G+ + + + A P + L + + R P Sbjct: 32 IVTHAHEDHMKGLS------RSVRESLLIIATPYTFRFLEVLGKRV--PPERRVELPYGA 83 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 + + V + + + HGR Y +D P LQ Sbjct: 84 SLDFDGERVTLVKARHIAGSAQVLVETGHGR----------FGYTSDFK-MPGT--PPLQ 130 Query: 200 NLDFLIIDALKNGL 213 +LD L++DA Sbjct: 131 DLDILVVDATYGSP 144 >gi|328771786|gb|EGF81825.1| hypothetical protein BATDEDRAFT_86882 [Batrachochytrium dendrobatidis JAM81] Length = 303 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%) Query: 52 SNTTVIVDTGPDF--YMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++DTG Y Q+L V SI +L TH H DHI GI ++ Sbjct: 45 GSRRILLDTGEGVSGYQQLLLNTLQAAGVTSISHILCTHRHHDHIGGISQVQTVV 99 >gi|327351713|gb|EGE80570.1| tRNA processing endoribonuclease Trz1 [Ajellomyces dermatitidis ATCC 18188] Length = 1162 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 19/105 (18%) Query: 162 IPILQQHGRISSL-----GFRFGNVAYCTDVNAFPAESLEKLQNLDFLII--------DA 208 +P++ HG +++ GF+ V+Y D P+ ++ D ++ D Sbjct: 830 VPVMHCHGAMATSFVFPSGFK---VSYSGDCR--PSREFARI-GADSTVLIHEATFEDDM 883 Query: 209 LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKST 253 L++ H + E+L+ E + +N ILTH + + Sbjct: 884 LRDAKAKRHSTCGEALRVAERMRARNVILTHFSQRYAHKPTVPRL 928 Score = 42.8 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 28/94 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P RT S+ + + D G + Sbjct: 631 EIITLGTGSSL----------------PSKYRTVSATLLRVPG----VGNYLFDCGENTL 670 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG 91 Q+ LRE + + + +H HADH G Sbjct: 671 GQLQRAFSPEELREVLRDLKVIWISHLHADHHLG 704 >gi|308068715|ref|YP_003870320.1| hypothetical protein PPE_01946 [Paenibacillus polymyxa E681] gi|305857994|gb|ADM69782.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 559 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V+VD+G F + L E + ++ TH H DHI G+ Y Sbjct: 31 GNDIVVVDSGLKFPEEDMLGIDIVIPDISYLTENRDKVRGIVLTHGHEDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCM 115 LK + VY + Sbjct: 87 VLKHLN-VPVYGTKLTL 102 >gi|260806400|ref|XP_002598072.1| hypothetical protein BRAFLDRAFT_124299 [Branchiostoma floridae] gi|229283343|gb|EEN54084.1| hypothetical protein BRAFLDRAFT_124299 [Branchiostoma floridae] Length = 409 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 23/91 (25%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 T LG + C P + +S + + + D G Sbjct: 2 SMDLTFLGTAS-------------CYPMPNRG--------VSCIVFKSDRQCWMFDCGEG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGI 92 QV++ + I+ + TH H DH+ G+ Sbjct: 41 SQTQVMKSSIKAAKINKIFITHLHGDHLFGL 71 Score = 36.3 bits (83), Expect = 4.4, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 35/122 (28%), Gaps = 19/122 (15%) Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHG----RISSLGFRFGNV--------AYCT 185 ++P E + A + E + + G RI GF Sbjct: 240 LHPGEGEGRTIRRDETGAWHLFEDSRFVVKAGAIYHRIPCFGFVIQEKTLPGNSFPVILG 299 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTH 239 D + + Q D L+ +A S H + + + I K ILTH Sbjct: 300 DTHDPSPLT-SLAQGADVLVHEATLENSMRSKAIEVGHSTPEMAATFAKTIGAKTLILTH 358 Query: 240 MH 241 Sbjct: 359 FS 360 >gi|154488210|ref|ZP_02029327.1| hypothetical protein BIFADO_01784 [Bifidobacterium adolescentis L2-32] gi|154083361|gb|EDN82406.1| hypothetical protein BIFADO_01784 [Bifidobacterium adolescentis L2-32] Length = 659 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 50/182 (27%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 127 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVEALVLTHGHEDHIGGV----PYLL 180 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K + I + + + + + +NP ++E K G Sbjct: 181 KLRPDIPLIGSKLTLAFVEAKCK-----------EHRINPTLVEVKGRD---KLKVGPFN 226 Query: 161 AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLE------------KL--QNLDFLI 205 + H +L F D + L KL + +D L+ Sbjct: 227 LEFVNVTHSIPDALAVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLM 286 Query: 206 ID 207 +D Sbjct: 287 MD 288 >gi|146296168|ref|YP_001179939.1| beta-lactamase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409744|gb|ABP66748.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 279 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 14/58 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI------DAVLYTHPHADHIHGI 92 S+ I + ++ D G + + + + DA++ +H H DHI G+ Sbjct: 40 SILIEK-----DEKRILFDCGQT---NAIVKNIEKMGVDFDFDAIVLSHAHYDHIGGL 89 >gi|145629335|ref|ZP_01785134.1| DNA gyrase subunit A [Haemophilus influenzae 22.1-21] gi|145638839|ref|ZP_01794447.1| DNA gyrase subunit A [Haemophilus influenzae PittII] gi|144978838|gb|EDJ88561.1| DNA gyrase subunit A [Haemophilus influenzae 22.1-21] gi|145271811|gb|EDK11720.1| DNA gyrase subunit A [Haemophilus influenzae PittII] gi|309750823|gb|ADO80807.1| Glyoxalase II [Haemophilus influenzae R2866] Length = 238 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|325106516|ref|YP_004276170.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] gi|324975364|gb|ADY54348.1| beta-lactamase domain protein [Pedobacter saltans DSM 12145] Length = 268 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 56/197 (28%), Gaps = 51/197 (25%) Query: 56 VIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G + + L I AV +H H DHI GI +K I VY Sbjct: 26 ILIDIGLSCKELEIRLARLNLYTSKIKAVFISHEHTDHIKGIK-----TFSKKHKIPVY- 79 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 L + N + N G + + H Sbjct: 80 --FTFATLANT-----------------NLQLENINYFDAENPIRVGSLRITAFEKHHDA 120 Query: 171 ISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS----- 215 F + + TD+ + + D +++ L+N + Sbjct: 121 AHPHSFIIEDNDLCIGVFTDLGIVCNNLVRYFKMCDAAFLESNYCEEMLRNSRYPYFLKR 180 Query: 216 ------SHFSLSESLKK 226 H S +++L+ Sbjct: 181 RISGGKGHLSNTQALEL 197 >gi|300123263|emb|CBK24536.2| unnamed protein product [Blastocystis hominis] Length = 403 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 43/150 (28%), Gaps = 48/150 (32%) Query: 1 MKDYYHFTILGCGA--SLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN-TTVI 57 M LG G+ S V R++ I G + Sbjct: 1 MALTLKLQFLGTGSQKSTIV--------------------RATQSIVVTIRNGLKAGEWL 40 Query: 58 VDTGPDFYMQVLR-----------EQVL-------SIDAVLYTHPHADHIHGIDGL---R 96 D G Q+ R E++ I + TH H DHI+G+ Sbjct: 41 FDCGDITTHQMYRLQREMKSSLSGERIRNLIIRPSRISTIFITHMHGDHIYGLPAFLSDA 100 Query: 97 GYFLKQKR----PIDVYAAPDCMKHLFESF 122 G Q P+++Y K+L F Sbjct: 101 GISRTQNNQTYAPVEIYGPYGLAKYLKTVF 130 >gi|242309136|ref|ZP_04808291.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524177|gb|EEQ64043.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 658 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 25/158 (15%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N+ +I+D G F L I ++ TH H DHI + + Sbjct: 132 NSAIIIDAGMSFPDGDMHGIDILVPDFSYLEVIKDKIAGIVITHAHEDHIGAMP-----Y 186 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP---ICMKSAG 156 L +K +Y P + + F + + I + I + + Sbjct: 187 LFKKYQFPIYGTPLPLGLIGSKFDEHGLKKYRSLFRAVEKRKPIRIGEFEIEWIHITHSI 246 Query: 157 GVIEAIPILQQHGRISSLG-FRFGNV---AYCTDVNAF 190 A+ I + G I G F+ + Y TD+N Sbjct: 247 VDSSALAIKTEAGVIFHTGDFKIDHTPIDGYPTDLNRI 284 >gi|308805462|ref|XP_003080043.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] gi|116058502|emb|CAL53691.1| Predicted hydrolase involved in interstrand cross-link repair (ISS) [Ostreococcus tauri] Length = 517 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 23/174 (13%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD--D 131 +I A TH HADH+ G+ R I Y + L + + + + Sbjct: 30 RNIRAYFLTHAHADHVVGLGARRWSPETLGARI--YCDEITREILVSKWPTLGRHVKALE 87 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVNAF 190 R V +V + + + +GR+ G FR + Sbjct: 88 RNRGHGVRLTRETTIEVTLIDAGHCPGSVVVCVEGPNGRLVHTGDFRREDW--------I 139 Query: 191 PAESLEKLQ---NLDFLIIDALKNGLHSSHF--SLSESLKKIELI---NPKNAI 236 E+L + +D+L +D H H +E+ + I NP AI Sbjct: 140 AREALPRAMTRAPVDYLFLD--NTYCHPKHAFPGRAEATEDIVRFCVSNPGRAI 191 >gi|326799591|ref|YP_004317410.1| beta-lactamase [Sphingobacterium sp. 21] gi|326550355|gb|ADZ78740.1| beta-lactamase domain protein [Sphingobacterium sp. 21] Length = 278 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVLREQVLSID-----AVLYTHPHADHIHGIDGLRG 97 I + E G V+VDTG P +++ D A++ TH H DH+ + L Sbjct: 38 IVMIGEVGKKEWVLVDTGMPKCADEMIAVAQSRFDDHPPVAIVLTHGHFDHVGNVVDL-- 95 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYC 125 L + V+A P F Y Sbjct: 96 --LTHWPDVPVFAHP-------LEFPYL 114 >gi|319937372|ref|ZP_08011779.1| hypothetical protein HMPREF9488_02614 [Coprobacillus sp. 29_1] gi|319807738|gb|EFW04331.1| hypothetical protein HMPREF9488_02614 [Coprobacillus sp. 29_1] Length = 203 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 42/193 (21%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V +++D G + + + E L + A+L TH H DH+ +D Sbjct: 15 YVVYNSEKECIVIDPGANGQKVAKFIDENELFLKAILLTHGHFDHVGAVD---------- 64 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 Y + Y + ++ + + + +++ P Sbjct: 65 --------------------YLYSKYKCSIYTHKESIELMRDAQLNLSFYEKSFTVDS-P 103 Query: 164 ILQQHGRISSLGFRFGNV---AYC--TDVNAFPAESLEKLQNLDFLIIDALKNG--LHSS 216 I + H ++ G+ + +C + + P+E+ + D L ++ SS Sbjct: 104 IQEAHDKMVLAGYEIRWLLLEGHCQGSSMIYIPSEN-ALMSG-DVLFAGSIGRYDFPTSS 161 Query: 217 HFSLSESLKKIEL 229 H +SL++I+ Sbjct: 162 HLQTKKSLEQIKE 174 >gi|198436032|ref|XP_002127206.1| PREDICTED: similar to lactamase, beta 2 [Ciona intestinalis] Length = 282 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 52 SNTTVIVDTG-PDF------YMQVLREQVLSIDAVLYTHPHADHIHGI 92 ++DTG PD L E +SI A++ TH H DH+ GI Sbjct: 39 GPKRFLIDTGSPDVPEYVQSLQSTLNENNISIQAIILTHWHHDHVGGI 86 >gi|222055777|ref|YP_002538139.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221565066|gb|ACM21038.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 251 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 26/230 (11%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLK-QKRPIDVYA 110 + ++++D G + + +I + TH H DHI GI L +K + + ++ Sbjct: 24 DDSLLLDAG-TIGAVLSEHEQWAIARIFITHAHLDHIRGIPMLADNIVIKELNKSLTIHG 82 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + ++ L D P VI N + ++ G + + + H Sbjct: 83 IRETIESLSTHLLNDVIWPDFSKIPS--THPVIRYNPIVPEVELEVGGYKIMAVEVNH-T 139 Query: 171 ISSLGF--RFGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKN---------GLHSSH 217 + ++G+ R GN + Y D + N+ LI++ H + Sbjct: 140 VPAVGYIVRKGNKSIIYTGDT-GPTDRLWDFTDNISALIVEVSFPNEMEKLALLTRHLTP 198 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTP----SRVVPAFDG 263 L+ LKKI+ + P ++TH YD + ++ DG Sbjct: 199 ALLATELKKIKNL-PPRILITH-PKPQHYDKIASELDDLGVEQIELLRDG 246 >gi|28378771|ref|NP_785663.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|300768290|ref|ZP_07078195.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180964|ref|YP_003925092.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271608|emb|CAD64514.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum WCFS1] gi|300494354|gb|EFK29517.1| metallo-beta-lactamase superfamily protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046455|gb|ADN98998.1| metallo-beta-lactamase superfamily protein (putative) [Lactobacillus plantarum subsp. plantarum ST-III] Length = 558 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L I A++ TH H DHI GI + LKQ Sbjct: 36 ILIDAGIKFPEDELLGIDYVIPDYSYLVANQQKIKALVITHGHEDHIGGI----PFLLKQ 91 Query: 103 KRPIDVYAAPDCMKHLF 119 + +YA P + + Sbjct: 92 IN-VPIYAGPLALALIK 107 >gi|313227653|emb|CBY22800.1| unnamed protein product [Oikopleura dioica] Length = 295 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 23/129 (17%) Query: 52 SNTTVIVDTGPDFYMQV-------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 V++DTG + L + ID ++ +H H DHI G + + Sbjct: 38 GQRRVLLDTGSPNDESIVSSLVDVLDSENCEIDKIVISHWHFDHIGG---VEAIQRQIGS 94 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN------DVPICMKSAGGV 158 I +Y + +K ++ P ++ V E D + S G Sbjct: 95 EIPLYKHKRV------RYPKVYKGAGEKM-PSGLDIPVFEEQYWNFLADGDVLETSCGSK 147 Query: 159 IEAIPILQQ 167 I+ + Sbjct: 148 IQVVFTPGH 156 >gi|269121239|ref|YP_003309416.1| beta-lactamase [Sebaldella termitidis ATCC 33386] gi|268615117|gb|ACZ09485.1| beta-lactamase domain protein [Sebaldella termitidis ATCC 33386] Length = 206 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 ++E L++ +L TH H DHI GI + Y + + VY ++ L++S Sbjct: 44 MKENDLNLTGILLTHGHYDHIIGIPDIIDY-----KKVPVYIGEKDIEFLYDS 91 >gi|17546881|ref|NP_520283.1| ribonuclease Z [Ralstonia solanacearum GMI1000] gi|17429181|emb|CAD15869.1| probable cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III protein [Ralstonia solanacearum GMI1000] Length = 338 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Query: 46 RVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++ D G +L Q+L + V TH H DH G D L L +K Sbjct: 20 YLDFHDERRALLFDLGDLSR--LLPGQLLRLSHVFVTHTHMDHFAGFDRLLRVSLGRKDR 77 Query: 106 I 106 I Sbjct: 78 I 78 >gi|218767379|ref|YP_002341891.1| putative hydrolase [Neisseria meningitidis Z2491] gi|121051387|emb|CAM07679.1| putative hydrolase [Neisseria meningitidis Z2491] gi|254673753|emb|CBA09424.1| glyoxalase II family protein [Neisseria meningitidis alpha275] gi|319409640|emb|CBY89940.1| putative metallo-dependent hydrolase [Neisseria meningitidis WUE 2594] gi|325133375|gb|EGC56040.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M13399] gi|325206953|gb|ADZ02406.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M04-240196] Length = 210 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|312218507|emb|CBX98453.1| similar to metallo-beta-lactamase domain protein [Leptosphaeria maculans] Length = 286 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++DTG VL+ + +SID L TH H DHI G+ L Sbjct: 42 GSQRILIDTGEGKPEWIASIKSVLKNENISIDKALLTHWHHDHIQGVPDL 91 >gi|303260105|ref|ZP_07346078.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP-BS293] gi|303261289|ref|ZP_07347237.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS292] gi|303263954|ref|ZP_07349875.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS397] gi|303265944|ref|ZP_07351840.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS457] gi|303268327|ref|ZP_07354124.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS458] gi|302637423|gb|EFL67910.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP14-BS292] gi|302638800|gb|EFL69262.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae SP-BS293] gi|302642165|gb|EFL72515.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS458] gi|302644528|gb|EFL74779.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS457] gi|302646359|gb|EFL76585.1| metallo-beta-lactamase superfamily protein [Streptococcus pneumoniae BS397] Length = 553 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDEDTEIDFGGTVVSFFPTTYSVPESLGIVLKTAEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|289168419|ref|YP_003446688.1| hypothetical protein smi_1586 [Streptococcus mitis B6] gi|288907986|emb|CBJ22826.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 553 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 30/140 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I V TH HAD I + +L + + V+ + ++ F Sbjct: 55 LFENKDRIAGVFLTHGHADAIGALP-----YLLAEAKVPVFGSELTIELAK-----LFVK 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------------ILQQHGRISSLG- 175 +D + D + G V+ P + G I G Sbjct: 105 GND----AVKKFNDFHVIDEDTEIDFGGTVVSFFPTTYSVPESLGIVLKTAEGSIVYTGD 160 Query: 176 FRFGNVA---YCTDVNAFPA 192 F+F A Y TD Sbjct: 161 FKFDQTASESYATDFARLAE 180 >gi|254671207|emb|CBA08383.1| glyoxalase II family protein [Neisseria meningitidis alpha153] Length = 210 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGSHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLKVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|121635707|ref|YP_975952.1| putative hydrolase [Neisseria meningitidis FAM18] gi|120867413|emb|CAM11185.1| putative hydrolase [Neisseria meningitidis FAM18] gi|316983936|gb|EFV62915.1| metallo-beta-lactamase superfamily protein [Neisseria meningitidis H44/76] gi|325131292|gb|EGC54003.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M6190] gi|325139372|gb|EGC61912.1| metallo-beta-lactamase domain protein [Neisseria meningitidis CU385] Length = 221 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 25 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 80 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 81 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 135 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 136 AFQVLHIPGHTPGH 149 >gi|91203527|emb|CAJ71180.1| similar to hydroxyacylglutathione hydrolase (glyoxalase II) [Candidatus Kuenenia stuttgartiensis] Length = 210 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 21/153 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 S+ + R NT ++D G + ++L++Q L++ ++ TH H DH+ G+ L Sbjct: 17 SVNCYIIGSRSDNTAAVIDAGGNVKEIVEILKKQNLTLKYIINTHAHFDHVGGVSELHAL 76 Query: 99 ----FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 FL + + + + L E Y + P V+ +I+N ++P+ + Sbjct: 77 TGAPFLLHQGDVPL------LDFLDEQSNYFGLPPIPK---PKVDRYLIDNEELPLGDEV 127 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 I P H + F F N + D Sbjct: 128 I--RIIHTP---GHSP-GCVCFLFNNAIFAGDT 154 >gi|84687587|ref|ZP_01015462.1| pyrroloquinoline quinone biosynthesis protein PqqB [Maritimibacter alkaliphilus HTCC2654] gi|84664377|gb|EAQ10866.1| pyrroloquinoline quinone biosynthesis protein PqqB [Rhodobacterales bacterium HTCC2654] Length = 320 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 79/272 (29%), Gaps = 63/272 (23%) Query: 18 VPRITGDWGACDPT--NPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS 75 VP+ + +C +P ++SL S E +V+ PD Q+ + Sbjct: 28 VPQWNCNCASCQAARRDPSLADGQASLAFSADGENW----FLVNASPDLRQQI--NDIPE 81 Query: 76 ID------------AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 + VL + D + G+ L++ P ++A + L ++ Sbjct: 82 LHPRSGKLRDSPIAGVLLANGEVDALVGL-----LSLREGSPFGIWAHDRVLSVLEQN-- 134 Query: 124 YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ---------HG----- 169 F LD T P I V G +EA + + HG Sbjct: 135 SIFNVLDRETVPRRAIDIGTPFELVLQDGTPTGMTVEAFEVPGKSAWYLEKTSHGHQRDV 194 Query: 170 RISSLGFRF----GNVAY-CTDVNAFPAESLEKLQNLDFLIIDAL--------------K 210 +LG G + T ++L+ + + D K Sbjct: 195 PGDTLGLEITGPDGRKVFVITACAGLDQSLADRLRGAEVVFFDGTLWRDDELLVTGLGQK 254 Query: 211 NGLHSSHFSL---SESLKKIELINPKNAILTH 239 G H S+ ++ + K H Sbjct: 255 TGQRMGHMSMSGPDGVVEAFRDLGVKRRFFIH 286 >gi|312143633|ref|YP_003995079.1| RNA-metabolising metallo-beta-lactamase [Halanaerobium sp. 'sapolanicus'] gi|311904284|gb|ADQ14725.1| RNA-metabolising metallo-beta-lactamase [Halanaerobium sp. 'sapolanicus'] Length = 558 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D+G F L + I+ ++ TH H DHI G+ Y Sbjct: 31 GEDMLIIDSGVKFPENDLLGIDLVIPDFEYVIKNKDRINGIVLTHGHLDHIGGL----PY 86 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LK+ +Y + L L + ++ + + G Sbjct: 87 LLKEINA-PIYGTKLTLGLLE-------GNLKEHRLLKDCRLKIVHSGK-----EIQVGN 133 Query: 159 IEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 I H + G + Y +D Sbjct: 134 FTVEFIRVNHSIADTCALAIHTPLGPIVYASDFK 167 >gi|167525833|ref|XP_001747251.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774546|gb|EDQ88175.1| predicted protein [Monosiga brevicollis MX1] Length = 806 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 34/128 (26%), Gaps = 26/128 (20%) Query: 53 NTTVIVDTGP--DFYMQVLREQVLSID------------AVLYTHPHADHIHGIDGLRGY 98 N +++D G DF L D A++ TH H DHI GI Sbjct: 134 NKWLMIDYGMMFDFESGALGANGYVADTTFIEERKKDLVALVVTHGHEDHIGGI-----V 188 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 I +Y L + F + P + + + Sbjct: 189 SKWADWQIPIYCTALTGHMLRQRF-------EMTDVDPNLVEANLHVIKPKDQVDVGPFS 241 Query: 159 IEAIPILQ 166 PI Sbjct: 242 FHFQPITH 249 >gi|16761722|ref|NP_457339.1| hypothetical protein STY3078 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143206|ref|NP_806548.1| hypothetical protein t2851 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163460|ref|ZP_03349170.1| hypothetical protein Salmoneentericaenterica_26910 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213422335|ref|ZP_03355401.1| hypothetical protein Salmonentericaenterica_33188 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424926|ref|ZP_03357676.1| hypothetical protein SentesTyphi_04001 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213615975|ref|ZP_03371801.1| hypothetical protein SentesTyp_16489 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289811292|ref|ZP_06541921.1| hypothetical protein Salmonellaentericaenterica_45977 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|25345875|pir||AI0858 hypothetical protein STY3078 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504023|emb|CAD06056.1| STY3078 [Salmonella enterica subsp. enterica serovar Typhi] gi|29138839|gb|AAO70408.1| hypothetical protein t2851 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 265 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPNIAR 95 >gi|210610060|ref|ZP_03288239.1| hypothetical protein CLONEX_00425 [Clostridium nexile DSM 1787] gi|210152671|gb|EEA83677.1| hypothetical protein CLONEX_00425 [Clostridium nexile DSM 1787] Length = 567 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F LR+ + + + TH H DHI + Y Sbjct: 43 EDSIIVVDCGLAFPEDDMLGIDLVIPDITYLRDNIKKVKGFVITHGHEDHIGSL----PY 98 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 LK + +YA M + Sbjct: 99 VLKDMN-LPIYATKLTMGIIENK 120 >gi|83952323|ref|ZP_00961055.1| metallo-beta-lactamase family protein [Roseovarius nubinhibens ISM] gi|83837329|gb|EAP76626.1| metallo-beta-lactamase family protein [Roseovarius nubinhibens ISM] Length = 555 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 41/165 (24%), Gaps = 35/165 (21%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + + G ++VD G F L + ++AV TH H D Sbjct: 21 AYVYGYGKPGKERLILVDLGVTFPDMDTTPGVDLIMPDIAWLAKNRDRLEAVFITHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + L + VYA D+ P + E Sbjct: 81 HVGAVAHLYD---RLGA--PVYARAFTANIARRKMG-EHGHPDEAVTTVSAWPEMTEAGP 134 Query: 148 VPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + + H S G G + + D Sbjct: 135 FQVGF-----------VPLSHSIPESSGLVIDTPAGRIVHSGDFK 168 >gi|329298340|ref|ZP_08255676.1| hypothetical protein Pstas_21104 [Plautia stali symbiont] Length = 38 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTN--PKNRR 37 + T LG G P D AC+ P+ R Sbjct: 1 MNLTFLGTGGVQAAPLFGCDCRACERARQQPRYAR 35 >gi|304388674|ref|ZP_07370734.1| metallo-beta-lactamase domain protein [Neisseria meningitidis ATCC 13091] gi|304337341|gb|EFM03515.1| metallo-beta-lactamase domain protein [Neisseria meningitidis ATCC 13091] Length = 210 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|210633896|ref|ZP_03297911.1| hypothetical protein COLSTE_01828 [Collinsella stercoris DSM 13279] gi|210159065|gb|EEA90036.1| hypothetical protein COLSTE_01828 [Collinsella stercoris DSM 13279] Length = 739 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R V+VD G D + R V +DAV+ TH DH G+ L Sbjct: 512 RDGAHAVLVDAGVDDATRAALARNHVFRLDAVVVTHWDRDHWGGLPDLA 560 >gi|302875633|ref|YP_003844266.1| ComE operon protein [Clostridium cellulovorans 743B] gi|302578490|gb|ADL52502.1| ComE operon protein [Clostridium cellulovorans 743B] Length = 284 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 10/57 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGI 92 S+ I+ + T+ ++D+G + Y + +E++ SID ++ THPH DH G+ Sbjct: 49 SILINY-----NGTSTLIDSGSEEYSSNVINYLKKEKIKSIDNLILTHPHEDHYGGM 100 >gi|297194799|ref|ZP_06912197.1| bifunctional cobalamin biosynthesis protein cobU [Streptomyces pristinaespiralis ATCC 25486] gi|297152474|gb|EFH31780.1| bifunctional cobalamin biosynthesis protein cobU [Streptomyces pristinaespiralis ATCC 25486] Length = 185 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA G+PR C R ++L + + +++D P + Sbjct: 1 MLGTGAPAGLPRPDCPCAVCATARGPEARAATALLV--------DGALLLDLTPGAALAA 52 Query: 69 LREQ--VLSIDAVLYTHPH 85 R ++ + VL THPH Sbjct: 53 ARAGHSLVGVRQVLLTHPH 71 >gi|227111313|ref|ZP_03824969.1| hypothetical protein PcarbP_00040 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 354 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 54/199 (27%), Gaps = 38/199 (19%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 V +ID +L TH H DH + L R Sbjct: 141 DVPTIDYLLITHDHWDH---------------------LDYPTLNALRGKIRRIVTPTGV 179 Query: 132 RTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF-RFGNVAYCTDVN 188 +Y I C+K G I +P GR+ +G+ A T+ + Sbjct: 180 GSYFVKWGFPQKDITEGGWFSCLKENGVDIHVLPTQHFSGRLLKHNQTLWGSFALITEQH 239 Query: 189 AF-----------PAESLEKLQNLDFLIIDALKNGL--HSSHFSLSESLKKIELINPKNA 235 E+L D I++ + H + ES + + K Sbjct: 240 RLYLGGDSGYGAHYKAIAERLGGFDIAILECGQYDRDWPHVHMTPEESAQAASDLQAKAV 299 Query: 236 ILTHMH-VDLDYDMVLKST 253 + +H L + Sbjct: 300 LPSHNSKFKLAHHRWNDPL 318 >gi|299783047|gb|ADJ41045.1| Metallo-beta-lactamase superfamily protein [Lactobacillus fermentum CECT 5716] Length = 599 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L++ I V TH HAD I + YFL + + VY + + Sbjct: 55 LQDHADQIKGVFLTHGHADAIGAL----PYFLADFK-VPVYGSQLTIALAK------LAV 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +++ + V++ G + H +LG G++ Y Sbjct: 104 KENKQVKKFNDFHVVDE-----TKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|227514783|ref|ZP_03944832.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus fermentum ATCC 14931] gi|227086892|gb|EEI22204.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus fermentum ATCC 14931] Length = 614 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L++ I V TH HAD I + YFL + + VY + + Sbjct: 70 LQDHADQIKGVFLTHGHADAIGAL----PYFLADFK-VPVYGSQLTIALAK------LAV 118 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +++ + V++ G + H +LG G++ Y Sbjct: 119 KENKQVKKFNDFHVVDE-----TKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYT 173 Query: 185 TDVN 188 D Sbjct: 174 GDFK 177 >gi|254514262|ref|ZP_05126323.1| alkyl sulfatase or beta-lactamase [gamma proteobacterium NOR5-3] gi|219676505|gb|EED32870.1| alkyl sulfatase or beta-lactamase [gamma proteobacterium NOR5-3] Length = 454 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 12/67 (17%) Query: 51 GSNTTVIVDTGPDFYMQV-LREQVLSID-----AVLYTHPHADHIHGI------DGLRGY 98 G + VI+DTG D +R+ I AV+ TH H DH+ G+ D ++ + Sbjct: 67 GEDGLVIIDTGIDTVSGAQIRQDFRKISDKPVSAVVITHGHPDHLGGLAAFVDSDDVQVW 126 Query: 99 FLKQKRP 105 ++ + Sbjct: 127 VRERFQD 133 >gi|213582113|ref|ZP_03363939.1| hypothetical protein SentesTyph_13314 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 207 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPNIAR 95 >gi|148359508|ref|YP_001250715.1| 3',5'-cyclic nucleotide phosphodiesterase [Legionella pneumophila str. Corby] gi|296107551|ref|YP_003619252.1| 3',5'-cyclic nucleotide phosphodiesterase [Legionella pneumophila 2300/99 Alcoy] gi|148281281|gb|ABQ55369.1| 3',5'-cyclic nucleotide phosphodiesterase [Legionella pneumophila str. Corby] gi|295649453|gb|ADG25300.1| 3',5'-cyclic nucleotide phosphodiesterase [Legionella pneumophila 2300/99 Alcoy] Length = 327 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 9/120 (7%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES-FRY-CFKALDD 131 I A L +H H DH+ G+ + +++ + A + M+ L ++ F + + D Sbjct: 84 KHIPAYLISHAHLDHVMGLVMAQPELREKQT---IMAREETMQALQKNIFNWSVWGNFGD 140 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDV 187 P +N + + + + HG ++S F V Y D Sbjct: 141 SGDTPQLNFQHYQTVPLFQWVSIPDTDLHVKVFPLSHGGMASSAFLIRYEAEYVLYFGDT 200 >gi|34540530|ref|NP_905009.1| ribonuclease Z [Porphyromonas gingivalis W83] gi|37538309|sp|Q51834|RNZ_PORGI RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|34396843|gb|AAQ65908.1| metallo-beta-lactamase family protein [Porphyromonas gingivalis W83] Length = 304 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 77/275 (28%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P SS I + ++D G Q E++ + + +H H Sbjct: 11 CGSALPTTHHHPSSQVIDL-----RDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHLH 65 Query: 86 ADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G L + + V+ E F P V I Sbjct: 66 GDHCFGLPGFISTLGLLGRTGTLHVHGPEG-----IERFLSPILEQFCHRMPYQVEIHTI 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------------ 179 + + + + + +IP+ RI ++G+ F Sbjct: 121 DASRHALVHEDKSVKVYSIPLSH---RIPAVGYLFEEKCRARHLNKAAAEFYNIPLAEYP 177 Query: 180 -----------------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 AYC+D F + +Q +D L +A Sbjct: 178 LIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDT-EFCPSIVPIIQGVDLLYHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTH 239 + H + E+ + K ++ H Sbjct: 237 MEEDRARAKETFHSTAKEAAEIARQAGAKRLLIGH 271 >gi|240171171|ref|ZP_04749830.1| hydrolase [Mycobacterium kansasii ATCC 12478] Length = 558 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 21/82 (25%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPTHDEPGVDLILPDLRH--IEDRLDDIEALVLTHAHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMK 116 + LK + I V + + Sbjct: 91 --PFLLKLRPDIPVVGSRFTLA 110 >gi|227329737|ref|ZP_03833761.1| metallo hydrolase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 329 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 17/97 (17%) Query: 56 VIVDTGPD---------FYMQVLREQVL--SIDAVLYTHPHADHIHGI--DGLRGY---- 98 ++VDTG + ID VL TH HADH G+ DG + Sbjct: 101 ILVDTGAGPLFGKLGGKLPDNLRAAGYPPEKIDTVLLTHIHADHSGGVSRDGKLVFPNAT 160 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 ++ D + P H+ +S ++ F +D P Sbjct: 161 VYVNQKDADFWLNPANSDHVRDSEKHTFGQSEDSLQP 197 >gi|212639506|ref|YP_002316026.1| mRNA degradation ribonucleases J1/J2 [Anoxybacillus flavithermus WK1] gi|212560986|gb|ACJ34041.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Anoxybacillus flavithermus WK1] Length = 560 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 39/124 (31%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L EQ I + TH H DHI I ++ +K + VY A + + E Sbjct: 65 LVEQQERIRGIFLTHGHDDHIGAI-----AYVLRKITVPVYGAKLTLALMEEK------- 112 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 L ++ I I D I A H LG G + Y Sbjct: 113 LKEQGITSKAKRIEIHA-DSEIVFDKAVVSF----FQTNHSIPDCLGVSIQTSQGAIVYT 167 Query: 185 TDVN 188 +D Sbjct: 168 SDFK 171 >gi|124268677|ref|YP_001022681.1| metallo-beta-lactamase family protein [Methylibium petroleiphilum PM1] gi|124261452|gb|ABM96446.1| metallo-beta-lactamase family protein [Methylibium petroleiphilum PM1] Length = 468 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V++D G + LRE+ IDAV+ +H H DH ++Q Sbjct: 39 GGARVLLDCGLFQGYKTLRERNWAPLAVPPAQIDAVVLSHAHLDHCG----WLPVLVRQG 94 Query: 104 RPIDVYAAPDCMK 116 VYA+ Sbjct: 95 FKGPVYASAATRD 107 >gi|154422115|ref|XP_001584070.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] gi|121918315|gb|EAY23084.1| RNA-metabolising metallo-beta-lactamase family protein [Trichomonas vaginalis G3] Length = 588 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 36/189 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF-------YMQVLREQVLSIDAVLYTHPHADHIHG 91 RSS+ + + V++D G +F + ++ +D VL +H H DH+ Sbjct: 26 RSSILVEI-----GSKKVLLDCGVNFTATDEKDRLPAYQDPFPKVDLVLISHIHTDHLAA 80 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + L K VY + K ++ Y + N I Sbjct: 81 VPYLTEV---LKCQAPVYMTRASQMMMPIMLDDFLKVTENPPYKA----EDLTNCKPKIK 133 Query: 152 MKSAGGVIEAIP------ILQQHGRISSLGF----RFGNVAYCTDVNAFPA-----ESLE 196 + EA P H + + F R + Y D +A ++ Sbjct: 134 VVEFYSRFEAAPGIFVQAFPAGH-ILGAACFFVQVRGLSFIYTGDFSAIADHHLSGHAVP 192 Query: 197 KLQNLDFLI 205 +L D LI Sbjct: 193 RLF-PDLLI 200 >gi|77458188|ref|YP_347693.1| Beta-lactamase-like [Pseudomonas fluorescens Pf0-1] gi|77382191|gb|ABA73704.1| metallo-beta-lactamase superfamily protein [Pseudomonas fluorescens Pf0-1] Length = 327 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 19/73 (26%) Query: 56 VIVDTGPD-----------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 ++VDTG MQ + +DA+L TH H DH+ G+ Q+R Sbjct: 97 ILVDTGAGQCIGATAGQLSANMQAAGYKPEQVDAILLTHLHLDHVCGLVD------GQQR 150 Query: 105 PIDVYAAPDCMKH 117 PI +A Sbjct: 151 PI--FANATVYAA 161 >gi|70996516|ref|XP_753013.1| tRNA processing endoribonuclease Trz1 [Aspergillus fumigatus Af293] gi|66850648|gb|EAL90975.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus fumigatus Af293] gi|159131747|gb|EDP56860.1| tRNA processing endoribonuclease Trz1, putative [Aspergillus fumigatus A1163] Length = 1081 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 94/320 (29%), Gaps = 111/320 (34%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS ++ + ++D G + Sbjct: 573 EIVTLGTGSSS----------------PSKYRNVSSTLVNVPG----VGSYLLDCGENTI 612 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRPI------- 106 Q+ L+E + ++ + +H HADH G I P Sbjct: 613 GQLKRMYEPKKLQEVLQNLRLIWISHLHADHHLGTASVIKEWFRANYPNGVPGAGDVETD 672 Query: 107 ------------------------------------------DVYAAPDCMKHLFESFRY 124 Y PD ++R+ Sbjct: 673 MRKILQEKRLFVVSEEMMIGWLEEYAGVEDYGFGKLVPLAAHPSYINPDSKNTTKFTYRH 732 Query: 125 CFKALDDRTYP--------PIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQHGR---- 170 C DD +YP P + + ++ P+ ++ A G+ + + H R Sbjct: 733 C---RDDGSYPGWEADGSRPQTSTLDFNDDSSPLAPLLRQATGLADILTTRVSHCRGAMA 789 Query: 171 ---ISSLGFRF---GNVAYCTDVNAFPAESLEKLQNL---DFLIIDALKNGLHSSHFSLS 221 + GF+ G+ T+ +S + D + + A+ H + S Sbjct: 790 VSLVFPDGFKLSFSGDCRPSTNFATIGRDSTVLIHEATFQDDMAVSAIAKK----HSTTS 845 Query: 222 ESLKKIELINPKNAILTHMH 241 E+L+ ++ + +LTH Sbjct: 846 EALEVGRMMQARTVVLTHFS 865 >gi|325279780|ref|YP_004252322.1| hypothetical protein Odosp_1076 [Odoribacter splanchnicus DSM 20712] gi|324311589|gb|ADY32142.1| hypothetical protein Odosp_1076 [Odoribacter splanchnicus DSM 20712] Length = 267 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 76/264 (28%), Gaps = 63/264 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 +LG G ++ V R +VD G Sbjct: 1 MELIMLGTGNAM-VTRCYNTCFVLSS---------------------GEEYFLVDAGGGN 38 Query: 64 -FYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYA 110 + Q+ + V I + TH H DHI G + +++ +R VY Sbjct: 39 GIFKQLEQAGVPFTGIREMFVTHAHTDHILG----AIWVIRKIATLMSNDKYRRNFIVYG 94 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + L +C L + I I + G I + Sbjct: 95 HNEVIDALRT---FCRLTLPGKILKYIDERIFWGEVKDGTRKEILGLPICF--FDILSTK 149 Query: 171 ISSLGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHS 215 + GFR + D + + ++ D+L+ +A H Sbjct: 150 MKQFGFRVLLPDGQVLVCLGD-EPYNEACKKYVEQADWLLAEAFCLYRDREIFSPYEKH- 207 Query: 216 SHFSLSESLKKIELINPKNAILTH 239 H + ++ + E + K+ +L H Sbjct: 208 -HSTALDAGRLAEALGVKHLVLYH 230 >gi|288553526|ref|YP_003425461.1| hypothetical protein BpOF4_02510 [Bacillus pseudofirmus OF4] gi|288544686|gb|ADC48569.1| hypothetical protein BpOF4_02510 [Bacillus pseudofirmus OF4] Length = 359 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 25/194 (12%) Query: 53 NTTVIVDTGPDFYMQ---VLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI-D 107 ++TV++D G + +L+E V ID + THPHADHI + + F P+ + Sbjct: 56 DSTVLIDAGRHDRDEVVSLLKEAGVTEIDLFVGTHPHADHIGQVAQVLAEF-----PVAE 110 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+ + D H +F +A+ D + + + + IE I + Sbjct: 111 VWMSGD--DHTTRTFERAIQAIADS----VADYYEPRAGEE---FEIGSLTIEVINPTEL 161 Query: 168 HGRI--SSLGFRF--GNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSES 223 G ++G R G +A+ + LE + N L D +K G H S S E+ Sbjct: 162 TGDFHEGAIGLRMVHGEIAWLFMADIEKEIELELVDNGVNLQADVIKLGHHGSSTSSEEA 221 Query: 224 LKKIELINPKNAIL 237 + ++P A+ Sbjct: 222 --FLRKVDPMYAVY 233 >gi|300778243|ref|ZP_07088101.1| beta-lactamase family protein [Chryseobacterium gleum ATCC 35910] gi|300503753|gb|EFK34893.1| beta-lactamase family protein [Chryseobacterium gleum ATCC 35910] Length = 464 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 12/70 (17%) Query: 55 TVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 T+++D G Q L V IDA++ TH H DH I +K Sbjct: 28 TILIDCGLFQGIKYLREQNWLPLNTDVSKIDAIILTHAHLDHCGYI----PLIVKNGFKG 83 Query: 107 DVYAAPDCMK 116 +Y + Sbjct: 84 KIYMTGPTKE 93 >gi|229541258|ref|ZP_04430318.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229325678|gb|EEN91353.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 555 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYTYLVKNADKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +Y + + L++ I I+ +DV K++ Sbjct: 89 QINVPIYGGKLALGLIRNK-------LEEHGLLRQTKLIEIKEDDVIKFRKTS-----VT 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|50121101|ref|YP_050268.1| hypothetical protein ECA2173 [Pectobacterium atrosepticum SCRI1043] gi|49611627|emb|CAG75075.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 354 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 51/204 (25%), Gaps = 46/204 (22%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + ID +L TH H DH + L R Sbjct: 140 EDIPEIDYLLITHDHWDH---------------------LDYPTLNALRGKIRRIVTPTG 178 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG------------- 175 +Y I D +K G I +P GR+ Sbjct: 179 VGSYFVKWGFPRKDITEGDWFSSLKENGVEIHVLPTQHFSGRLLKHNQTLWGSFALITAQ 238 Query: 176 ---FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGL--HSSHFSLSESLKKIELI 230 + G+ Y +L D I++ + H + ES + + Sbjct: 239 HRLYLGGDSGYGAHYKEIAE----RLGGFDIAILECGQYDSDWPYVHMTPEESAQAASDL 294 Query: 231 NPKNAILTHMH-VDLDYDMVLKST 253 + K + +H L + Sbjct: 295 HAKAVLPSHNSKFKLAHHRWNDPL 318 >gi|317153877|ref|YP_004121925.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] gi|316944128|gb|ADU63179.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio aespoeensis Aspo-2] Length = 552 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 57/194 (29%), Gaps = 36/194 (18%) Query: 1 MKDYYHFTI--LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 M D T LG G+ I + A RS + + + V Sbjct: 1 MADTTSLTFYPLG-----GLGEIGMNCMAFKTE-------RSMVLVDCGLMFPEDYHFGV 48 Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 D + VL+ + + ++ ++ TH H DHI + + L Q + VY + + + Sbjct: 49 DVVIPCFDFVLKNKAI-LNGIVLTHGHEDHIGAL----PW-LLQNLDVPVYGSQFTLGLV 102 Query: 119 FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 L + + + D + G H I G Sbjct: 103 ENK-------LREHDLARWADLRTVRPYD-----RVLLGDFTFNFFPVCHSIIEGFGLGI 150 Query: 179 ----GNVAYCTDVN 188 G V + D Sbjct: 151 ETPVGRVVHTGDFK 164 >gi|251790822|ref|YP_003005543.1| beta-lactamase superfamily hydrolase [Dickeya zeae Ech1591] gi|247539443|gb|ACT08064.1| beta-lactamase superfamily hydrolase [Dickeya zeae Ech1591] Length = 255 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 6/77 (7%) Query: 55 TVIVDTGPDFYMQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYF--LKQKRPIDVY 109 ++VD GP Q L + I A+ TH H DH+ G+ + + P+ + Sbjct: 29 QLLVDCGPTV-PQALWQRQTAPDDIHAIYMTHAHPDHVLGLTTWLNWCESCGRTAPLTLI 87 Query: 110 AAPDCMKHLFESFRYCF 126 A L + F Sbjct: 88 APRQQRPQLQRLVDFAF 104 >gi|72161196|ref|YP_288853.1| metallo-beta-lactamase family hydrolase [Thermobifida fusca YX] gi|71914928|gb|AAZ54830.1| putative hydrolase of the metallo-beta-lactamase superfamily [Thermobifida fusca YX] Length = 561 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 21/75 (28%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF + LR ++ ++A++ TH H DHI G+ Sbjct: 40 EGKMLIIDCGVLFPAEEQPGVDLILPDF--EYLRGRLDDVEAIVLTHGHEDHIGGV---- 93 Query: 97 GYFLKQKRPIDVYAA 111 + L+++ I + + Sbjct: 94 PFLLRERTDIPLVGS 108 >gi|256371450|ref|YP_003109274.1| beta-lactamase domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008034|gb|ACU53601.1| beta-lactamase domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 551 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 24/98 (24%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 ++AV+ TH H DHI G+ FL + + V+ + + + Sbjct: 61 ELEAVIVTHGHEDHIGGLP-----FLLAEHRVPVWGSEVTLGFVRNR------------- 102 Query: 135 PPIVNPIVIENNDVPICMKSA---GGVIEAIPILQQHG 169 + + + D+ I A G EA I H Sbjct: 103 ---LREHDLGDVDLRILADGARVSVGSFEAEAIPVTHS 137 >gi|238487352|ref|XP_002374914.1| metallo-beta-lactamase domain protein, putative [Aspergillus flavus NRRL3357] gi|317143645|ref|XP_001819598.2| metallo-beta-lactamase domain protein [Aspergillus oryzae RIB40] gi|220699793|gb|EED56132.1| metallo-beta-lactamase domain protein, putative [Aspergillus flavus NRRL3357] Length = 292 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 52 SNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++DTG +L E+ ++ L TH H DH++GI LR Sbjct: 42 GPQRILIDTGEGKPSWAAHLKTILSEENATVHKALLTHWHHDHVNGIPDLRKLC 95 >gi|25011843|ref|NP_736238.1| hypothetical protein gbs1804 [Streptococcus agalactiae NEM316] gi|24413384|emb|CAD47463.1| Unknown [Streptococcus agalactiae NEM316] Length = 559 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 8/112 (7%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + I A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 64 ENIDRIKALVITHGHEDHIGGIP-----FLLKQANLPIYAGPLALALIKGKLEEHGLLRD 118 Query: 131 DRTYPPIVNP-IVIENNDVPICMKSAGGVIEAIPILQ-QHGRISSLG-FRFG 179 Y N + +N V + ++ G++ G F+F Sbjct: 119 ATLYEIHANTELTFKNLSVTFFRTTHSIPEPLSIVIHTPQGKVICTGDFKFD 170 >gi|319745238|gb|EFV97557.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae ATCC 13813] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|296330005|ref|ZP_06872489.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676729|ref|YP_003868401.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153044|gb|EFG93909.1| putative hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414973|gb|ADM40092.1| putative hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 220 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 8/134 (5%) Query: 42 LKISRVSERGSNTTVIVDTG-PDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGY 98 + + + I+DTG F +R + + A+L TH H+DHI G Sbjct: 23 IPVHTWFIKDGEDVYIIDTGIERFADAQMRAALAIGNPKAILLTHGHSDHIQGAPKWL-- 80 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 ++ I +YA + ++ Y K + T + ++E + ++ Sbjct: 81 ---ERFDIPIYAHQKELVYINGEAPYPNKNEVEHTGVAHIVQPLMEQTLAHLPLQFYLTP 137 Query: 159 IEAIPILQQHGRIS 172 + + H + Sbjct: 138 GHSPGHVVYHHEVD 151 >gi|167630475|ref|YP_001680974.1| metallo-beta-lactamase family protein, putative [Heliobacterium modesticaldum Ice1] gi|167593215|gb|ABZ84963.1| metallo-beta-lactamase family protein, putative [Heliobacterium modesticaldum Ice1] Length = 573 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 30/131 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D+G F + L + + + TH H DHI G+ + Sbjct: 48 GDDIIVIDSGVKFPGEELLGIDLVIPDITYLVQNADRVRGIFLTHGHEDHIGGL----PF 103 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 LKQ + + VY + + L + I +DV G Sbjct: 104 TLKQIQ-VPVYGTRLTLGLVKNK-------LTEHGLIREAKLHEITADDV-----VNVGA 150 Query: 159 IEAIPILQQHG 169 + H Sbjct: 151 FQLEFFRVNHS 161 >gi|115889594|ref|XP_785886.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115929554|ref|XP_001177319.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 289 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTG----PDFYMQV---LREQVLSIDAVLYTHPHADHIHGIDGL 95 V++DTG P+F + L E SI +L TH H DH+ GI + Sbjct: 39 GTRRVLIDTGEENKPEFLKNLRSTLAENGTSIQEILVTHWHHDHVGGIADI 89 >gi|22537344|ref|NP_688195.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] gi|22534216|gb|AAN00068.1|AE014246_3 metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 2603V/R] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|76787057|ref|YP_329886.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] gi|76562114|gb|ABA44698.1| metallo-beta-lactamase family protein [Streptococcus agalactiae A909] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|15677871|ref|NP_275039.1| glyoxalase II family protein [Neisseria meningitidis MC58] gi|254804141|ref|YP_003082362.1| putative Zn-dependent hydrolase [Neisseria meningitidis alpha14] gi|7227311|gb|AAF42369.1| glyoxalase II family protein [Neisseria meningitidis MC58] gi|254667683|emb|CBA03530.1| putative Zn-dependent hydrolase [Neisseria meningitidis alpha14] gi|261393373|emb|CAX51009.1| putative metallo-dependent hydrolase [Neisseria meningitidis 8013] gi|308390148|gb|ADO32468.1| glyoxalase II family protein [Neisseria meningitidis alpha710] gi|325127327|gb|EGC50262.1| metallo-beta-lactamase domain protein [Neisseria meningitidis N1568] gi|325137321|gb|EGC59909.1| metallo-beta-lactamase domain protein [Neisseria meningitidis ES14902] gi|325141408|gb|EGC63887.1| metallo-beta-lactamase domain protein [Neisseria meningitidis 961-5945] gi|325199140|gb|ADY94596.1| metallo-beta-lactamase domain protein [Neisseria meningitidis G2136] gi|325201097|gb|ADY96552.1| metallo-beta-lactamase domain protein [Neisseria meningitidis H44/76] gi|325204998|gb|ADZ00452.1| metallo-beta-lactamase domain protein [Neisseria meningitidis M01-240355] Length = 210 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|25011308|ref|NP_735703.1| hypothetical protein gbs1259 [Streptococcus agalactiae NEM316] gi|23095732|emb|CAD46918.1| Unknown [Streptococcus agalactiae NEM316] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|77412794|ref|ZP_00788999.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] gi|77161090|gb|EAO72196.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 515] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|77407803|ref|ZP_00784556.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] gi|77173550|gb|EAO76666.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae COH1] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|77405393|ref|ZP_00782487.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] gi|77175975|gb|EAO78750.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae H36B] Length = 329 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|77412233|ref|ZP_00788551.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] gi|77161702|gb|EAO72695.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae CJB111] Length = 553 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|76800001|ref|ZP_00781947.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] gi|76584682|gb|EAO61458.1| metallo-beta-lactamase superfamily protein [Streptococcus agalactiae 18RS21] Length = 244 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYIIAEVKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ ++ I + A H S+G GN+ Y Sbjct: 104 KNSTAVKKFNNFHVID-SETEIEFQDAVISF----FKTTHSIPESMGIVIGTKEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|114330238|ref|YP_746460.1| beta-lactamase domain-containing protein [Nitrosomonas eutropha C91] gi|114307252|gb|ABI58495.1| beta-lactamase domain protein [Nitrosomonas eutropha C91] Length = 468 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 32/122 (26%), Gaps = 38/122 (31%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG--- 61 T LG GV +TG + + +VD G Sbjct: 1 MQITFLG-----GVGEVTGSC----------------YLVET-----DDVRFLVDCGMFQ 34 Query: 62 -----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + S+D VL TH H DH + L + VY P Sbjct: 35 GGRDASRKNHTAINFNPESMDFVLLTHAHVDHSGLLPRLSVLGFRG----PVYMTPATAD 90 Query: 117 HL 118 L Sbjct: 91 LL 92 >gi|116491239|ref|YP_810783.1| mRNA degradation ribonuclease J1/J2enzyme [Oenococcus oeni PSU-1] gi|290890784|ref|ZP_06553851.1| hypothetical protein AWRIB429_1241 [Oenococcus oeni AWRIB429] gi|116091964|gb|ABJ57118.1| RNase J1 [Oenococcus oeni PSU-1] gi|290479556|gb|EFD88213.1| hypothetical protein AWRIB429_1241 [Oenococcus oeni AWRIB429] Length = 573 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 32/186 (17%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + + A++ TH H DHI I + + + VYA P + + Sbjct: 73 LVQNIEKVKALVITHGHEDHIGAIS-----YFLRAVNVPVYAPPFALALIK-------GK 120 Query: 129 LDDRTYPPIVNPIVIENNDV---------PICMKSAGGVIEAIPILQQHGRISSLG-FRF 178 L++ I+ + + + + G I G F+F Sbjct: 121 LEEHNLLKKTELHEIKPDSFLDFGKLSVEFFQTTHSIPDTVGVAVHTPKGTIVETGDFKF 180 Query: 179 GNVAYCTDVNAFPA-ESLEKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKI-ELIN 231 N +P + K+ + + L+ D A + S + +S+++I + I Sbjct: 181 DL---TPVTNQYPDMLKMAKIGREGVLLLMSDSTNAERPEFTKSEAWVQKSIERIFDRIT 237 Query: 232 PKNAIL 237 I Sbjct: 238 KGRIIF 243 >gi|330884577|gb|EGH18726.1| metallo-beta-lactamase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 53 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYM---QVLREQV--LSIDAVLYTHPHADHIHGI 92 ++T V+VD G ++ R V + A+L TH HADH+HG+ Sbjct: 1 NDTYVLVDCGFSLRETERRLARLGVAANQLSAILVTHEHADHVHGV 46 >gi|55377930|ref|YP_135780.1| hypothetical protein rrnAC1117 [Haloarcula marismortui ATCC 43049] gi|55230655|gb|AAV46074.1| unknown [Haloarcula marismortui ATCC 43049] Length = 191 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + TV+VD G +F + + E V IDAV TH H DH+ +D + F + VY Sbjct: 21 GDRTVLVDVGNEFDVVSTVEEHVDDIDAVAVTHTHYDHVENLDSVVDAF-----DVPVYG 75 >gi|34530988|dbj|BAC86026.1| unnamed protein product [Homo sapiens] gi|119610369|gb|EAW89963.1| elaC homolog 2 (E. coli), isoform CRA_c [Homo sapiens] Length = 501 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 30/111 (27%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 Y LG G++ +P + S + +S T++++D G Sbjct: 384 SQYPEIIFLGTGSA--IPM---------------KIRNVSATLVNISPD---TSLLLDCG 423 Query: 62 PDFYMQVLREQVLSID-------AVLYTHPHADHIH---GIDGLRGYFLKQ 102 + Q+ R +D AV +H HADH G+D G + + Sbjct: 424 EGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHHTVSVGLDHKAGAWRRH 474 >gi|94984388|ref|YP_603752.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] gi|94554669|gb|ABF44583.1| beta-lactamase-like protein [Deinococcus geothermalis DSM 11300] Length = 305 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 9/73 (12%) Query: 45 SRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S V E G +++DTG D ++ L L+ A+L TH HADH G + Sbjct: 24 SVVVEDGRGGALLIDTGLDDSHARKLLRALEAAKLTPTAILNTHSHADHHGG----NAFL 79 Query: 100 LKQKRPIDVYAAP 112 LK+ ++VYA P Sbjct: 80 LKRFPELEVYAPP 92 >gi|295397618|ref|ZP_06807693.1| beta-lactamase family protein [Aerococcus viridans ATCC 11563] gi|294974081|gb|EFG49833.1| beta-lactamase family protein [Aerococcus viridans ATCC 11563] Length = 201 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 6/117 (5%) Query: 46 RVSERGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR-GYFLKQ 102 +G+ T+I+D G + Q++ E L+ A+L TH H DHI ++ +R Y + Sbjct: 16 YFIVKGNKDTLIIDPGDQTETIEQLIAENQLNPVAILLTHAHFDHIGAVEDIRERYNIDV 75 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + I D +K D+ V + VP + I Sbjct: 76 WQHI---IEADWLKDKQTRMPKTHTHYWDKMGQQSVAGFTFKTAHVPGHSPGSVVYI 129 >gi|229030484|ref|ZP_04186522.1| hypothetical protein bcere0028_25530 [Bacillus cereus AH1271] gi|228730828|gb|EEL81770.1| hypothetical protein bcere0028_25530 [Bacillus cereus AH1271] Length = 461 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 79/199 (39%), Gaps = 30/199 (15%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S T+++D G + +V+ +ID ++ THP ADH+ G+D + Y + K Sbjct: 230 SGETILIDAGNNGKGKVVANYLKGLGFQTIDYMIATHPDADHVGGLDEVL-YSMNVKN-- 286 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTY------PPIVNPIVIENNDVPICMKSAGGVIE 160 VYA + H ++F+ A+ ++ + PI N+ +K G + Sbjct: 287 -VYAPK--VSHTTQTFKDFLTAVANKGLTIKEAKSGVTLPINGLNSQFLAPVKEYGNDLN 343 Query: 161 AIP--ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + HG + + D + + + + L D LK G H S Sbjct: 344 EWSAVLKVTHGS--------KSFLFTGDAESKSEKDMVATHGSN-LKSDVLKPGHHGSKT 394 Query: 219 SLSESLKKIELINPKNAIL 237 S S+ ++ + P A++ Sbjct: 395 SSSQ--PFLDAVKPNIAVI 411 >gi|261400817|ref|ZP_05986942.1| metallo-beta-lactamase domain protein [Neisseria lactamica ATCC 23970] gi|269209427|gb|EEZ75882.1| metallo-beta-lactamase domain protein [Neisseria lactamica ATCC 23970] Length = 210 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----KTHKVPVLGPHREDEFLLQSLPQTTAQYGFPASPAFAPTRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|218708656|ref|YP_002416277.1| putative exonuclease [Vibrio splendidus LGP32] gi|218321675|emb|CAV17629.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Vibrio splendidus LGP32] Length = 456 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 18/81 (22%) Query: 50 RGSNTTVIVDTG--------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 R S V++D G D + + ++A+L TH H DHI + L Sbjct: 20 RDSGQAVLIDCGLFQGLDLQGKKLQGEDARPLDIEFETSHLNALLLTHTHIDHIGRLPWL 79 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 Q +Y + Sbjct: 80 LASGFNQ----PIYCTQATAE 96 >gi|145633273|ref|ZP_01789004.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae 3655] gi|144986119|gb|EDJ92709.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae 3655] Length = 233 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +++AVL TH H DH G+ F K+ + +Y + +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATVEAVLLTHEHEDHTQGV----SAFKKRYPTVPIYGSQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|323703809|ref|ZP_08115446.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] gi|323531224|gb|EGB21126.1| beta-lactamase domain-containing protein [Desulfotomaculum nigrificans DSM 574] Length = 284 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 35/203 (17%) Query: 50 RGSNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++VD G D + L+ + + +D ++ THPH DHI G+D + F + Sbjct: 52 QSDGRNMLVDAGNNGDADLVVDYLKKQGIDKLDVIIGTHPHEDHIGGLDAVIKNFPIGQ- 110 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 VY + H ++++ AL + I+ A G + + Sbjct: 111 ---VYLPK--VNHTSKTYKDVLVALKKKQ---------IKATPAHGGQNFALGQAQVEIM 156 Query: 165 LQQHGRISSLGFR--FGNVAY-------CTDVNAFPAESLEKL-QNLDFLIIDALKNGLH 214 + L + Y D E + ++ NL D LK H Sbjct: 157 APNADKYEELNDYSVVCKITYGQTSFLLTGDAGVRSEEEMLQMGYNLK---ADVLKVAHH 213 Query: 215 SSHFSLSESLKKIELINPKNAIL 237 SH + ++ ++ + PK A++ Sbjct: 214 GSHSATGKA--FLQAVAPKIAVI 234 >gi|321469697|gb|EFX80676.1| hypothetical protein DAPPUDRAFT_303870 [Daphnia pulex] Length = 273 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 7/52 (13%) Query: 52 SNTTVIVDTGP-------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +++DTG D VL+EQ ++D +L +H H DH+ G+D ++ Sbjct: 38 GKRRILLDTGDGQVPEYFDLLQSVLKEQQATLDHILVSHWHPDHVGGVDKIQ 89 >gi|313888833|ref|ZP_07822494.1| hydroxyacylglutathione hydrolase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845202|gb|EFR32602.1| hydroxyacylglutathione hydrolase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 229 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 5/44 (11%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKH 117 +D +L TH H DH+ G+D L+ + + VY + ++ Sbjct: 41 RKLDYILLTHKHMDHVGGLDELKIKYGPK-----VYGPRETSEY 79 >gi|168177891|ref|ZP_02612555.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226947783|ref|YP_002802874.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|182670466|gb|EDT82440.1| metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226842399|gb|ACO85065.1| metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] Length = 290 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 ++DTG ++Y + + ID V+ TH H DH G+ Sbjct: 48 GKENYLIDTGWEYYSGKILSYLNSNNIDKIDGVILTHYHDDHYGGL 93 >gi|114800376|ref|YP_760465.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] gi|114740550|gb|ABI78675.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] Length = 565 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 IDAV TH H DHI + L K +YA P + + Sbjct: 74 HIDAVFLTHAHEDHIGAVGLLYP---MLKTKAPIYATPFTCELVRSKMD 119 >gi|332159620|ref|YP_004424899.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2] gi|331035083|gb|AEC52895.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2] Length = 651 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 66/202 (32%), Gaps = 44/202 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + V+VD G P+F VLRE + +DA++ Sbjct: 202 RSALLVQT-----DESFVLVDFGINVAALNDPYKAFPHFDAPEFQY-VLREGL--LDAII 253 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH + L Y L +Y P + + + P+ P Sbjct: 254 ITHAHLDHSGMLPYLFRYNLFDG---PIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRP 310 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVNA 189 I+ G V + P ++ H LG N+A D Sbjct: 311 RDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGNGLHNIAITGDFKF 370 Query: 190 FP----AESLEKLQNLDFLIID 207 P + + L+ L+++ Sbjct: 371 IPTRLLEPANARFPRLETLVME 392 >gi|296088547|emb|CBI37538.3| unnamed protein product [Vitis vinifera] Length = 558 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 53/174 (30%), Gaps = 48/174 (27%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH GI Y +Y+ + + + LDD + I Sbjct: 61 FLTHAHKDHSSGISTHSAY--------PIYSTHLTKTLILQQYP----QLDDSLFVGI-- 106 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGNVAYCTDVNAFPAESL 195 + + G H + + F FGN+ + D P Sbjct: 107 -----EVGQSMVVDDPDGRFGVTAFDANHCPGAVM-FLFEGDFGNILHTGDCRLIPE--- 157 Query: 196 EKLQNL----------------DFLIIDAL--KNGLH--SSHFSLSESLKKIEL 229 LQNL D++ +D ++ LH S H ++ + + I Sbjct: 158 -CLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWK 210 >gi|260663635|ref|ZP_05864524.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum 28-3-CHN] gi|260551861|gb|EEX24976.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum 28-3-CHN] Length = 599 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L++ I V TH HAD I + YFL + + VY + + Sbjct: 55 LQDHADQIKGVFLTHGHADAIGAL----PYFLADFK-VPVYGSQLTIALAK------LAV 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +++ + V++ G + H +LG G++ Y Sbjct: 104 KENKQVKKFNDFHVVDE-----TKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|308513338|ref|NP_954154.2| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|41152918|gb|AAR36504.2| metallo-beta-lactamase family protein [Geobacter sulfurreducens PCA] gi|298507141|gb|ADI85864.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter sulfurreducens KN400] Length = 561 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLR 96 ++ D G F Q+L RE+ + +L TH H DHI + Sbjct: 33 EHGEDIIVADCGLMFPEPQMLGIDLVIPDITYLRERAGRVRGILLTHGHEDHIGALP--- 89 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 ++ Q+ + +Y + + E Sbjct: 90 --YVLQELSLPLYGTALTLGFIREK 112 >gi|57641363|ref|YP_183841.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus kodakarensis KOD1] gi|57159687|dbj|BAD85617.1| cleavage and polyadenylation specficity factor subunit homolog [Thermococcus kodakarensis KOD1] Length = 648 Score = 45.1 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 46/203 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + V+VD G P+F VL E + +DA++ Sbjct: 199 RSALLVQT-----DESYVLVDFGVNIAALKDPTKAYPHFDAPEFRY-VLDEGL--LDAII 250 Query: 81 YTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH + Y + K +Y P + + + P+ Sbjct: 251 ITHAHLDHSG----MLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIEIQHMNGVEPLYR 306 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVN 188 P I+ G V + P ++ H LG N+A D Sbjct: 307 PKDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSSIVHLHIGNGLHNIAITGDFK 366 Query: 189 AFP----AESLEKLQNLDFLIID 207 P ++ + L+ L+++ Sbjct: 367 FIPTRLFEPAVSRFPRLETLVME 389 >gi|327269811|ref|XP_003219686.1| PREDICTED: beta-lactamase-like protein 2-like [Anolis carolinensis] Length = 288 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +SI +L TH H DH GI + Sbjct: 39 GPRRILIDTGEPSIPEYISCLKQALTEFSISIQEILVTHWHPDHTGGIPDI 89 >gi|284165994|ref|YP_003404273.1| beta-lactamase [Haloterrigena turkmenica DSM 5511] gi|284015649|gb|ADB61600.1| beta-lactamase domain protein [Haloterrigena turkmenica DSM 5511] Length = 374 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 19/198 (9%) Query: 52 SNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 TV++DTG + E + ID ++ TH HADHI G + +F ++ Sbjct: 64 DGETVLIDTGIWQADGQGVIDYLEGEGIERIDHLVTTHGHADHIGGHAAVIEHFEERGEG 123 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + P ++ A+++ V + +P+ +S + P Sbjct: 124 VGAVYDPGV-ASTSATYDNYLDAIEEHEVR---LLKVAAGDHLPLEDESVDATVLNPPGD 179 Query: 166 QQHGRISS----LGFRFGNVAYCTDVNAFPAESLEKL--QNLDFLIIDALKNGLHSSHFS 219 G I + L +G +Y T + +L + D L DA + G H S S Sbjct: 180 DDGGSIDAYSTVLSVEYGEFSYLT-TGDIEDGAERRLVDERGDALAADAYQAGHHGS--S 236 Query: 220 LSESLKKIELINPKNAIL 237 S + ++ ++P+ A++ Sbjct: 237 TSSTAPFLDAVDPEIAVI 254 >gi|118443811|ref|YP_878651.1| ComE-like protein [Clostridium novyi NT] gi|118134267|gb|ABK61311.1| comE-like protein, Metallo beta-lactamase superfamily hydrolase [Clostridium novyi NT] Length = 289 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +N T+++D G + + + ++ V+ THPH DHI G+ ++ PID Sbjct: 62 NNKTLLIDAGCPNRKVYNYLKKCGIKKLNYVIATHPHDDHIGGMP-----YIIHSFPIDK 116 Query: 109 YAAPD 113 + AP Sbjct: 117 FLAPK 121 >gi|304315326|ref|YP_003850473.1| metal-dependent RNase [Methanothermobacter marburgensis str. Marburg] gi|302588785|gb|ADL59160.1| predicted metal-dependent RNase [Methanothermobacter marburgensis str. Marburg] Length = 636 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 19/108 (17%) Query: 19 PRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF----------YMQV 68 P+ DW RS L + N+ V++D G + Y+ V Sbjct: 173 PKYENDWARLTAMGGFREVGRSCLYLQTP-----NSRVLLDCGVNVAGGDDRNSYPYLNV 227 Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + S+DAV+ TH H DH Y VY Sbjct: 228 PEFTLDSLDAVIITHAHLDHSG----FLPYLYHYGYDGPVYCTAPTRD 271 >gi|297626066|ref|YP_003687829.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921831|emb|CBL56391.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 773 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSER----GSNTTVIVDTGPD-- 63 LGC A GV I W P P++ + S + + G ++VDTGP+ Sbjct: 486 LGCLALAGVMVIACLWRPPLPGWPRDWQV-VSCDVGQGDATLIRTGPRAAIVVDTGPEPD 544 Query: 64 -FYMQVLREQVLSIDAVLYTHPHADHIHG 91 + V ++ ++ TH HADHI G Sbjct: 545 AMAACLTTAGVDTVPLLVLTHFHADHIDG 573 >gi|222151435|ref|YP_002560591.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] gi|222120560|dbj|BAH17895.1| metallo-beta-lactamase superfamily protein [Macrococcus caseolyticus JCSC5402] Length = 206 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 24/156 (15%) Query: 38 TRSSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T + +IVD G D + + + VL TH H DHI +D + Sbjct: 13 TNCYIL------ENEQEILIVDPGNEADRLIDAIGNTDKKVSGVLLTHAHFDHIGAVDAI 66 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y+ +VY + + + F K D+ + P +++ P + + Sbjct: 67 CSYY-----QCEVYMSQ-----IEKYFLTDPLKNGSDKFSQYGIEPTIVK--QQPKFLDN 114 Query: 155 AGGVIEAIPILQQHGRISSLG---FRFGNVAYCTDV 187 I +H S G F F N A D Sbjct: 115 GFHQIGTFSFEVRHTPGHSPGSLSFIFKNFAIVGDT 150 >gi|56963978|ref|YP_175709.1| zinc-dependent hydrolase [Bacillus clausii KSM-K16] gi|56910221|dbj|BAD64748.1| beta-lactamase superfamily Zn-dependent hydrolase [Bacillus clausii KSM-K16] Length = 555 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +++D G F L E + ++ TH H DHI G+ Y Sbjct: 30 DEDIIVIDAGLMFPDDDMLGVDIVIPDVSYLVENEERVRGIILTHGHEDHIGGL----SY 85 Query: 99 FLKQKRPIDVYAAPDCM 115 LK K + VYA + Sbjct: 86 VLK-KINVPVYATKLTL 101 >gi|124267715|ref|YP_001021719.1| hydroxyacylglutathione hydrolase [Methylibium petroleiphilum PM1] gi|124260490|gb|ABM95484.1| Hydroxyacylglutathione hydrolase [Methylibium petroleiphilum PM1] Length = 259 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + ++VD G + L E+ L + A++ TH H DH+ G+D LR V Sbjct: 18 HDGVSAIVVDPGEAAPVTRALDERSLKLAAIVVTHHHGDHVGGVDALRA--RLPDGRGPV 75 Query: 109 YAAPD 113 Y Sbjct: 76 YGPAR 80 >gi|320546522|ref|ZP_08040837.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] gi|320448907|gb|EFW89635.1| metallo-beta-lactamase superfamily protein [Streptococcus equinus ATCC 9812] Length = 553 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + + TH HAD I + + F V+ +P ++ L + F Sbjct: 55 LIENKKRVQGIFLTHGHADAIGALPYILSEFKA-----PVFGSPLTIE-LAKLF-----V 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + N VI+ + I A H SLG GN+ Y Sbjct: 104 KNSTNVKKFNNFHVIDA-ETEIEFADA----TISFFKTTHSVPESLGIVVGTDEGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|253996210|ref|YP_003048274.1| beta-lactamase domain-containing protein [Methylotenera mobilis JLW8] gi|253982889|gb|ACT47747.1| beta-lactamase domain protein [Methylotenera mobilis JLW8] Length = 453 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 31/128 (24%), Gaps = 40/128 (31%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-- 61 T LG G G S+ + + ++VD G Sbjct: 1 MELTFLGATGTVTG---------------------------SKYLLKSGDKQILVDCGLF 33 Query: 62 PDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 LR IDAV+ TH H DH +K VY + Sbjct: 34 QGLKQLRLRNWAKLPVNPAQIDAVVLTHAHIDHSG----YLPVLVKNGFAGKVYCSEGTA 89 Query: 116 KHLFESFR 123 Sbjct: 90 DLCKIMLP 97 >gi|237751434|ref|ZP_04581914.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372800|gb|EEO23191.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 736 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 23/130 (17%) Query: 45 SRVSERGSNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S E +++ PDF Y+Q ++ ++ AV+ TH H DHI + YF KQ Sbjct: 183 SFPDESMPGVDILI---PDFHYIQSIKNKIA---AVVITHAHEDHIGAV----PYFYKQF 232 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + +Y P + + F ++ + I P+ + G E Sbjct: 233 Q-FPLYGTPLALGLVGNKF-------EEHGLKQYKSLFHIVEKRSPVRI----GDFEIEW 280 Query: 164 ILQQHGRISS 173 I H I S Sbjct: 281 IHITHSIIDS 290 >gi|220912820|ref|YP_002488129.1| ribonuclease Z [Arthrobacter chlorophenolicus A6] gi|219859698|gb|ACL40040.1| Ribonuclease Z [Arthrobacter chlorophenolicus A6] Length = 298 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 74/278 (26%), Gaps = 66/278 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LG + VP T N L + ++ D G Sbjct: 3 ELVVLGT--ASQVP---------TRTRNHNG----YLLL------WDGEGLLFDPGEGTQ 41 Query: 66 MQVLREQVL--SIDAVLYTHPHADHIHGIDGL--RGYFLKQKRPIDVYAAPDCMKHLFES 121 Q++ V + + TH H DH G+ G+ R P+ ++ + Sbjct: 42 RQMIHAGVSATQVTRICLTHVHGDHCFGLPGVLSRMVLDGVNHPVHLHYPAAGEDVVRAL 101 Query: 122 FRYCFKALDDRTYPP----------IVNPIVIENNDVPICMKSAGGVIEAIPILQ----- 166 LD + +P + P+ + GG +P L Sbjct: 102 VSVSTPGLDLKLHPHGAAGEVADGLHIRPLKHRIETYGYRLTEPGGR-TFLPHLLAAAGI 160 Query: 167 ---QHGRISSLGFRFG-------------NVAYCTDVNAFPAESLEKLQNLDFLII---- 206 GR+ G G A+ D + D L+ Sbjct: 161 AGPDVGRLRREGALAGVGLADVSVPRPGQRFAFVMDTAPCDGAE-DLADGADLLVAESTF 219 Query: 207 ---DALKNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 D G + H + ++ + + +LTH Sbjct: 220 SDDDGGLAGEYR-HLTAGQAGDLAGRGSVRTLVLTHFS 256 >gi|145244873|ref|XP_001394706.1| metallo-beta-lactamase domain protein [Aspergillus niger CBS 513.88] gi|134079398|emb|CAK40779.1| unnamed protein product [Aspergillus niger] Length = 317 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 8/52 (15%) Query: 55 TVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++DTG Q+ + I VL TH H DH G+ L Y Sbjct: 63 RILIDTGQGEASWIEALTKQLEANGL-EISHVLLTHWHGDHTGGVPDLITYN 113 >gi|125623377|ref|YP_001031860.1| Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris MG1363] gi|124492185|emb|CAL97114.1| Putative Zn-dependent hydrolase of metallo-beta-lactamase superfamily [Lactococcus lactis subsp. cremoris MG1363] gi|300070125|gb|ADJ59525.1| Zn-dependent hydrolase [Lactococcus lactis subsp. cremoris NZ9000] Length = 210 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Query: 54 TTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +I+D G D ++ L+ ++ A+L TH H DHI G++ L+ YF +Y Sbjct: 23 SYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHIMGLNDLKKYFPSA----PIYL 77 >gi|159899290|ref|YP_001545537.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892329|gb|ABX05409.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 367 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I ++D G D + ++ + ID ++ +HPHADHI G+ + Sbjct: 125 SILIQTPQ----GMNALIDGGYDNGLALEYLHQQGIQRIDHMIVSHPHADHIGGLVEV 178 >gi|159896581|ref|YP_001542828.1| beta-lactamase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889620|gb|ABX02700.1| beta-lactamase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 333 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 68/242 (28%), Gaps = 52/242 (21%) Query: 79 VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA----PDCMKHLFESFRYCFKALDDRTY 134 +L++H H DH G + + ++ D + L ++ + Sbjct: 71 ILFSHMHHDHTQGFPFFTP-AYRGDTNMHIFGPGIFERDLEETLAKTMLPPVFPVSMAEL 129 Query: 135 PPIVNPIVIENNDVPICMKSAGGV-----------------IEAIPILQQHGRISSLGFR 177 P I DV + ++ GG I + L +R Sbjct: 130 PAQKIVSSIRETDVLLLSEAVGGAMLRNRFHDNLSDIDENMIVIKALRSYAHPDGVLVYR 189 Query: 178 FG----NVAYCTDVNAF---PAESLEKLQNLDFLIIDALKNGLHS-------------SH 217 +V Y TD + + Q D LI DA H H Sbjct: 190 IEWQGMSVVYATDTEGYINGDQRLAQFAQGADVLIHDAQYTEEHYLGKAPGFGSTQGWGH 249 Query: 218 FSLSESLKKIELINPKNAILTHMHVDLDY--------DMVLKSTPSRVVPAFDGMQFSSP 269 + + + + +L H + Y + KS + V A +G++ Sbjct: 250 STATMACDVAKSAKVGTLVL--FHHEPTYGDDVIETIENHAKSMFAGAVAAREGLELVLN 307 Query: 270 IP 271 P Sbjct: 308 QP 309 >gi|325095310|gb|EGC48620.1| metallo-beta-lactamase [Ajellomyces capsulatus H88] Length = 310 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Query: 53 NTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++DTG + L+ + +I VL TH H DH+ G+ L Sbjct: 59 HERILIDTGEGRPSWTENLKAALKNENATIKTVLLTHWHRDHVGGVPDLLKVC 111 >gi|270157608|ref|ZP_06186265.1| 3',5'-cyclic-nucleotide phosphodiesterase [Legionella longbeachae D-4968] gi|289164018|ref|YP_003454156.1| 3',5'-cyclic-nucleotide phosphodiesterase precursor (CpdP) [Legionella longbeachae NSW150] gi|269989633|gb|EEZ95887.1| 3',5'-cyclic-nucleotide phosphodiesterase [Legionella longbeachae D-4968] gi|288857191|emb|CBJ11009.1| putative 3',5'-cyclic-nucleotide phosphodiesterase precursor (CpdP) [Legionella longbeachae NSW150] Length = 327 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 21/136 (15%) Query: 67 QVLREQV------LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Q LR + +I A L +H H DH+ G+ + +Q+ + A + M L + Sbjct: 71 QSLRHKNVADLLQKNIPAYLISHAHLDHLMGLVMAQPELREQQT---IMAREETMLALQK 127 Query: 121 SFRYCFK-----ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 Y F DR P +N + + + + HG ++S Sbjct: 128 ---YIFNWSVWGNFGDRGEIPHLNFQHYQTMALLEWVAIPNTDLHVKVFPLSHGGMASSA 184 Query: 176 FRF----GNVAYCTDV 187 F + Y D Sbjct: 185 FLIRYKTEYILYFGDT 200 >gi|237714139|ref|ZP_04544620.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229445963|gb|EEO51754.1| conserved hypothetical protein [Bacteroides sp. D1] Length = 264 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 30/198 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + ++ + +D D+ + Q D +L TH H DH + Sbjct: 66 ASLLLDYAGQK-----IFIDPVSDYADYI---QQPKADFILITHEHGDHF----DTKAIA 113 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + A P+C K L + + + + I +E VP + G Sbjct: 114 AIETNQTKIIANPNCRKMLNRG-----QEMKNGDVLQLAKDIKLEA--VPAYNTTPGRD- 165 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + P + +G I +LG G Y D P L +++++D + + Sbjct: 166 KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LNQVKDIDIAFLPVNQPYT----M 216 Query: 219 SLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 217 TPEQAIRAAKIIKPRVLY 234 >gi|150403348|ref|YP_001330642.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150034378|gb|ABR66491.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 433 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 56/182 (30%), Gaps = 25/182 (13%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + +TV+ D G + +L + D V +H H DH GI L Sbjct: 15 SCVEVKTEKSTVLFDCGVKLSSEESEYPILDNLNADCVFASHAHLDHTGGIP-----VLI 69 Query: 102 QKRPID-VYAAPDC----MKHLFESFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSA 155 +K + +YA + L +S + D Y VN + Sbjct: 70 RKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIPYDKADVNKSLNLFRKARYNHPKN 129 Query: 156 GGVIEAIPILQQH---GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNL-------DFLI 205 E H SL + V Y D L K +L D LI Sbjct: 130 FKDFEFEFFNAGHIPGSSTISLNYSGKRVVYTGDTK-VSDTDLVKGADLSYTKEHIDCLI 188 Query: 206 ID 207 ++ Sbjct: 189 VE 190 >gi|16800541|ref|NP_470809.1| hypothetical protein lin1473 [Listeria innocua Clip11262] gi|16413946|emb|CAC96704.1| lin1473 [Listeria innocua Clip11262] gi|313623781|gb|EFR93914.1| ribonuclease J 2 [Listeria innocua FSL J1-023] Length = 555 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVDAETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIIYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|301766268|ref|XP_002918553.1| PREDICTED: beta-lactamase-like protein 2-like [Ailuropoda melanoleuca] Length = 288 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GTRRILIDTGEPAIPEYISCLKQALTEFNTTIQEIIVTHWHRDHTGGIGDI 89 >gi|148227654|ref|NP_001088412.1| beta-lactamase-like protein 2 [Xenopus laevis] gi|82180328|sp|Q5XGR8|LACB2_XENLA RecName: Full=Beta-lactamase-like protein 2 gi|54261616|gb|AAH84364.1| LOC495268 protein [Xenopus laevis] Length = 287 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 + +++DTG Q L E SI ++ TH H DH+ GI + Sbjct: 40 GSRRILIDTGEPAVPEYISCLKQALIEFNTSIQEIIVTHWHVDHVGGIADI 90 >gi|328951884|ref|YP_004369218.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452208|gb|AEB08037.1| beta-lactamase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 267 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 15/119 (12%) Query: 50 RGSNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 G + ++ DTG D + +DAV +H H DHI G+ Q Sbjct: 59 EGMSKVILFDTGADGNILLGNMRK--IGFNPQKVDAVFLSHVHGDHIGGLQ-----AFLQ 111 Query: 103 KRP-IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + P + VY + ES + P V V ++ + +I+ Sbjct: 112 QNPKVVVYLPASFPASVKESITALGGEFREVAAPQKVFDHVYTTGELGSWIIEQSLIIQ 170 >gi|297156313|gb|ADI06025.1| hypothetical protein SBI_02904 [Streptomyces bingchenggensis BCW-1] Length = 213 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 38/170 (22%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYAAPDCMKHLFESFRYCFKALD 130 DA+L TH H DH D + + +D ++ + + ++F + Sbjct: 37 DAILVTHEHIDHF---DE-----RRLRAALDANPAARIWTLAAVAEQIADAFPGRVHTVG 88 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 + + H I R NV Y D + F Sbjct: 89 EGD---------------TFTAAGFDIEVHGQLHAVIHPDIP----RITNVGYLVDGSLF 129 Query: 191 -PAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 P ++L + ++ L +H+ L+E + + + P AI H Sbjct: 130 HPGDALTVPERP----VETLMLPVHAPWNKLAEIVDYVREVAPSRAIDIH 175 >gi|293400661|ref|ZP_06644806.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305687|gb|EFE46931.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 202 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Query: 51 GSNTTVI-VDTG-PDFYMQ-VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++ V+ +D G +Q + ++ +D ++ TH H DHI G+D L K Sbjct: 20 WNDDHVLVIDPGSKSLRLQEAIDKRNGIVDGIVLTHAHFDHIAGVD-----TLVNKYHCP 74 Query: 108 VYAAP 112 +Y Sbjct: 75 LYMND 79 >gi|282850333|ref|ZP_06259712.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] gi|282579826|gb|EFB85230.1| metallo-beta-lactamase domain protein [Veillonella parvula ATCC 17745] Length = 314 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 32/219 (14%) Query: 57 IVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++DTG + Q+ V + ++ THPHADH+ G F + + + Sbjct: 81 MIDTGDIEHRENIVAQLKTMGVTKLKNIIITHPHADHMGG-------FYAIAKAMPI--- 130 Query: 112 PDCMKH---LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 + + ++ ++ + + D P+ + Sbjct: 131 EHVYDDGIAVDNNMYKTYEKWIEKNKIQRITLRSGDVVDFGHGAVFVVYAPWVEPLTDKK 190 Query: 169 GRIS-----SLG-FRFGNVA--YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 G +G FG + + D + L K QN L LK G H S S Sbjct: 191 GETDLNNNSIVGKLIFGKFSMLFTGDAEWQEEKKLIKEQNSR-LFARILKVGHHGSRTSS 249 Query: 221 SESLKKIELINPKNAILTH-MH--VDLDYDMVLKSTPSR 256 SE ++ I P++A++++ M+ +D+ L+ Sbjct: 250 SE--DFLKSIKPESALISNGMYNKYGHPHDVTLRRLQEN 286 >gi|259046792|ref|ZP_05737193.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] gi|259036560|gb|EEW37815.1| metallo-beta-lactamase superfamily protein [Granulicatella adiacens ATCC 49175] Length = 565 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + + + + +H H DHI GI FL ++ I +YA M + L+ Sbjct: 63 QNINKVKGLFISHGHEDHIGGIP-----FLIKQANIPIYATKLAMSLIRNK-------LE 110 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTD 186 + ++ ++ D +K + H + G GN+ + D Sbjct: 111 EHG---LLRDAILHEIDEDSVIKFRKTQVSF--YRTTHSIPDAFGIVIKTPPGNIVFTGD 165 Query: 187 VN 188 Sbjct: 166 YK 167 >gi|1296970|emb|CAA65179.1| glycosulphatase [Porphyromonas gingivalis] Length = 297 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 77/275 (28%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P SS I + ++D G Q E++ + + +H H Sbjct: 11 CGSALPTTHHHPSSQVIDL-----RDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHLH 65 Query: 86 ADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G L + + V+ E F P V I Sbjct: 66 GDHCFGLPGFISTLGLLGRTGTLHVHGPEG-----IERFLSPILEQFCHRMPYQVEIHTI 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------------ 179 + + + + + +IP+ RI ++G+ F Sbjct: 121 DASRHALVHEDKSVKVYSIPLSH---RIPAVGYLFEEKCRARHLNKAAAEFYNIPLAEYP 177 Query: 180 -----------------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 AYC+D F + +Q +D L +A Sbjct: 178 LIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDT-EFCPSIVPIIQGVDLLYHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTH 239 + H + E+ + K ++ H Sbjct: 237 MEEDRARAKETFHSTAKEAAEIARQAGAKRLLIGH 271 >gi|314925510|gb|EFS89341.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3] Length = 215 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 49/209 (23%) Query: 40 SSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S + + +R ++VD G + + +DA+L TH H DH+ Sbjct: 9 SCILVEAAGQR-----ILVDPGNLSKSWR------GLTDLDAILVTHRHPDHV------- 50 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ + L ++ ++ I ++ + V Sbjct: 51 --------------DPEHIGALVDANSRAVVRAEEGACHEIP---ALDADPVAPGDVLQI 93 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALK 210 G + + H I GNV Y + P + L++ + +D L A Sbjct: 94 GEVRIEAVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA-- 151 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH 239 H+ ++ E++ + ++ L H Sbjct: 152 ---HAPWAAMKETVDFARSVGARHGFLIH 177 >gi|293363663|ref|ZP_06610413.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] gi|292552770|gb|EFF41530.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] Length = 616 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 25/162 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC--- 125 L + ++ + TH H DHI G+ L + K+ ++A +++L F Sbjct: 55 LNQPGKIVEGLFITHGHEDHIGGVVHLVK-QVNVKK---IFAPRIAIQYLQLKFDEHGIN 110 Query: 126 -----FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 F ++ V++ + A G+ P +G + G FRF Sbjct: 111 QKDIKFIEIEKSAVYKFPEGCVVDFWTAQHSIPDAFGIRLTTP----NGSLMCTGDFRFD 166 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSS 216 + TD + E L L+ D A++ S Sbjct: 167 YTPIGNYTDFSRLDQIGKE---GLTVLLSDSTNAMRPFHSPS 205 >gi|291539635|emb|CBL12746.1| Predicted hydrolase (metallo-beta-lactamase superfamily) [Roseburia intestinalis XB6B4] Length = 440 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 26/216 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++++D G + +++ V ++D V+ THP ADHI G+D + F + Sbjct: 115 KCDGHSMLIDAGNNDKGTLVQNYLQHQGVETLDYVIGTHPDADHIGGMDVVLYKFDCKTI 174 Query: 105 PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI--CMKSAGGVIEA 161 + A + ++ + TYP + I I K G + + Sbjct: 175 IMPDVANNTRTYDDVVQTMK---NKGYKTTYPVVGETYTIGGAAFTIIAPNKEYGNDMNS 231 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLHSSHFSL 220 + G + G + D + LQ +D D K H S + Sbjct: 232 WSV----GVLLQNG--NHRFLFTGDAEE--GAEQDILQNGIDI-SADVYKVAHHGS--NT 280 Query: 221 SESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + S ++ ++P A+++ + VL Sbjct: 281 ATSQAFLDAVHPTYAVISAGEGNSYGHPHAEVLNRL 316 >gi|281351674|gb|EFB27258.1| hypothetical protein PANDA_007025 [Ailuropoda melanoleuca] Length = 247 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GTRRILIDTGEPAIPEYISCLKQALTEFNTTIQEIIVTHWHRDHTGGIGDI 89 >gi|260582924|ref|ZP_05850708.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae NT127] gi|260094024|gb|EEW77928.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae NT127] Length = 233 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|242373892|ref|ZP_04819466.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1] gi|242348446|gb|EES40048.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1] Length = 740 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 84/246 (34%), Gaps = 57/246 (23%) Query: 51 GSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 G+N T+++DTG + R+ + +ID ++ THPHADH+ + Sbjct: 484 GNNKTIMIDTGGKGDENKSKSISHHNIAKFKILPSLKRKGISTIDYLILTHPHADHMGEL 543 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLF--------ESFR-YCFKALDDRTYPPIVNPIVI 143 P +HL + F K + + + Sbjct: 544 -------------------PYLFEHLKIKNIILNSDGFPNDLLKYIIKEGKMKNIKIHEV 584 Query: 144 EN-NDVPICMKSAGGVIEAIPI---LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 +N + + + IP + I + +R N+ D L LQ Sbjct: 585 KNISQINFEVTKLKFFNTFIPASSDKNEQSIIILIQYRNKNILLMGDATKNNESIL--LQ 642 Query: 200 NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLDYDMVLKSTPSR 256 N ID LK G H S S SE + ++ I PK ++++ H L D V+ Sbjct: 643 NYKLPKIDILKVGHHGSRTSSSE--EFVKNIQPKISLISSGKHNKYHLPNDDVISRLKEN 700 Query: 257 VVPAFD 262 +D Sbjct: 701 GSEVYD 706 >gi|239627759|ref|ZP_04670790.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239517905|gb|EEQ57771.1| beta-lactamase domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 567 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ +IVD G F + L++ + + + TH H DHI + Sbjct: 43 EDSIIIVDCGLAFPGDDMLGIDLVIPDVSYLKQNIDKVKGFVITHGHEDHIGALP----- 97 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 ++ Q+ + VY + + Sbjct: 98 YILQQINVPVYGTKLTIALIEHK 120 >gi|257413239|ref|ZP_04742444.2| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|257204160|gb|EEV02445.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] Length = 461 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 26/216 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++++D G + +++ V ++D V+ THP ADHI G+D + F + Sbjct: 136 KCDGHSMLIDAGNNDKGTLVQNYLQHQGVETLDYVIGTHPDADHIGGMDVVLYKFDCKTI 195 Query: 105 PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI--CMKSAGGVIEA 161 + A + ++ + TYP + I I K G + + Sbjct: 196 IMPDVANNTRTYDDVVQTMK---NKGYKTTYPVVGETYTIGGAAFTIIAPNKEYGNDMNS 252 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLHSSHFSL 220 + G + G + D + LQ +D D K H S + Sbjct: 253 WSV----GVLLQNG--NHRFLFTGDAEE--GAEQDILQNGIDI-SADVYKVAHHGS--NT 301 Query: 221 SESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + S ++ ++P A+++ + VL Sbjct: 302 ATSQAFLDAVHPTYAVISAGEGNSYGHPHAEVLNRL 337 >gi|293557237|ref|ZP_06675785.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] gi|291600601|gb|EFF30905.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1039] Length = 559 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + I A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKIKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QANIPIYAGPLALALITNK-------LDEHGL-----LRDAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|225556265|gb|EEH04554.1| metallo-beta-lactamase domain-containing protein [Ajellomyces capsulatus G186AR] Length = 309 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Query: 53 NTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + +++DTG + L+ + +I VL TH H DH+ G+ L Sbjct: 58 HERILIDTGEGRPSWTENLKAALKNENATIKTVLLTHWHRDHVGGVPDLLKIC 110 >gi|223982857|ref|ZP_03633078.1| hypothetical protein HOLDEFILI_00352 [Holdemania filiformis DSM 12042] gi|223965179|gb|EEF69470.1| hypothetical protein HOLDEFILI_00352 [Holdemania filiformis DSM 12042] Length = 272 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 42/163 (25%) Query: 54 TTVIVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 T +++D G ++ L+ +A+L TH H DH LK ++ Sbjct: 26 TQIVIDCGTTKTYLTRSFHMIGVDYLNTEALLVTHGHRDHTS--------QLKMFSGVEA 77 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YAA F + ++ P G + P+ H Sbjct: 78 YAA----------FG--------------LENRADQHWIKPYT-PFQVGDLRVTPLPLSH 112 Query: 169 GRISSLGFRF----GNVAYCTDVNAFPAESLEKLQNLDFLIID 207 +++GF + Y TD E + + + D+ +++ Sbjct: 113 DAENTVGFVLETAQEKLVYITDTGYVREECVPLIADADYYVME 155 >gi|303327933|ref|ZP_07358372.1| GAF domain/HD domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861759|gb|EFL84694.1| GAF domain/HD domain protein [Desulfovibrio sp. 3_1_syn3] Length = 661 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 77/258 (29%), Gaps = 43/258 (16%) Query: 44 ISRVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I SE G +I+D G + + ++ + + ++H H DH+ G+ + + Sbjct: 11 IEVRSESGG--RLILDAGTGIHALGDSMDHEIPTDCTICFSHAHWDHLQGLPHFKPLYNP 68 Query: 102 QKR---PIDVYAAPDC--MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 R V A D ++L E F + P + + Sbjct: 69 NWRLSLRGPV-LAEDVPFSQNLLEIFD------EKHFPVPWRELPRRPILEFTPGEQFQV 121 Query: 157 GVIEAIPILQQHGRISSLGFRFG----NVAYCTDV----NAFPAES---LEKLQNLDFLI 205 G + H S +R + + D + L+ + D + Sbjct: 122 GDMTVKTCPTVHPG-SCAAYRIEADGWSFVFTGDHECGDKGDSEATKRLLDFMAGADVAL 180 Query: 206 IDA---LKNGLHS---SHFSLSESLKKIELINPKNAILTH---------MHVDLDYDMVL 250 +D LK+ H +L + + K+ + TH + D Sbjct: 181 VDGHYFLKDYPLHQGWGHSALEQWPALLAGRGVKHLVYTHYDPSYCDRELDKVFDALREN 240 Query: 251 KSTPSRVVPAFDGMQFSS 268 P + GM ++ Sbjct: 241 CRLPISLQLGCQGMLITA 258 >gi|297205848|ref|ZP_06923243.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] gi|297148974|gb|EFH29272.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii JV-V16] Length = 579 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 20/135 (14%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I + TH HAD I + ++ + I+++ + ++ L+ + Sbjct: 62 DKIAGIFLTHGHADSIGALP-----YILRGHDINIFGSELTIE---------LAKLEVQR 107 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA 189 + D + + H SLG G V Y D Sbjct: 108 ENHRRKNHLFHVIDAETEIDFRNASVSF--FHTTHSIPGSLGIVVHTPAGGVVYTGDFKF 165 Query: 190 FPAESLEKLQNLDFL 204 P+ S + ++D L Sbjct: 166 DPSASAQYRTDMDRL 180 >gi|323477437|gb|ADX82675.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4] Length = 638 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHAD 87 RS++ + + V++D G + + E+ + +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPRLDIDQLKIEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|238026774|ref|YP_002911005.1| hydroxyacylglutathione hydrolase [Burkholderia glumae BGR1] gi|237875968|gb|ACR28301.1| Hydroxyacylglutathione hydrolase [Burkholderia glumae BGR1] Length = 268 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query: 59 DTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 D P L + + A+L TH HADH+ G+ L G +Q P+ VY Sbjct: 33 DAAPVRRY--LDARGWRLAAILLTHHHADHVGGVSALVGE-REQIMPVPVYGPA 83 >gi|227484978|ref|ZP_03915294.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus lactolyticus ATCC 51172] gi|227237133|gb|EEI87148.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus lactolyticus ATCC 51172] Length = 558 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 23/96 (23%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY-MQVL------------REQVLSIDAVLYTHPHAD 87 + N +++D G F ++L E + + TH H D Sbjct: 22 CALVEY-----GNDMIMIDCGLTFPNEEMLGVDIVIPDFTYVEENKQKLKGIFVTHGHED 76 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 H+ I YFLK +VY + + F+ Sbjct: 77 HVGAI----PYFLKN-VDTNVYCSKLTKGLIENKFK 107 >gi|254429099|ref|ZP_05042806.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] gi|196195268|gb|EDX90227.1| metallo-beta-lactamase superfamily protein [Alcanivorax sp. DG881] Length = 257 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 53 NTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 + V+VD G + L E L++ A+L TH H DH+ GI L + R I VY Sbjct: 23 DQCVVVDPGDAAPVERYLSENGLTLSALLITHHHPDHVGGI-----AALIRDRDIPVYGP 77 Query: 112 P 112 Sbjct: 78 A 78 >gi|119716543|ref|YP_923508.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614] gi|119537204|gb|ABL81821.1| beta-lactamase domain protein [Nocardioides sp. JS614] Length = 561 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 26/120 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F +R+++ ++A++ TH H DHI Y Sbjct: 40 DGRLLLVDCGVLFPEDHHPGVDLILPDWSSIRDRLDDVEALVLTHGHEDHIG----ATPY 95 Query: 99 FLKQKRPIDVYAAPDCMK---------HLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 L+++ I + + + L E+ + + D + P V N+ +P Sbjct: 96 LLRERGDIPLVGSELTLALLGSKLREHRLRETVHHVVREGDRARFGPFDLEFVAVNHSIP 155 >gi|319782997|ref|YP_004142473.1| RNA-metabolising metallo-beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168885|gb|ADV12423.1| RNA-metabolising metallo-beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 556 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 64/223 (28%), Gaps = 49/223 (21%) Query: 48 SERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDG 94 + +++D G F + + E + ++ ++ TH H DH + Sbjct: 30 GPPSAREWIVIDVGVTFPDASLPGVDLVLPDTRFIEENLANLRGIIITHAHEDHYGALLD 89 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 K V+ P L P + + + K Sbjct: 90 TWP-----KLKAPVWMTPFSAGLLE-------AKRQGEQGAPKIPVTIYRAGE-----KF 132 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------Q 199 G E I H + G V + D P ++ + Sbjct: 133 TVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPKTDEARFRAYGDK 192 Query: 200 NLDFLIID---ALKNGLHSSHFSLSESLK-KIELINPKNAILT 238 + LI D AL+ G S ++ E LK I+ + A+ T Sbjct: 193 GVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTT 235 >gi|262407187|ref|ZP_06083736.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294809682|ref|ZP_06768371.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|262355890|gb|EEZ04981.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294443106|gb|EFG11884.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 255 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 30/198 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + ++ + +D D+ + Q D +L TH H DH + Sbjct: 57 ASLLLDYAGQK-----IFIDPVSDYADYI---QQPKADFILITHEHGDHF----DTKAIA 104 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + A P+C K L + + + + I +E VP + G Sbjct: 105 AIETNQTKIIANPNCRKMLNRG-----QEMKNGDVLQLAKDIKLEA--VPAYNTTPGRD- 156 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + P + +G I +LG G Y D P L +++++D + + Sbjct: 157 KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LNQVKDIDIAFLPVNQPYT----M 207 Query: 219 SLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 208 TPEQAIRAAKIIKPRVLY 225 >gi|239945775|ref|ZP_04697712.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] gi|239992246|ref|ZP_04712910.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 11379] gi|291449231|ref|ZP_06588621.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] gi|291352178|gb|EFE79082.1| beta-lactamase domain-containing protein [Streptomyces roseosporus NRRL 15998] Length = 561 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 26/188 (13%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ + V+ TH H DHI G+ Y L+++R I V + + L + Sbjct: 70 IRDRLDDVVGVVLTHGHEDHIGGV----PYLLRERRDIPVIGSKLTLAFLEAKLKEHHIK 125 Query: 129 L--------DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 + R + P V N+ +P + A ++ G F + Sbjct: 126 PVTVRVKEGERRDFGPFGCEFVAVNHSIPDGLAVAIR--TGAGMVLHTGDFKMDQFPLDD 183 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALK---NGLHSSHFSLSESLKKIELINPKNAIL 237 TD+ AF E +D + D+ G +S L+ +++ + P+ I+ Sbjct: 184 R--ITDLRAFARLGEE---GVDLFLTDSTNAEVPGFTTSERELNPAIEHVMRTAPRRVIV 238 Query: 238 ----THMH 241 +H+H Sbjct: 239 SSFASHVH 246 >gi|227827653|ref|YP_002829433.1| beta-lactamase [Sulfolobus islandicus M.14.25] gi|229584857|ref|YP_002843359.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238619821|ref|YP_002914647.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] gi|227459449|gb|ACP38135.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25] gi|228019907|gb|ACP55314.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27] gi|238380891|gb|ACR41979.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4] Length = 638 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHAD 87 RS++ + + V++D G + + E+ + +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPRLDIDQLKIEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|168186421|ref|ZP_02621056.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] gi|169295541|gb|EDS77674.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] Length = 289 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 8/55 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 S+ + +N +++D G L++ V ++ V+ THPH DHI G+ Sbjct: 56 SILVQF-----NNKNLLIDAGCSNRKVHNYLKKCGVKKLNYVIATHPHDDHIGGM 105 >gi|29347334|ref|NP_810837.1| putative metal-dependent hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|253570434|ref|ZP_04847842.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29339234|gb|AAO77031.1| putative metal-dependent hydrolase [Bacteroides thetaiotaomicron VPI-5482] gi|251839383|gb|EES67466.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 255 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 30/194 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL I ++ V D DF Q D +L TH H DH + Sbjct: 57 ASLLIEYAGKKFFVDPV-SDYA-DFTQQ------PKADYILITHEHHDHF----DTKAIA 104 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + A P+C K L + K D P I+ VP + G Sbjct: 105 AIETPDTKIIANPNCQKMLDK--GQAMKNGDILQITP-----EIKLEAVPAYNTTPGRD- 156 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + P + +G I ++G G Y D P +++++N+D + + Sbjct: 157 KFHPKGRDNGYILTVG---GTRIYIAGDTEDIPE--MKQIKNIDIAFLPVNQPYT----M 207 Query: 219 SLSESLKKIELINP 232 + ++++ + I P Sbjct: 208 TPEQAIQSAKTIQP 221 >gi|84387654|ref|ZP_00990671.1| hypothetical protein V12B01_09291 [Vibrio splendidus 12B01] gi|84377499|gb|EAP94365.1| hypothetical protein V12B01_09291 [Vibrio splendidus 12B01] Length = 456 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 18/81 (22%) Query: 50 RGSNTTVIVDTG--------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 R S V++D G D + + ++A+L TH H DHI + L Sbjct: 20 RDSGQAVLIDCGLFQGLDLQSKKLQGADTRPLDIEFETSHLNALLLTHTHIDHIGRLPWL 79 Query: 96 RGYFLKQKRPIDVYAAPDCMK 116 Q +Y + Sbjct: 80 LASGFNQ----PIYCTQATAE 96 >gi|330795681|ref|XP_003285900.1| hypothetical protein DICPUDRAFT_94050 [Dictyostelium purpureum] gi|325084139|gb|EGC37574.1| hypothetical protein DICPUDRAFT_94050 [Dictyostelium purpureum] Length = 799 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 44/245 (17%) Query: 52 SNTTVIVDTGPDFYMQV--------LREQVLSIDAVLYTHPHADHIHGIDGL----RGYF 99 +++D G + Q+ L+++++++ + +H HADH GI L + Sbjct: 459 DGKNLLLDAGESTFGQLYRFFGPNKLKKELINLRMIWLSHLHADHHLGIPNLIEKREQFA 518 Query: 100 LKQKRPI-DVY--AAPDCMK---HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + I +Y +K L F + P + + E + M Sbjct: 519 KELGVEIQPIYIIGPEPLIKWVTELSSILPMKFVGIAIGKDCPDLYKVSKELDIKTFSM- 577 Query: 154 SAGGVIEAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLEKL-QNLDFLIID 207 + H + G ++Y D P + L ++ + LI + Sbjct: 578 ----------VPVIHCN-QAFGCVIEWNDGFKMSYSGDTR--PCKFLSEMGKGSSVLIHE 624 Query: 208 ALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAF 261 A + H ++ E+L+ +N ++LTH + S A Sbjct: 625 ATFEDEKQNDAVSKRHSTVGEALQVSRDMNCSFSLLTHFSQRYPNLKMGTYQDSNYGLAI 684 Query: 262 DGMQF 266 D +Q Sbjct: 685 DLLQI 689 >gi|323474709|gb|ADX85315.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A] Length = 638 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHAD 87 RS++ + + V++D G + + E+ + +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPRLDIDQLKIEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|307106204|gb|EFN54451.1| hypothetical protein CHLNCDRAFT_31874 [Chlorella variabilis] Length = 781 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 96/311 (30%), Gaps = 69/311 (22%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 + + T LG GA++ P R + L ++ G +++D G Sbjct: 460 RSEFEVTFLGTGAAV----------------PSKYRNVTGLHLNLFDRGG----LLMDCG 499 Query: 62 PDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGY--------------- 98 Y Q+ R V ++ + +H HADH G+ L Sbjct: 500 EGSYGQLKRRFGSAAADDLVCALQCIWISHIHADHHVGLPTLLAARTRLLGPECPPLLVL 559 Query: 99 -FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 +R + YA ++ + F + P+ E + + G Sbjct: 560 GPRPLRRALQGYAQ---LEPMRFRFVEASATAGQPPGAHTLPPVAPEARAAVDAVVAGLG 616 Query: 158 VIEAIPILQQH-------------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 + +L H G S G R+ + + D P +E + Sbjct: 617 LCRFESVLVAHCAHAYGLVLERDTGSTSGEGTRW-KLVFSGDTRPCPQL-VEAARGATLF 674 Query: 205 I-----IDALKNGLHSS-HFSLSESLKKIELINPKNAILTHMHVDLDY-DMVLKSTPSRV 257 I D+L + H + SE+++ +LTH +V ++ V Sbjct: 675 IHEATFEDSLAEEAEAKRHCTTSEAVQAGAQAGAYRTLLTHFSQRYPKIPVVDQNFQGTV 734 Query: 258 VPAFDGMQFSS 268 AFD M + Sbjct: 735 GIAFDLMSVNL 745 >gi|255527850|ref|ZP_05394698.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296185451|ref|ZP_06853861.1| hypothetical protein CLCAR_0874 [Clostridium carboxidivorans P7] gi|255508461|gb|EET84853.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296050285|gb|EFG89709.1| hypothetical protein CLCAR_0874 [Clostridium carboxidivorans P7] Length = 555 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 18/80 (22%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 30 NDIVVIDCGLSFPDDEMLGIDLVIPDITYLQKNIEKVKGIFLTHGHEDHIGAL----PYV 85 Query: 100 LKQKRPIDVYAAPDCMKHLF 119 LK+ + VY + + Sbjct: 86 LKEMN-VPVYGTKLTLGIIQ 104 >gi|229579166|ref|YP_002837564.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|229582079|ref|YP_002840478.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284997854|ref|YP_003419621.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] gi|228009880|gb|ACP45642.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14] gi|228012795|gb|ACP48556.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51] gi|284445749|gb|ADB87251.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5] Length = 638 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHAD 87 RS++ + + V++D G + + E+ + +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPRLDIDQLKIEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|42523510|ref|NP_968890.1| beta-lactamase family exonuclease [Bdellovibrio bacteriovorus HD100] gi|39575716|emb|CAE79883.1| predicted exonuclease of the beta-lactamase family [Bdellovibrio bacteriovorus HD100] Length = 452 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 ++T ++VD G + LRE I AV+ TH H DH + +K+ Sbjct: 22 NDTRILVDCGMFQGFKELRELNWEDFPFDPRDIQAVVLTHAHLDHCGAL----PLLVKKG 77 Query: 104 RPIDVYAAPDCMK 116 +Y ++ Sbjct: 78 FKGPIYCTEPTLE 90 >gi|326917740|ref|XP_003205154.1| PREDICTED: beta-lactamase-like protein 2-like [Meleagris gallopavo] Length = 288 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Query: 54 TTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +SI +L TH H DH GI + Sbjct: 41 RRILIDTGEPAIPEYIGCLKQALSEFNISIQEILVTHWHRDHTGGIPDI 89 >gi|289434718|ref|YP_003464590.1| metallo-beta-lactamase superfamily protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170962|emb|CBH27504.1| metallo-beta-lactamase superfamily protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 555 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E I A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRIKAIFLTHGHEDAIGALP-----YLLQKVKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHIVDAETTLSFAKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|295677147|ref|YP_003605671.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1002] gi|295436990|gb|ADG16160.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1002] Length = 263 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Query: 51 GSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 V+VD G L ++ + A+L TH H DH+ G+ L + + V Sbjct: 22 DGRHAVVVDPGEAAPVRA-CLAQRGWRLSAILLTHHHQDHVGGVADLL-----NGQDVPV 75 Query: 109 YAAP-DCMKHLFES 121 Y + + L Sbjct: 76 YGPASEAIARLTHR 89 >gi|317497452|ref|ZP_07955772.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895238|gb|EFV17400.1| metallo-beta-lactamase superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 554 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 29/110 (26%) Query: 36 RRTRSSLKISRVSERGS----------NTTVIV-DTGPDFYMQ-------------VLRE 71 RR SS+KI + G N +++ D G F + L++ Sbjct: 3 RRKPSSVKIIPLGGLGQIGMNITAFECNNQILIVDCGLAFPDEDMLGIDLVIPDITYLKD 62 Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 I ++ TH H DHI I + +++ + +YA M + Sbjct: 63 NASKIRGLVITHGHEDHIGAIP-----YFEKELNVPIYATKLTMALIENK 107 >gi|284048366|ref|YP_003398705.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] gi|283952587|gb|ADB47390.1| RNA-metabolising metallo-beta-lactamase [Acidaminococcus fermentans DSM 20731] Length = 558 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 20/143 (13%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N ++VD G F L E A+ TH H DHI + Y Sbjct: 33 GNDMILVDAGLAFPDDDMLGIDLVIPDTTFLMENKDKFKAIFLTHGHEDHIGAL----PY 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 +K + VY P + L + + + P I + + Sbjct: 89 VMKDF-DVPVYGTPLTLGILSGRLKENGVSDSKCKMVKPGATVRAGAFRVEFIRVNHSIP 147 Query: 158 VIEAIPILQQHGRISSLG-FRFG 179 A+ I G I G ++F Sbjct: 148 DAVALAIHTPVGVIVHTGDYKFD 170 >gi|241896582|ref|ZP_04783878.1| metallo-beta-lactamase superfamily hydrolase [Weissella paramesenteroides ATCC 33313] gi|241870174|gb|EER73925.1| metallo-beta-lactamase superfamily hydrolase [Weissella paramesenteroides ATCC 33313] Length = 632 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 22/140 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E +I + TH HAD I + L + V+ + ++ + Sbjct: 56 LVEHADNIAGIFLTHGHADAIGALPYLLSEV-----QVPVFGSELTIELAKLAIN----- 105 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ + + ++ N + G + H SLG G V Y Sbjct: 106 -NEASLKDYDDYHIVRGNS-----EVRFGNVTVSFFETTHTIPESLGIVIETAVGQVVYT 159 Query: 185 TDVNAFPAESLEKLQNLDFL 204 D + D L Sbjct: 160 GDFKL--DTTALPYYQTDLL 177 >gi|227830349|ref|YP_002832129.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] gi|227456797|gb|ACP35484.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15] Length = 638 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ-----------VLSIDAVLYTHPHAD 87 RS++ + + V++D G + + E+ + +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPRLDIDQLKIEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|313633250|gb|EFS00117.1| ribonuclease J 2 [Listeria seeligeri FSL N1-067] gi|313637845|gb|EFS03179.1| ribonuclease J 2 [Listeria seeligeri FSL S4-171] Length = 555 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E I A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRIKAIFLTHGHEDAIGALP-----YLLQKVKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHIVDAETTLSFAKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|315282324|ref|ZP_07870757.1| ribonuclease J 2 [Listeria marthii FSL S4-120] gi|313614029|gb|EFR87740.1| ribonuclease J 2 [Listeria marthii FSL S4-120] Length = 555 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+L TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAILLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFAKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|301321262|gb|ADK69905.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 610 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 18/82 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 81 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQKKIKALFITHGHEDHIGGIQ----- 135 Query: 99 FLKQKRPIDVYAAPDCMKHLFE 120 +L Q+ I V AP L Sbjct: 136 YLVQQVKIPVIYAPKLAAMLIR 157 >gi|160883491|ref|ZP_02064494.1| hypothetical protein BACOVA_01460 [Bacteroides ovatus ATCC 8483] gi|156111211|gb|EDO12956.1| hypothetical protein BACOVA_01460 [Bacteroides ovatus ATCC 8483] Length = 298 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 34/200 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +SL + ++ + +D D+ Y Q D +L TH H DH + Sbjct: 100 ASLLLDYAGQK-----IFIDPVSDYADYTQQ-----PKADFILITHEHGDHF----DTKA 145 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + A P+C K L + + + + I +E VP + G Sbjct: 146 IAAIETNQTKIIANPNCRKKLNRG-----QEMKNGDVLQLAKDIKLEA--VPAYNTTPGR 198 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + P + +G I +LG G Y D P L +++++D + + Sbjct: 199 D-KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LNQVKDIDIAFLPVNQPYT--- 249 Query: 217 HFSLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 250 -MTPEQAIRAAKIIKPRVLY 268 >gi|148827029|ref|YP_001291782.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae PittGG] gi|160386345|sp|A5UF43|GLO2_HAEIG RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|148718271|gb|ABQ99398.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae PittGG] Length = 243 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +++AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATVEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|42561197|ref|NP_975648.1| hypothetical protein MSC_0670 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492695|emb|CAE77290.1| Conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 610 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 18/82 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 81 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLAENQKKIKALFITHGHEDHIGGIQ----- 135 Query: 99 FLKQKRPIDVYAAPDCMKHLFE 120 +L Q+ I V AP L Sbjct: 136 YLVQQVKIPVIYAPKLAAMLIR 157 >gi|32475654|ref|NP_868648.1| metal-dependent hydrolase [Rhodopirellula baltica SH 1] gi|32446196|emb|CAD76025.1| conserved hypothetical protein-putative metal-dependent hydrolase [Rhodopirellula baltica SH 1] Length = 268 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 29/167 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ-----VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + V+ D G F R IDA++ +H H DHI + L +K Sbjct: 18 DTGSECVLFDAGISFRKVQTRLNEAGRDASEIDAIVISHDHRDHIGCLG-----VLNRKL 72 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + ++ + ++ P+ I++ IE +P Sbjct: 73 NVPIHISRRTLRSTERR-------------VPLGPVHDIQHFVPGETFTIGETAIETMPT 119 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIID 207 H + F N TD+ + L + LD L I+ Sbjct: 120 P--HDGVDGAAFTLDNGCSRFGLWTDLGCVFDDMLASVNTLDALFIE 164 >gi|307291419|ref|ZP_07571303.1| hypothetical protein HMPREF9509_01728 [Enterococcus faecalis TX0411] gi|306497650|gb|EFM67183.1| hypothetical protein HMPREF9509_01728 [Enterococcus faecalis TX0411] Length = 233 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 63/222 (28%) Query: 51 GSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 N++++++ G Q + +I +L TH H DH I+ + D Sbjct: 20 DGNSSLMLEAGLKPKHIMKQGI--NFSNIQGLLVTHEHGDHSKYINDIL-----LAGRFD 72 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V+A+ ++ L ++ R+ +++ N G P Sbjct: 73 VWASRGTLEGL---------GINRRS-------HILKANQQQ-----KIGDWLVKPFATI 111 Query: 168 HGRISS-----LGFRF-----GNVAYCTDVNAFPAESLEKLQNLDFLIIDA--------- 208 H + LGF + + TD N P +++ +++ Sbjct: 112 HDDKKARAREPLGFLILSPSGKKIVFATDTNYLP----TTFKDVTHWLVECNHDIKLVRQ 167 Query: 209 ------LKNGLHSSHFSLSESLKKIE---LINPKNAILTHMH 241 +++ + +H S+ K + L + L H+ Sbjct: 168 SKLPKSVQDRILRTHMSIDACKKFFQSTDLTKTEEIYLIHLS 209 >gi|292669985|ref|ZP_06603411.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292648397|gb|EFF66369.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 208 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 49 ERGSNTTVIVDTGPD-FYMQVLREQVL-SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + + ++D G + + E+ +I+ +L TH H DHI G+ ++ P Sbjct: 20 DDETKHGFLIDAGAEGDRLAAHAEEKGWTIERLLLTHCHFDHIGGVSD-----FLRRIPC 74 Query: 107 DVYAAPD 113 VYAA D Sbjct: 75 PVYAAED 81 >gi|291535110|emb|CBL08222.1| Predicted hydrolase (metallo-beta-lactamase superfamily) [Roseburia intestinalis M50/1] Length = 440 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 26/216 (12%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++++D G + +++ V ++D V+ THP ADHI G+D + F + Sbjct: 115 KCDGHSMLIDAGNNDKGTLVQNYLQHQGVETLDYVIGTHPDADHIGGMDVVLYKFDCKTI 174 Query: 105 PIDVYA-APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI--CMKSAGGVIEA 161 + A + ++ + TYP + I I K G + + Sbjct: 175 IMPDVANNTRTYDDVVQTMK---NKGYKTTYPVVGETYTIGGATFTIIAPNKEYGNDMNS 231 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ-NLDFLIIDALKNGLHSSHFSL 220 + G + G + D + LQ +D D K H S + Sbjct: 232 WSV----GVLLQNG--NHRFLFTGDAEE--GAEQDILQNGIDI-SADVYKVAHHGS--NT 280 Query: 221 SESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 + S ++ ++P A+++ + VL Sbjct: 281 ATSQAFLDAVHPTYAVISAGEGNSYGHPHAEVLNRL 316 >gi|239617786|ref|YP_002941108.1| beta-lactamase domain protein [Kosmotoga olearia TBF 19.5.1] gi|239506617|gb|ACR80104.1| beta-lactamase domain protein [Kosmotoga olearia TBF 19.5.1] Length = 441 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 60/177 (33%), Gaps = 29/177 (16%) Query: 52 SNTTVIVDTG----PDFYMQVLR-EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + Y + +++ +D V +H H DH+ + L +F + Sbjct: 22 DGKNILIDCGRHPIKEGYESLPAIDEIDKLDYVFISHSHYDHLSSLPHLVKFFPNVR--- 78 Query: 107 DVYAAPDCMK---HLFESFRYCFKALDDRTYPPIVNPI---------VIENNDVPICMKS 154 V + + K + + K +++ PI+ +I S Sbjct: 79 -VLTSRENKKLSVRILRNSVEVMKKKNEKDGEPILYNHSDVKKAKKRMIGVEYYEPFKIS 137 Query: 155 AGGVIEAIPILQQHGRISSLG-FRFGNVAYCTDVN-----AFPAESLEKLQNLDFLI 205 + P G S L ++ + Y D++ P+ L +D LI Sbjct: 138 KKLFVTFYPAGHVMGASSILLEYKGKKIFYTGDISLSDQLTIPSAVLP--DKVDVLI 192 >gi|162146767|ref|YP_001601228.1| beta-lactamase-like protein [Gluconacetobacter diazotrophicus PAl 5] gi|161785344|emb|CAP54891.1| Beta-lactamase-like protein [Gluconacetobacter diazotrophicus PAl 5] Length = 231 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ + GS V+VD G D + L + L++DA+L TH H DH G D LR Sbjct: 30 NCSIL----WDPGSRHAVVVDPGGDVPRLLHELASRDLTVDAILLTHGHLDHAGGADALR 85 Query: 97 G-YFLKQKRPIDVYAAP 112 +Q + V Sbjct: 86 AELSGRQGAAVPVIGPD 102 >gi|327441769|dbj|BAK18134.1| Zn-dependent hydrolase, including glyoxylase [Solibacillus silvestris StLB046] Length = 331 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 14/91 (15%) Query: 44 ISRVSERGSNTTVIVDTG------PDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDG 94 I+ + ++D G F+ + L+E ++ I ++ TH H DHI Sbjct: 27 INCYVYQNGEDYTLIDAGIKNEEFEQFFYRKLKEYNIEINQITRIILTHFHNDHIG---- 82 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 + + PI VYA+ + L Y Sbjct: 83 -VVNQIANEYPIPVYASEIAIPRLKCEDDYL 112 >gi|260589073|ref|ZP_05854986.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|331082503|ref|ZP_08331628.1| hypothetical protein HMPREF0992_00552 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540493|gb|EEX21062.1| metallo-beta-lactamase family protein [Blautia hansenii DSM 20583] gi|330400481|gb|EGG80111.1| hypothetical protein HMPREF0992_00552 [Lachnospiraceae bacterium 6_1_63FAA] Length = 555 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 18/76 (23%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F L+E + + + TH H DHI + Y Sbjct: 30 EDSIIVVDCGLSFPEDDMLGIDLVIPDVTYLKENIDKVKGFVITHGHEDHIGAL----PY 85 Query: 99 FLKQKRPIDVYAAPDC 114 L++ + +YA Sbjct: 86 VLREIN-VPIYATKLT 100 >gi|229178196|ref|ZP_04305567.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus 172560W] gi|228605326|gb|EEK62776.1| Zn-dependent hydrolase (Beta-lactamase superfamily) [Bacillus cereus 172560W] Length = 417 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G + Y ++ E V +DAV +H H DH G+ L Y K+K Sbjct: 18 KNKETKIVFDCGINRSYENSYPKIEGEVVPFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 76 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 77 ---IWTTRYTKEQL 87 >gi|119488239|ref|XP_001262659.1| metallo-beta-lactamase domain protein, putative [Neosartorya fischeri NRRL 181] gi|119410817|gb|EAW20762.1| metallo-beta-lactamase domain protein, putative [Neosartorya fischeri NRRL 181] Length = 298 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 9/150 (6%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL-R 96 T +++ I V + T I D + ++RE+ +D +L TH HADH+ L + Sbjct: 28 TSTAVIIDPVLDYDPATQGITTESADALLSLVREKGYKVDRILETHAHADHLTAASYLQK 87 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +Q + + + K R P + + Sbjct: 88 RLAEEQGHRPPI--------GIGKRIGQVQKLFGQRYGIPAQEYEDVFDKLFEDDETFKI 139 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 G + A I LG+R G+ +C D Sbjct: 140 GNLTAQAIHLPGHTPDHLGYRIGDNIFCGD 169 >gi|87200298|ref|YP_497555.1| beta-lactamase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135979|gb|ABD26721.1| beta-lactamase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 550 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 74/226 (32%), Gaps = 63/226 (27%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F + + E++ + ++ TH H DHI + Sbjct: 28 DGKWLMVDLGMTFADPYYPGIDLVFADLEFIEERLDDLVGIVLTHAHEDHIGAVP----- 82 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + Q + +YA P K + E L + V VI++ D P + G Sbjct: 83 YFAQDLGVPLYATPFTAKLVHEK-------LLEAGIEKEVELNVIDHLD-PFQLGPFG-- 132 Query: 159 IEAIPILQ------------QHGRISSLGF-------RFGNVAYCTDVNAFPAESLEKL- 198 + IP+ HGRI G R G A E L + Sbjct: 133 LRYIPLAHSIAEGNALLIDTPHGRIFHTGDWKLDDEPRIGTPA--------TEEELTAIG 184 Query: 199 -QNLDFLIIDALKNGLHSSHFSLSES-----LKKIELINPKNAILT 238 + + L+ D+ N + + + L+ + + ++T Sbjct: 185 DEGVLALVCDST-NVFNPNPSGSEGAVRAGLLEAVAAQKGRRVVVT 229 >gi|322495148|emb|CBZ30452.1| cleavage and polyadenylation specificity factor,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 756 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 51/190 (26%), Gaps = 37/190 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + V++D G L + ID VL TH H DH Sbjct: 39 RSCVVVRYKG-----RGVMLDCGNHPAKSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGA 93 Query: 92 IDGLRGYFLKQ---KRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 + YF Q K I + K + F D + + Sbjct: 94 L----PYFCNQTSFKGRI--FMTSATKAFYKMVMNDFLRIGAGASDLVTSEWLQSTIDRI 147 Query: 146 NDVPICMKSAGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 V + I P H + G R Y D + P L + Sbjct: 148 ETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVDIAGMR---ALYTGDFSRVPDRHLLGAE 204 Query: 200 ----NLDFLI 205 + D LI Sbjct: 205 VPPYSPDILI 214 >gi|313890144|ref|ZP_07823779.1| ribonuclease J 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121505|gb|EFR44609.1| ribonuclease J 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 553 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E + V +H HAD I + L P+ V+ + ++ L + F Sbjct: 55 LIENKDKVQGVFLSHGHADAIGALPYLLAEV-----PVPVFGSELTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ D ++ G++ H +LG GN+ Y Sbjct: 103 --VKSNNATKKFNNFHIVDSETEIEFRDGLVSF--FSTTHSIPETLGMVIGTDRGNIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|172041147|ref|YP_001800861.1| hypothetical protein cur_1467 [Corynebacterium urealyticum DSM 7109] gi|171852451|emb|CAQ05427.1| conserved hypothetical protein [Corynebacterium urealyticum DSM 7109] Length = 264 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 78/241 (32%), Gaps = 36/241 (14%) Query: 56 VIVDTGPDFYMQVLR-EQVLSID-AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 V+VD G Q+ R E + D V+ +H HADH + L + R +A Sbjct: 28 VVVDLGSGVLKQMQRYEGIDPSDCHVVLSHMHADHCSDVPSLLVW-----RRYHPFAPAS 82 Query: 114 CMKHLFE---SFRYCFKALDDRTYPPIVNPIVIE----------NNDVPICMKSAGGVIE 160 L + ++ +A D P E + D G + Sbjct: 83 TRHKLIGPSIAAKHIGQASADSPEAPDDLTDTFEVLDHVVGPESDFDAETWPHHTIGDLR 142 Query: 161 AIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHS 215 + H + RF + V Y D PA + D L+ +A + Sbjct: 143 IYAVDAIHPT-EAYIIRFEDSSGFSVVYSGDTAPTPALA-RIAAGADVLVCEATWGDGGA 200 Query: 216 S-----HFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPSR----VVPAFDGMQF 266 + H S +E+ + + +LTH+ D + + + A G++ Sbjct: 201 TMPEGMHLSGAEAGEAAQAAGVGRLVLTHIPPWGDKAATVAAAARHYTGPIEVARPGLRI 260 Query: 267 S 267 S Sbjct: 261 S 261 >gi|166368779|ref|YP_001661052.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] gi|166091152|dbj|BAG05860.1| beta-lactamase-like protein [Microcystis aeruginosa NIES-843] Length = 546 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 15/170 (8%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +++D G + + + +D V +H H+DHI G+ L + + VYA+ Sbjct: 39 RLLLDCGLADMQPLTQNKKPPVDLVFCSHAHSDHIRGLMAL----HQTYPQLPVYASEVT 94 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 ++ L + + + I D G + ++ + Sbjct: 95 VQLLPLQWPDSAEEIGSFCQ-GWPWRSPIALFDDLTVEIFPAGHLPGAAVVLFTYKTPK- 152 Query: 175 GFRFGNVAYCTDVN-----AFPAESLEKLQNL--DFLIIDALKNGLHSSH 217 R V Y D + S++ L+ + D LII+ H Sbjct: 153 --RTYKVLYTGDFSLSNFQLVEGLSIDLLRGVSPDVLIIEGSYGTERHPH 200 >gi|29827427|ref|NP_822061.1| hypothetical protein SAV_886 [Streptomyces avermitilis MA-4680] gi|29604526|dbj|BAC68596.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 198 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 36/164 (21%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 DAVL TH HADHI + VYA + L+ P Sbjct: 37 DAVLVTHEHADHI-------DVLRLAGLGVPVYAPAEA----------NIPRLEVTGVP- 78 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAESL 195 E +++ GG I ++ G+ Y D P Sbjct: 79 ----SDAEFTAAGFRVRAVGG--RHAFIYGGQPDCANPGYIIDEAIYHPGDSLHVPE--- 129 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 Q ++ L++ A S +E++ ++ I P+ A H Sbjct: 130 ---QPVETLLVPA-----QGSWMKTAEAIHFVKTIKPQRAFPIH 165 >gi|325262024|ref|ZP_08128762.1| metallo-beta-lactamase family protein [Clostridium sp. D5] gi|324033478|gb|EGB94755.1| metallo-beta-lactamase family protein [Clostridium sp. D5] Length = 382 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G + + ++ + +D V+ THP ADHI G+D + F QK + Sbjct: 61 DGHAMLIDAGNNNKGTAVQSYLQKQGIKKLDYVIGTHPDADHIGGLDVIIYKFDCQKVLL 120 Query: 107 DVY-AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV----PICMKSAGGVIEA 161 Y + + ++ YP + + + + P K + Sbjct: 121 PDYRKNTKTFEEVEDTMN---TKNYKAVYPSVGDTYQLGDAVFTVTAPADKKFDSANDYS 177 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 I + Q+G + D E L++ + D K H S S Sbjct: 178 ISVRLQYGN--------NTFLFVGDAEE--DSEKEMLKSNQEIGADVYKVSHHGSKTGTS 227 Query: 222 ESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 E + +E ++P+ A+++ + VL Sbjct: 228 E--EFLEKVDPQYAVISCGEDNSYGHPHAEVLNLL 260 >gi|323140799|ref|ZP_08075715.1| ribonuclease J 1 [Phascolarctobacterium sp. YIT 12067] gi|322414715|gb|EFY05518.1| ribonuclease J 1 [Phascolarctobacterium sp. YIT 12067] Length = 580 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D G F L E I + TH H DHI + Sbjct: 53 RYGDDMILIDAGLMFPEDDMLGIDLVIPDITYLVENKDKIKGIFLTHGHEDHIGAL---- 108 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y +KQ VY + L Sbjct: 109 PYVMKQIDC-PVYGTALTLGILQGR 132 >gi|319407252|emb|CBI80891.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 558 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 66/231 (28%), Gaps = 63/231 (27%) Query: 47 VSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 + ++VD G PD L + ++ ++ TH H DH Sbjct: 29 FGPKDCREWLLVDMGVSFAGPELPGVDLILPDIR--FLENEKHNVCGLILTHAHEDHYGA 86 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + L K I +Y L + LD I N Sbjct: 87 VLDLWP-----KLKIPIYCTCFTAGLLESK-----RQLD-------FEFHEIPVNIFQSG 129 Query: 152 MKSAGGVIEAIPILQQH--------------GRISSLG-FRFG---NVAYCTDVNAFPAE 193 G I H G + G ++ ++ TD E Sbjct: 130 DCFQIGPFSIEAISVNHSIPEAVSLAITTSLGNVIHTGDWKIDHTPSLGPITD-----EE 184 Query: 194 SLEKLQNLDFLII-----DALKNGLHSSHFSLSESL-KKIELINPKNAILT 238 L N L + +AL++G+ S + +S+ + I + AI T Sbjct: 185 RFRALGNKGVLALLCDSTNALQDGISPSEQQVQKSISEIILKARGRIAITT 235 >gi|292898573|ref|YP_003537942.1| hydroxyacylglutathione hydrolase [Erwinia amylovora ATCC 49946] gi|291198421|emb|CBJ45529.1| probable hydroxyacylglutathione hydrolase [Erwinia amylovora ATCC 49946] Length = 251 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 50 RGSNTTVIVD---TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S +IVD GP +++ A+L TH H DH+ G++ L L + Sbjct: 19 DDSGRCLIVDPGEAGPVLR--AIKQNHWQPQAILLTHHHYDHVGGVEEL----LVHHPDL 72 Query: 107 DVYAAPDCMK 116 VY + Sbjct: 73 IVYGPQETCD 82 >gi|283834152|ref|ZP_06353893.1| metal-dependent hydrolase of the beta-lactamase family protein [Citrobacter youngae ATCC 29220] gi|291070302|gb|EFE08411.1| metal-dependent hydrolase of the beta-lactamase family protein [Citrobacter youngae ATCC 29220] Length = 267 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 17/80 (21%) Query: 35 NRRTRS----SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHA 86 N+ R+ SL + TT++ DTGPD F + + + + AV+ +H H Sbjct: 18 NKSLRAKPGLSLLVQ-----DETTTILFDTGPDNSFILNAAQMGIDLTQLTAVVLSHGHY 72 Query: 87 DHIHGI----DGLRGYFLKQ 102 DH G+ D R Q Sbjct: 73 DHCGGVPWLADNSRIICHPQ 92 >gi|269102152|ref|ZP_06154849.1| 3',5'-cyclic-nucleotide phosphodiesterase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162050|gb|EEZ40546.1| 3',5'-cyclic-nucleotide phosphodiesterase [Photobacterium damselae subsp. damselae CIP 102761] Length = 327 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 46/142 (32%), Gaps = 24/142 (16%) Query: 74 LSIDAVLYTHPHADHIHGI-----DGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRY-CF 126 I +H H DHI G+ D +YA P + + F + + Sbjct: 91 KKIKGYFISHGHLDHIAGLIISSPDDSSK---------TIYALPSVHQTISQHYFNWKAW 141 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA---- 182 ++ +N V+ + G ++ H I S F F N A Sbjct: 142 PNFTNQGEGYKLNKYVLTPLSTSGWQQVKGTELKVKTFPLSHSGIESSAFLFENSAKEAV 201 Query: 183 -YCTDVNAFPAESLEKLQNLDF 203 Y D +S+E Q+LD Sbjct: 202 IYLGDTG---PDSVENSQSLDT 220 >gi|256850966|ref|ZP_05556355.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260661180|ref|ZP_05862094.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|282934119|ref|ZP_06339397.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] gi|256616028|gb|EEU21216.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 27-2-CHN] gi|260548117|gb|EEX24093.1| metallo-beta-lactamase superfamily protein [Lactobacillus jensenii 115-3-CHN] gi|281301733|gb|EFA93999.1| ribonuclease J 2 [Lactobacillus jensenii 208-1] Length = 579 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 20/135 (14%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 I + TH HAD I + ++ ++ I+++ + ++ L+ + Sbjct: 62 DKIAGIFLTHGHADSIGALP-----YILRRHDINIFGSELTIE---------LAKLEVQR 107 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNA 189 + D + + H SLG G V Y D Sbjct: 108 ENHRRKNHLFHVIDAETEIDFRNASVSF--FHTTHSIPGSLGIVVHTPAGGVVYTGDFKF 165 Query: 190 FPAESLEKLQNLDFL 204 P+ S + ++D L Sbjct: 166 DPSASAQYRTDMDRL 180 >gi|156381316|ref|XP_001632211.1| predicted protein [Nematostella vectensis] gi|156219264|gb|EDO40148.1| predicted protein [Nematostella vectensis] Length = 342 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 58/201 (28%), Gaps = 52/201 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG G++ P R S + + + D G Sbjct: 1 MEIHFLGTGSAYPTP----------------HRGASCVILWYNGSCW-----MFDCGEGT 39 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-----IDVYAAPDCMKH 117 Q+ + + I + +H H DH+ G+ GL + P +D+Y K+ Sbjct: 40 QTQLTKSVIKSSKITKIFISHLHGDHVFGLPGLLC-TIGLTAPDENKHVDIYGPVGLRKY 98 Query: 118 LFES---------FRYCFKALD-------------DRTYPPIVNPIVIENNDVPICMKSA 155 L S + Y + D +P I N + Sbjct: 99 LRTSLDLCQSILGYSYAIHEIHTADSTSSQVTAEVDLLHPDENMGREIHENPSGVWEICK 158 Query: 156 GGVIEAIPILQQHGRISSLGF 176 G ++ +H R++ G+ Sbjct: 159 DGDLQVFAAPLKH-RVTCFGY 178 >gi|115496912|ref|NP_001069513.1| beta-lactamase-like protein 2 [Bos taurus] gi|122134264|sp|Q1LZ83|LACB2_BOVIN RecName: Full=Beta-lactamase-like protein 2 gi|94534980|gb|AAI16150.1| Lactamase, beta 2 [Bos taurus] gi|296480551|gb|DAA22666.1| beta-lactamase-like protein 2 [Bos taurus] Length = 288 Score = 44.7 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GPRRILIDTGEPSIPEYISCLKQALTEFNTAIQEIIVTHWHRDHTGGIGDI 89 >gi|300176545|emb|CBK24210.2| unnamed protein product [Blastocystis hominis] Length = 447 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 46/148 (31%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 T G GA P RR +S + + + + + D G + Sbjct: 8 MTFFGTGA----------------MKPSLRRG-TSAMGMFLPTKRGSESWLFDCGEGTFR 50 Query: 67 QV----------------------LREQVLSIDAVLYTHPHADHIHGIDGL-RGYFLK-- 101 Q+ R ++ + TH H DHI G+ + G + Sbjct: 51 QLCIFNKSSKRHIVNKSHLQSLENFRFGCNKLNRIFITHLHGDHIFGLPSVILGINFEKN 110 Query: 102 ----QKRPIDVYAAPDCMKHLFESFRYC 125 ++ PI +Y ++ F C Sbjct: 111 PELLRESPIHLYGPSGLGNYISSCFDVC 138 >gi|269956030|ref|YP_003325819.1| beta-lactamase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269304711|gb|ACZ30261.1| beta-lactamase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 561 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 21/85 (24%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +I+D G PDF +R+++ ++AV+ TH H DHI + Sbjct: 40 DGRLLIIDCGVLFPEDNQPGVDLILPDF--DYIRDRLDDVEAVVLTHGHEDHIGAV---- 93 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y L+ +R I + + + + Sbjct: 94 PYLLRLRRDIPLLGSQLTLAFVEAK 118 >gi|225568637|ref|ZP_03777662.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] gi|225162565|gb|EEG75184.1| hypothetical protein CLOHYLEM_04715 [Clostridium hylemonae DSM 15053] Length = 211 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 16/152 (10%) Query: 38 TRSSLKISRVSERGSNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T L + + T ++D P + M ++ + L I+AVL TH H DHI G+DG Sbjct: 18 TNCYLAV----NEETRQTAVIDPAACPSYLMGHIKSEGLKIEAVLLTHGHFDHIMGLDGF 73 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + VY D + + + ++ + + IE+N+ +K+A Sbjct: 74 LKEY-----DVPVYLHRDDEQLIKD--PGLNQSGVYTSGYTFGSATYIEDNE---TLKTA 123 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 G + + V + D Sbjct: 124 GFEFKVLHTPGHTPGGVCYYAEAEKVLFSGDT 155 >gi|212223311|ref|YP_002306547.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus onnurineus NA1] gi|212008268|gb|ACJ15650.1| cleavage and polyadenylation specficity factor subunit-like protein [Thermococcus onnurineus NA1] Length = 648 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 46/203 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + + V+VD G P+F VL + +DA++ Sbjct: 199 RSALLVQT-----NESYVLVDFGVNIAALRDPKKAFPHFDAPEFRY-VLDAGL--LDAII 250 Query: 81 YTHPHADHIHGIDGLRGYFLKQKR-PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH H DH + Y + K +Y P + + + P+ Sbjct: 251 ITHAHLDHSG----MLPYLFRYKLFDGPIYTTPPTRDLMVLLQQDFIEIQQMNGVEPLYR 306 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVN 188 P I+ G V + P ++ H LG N+A D Sbjct: 307 PRDIKEVIKHTITLDYGEVRDIAPDMRLTLHNAGHILGSSIVHLHIGNGLHNIAITGDFK 366 Query: 189 AFP----AESLEKLQNLDFLIID 207 P ++ + L+ L+++ Sbjct: 367 FIPTRLFEPAVSRFPRLETLVME 389 >gi|145636864|ref|ZP_01792529.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae PittHH] gi|145269945|gb|EDK09883.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae PittHH] Length = 238 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|134045919|ref|YP_001097405.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132663544|gb|ABO35190.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 635 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 60/201 (29%), Gaps = 37/201 (18%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDF---------YMQVLREQVLSIDAVLYT 82 R+S + + + + ++VD G + + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVDDEKAFPHFDAPEFSIEEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRYCFKALDDRTYPPIVNPI 141 H H DH + VY + Y + P + Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKEGKNVPY-SSK 295 Query: 142 VIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRFG---------NVAYCTDV--- 187 I+N G + P ++ H LG NVAY D+ Sbjct: 296 DIKNCIKHTIPLDYGVTTDIAPAIKLTLHNAGHILGSAIAHCHVGEGLYNVAYTGDIKFE 355 Query: 188 -NAFPAESLEKLQNLDFLIID 207 + ++ + L+ LII+ Sbjct: 356 ASRLLEPAVCQFPRLETLIIE 376 >gi|56478358|ref|YP_159947.1| metallo-beta-lactamase superfamily protein [Aromatoleum aromaticum EbN1] gi|56314401|emb|CAI09046.1| Metallo-beta-lactamase superfamily protein [Aromatoleum aromaticum EbN1] Length = 469 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 12/82 (14%) Query: 45 SRVSERGSNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S + +VD G +Q L + +D V+ TH H DH + L Sbjct: 15 SCARVHHAGGMFLVDCGMFQGGRDATRKNLQALDFDLREVDFVILTHAHLDHSGLVPRLV 74 Query: 97 GYFLKQKRPIDVYAAPDCMKHL 118 + K +YA + L Sbjct: 75 SLGYRGK----IYATAATVDLL 92 >gi|47565343|ref|ZP_00236385.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] gi|208742250|ref|YP_002267702.1| hypothetical protein pBC210_00690 [Bacillus cereus] gi|47557697|gb|EAL16023.1| metallo-beta-lactamase superfamily protein [Bacillus cereus G9241] Length = 211 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 52 SNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 VI+D G D Q +++ L A+L TH H DHI +D +R K I +Y Sbjct: 22 DKACVIIDPGGESDKINQYIKKHNLIPKAILLTHAHFDHIGAVDEVRS-----KWNIPLY 76 Query: 110 AAP 112 Sbjct: 77 LHQ 79 >gi|255523362|ref|ZP_05390332.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296188296|ref|ZP_06856688.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255513016|gb|EET89286.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|296047422|gb|EFG86864.1| metallo-beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 273 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFY----MQVLREQ-VLSIDAVLYTHPHADHIHGI 92 N+ ++DTG +Y ++ L + ID V+ TH H DH G+ Sbjct: 44 DNSNYLIDTGASYYSDKILKYLDANEINKIDTVILTHYHDDHYGGL 89 >gi|227329799|ref|ZP_03833823.1| hydroxyacylglutathione hydrolase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 251 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 52 SNTTVIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N VIVD G + L + L +A+L TH H DH+ G+ L L+ + V+ Sbjct: 21 ENRCVIVDPGEAPPVLNALDQHALFPEAILLTHHHNDHVGGVGEL----LRHYPNLPVFG 76 Query: 111 APDCMK 116 + K Sbjct: 77 PKETAK 82 >gi|115361267|ref|YP_778404.1| beta-lactamase domain-containing protein [Burkholderia ambifaria AMMD] gi|115286595|gb|ABI92070.1| beta-lactamase domain protein [Burkholderia ambifaria AMMD] Length = 468 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + V+VD G + + Q L ++DAV+ TH H DH ++ Sbjct: 20 EHGSRRVLVDCGLFQGTKNLRLRNWQPLPLAPDTLDAVVLTHAHLDHSG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 + VY + Sbjct: 76 EGYRGPVYCTAATAE 90 >gi|254818434|ref|ZP_05223435.1| metallo-beta-lactamase superfamily protein, putative [Mycobacterium intracellulare ATCC 13950] Length = 212 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 38/201 (18%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S + T V+ D G + E + + A+L TH H DH+ G L+ Sbjct: 9 SCLLAEFDQTRVLFDPGTFAHG---FEGITGLTAILITHQHPDHVDG--KRLPALLEGNP 63 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALD----DRTYPPIVNPIVIENNDVPIC--MKSAGGV 158 + +YA P L R + + T + + + ++P+ + G Sbjct: 64 DVALYADPQTAAQLGAPCREVHVGDELQIGELTVRALGGKHAVIHPEIPVIENISFLIGD 123 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 E P H D P E +D L A Sbjct: 124 GEH-PARLMHP---------------GDALFVPDE------PVDVLATPAAAPW-----M 156 Query: 219 SLSESLKKIELINPKNAILTH 239 +SE++ + + P A+ H Sbjct: 157 KVSEAVDYLRAVAPARAVPIH 177 >gi|253798166|ref|YP_003031167.1| hypothetical protein TBMG_01223 [Mycobacterium tuberculosis KZN 1435] gi|289553463|ref|ZP_06442673.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|297635361|ref|ZP_06953141.1| hypothetical protein MtubK4_14627 [Mycobacterium tuberculosis KZN 4207] gi|297732358|ref|ZP_06961476.1| hypothetical protein MtubKR_14777 [Mycobacterium tuberculosis KZN R506] gi|313659691|ref|ZP_07816571.1| hypothetical protein MtubKV_14782 [Mycobacterium tuberculosis KZN V2475] gi|253319669|gb|ACT24272.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289438095|gb|EFD20588.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|328457939|gb|AEB03362.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 558 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 21/87 (24%) Query: 50 RGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 +I+D G PD + +++ I+A++ TH H DHI I Sbjct: 35 EHLGRLLIIDCGVLFPGHDEPGVDLILPDMRH--VEDRLDDIEALVLTHGHEDHIGAI-- 90 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFES 121 + LK + I V + + + E Sbjct: 91 --PFLLKLRPDIPVVGSKFTLALVAEK 115 >gi|240127248|ref|ZP_04739909.1| putative hydrolase [Neisseria gonorrhoeae SK-93-1035] gi|268685609|ref|ZP_06152471.1| hydrolase [Neisseria gonorrhoeae SK-93-1035] gi|268625893|gb|EEZ58293.1| hydrolase [Neisseria gonorrhoeae SK-93-1035] Length = 210 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----ETHKVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|221134825|ref|ZP_03561128.1| metallo-beta-lactamase family protein [Glaciecola sp. HTCC2999] Length = 419 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 17/105 (16%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 + ++ TH H DH+ GI Y ++ + +Y + L + L + Sbjct: 40 DQLAGIIITHAHEDHVGGI----PYLWERFKQ-PIYTTKFTAEVLR-------RKLSEVE 87 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + +V+ + IE D + G + H G Sbjct: 88 FGHLVDIVEIEPLD-----EFTIGPFSVKWLPITHSLPEPCGLMI 127 >gi|194036638|ref|XP_001924756.1| PREDICTED: beta-lactamase-like protein 2-like [Sus scrofa] Length = 288 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L+E +I ++ TH H DH GI+ + Sbjct: 39 GPRRILIDTGEPAIPEYISCLKQALKEFNTAIQEIIVTHWHRDHSGGIEDI 89 >gi|209543246|ref|YP_002275475.1| beta-lactamase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530923|gb|ACI50860.1| beta-lactamase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 226 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ + GS V+VD G D + L + L++DA+L TH H DH G D LR Sbjct: 25 NCSIL----WDPGSRHAVVVDPGGDVPRLLHELASRDLTVDAILLTHGHLDHAGGADALR 80 Query: 97 G-YFLKQKRPIDVYAAP 112 +Q + V Sbjct: 81 AELSGRQGAAVPVIGPD 97 >gi|149908877|ref|ZP_01897537.1| hydroxyacylglutathione hydrolase [Moritella sp. PE36] gi|149808151|gb|EDM68092.1| hydroxyacylglutathione hydrolase [Moritella sp. PE36] Length = 258 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 43 KISRVSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + +N IVD G D +QV+ +Q L ++A+L TH H DHI GI + Sbjct: 14 YVWLIKNTENNHCCIVDPGQADPVLQVINQQNLILEAILITHHHYDHIDGISDILNASTN 73 Query: 102 QKRPIDVYAA 111 P+ VY++ Sbjct: 74 ---PVQVYSS 80 >gi|91761981|ref|ZP_01263946.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717783|gb|EAS84433.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 551 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 30/148 (20%) Query: 48 SERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDG 94 + G + ++VD G F L ++ + ++ TH H DHI I Sbjct: 26 GKPGEHKWIMVDIGVTFADDTLPGIDLIYPDPGFIVDKKDDLLGIILTHAHEDHIGAIAH 85 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L + ++A P + E F+ K +D + IV N D Sbjct: 86 LWP-----QLKCKIFATPFTAVLIKEKFKE--KNIDVTKFLKIVQLNGTVNLD------- 131 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVA 182 + I H + G R A Sbjct: 132 ---PFKIEYITLTHSILEPNGLRIETPA 156 >gi|291533903|emb|CBL07016.1| Predicted hydrolase (metallo-beta-lactamase superfamily) [Megamonas hypermegale ART12/1] Length = 119 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 5/44 (11%) Query: 53 NTTVIVDTGP----DFYMQVLRE-QVLSIDAVLYTHPHADHIHG 91 T+++DTG D +++L+E + +ID ++ THPHADH+ G Sbjct: 45 EQTIMIDTGDIDERDNLVKLLKERNITTIDKLIITHPHADHLGG 88 >gi|271501674|ref|YP_003334700.1| hydroxyacylglutathione hydrolase [Dickeya dadantii Ech586] gi|270345229|gb|ACZ77994.1| hydroxyacylglutathione hydrolase [Dickeya dadantii Ech586] Length = 251 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 N VIVD G +Q L LS A+L TH H DH G++ L I + Sbjct: 19 NDENDCVIVDPGDAAPVLQALEHHGLSPAAILLTHHHNDHTGGVEQLAA----HYPDIQI 74 Query: 109 YAAPDCMK 116 Y + + Sbjct: 75 YGPQETKR 82 >gi|257888397|ref|ZP_05668050.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257899230|ref|ZP_05678883.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|293378001|ref|ZP_06624179.1| conserved hypothetical protein [Enterococcus faecium PC4.1] gi|293570376|ref|ZP_06681433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|257824451|gb|EEV51383.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257837142|gb|EEV62216.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com15] gi|291609554|gb|EFF38819.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|292643366|gb|EFF61498.1| conserved hypothetical protein [Enterococcus faecium PC4.1] Length = 559 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKVKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QANIPIYAGPLALALITNK-------LDEHGL-----LREAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|226313456|ref|YP_002773350.1| hypothetical protein BBR47_38690 [Brevibacillus brevis NBRC 100599] gi|226096404|dbj|BAH44846.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 214 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +N T+++D G + Q+LR ++ A+L TH H DHI G++ +R VY Sbjct: 27 TNQTIVIDPGME-PDQLLRALANKNVVAILLTHAHLDHIGGLNQVRELTKA-----PVYI 80 Query: 111 AP 112 P Sbjct: 81 HP 82 >gi|289426238|ref|ZP_06427984.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289426869|ref|ZP_06428595.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|295130303|ref|YP_003580966.1| hypothetical protein HMPREF0675_3796 [Propionibacterium acnes SK137] gi|289153403|gb|EFD02118.1| conserved hypothetical protein [Propionibacterium acnes SK187] gi|289159958|gb|EFD08136.1| conserved hypothetical protein [Propionibacterium acnes J165] gi|291377116|gb|ADE00971.1| conserved hypothetical protein [Propionibacterium acnes SK137] gi|313764765|gb|EFS36129.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1] gi|313772560|gb|EFS38526.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1] gi|313791815|gb|EFS39926.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1] gi|313802098|gb|EFS43330.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2] gi|313809720|gb|EFS47441.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1] gi|313813237|gb|EFS50951.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1] gi|313815830|gb|EFS53544.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1] gi|313818261|gb|EFS55975.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2] gi|313820023|gb|EFS57737.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1] gi|313823168|gb|EFS60882.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2] gi|313825554|gb|EFS63268.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1] gi|313827793|gb|EFS65507.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2] gi|313830630|gb|EFS68344.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1] gi|313833850|gb|EFS71564.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1] gi|313838430|gb|EFS76144.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1] gi|314915257|gb|EFS79088.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4] gi|314918513|gb|EFS82344.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1] gi|314919778|gb|EFS83609.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3] gi|314931792|gb|EFS95623.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1] gi|314956051|gb|EFT00449.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1] gi|314958457|gb|EFT02560.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1] gi|314960304|gb|EFT04406.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2] gi|314963113|gb|EFT07213.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1] gi|314968051|gb|EFT12150.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1] gi|314973632|gb|EFT17728.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1] gi|314976225|gb|EFT20320.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1] gi|314978168|gb|EFT22262.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2] gi|314983566|gb|EFT27658.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1] gi|314987755|gb|EFT31846.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2] gi|314990233|gb|EFT34324.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3] gi|315077577|gb|EFT49635.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2] gi|315080361|gb|EFT52337.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1] gi|315084620|gb|EFT56596.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2] gi|315085956|gb|EFT57932.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3] gi|315088626|gb|EFT60602.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1] gi|315096377|gb|EFT68353.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1] gi|315098235|gb|EFT70211.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2] gi|315101075|gb|EFT73051.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1] gi|315108195|gb|EFT80171.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2] gi|327325888|gb|EGE67678.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA2] gi|327332239|gb|EGE73976.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL096PA3] gi|327442617|gb|EGE89271.1| hypothetical protein HMPREF9568_02570 [Propionibacterium acnes HL013PA2] gi|327445339|gb|EGE91993.1| hypothetical protein HMPREF9571_01977 [Propionibacterium acnes HL043PA2] gi|327447785|gb|EGE94439.1| hypothetical protein HMPREF9570_00616 [Propionibacterium acnes HL043PA1] gi|327451083|gb|EGE97737.1| hypothetical protein HMPREF9581_02418 [Propionibacterium acnes HL087PA3] gi|327452835|gb|EGE99489.1| hypothetical protein HMPREF9584_01256 [Propionibacterium acnes HL092PA1] gi|327453562|gb|EGF00217.1| hypothetical protein HMPREF9586_01518 [Propionibacterium acnes HL083PA2] gi|328753117|gb|EGF66733.1| hypothetical protein HMPREF9579_02181 [Propionibacterium acnes HL087PA1] gi|328753771|gb|EGF67387.1| hypothetical protein HMPREF9563_02114 [Propionibacterium acnes HL020PA1] gi|328759138|gb|EGF72754.1| hypothetical protein HMPREF9588_00290 [Propionibacterium acnes HL025PA2] gi|328760380|gb|EGF73949.1| metallo-beta-lactamase family protein [Propionibacterium acnes HL099PA1] Length = 215 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 49/209 (23%) Query: 40 SSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S + + +R ++VD G + + +DA+L TH H DH+ Sbjct: 9 SCILVEAAGQR-----ILVDPGNLSKSWR------GLTDLDAILVTHRHPDHV------- 50 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ + L ++ ++ I ++ + V Sbjct: 51 --------------DPEHIGALVDANSGAVVRAEEGACHEIP---ALDADPVAPGDVLQI 93 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALK 210 G + + H I GNV Y + P + L++ + +D L A Sbjct: 94 GEVRIEAVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA-- 151 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH 239 H+ ++ E++ + ++ L H Sbjct: 152 ---HAPWAAMKETVDFARSVGARHGFLIH 177 >gi|194099693|ref|YP_002002828.1| putative hydrolase [Neisseria gonorrhoeae NCCP11945] gi|239999883|ref|ZP_04719807.1| putative hydrolase [Neisseria gonorrhoeae 35/02] gi|240015612|ref|ZP_04722152.1| putative hydrolase [Neisseria gonorrhoeae FA6140] gi|240081780|ref|ZP_04726323.1| putative hydrolase [Neisseria gonorrhoeae FA19] gi|240114060|ref|ZP_04728550.1| putative hydrolase [Neisseria gonorrhoeae MS11] gi|240114702|ref|ZP_04728764.1| putative hydrolase [Neisseria gonorrhoeae PID18] gi|240122539|ref|ZP_04735495.1| putative hydrolase [Neisseria gonorrhoeae PID332] gi|254492759|ref|ZP_05105930.1| hydrolase [Neisseria gonorrhoeae 1291] gi|260441490|ref|ZP_05795306.1| putative hydrolase [Neisseria gonorrhoeae DGI2] gi|268595693|ref|ZP_06129860.1| glyoxalase II family protein [Neisseria gonorrhoeae 35/02] gi|268597879|ref|ZP_06132046.1| glyoxalase II family protein [Neisseria gonorrhoeae FA19] gi|268600127|ref|ZP_06134294.1| hydrolase [Neisseria gonorrhoeae MS11] gi|268600348|ref|ZP_06134515.1| hydrolase [Neisseria gonorrhoeae PID18] gi|268681128|ref|ZP_06147990.1| hydrolase [Neisseria gonorrhoeae PID332] gi|291044854|ref|ZP_06570563.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293397932|ref|ZP_06642138.1| hydrolase [Neisseria gonorrhoeae F62] gi|193934983|gb|ACF30807.1| putative hydrolase [Neisseria gonorrhoeae NCCP11945] gi|226511799|gb|EEH61144.1| hydrolase [Neisseria gonorrhoeae 1291] gi|268549082|gb|EEZ44500.1| glyoxalase II family protein [Neisseria gonorrhoeae 35/02] gi|268551667|gb|EEZ46686.1| glyoxalase II family protein [Neisseria gonorrhoeae FA19] gi|268584258|gb|EEZ48934.1| hydrolase [Neisseria gonorrhoeae MS11] gi|268584479|gb|EEZ49155.1| hydrolase [Neisseria gonorrhoeae PID18] gi|268621412|gb|EEZ53812.1| hydrolase [Neisseria gonorrhoeae PID332] gi|291011748|gb|EFE03744.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611878|gb|EFF40947.1| hydrolase [Neisseria gonorrhoeae F62] gi|317165178|gb|ADV08719.1| putative hydrolase [Neisseria gonorrhoeae TCDC-NG08107] Length = 210 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----ETHKVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|59802341|ref|YP_209053.1| putative hydrolase [Neisseria gonorrhoeae FA 1090] gi|59719236|gb|AAW90641.1| putative hydrolase [Neisseria gonorrhoeae FA 1090] Length = 210 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + V + L +S P +E + + Sbjct: 70 ML-----ETHKVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|73662520|ref|YP_301301.1| putative Zn-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495035|dbj|BAE18356.1| putative Zn-dependent hydrolase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 207 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 10/120 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + A+L TH H DHI +D + +K + VY L ++ + + Sbjct: 40 LNQINKPLSAILLTHAHFDHIGALD-----AIVEKYQVPVYMHKAEFDFLTDTQKNGSEK 94 Query: 129 LDDRTYPPIVNPIVIEN-NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 P +++ + ++ + + + + +P H SL F F + A D Sbjct: 95 FKQYGLPQVISSVTPQSLTEGQTNIANFEFNVLHMP---GHSP-GSLTFVFKDFAVVGDT 150 >gi|290559801|gb|EFD93125.1| beta-lactamase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 629 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 17/88 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF--------YMQVLREQVLSIDAVLYTHPHADHIH 90 RS++ + ++V++D G D + + ++AV+ TH H DH Sbjct: 189 RSAVLVQTP-----ISSVLLDAGVDVSNSREPVPRVDAPEFDISKLNAVVITHSHLDHCG 243 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 K VY+ + Sbjct: 244 ----FLPVLYKYGYKGPVYSTAPTRDVM 267 >gi|254852061|ref|ZP_05241409.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] gi|258605357|gb|EEW17965.1| metallo-beta-lactamase [Listeria monocytogenes FSL R2-503] Length = 515 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + AV TH H D I + +L QK VY + Sbjct: 15 PDFKY--LEENKDRVKAVFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 67 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 68 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 125 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 126 KFDQSAKDGYASDLSHIAE 144 >gi|119511400|ref|ZP_01630512.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414] gi|119463945|gb|EAW44870.1| Beta-lactamase-like protein [Nodularia spumigena CCY9414] Length = 601 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 63/201 (31%), Gaps = 36/201 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVL---REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R +++D G +L E + D VL +H H DH G+ L + Sbjct: 88 RMGPHRILLDCGLGDGSSLLTSLAESQMPADVVLVSHAHPDHARGLLDL----HHTFPLL 143 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 +YA+ K L P ++ + G V+E P Sbjct: 144 PIYASEVTSKLL--------PLNWLDQDPQKISQLCHALPLRSPVEIQEGLVVELFPAGH 195 Query: 167 QHGRISSL-----GFRFGNVAYCTD--------VNAFPAESLEKLQNLDFLIIDALK--- 210 G ++ L R + Y D V E L L+ L+ LII+ Sbjct: 196 LPGAVAILLTYTTAERSYKLLYTGDFFLSNSRLVEGLRLEELRGLE-LNVLIIEGTYGTS 254 Query: 211 NGLHSSHFSLSESLKKIELIN 231 H H + + E IN Sbjct: 255 RHPHRRH----QENQLAERIN 271 >gi|71083598|ref|YP_266317.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] gi|71062711|gb|AAZ21714.1| metallo-beta-lactamase family protein [Candidatus Pelagibacter ubique HTCC1062] Length = 551 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 47/148 (31%), Gaps = 30/148 (20%) Query: 48 SERGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDG 94 + G + ++VD G F L ++ + ++ TH H DHI I Sbjct: 26 GKPGEHKWIMVDIGVTFADDTLPGIDLIYPDPGFIVDKKDDLLGIILTHAHEDHIGAIAH 85 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L + ++A P + E F+ K +D + IV N D Sbjct: 86 LWP-----QLKCKIFATPFTAVLIKEKFKE--KNIDVTKFLKIVQLNGTVNLD------- 131 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVA 182 + I H + G R A Sbjct: 132 ---PFKIEYITLTHSILEPNGLRIETPA 156 >gi|322502715|emb|CBZ37798.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 756 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 51/190 (26%), Gaps = 37/190 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + V++D G L + ID VL TH H DH Sbjct: 39 RSCVVVRYKG-----RGVMLDCGNHPAKSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGA 93 Query: 92 IDGLRGYFLKQ---KRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 + YF Q K I + K + F D + + Sbjct: 94 L----PYFCNQTSFKGRI--FMTSATKAFYKMVMNDFLRIGAGASDLVTSEWLQSTIDRI 147 Query: 146 NDVPICMKSAGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 V + I P H + G R Y D + P L + Sbjct: 148 ETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVDIAGMR---ALYTGDFSRVPDRHLLGAE 204 Query: 200 ----NLDFLI 205 + D LI Sbjct: 205 VPPYSPDILI 214 >gi|291522768|emb|CBK81061.1| Zn-dependent hydrolases, including glyoxylases [Coprococcus catus GD/7] Length = 293 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 84/243 (34%), Gaps = 44/243 (18%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI------DAVLYTHPHADHIHGIDGL 95 + S G TV+ D G +Y + E++ I DAV TH H DH+ + + Sbjct: 11 ILGSCHLAVGKRNTVLFDPGMAWYGEKTVEKIKEIIGDRPIDAVFLTHSHYDHVGALPVI 70 Query: 96 RGYFLKQKRPIDVYA----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + Y+ YA + K L L+ P + I+ + + I Sbjct: 71 KKYWPDAMVFGAAYAGRVFSKLSAKRLIRELSASAAQLNGTALPDDYSTRAIQLDQMLIG 130 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA-FPAESLEKLQNLD-----FLI 205 G I + Q I ++G ++Y D + +E++ + D FL+ Sbjct: 131 ----GETINVGDVCVQ--SIKTVGHTKDCLSYLIDGHDLLASETIGSINTEDDYMPQFLV 184 Query: 206 IDALKNGLHSSHFSLSESLKKI---ELINPKNAILTHMHVDLDYDMVLKSTPSRVVPAFD 262 S E++K I K LTH + V ++TP D Sbjct: 185 -------------SCEEAMKSIDSCRNSGAKKLWLTH------HGEVGEATPELWQWFED 225 Query: 263 GMQ 265 G+ Sbjct: 226 GLT 228 >gi|240144183|ref|ZP_04742784.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|257203787|gb|EEV02072.1| metallo-beta-lactamase family protein [Roseburia intestinalis L1-82] gi|291536438|emb|CBL09550.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Roseburia intestinalis M50/1] gi|291538694|emb|CBL11805.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Roseburia intestinalis XB6B4] Length = 536 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 9/70 (12%) Query: 52 SNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + ++VD G PD Y Q + ID V TH H DH L Sbjct: 22 GDKHILVDCGMEQGPDLYTNQEIPVNAAMIDYVFVTHAHIDHSG----LLPLLYNHGFRG 77 Query: 107 DVYAAPDCMK 116 +Y + Sbjct: 78 KIYCTLATNE 87 >gi|194015121|ref|ZP_03053738.1| protein YkqC [Bacillus pumilus ATCC 7061] gi|194014147|gb|EDW23712.1| protein YkqC [Bacillus pumilus ATCC 7061] Length = 555 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 44/150 (29%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLK 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ + E D K+A Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLHIYEEEDTIKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|46907662|ref|YP_014051.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b F2365] gi|47092724|ref|ZP_00230510.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|226224035|ref|YP_002758142.1| hypothetical protein Lm4b_01444 [Listeria monocytogenes Clip81459] gi|254824506|ref|ZP_05229507.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|254932619|ref|ZP_05265978.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|300765576|ref|ZP_07075555.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|46880930|gb|AAT04228.1| metallo-beta-lactamase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47018912|gb|EAL09659.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 4b H7858] gi|225876497|emb|CAS05206.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293584178|gb|EFF96210.1| metallo-beta-lactamase [Listeria monocytogenes HPB2262] gi|293593745|gb|EFG01506.1| metallo-beta-lactamase [Listeria monocytogenes FSL J1-194] gi|300513677|gb|EFK40745.1| metallo-beta-lactamase [Listeria monocytogenes FSL N1-017] gi|328465480|gb|EGF36709.1| hypothetical protein LM1816_06035 [Listeria monocytogenes 1816] gi|328474953|gb|EGF45747.1| hypothetical protein LM220_03127 [Listeria monocytogenes 220] Length = 555 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + AV TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAVFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|291525271|emb|CBK90858.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale DSM 17629] Length = 535 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 9/70 (12%) Query: 52 SNTTVIVDTG----PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G D Y Q + ID V TH H DH L Sbjct: 22 GDTHILIDCGMEQGADLYVNQEIPVNPSLIDYVFVTHAHIDHSG----LLPLIYNHGFRG 77 Query: 107 DVYAAPDCMK 116 ++A Sbjct: 78 TIFATKATTD 87 >gi|325982482|ref|YP_004294884.1| beta-Casp domain [Nitrosomonas sp. AL212] gi|325532001|gb|ADZ26722.1| Beta-Casp domain [Nitrosomonas sp. AL212] Length = 465 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 33/124 (26%), Gaps = 40/124 (32%) Query: 5 YHFTILG-----CGAS----LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTT 55 T LG G+S G + D G +++ R+ Sbjct: 1 MQLTFLGAAGEVTGSSYLIETGTVKFLVDCGMFQGGREADKKNRT--------------- 45 Query: 56 VIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + ++D VL TH H DH + L + + VY Sbjct: 46 ------------AFKFDPKTVDFVLLTHAHIDHSGLLPRLSAWGFRG----PVYCTAATA 89 Query: 116 KHLF 119 L Sbjct: 90 DLLH 93 >gi|238023165|ref|ZP_04603591.1| hypothetical protein GCWU000324_03091 [Kingella oralis ATCC 51147] gi|237865548|gb|EEP66688.1| hypothetical protein GCWU000324_03091 [Kingella oralis ATCC 51147] Length = 141 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 6/77 (7%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQ--VLSIDAVLYTHPHADHIHGIDGLR 96 R+S + + V+VD G + R + + AVL + H DH++ L Sbjct: 51 RAS--VGYLVRENGRAAVLVDFGSGTSLNFERAGAKIEDLQAVLLSQFHVDHVNDFPALV 108 Query: 97 --GYFLKQKRPIDVYAA 111 F ++ R + VY Sbjct: 109 KGAVFTRRNRDLPVYGP 125 >gi|194014955|ref|ZP_03053572.1| metallo beta lactamase [Bacillus pumilus ATCC 7061] gi|194013981|gb|EDW23546.1| metallo beta lactamase [Bacillus pumilus ATCC 7061] Length = 555 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 8/114 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFK 127 L E+ + A+ TH H + I G+ K + VY + L E + Y F Sbjct: 60 LTERADRVKAIFLTHGHDEAIGGVFHCLS-----KLSVPVYGTKLTLALLREKLKQYGFN 114 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-IPILQQHGRISSLG-FRFG 179 D + I E V + I G I G F+F Sbjct: 115 QKADLREVHAKSVITFETTKVSFFRTNHSIPDSVGISFKTSLGSIVCTGDFKFD 168 >gi|187777625|ref|ZP_02994098.1| hypothetical protein CLOSPO_01217 [Clostridium sporogenes ATCC 15579] gi|187774553|gb|EDU38355.1| hypothetical protein CLOSPO_01217 [Clostridium sporogenes ATCC 15579] Length = 290 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 ++DTG ++Y + V ID V+ TH H DH G+ Sbjct: 48 GKENYLIDTGWEYYSGKILSYLNSNNVDKIDGVILTHYHDDHYGGL 93 >gi|168181468|ref|ZP_02616132.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237793859|ref|YP_002861411.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182675315|gb|EDT87276.1| metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229262355|gb|ACQ53388.1| metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 290 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGI 92 ++DTG ++Y + V ID V+ TH H DH G+ Sbjct: 48 GKENYLIDTGWEYYSGKILSYLNSNNVDKIDGVILTHYHDDHYGGL 93 >gi|157692362|ref|YP_001486824.1| metallo beta lactamase [Bacillus pumilus SAFR-032] gi|157681120|gb|ABV62264.1| metallo beta lactamase [Bacillus pumilus SAFR-032] Length = 555 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 8/114 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFK 127 L E+ + A+ TH H + I G+ K + VY + L E + Y F Sbjct: 60 LTERADRVKAIFLTHGHDEAIGGVFHCLS-----KLSVPVYGTKLTLALLREKLKQYGFN 114 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-IPILQQHGRISSLG-FRFG 179 D + I E V + I G I G F+F Sbjct: 115 QKADLREVHAKSVITFETTKVSFFRTNHSIPDSVGISFKTSLGSIVCTGDFKFD 168 >gi|325527248|gb|EGD04627.1| hydroxyacylglutathione hydrolase [Burkholderia sp. TJI49] Length = 268 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + VD G +VL E+ + A+L TH HADH+ G++ LR P+ V Sbjct: 21 SDGRDAIAVDPGEAAPVRRVLAERGWRLTAILLTHHHADHVGGVEALRAGQ-PDDLPLPV 79 Query: 109 YAAP 112 Y Sbjct: 80 YGPA 83 >gi|303231279|ref|ZP_07318016.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514054|gb|EFL56059.1| metallo-beta-lactamase domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 391 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 27/145 (18%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 +L D ++ +H H DH+ + I +Y M L + D Sbjct: 53 GILDCDGIVISHYHMDHLGQLTSALP-------EIPLY-----MGELSKEVAMIATQHQD 100 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD- 186 + + +++ N G I P++ H + S F V Y D Sbjct: 101 KD----LYLRLLDANTFRGGEAFTIGNIHIRPLVIDHSAVDSYMFVIEAEGKRVLYTGDF 156 Query: 187 -VNAFPAESLEKL-----QNLDFLI 205 ++ LEKL N+D LI Sbjct: 157 RMHGVRGHVLEKLIRTYIGNVDVLI 181 >gi|111023706|ref|YP_706678.1| hypothetical protein RHA1_ro06748 [Rhodococcus jostii RHA1] gi|110823236|gb|ABG98520.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length = 664 Score = 44.7 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 PDF + +++ ++AV+ TH H DHI I + L+ + + V + + Sbjct: 161 PDFRH--IEDRMADVEAVVLTHGHEDHIGAI----PFLLRLRPDLPVVGSRFTLA 209 >gi|297527491|ref|YP_003669515.1| KH-domain/beta-lactamase-domain protein [Staphylothermus hellenicus DSM 12710] gi|297256407|gb|ADI32616.1| KH-domain/beta-lactamase-domain protein [Staphylothermus hellenicus DSM 12710] Length = 647 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 29/156 (18%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-ALD 130 + +DAV+ TH H DHI L K +Y + + + + Sbjct: 234 NLSELDAVIVTHAHLDHIG----LVPLLYKYGYRGPLYVTKPTRELMVIMIKDLIEVTQR 289 Query: 131 DRTYPP---------IVNPIVIENNDVP------ICMKSAGGVIEAIPILQQHGRISSLG 175 + Y P I++ I +E DV G I I+ H +G Sbjct: 290 EGKYLPYSEKDLMTAILHTIPLEYGDVTDVAPDIKVTMYNAGHILGSAIVHLH-----IG 344 Query: 176 FRFGNVAYCTDVNAFP----AESLEKLQNLDFLIID 207 N+ Y D P + +K ++ LI++ Sbjct: 345 MGLHNIVYTGDFKYAPTRLLNRAEDKFPRVETLIME 380 >gi|239625496|ref|ZP_04668527.1| metallo beta-lactamase family protein [Clostridiales bacterium 1_7_47_FAA] gi|239519726|gb|EEQ59592.1| metallo beta-lactamase family protein [Clostridiales bacterium 1_7_47FAA] Length = 360 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 50 RGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++D G + + + V ++D V+ THPH+DHI G+D + F K Sbjct: 63 ESDGHYMLIDAGENDQADTVVSYLKQAGVTTLDYVIGTHPHSDHIGGLDKVIEEFTVGKV 122 Query: 105 PID 107 + Sbjct: 123 ILP 125 >gi|187735651|ref|YP_001877763.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425703|gb|ACD04982.1| beta-lactamase domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 279 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTG-PDFYMQVLR----EQV--LSIDAVLYTHPHADHI 89 R SS+ + + +RG ++VD G +LR V S+D +L TH H DHI Sbjct: 64 RVPSSVNV-FLLKRGDGKIILVDAGNGGKRGGMLRKLEQSGVFPESVDFILLTHMHGDHI 122 Query: 90 HGI 92 G+ Sbjct: 123 GGL 125 >gi|116749032|ref|YP_845719.1| beta-lactamase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698096|gb|ABK17284.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 561 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +T V++D G F + L++ + A+L TH H DHI I Sbjct: 34 EDTIVVIDAGLMFPEEDMLGIDIVIPDFTYLQKNRNRVRALLVTHGHEDHIGAIP----- 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 FL ++ P+ +YA + + E Sbjct: 89 FLLREVPVPIYATTLTLALIKEK 111 >gi|320104457|ref|YP_004180048.1| RNA-metabolising metallo-beta-lactamase [Isosphaera pallida ATCC 43644] gi|319751739|gb|ADV63499.1| RNA-metabolising metallo-beta-lactamase [Isosphaera pallida ATCC 43644] Length = 470 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 23/118 (19%) Query: 52 SNTTVIVDTGP--------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +++D G D + + S+DAV+ +H H DHI + L ++ Sbjct: 22 GDHRILLDCGLYDSNRFDLDSPNRRMPFNPRSLDAVIVSHAHNDHIGRLPCL----IRDG 77 Query: 104 RPIDVYAAPDCMKHL-----------FESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 VY P + + E R+ FK + P + + Sbjct: 78 YTGPVYCTPATAEIMGIMLRDSARIQREDLRHAFKRRPNPKDDPNREIRLADTPLFDF 135 >gi|238924601|ref|YP_002938117.1| putative exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale ATCC 33656] gi|238876276|gb|ACR75983.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale ATCC 33656] Length = 535 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 9/70 (12%) Query: 52 SNTTVIVDTG----PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G D Y Q + ID V TH H DH L Sbjct: 22 GDTHILIDCGMEQGADLYVNQEIPVNPSLIDYVFVTHAHIDHSG----LLPLIYNHGFRG 77 Query: 107 DVYAAPDCMK 116 ++A Sbjct: 78 TIFATKATTD 87 >gi|254500395|ref|ZP_05112546.1| RNA-metabolising metallo-beta-lactamase family [Labrenzia alexandrii DFL-11] gi|222436466|gb|EEE43145.1| RNA-metabolising metallo-beta-lactamase family [Labrenzia alexandrii DFL-11] Length = 559 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 47 VSERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGID 93 G+ +IVD G F ++ L ++V +I ++ TH H DH I Sbjct: 31 FGPEGNRKWLIVDCGVSFAGPELPGIDLVMPDIKFLEDEVNNIAGMVITHAHEDHYGAIL 90 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHL 118 L + + VYA L Sbjct: 91 HLWPFL-----KVPVYATAFTAGLL 110 >gi|218132861|ref|ZP_03461665.1| hypothetical protein BACPEC_00722 [Bacteroides pectinophilus ATCC 43243] gi|217991734|gb|EEC57738.1| hypothetical protein BACPEC_00722 [Bacteroides pectinophilus ATCC 43243] Length = 556 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 18/82 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 ++ ++VD G F L+E + + + TH H DHI + Sbjct: 28 ESEDSIIVVDCGLAFPDDDMLGIDLVIPDVSYLKENISKVKGFVITHGHEDHIGAL---- 83 Query: 97 GYFLKQKRPIDVYAAPDCMKHL 118 Y LK + VYA + Sbjct: 84 PYVLKDVN-VPVYATKLTTAII 104 >gi|315231930|ref|YP_004072366.1| polyadenylation specificity factor-like protein [Thermococcus barophilus MP] gi|315184958|gb|ADT85143.1| polyadenylation specificity factor-like protein [Thermococcus barophilus MP] Length = 648 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 66/202 (32%), Gaps = 44/202 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + + V+VD G P+F VL E + +DA++ Sbjct: 199 RSALLVQT-----NESFVLVDFGINVAALNDPKKAFPHFDAPEFRY-VLNEGL--LDAII 250 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH + L Y L +Y P + + + P+ P Sbjct: 251 ITHAHLDHSGLLPYLFRYNLFDG---PIYTTPPTRDLMVLLQKDFIEIQQSNGAEPLYKP 307 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVNA 189 I+ G V + P ++ H LG NVA D Sbjct: 308 KDIKEVVKHTITLDYGEVRDISPDMRLTLHNAGHILGSAIVHLHIGNGLHNVAVTGDFKF 367 Query: 190 FP----AESLEKLQNLDFLIID 207 P + + L+ LI++ Sbjct: 368 IPTRLFEPANARFPRLETLIME 389 >gi|114799524|ref|YP_760010.1| ribonuclease Z [Hyphomonas neptunium ATCC 15444] gi|114739698|gb|ABI77823.1| metallo-beta-lactamase family protein [Hyphomonas neptunium ATCC 15444] Length = 362 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 58/208 (27%), Gaps = 26/208 (12%) Query: 27 ACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL--SIDAVLYTHP 84 C +P R+ + + I D G ++ R + + +H Sbjct: 58 VCGSGSPLPDAARAG---PCIGVLAGDRAFIFDVGAGSIRRLTRMGFPTGRTEKLYLSHL 114 Query: 85 HADHIHGIDGLRGYFLKQK---RPIDVYAAPDCMK---------HLFESFRYCFKAL--- 129 H+DH GI L P+ V + + ++R Sbjct: 115 HSDHFDGIGELMIGAWVGGSRSAPLPVAGPEGVAEVMNGFNAAYRIDSTYRMAHHGPGVA 174 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI-SSLGFRF---GNVAYCT 185 + Y I + + G + L H I + GFR G A + Sbjct: 175 NPDGYGLAPEVIDLPAGPGSRAVLLDEGDLLITAFLVNHSPIEPAYGFRIDYKGRSAVIS 234 Query: 186 -DVNAFPAESLEKLQNLDFLIIDALKNG 212 D + + + D L +AL Sbjct: 235 GDTV-YSENLVAVSEGADILFHEALHPE 261 >gi|116511339|ref|YP_808555.1| Zn-dependent hydrolase, including glyoxylase [Lactococcus lactis subsp. cremoris SK11] gi|116106993|gb|ABJ72133.1| Zn-dependent hydrolase, including glyoxylase [Lactococcus lactis subsp. cremoris SK11] Length = 210 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Query: 54 TTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 + +I+D G D ++ L+ ++ A+L TH H DHI G++ L+ YF +Y Sbjct: 23 SYLIIDPGSDSAALLEYLKLTDKAVCAILLTHAHFDHIMGLNDLKKYFPSA----PIYL 77 >gi|300856380|ref|YP_003781364.1| putative metal-dependent RNase [Clostridium ljungdahlii DSM 13528] gi|300436495|gb|ADK16262.1| putative metal-dependent RNase [Clostridium ljungdahlii DSM 13528] Length = 825 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 51/185 (27%), Gaps = 63/185 (34%) Query: 53 NTTVIVDTG----------PDFYMQVLREQVLSIDAVLYTHPHADHIHG----------- 91 N +++D G PDF + +D ++ +H H DHI Sbjct: 23 NKNILLDCGIRQSSSKDTLPDFKS---IQDQGGVDVIIVSHAHMDHIGSLPIISKEYPGA 79 Query: 92 ---------------IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR--YCFKALDDRTY 134 + ++ I +YA D + L F Y Sbjct: 80 RIYTTRMTKDLMKVLLYDSLKIMKNREGEIPLYAEGDVISMLNRVFPINYM--------- 130 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES 194 V + EN + I I G + Y D + F ++ Sbjct: 131 ---VEFSIFENIKLTFYTAGHIAGAACIYITTPEGSLF----------YSGDFSIFSQKT 177 Query: 195 LEKLQ 199 +E L+ Sbjct: 178 VEGLK 182 >gi|169826931|ref|YP_001697089.1| hypothetical protein Bsph_1351 [Lysinibacillus sphaericus C3-41] gi|168991419|gb|ACA38959.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 556 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L V I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDDLLGIDYVIPDYTYLVRNVDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + VY + L L++ I I+ DV K++ Sbjct: 89 QVNVPVYGGKLALGLLRNK-------LEEHGLLRTTKLIEIKEEDVIKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H + G GN+ + D Sbjct: 137 FFRTTHSIPDAYGIVVKTPPGNIVHTGDFK 166 >gi|153854405|ref|ZP_01995683.1| hypothetical protein DORLON_01678 [Dorea longicatena DSM 13814] gi|149752931|gb|EDM62862.1| hypothetical protein DORLON_01678 [Dorea longicatena DSM 13814] Length = 547 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++ ++VD G F + L++ + + + TH H DHI + Sbjct: 22 EDSIIVVDCGLSFPEEDMLGIDLVIPDVTYLKDNIQKVKGFVITHGHEDHIGALP----- 76 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 ++ ++ + +YA M + + Sbjct: 77 YILRELNLPIYATKLTMGIIEKK 99 >gi|42518917|ref|NP_964847.1| hypothetical protein LJ0991 [Lactobacillus johnsonii NCC 533] gi|41583203|gb|AAS08813.1| hypothetical protein LJ_0991 [Lactobacillus johnsonii NCC 533] Length = 559 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 33 IIMDCGIKFPEDDMMGINYVISDYSYLVKNRKKIKALVVTHGHEDHIGGI----PYLLKK 88 Query: 103 KRPIDVYAAPDCMKHLF 119 I VYA P + + Sbjct: 89 IPEIPVYATPFALALIR 105 >gi|158313052|ref|YP_001505560.1| beta-lactamase domain-containing protein [Frankia sp. EAN1pec] gi|158108457|gb|ABW10654.1| beta-lactamase domain protein [Frankia sp. EAN1pec] Length = 561 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+AV+ TH H DHI + Y L+++R I + + + Sbjct: 65 PDF--TAIRDRLQDIEAVILTHAHEDHIGAV----PYLLRERRDIPLVGTRLTLALMVA- 117 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 K + R P + E + + G + + H Sbjct: 118 -----KLAEHRIQPVTLQIREEERH--------SFGPFDLEFLAVNHS 152 >gi|307266449|ref|ZP_07547985.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306918557|gb|EFN48795.1| DNA internalization-related competence protein ComEC/Rec2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 757 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 58 VDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID-VYAAPDCM 115 D G D + L V+ +D V +H DHI GI + Q+ +D V+ Sbjct: 536 FDVGEDLVLPFLYYKGVMKLDGVFISHTDIDHIGGI-----ITVLQQIKVDKVF--IGVQ 588 Query: 116 KHLFESFRYCFKALDDRTYPPIV----NPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 K E+F+ K ++ P I + + I+N ++ + +IE PI + Sbjct: 589 KVTDENFKKMIKVAKEKNIPVIFLKKGDKVEIDNIEIYVLHPDPQNLIEENPINNN-ALV 647 Query: 172 SSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELIN 231 + ++ + D + E L+NLD D LK H S + S + + IE N Sbjct: 648 FKMKYKKMEFLFTGD---IEKPAEEVLKNLDI-KTDILKVAHHGS--NTSSTQEFIEKAN 701 Query: 232 PK 233 PK Sbjct: 702 PK 703 >gi|291529271|emb|CBK94857.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Eubacterium rectale M104/1] Length = 535 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 9/70 (12%) Query: 52 SNTTVIVDTG----PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T +++D G D Y Q + ID V TH H DH L Sbjct: 22 GDTHILIDCGMEQGADLYVNQEIPVNPSLIDYVFVTHAHIDHSG----LLPLIYNHGFRG 77 Query: 107 DVYAAPDCMK 116 ++A Sbjct: 78 TIFATKATTD 87 >gi|254173118|ref|ZP_04879792.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] gi|214033274|gb|EEB74102.1| hydrolase, metallo-beta-lactamase superfamily [Thermococcus sp. AM4] Length = 211 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 77/220 (35%), Gaps = 48/220 (21%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVY 109 +++D PD + + +D +L TH H DH + LRG + +P+ Sbjct: 17 GVKILIDPYPDVDDDL----IGDVDYILITHEHTDHYGKVELLSRLRGATVIGPKPV--- 69 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 Y D T V E ++ G + A + Sbjct: 70 --------------YLMAIADGVT-------RVREISEGETVELGEGVKVTAFFMEHPSS 108 Query: 170 RISSLGFRFG---NVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESLK 225 + LG+ + + D AFPA L++L+ +D L L S + E+ + Sbjct: 109 QYP-LGYLIEGDKRLFHTGDTYAFPA--LQRLRGKVDVL----LVPISGRSTANEREAAQ 161 Query: 226 KIELINPKNAILTHMHVD----LDYDMVLKSTPSRVVPAF 261 IE + P+ I+ MH D + ++ + AF Sbjct: 162 IIEDVRPR--IVIPMHYGTYGNGDPEKLINELRKNRIFAF 199 >gi|145642096|ref|ZP_01797666.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae R3021] gi|145273175|gb|EDK13051.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae 22.4-21] Length = 115 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|308801395|ref|XP_003078011.1| Glyoxylase (ISS) [Ostreococcus tauri] gi|116056462|emb|CAL52751.1| Glyoxylase (ISS) [Ostreococcus tauri] Length = 349 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 10/65 (15%) Query: 52 SNTTVIVDTGPDFY-------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T V+VD G Y + R + A++ TH H DH+ G+ LR Sbjct: 68 GRTRVLVDCGEGRYGYAESVLETMRRVGCDRLSAIVCTHWHPDHVGGLRKLR---KALGA 124 Query: 105 PIDVY 109 + Y Sbjct: 125 HVPAY 129 >gi|16079535|ref|NP_390359.1| metal-binding hydrolase [Bacillus subtilis subsp. subtilis str. 168] gi|221310403|ref|ZP_03592250.1| hypothetical protein Bsubs1_13581 [Bacillus subtilis subsp. subtilis str. 168] gi|221314726|ref|ZP_03596531.1| hypothetical protein BsubsN3_13497 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319649|ref|ZP_03600943.1| hypothetical protein BsubsJ_13418 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323926|ref|ZP_03605220.1| hypothetical protein BsubsS_13552 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731031|sp|P54501|YQGX_BACSU RecName: Full=Uncharacterized protein yqgX gi|1303871|dbj|BAA12527.1| YqgX [Bacillus subtilis] gi|2634913|emb|CAB14410.1| putative metal-binding hydrolase [Bacillus subtilis subsp. subtilis str. 168] Length = 211 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +I D G + + Q ++E+ L+ A+L TH H DHI +D +R +K I VY Sbjct: 21 DDQCLIFDPGGEGHKINQYIKEKGLTPLAILLTHAHFDHIGALDEVR-----EKWDIPVY 75 Query: 110 AAPD 113 + Sbjct: 76 LHQN 79 >gi|328853802|gb|EGG02938.1| hypothetical protein MELLADRAFT_90551 [Melampsora larici-populina 98AG31] Length = 756 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 80/261 (30%), Gaps = 53/261 (20%) Query: 8 TILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTV----IVDTGPD 63 T LG G NP R S + SE + + ++D+G Sbjct: 505 TTLGTG----------------SANPSKYRNVSGTLLHIPSEADESHSGFHYALLDSGEG 548 Query: 64 FYMQVLR-------EQVLSIDAVLYTHPHADHIHG----------IDGLRGYFLKQKRPI 106 Q+ R E + + + +H HADH G + G+ L + + Sbjct: 549 TLGQIKRNFGSRWEEVLRDLKLIFISHLHADHHSGLATLLTARHKLSGVSPLVLVSQYGV 608 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 ++Y K L E + +V + + +E + Sbjct: 609 NLYLRE---KSLVEPMGIEQGLVHWIDVEKLVGARASNQDQKAKYEEFLPKGMEIETVRV 665 Query: 167 QH-GRISSLGF--RFG--NVAYCTDVNAFPAESLEKLQNLDFLI------IDALKNGLHS 215 H G+ L R + + D P +E + D LI +D Sbjct: 666 IHWGKCFGLCLSNRIQGWKIVFSGDTKRCPEL-IEAGVDADLLIHEASLGVDQKDLADFK 724 Query: 216 SHFSLSESLKK-IELINPKNA 235 H ++ ++++ +E + P Sbjct: 725 GHCTIDQAIEVGLESVKPSKV 745 >gi|313674316|ref|YP_004052312.1| metallo-hydrolase/oxidoreductase [Marivirga tractuosa DSM 4126] gi|312941014|gb|ADR20204.1| putative metallo-hydrolase/oxidoreductase [Marivirga tractuosa DSM 4126] Length = 247 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 40/178 (22%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + + D +L T H DH + ++ L S + Sbjct: 60 QNLNDADLILITDIHGDH---------------------LNQETLQALNTSNSHFIVPEA 98 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ-------QHGRISSLGFRF---GN 180 + IE + G I A+P+ +H + G+ Sbjct: 99 VAKKMEEIENSAIEILNNNKSTSFKGIEISALPMYNLPESEDSRHTKGRGNGYLLKIADK 158 Query: 181 VAYCT-DVNAFPAESLEKLQNLDF-LIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 + Y + D P + LQN+D I L S+ ++ + P Sbjct: 159 LIYISGDTEDIPE--MRALQNVDVAFICMNLPYT-----MSIEQASDAVLEFKPTIVY 209 >gi|312281372|ref|YP_004022735.1| hypothetical protein Calkr_2647 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181901|gb|ADQ42070.1| hypothetical protein Calkr_2647 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 365 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 13/79 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ + +++D+GP+ + + + +D V+ +HPH DHI +D + Sbjct: 58 SIIVQTPQ----GKNILIDSGPNTAESTVLSYLKSKGITKLDMVVVSHPHEDHIGNMDVI 113 Query: 96 RGYFLKQKRPIDVYAAPDC 114 + VYA Sbjct: 114 IQ-NFAVGK---VYAPNVT 128 >gi|289207593|ref|YP_003459659.1| hypothetical protein TK90_0408 [Thioalkalivibrio sp. K90mix] gi|288943224|gb|ADC70923.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 254 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 33/166 (19%) Query: 52 SNTTVIVDTGPDFYM---QVLREQ--VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T ++VD G ++ R+ +DAV TH H DH+ L ++ + Sbjct: 21 GSTRLLVDCGFSVQEIERRLARQGRAASDLDAVFVTHEHGDHLGSAPALS-----RRYDL 75 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA+ +S F L++ D+P+ + A IP Sbjct: 76 RVYASAGTRLAARDS---AFAHLEEIQ------------PDIPVELDDAL----IIPYTV 116 Query: 167 QHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA 208 H F F + + TD ++ L+++ Sbjct: 117 PHDAREPTQFAFSDGASRLVLMTDAGHISPHMIDTASGAQGLLLEC 162 >gi|218782631|ref|YP_002433949.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764015|gb|ACL06481.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans AK-01] Length = 433 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 34/173 (19%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 Q +DA+ +H H DH ++ I VY +P + F A Sbjct: 67 NQEPGVDAIFISHAHPDHYGLLN-------YVHPSIPVYMSPGTNALI--DIGNVFYAQK 117 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVAYCTD 186 I N V + + + G P L H + GF + Y D Sbjct: 118 TN----IQNRRVFQQWE-----PISLGPFVITPHLMDHSGPDASGFLIEVEDKRIFYSGD 168 Query: 187 VNA-------FPAESLEKLQNLDFLI-----IDALKNGLHSSHFSLSESLKKI 227 + L LD L+ + + + + + +++++I Sbjct: 169 FRGHGRKGKLLGLMEKQGLSELDCLLMEGTTLGGMHDAGFPTEADVEKAMQEI 221 >gi|126465835|ref|YP_001040944.1| beta-lactamase domain-containing protein [Staphylothermus marinus F1] gi|126014658|gb|ABN70036.1| beta-lactamase domain protein [Staphylothermus marinus F1] Length = 652 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 29/156 (18%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK-ALD 130 + +DAV+ TH H DHI L K +Y + + + + Sbjct: 239 NLSELDAVIVTHAHLDHIG----LVPLLYKYGYRGPLYVTKPTRELMVIMIKDLIEVTQR 294 Query: 131 DRTYPP---------IVNPIVIENNDVP------ICMKSAGGVIEAIPILQQHGRISSLG 175 + Y P I++ I +E DV G I I+ H +G Sbjct: 295 EGKYLPYSEKDLMTTILHTIPLEYGDVTDVAPDIKVTMYNAGHILGSAIVHLH-----IG 349 Query: 176 FRFGNVAYCTDVNAFP----AESLEKLQNLDFLIID 207 N+ Y D P + +K ++ LI++ Sbjct: 350 MGLHNIVYTGDFKYAPTRLLNRAEDKFPRVETLIME 385 >gi|118087061|ref|XP_418292.2| PREDICTED: similar to CGI-83 protein [Gallus gallus] Length = 288 Score = 44.7 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Query: 54 TTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +SI +L TH H DH GI + Sbjct: 41 RRILIDTGEPAIPEYIGCLKQALSEFNISIQEILVTHWHRDHTGGIPDI 89 >gi|322804816|emb|CBZ02369.1| late competence protein ComEC, DNA transport [Clostridium botulinum H04402 065] Length = 290 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 21/194 (10%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 ++DTG ++Y + V ID V+ TH H DH G+ + K ++ Sbjct: 48 GKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGL-EMLLKTSKVRK-- 104 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 V+ + Y I + I+ + + A I + Sbjct: 105 -VFLPKHDSDDKKKVIN--VVKKHKVKYAWIEDGWEIKGRKLNLK---AIVPINVDSKNE 158 Query: 167 QHGRISSLGFRFGNVAY--CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 + I G + + Y D E ++ + N D LK H F S S Sbjct: 159 NNNSIVLFG-KIDGIKYLFLGDCEK--REEMDMISNKKIKECDVLKVSHHG--FKTSNSD 213 Query: 225 KKIELINPKNAILT 238 + +++ PK AI+T Sbjct: 214 ELLDIAKPKIAIVT 227 >gi|302036914|ref|YP_003797236.1| putative cAMP phosphodiesterase, class-II [Candidatus Nitrospira defluvii] gi|300604978|emb|CBK41311.1| putative cAMP phosphodiesterase, class-II [Candidatus Nitrospira defluvii] Length = 262 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 63/193 (32%), Gaps = 43/193 (22%) Query: 9 ILGCGASLG-VPRITG--DWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 +LGC S VP G G C + N +++D G Sbjct: 5 VLGCHGSGQLVPGTNGPIQCGTC------------GFLV--------NDRLLMDAG-TIG 43 Query: 66 MQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAAPDCMKHLFE---- 120 ++ E+ I VL TH H DHI + L + P+ + A P+ + L Sbjct: 44 SRLFLEEQRRIRVVLLTHLHFDHIRELPTLADNLVGEIDEPVVIAAIPEVLDGLRAHIFN 103 Query: 121 --SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + F+ D + P+ P + + + PI H + ++GF Sbjct: 104 GTVYPDFFRLPD--SARPVFVPYELREGREDLL-----CGMGVTPIRVNH-VVPTVGFLL 155 Query: 179 GNVA----YCTDV 187 A Y D Sbjct: 156 REGAHTVLYSGDT 168 >gi|269965948|ref|ZP_06180041.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|269829501|gb|EEZ83742.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 438 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 11/71 (15%) Query: 53 NTTVIVDTG----PDFYMQV---LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 N +V++D G D Q + + + AV+ TH H DH+ + + L Sbjct: 23 NGSVLIDCGLLQGQDNVQQESLHIDFSISDLKAVVLTHSHIDHVGRL----PWLLAAGYK 78 Query: 106 IDVYAAPDCMK 116 +Y + Sbjct: 79 GPIYCTEATAE 89 >gi|268319685|ref|YP_003293341.1| metallo-beta-lactamase superfamily protein [Lactobacillus johnsonii FI9785] gi|262398060|emb|CAX67074.1| metallo-beta-lactamase superfamily protein [Lactobacillus johnsonii FI9785] Length = 559 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 33 IIMDCGIKFPEDDMMGINYVISDYSYLVKNRKKIKALVVTHGHEDHIGGI----PYLLKK 88 Query: 103 KRPIDVYAAPDCMKHLF 119 I VYA P + + Sbjct: 89 IPEIPVYATPFALALIR 105 >gi|258543469|ref|YP_003188902.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256634547|dbj|BAI00523.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01] gi|256637605|dbj|BAI03574.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-03] gi|256640657|dbj|BAI06619.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-07] gi|256643714|dbj|BAI09669.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-22] gi|256646769|dbj|BAI12717.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-26] gi|256649822|dbj|BAI15763.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-32] gi|256652810|dbj|BAI18744.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655866|dbj|BAI21793.1| metallo-beta-lactamase [Acetobacter pasteurianus IFO 3283-12] Length = 223 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGI 92 R S+ + VIVD G D + L++ +L ++A+L TH H DH G+ Sbjct: 19 RQNCSVL----WHEKTRKAVIVDAGGDVDVLLDFLKKNILEVEAILLTHGHLDHAGGV 72 >gi|208429880|ref|YP_002265433.1| endopeptidase-endolysin [Clostridium phage 39-O] gi|190683363|gb|ACE82007.1| endopeptidase-endolysin [Clostridium phage 39-O] Length = 940 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 49 ERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGI 92 + + ++D G ++ +R + ID V TH H+DHI GI Sbjct: 636 QNHNGEIYLIDGGEKKSAKLVEDYLIRNNINKIDKVFITHYHSDHIEGI 684 >gi|206970668|ref|ZP_03231620.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] gi|206734304|gb|EDZ51474.1| metallo-beta-lactamase family protein [Bacillus cereus AH1134] Length = 419 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 9/74 (12%) Query: 50 RGSNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + T ++ D G + Y ++ E V +DAV +H H DH G+ L Y K+K Sbjct: 20 KNKETKIVFDCGINRSYENSYPKIEGEVVQFLDAVFLSHIHEDHTMGLPLLAKYGYKKK- 78 Query: 105 PIDVYAAPDCMKHL 118 ++ + L Sbjct: 79 ---IWTTRYTKEQL 89 >gi|168035028|ref|XP_001770013.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678734|gb|EDQ65189.1| predicted protein [Physcomitrella patens subsp. patens] Length = 530 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 77/237 (32%), Gaps = 31/237 (13%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 RR S+++ SR T + G F + + + TH H DH G+ Sbjct: 174 RRAISAVRNSRAIGTSGIPTWMCIPGTSFRVDAFKHTTGNCSNWFLTHFHTDHYQGL--T 231 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 RG+ R ++ + + + LD P+ ++I+ V + Sbjct: 232 RGF-----RHGKIFCSSITARLISLRIG---VPLDRIQALPLNETVLIDGVRVTFIDANH 283 Query: 156 GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDF--LIIDALKNGL 213 I +G + G+ Y +D+ S + L+ LI+D Sbjct: 284 CPGSVMILFEPPNGEVVLH---TGDFRYYSDM-----ASNDVLRKCRITTLILDTTYCDP 335 Query: 214 ---HSSHFSLSE----SLKKIELINPKNAILTH---MHVDLDYDMVLKSTPSRVVPA 260 S+ + +++ E NPK L + + + V K+ V Sbjct: 336 QHDFPKQDSVIQFVIDAIQ-AEAFNPKTLFLIGTYTIGKEKLFLEVGKALQKYVYVG 391 >gi|134292067|ref|YP_001115803.1| beta-lactamase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135224|gb|ABO56338.1| beta-lactamase domain protein [Burkholderia vietnamiensis G4] Length = 287 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Query: 44 ISRVSERGSNTTVIVDTGPD-FY-------MQVLREQV--LSIDAVLYTHPHADHIHGID 93 I+ RG TV+VD G F + + + ID +L TH H DHI G+ Sbjct: 60 INCYVIRGGGRTVLVDAGAGGFRNWGGLLPAALSQAGIDARDIDTILLTHAHPDHIGGLL 119 Query: 94 GLR 96 R Sbjct: 120 DAR 122 >gi|121535281|ref|ZP_01667095.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] gi|121306166|gb|EAX47094.1| beta-lactamase domain protein [Thermosinus carboxydivorans Nor1] Length = 554 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D+G F L E + A++ TH H DHI + Sbjct: 27 RYGDDILVIDSGLAFPEDDMLGIDLVIPDITYLLENKDFVRAIVLTHGHEDHIGAL---- 82 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y LKQ + VY P + L Sbjct: 83 PYVLKQLN-VPVYGTPLTLGILEGR 106 >gi|262195938|ref|YP_003267147.1| ribonuclease Z family protein [Haliangium ochraceum DSM 14365] gi|262079285|gb|ACY15254.1| ribonuclease Z family protein [Haliangium ochraceum DSM 14365] Length = 290 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 70/239 (29%), Gaps = 50/239 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY- 98 +S+ +S + + D G D + +H H DH+ G+ G Sbjct: 29 TSMMVSELGA-------MFDVGMALRS------FSGADRLFLSHAHMDHLGGLLAFLGMR 75 Query: 99 -FLKQKRPIDVYAAPDCMKHLF---------ESFR-----------YCFKALDDRTYPPI 137 +RP++V+ + + + F + D + + Sbjct: 76 GAYGVERPLEVFLPAAIAEPVQALLRAAEPLQRFPLKIATVPMEPGQVVELRRDLSVRAL 135 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQH-GRISSLG---FRFG---NVAYCTDVNAF 190 + + + + E + GR G FR +AY TD Sbjct: 136 RTFHPVPSLGYQFFRRVSKLRDEFRDLPGAEIGRRRRAGEDLFREETHLELAYVTDTLVR 195 Query: 191 PAESLEKLQNLDFLIIDALKNGLHSS--------HFSLSESLKKIELINPKNAILTHMH 241 ++ L LI++ S H L E L++ + + +L H Sbjct: 196 VLDTEPSLLRSKVLILECTFLDQRKSLADSRAGCHIHLDELLERADSFENEALVLMHFS 254 >gi|254819169|ref|ZP_05224170.1| metal-dependent hydrolase of the beta-lactamase superfamily protein III [Mycobacterium intracellulare ATCC 13950] Length = 227 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 61/201 (30%), Gaps = 30/201 (14%) Query: 57 IVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID------VYA 110 ++D G + R VL +H HADH + GL + ++ P +Y Sbjct: 2 VIDFGGGVLGALQRYADPGSVHVLLSHLHADHCLDLPGL--FVWRRYHPTRPLGKALLYG 59 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPI--VIENNDVPICMKSAGGVIEAIPILQQH 168 D L Y ++ + + G + P + H Sbjct: 60 PGDTWSRL---------GAASSPYGGEIDDCSDIFDVRHWVDGEPVTIGELTVTPRVVAH 110 Query: 169 GRISSLGFRFGN-----VAYCTDVNAFPAESLEKLQNLDFLIIDALKN----GLHSSHFS 219 S G R + Y D + +E + D + +A + H S Sbjct: 111 PT-ESYGLRITDSSGASFVYSGDT-GVCDQLVELARGADVFLCEASWTHSADRPPALHLS 168 Query: 220 LSESLKKIELINPKNAILTHM 240 +E+ + +LTH+ Sbjct: 169 GTEAGRAAAEAGVHELLLTHI 189 >gi|242208511|ref|XP_002470106.1| predicted protein [Postia placenta Mad-698-R] gi|220730858|gb|EED84709.1| predicted protein [Postia placenta Mad-698-R] Length = 386 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 57/215 (26%), Gaps = 63/215 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 + TILG ++ P++ +N S + R + D G Sbjct: 7 SSVNITILGSASAQ-------------PSSTRNH--------SAFALRLGGDVWLFDCGE 45 Query: 63 --DFYMQVLREQVLSIDAVLYTHPHADHIHGI-----------------DGLR--GYFLK 101 +Q ++ I + TH H DHI G+ D R Sbjct: 46 ATQHRVQKSTVKMGRIQKIFITHTHGDHIFGLLPLLASRLDGAGGVVDADDPRTKAESRH 105 Query: 102 QKRPIDVYAAPDCMKHLFESF---------RYCFKALDDRTYPPI----VNPIVIENNDV 148 P+++Y ++ Y L + PP+ + P E Sbjct: 106 AVPPLEIYGPLGTRAYIRSGLTYTHTLLGAPYVVHELRFISDPPLDPTALPPHSFELPGR 165 Query: 149 PICMKSAGGV-------IEAIPILQQHGRISSLGF 176 + + H + +G+ Sbjct: 166 DLQQVDGVWPEIYRDDLVTVSAAPIMHS-VPCVGY 199 >gi|170700306|ref|ZP_02891319.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] gi|170134793|gb|EDT03108.1| beta-lactamase domain protein [Burkholderia ambifaria IOP40-10] Length = 467 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + V+VD G + + Q L ++DAV+ TH H DH ++ Sbjct: 20 EHGSRRVLVDCGLFQGTKNLRLRNWQPLPLAPDTLDAVVLTHAHLDHSG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 + VY + Sbjct: 76 EGYRGPVYCTAATAE 90 >gi|154685236|ref|YP_001420397.1| YflN [Bacillus amyloliquefaciens FZB42] gi|154351087|gb|ABS73166.1| YflN [Bacillus amyloliquefaciens FZB42] Length = 264 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 12/86 (13%) Query: 56 VIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++VD G +++ E++ + AV+ TH H DH+ I+ L ++ + V Sbjct: 46 ILVDAGMPQSAEMITEEMKRRFKEGYQLKAVILTHGHFDHVGAIEELLEFW-----DVPV 100 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY 134 Y + ++ Y D + Sbjct: 101 YIHEKELPYVTGKADYPPARPDAKKG 126 >gi|145503268|ref|XP_001437611.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404762|emb|CAK70214.1| unnamed protein product [Paramecium tetraurelia] Length = 223 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 37/119 (31%), Gaps = 21/119 (17%) Query: 52 SNTTVIVDTGPD------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 +++DTG Q+L ++ I VL TH H DHI GI + Sbjct: 25 GKKRILIDTGEGKEQYKIHLKQILEQEQCEISIVLITHHHLDHILGIPQVLELCP----- 79 Query: 106 IDVYAAPDCMKHLFESFR----YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 K L + Y F L D V +I +P G I Sbjct: 80 -----DAKVYKGLDHNLENDKLYPFLPLQD-GQIFQVENCIITAISLPGHCVDHFGFIT 132 >gi|327330583|gb|EGE72329.1| putative Zn-dependent hydrolase [Propionibacterium acnes HL097PA1] Length = 215 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 49/209 (23%) Query: 40 SSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S + + +R ++VD G + + +DA+L TH H DH+ Sbjct: 9 SCILVEAAGQR-----ILVDPGNLSKSWR------GLTDLDAILVTHRHPDHV------- 50 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ + L ++ ++ I ++ + V Sbjct: 51 --------------DPEHIGALVDANSGAVVRAEEGACHEIP---ALDADPVAPGDVLQI 93 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALK 210 G + + H I GNV Y + P + L++ + +D L A Sbjct: 94 GEVRIEAVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA-- 151 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH 239 H+ ++ E++ + ++ L H Sbjct: 152 ---HAPWAAMKETVDFARSVGARHGFLIH 177 >gi|312905170|ref|ZP_07764291.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0635] gi|310631560|gb|EFQ14843.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0635] gi|315579114|gb|EFU91305.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0630] Length = 709 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 87/248 (35%), Gaps = 60/248 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF-------YMQ--------------VLREQVLSIDAV 79 SL I R ++DTG + + + V +D V Sbjct: 451 SLFIQAPFHR---KNTLIDTGGRLSFDKEAWRQRKNSRSGAEYSVIPFLESQGVKRLDEV 507 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPI 137 + TH H DH + + QK PI V P SFR K L PI Sbjct: 508 IITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQKSGTDCRPI 562 Query: 138 VNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 + P I N V + S GG ++I Q LG R + + D+ A Sbjct: 563 LAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLFTGDLEAEGE 613 Query: 193 ES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLD 245 E +L+ ID LK G H S S ++ + I+ +NP+ A+++ + Sbjct: 614 EQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISAGLNNRFKHP 665 Query: 246 YDMVLKST 253 + L + Sbjct: 666 HQETLATL 673 >gi|306821109|ref|ZP_07454725.1| metallo-beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550802|gb|EFM38777.1| metallo-beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 553 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 18/79 (22%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L + I A+L TH H DHI I +F Sbjct: 30 NDIVVIDCGLIFPEDEMLGIDIVIPDVSYLVKNKDRIKALLITHGHEDHIGAI----PFF 85 Query: 100 LKQKRPIDVYAAPDCMKHL 118 LK K + +Y P M + Sbjct: 86 LK-KMNVPIYTMPFTMGLI 103 >gi|292491187|ref|YP_003526626.1| ribonuclease Z [Nitrosococcus halophilus Nc4] gi|291579782|gb|ADE14239.1| ribonuclease Z [Nitrosococcus halophilus Nc4] Length = 335 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 3/95 (3%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++ D G D + ++L I + +H H DH D L L +++ + ++ Sbjct: 26 EKRALLFDLG-DIRA-LPARKILRISDIFVSHTHMDHFADFDWLLRLVLGREKRLRLFGP 83 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN 146 P + HL + Y ++ IV E + Sbjct: 84 PGFIDHLKHKLG-AYSWNLVHNYENNLDLIVTELH 117 >gi|257090636|ref|ZP_05584997.1| DNA internalization-related competence protein [Enterococcus faecalis CH188] gi|256999448|gb|EEU85968.1| DNA internalization-related competence protein [Enterococcus faecalis CH188] Length = 776 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 87/248 (35%), Gaps = 60/248 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF-------YMQ--------------VLREQVLSIDAV 79 SL I R ++DTG + + + V +D V Sbjct: 518 SLFIQAPFHR---KNTLIDTGGRLSFDKEAWRQRKNSRSGAEYSVIPFLESQGVKRLDEV 574 Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY--PPI 137 + TH H DH + + QK PI V P SFR K L PI Sbjct: 575 IITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQKSGTDCRPI 629 Query: 138 VNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPA 192 + P I N V + S GG ++I Q LG R + + D+ A Sbjct: 630 LAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLFTGDLEAEGE 680 Query: 193 ES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT---HMHVDLD 245 E +L+ ID LK G H S S ++ + I+ +NP+ A+++ + Sbjct: 681 EQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISAGLNNRFKHP 732 Query: 246 YDMVLKST 253 + L + Sbjct: 733 HQETLATL 740 >gi|225375610|ref|ZP_03752831.1| hypothetical protein ROSEINA2194_01235 [Roseburia inulinivorans DSM 16841] gi|225212589|gb|EEG94943.1| hypothetical protein ROSEINA2194_01235 [Roseburia inulinivorans DSM 16841] Length = 534 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 9/68 (13%) Query: 52 SNTTVIVDTG----PDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + V+VD G PD Y Q + ++D V TH H DH L Sbjct: 22 GDKHVLVDCGMEQGPDLYVNQEIPVNAAAVDYVFVTHAHIDHSG----LLPLLYNHGFRG 77 Query: 107 DVYAAPDC 114 ++A Sbjct: 78 QIFATEAT 85 >gi|162450428|ref|YP_001612795.1| hypothetical protein sce2156 [Sorangium cellulosum 'So ce 56'] gi|161161010|emb|CAN92315.1| hypothetical protein sce2156 [Sorangium cellulosum 'So ce 56'] Length = 313 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 20/178 (11%) Query: 71 EQVLSIDAVLYTHPHADHI-HG----IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC 125 E V + AVL +H H DH+ G I+ + + Y + S Sbjct: 101 EHVPPLSAVLVSHTHFDHLSLGSLEMIEEKTPVLFVPRGALP-YVPDFAFDTIELS---T 156 Query: 126 FKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT 185 ++ + P+ + + G +++ HG G G+ AY Sbjct: 157 WQRWEHDGLRITAVPVKHGGGRYGVDIALGWGGFTGY-VVEYHGVTVYFG---GDTAY-- 210 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGL----HSSHFSLSESLKKIELINPKNAILTH 239 D F + + +D ++ G HS H +E+L+ E + K + H Sbjct: 211 DRKVFTE-TRARFPAIDLALMPIAPIGPRDFMHSRHVDPAEALEACEELGAKWVVPIH 267 >gi|119494441|ref|XP_001264116.1| tRNA processing endoribonuclease Trz1, putative [Neosartorya fischeri NRRL 181] gi|119412278|gb|EAW22219.1| tRNA processing endoribonuclease Trz1, putative [Neosartorya fischeri NRRL 181] Length = 1077 Score = 44.4 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 95/320 (29%), Gaps = 111/320 (34%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R SS ++ + ++D G + Sbjct: 573 EIVTLGTGSSS----------------PSKYRNVSSTLVNVPG----VGSYLLDCGENTI 612 Query: 66 MQV--------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRP-------- 105 Q+ L+E + ++ + +H HADH G I P Sbjct: 613 GQLKRMYEPKKLQEVLQNLRLIWISHLHADHHLGTASVIKEWFRANYPNGVPRAGNVETD 672 Query: 106 ------------------------------------IDV-----YAAPDCMKHLFESFRY 124 + + Y PDC + F Y Sbjct: 673 MRKILQEKRLFVVSEEMMIGWLEEYAGVEDYGFGKLVPLAAHPSYINPDC--KIKTKFTY 730 Query: 125 CFKALDDRTYP--------PIVNPIVIENNDVPI--CMKSAGGVIEAIPILQQHGR---- 170 DD +YP P + + N+ P+ ++ A G+ + + H R Sbjct: 731 RH-CRDDGSYPGWEADGSRPQTSTLDFNNDSSPLAPLLRQATGLADILTTRVSHCRGAMA 789 Query: 171 ---ISSLGFRF---GNVAYCTDVNAFPAESLEKLQNL---DFLIIDALKNGLHSSHFSLS 221 + GF+ G+ T+ +S + D + + A+ H + S Sbjct: 790 VSLVFPDGFKLSFSGDCRPSTNFATIGRDSTVLIHEATFQDDMAVSAIAKK----HSTTS 845 Query: 222 ESLKKIELINPKNAILTHMH 241 E+L+ ++ + +LTH Sbjct: 846 EALEVGRMMQARTVVLTHFS 865 >gi|253689507|ref|YP_003018697.1| hydroxyacylglutathione hydrolase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259492012|sp|C6DC67|GLO2_PECCP RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|251756085|gb|ACT14161.1| hydroxyacylglutathione hydrolase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 251 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N VIVD G + L + L +A+L TH H DH+ G+ L LK + V+ Sbjct: 21 ENRCVIVDPGEASPVLDALAQHALFPEAILLTHHHNDHVGGVHEL----LKHYPNLPVFG 76 Query: 111 APDCMK 116 + K Sbjct: 77 PKETAK 82 >gi|168820342|ref|ZP_02832342.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342897|gb|EDZ29661.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087361|emb|CBY97126.1| Uncharacterized protein MJ0448 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 265 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 15/103 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 D R + YA + + + +D Y Sbjct: 83 DNSRIICHPDIAR-ERYA-AMTFLGITRKIKKLSREVDYSRYR 123 >gi|126649808|ref|ZP_01722044.1| hypothetical protein BB14905_16460 [Bacillus sp. B14905] gi|126593527|gb|EAZ87472.1| hypothetical protein BB14905_16460 [Bacillus sp. B14905] Length = 555 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L V I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDDLLGIDYVIPDYTYLVRNVDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + VY + L L++ I I+ +DV K++ Sbjct: 89 QVNVPVYGGKLALGLLRNK-------LEEHGLLRTTKLIEIKEDDVIKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H + G GN+ + D Sbjct: 137 FFRTTHSIPDAYGIVVKTPPGNIVHTGDFK 166 >gi|124485834|ref|YP_001030450.1| ADP-ribosylation/crystallin J1 [Methanocorpusculum labreanum Z] gi|124363375|gb|ABN07183.1| beta-lactamase domain protein [Methanocorpusculum labreanum Z] Length = 636 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 57/205 (27%), Gaps = 61/205 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG- 61 + T LGC C R++ +S + V++D G Sbjct: 181 QWLRLTTLGC---------------CRQVG------RAAFLLSTPESK-----VLIDCGE 214 Query: 62 ---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 P+ Y ++DAV+ TH H DH + Sbjct: 215 SPGATGAASSPYLNVPEIY------PFTNLDAVVLTHAHLDHSA----FIPLLYRYGYDG 264 Query: 107 DVYAAPDCMK-HLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 VY P Y + PP + + E I + G V + P + Sbjct: 265 PVYTTPATRDLATMLQLDYLDVNNKEDRAPPYSSNEIREFVKHTIAL-GYGDVTDIAPDM 323 Query: 166 Q--QHGRISSLG-----FRFGNVAY 183 + H LG F GN Y Sbjct: 324 KLTLHNAGHILGSAIAHFNVGNGVY 348 >gi|134045242|ref|YP_001096728.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C5] gi|132662867|gb|ABO34513.1| beta-lactamase domain protein [Methanococcus maripaludis C5] Length = 422 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S V + V++D G D L + +DAVL +H H DH I + K+ Sbjct: 16 SCVEINTKKSKVLIDCGMDPSDNGLPDINDSDVDAVLVSHAHLDHCGAIP---YFNFKK- 71 Query: 104 RPIDVYAAPDCMKHLFE 120 +Y P ++ Sbjct: 72 ----IYCNPPTADLMYN 84 >gi|330465730|ref|YP_004403473.1| beta-lactamase domain-containing protein [Verrucosispora maris AB-18-032] gi|328808701|gb|AEB42873.1| beta-lactamase domain-containing protein [Verrucosispora maris AB-18-032] Length = 215 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 29/165 (17%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQ-KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 DAVL TH H DH+ + +RP ++ K L ++ Sbjct: 43 DAVLITHEHPDHV----DAEAINRQLARRPFVIHGPTSVSKVLGDA---------AEALR 89 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAES 194 P+ VP+ + I + ++G+ F +V Y D P + Sbjct: 90 PVSPGESFTAAGVPVRAYGGRHAVIHPDIPV----VDNIGYLFNDVVYHPGDALFVPQDV 145 Query: 195 LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 +D L +H+ SE + I + P+ H Sbjct: 146 P----------VDTLFAPIHAPWSKFSEVVDFIRAVAPRRVFALH 180 >gi|313665501|ref|YP_004047372.1| hypothetical protein MSB_A0633 [Mycoplasma leachii PG50] gi|312949798|gb|ADR24394.1| conserved hypothetical protein [Mycoplasma leachii PG50] Length = 610 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 81 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLVENQKKIKALFITHGHEDHIGGIQ----- 135 Query: 99 FLKQKRPID-VYAAPDCMKHLFES 121 +L Q+ I +YA + + Sbjct: 136 YLVQQVKIPIIYAPKLAAMLIRDR 159 >gi|300312891|ref|YP_003776983.1| Zn-dependent beta-lactamase domain hydrolase [Herbaspirillum seropedicae SmR1] gi|300075676|gb|ADJ65075.1| Zn-dependent beta-lactamase domain hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 276 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 10/69 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQV--LSIDAVLYTHPHADH 88 S++ I+ R TV+VD G + R V ID VL TH H DH Sbjct: 48 PSAIHINCYLIRSPTQTVLVDAGAGGFKQWGGRLQDNLKRAGVLPSDIDTVLLTHAHPDH 107 Query: 89 IHGIDGLRG 97 I G+ G Sbjct: 108 IGGLLDSAG 116 >gi|260434159|ref|ZP_05788130.1| metallo-beta-lactamase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417987|gb|EEX11246.1| metallo-beta-lactamase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 555 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 55/197 (27%), Gaps = 33/197 (16%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYM--------------QVLREQVLSIDAVLYTHPHAD 87 + G ++VD G F L+E+ ++A+ TH H D Sbjct: 21 AYVYGYGAPGKERLILVDLGVTFPDMDTTPGVDLIYADISWLKERADRLEAIFVTHAHED 80 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENND 147 H+ + + ++A + +D P I+ Sbjct: 81 HVGAV----ALCHEMLGA-PIHARAFTANIARKKMEEA-GHPEDAVRTVSAWPEQIKAGP 134 Query: 148 VPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVAYCTDVNAFPAESLEKLQ---- 199 + I A+ I GRI G F+ T V P + + Sbjct: 135 FTVGFLPVSHSIPESAALVIDTPAGRIVHSGDFKLD----TTPVVGEPFDEALWAEVAKP 190 Query: 200 NLDFLIIDALK-NGLHS 215 + L+ D+ H Sbjct: 191 GVKALVCDSTNVFSPHP 207 >gi|146099573|ref|XP_001468678.1| cleavage and polyadenylation specificity factor [Leishmania infantum] gi|134073046|emb|CAM71766.1| putative cleavage and polyadenylation specificity factor [Leishmania infantum JPCM5] Length = 756 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 51/190 (26%), Gaps = 37/190 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + V++D G L + ID VL TH H DH Sbjct: 39 RSCVVVRYKG-----RGVMLDCGNHPAKSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGA 93 Query: 92 IDGLRGYFLKQ---KRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 + YF Q K I + K + F D + + Sbjct: 94 L----PYFCNQTSFKGRI--FMTSATKAFYKMVMNDFLRIGAGASDLVTSEWLQSTIDRI 147 Query: 146 NDVPICMKSAGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 V + I P H + G R Y D + P L + Sbjct: 148 ETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVDIAGMR---ALYTGDFSRVPDRHLLGAE 204 Query: 200 ----NLDFLI 205 + D LI Sbjct: 205 VPPYSPDILI 214 >gi|83319447|ref|YP_424591.1| metallo-beta-lactamase superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283333|gb|ABC01265.1| metallo-beta-lactamase superfamily protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 611 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L E I A+ TH H DHI GI Sbjct: 82 DNELIMIDAGVKFPESTMLGVSAVIPDYSYLVENQKKIKALFITHGHEDHIGGIQ----- 136 Query: 99 FLKQKRPID-VYAAPDCMKHLFES 121 +L Q+ I +YA + + Sbjct: 137 YLVQQVKIPVIYAPKLAAMLIRDR 160 >gi|23098863|ref|NP_692329.1| hypothetical protein OB1408 [Oceanobacillus iheyensis HTE831] gi|22777090|dbj|BAC13364.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 555 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I ++ TH H DHI GI FL + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYTYLVQNEDKIKGLIITHGHEDHIGGIP-----FLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + + +YA P + + L++ I I+ +D+ K++ Sbjct: 89 EINVPIYAGPLAIGLIRNK-------LEEHGLLRNAKLITIQEDDIIKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGVVVKTPPGNIVHTGDFK 166 >gi|121605197|ref|YP_982526.1| beta-lactamase domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594166|gb|ABM37605.1| beta-lactamase domain protein [Polaromonas naphthalenivorans CJ2] Length = 452 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 22/163 (13%) Query: 50 RGSNTTVIVDTGPDF-YMQV-LRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 R +++++VD G Y Q+ LR + IDAV+ TH H DH + Sbjct: 20 RQGSSSLLVDCGLFQGYKQLRLRNWSPLPVEPARIDAVILTHAHIDHSG----YLPLLAR 75 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 Q VY +P C L++ +N + + + + G Sbjct: 76 QGFSGKVYCSPATFDLCSILLPDCGYLLEEE--AEYLNRHKKSKHSPALPLYTQGDAQRC 133 Query: 162 I----PILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQN 200 + P+ + G + G R A T P S +L N Sbjct: 134 LKLFEPVAYRTGWQPAEGLR----ATLTPSGHMPGSSFVRLDN 172 >gi|103485570|ref|YP_615131.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] gi|98975647|gb|ABF51798.1| beta-lactamase-like protein [Sphingopyxis alaskensis RB2256] Length = 347 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 72/214 (33%), Gaps = 30/214 (14%) Query: 43 KISRVSERGSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 ++ ++ V+VD G M +L SIDA + +H H DH G + G Sbjct: 73 LLADSRVGDASRRVLVDFGYTAEVLANNMGMLGIDPSSIDASVLSHGHLDHYGGFPAMTG 132 Query: 98 YFLKQKRPIDVYA---------------APDCMKHL-FESFRYCFKALDDRTYPPIVNPI 141 K+ RP+ +Y P M L + + P IV Sbjct: 133 SAEKRGRPLPLYVGGEETFCERVAMIGDPPPVMGILDRAALTKAGYEVRISPTPQIVADQ 192 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRFG--NVAYCTDVNAFPAESLEKL 198 +P+ AIP + G G R ++A TD + + Sbjct: 193 AFTTGIIPLETFER----TAIPTRMRPGAGCERTGLRSDKRDLAEVTDDGEHELATCYAI 248 Query: 199 QNLDFLII-DALKNGLHSSHFSLSESLKKIELIN 231 + L ++I G+ +S ++++ I + Sbjct: 249 KGLGLVVIASCSHRGVLNSVRR-AQAISGISKVQ 281 >gi|302680703|ref|XP_003030033.1| hypothetical protein SCHCODRAFT_57421 [Schizophyllum commune H4-8] gi|300103724|gb|EFI95130.1| hypothetical protein SCHCODRAFT_57421 [Schizophyllum commune H4-8] Length = 353 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 12/108 (11%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM-----QVLR 70 GVP D C S I + + DTGPD + ++ Sbjct: 48 TGVPTFDFDHFCCGAHG-------FSALIETRVGEEPSQITLFDTGPDTLSLPRNIRAMQ 100 Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +I V+ +H H+DH G+ G +DV+ + + Sbjct: 101 INPNAISRVITSHWHSDHTGGLLSFLGLRSDPGCAVDVHPDRPIARGI 148 >gi|229827982|ref|ZP_04454051.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM 14600] gi|229792576|gb|EEP28690.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM 14600] Length = 642 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 26/83 (31%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N ++VD G F L+E I TH H DHI I Y Sbjct: 118 GNDIIVVDCGLAFPDDDMYGVDLVIPDITYLKENESKIRGFFITHGHEDHIGAI----PY 173 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 L + +YA M + Sbjct: 174 VLNEINA-PIYATRLTMAIIEHK 195 >gi|166031161|ref|ZP_02233990.1| hypothetical protein DORFOR_00847 [Dorea formicigenerans ATCC 27755] gi|166029008|gb|EDR47765.1| hypothetical protein DORFOR_00847 [Dorea formicigenerans ATCC 27755] Length = 223 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 10/134 (7%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDG-L 95 L I + TV+VD G + E+ L++ A+L TH H DHI GID L Sbjct: 28 NCYLLI----NEETKDTVVVDPGGHSKKFTAYIEEEKLNLVAILLTHGHFDHIMGIDSIL 83 Query: 96 RGYFLKQ---KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICM 152 + + + + + P+ + Y F + + Sbjct: 84 ENWNIPVYVEEEDLPIMTDPELNLSSSYTNGYSFDGAKPLKDGQKLELAGETIEVIHTPG 143 Query: 153 KSAGGVIEAIPILQ 166 + GG +P+ Sbjct: 144 HTMGGCCYYLPVEH 157 >gi|16082538|ref|NP_394086.1| metal-dependent RNase [Thermoplasma acidophilum DSM 1728] Length = 639 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 12/109 (11%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--------FYMQ 67 G P + W + RS+ +S + + +++ GPD + Sbjct: 170 SGPPMVGETWVRLTALGGHSEVGRSATLVSTKNSKVLIDCGMMNVGPDADPWDAAPYLYV 229 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + + +IDAV+ TH H DH L K VY P Sbjct: 230 PEVQPLSTIDAVILTHAHLDHSG----LLPLLFKYGYDGPVYMTPPTRD 274 >gi|309379267|emb|CBX22040.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 210 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGKAVLTDVGGDVPFLLQALANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + + + + L +S P +E + + Sbjct: 70 ML-----KTHKVPILGPHREDEFLLQSLPQTTAQYGFPVSPAFSPNRWLEEGETLAVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|296272600|ref|YP_003655231.1| metal dependent hydrolase [Arcobacter nitrofigilis DSM 7299] gi|296096774|gb|ADG92724.1| metal dependent hydrolase [Arcobacter nitrofigilis DSM 7299] Length = 279 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 14/99 (14%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQVL--SIDAVLYTH 83 CD + KN SL I N ++ DTG +F + + I+ V+ +H Sbjct: 12 CDLKDLKNEHG-LSLYIEM-----DNHHLLFDTGRSDNFIKNAEKLGIPLEKIEYVIISH 65 Query: 84 PHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 H DHI G+ K K +Y + + SF Sbjct: 66 AHQDHIGGLINFLRINKKAK----IYMKKQVFEEYYFSF 100 >gi|296110549|ref|YP_003620930.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] gi|295832080|gb|ADG39961.1| metallo-beta-lactamase superfamily protein (putative) [Leuconostoc kimchii IMSNU 11154] Length = 606 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 20/121 (16%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 I V TH HAD I + + Q+ ++ + ++ + + D Sbjct: 58 NSDKIAGVFLTHGHADAIGALP-----YFLQQVQAPIFGSELTIELAKLAIKEQEALKDY 112 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDV 187 Y I I+ G + H SLG G V Y D Sbjct: 113 NDYHIINEKTEID-----------FGKVTVSFFNTTHSIPDSLGIVLGTPYGQVVYTGDF 161 Query: 188 N 188 Sbjct: 162 K 162 >gi|294646944|ref|ZP_06724563.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|292637714|gb|EFF56113.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] Length = 223 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 30/198 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + ++ + +D D+ + Q D +L TH H DH + Sbjct: 25 ASLLLDYAGQK-----IFIDPVSDYADYI---QQPKADFILITHEHGDHF----DTKAIA 72 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + A P+C K L + + + + I +E VP + G Sbjct: 73 AIETNQTKIIANPNCRKMLNRG-----QEMKNGDVLQLAKDIKLEA--VPAYNTTPGRD- 124 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + P + +G I +LG G Y D P L +++++D + + Sbjct: 125 KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LNQVKDIDIAFLPVNQPYT----M 175 Query: 219 SLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 176 TPEQAIRAAKIIKPRVLY 193 >gi|255077292|ref|XP_002502290.1| predicted protein [Micromonas sp. RCC299] gi|226517555|gb|ACO63548.1| predicted protein [Micromonas sp. RCC299] Length = 357 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 28/95 (29%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+S P R + + + + +V VDTG Sbjct: 7 EIIFLGTGSSA----------------PAKYRNVTGIVVDQK----DKGSVFVDTGEGTL 46 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGI 92 Q++R + V + V +H HADH G+ Sbjct: 47 GQLVRCVGVDAADDIVRRLKCVWISHIHADHHVGL 81 >gi|159905675|ref|YP_001549337.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159887168|gb|ABX02105.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 422 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S V + +++D G D L + + +DAVL +H H DH I + K+ Sbjct: 16 SCVEINTKKSKILIDCGMDPSDNGLPDIKDSDVDAVLVSHAHLDHCGAIP---YFNFKK- 71 Query: 104 RPIDVYAAPDCMKHLFE 120 +Y P ++ Sbjct: 72 ----IYCNPPTADLMYN 84 >gi|329123329|ref|ZP_08251894.1| hydroxyacylglutathione hydrolase [Haemophilus aegyptius ATCC 11116] gi|327471329|gb|EGF16781.1| hydroxyacylglutathione hydrolase [Haemophilus aegyptius ATCC 11116] Length = 238 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 29 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 84 Query: 115 MK 116 K Sbjct: 85 EK 86 >gi|325571581|ref|ZP_08147081.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] gi|325156057|gb|EGC68253.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus ATCC 12755] Length = 559 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 29/154 (18%) Query: 46 RVSERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGI 92 + + +++D G F + + + + ++ TH H DHI GI Sbjct: 25 CYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSYIVQNLPKVKGLIVTHGHEDHIGGI 84 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENN 146 +L ++ I +YA P + + D + + ++ I Sbjct: 85 P-----YLLREANIPIYAGPLALALITNKLDEHGLLRDAELHEINEDTVIRFRKTSISFF 139 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + A GV+ P G I + G F+F Sbjct: 140 RTTHSIPDALGVVVKTP----SGNIVATGDFKFD 169 >gi|296314833|ref|ZP_06864774.1| metallo-beta-lactamase domain protein [Neisseria polysaccharea ATCC 43768] gi|296838386|gb|EFH22324.1| metallo-beta-lactamase domain protein [Neisseria polysaccharea ATCC 43768] Length = 210 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQELANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHREDEFLLQSLPQTTAQYGFPVSPAFAPTRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|225572894|ref|ZP_03781649.1| hypothetical protein RUMHYD_01085 [Blautia hydrogenotrophica DSM 10507] gi|225039759|gb|EEG50005.1| hypothetical protein RUMHYD_01085 [Blautia hydrogenotrophica DSM 10507] Length = 532 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTG----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + +VD G PD+Y V + + +D +L TH H DH I Sbjct: 15 SCYYLEAAGKKFLVDCGMEQGPDYYENVEIPVNLGEVDFLLLTHAHIDHSGNI----PAI 70 Query: 100 LKQKRPIDVYAAPDCMK 116 + VYA Sbjct: 71 YAKGFQGPVYATEATCD 87 >gi|221234546|ref|YP_002516982.1| alkyl sulfatase [Caulobacter crescentus NA1000] gi|220963718|gb|ACL95074.1| alkyl sulfatase [Caulobacter crescentus NA1000] Length = 651 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 24/175 (13%) Query: 50 RGSNTTVIVDT-----GPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQ 102 RG +++D ++++ E++ + AV+YTH H+DH G+ G+ + Sbjct: 128 RGDTGWIVIDPLTMQETARAALELVNEKLGKLPVTAVVYTHSHSDHFGGVRGVVDEADVK 187 Query: 103 KRPIDVYAAPDCMKHLF-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + A M+ + + + PP V + I A Sbjct: 188 SGKVPIVAPKGFMEEVAAENILAGNAMSRRAQYQFGVMLPPGVEGQITAG----IGQNIA 243 Query: 156 GGVIEAIP---ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G I IP I+ G+ +L Y A PAE L D I+D Sbjct: 244 RGSITLIPPTVIIDHTGQELTLDGVKVRFQYTPSTEA-PAEM--NLYFPDLRILD 295 >gi|170760819|ref|YP_001785878.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407808|gb|ACA56219.1| metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 290 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGI 92 ++DTG ++Y + V ID V+ TH H DH G+ Sbjct: 48 GKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGL 93 >gi|170755132|ref|YP_001780178.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] gi|169120344|gb|ACA44180.1| metallo-beta-lactamase family protein [Clostridium botulinum B1 str. Okra] Length = 290 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGPDFYMQ-----VLREQVLSIDAVLYTHPHADHIHGI 92 ++DTG ++Y + V ID V+ TH H DH G+ Sbjct: 48 GKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGL 93 >gi|187924847|ref|YP_001896489.1| hydroxyacylglutathione hydrolase [Burkholderia phytofirmans PsJN] gi|187716041|gb|ACD17265.1| hydroxyacylglutathione hydrolase [Burkholderia phytofirmans PsJN] Length = 263 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP-DCMKHLFES 121 + A+L TH H DH+ G+ L + + VY + ++HL Sbjct: 47 RLSAILLTHHHQDHVGGVADLL-----NGQAVPVYGPAGEAIEHLTHR 89 >gi|16125787|ref|NP_420351.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] gi|13422923|gb|AAK23519.1| metallo-beta-lactamase family protein [Caulobacter crescentus CB15] Length = 647 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 24/175 (13%) Query: 50 RGSNTTVIVDT-----GPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQ 102 RG +++D ++++ E++ + AV+YTH H+DH G+ G+ + Sbjct: 124 RGDTGWIVIDPLTMQETARAALELVNEKLGKLPVTAVVYTHSHSDHFGGVRGVVDEADVK 183 Query: 103 KRPIDVYAAPDCMKHLF-------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + + A M+ + + + PP V + I A Sbjct: 184 SGKVPIVAPKGFMEEVAAENILAGNAMSRRAQYQFGVMLPPGVEGQITAG----IGQNIA 239 Query: 156 GGVIEAIP---ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G I IP I+ G+ +L Y A PAE L D I+D Sbjct: 240 RGSITLIPPTVIIDHTGQELTLDGVKVRFQYTPSTEA-PAEM--NLYFPDLRILD 291 >gi|119384960|ref|YP_916016.1| beta-lactamase domain-containing protein [Paracoccus denitrificans PD1222] gi|119374727|gb|ABL70320.1| beta-lactamase domain protein [Paracoccus denitrificans PD1222] Length = 558 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 42/166 (25%), Gaps = 37/166 (22%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHAD 87 + + G ++VD G F L IDA+ TH H D Sbjct: 20 AYVYGYGQPGRERLIVVDLGVTFGDMDSAPGIDLIMADVAWLEANRDRIDAIFITHGHED 79 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD-DRTYPPIVNPIVIENN 146 H+ + L + ++P+ F L + P+ + Sbjct: 80 HVGALGLLWP---RLQKPVHC-----------RRFTGALARLKLEEAGQPVDQLHI---- 121 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 P G + H S G + + D Sbjct: 122 HAPRPDVVTAGPFRVQFVPISHSIPESSALIIDTPAGRIVHTGDFK 167 >gi|329113552|ref|ZP_08242332.1| Putative protein YcbL [Acetobacter pomorum DM001] gi|326697074|gb|EGE48735.1| Putative protein YcbL [Acetobacter pomorum DM001] Length = 223 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 R S+ + VIVD G D + L++ +L ++A+L TH H DH G+ Sbjct: 19 RQNCSVL----WNEKTRKAVIVDAGGDANVLLDFLKKNILEVEAILLTHGHLDHAGGV 72 >gi|312135645|ref|YP_004002983.1| DNA internalization-related competence protein comec/rec2 [Caldicellulosiruptor owensensis OL] gi|311775696|gb|ADQ05183.1| DNA internalization-related competence protein ComEC/Rec2 [Caldicellulosiruptor owensensis OL] Length = 752 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 45/211 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADHIH 90 S I+ ++++DTGP++ +L+ V +D ++ TH H DHI Sbjct: 521 SSLITYKG-----FSMLIDTGPEYEDFSSLKRVVLPYILKRGVAKLDILVLTHKHNDHIG 575 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 D L + + + + L + + L + + + V D+ Sbjct: 576 DFDYLLDEMEVDR----IVTSKEVY--LENAHK-----LKGQEVVLVDDLKVYRYKDLKA 624 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFGNVA--YCTDVNAFPAESLEKLQ--NLDFLII 206 P+ Q + FGN + + D + +E ++ NL I Sbjct: 625 YF--------IPPVEQDENSSVVVKLTFGNFSMLFTGDASY--ESEIEYMKRFNLHATI- 673 Query: 207 DALKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S + S + +E + PK A++ Sbjct: 674 --LKVGHHGS--STATSEEFLESVKPKVAVI 700 >gi|269218612|ref|ZP_06162466.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269211723|gb|EEZ78063.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 760 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 50 RGSNTTVIVDTGPDFY---MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 R T++VD GP V V ID ++ TH H+DHI G+ + Sbjct: 533 RVRGKTIMVDVGPQGKAAAECVEAAGVEKIDILVLTHGHSDHIGGLPEV 581 >gi|120603149|ref|YP_967549.1| beta-lactamase domain-containing protein [Desulfovibrio vulgaris DP4] gi|120563378|gb|ABM29122.1| beta-lactamase domain protein [Desulfovibrio vulgaris DP4] Length = 554 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 31/149 (20%) Query: 44 ISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSID----------AVLYTHPHADHIH 90 ++ +++TV++D G PD Y + + D ++ TH H DHI Sbjct: 21 LNCQVWSTADSTVLIDCGLMFPDDYHLGVDVVIPRFDHILQQRDKVRGIILTHGHEDHIG 80 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 + + + R I ++ + + L + +E V Sbjct: 81 AL----PWLVPHLRGIPIFGSRFTLA------------LVEHKLREHGLADRVEFVPVTP 124 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFG 179 A G + + H I G+ G Sbjct: 125 GTPLALGDMTFHFLPVCHSIIE--GYAVG 151 >gi|47459453|ref|YP_016315.1| hydrolase [Mycoplasma mobile 163K] gi|47458783|gb|AAT28104.1| predicted hydrolase [Mycoplasma mobile 163K] Length = 604 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 16/111 (14%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+ +I A+ TH H DHI GI L K ++A ++ L F Sbjct: 55 LKANQDNIQALFITHGHEDHIGGIPYLVATVKISK----IFAPKIAIQFLKLKF------ 104 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + + I IE + + G + QH + G RF Sbjct: 105 -QEHNILQKIEFIEIEKDSI-----HKFGDVVVDFWTAQHSIPDAFGIRFK 149 >gi|315150115|gb|EFT94131.1| conserved domain protein [Enterococcus faecalis TX0012] Length = 218 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + QK PI V P SFR K L Sbjct: 8 QGVKRLDEVIITHAHEDHFGDL-----LAFAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 62 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N + + S GG ++I Q LG R + + Sbjct: 63 KSGTDCRPILAPKRI-NGPISFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 113 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 114 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 165 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 166 GLNNRFKHPHQETLATL 182 >gi|296333363|ref|ZP_06875816.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675131|ref|YP_003866803.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149561|gb|EFG90457.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413375|gb|ADM38494.1| putative metal-binding hydrolase [Bacillus subtilis subsp. spizizenii str. W23] Length = 211 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%) Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 Q ++E+ L+ A+L TH H DHI +D +R +K I VY + Sbjct: 38 QYIKEKGLTPLAILLTHAHFDHIGALDEVR-----EKWDIPVYLHQN 79 >gi|260462247|ref|ZP_05810491.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] gi|259032107|gb|EEW33374.1| beta-lactamase domain protein [Mesorhizobium opportunistum WSM2075] Length = 556 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 64/223 (28%), Gaps = 49/223 (21%) Query: 48 SERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDG 94 + +I+D G F + + E + ++ ++ TH H DH + Sbjct: 30 GPPSAREWIIIDVGVTFPDAAHPGVDLILPDTRFIEENLANLRGIIITHAHEDHYGALLD 89 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 K V+ P L P + + + K Sbjct: 90 TWP-----KLKAPVWMTPFSAGLLE-------AKRQGEQGAPKIPLTIYRAGE-----KF 132 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------Q 199 G E I H + G V + D P ++ + Sbjct: 133 TVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPKTDEARFRAYGDK 192 Query: 200 NLDFLIID---ALKNGLHSSHFSLSESLK-KIELINPKNAILT 238 + LI D AL+ G S ++ E LK I+ + A+ T Sbjct: 193 GVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTT 235 >gi|302873351|ref|YP_003841984.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|307688479|ref|ZP_07630925.1| beta-lactamase domain-containing protein [Clostridium cellulovorans 743B] gi|302576208|gb|ADL50220.1| beta-lactamase domain protein [Clostridium cellulovorans 743B] Length = 273 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 20/114 (17%) Query: 41 SLKISRVSERGSNTTVIVDT------GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 S+ + N V++D DF + ID V+ TH H DH G++ Sbjct: 30 SIIVESQ-----NKLVVIDVPLLRPYSKDFRAYANQLG-KPIDRVIITHAHPDHWAGLEA 83 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + +Y+ + + + E+ + I + ++ NN + Sbjct: 84 FED--------LPIYSLSETQEEIQENGEWMLTYHRSLHGDLITDKKIVPNNII 129 >gi|229845334|ref|ZP_04465466.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae 6P18H1] gi|229811787|gb|EEP47484.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae 6P18H1] Length = 233 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|254519277|ref|ZP_05131333.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226913026|gb|EEH98227.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 555 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F + L + I + TH H DHI + Y Sbjct: 30 NDIVVIDCGLKFPDEDMFGIDLVIPDISYLLKNKDKIRGIFLTHGHEDHIGAL----PYV 85 Query: 100 LKQKRPIDVYAAPDCM 115 L+Q + VY + Sbjct: 86 LRQL-DVPVYGTKLTL 100 >gi|224499713|ref|ZP_03668062.1| hypothetical protein LmonF1_08474 [Listeria monocytogenes Finland 1988] Length = 555 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|168235992|ref|ZP_02661050.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737536|ref|YP_002115899.1| beta-lactamase domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713038|gb|ACF92259.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290909|gb|EDY30263.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 265 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDDSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|150402550|ref|YP_001329844.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C7] gi|150033580|gb|ABR65693.1| beta-lactamase domain protein [Methanococcus maripaludis C7] Length = 422 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLS-IDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S V + +++D G D L + S +DAVL +H H DH I + K+ Sbjct: 16 SCVEINTKKSKILIDCGMDPSDNGLPDITDSDVDAVLVSHAHLDHCGAIP---YFNFKK- 71 Query: 104 RPIDVYAAPDCMKHLFE 120 +Y P ++ Sbjct: 72 ----IYCNPPTADLMYN 84 >gi|71281021|ref|YP_269337.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] gi|71146761|gb|AAZ27234.1| metallo-beta-lactamase family protein [Colwellia psychrerythraea 34H] Length = 451 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 40/120 (33%) Query: 5 YHFTILG-CGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 + T LG G G S+ S T ++VD G Sbjct: 1 MNITFLGGTGTVTG---------------------------SKYFVETSTTKILVDCGLY 33 Query: 64 FYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + LR + + S+DA++ TH H DH KQ VYA + Sbjct: 34 QGYKWLRARNREPLPLDLKSLDAIVLTHAHLDHSG----FIPALYKQGFRGHVYAHQATI 89 >gi|146317819|ref|YP_001197531.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 05ZYH33] gi|146320013|ref|YP_001199724.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis 98HAH33] gi|223933810|ref|ZP_03625779.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|253751069|ref|YP_003024210.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|253752970|ref|YP_003026110.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|253754793|ref|YP_003027933.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|302023240|ref|ZP_07248451.1| metallo-beta-lactamase superfamily protein [Streptococcus suis 05HAS68] gi|330832008|ref|YP_004400833.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis ST3] gi|145688625|gb|ABP89131.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 05ZYH33] gi|145690819|gb|ABP91324.1| Predicted hydrolase of the metallo-beta-lactamase superfamily [Streptococcus suis 98HAH33] gi|223897523|gb|EEF63915.1| beta-lactamase domain protein [Streptococcus suis 89/1591] gi|251815358|emb|CAZ50929.1| metallo-beta-lactamase superfamily protein [Streptococcus suis SC84] gi|251817257|emb|CAZ54985.1| metallo-beta-lactamase superfamily protein [Streptococcus suis BM407] gi|251819215|emb|CAR44414.1| metallo-beta-lactamase superfamily protein [Streptococcus suis P1/7] gi|292557614|gb|ADE30615.1| metallo-beta-lactamase superfamily protein domain protein [Streptococcus suis GZ1] gi|319757325|gb|ADV69267.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis JS14] gi|329306231|gb|AEB80647.1| metallo-beta-lactamase superfamily hydrolase [Streptococcus suis ST3] Length = 559 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + + ++ TH H DHI GI FL ++ + +YA P + + L+ Sbjct: 64 ENLDRVKGLVITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIR-------GKLE 111 Query: 131 DRTYPPIVNPIVIENN---DVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFG 179 + I +N S +IP + G+I G F+F Sbjct: 112 EHGLLRDATLHEINHNTELTFKHLKVSFFRTTHSIPEPLGIVVDTPQGKIVCTGDFKFD 170 >gi|323697438|ref|ZP_08109350.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio sp. ND132] gi|323457370|gb|EGB13235.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio desulfuricans ND132] Length = 551 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 36/157 (22%) Query: 50 RGSNTTVIVDTGPDFYMQ--------------VLREQVLSIDAVLYTHPHADHIHGIDGL 95 R + V+VD G F VLR + ++ ++ TH H DHI + Sbjct: 25 RTEKSLVMVDCGLMFPEDYHFGVDVVIPCFDYVLRNK-RQLNGIVLTHGHEDHIGAL--- 80 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 + L Q + VY + + + L + + + D + Sbjct: 81 -PW-LLQNVDVPVYGSEFTLGLVENK-------LKEHDLDRWADLRPVRPYD-----RLL 126 Query: 156 GGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G H I G G V + D Sbjct: 127 LGDFRFNFFPVCHSIIEGFGLGIETPAGRVVHTGDFK 163 >gi|312128375|ref|YP_003993249.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311778394|gb|ADQ07880.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 262 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 34/196 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSID------AVLYTHPHADHIHGIDG 94 S+ I + + ++ D G + + + +D AV+ +H H DH G+ Sbjct: 23 SILIEK-----DDKKILFDCGQT---NAIVKNIEKMDVGFDFDAVVLSHAHYDHTGGL-- 72 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + I V+ K Y F + ++ + + + Sbjct: 73 -KFLVERTGCDIWVHNGFFDKKFAKREGEYKFIGENFEA----LDMARFKVVNEDVYEIF 127 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDF-LIIDALKNGL 213 G + + G+ S+ + + + +D+ F +SL ++ LI+ Sbjct: 128 DGIFV----VNVTSGKESNEFYILKDGQFQSDL-FFEEQSLVVKEDDKLILIVGC----- 177 Query: 214 HSSHFSLSESLKKIEL 229 SH + ++K+E Sbjct: 178 --SHNGIENIVEKVEK 191 >gi|309775515|ref|ZP_07670515.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916609|gb|EFP62349.1| metallo-beta-lactamase family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 203 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 11/80 (13%) Query: 51 GSNTTVIV-DTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + V++ D G + + Q +DA++ TH H DHI G+D L +K Sbjct: 20 WEDHHVLIIDPGSKSAKLQETIDSQDGIVDAIVLTHGHFDHIAGVDALV-----KKYHCP 74 Query: 108 VYAAPDCMKHLFE---SFRY 124 VY M L + +F Y Sbjct: 75 VYINELDMAMLQDPMLNFSY 94 >gi|309812544|ref|ZP_07706292.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] gi|308433522|gb|EFP57406.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] Length = 560 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 34/138 (24%) Query: 52 SNTTVIVDTG--------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +I+D G PDF L++++ I+A++ TH H DHI + Sbjct: 40 GGRLLIIDCGVLFPEDHPGVDLILPDF--DYLKDRLDDIEAIVLTHGHEDHIGAV----P 93 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 Y L+ K I + + + + K R Y V +E G Sbjct: 94 YLLRMKNDIPLIGSTLTLALIEAK----LKEHRIRPYTMAVKEGQLE----------KIG 139 Query: 158 VIEAIPILQQHGRISSLG 175 + + H +L Sbjct: 140 PFDCEFVAVNHSIPDALA 157 >gi|307299237|ref|ZP_07579038.1| conserved hypothetical protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915033|gb|EFN45419.1| conserved hypothetical protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 283 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 71/231 (30%), Gaps = 48/231 (20%) Query: 55 TVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGI---------------DGLRGYF 99 V+ D G VL V +I + TH H DHI G+ LR F Sbjct: 21 RVLFDVGEGI-STVLGNSVYAIKDIFLTHGHVDHISGLWGLINTRNTAMGDRNKQLRINF 79 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 R I+ Y + + L+ + + P +K G I Sbjct: 80 PSGNRAIEAYLDFIIGMNPRLRYNMILNPLNVGDEVYLRTAGSFRRHVTPFKVKHTIGEI 139 Query: 160 -----------------------EAIPILQQHGRISSLGFRFGNVAYCT-DVNAFPAESL 195 E ++++ GR + + + D A P Sbjct: 140 SYGYHVYEERRKLKDIYGGLPSKEIASVVKEKGREAITDTYLQKIVTISGDTFALPP--- 196 Query: 196 EKLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIEL-INPKNAILTHMH 241 E + N + L+ + K+ + +H S+ E + + K IL H+ Sbjct: 197 EVISNSETLLHECTFLVGKDRRNQNHSSIDEVICTVRQSSGIKRLILYHIS 247 >gi|261414729|ref|YP_003248412.1| beta-lactamase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371185|gb|ACX73930.1| beta-lactamase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326347|gb|ADL25548.1| metallo-beta-lactamase family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 301 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Query: 42 LKISRVSERGSNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 +S + ++ D G + L+ SI V TH HADHI G+ Sbjct: 102 ASVSTFLVKTDGKYILFDAGLGAWGGQLLKRLDALKVNPDSIGLVYLTHFHADHIAGL 159 >gi|77166162|ref|YP_344687.1| metallo-beta-lactamase superfamily protein [Nitrosococcus oceani ATCC 19707] gi|254435422|ref|ZP_05048929.1| metallo-beta-lactamase superfamily protein [Nitrosococcus oceani AFC27] gi|76884476|gb|ABA59157.1| Metallo-beta-lactamase superfamily [Nitrosococcus oceani ATCC 19707] gi|207088533|gb|EDZ65805.1| metallo-beta-lactamase superfamily protein [Nitrosococcus oceani AFC27] Length = 316 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 61/216 (28%), Gaps = 31/216 (14%) Query: 58 VDTGP-----DFYMQVLREQV--LSIDAVLYTHPHADHIHG-------IDGLRGYFLKQK 103 +DTGP ++ ++ ID +L TH H DH G + + + Sbjct: 39 IDTGPTPSVSRLMDALVTLKITPQQIDYILLTHIHLDHAGGAGELVRRLPHAQVVVHPRG 98 Query: 104 RP--IDVYAAPDCMKHLFESFR-YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 ID + + F+ L P + I+ ++ + + + Sbjct: 99 ASHLID---PEKLVAGTKAVYGDKIFRRLYGEVVPIPADRIITIEDEAWLELGGSRLKFI 155 Query: 161 AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 P H G A D + L + + HF Sbjct: 156 HTPGHALHHYCIIDRDSRGIFA--GDTFGISYRDFDTLAG------EFIFPATTPVHFDP 207 Query: 221 SESLKKIELI---NPKNAILTHMHVDLDYDMVLKST 253 + IE + P+ LTH D + K Sbjct: 208 DAAHASIERLMGYEPEGIYLTHYSRVTDLKRLAKDL 243 >gi|73666790|ref|YP_302806.1| Beta-lactamase-like [Ehrlichia canis str. Jake] gi|72393931|gb|AAZ68208.1| Beta-lactamase-like protein [Ehrlichia canis str. Jake] Length = 544 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F +++ ++ ++ TH H DHI GI Sbjct: 31 DGKWIIIDFGAGFADDNMPGIDMIVADISFIKKNRKNLLGIVLTHAHEDHIGGIQ----- 85 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 +L +YA L Sbjct: 86 YLWSDLQCPIYATKFTSALLQAK 108 >gi|88706452|ref|ZP_01104157.1| metallo-beta-lactamase family protein [Congregibacter litoralis KT71] gi|88699388|gb|EAQ96502.1| metallo-beta-lactamase family protein [Congregibacter litoralis KT71] Length = 460 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 19/84 (22%) Query: 52 SNTTVIVDTGPDF-YM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 + ++VD G F Q + E ++ ++ TH H DHI + Sbjct: 30 NGAWLMVDCGITFERDSHRVRPRVQTPDPQFIVEHRDALAGIVLTHAHEDHIGAMP---- 85 Query: 98 YFLKQKRPIDVYAAPDCMKHLFES 121 L ++ P+ VY P + L Sbjct: 86 -LLWERFPVPVYTTPFTAEVLRRK 108 >gi|330941884|gb|EGH44611.1| Beta-lactamase-like protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 199 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 49/185 (26%) Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH HADH+HG+ L ++ + VY + ++ + + P+ Sbjct: 1 MTHEHADHVHGVGLLS-----RRYNVPVYLSSGTLRGMRK---------------PVEIT 40 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESLE 196 ++ + G ++ + H + F F + TD+ ++ + L+ Sbjct: 41 GLLAGGE-----SLQIGALDIDVVSVAHDALEPTQFVFSDGKRRFGVLTDLGSYCSNVLQ 95 Query: 197 KLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELIN---PKNAI 236 + Q LD L+I+A L G + H + ++ + + ++ + Sbjct: 96 RYQGLDALMIEANHCRDMLARGQYPVFLKQRVGCETGHLNNHQAASLVSELGWQDLQHLV 155 Query: 237 LTHMH 241 L H+ Sbjct: 156 LAHLS 160 >gi|322614206|gb|EFY11140.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621706|gb|EFY18559.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624007|gb|EFY20841.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628901|gb|EFY25683.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633374|gb|EFY30116.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636050|gb|EFY32758.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639598|gb|EFY36285.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644302|gb|EFY40845.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649815|gb|EFY46239.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653526|gb|EFY49855.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657620|gb|EFY53889.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664533|gb|EFY60727.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667353|gb|EFY63517.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671240|gb|EFY67365.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677864|gb|EFY73927.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681038|gb|EFY77071.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686297|gb|EFY82280.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323196125|gb|EFZ81287.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198020|gb|EFZ83141.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323207738|gb|EFZ92684.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209876|gb|EFZ94791.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214807|gb|EFZ99555.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222536|gb|EGA06901.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226416|gb|EGA10624.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230705|gb|EGA14823.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234944|gb|EGA19030.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238983|gb|EGA23033.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244660|gb|EGA28666.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249830|gb|EGA33731.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251048|gb|EGA34923.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257216|gb|EGA40916.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263280|gb|EGA46817.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267531|gb|EGA51015.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271058|gb|EGA54486.1| beta-lactamase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 265 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVL--SIDAVLYTHPHADHIHGI---- 92 SL + +T+++ DTGPD F + + AV+ +H H DH G+ Sbjct: 28 SLLVE-----DESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLP 82 Query: 93 DGLRGYFLKQKRP 105 D R Sbjct: 83 DNSRIICHPDIAR 95 >gi|320538888|ref|ZP_08038564.1| putative hydroxyacylglutathione hydrolase [Serratia symbiotica str. Tucson] gi|320031048|gb|EFW13051.1| putative hydroxyacylglutathione hydrolase [Serratia symbiotica str. Tucson] Length = 251 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLSI-DAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + VI+D G + ++ I DA+L TH H DH+ G+ + ++ + Sbjct: 18 DDQHGHCVIIDPGESAPVLGALYRLKLIPDAILLTHHHQDHVGGVAQVVAHYPN----LP 73 Query: 108 VYAAPDCMK 116 VY + Sbjct: 74 VYGPQETAD 82 >gi|315922178|ref|ZP_07918418.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696053|gb|EFS32888.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 264 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 34/200 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +SL + ++ + VD D+ Y Q D +L TH H DH + Sbjct: 66 ASLLLEYAGQK-----IFVDPVSDYADYTQQ-----PKADFILITHEHGDHF----DTKA 111 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + A P+C K L + + + + + I +E VP + G Sbjct: 112 IAAIETSRTRIIANPNCRKMLNRG-----QEMKNGDVLQLADDIKLEA--VPAYNTTPGR 164 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + P + +G I +LG G Y D P L +++++D + + Sbjct: 165 D-KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LTQVKDIDIAFLPVNQPYT--- 215 Query: 217 HFSLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 216 -MTPEQAIRATQIIKPRILY 234 >gi|284801820|ref|YP_003413685.1| hypothetical protein LM5578_1575 [Listeria monocytogenes 08-5578] gi|284994962|ref|YP_003416730.1| hypothetical protein LM5923_1527 [Listeria monocytogenes 08-5923] gi|284057382|gb|ADB68323.1| hypothetical protein LM5578_1575 [Listeria monocytogenes 08-5578] gi|284060429|gb|ADB71368.1| hypothetical protein LM5923_1527 [Listeria monocytogenes 08-5923] Length = 555 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|268323876|emb|CBH37464.1| conserved hypothetical protein, metallo-beta-lactamase superfamily [uncultured archaeon] Length = 238 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 58/171 (33%), Gaps = 30/171 (17%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID--VYAAPDCMKHLFESFRYCFKAL 129 + D +L TH H DH + + + R D V A C+K L Sbjct: 56 DLEKGDVILITHHHKDH------CKTVTVNRLRNTDTLVIAPKRCIKELGTDIEVIKPGE 109 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---GNVAY-CT 185 + I + DV I A + + H + +G+ G Y Sbjct: 110 E------------ITSGDVKIKAVEAYNTEQGNSTKKVHHKGDCVGYLITLKGKTIYHAG 157 Query: 186 DVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAI 236 D + P +++L ++D AL + + E+++ I PK I Sbjct: 158 DTDFIPE--MKELSDIDV----ALLPIGGTFTMDIQEAVEAAIAIKPKVVI 202 >gi|257055304|ref|YP_003133136.1| DNA internalization-related competence protein ComEC/Rec2 [Saccharomonospora viridis DSM 43017] gi|256585176|gb|ACU96309.1| DNA internalization-related competence protein ComEC/Rec2 [Saccharomonospora viridis DSM 43017] Length = 837 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Query: 43 KISRVSERGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 + ER V+VDTGPD F + R V I V+ TH HADH+ G+ Sbjct: 554 LVLATGERD--RAVVVDTGPDPAAFDRCLDRLGVNRIPLVVLTHLHADHVGGL 604 >gi|320528892|ref|ZP_08029984.1| hypothetical protein HMPREF9555_00038 [Selenomonas artemidis F0399] gi|320138522|gb|EFW30412.1| hypothetical protein HMPREF9555_00038 [Selenomonas artemidis F0399] Length = 575 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D+G F + L E + A++ TH H DHI + Sbjct: 48 RVDDEIIVIDSGLMFPEEDMLGIDLVIPDITYLIENKDMVKAIVLTHGHEDHIGAL---- 103 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y +KQ P+ VY + L Sbjct: 104 PYVMKQ-IPVPVYGTRLTLGILEGR 127 >gi|288923289|ref|ZP_06417426.1| beta-lactamase domain protein [Frankia sp. EUN1f] gi|288345376|gb|EFC79768.1| beta-lactamase domain protein [Frankia sp. EUN1f] Length = 581 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+AV+ TH H DHI + Y L+++R I + + + Sbjct: 85 PDF--TAIRDRLDDIEAVILTHAHEDHIGAV----PYLLRERRDIPLIGTRLTLALMVA- 137 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 K + R P + E + + G + + H Sbjct: 138 -----KLQEHRIQPVTLQIREEERH--------SFGPFDCEFLAVNHS 172 >gi|220904986|ref|YP_002480298.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869285|gb|ACL49620.1| metallo-beta-lactamase family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 382 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 41/129 (31%), Gaps = 17/129 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGPD---FYMQVLREQVL------SIDAVLYTHPHADHIHG 91 S I + GS T + DTG + RE + I A + TH H DH G Sbjct: 136 SCLIEVEALDGSVTKYLFDTGWNYVWMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWG 195 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIV----NPIVIENND 147 + K I VY + + C P + N + + D Sbjct: 196 L----PAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHKLENGVALYTFD 251 Query: 148 VPICMKSAG 156 PI + G Sbjct: 252 CPIIFRVFG 260 >gi|217964418|ref|YP_002350096.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|217333688|gb|ACK39482.1| metallo-beta-lactamase family protein [Listeria monocytogenes HCC23] gi|307571017|emb|CAR84196.1| metallo-beta-lactamase family protein [Listeria monocytogenes L99] Length = 555 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|260809984|ref|XP_002599784.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae] gi|229285066|gb|EEN55796.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae] Length = 319 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 41/182 (22%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 TH HADH G+ + +Y + K L F P +V+ Sbjct: 28 FLTHMHADHTSGLSPSWKH--------PIYCSEITAKLLIHKFDIA---------PALVH 70 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL----GFRFGNVAYCTDVNAFPA--- 192 + + + + ++ + H + + G+ FG++ Y D P Sbjct: 71 TLEVGESRMLPLDETGQETMTVTVFDANHCPGAVMFLFQGY-FGSIFYTGDFRYSPEMFD 129 Query: 193 -ESLEKLQNLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDM 248 E L ++D L +D S +++ + I+ I + ++D+ Sbjct: 130 HEVLANRPSIDVLYLDNTYCSPECKFPSR---AQATQMIKDI---------ISRHPEHDI 177 Query: 249 VL 250 VL Sbjct: 178 VL 179 >gi|206562166|ref|YP_002232929.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] gi|198038206|emb|CAR54159.1| metallo-beta-lactamase superfamily protein [Burkholderia cenocepacia J2315] Length = 467 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V++D G + ++ L ++DAV+ TH H DH ++ Sbjct: 20 EHGGRRVLIDCGLFQGTKNLRLRNWNPLPLAPDTLDAVVLTHAHIDHTG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 + VY + Sbjct: 76 EGYRGPVYCTAATAE 90 >gi|168187500|ref|ZP_02622135.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] gi|169294607|gb|EDS76740.1| metallo-beta-lactamase family protein [Clostridium botulinum C str. Eklund] Length = 199 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 44/153 (28%), Gaps = 27/153 (17%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVL----SIDAVLYTHPHADHIHGIDG 94 + I N I+D G D +L + I +L TH H DH G+ Sbjct: 14 NCYILI------DGNEGCIIDPGGD--ADMLINNIDTFNVHIKFILLTHGHMDHTGGVQE 65 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 L+ + + VY + L F + E+ + Sbjct: 66 LKD-----RYNVPVYINEKDRE-LMRKHSQVFGP---------IWNETKEDKTIKDGDVL 110 Query: 155 AGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 G +E + + F NV + D Sbjct: 111 KLGNLEIKCLETPGHTPGGMSFIVKNVVFTGDT 143 >gi|329936620|ref|ZP_08286327.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045] gi|329303850|gb|EGG47733.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045] Length = 561 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 33/154 (21%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ + L++K I + + + + Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALI---------- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + + P +E + + G + + H +L G V + Sbjct: 116 -EAKLQEHRIRPYTLEVAE---GHRERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHT 171 Query: 185 TDVN--AFPAE-------SLEKL--QNLDFLIID 207 D P + + +L + +D L+ D Sbjct: 172 GDFKMDQLPLDNRLTDLHAFARLSEEGIDLLLAD 205 >gi|313113469|ref|ZP_07799058.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624196|gb|EFQ07562.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 608 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 50 RGSNTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLR 96 + +IVD G F + + I +L TH H DHI I Sbjct: 79 ECNGDMIIVDCGLVFPDSDMYGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGSIP--- 135 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +L QK + +Y + L++ + I K Sbjct: 136 --YLLQKLDLPIYGTRLTCGLIRNK-------LEEFGLAGRTKFVEITPRQ-----KIKL 181 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA 182 G PI H ++ F + A Sbjct: 182 GCFTIEPIHVNHSIPDAVAFAIDSPA 207 >gi|321311964|ref|YP_004204251.1| putative metal-binding hydrolase [Bacillus subtilis BSn5] gi|291484925|dbj|BAI86000.1| hypothetical protein BSNT_03701 [Bacillus subtilis subsp. natto BEST195] gi|320018238|gb|ADV93224.1| putative metal-binding hydrolase [Bacillus subtilis BSn5] Length = 211 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Query: 52 SNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + +I D G + + Q ++E+ L+ A+L TH H DHI +D +R +K I VY Sbjct: 21 DDQCLIFDPGGEGHKINQYIKEKGLTPLAILLTHAHFDHIGALDEVR-----EKWDIPVY 75 Query: 110 AAPD 113 + Sbjct: 76 LHQN 79 >gi|57238892|ref|YP_180028.1| hypothetical protein Erum1610 [Ehrlichia ruminantium str. Welgevonden] gi|58578821|ref|YP_197033.1| hypothetical protein ERWE_CDS_01570 [Ehrlichia ruminantium str. Welgevonden] gi|57160971|emb|CAH57877.1| conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] gi|58417447|emb|CAI26651.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 542 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 18/136 (13%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 VI+D G F +++ + ++ TH H DHI GI + Sbjct: 28 GKWVIIDFGAGFADDNMPGIDMIVADISFIKQNKKDLLGIVLTHAHEDHIGGIQ-----Y 82 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L +YA L + C + P I+ I M + + Sbjct: 83 LWHDLQCPIYATKFTASLLDSKLKECSLNANITQIDPSQKLILGPFTLEFINMTHSIPEM 142 Query: 160 EAIPILQQHGRISSLG 175 AI + + G + G Sbjct: 143 NAIALHTEKGTVIHTG 158 >gi|16803474|ref|NP_464959.1| hypothetical protein lmo1434 [Listeria monocytogenes EGD-e] gi|47095385|ref|ZP_00232995.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|224501625|ref|ZP_03669932.1| hypothetical protein LmonFR_03752 [Listeria monocytogenes FSL R2-561] gi|254827722|ref|ZP_05232409.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|254829807|ref|ZP_05234462.1| hypothetical protein Lmon1_00560 [Listeria monocytogenes 10403S] gi|254898400|ref|ZP_05258324.1| hypothetical protein LmonJ_01255 [Listeria monocytogenes J0161] gi|254912109|ref|ZP_05262121.1| conserved hypothetical protein [Listeria monocytogenes J2818] gi|254936436|ref|ZP_05268133.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|16410863|emb|CAC99512.1| lmo1434 [Listeria monocytogenes EGD-e] gi|47016206|gb|EAL07129.1| metallo-beta-lactamase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258600101|gb|EEW13426.1| metallo-beta-lactamase [Listeria monocytogenes FSL N3-165] gi|258609028|gb|EEW21636.1| metallo-beta-lactamase [Listeria monocytogenes F6900] gi|293590077|gb|EFF98411.1| conserved hypothetical protein [Listeria monocytogenes J2818] Length = 555 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|148259948|ref|YP_001234075.1| beta-lactamase domain-containing protein [Acidiphilium cryptum JF-5] gi|146401629|gb|ABQ30156.1| beta-lactamase domain protein [Acidiphilium cryptum JF-5] Length = 548 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 24/85 (28%), Gaps = 18/85 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F L I ++ TH H DHI GI + Sbjct: 29 DGDLLVVDCGMGFAGPEAPEAELLVPDPAFLAANRDRIAGLVITHAHEDHIGGIARIWDA 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFR 123 VYA P + Sbjct: 89 L-----RCPVYATPFAAALIRYRLG 108 >gi|297527561|ref|YP_003669585.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] gi|297256477|gb|ADI32686.1| beta-lactamase domain protein [Staphylothermus hellenicus DSM 12710] Length = 427 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 48/246 (19%) Query: 51 GSNTTVIVDTGPDF----YMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 N ++D G +F + Q L + + + + TH H DHI +P Sbjct: 22 DDNKKFLLDYGVNFDEEDHPQFPLHVRPIELSGLAITHAHLDHIG----AAPLLYITGKP 77 Query: 106 IDVYAAPDCM--------KHLFESFRYC------FKALDDRTYPPIVNPIVIENNDVPIC 151 V+ + L + Y F+A+ Y + + +EN+ I Sbjct: 78 -RVFVTKPTLDIGKLLISDFLKLNAYYIDYSIEEFEAMASNAYL-LEYGVEVENDGFKII 135 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ----NLDFLIID 207 +AG ++ + I + G R Y DVN +L + + +D LII+ Sbjct: 136 ATNAGHILGSAMIYLETPS----GHRI---LYTGDVNTIQTWTLSRAELWPLKIDTLIIE 188 Query: 208 ALK--NGLHSSHFSLSESLKKIELI-NPKNAILT-----HMHVDLDYDMVLKSTPS-RVV 258 + H+S + IE + N +L ++ +V P V Sbjct: 189 STYGSTKHPPRHYSEKRLVDAIEEVTNAGGTVLIPAFSVGRSQEVMC-LVQAELPHLDVY 247 Query: 259 PAFDGM 264 DGM Sbjct: 248 L--DGM 251 >gi|171742292|ref|ZP_02918099.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC 27678] gi|171277906|gb|EDT45567.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC 27678] Length = 646 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 114 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVEALVLTHGHEDHIGGV----PYLL 167 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + V P +E +V + A Sbjct: 168 KLRPDIPLIGSKLTLAFAEAKCKEHHINPTLVEVKGRDKLKVGPYNLEFVNVTHSIPDAL 227 Query: 157 GVIEAIP 163 V P Sbjct: 228 AVFVQTP 234 >gi|46579289|ref|YP_010097.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448703|gb|AAS95356.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233117|gb|ADP85971.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris RCH1] Length = 554 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 31/149 (20%) Query: 44 ISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSID----------AVLYTHPHADHIH 90 ++ +++TV++D G PD Y + + D ++ TH H DHI Sbjct: 21 LNCQVWSTADSTVLIDCGLMFPDDYHLGVDVVIPRFDHILQQRDKVRGIILTHGHEDHIG 80 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 + + + R I ++ + + L + +E V Sbjct: 81 AL----PWLVPHLRGIPIFGSRFTLA------------LVEHKLREHGLADRVEFVPVTP 124 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRFG 179 A G + + H I G+ G Sbjct: 125 GTPLALGDMTFHFLPVCHSIIE--GYAVG 151 >gi|315146723|gb|EFT90739.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX4244] Length = 709 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSIQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|313895658|ref|ZP_07829214.1| ribonuclease J 1 [Selenomonas sp. oral taxon 137 str. F0430] gi|312975784|gb|EFR41243.1| ribonuclease J 1 [Selenomonas sp. oral taxon 137 str. F0430] Length = 562 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + +++D+G F + L E + A++ TH H DHI + Sbjct: 35 RVDDEIIVIDSGLMFPEEDMLGIDLVIPDITYLIENKDMVKAIVLTHGHEDHIGAL---- 90 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y +KQ P+ VY + L Sbjct: 91 PYVMKQ-IPVPVYGTRLTLGILEGR 114 >gi|302671969|ref|YP_003831929.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] gi|302396442|gb|ADL35347.1| RNA-metabolising metallo-beta-lactamase [Butyrivibrio proteoclasticus B316] Length = 559 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R ++ ++VD G F L+E + + + TH H DHI + Sbjct: 31 RYEDSIIVVDCGLSFPDDDMLGIDLVIPDITYLQENIDKVKGFVITHGHEDHIGAL---- 86 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFES 121 Y L + + VYA M + Sbjct: 87 PYVLHELN-VPVYATRLTMGIIEHK 110 >gi|290894102|ref|ZP_06557075.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|290556357|gb|EFD89898.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] Length = 555 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|296126846|ref|YP_003634098.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] gi|296018662|gb|ADG71899.1| beta-lactamase domain protein [Brachyspira murdochii DSM 12563] Length = 208 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 15/135 (11%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S +S E + G D Y ++L + V+YTH H DHI G D +R F Sbjct: 18 SYIVSCDDEAMIIDMAKLSFGYDDYKKLL--NGKKLVRVIYTHGHFDHISGADDIRKEFP 75 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 + + Y F + + I+ + ++ Sbjct: 76 NVPHCV-------------HNLDYNFFQDPNLNVSAYLGNIITCQSPEEKFNDGDTFKLK 122 Query: 161 AIPILQQHGRISSLG 175 I H + G Sbjct: 123 DIEFKVIHTPGHTEG 137 >gi|86739965|ref|YP_480365.1| ComEC/Rec2-related protein [Frankia sp. CcI3] gi|86566827|gb|ABD10636.1| ComEC/Rec2-related protein [Frankia sp. CcI3] Length = 872 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVL-REQVLSIDAVLYTHPHADHIHGIDGLRG 97 G T V+VD GPD + L V I V+ +H HADH+ G+ + G Sbjct: 612 GPGTAVLVDAGPDPALLTRCLSDLGVRRIPVVILSHFHADHVEGLPAVLG 661 >gi|289705020|ref|ZP_06501433.1| putative DNA internalization-related competence protein ComEC/Rec2 [Micrococcus luteus SK58] gi|289558279|gb|EFD51557.1| putative DNA internalization-related competence protein ComEC/Rec2 [Micrococcus luteus SK58] Length = 855 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 50 RGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGI 92 G V+VD GP+ + +V +DAVL TH HADH G+ Sbjct: 601 SGPRAGVVVDVGPEPGLARRCLDDLEVDRVDAVLLTHLHADHAGGL 646 >gi|146184712|ref|XP_001029967.2| cyclic nucleotide-binding domain containing protein [Tetrahymena thermophila] gi|146143225|gb|EAR82304.2| cyclic nucleotide-binding domain containing protein [Tetrahymena thermophila SB210] Length = 815 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 52/237 (21%) Query: 53 NTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++VD P + + + I A++ TH HADH G + ++ I+V Sbjct: 322 GKGIMVDPPPFSNDYLKKMGINPDKISAIIITHCHADHDAGAFEK----ILLEKKIEV-- 375 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + SF + + I V + MK GG H Sbjct: 376 --ITTRTIMNSFLRKYSNVTGMRREEIRKLFVFRPVVIGSRMKIFGGSFNF--FYSFH-V 430 Query: 171 ISSLGFRFG----NVAYCTDVNAFP-------------AESLEKLQNLDF----LII-DA 208 I +GF ++ + D P E ++L N+DF LI+ +A Sbjct: 431 IPCIGFDIELNKKSLYFSADTFYCPIKLKKYFEWGYLQQERYQQLANIDFDKFDLILHEA 490 Query: 209 LKNGLHSS-----HFSLSESLKKIELINPKN-AILTHM-HVDLDYDMVLKSTPSRVV 258 +H++ H S K L H+ + DL ++ LK S + Sbjct: 491 GVPPIHTAQESFMHLSA----------KAKQNLYLVHIANKDLKKELGLKIAKSGIE 537 >gi|114563984|ref|YP_751498.1| beta-lactamase domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114335277|gb|ABI72659.1| beta-lactamase domain protein [Shewanella frigidimarina NCIMB 400] Length = 521 Score = 44.4 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 10/80 (12%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SS I +G+ T G Q+ + + I A++ TH H DH+ I L Sbjct: 38 SSYLIDCGLFQGAET-----AGKSSADQLQITFDIQHIKALIITHCHIDHVGRIPYLLAA 92 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 Q +YA L Sbjct: 93 GFNQ----PIYATTATAALL 108 >gi|332178653|gb|AEE14342.1| beta-lactamase domain protein [Thermodesulfobium narugense DSM 14796] Length = 278 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 12/77 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S+ I+ SN ++ DTG + +L +D ++ +H H DH G+ + Sbjct: 26 SILINI-----SNKLILFDTGQSGSIIHNLSLLGVNPKDLDMIVLSHGHYDHTGGLLSIL 80 Query: 97 GYFLKQKRPIDVYAAPD 113 G ++ I V+ D Sbjct: 81 G---NARKKIPVFLHKD 94 >gi|322372824|ref|ZP_08047360.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] gi|321277866|gb|EFX54935.1| metallo-beta-lactamase superfamily protein [Streptococcus sp. C150] Length = 553 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q+ V+ + ++ L + F Sbjct: 55 LIENRDRIQGIFLTHGHADAIGALP-----YILQEVKAPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + N VI+ + I + A H S+G GN+ Y Sbjct: 103 VKNAGVKKFNNFHVIDA-ETEIEFEDAVVSF----FKTTHSIPESMGVVIGTDQGNIVYT 157 Query: 185 TDVN 188 D Sbjct: 158 GDFK 161 >gi|330932823|ref|XP_003303925.1| hypothetical protein PTT_16327 [Pyrenophora teres f. teres 0-1] gi|311319770|gb|EFQ87987.1| hypothetical protein PTT_16327 [Pyrenophora teres f. teres 0-1] Length = 1109 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 91/309 (29%), Gaps = 102/309 (33%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T LG G++L P R S+ + ++D G + Sbjct: 660 EITTLGTGSAL----------------PSKYRNVSATLVRVPG----VGNYLLDCGENTL 699 Query: 66 MQVLR--------EQVLSIDAVLYTHPHADHIHGIDGL-RGYFLKQKRPIDVYAAPDCMK 116 Q+ R + + ++ + +H HADH G + + ++ + P + Sbjct: 700 GQLSRVFSHEEFVDVLKNLRMIWISHLHADHHLGTTAVIKAWYQVVHNGVP---NPQTLG 756 Query: 117 H--------------------LFESFRYCFKALDDRTYPPIVNPIVIEN----------- 145 + L Y +++D Y I+ + N Sbjct: 757 NSTDGIDIKSYGLSVISHRGMLQWLNEY--SSVEDFGYSRILPLQLTPNEKGKSSKLSVL 814 Query: 146 -------------NDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN------------ 180 + I++ + HG ++ F F Sbjct: 815 NSFEKLESENPSIHRREFEQLLGFEDIQSAHVAHCHGSMAVS-FTFPRSPSDPQDVKPLK 873 Query: 181 VAYCTDVNAFPAESLEKLQNLD--FLIIDA------LKNGLHSSHFSLSESLKKIELINP 232 V+Y D P+ ++ D LI +A L + H + SE+L E +N Sbjct: 874 VSYSGDCR--PSYHFGRI-GADTTVLIHEATFDDELLGDAKAKKHSTTSEALGVGEKMNA 930 Query: 233 KNAILTHMH 241 K +LTH Sbjct: 931 KAVVLTHFS 939 >gi|257865158|ref|ZP_05644811.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257871482|ref|ZP_05651135.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257874780|ref|ZP_05654433.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] gi|257799092|gb|EEV28144.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC30] gi|257805646|gb|EEV34468.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC10] gi|257808946|gb|EEV37766.1| metallo-beta-lactamase superfamily protein [Enterococcus casseliflavus EC20] Length = 559 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 29/154 (18%) Query: 46 RVSERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGI 92 + + +++D G F + + + + ++ TH H DHI GI Sbjct: 25 CYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSYIVQNLPKVKGLIVTHGHEDHIGGI 84 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENN 146 +L ++ I +YA P + + D + + ++ I Sbjct: 85 P-----YLLREANIPIYAGPLALALITNKLDEHGLLRDAELHEINEDTVIRFRKTSISFF 139 Query: 147 DVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + A GV+ P G I + G F+F Sbjct: 140 RTTHSIPDALGVVVKTP----SGNIVATGDFKFD 169 >gi|23099371|ref|NP_692837.1| hypothetical protein OB1916 [Oceanobacillus iheyensis HTE831] gi|22777600|dbj|BAC13872.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 207 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 20/131 (15%) Query: 56 VIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +IVD G D + +++E L I+A+L TH H DHI ++ +R QK VY Sbjct: 25 IIVDPGGDAELILSIIKEHHLDINAILLTHAHFDHIGALEKIR-----QKTNAPVYLHQA 79 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + L + + + I + G I + H S Sbjct: 80 EHEWLSD---------PNLNGSHKLIGESILATPADFSVDEGGLTIGEFSMQVYHTPGHS 130 Query: 174 LGFRFGNVAYC 184 G +V+Y Sbjct: 131 PG----SVSYI 137 >gi|323526832|ref|YP_004228985.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1001] gi|323383834|gb|ADX55925.1| hydroxyacylglutathione hydrolase [Burkholderia sp. CCGE1001] Length = 263 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 9/75 (12%) Query: 50 RGSNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 + V+VD G L ++ + A+L TH H DH+ G+ L + + + Sbjct: 21 SDGHHAVVVDPGEAAPVRA-CLAKRGWRLSAILLTHHHQDHVGGVADLL-----KGQAVP 74 Query: 108 VYAAP-DCMKHLFES 121 VY + ++H+ + Sbjct: 75 VYGPAGEAIEHVTQR 89 >gi|259502097|ref|ZP_05744999.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] gi|259169910|gb|EEW54405.1| metallo-beta-lactamase superfamily protein [Lactobacillus antri DSM 16041] Length = 268 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 27/175 (15%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G ++ L ++ ++A+ TH H+DH HG+ L ++ + Sbjct: 26 DQHRILIDAGLSGKKIEGLMAKIDRSLADVEAIFVTHEHSDHCHGVG-----VLARRYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + D++ + N + + + E Sbjct: 81 AVYANRGTWQAMANKVG---AIPDEQKFIFNPNSVQTLGDLDIESFAVSHDAAEPQFYQV 137 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H TD +++ D +++ L+ G +S Sbjct: 138 HHDN--------KTFCILTDTGYVSDRVAGTIRDADAYLMECNHDTEMLRMGPYS 184 >gi|257470592|ref|ZP_05634682.1| metallo-beta-lactamase family protein [Fusobacterium ulcerans ATCC 49185] gi|317064798|ref|ZP_07929283.1| metallo-beta-lactamase [Fusobacterium ulcerans ATCC 49185] gi|313690474|gb|EFS27309.1| metallo-beta-lactamase [Fusobacterium ulcerans ATCC 49185] Length = 275 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Query: 41 SLKISRVSERGSNTTVIVDTGP--DFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 SL I + +V+ DTG DF Q L+ + +I V+ +H H DH GI L Sbjct: 24 SLFIE-----DEDISVLFDTGKSGDFTKNAQKLQVPLSNIKHVVLSHSHFDHTGGIRELL 78 Query: 97 GYFLK 101 F Sbjct: 79 DNFNN 83 >gi|237746099|ref|ZP_04576579.1| beta-lactamase domain-containing protein [Oxalobacter formigenes HOxBLS] gi|229377450|gb|EEO27541.1| beta-lactamase domain-containing protein [Oxalobacter formigenes HOxBLS] Length = 275 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 12/77 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLR 96 S+ + + +VDTG F R + + + TH H DH G+ Sbjct: 23 SILVELP----NGRRWLVDTGTTDIFMENARRMGISLDDLAGIAITHGHDDHTGGL---- 74 Query: 97 GYFLKQKRPIDVYAAPD 113 ++ + K VY P Sbjct: 75 TFYSRLKGKPPVYGHPY 91 >gi|228934364|ref|ZP_04097203.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825532|gb|EEM71326.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 285 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 19/142 (13%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V SN V+VD G P +++ R A++ TH H DH+ GI L Sbjct: 41 ICFVGNPESNDFVLVDAGMPKCANEIISVAKDRFGTNSRPKAIILTHGHFDHVGGIIELI 100 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y+ + VYA + L Y D +V + + PI + G Sbjct: 101 KYW-----DVPVYAHQMEIPFLTGQQSY--PEPDPTVEGGMVAKMSPLFPNEPIDL---G 150 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 I+ +P + GFR+ Sbjct: 151 NSIKVLPTDGTVPHMP--GFRW 170 >gi|254519804|ref|ZP_05131860.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226913553|gb|EEH98754.1| beta-lactamase domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 280 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 28/185 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I +N +++D+GP+ L++ + D ++ THPH DHI + Sbjct: 49 SILIQV-----NNKNLLIDSGPNKSEDKLKKYLKKLNISKFDYIIATHPHEDHIGNM--- 100 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 Y + ++ YA P F+ + + + V++ N I + Sbjct: 101 -SYIINNFDVLNFYA-PKVENSTK-----AFETMVESLIRKDLKIKVLKANIKSIDLGKN 153 Query: 156 GGVIEAIPI------LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL 209 V P+ L + I + + + + D + D L D L Sbjct: 154 IVVDVFSPLSNSYEDLNNYSPIVKISYGNTSFLFTGDAEELSENEVLN-AGFD-LKCDVL 211 Query: 210 KNGLH 214 K G H Sbjct: 212 KIGHH 216 >gi|237808606|ref|YP_002893046.1| beta-lactamase domain-containing protein [Tolumonas auensis DSM 9187] gi|237500867|gb|ACQ93460.1| beta-lactamase domain protein [Tolumonas auensis DSM 9187] Length = 388 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 47/211 (22%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E + ID +L TH H DH + L + L Sbjct: 168 EDIPEIDYLLITHDHWDH---------------------LDYPTVMGLKDKIGKIITPLG 206 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG------------- 175 +Y + +I D K I +P GR+ + Sbjct: 207 VGSYFRQWGFDEKLIHEGDWNDVFKDKQTQIHILPARHFSGRLLTRNKTLWGSFALITPN 266 Query: 176 ---FRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS--HFSLSESLKKIELI 230 + G+ Y ++ D I++ + H S E+ + + Sbjct: 267 HRIYLGGDSGYGPHFREI----GKRFGGFDLAILECGQYNPDWRLIHMSPEETAQAAADL 322 Query: 231 NPKNAILTHMH-VDLDYDMVLKSTPSRVVPA 260 + K + +H L + + V A Sbjct: 323 SAKTLLPSHNSKFKLAHHAWNDPL-NHVSKA 352 >gi|196004608|ref|XP_002112171.1| hypothetical protein TRIADDRAFT_37642 [Trichoplax adhaerens] gi|190586070|gb|EDV26138.1| hypothetical protein TRIADDRAFT_37642 [Trichoplax adhaerens] Length = 697 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 21/44 (47%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +E I AV +TH H DH G+ GL P VYA PD Sbjct: 155 QEGDPPIRAVFFTHSHTDHFAGVYGLVPDPNVDTLPFPVYAPPD 198 >gi|13471391|ref|NP_102957.1| hypothetical protein mll1350 [Mesorhizobium loti MAFF303099] gi|14022133|dbj|BAB48743.1| mll1350 [Mesorhizobium loti MAFF303099] Length = 556 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 48/222 (21%) Query: 48 SERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDG 94 + +++D G F + + E + ++ ++ TH H DH + Sbjct: 30 GPPSAREWIVIDVGVTFPDAAHPGVDLILPDTRFIEENLANLRGIIITHAHEDHYGALLD 89 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 K V+ P L P + + + K Sbjct: 90 TWP-----KLKAPVWMTPFSAGLLE-------AKRQGEQGAPKIPLTIYRAGE-----KF 132 Query: 155 AGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL-----------Q 199 G E I H + G V + D P ++ + Sbjct: 133 TVGPFEIEAIPVAHSIPEPMSLAITTPAGTVIHTGDWKIDPEPTIGPKTDEARFRAYGDK 192 Query: 200 NLDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 + LI D AL+ G S ++ E LK + +T Sbjct: 193 GVLALICDSTNALREGESPSEVAVGEGLKGVIQSAVGRVAVT 234 >gi|69246242|ref|ZP_00603855.1| Conserved hypothetical protein MG423 [Enterococcus faecium DO] gi|257879583|ref|ZP_05659236.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257882602|ref|ZP_05662255.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257890251|ref|ZP_05669904.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257893435|ref|ZP_05673088.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|258616806|ref|ZP_05714576.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium DO] gi|260559752|ref|ZP_05831932.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|261207315|ref|ZP_05922002.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289566514|ref|ZP_06446937.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|293559751|ref|ZP_06676272.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|293567613|ref|ZP_06678957.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|294616535|ref|ZP_06696313.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|294623245|ref|ZP_06702116.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|314938911|ref|ZP_07846178.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|314943866|ref|ZP_07850599.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|314948106|ref|ZP_07851507.1| conserved hypothetical protein [Enterococcus faecium TX0082] gi|314951628|ref|ZP_07854673.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|314993866|ref|ZP_07859200.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|314996708|ref|ZP_07861731.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|68195343|gb|EAN09792.1| Conserved hypothetical protein MG423 [Enterococcus faecium DO] gi|257813811|gb|EEV42569.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,230,933] gi|257818260|gb|EEV45588.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,502] gi|257826611|gb|EEV53237.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,410] gi|257829814|gb|EEV56421.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,408] gi|260074420|gb|EEW62742.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium C68] gi|260078375|gb|EEW66079.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium TC 6] gi|289161668|gb|EFD09545.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium D344SRF] gi|291589714|gb|EFF21518.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1071] gi|291590582|gb|EFF22313.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1636] gi|291597352|gb|EFF28532.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium U0317] gi|291606299|gb|EFF35712.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1162] gi|313589146|gb|EFR67991.1| conserved hypothetical protein [Enterococcus faecium TX0133a01] gi|313591676|gb|EFR70521.1| conserved hypothetical protein [Enterococcus faecium TX0133B] gi|313596224|gb|EFR75069.1| conserved hypothetical protein [Enterococcus faecium TX0133A] gi|313597484|gb|EFR76329.1| conserved hypothetical protein [Enterococcus faecium TX0133C] gi|313641785|gb|EFS06365.1| conserved hypothetical protein [Enterococcus faecium TX0133a04] gi|313645442|gb|EFS10022.1| conserved hypothetical protein [Enterococcus faecium TX0082] Length = 559 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKVKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QANIPIYAGPLALALITNK-------LDEHGL-----LRDAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|313608791|gb|EFR84598.1| ribonuclease J 2 [Listeria monocytogenes FSL F2-208] Length = 555 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|305662491|ref|YP_003858779.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM 17230] gi|304377060|gb|ADM26899.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM 17230] Length = 641 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 19/88 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RS++ + R V++D G + + +L + IDAV+ TH H DH Sbjct: 193 RSAILVETAESR-----VLLDFGLNPGRSLSPNAFPRIDLLNIEPDDIDAVIVTHAHLDH 247 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 L Y K VY Sbjct: 248 CG----LVPYLFKYGFRGAVYTTDATRD 271 >gi|300814224|ref|ZP_07094500.1| metallo-beta-lactamase domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511648|gb|EFK38872.1| metallo-beta-lactamase domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 261 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 50/220 (22%) Query: 53 NTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT +++D G + + +IDA+L TH H DH+ L ++ I Sbjct: 21 NTRILIDAGLSGKKIENNLKSRGIDPSTIDAILVTHEHRDHV-----TSVGVLSRRYNIK 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIPILQ 166 V++ + + + P+V I EN ++ Sbjct: 76 VFSNIETAQAMT----------------PVVKKINSENIYIFENNRAFNFKDLKIKAFDT 119 Query: 167 QHGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQN-----------LDFLIID----A 208 H GF ++ TD + + E ++ +D LI A Sbjct: 120 FHDCQKGCGFVIMGNKKISLLTDTGWVNSNAFESMKGSSLYYLESNHDVDMLINGRYTWA 179 Query: 209 LKNGLHSS--HFSLSESLKKIELINPKN---AILTHMHVD 243 K + S+ H S + +E + KN +L H+ + Sbjct: 180 SKKRIMSTKGHLSNENCAEVLEKLLSKNQEIVVLGHLSNE 219 >gi|296331518|ref|ZP_06873989.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674179|ref|YP_003865851.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii str. W23] gi|296151331|gb|EFG92209.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412423|gb|ADM37542.1| ribonuclease J1 [Bacillus subtilis subsp. spizizenii str. W23] Length = 555 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ +I +D+ K+A Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLNIIGEDDIVKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|282882275|ref|ZP_06290907.1| metallo-beta-lactamase superfamily hydrolase [Peptoniphilus lacrimalis 315-B] gi|281297869|gb|EFA90333.1| metallo-beta-lactamase superfamily hydrolase [Peptoniphilus lacrimalis 315-B] Length = 261 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 73/220 (33%), Gaps = 50/220 (22%) Query: 53 NTTVIVDTG---PDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 NT +++D G + + +IDA+L TH H DH+ L ++ I Sbjct: 21 NTRILIDAGLSGKKIENNLKSRGIDPSTIDAILVTHEHRDHV-----TSVGVLSRRYNIK 75 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENN-DVPICMKSAGGVIEAIPILQ 166 V++ + + + P+V I EN ++ Sbjct: 76 VFSNIETAQAMT----------------PVVKKINSENIYIFENNRAFNFKDLKIKAFDT 119 Query: 167 QHGRISSLGFRF---GNVAYCTDVNAFPAESLEKLQN-----------LDFLIID----A 208 H GF ++ TD + + E ++ +D LI A Sbjct: 120 FHDCQKGCGFVIIGNKKISLLTDTGWVNSNAFESMKGSSLYYLESNHDVDMLINGRYTWA 179 Query: 209 LKNGLHSS--HFSLSESLKKIELINPKN---AILTHMHVD 243 K + S+ H S + +E + KN +L H+ + Sbjct: 180 SKKRIMSTKGHLSNENCAEVLEKLLSKNQEIVVLGHLSNE 219 >gi|226328885|ref|ZP_03804403.1| hypothetical protein PROPEN_02786 [Proteus penneri ATCC 35198] gi|225202071|gb|EEG84425.1| hypothetical protein PROPEN_02786 [Proteus penneri ATCC 35198] Length = 87 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 20/88 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 LG A GVP + R +S+ + + + + D G Sbjct: 1 MELIFLGTNA--GVP----------SKD----RNVTSMVLDL--QNKQKSMWMFDCGEAT 42 Query: 65 YMQVL--REQVLSIDAVLYTHPHADHIH 90 Q+L R ++ ++ + TH H DHI Sbjct: 43 QHQILHTRVKLPRLNKIFITHLHGDHIL 70 >gi|50842215|ref|YP_055442.1| putative Zn-dependent hydrolase [Propionibacterium acnes KPA171202] gi|282854291|ref|ZP_06263628.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|50839817|gb|AAT82484.1| putative Zn-dependent hydrolase [Propionibacterium acnes KPA171202] gi|282583744|gb|EFB89124.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|314923280|gb|EFS87111.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1] gi|314966422|gb|EFT10521.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2] gi|314981003|gb|EFT25097.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3] gi|315091662|gb|EFT63638.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4] gi|315093032|gb|EFT65008.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1] gi|315103194|gb|EFT75170.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2] gi|315107045|gb|EFT79021.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1] gi|327327866|gb|EGE69642.1| putative Zn-dependent hydrolase [Propionibacterium acnes HL103PA1] Length = 215 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 43/206 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + + +R ++VD G + +DA+L TH H DH+ Sbjct: 9 SCILVEAAGQR-----ILVDPGNLSRSW---RGLTDLDAILVTHRHPDHV---------- 50 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 P+ + L ++ ++ I ++ + V G + Sbjct: 51 -----------DPEHIGALVDANSGAVVRAEEGACHEIP---ALDADPVAPGDVLQIGEV 96 Query: 160 EAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALKNGL 213 + +H I GNV Y + P + L++ + +D L A Sbjct: 97 RIEAVGGRHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA----- 151 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H+ ++ E++ + ++ L H Sbjct: 152 HAPWAAMKETVDFARSVGARHGFLIH 177 >gi|4514331|dbj|BAA75374.1| ComEC [Bacillus halodurans] Length = 266 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 50 RGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R N TV+VDTG + + ++Q+ ID ++ THPHADHI D + + Sbjct: 36 RSENYTVLVDTGRHDSDAIFTHLEKQQIDQIDLLILTHPHADHIGNADEIVRLY 89 >gi|321260490|ref|XP_003194965.1| 3' tRNA processing endoribonuclease [Cryptococcus gattii WM276] gi|317461437|gb|ADV23178.1| 3' tRNA processing endoribonuclease, putative [Cryptococcus gattii WM276] Length = 1035 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 27/115 (23%) Query: 2 KDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG 61 D T LG G+++ P R SS ++ S G +++D G Sbjct: 533 SDDIVVTTLGTGSAI----------------PSKYRNVSSTHLAIPSLGG----ILLDAG 572 Query: 62 PDFYMQV-------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 Q+ L+ + + V +H HADH G++ + + +Y Sbjct: 573 EGTLGQLRRRFGDGLKSVLEEMKMVFVSHMHADHHLGVNAVLEERFRLGITTPLY 627 >gi|294101352|ref|YP_003553210.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] gi|293616332|gb|ADE56486.1| beta-lactamase domain protein [Aminobacterium colombiense DSM 12261] Length = 321 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 49 ERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 ++ N T+++D GP Y + SID VL TH H DH G+ Sbjct: 47 DQTRNRTLLIDPGPASTLPRLYGALEELGTPSIDYVLLTHVHMDHAGGMGDFMD 100 >gi|291297349|ref|YP_003508747.1| beta-lactamase domain-containing protein [Meiothermus ruber DSM 1279] gi|290472308|gb|ADD29727.1| beta-lactamase domain protein [Meiothermus ruber DSM 1279] Length = 304 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 17/143 (11%) Query: 50 RGSNTTVIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGID-GLRGYFLKQ 102 +++DTG Q+L + I+ V TH H DHI G+ + F Sbjct: 102 DTGRAKILIDTGRGQAGQLLNNLANAGLRPADINIVFITHGHGDHIGGLVRDGQPVFANA 161 Query: 103 KRPI-----DVYAAPDC----MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 + I + + + L + F + V+ + + + Sbjct: 162 QHVIGETELQFWLSQATPPANLVALRDRFTRVRPGAEIAPGVTAVDTPGHTVGHLAVQVT 221 Query: 154 SAGGVIEAIPILQQHGRISSLGF 176 S G + + H I SL F Sbjct: 222 SGGRTLWHLGDAGGH-YILSLRF 243 >gi|302554547|ref|ZP_07306889.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces viridochromogenes DSM 40736] gi|302472165|gb|EFL35258.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces viridochromogenes DSM 40736] Length = 561 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 44/114 (38%), Gaps = 20/114 (17%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+ ++ TH H DHI G+ + L++K I + + + + Sbjct: 65 PDFSS--IRDRLDDIEGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALI--- 115 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + P +E + + G + + H +L Sbjct: 116 --------EAKLQEHRIRPYTLEVAE---GHRERIGPFDCEFVAVNHSIPDALA 158 >gi|254821862|ref|ZP_05226863.1| hypothetical protein MintA_18152 [Mycobacterium intracellulare ATCC 13950] Length = 237 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 15/93 (16%) Query: 36 RRTRSSL-KISRVSERGSNTTVIVDTGPDFYMQV-LREQVLSI-----DAVLYTHPHADH 88 R R S ++ RG T++VD+G + V + ++ TH H DH Sbjct: 13 HRCRLSFCDVTIGLVRGRTGTLLVDSGTTLAEAAAIDADVRRLAGRPVSHIVLTHKHFDH 72 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 + G +F + K +Y AP+ + HL + Sbjct: 73 VLG----SSFFGRAK----IYCAPEVVGHLRSA 97 >gi|256003104|ref|ZP_05428096.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281419226|ref|ZP_06250242.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|255992795|gb|EEU02885.1| beta-lactamase domain protein [Clostridium thermocellum DSM 2360] gi|281407092|gb|EFB37354.1| beta-lactamase domain protein [Clostridium thermocellum JW20] gi|316939398|gb|ADU73432.1| hypothetical protein Clo1313_0341 [Clostridium thermocellum DSM 1313] Length = 443 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 10/60 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-FYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS+ ++VD G + QV+ + ++ V+ TH H DHI G+D + Sbjct: 122 SILISQ-----GQYHMLVDAGNNADAEQVVNYLKNKGIRKLEYVIGTHGHEDHIGGLDEV 176 >gi|125975234|ref|YP_001039144.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] gi|125715459|gb|ABN53951.1| beta-lactamase-like protein [Clostridium thermocellum ATCC 27405] Length = 443 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 10/60 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPD-FYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ IS+ ++VD G + QV+ + ++ V+ TH H DHI G+D + Sbjct: 122 SILISQ-----GQYHMLVDAGNNADAEQVVNYLKNKGIRKLEYVIGTHGHEDHIGGLDEV 176 >gi|294618376|ref|ZP_06697954.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] gi|291595353|gb|EFF26668.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E1679] Length = 559 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKVKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QANIPIYAGPLALALITNK-------LDEHGL-----LRDAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|218258138|ref|ZP_03474540.1| hypothetical protein PRABACTJOHN_00194 [Parabacteroides johnsonii DSM 18315] gi|218225731|gb|EEC98381.1| hypothetical protein PRABACTJOHN_00194 [Parabacteroides johnsonii DSM 18315] Length = 304 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 33/179 (18%) Query: 4 YYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD 63 ++ ILGCG++L P R +S + + ++D G Sbjct: 3 EFNINILGCGSAL----------------PTTRHLATSQVVDL-----RDKLYMIDCGEG 41 Query: 64 FYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLF 119 +Q+ +R + + +H H DH G+ GL L + + V+ + +L Sbjct: 42 TQVQMRRMRLHFGRLAHIFISHLHGDHCFGLPGLISTLGMLGRTGELVVHGPKEVETYLR 101 Query: 120 ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + + V ++ + M+ + +IP+ RI + G+ F Sbjct: 102 PIMDLFCRGMGFE-----VRFNPVDTCSHSLVMEDRSLSVYSIPLKH---RIPTCGYLF 152 >gi|147677033|ref|YP_001211248.1| beta-lactamase fold exonuclease [Pelotomaculum thermopropionicum SI] gi|146273130|dbj|BAF58879.1| predicted exonuclease of the beta-lactamase fold [Pelotomaculum thermopropionicum SI] Length = 436 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 51/187 (27%), Gaps = 40/187 (21%) Query: 21 ITGDWGACDPTNPK-------------NRRTRSSLKISRVSERGSNTTVIVDTGPDFY-M 66 I G + + + R SS R N+ ++ PD + Sbjct: 12 IGGSCVELQSGDSRIIIDLGLPLAAKDDSRFDSSTLRLRTGAELVNSGIL----PDIRGL 67 Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 + IDA+ +H H DH G + VY+ + + + F Sbjct: 68 YAWDTECRRIDALFLSHAHIDHY-------GLVNFISPDVPVYSGEATRRLMELT--TMF 118 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 L P N VP+ G P L H + F +V Sbjct: 119 WPLGRVGGKPSTF-----ANGVPVYT----GEFRVTPFLVDHSAFDAYAFLIEAEGKSVF 169 Query: 183 YCTDVNA 189 Y D Sbjct: 170 YSGDFRE 176 >gi|318061229|ref|ZP_07979950.1| ribonuclease Z [Streptomyces sp. SA3_actG] gi|318076101|ref|ZP_07983433.1| ribonuclease Z [Streptomyces sp. SA3_actF] Length = 256 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 61/219 (27%), Gaps = 63/219 (28%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA-PDCMKHLFESFRYCFKALDDRTY 134 + V TH H DH G+ G+ + P VYA P + F RY +Y Sbjct: 11 LHRVCVTHFHGDHSLGLAGVIQRINLDRVPHPVYAHYPASGEEYFRRLRYA------TSY 64 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF---------------- 178 V + ++ + + + G +E + + S G+R Sbjct: 65 YESVGITPVPVHEEGVLVTTPGYTLETRRLSHP---VESFGYRLTEPDGVRMLPEALAAH 121 Query: 179 ------------------------------GNVAYCTDVNAFPAESLEKLQNLDFLIIDA 208 A+ D + E + D L+I++ Sbjct: 122 GIEGPDVGRLRRAGELRGVRLEEVSEVRRGQRFAFVMDT-RMCRGAEELAEGCDLLVIES 180 Query: 209 L------KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 H + ++ ++ +LTH Sbjct: 181 TFADEAAALAEEHGHLTAGQAAALARDAGVRHLVLTHFS 219 >gi|317051045|ref|YP_004112161.1| beta-lactamase domain-containing protein [Desulfurispirillum indicum S5] gi|316946129|gb|ADU65605.1| beta-lactamase domain-containing protein [Desulfurispirillum indicum S5] Length = 257 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 15/144 (10%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGID---GLRGYFLKQK--RPID 107 N T+ +D G + E+ I+ ++ TH H DHI G+ +P Sbjct: 24 NQTIALDAGA-LTDSLPLERQKKIEHIILTHCHFDHIKGLPFFADGLAMTYGSHSSKPAR 82 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 V++ + + L D PP + + + I Sbjct: 83 VHSPANVIDDLRRHIFNNVIWPDFTAIPPKNPVLAYHEAPETFSIDTC----RFRFIPVT 138 Query: 168 HGRISSLGFRFG----NVAYCTDV 187 HG + + +V Y TD Sbjct: 139 HG-VPTYAIHICCENRHVLYVTDT 161 >gi|260173913|ref|ZP_05760325.1| putative metal-dependent hydrolase [Bacteroides sp. D2] Length = 255 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 34/200 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +SL + ++ + VD D+ Y Q D +L TH H DH + Sbjct: 57 ASLLLEYAGQK-----IFVDPVSDYADYTQQ-----PKADFILITHEHGDHF----DTKA 102 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + A P+C K L + + + + + I +E VP + G Sbjct: 103 IAAIETSRTRIIANPNCRKMLNRG-----QEMKNGDVLQLADDIKLEA--VPAYNTTPGR 155 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + P + +G I +LG G Y D P L +++++D + + Sbjct: 156 D-KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LTQVKDIDIAFLPVNQPYT--- 206 Query: 217 HFSLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 207 -MTPEQAIRATQIIKPRILY 225 >gi|169627798|ref|YP_001701447.1| hypothetical protein MAB_0696c [Mycobacterium abscessus ATCC 19977] gi|169239765|emb|CAM60793.1| Conserved hypothetical protein (beta-lactamase?) [Mycobacterium abscessus] Length = 216 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 66/207 (31%), Gaps = 42/207 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 S ++ NTT++ D G +F E + + A+L TH H DH+ + L Sbjct: 9 SCLLAEFPSENGNTTLLFDPG-NFSHGF--EGITGLSAILITHQHPDHVD-LQRLPALVE 64 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV-PICMKSAGGVI 159 +YA P L P +N V + ++ GG Sbjct: 65 ANPGA-ALYADPMTAAQL---------------GGPWQAVHAGDNFTVADLTVRGVGGQ- 107 Query: 160 EAIPILQQHGRISSLGFRFGNVAYC-TDVNAFP------AESLEKLQNLDFLIIDALKNG 212 H I N +Y D +++D L + A Sbjct: 108 ----HAVIHPEIP----LIDNTSYLIGDAEHAARLMHPGDALFAPGEDVDVLALPAAAPW 159 Query: 213 LHSSHFSLSESLKKIELINPKNAILTH 239 +SE+++ + +NP A+ H Sbjct: 160 -----MKVSEAIEYLRAVNPARAVPIH 181 >gi|15897661|ref|NP_342266.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] gi|6015715|emb|CAB57542.1| mRNA 3'-end polyadenylation factor [Sulfolobus solfataricus P2] gi|13813930|gb|AAK41056.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus P2] Length = 639 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-----------LSIDAVLYTHPHAD 87 RS++ + + V++D G + + E++ +DAV+ TH H D Sbjct: 196 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPKLDIDQLKMEELDAVVITHAHLD 250 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 251 HCG----MVPFLFKYGYEGPVYTTVPTRD 275 >gi|329667537|gb|AEB93485.1| hypothetical protein LJP_1163 [Lactobacillus johnsonii DPC 6026] Length = 537 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 17/77 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I A++ TH H DHI GI Y LK+ Sbjct: 11 IIMDCGIKFPEDDMMGINYVISDYSYLVKNRKKIKALVVTHGHEDHIGGI----PYLLKK 66 Query: 103 KRPIDVYAAPDCMKHLF 119 I VYA P + + Sbjct: 67 IPEIPVYATPFALALIR 83 >gi|326403098|ref|YP_004283179.1| ribonuclease J 1 [Acidiphilium multivorum AIU301] gi|325049959|dbj|BAJ80297.1| ribonuclease J 1 [Acidiphilium multivorum AIU301] Length = 548 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 24/85 (28%), Gaps = 18/85 (21%) Query: 52 SNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 ++VD G F L I ++ TH H DHI GI + Sbjct: 29 DGDLLVVDCGMGFAGPEAPEAELLVPDPAFLAANRDRIAGLVITHAHEDHIGGIARIWDA 88 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFR 123 VYA P + Sbjct: 89 L-----RCPVYATPFAAALIRYRLG 108 >gi|257885025|ref|ZP_05664678.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] gi|257820877|gb|EEV48011.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,231,501] Length = 559 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKVKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QANIPIYAGPLALALITNK-------LDEHGL-----LRDAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|257066434|ref|YP_003152690.1| beta-lactamase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256798314|gb|ACV28969.1| beta-lactamase domain protein [Anaerococcus prevotii DSM 20548] Length = 560 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 52 SNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F ++L E + + TH H DHI I Y Sbjct: 28 GNDMIMIDCGLTFPDAEMLGVDIVIPDFTYVEENKNKLRGIFVTHGHEDHIGAI----PY 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFR 123 FLK +VY + L F+ Sbjct: 84 FLKN-IDTNVYCSKLTKGLLENKFK 107 >gi|225575439|ref|ZP_03784049.1| hypothetical protein RUMHYD_03529 [Blautia hydrogenotrophica DSM 10507] gi|225037384|gb|EEG47630.1| hypothetical protein RUMHYD_03529 [Blautia hydrogenotrophica DSM 10507] Length = 272 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 83/269 (30%), Gaps = 63/269 (23%) Query: 1 MKDYY--HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIV 58 MK Y T+LG G +L C N K+R ++V Sbjct: 1 MKGGYLMRLTMLGTGNAL---VTECY-NTCFVLNEKDR------------------YLLV 38 Query: 59 DTGPD--FYMQVLREQVLSID--AVLYTHPHADHIHGID-GLRGYFLKQK-----RPIDV 108 D G Q+ + D + TH H DH+ GI +R K + Sbjct: 39 DGGGGSALLGQLKHSGIDWKDIKEIFVTHKHIDHLTGIVWMIRMICQHMKQGQYEGEATI 98 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH 168 YA + + L++ + ++ + + + + + + Q Sbjct: 99 YAHEEVTRILYDISHMLLGKKETSFIGERLHLVTVSDGE-----ERTIMGRRMVFFDIQS 153 Query: 169 GRISSLGFRFGNVAYCTD------VNAFP--AESLEKLQNLDFLIIDAL----------K 210 + GF Y D P + ++N +L+ +A Sbjct: 154 TKAKQYGFTM----YLEDGEKLTCCGDEPYNDYERQYVENSKWLMHEAFCLYSQADIFHP 209 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH 239 H H ++ E+ + E + KN +L H Sbjct: 210 YEKH--HSTVREACQLAEQLGVKNLLLYH 236 >gi|15616523|ref|NP_244829.1| hypothetical protein BH3961 [Bacillus halodurans C-125] gi|10176586|dbj|BAB07680.1| BH3961 [Bacillus halodurans C-125] Length = 295 Score = 44.4 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 50 RGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R N TV+VDTG + + ++Q+ ID ++ THPHADHI D + + Sbjct: 65 RSENYTVLVDTGRHDSDAIFTHLEKQQIDQIDLLILTHPHADHIGNADEIVRLY 118 >gi|325479455|gb|EGC82551.1| hypothetical protein HMPREF9290_1338 [Anaerococcus prevotii ACS-065-V-Col13] Length = 560 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 18/85 (21%) Query: 52 SNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F ++L E + + TH H DHI I Y Sbjct: 28 GNDMIMIDCGLTFPDAEMLGVDIVIPDFTYVEENKKKLKGIFVTHGHEDHIGAI----PY 83 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFR 123 FLK +VY + L F+ Sbjct: 84 FLKN-IDTNVYCSKLTKGLLENKFK 107 >gi|306822237|ref|ZP_07455619.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679] gi|309802284|ref|ZP_07696392.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022] gi|304554619|gb|EFM42524.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679] gi|308221167|gb|EFO77471.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022] Length = 646 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 25/127 (19%) Query: 56 VIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 +++D G PDF +++++ ++A++ TH H DHI G+ Y L Sbjct: 114 LLIDCGVLFPEEEQPGVDLILPDF--HYIKDRLDKVEALVLTHGHEDHIGGV----PYLL 167 Query: 101 KQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP----IVNPIVIENNDVPICMKSAG 156 K + I + + + + V P +E +V + A Sbjct: 168 KLRPDIPLIGSKLTLAFAEAKCKEHHINPTLVEVKGRDKLKVGPYNLEFVNVTHSIPDAL 227 Query: 157 GVIEAIP 163 V P Sbjct: 228 AVFVQTP 234 >gi|284174985|ref|ZP_06388954.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus 98/2] Length = 638 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-----------LSIDAVLYTHPHAD 87 RS++ + + V++D G + + E++ +DAV+ TH H D Sbjct: 195 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPKLDIDQLKMEELDAVVITHAHLD 249 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 250 HCG----MVPFLFKYGYEGPVYTTVPTRD 274 >gi|261602429|gb|ACX92032.1| KH-domain/beta-lactamase-domain protein [Sulfolobus solfataricus 98/2] Length = 635 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV-----------LSIDAVLYTHPHAD 87 RS++ + + V++D G + + E++ +DAV+ TH H D Sbjct: 192 RSAVLVETPESK-----VLLDVGLNPSANMFGEKLFPKLDIDQLKMEELDAVVITHAHLD 246 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H + + K VY Sbjct: 247 HCG----MVPFLFKYGYEGPVYTTVPTRD 271 >gi|326779417|ref|ZP_08238682.1| ComEC/Rec2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326659750|gb|EGE44596.1| ComEC/Rec2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 805 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ Sbjct: 611 GEGTGVVVDAGPDPRAVDRCLRDLAVTRVPLVVLTHFHADHVRGL 655 >gi|295696186|ref|YP_003589424.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] gi|295411788|gb|ADG06280.1| RNA-metabolising metallo-beta-lactamase [Bacillus tusciae DSM 2912] Length = 555 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N V+VD G F + L E + ++ TH H DHI G+ Y Sbjct: 29 GNDIVVVDAGLKFPEEDMLGIDVVIPDVTYLVENKNRVRGIVLTHGHEDHIGGL----PY 84 Query: 99 FLKQKRPIDVYAAPDCM 115 LK + VY + Sbjct: 85 VLKHIN-VPVYGTRLTL 100 >gi|291458554|ref|ZP_06597944.1| metallo-beta-lactamase family protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419087|gb|EFE92806.1| metallo-beta-lactamase family protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 615 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +IVD G F L+ ++ I + TH H DHI + Y L Q Sbjct: 91 IIVDCGLSFPSDDMLGIDLVIPDISYLKSKMEKIKGFVITHGHEDHIGAL----PYVL-Q 145 Query: 103 KRPIDVYAAPDCMKHLFES 121 + + VYA + + Sbjct: 146 QINVPVYATKLTLALIERK 164 >gi|255026998|ref|ZP_05298984.1| hypothetical protein LmonocytFSL_12888 [Listeria monocytogenes FSL J2-003] Length = 516 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|322421346|ref|YP_004200569.1| beta-lactamase domain-containing protein [Geobacter sp. M18] gi|320127733|gb|ADW15293.1| beta-lactamase domain protein [Geobacter sp. M18] Length = 341 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 16/76 (21%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM---------QVLRE---QVLSIDA 78 +PKN S + + V++DTG + Q L+ + +D Sbjct: 98 NDPKN----VSATVQGFLVNTGSKLVLIDTGAGGHWGGPTLGKLVQNLKASGYKPEQVDL 153 Query: 79 VLYTHPHADHIHGIDG 94 VL TH HADH GI Sbjct: 154 VLLTHLHADHAGGIYE 169 >gi|291483995|dbj|BAI85070.1| hypothetical protein BSNT_02419 [Bacillus subtilis subsp. natto BEST195] Length = 555 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ +I +D+ K+A Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLNIIGEDDIVKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|288930994|ref|YP_003435054.1| hypothetical protein Ferp_0607 [Ferroglobus placidus DSM 10642] gi|288893242|gb|ADC64779.1| conserved hypothetical protein [Ferroglobus placidus DSM 10642] Length = 297 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGY 98 IS + N ++VD GP + +L E V ++ VL TH H DH G+ Sbjct: 24 ISSWVLQEGNKALLVDVGPASTIPLLEESLKKLGVEKVEYVLITHIHIDHAGGLGDFLAI 83 >gi|261820456|ref|YP_003258562.1| hydroxyacylglutathione hydrolase [Pectobacterium wasabiae WPP163] gi|261604469|gb|ACX86955.1| hydroxyacylglutathione hydrolase [Pectobacterium wasabiae WPP163] Length = 251 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 52 SNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 N VIVD G + L + L +A+L TH H DH+ G+ L LK + V+ Sbjct: 21 ENRCVIVDPGEATPVLNTLDQHSLFPEAILLTHHHNDHVGGVSEL----LKHYPNLPVFG 76 Query: 111 APDCMK 116 + K Sbjct: 77 PKETAK 82 >gi|171320781|ref|ZP_02909789.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] gi|171093973|gb|EDT39086.1| beta-lactamase domain protein [Burkholderia ambifaria MEX-5] Length = 467 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + V+VD G + + Q L ++DA++ TH H DH ++ Sbjct: 20 EHGSRRVLVDCGLFQGTKNLRLRNWQPLPLAPDTLDAIVLTHAHLDHSG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 + VY + Sbjct: 76 EGYRGPVYCTAATAE 90 >gi|126650864|ref|ZP_01723080.1| Metal-dependent hydrolase [Bacillus sp. B14905] gi|126592529|gb|EAZ86547.1| Metal-dependent hydrolase [Bacillus sp. B14905] Length = 226 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 15/137 (10%) Query: 51 GSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + V++DTG M+ LRE + + AV+ TH DHI + L Sbjct: 33 DQDMAVLIDTGFPGQMEELREAMAQVGVSLDQLSAVILTHQDVDHIGCLPELIQTC---G 89 Query: 104 RPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC-----MKSAGGV 158 + I VYA ++ A + V+ + + ++P C + + G Sbjct: 90 QHIRVYAHALEQPYIQGELPLLKDAHLENPPKGRVDVTLSDGEELPFCGGIQIIHTPGHT 149 Query: 159 IEAIPILQQHGRISSLG 175 + + +I G Sbjct: 150 PGHLSLYLTQSKILIAG 166 >gi|78780129|ref|YP_398241.1| hypothetical protein PMT9312_1744 [Prochlorococcus marinus str. MIT 9312] gi|78713628|gb|ABB50805.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9312] Length = 660 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 69 LREQVLSIDAVLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFK 127 LRE I ++ TH H DHI GI L+ + + PI +Y M L Sbjct: 77 LRENQRRIKGMIVTHGHEDHIGGISHHLKHFNI----PI-IYGPRLAMSMLRGKMEEA-- 129 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA-----IPILQQHGRISSLG-FRFGNV 181 + DRT VNP + ++ + + G I G F+F ++ Sbjct: 130 GVSDRTTIQTVNPRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIFTGDFKFDHM 189 >gi|16078517|ref|NP_389336.1| ribonuclease J1 [Bacillus subtilis subsp. subtilis str. 168] gi|221309322|ref|ZP_03591169.1| hypothetical protein Bsubs1_08056 [Bacillus subtilis subsp. subtilis str. 168] gi|221313649|ref|ZP_03595454.1| hypothetical protein BsubsN3_07992 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318571|ref|ZP_03599865.1| hypothetical protein BsubsJ_07926 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322845|ref|ZP_03604139.1| hypothetical protein BsubsS_08037 [Bacillus subtilis subsp. subtilis str. SMY] gi|321315211|ref|YP_004207498.1| ribonuclease J1 [Bacillus subtilis BSn5] gi|2833392|sp|Q45493|RNJ1_BACSU RecName: Full=Ribonuclease J 1; Short=RNase J1 gi|2633824|emb|CAB13326.1| ribonuclease J1 [Bacillus subtilis subsp. subtilis str. 168] gi|3282138|gb|AAC24928.1| unknown [Bacillus subtilis] gi|320021485|gb|ADV96471.1| ribonuclease J1 [Bacillus subtilis BSn5] Length = 555 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ +I +D+ K+A Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLNIIGEDDIVKFRKTA-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|313607510|gb|EFR83828.1| metallo-beta-lactamase family protein [Listeria monocytogenes FSL F2-208] Length = 215 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 37/113 (32%), Gaps = 19/113 (16%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R I VY +P + L + I Sbjct: 60 AVLLTHCHYDHIGALEEIRT-TYN----IPVYVSPLEQEWL--------SNPELNLSAHI 106 Query: 138 VNPIVI----ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +I EN G + +P I S+ F F + D Sbjct: 107 AGKAIIAKPAENEFTLGEYNIEGFQFKVVPTPGH--SIGSVSFIFDDFVVVGD 157 >gi|307287381|ref|ZP_07567440.1| hypothetical protein HMPREF9505_00858 [Enterococcus faecalis TX0109] gi|306501554|gb|EFM70850.1| hypothetical protein HMPREF9505_00858 [Enterococcus faecalis TX0109] Length = 561 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI G+ +L + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNLHKVKALVITHGHEDHIGGVP-----YLLR 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + + + + ++ I + A Sbjct: 90 QANIPIYAGPLALALITNKLDEHGLLREAELHEINEDTVIRFRKTAISFFRTTHSIPDAL 149 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 GV+ P G I + G F+F Sbjct: 150 GVVVKTP----SGNIVATGDFKFD 169 >gi|21483316|gb|AAM52633.1| GH20064p [Drosophila melanogaster] Length = 324 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 27/182 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++DTG + Q VL+++ SID +L TH H DH+ G+ + G Sbjct: 70 GSRRILIDTGDEDVPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGVKSIVG------- 122 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN--NDVPICMKSAGGVIEAI 162 + F++ + P I I + ++ + A + Sbjct: 123 -------TKLAEKDCRVFKF-GRTDAPDVCPEIPTDIKLHPLAHNQEFTTEGANVRVVHT 174 Query: 163 PILQQHGRISSL--GFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSL 220 P + ++ G F + A + E +++L+ I+D + H ++ Sbjct: 175 PGHTTDHVVLAMNEGTLFSGDCILGEGTAVFEDLFEYMKSLEK-ILDIKPQRIFPGHGNV 233 Query: 221 SE 222 E Sbjct: 234 IE 235 >gi|58038569|ref|YP_190533.1| metal-dependent hydrolase [Gluconobacter oxydans 621H] gi|58000983|gb|AAW59877.1| Metal-dependent hydrolase [Gluconobacter oxydans 621H] Length = 552 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 20/147 (13%) Query: 44 ISRVSERGSNTTVIVDTGPDFY-------------MQVLREQVLSIDAVLYTHPHADHIH 90 + +++ G +T + +D G F + ++ + ++ TH H DH+ Sbjct: 25 LYCLTKNGHDTWLAIDCGIGFSGNDTPEAEVLMPDPTFIADRARDLCGLVITHAHEDHLG 84 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDV 148 + L Y VYA P L + + P V + Sbjct: 85 AVAHLWPYL-----RCPVYATPFAAAVLRRKLQEAHLNNQVKIHVIRPGSRFDVGPFDLQ 139 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLG 175 + + + +A+ + HG I G Sbjct: 140 FVSVTHSVAEAQAVALRTPHGLIVHTG 166 >gi|169350548|ref|ZP_02867486.1| hypothetical protein CLOSPI_01316 [Clostridium spiroforme DSM 1552] gi|169292868|gb|EDS75001.1| hypothetical protein CLOSPI_01316 [Clostridium spiroforme DSM 1552] Length = 202 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 7/78 (8%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + + IVD G + + L + L +DA+L TH H DHI +D ++ + Sbjct: 16 YIVSDDDHHCFIVDPGDNGKKVIKFLNDNELILDAILLTHGHFDHIGAVD-----YIYEH 70 Query: 104 RPIDVYAAPDCMKHLFES 121 +Y + + L ++ Sbjct: 71 CHCPIYIHQEDIALLHDA 88 >gi|182417268|ref|ZP_02948619.1| metal-dependent hydrolase of the beta-lactamase superfamily, putative sulfatase [Clostridium butyricum 5521] gi|237667497|ref|ZP_04527481.1| metal-dependent hydrolase of the beta-lactamase superfamily [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378865|gb|EDT76380.1| metal-dependent hydrolase of the beta-lactamase superfamily, putative sulfatase [Clostridium butyricum 5521] gi|237655845|gb|EEP53401.1| metal-dependent hydrolase of the beta-lactamase superfamily [Clostridium butyricum E4 str. BoNT E BL5262] Length = 268 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 85/262 (32%), Gaps = 61/262 (23%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP--D 63 + T+LG G+++ V + + N +VD G Sbjct: 3 NITMLGTGSAM-VTKCYNTC---------------------FTISNDNEHFLVDAGGGNT 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK-QKRPI---------DVYAA 111 + + + +I + +H H DHI G + ++ I ++Y Sbjct: 41 ILSNLEKADISINNIHNMFISHNHNDHILG----AVWVIRSVANSILNSKYNGVFNIYCH 96 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI----LQQ 167 ++ L + + + + + I NN + G I Q Sbjct: 97 KKSIEALKSICSFVLQKKFLKLFDDKILFHEICNN---TSVNILGRPTTFFDINSTKELQ 153 Query: 168 HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGLHSSH 217 HG + L R + + D + E L+ N+DFL+ +A H H Sbjct: 154 HGFTTILENR-KRLTFLGD-EPYRDELLQYCSNIDFLMHEAFCLYSQKDIFKPYEKH--H 209 Query: 218 FSLSESLKKIELINPKNAILTH 239 + ++ + +N KN IL H Sbjct: 210 ATTKDACINADKLNVKNIILYH 231 >gi|297585215|ref|YP_003700995.1| beta-lactamase domain-containing protein [Bacillus selenitireducens MLS10] gi|297143672|gb|ADI00430.1| beta-lactamase domain protein [Bacillus selenitireducens MLS10] Length = 272 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 14/127 (11%) Query: 44 ISRVSERGSNTTVIVDTGPD-FYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + V++DTG L + + + V TH H DH L Sbjct: 27 VRLNVYSYAEDGVLIDTGAHALRESFLPFMKRQNPEQVRITHCHEDHTG-----CAAPLI 81 Query: 102 QKRPIDVYAAPDCMKHLFESFRY-CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 Q + VY + + Y ++ L PP E +P S G + Sbjct: 82 QATGVPVYMDELYAEETRKRADYPLYRKLFWGKRPP------FEARPMPESFASRRGTWQ 135 Query: 161 AIPILQQ 167 IP Sbjct: 136 VIPTPGH 142 >gi|153002975|ref|YP_001377300.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152026548|gb|ABS24316.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 550 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 26/182 (14%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 LRE+ + A+ TH H DHI + + L++ + VY + L Sbjct: 55 LRERREQVGAIYLTHGHEDHIGAL----PFLLREVKA-PVYGTRFTLALLRPRLEEAGVE 109 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIE---AIPILQQHGRISSLG-FRFGNVAYC 184 D R P E + + + I + + G I G F+ Sbjct: 110 ADLREVAPGDARPAGEASPLSAEFYAVTHSIPDACGLALSTPQGTILHSGDFKI------ 163 Query: 185 TDVNAFPAESLEKL-------QNLDFLIIDALKNGLHSSHFSLSE---SLKKIELINPKN 234 D + + + L+ D+ + S S +E +L++ P Sbjct: 164 -DPRPISGPGFDLARVEALGRRGVRLLLSDSTNSERPGSSLSEAEVGAALEEAFERAPAR 222 Query: 235 AI 236 Sbjct: 223 VF 224 >gi|16273189|ref|NP_439427.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae Rd KW20] gi|260581397|ref|ZP_05849211.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae RdAW] gi|2494854|sp|P71374|GLO2_HAEIN RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|1574729|gb|AAC22922.1| hydroxyacylglutathione hydrolase, putative [Haemophilus influenzae Rd KW20] gi|260091939|gb|EEW75888.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae RdAW] Length = 238 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLEKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|309973004|gb|ADO96205.1| Glyoxalase II [Haemophilus influenzae R2846] Length = 233 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q ++++AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFTWLDKQNVTVEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|315032940|gb|EFT44872.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0017] Length = 709 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N + + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPISFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + IE +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIEQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|257080703|ref|ZP_05575064.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] gi|256988733|gb|EEU76035.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis E1Sol] Length = 561 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI G+ +L + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNLHKVKALVITHGHEDHIGGVP-----YLLR 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + + + + ++ I + A Sbjct: 90 QANIPIYAGPLALALITNKLDEHGLLREAELHEINEDTVIRFRKTAISFFRTTHSIPDAL 149 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 GV+ P G I + G F+F Sbjct: 150 GVVVKTP----SGNIVATGDFKFD 169 >gi|269119171|ref|YP_003307348.1| beta-lactamase [Sebaldella termitidis ATCC 33386] gi|268613049|gb|ACZ07417.1| beta-lactamase domain protein [Sebaldella termitidis ATCC 33386] Length = 263 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 12/140 (8%) Query: 50 RGSNTTVIVDTGPDFYMQVLR--EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D G + ++ R E + +DA+L TH H D+I+ +D K Sbjct: 76 SSEKGNILIDPGH-YSEELSRYAESIGGLDAILITHGHWDNIYSLDEAAAANPNAK---- 130 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 +Y L + D + +++ + + + G E I Sbjct: 131 IYIHELDYNFLRDP---VLNCSDINGFSLMLDTKPLTFTEGTYTI--GGYTFEIIHTPGH 185 Query: 168 HGRISSLGFRFGNVAYCTDV 187 S F NV + D Sbjct: 186 TCGSSIFYFEEENVLFGGDT 205 >gi|284990766|ref|YP_003409320.1| beta-lactamase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284064011|gb|ADB74949.1| beta-lactamase domain protein [Geodermatophilus obscurus DSM 43160] Length = 306 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 65/245 (26%), Gaps = 57/245 (23%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGID-------------- 93 R + D G Q+L V S + + +H H DH G+ Sbjct: 28 RWDGEGFLFDPGEGTQRQLLLAGVPSSAVTHLCISHFHGDHCLGVPGVVQRMSLDRVAHP 87 Query: 94 --------------------------GLRGYFLKQKRPI---DVY-AAPDCMKHLFESFR 123 LR L P+ + + HL E+F Sbjct: 88 VSAHFPASGRDHFGRLRAASVFHDVLDLREEPLTADGPVASGPSWTLEARRLDHLVETFG 147 Query: 124 YCFKALDDRT-YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 Y D R P + + DV + + + + G R VA Sbjct: 148 YRLVEPDGRRMLPEQLARAGVAGPDVGRLQREGSLDVGGRTVRLEEVSAHRPGQR---VA 204 Query: 183 YCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAI 236 + D D L+I++ ++ H + ++ + + Sbjct: 205 FVMDT-RLCDAVPALADGADLLVIESTFLEEDAALARAYGHLTARQAATVAAECGVRTLV 263 Query: 237 LTHMH 241 LTH Sbjct: 264 LTHFS 268 >gi|227519836|ref|ZP_03949885.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] gi|227072726|gb|EEI10689.1| metallo-beta-lactamase superfamily hydrolase [Enterococcus faecalis TX0104] Length = 267 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SF K L Sbjct: 57 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFHQVLKQLQ 111 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 112 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 162 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 163 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 214 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 215 GLNNRFKHPHQETLATL 231 >gi|77165044|ref|YP_343569.1| ribonuclease Z [Nitrosococcus oceani ATCC 19707] gi|76883358|gb|ABA58039.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707] Length = 337 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 27/151 (17%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++ D G D + ++L I + +H H DH D L L++++ I ++ P Sbjct: 28 KRALLFDLG-DIRA-LPPRKILRISDIFISHTHMDHFADFDWLLRLVLRREKKIRLFGPP 85 Query: 113 DCMKHLFES---------FRY----CFKALD-----------DRTYPPIVNPIVIENNDV 148 + L Y F A + R N+D+ Sbjct: 86 GFIDQLEHKLKAYSWNLVHNYDNNLAFIATELHPNAASRQALFRCQRAFSQEHQENNSDL 145 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + A + HG I LGF Sbjct: 146 SPGVLIAEPAFRVRTAILDHG-IPCLGFTIE 175 >gi|83589917|ref|YP_429926.1| hypothetical protein Moth_1069 [Moorella thermoacetica ATCC 39073] gi|83572831|gb|ABC19383.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 555 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 34/156 (21%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R N+ +++D G F L E + ++ TH H DHI + Sbjct: 27 RYGNSILVIDCGLTFPEDELLGVDVVIPDYTYLLENRQMVKGIIVTHGHEDHIGAL---- 82 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y LK + VY + + + N + V Sbjct: 83 PYVLKDLN-VPVYGTKLTLALIQAKLK------------EQGNFNGVRLQQVKPRDTLKI 129 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 G I H ++ G + + +D Sbjct: 130 GPFRVEFIHVSHSIADTVALAIHTPVGTIVHTSDFK 165 >gi|15614400|ref|NP_242703.1| hypothetical protein BH1837 [Bacillus halodurans C-125] gi|10174455|dbj|BAB05556.1| BH1837 [Bacillus halodurans C-125] Length = 236 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 13/107 (12%) Query: 52 SNTTVIVDTGPDF---YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 IVDTG + + E++ + VL TH H+DH+ G+ + + + V Sbjct: 29 DEGVYIVDTGMPYMGKRILKEAEKLGKVKGVLLTHGHSDHVGGLKKILDI-----QDLPV 83 Query: 109 YAAPDCMKHLFESFRYCFKALDDRTY---PPIVNPIVIENNDVPICM 152 Y + + F R Y P + P+ ++ + C Sbjct: 84 YV--HTLDIKHMEGKEPFPGRKKREYLVEPGVAKPLPVDEDGEFRCF 128 >gi|172057836|ref|YP_001814296.1| beta-lactamase domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171990357|gb|ACB61279.1| beta-lactamase domain protein [Exiguobacterium sibiricum 255-15] Length = 554 Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L+E I + TH H DHI + Y L+ + + VY + + + Sbjct: 60 LKENKERIQGIFITHGHEDHIGAL----SYVLRDLK-VPVYGTRLTLGLIEIKLKEA--- 111 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 ++ + D + AG I H ++G G + + Sbjct: 112 -------GLLKKADLRPIDAKTKLTVAGHFITF--FRVNHSIPDAVGVCIQTSQGAIVHT 162 Query: 185 TDVN 188 D Sbjct: 163 GDFK 166 >gi|257420577|ref|ZP_05597567.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|257162401|gb|EEU92361.1| metallo-beta-lactamase [Enterococcus faecalis X98] gi|315156404|gb|EFU00421.1| conserved hypothetical protein [Enterococcus faecalis TX0043] Length = 561 Score = 44.4 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI G+ +L + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNLHKVKALVITHGHEDHIGGVP-----YLLR 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + + + + ++ I + A Sbjct: 90 QANIPIYAGPLALALITNKLDEHGLLREAELHEINEDTVIRFRKTAISFFRTTHSIPDAL 149 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 GV+ P G I + G F+F Sbjct: 150 GVVVKTP----SGNIVATGDFKFD 169 >gi|226357274|ref|YP_002787014.1| beta-lactamase [Deinococcus deserti VCD115] gi|226319264|gb|ACO47260.1| putative beta-lactamase [Deinococcus deserti VCD115] Length = 489 Score = 44.4 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--------LSIDAVLYTHPHADHIHGI 92 S+ + ++ G V+VD G L + +DAV+ TH H DH+ + Sbjct: 15 SMHLLTLNTAGGERHVLVDCGLFQGADELEARNHEPFPFEAQDLDAVILTHAHLDHVGRL 74 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMK 116 +++ VY Sbjct: 75 ----PLLVRRGYRGAVYCTAPTAA 94 >gi|254433833|ref|ZP_05047341.1| hypothetical protein NOC27_764 [Nitrosococcus oceani AFC27] gi|207090166|gb|EDZ67437.1| hypothetical protein NOC27_764 [Nitrosococcus oceani AFC27] Length = 327 Score = 44.4 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 27/151 (17%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++ D G D + ++L I + +H H DH D L L++++ I ++ P Sbjct: 18 KRALLFDLG-DIRA-LPPRKILRISDIFISHTHMDHFADFDWLLRLVLRREKKIRLFGPP 75 Query: 113 DCMKHLFES---------FRY----CFKALD-----------DRTYPPIVNPIVIENNDV 148 + L Y F A + R N+D+ Sbjct: 76 GFIDQLEHKLKAYSWNLVHNYDNNLAFIATELHPNAASRQALFRCQRAFSQEHQENNSDL 135 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRFG 179 + A + HG I LGF Sbjct: 136 SPGVLIAEPAFRVRTAILDHG-IPCLGFTIE 165 >gi|14520957|ref|NP_126432.1| mRNA 3'-end processing factor, putative [Pyrococcus abyssi GE5] gi|5458174|emb|CAB49663.1| Cleavage and polyadenylation specficity factor [Pyrococcus abyssi GE5] Length = 651 Score = 44.4 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 66/202 (32%), Gaps = 44/202 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + V+VD G P+F VL+E + +DA++ Sbjct: 202 RSALLVQT-----DESYVLVDFGVNVAALNDPYKAFPHFDAPEFQY-VLKEGL--LDAII 253 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH + L Y L +Y P + + + P+ P Sbjct: 254 ITHAHLDHSGMLPYLFRYNLFDG---PIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRP 310 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQ--QHGRISSLGFRF---------GNVAYCTDVNA 189 I+ G V + P ++ H LG N+A D Sbjct: 311 RDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGNGLHNIAITGDFKF 370 Query: 190 FP----AESLEKLQNLDFLIID 207 P + K L+ L+++ Sbjct: 371 IPTRLLEPANAKFPRLETLVME 392 >gi|46201723|ref|ZP_00054458.2| COG1235: Metal-dependent hydrolases of the beta-lactamase superfamily I [Magnetospirillum magnetotacticum MS-1] Length = 282 Score = 44.4 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 16/164 (9%) Query: 56 VIVDTGPDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA- 111 V+ D G +++ V + +TH H DHI+G + R +D++ Sbjct: 19 VVFDAGTGIRSLGREIIGRGVGHA-QLFFTHTHWDHINGFPFFAPAYNPAFR-LDIHGPK 76 Query: 112 -PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + + + + IV + + S + +H Sbjct: 77 QEGSPRGIQHVLTGQMETPNFPVPLAAMRGIVSYEDFEVGSVFSPYDGVTLRTAPLRHPN 136 Query: 171 ISSLGFRFGN----VAYCTDVNAFP----AESLEKLQNLDFLII 206 + G+R +AY TD P L ++ FL+I Sbjct: 137 -GACGYRLETEGVAMAYITDTEHLPGTPDENVLFLMRGRRFLVI 179 >gi|217963673|ref|YP_002349351.1| metallo-beta-lactamase superfamily protein [Listeria monocytogenes HCC23] gi|217332943|gb|ACK38737.1| metallo-beta-lactamase superfamily protein [Listeria monocytogenes HCC23] gi|307571752|emb|CAR84931.1| metallo-beta-lactamase family protein [Listeria monocytogenes L99] Length = 215 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 37/113 (32%), Gaps = 19/113 (16%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R I VY +P + L + I Sbjct: 60 AVLLTHCHYDHIGALEEIRT-TYN----IPVYVSPLEQEWL--------SNPELNLSAHI 106 Query: 138 VNPIVI----ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +I EN G + +P I S+ F F + D Sbjct: 107 AGKAIIAQPAENEFTLGEYNIEGFQFKVVPTPGH--SIGSVSFIFDDFVVVGD 157 >gi|29377388|ref|NP_816542.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227518210|ref|ZP_03948259.1| metallo-beta-lactamase [Enterococcus faecalis TX0104] gi|227554371|ref|ZP_03984418.1| metallo-beta-lactamase [Enterococcus faecalis HH22] gi|229547597|ref|ZP_04436322.1| metallo-beta-lactamase [Enterococcus faecalis TX1322] gi|229548195|ref|ZP_04436920.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 29200] gi|255970847|ref|ZP_05421433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|255974422|ref|ZP_05425008.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|256618292|ref|ZP_05475138.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256761222|ref|ZP_05501802.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256852485|ref|ZP_05557861.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256958159|ref|ZP_05562330.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256960305|ref|ZP_05564476.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|256962741|ref|ZP_05566912.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|257077432|ref|ZP_05571793.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis JH1] gi|257083377|ref|ZP_05577738.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|257088065|ref|ZP_05582426.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|257091144|ref|ZP_05585505.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257417091|ref|ZP_05594085.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis AR01/DG] gi|257417805|ref|ZP_05594799.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|293382173|ref|ZP_06628116.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|293388516|ref|ZP_06633020.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|294779647|ref|ZP_06745038.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300860840|ref|ZP_07106927.1| ribonuclease J 1 [Enterococcus faecalis TUSoD Ef11] gi|307268849|ref|ZP_07550216.1| hypothetical protein HMPREF9498_00981 [Enterococcus faecalis TX4248] gi|307272663|ref|ZP_07553911.1| hypothetical protein HMPREF9514_01425 [Enterococcus faecalis TX0855] gi|307275092|ref|ZP_07556246.1| hypothetical protein HMPREF9521_00697 [Enterococcus faecalis TX2134] gi|307278555|ref|ZP_07559627.1| hypothetical protein HMPREF9515_00881 [Enterococcus faecalis TX0860] gi|307290819|ref|ZP_07570713.1| hypothetical protein HMPREF9509_01118 [Enterococcus faecalis TX0411] gi|312900400|ref|ZP_07759710.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|312902909|ref|ZP_07762106.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|312905732|ref|ZP_07764754.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312909073|ref|ZP_07767933.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|312952212|ref|ZP_07771090.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|29344855|gb|AAO82612.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis V583] gi|227074366|gb|EEI12329.1| metallo-beta-lactamase [Enterococcus faecalis TX0104] gi|227176490|gb|EEI57462.1| metallo-beta-lactamase [Enterococcus faecalis HH22] gi|229306674|gb|EEN72670.1| metallo-beta-lactamase [Enterococcus faecalis ATCC 29200] gi|229307287|gb|EEN73274.1| metallo-beta-lactamase [Enterococcus faecalis TX1322] gi|255961865|gb|EET94341.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T1] gi|255967294|gb|EET97916.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T2] gi|256597819|gb|EEU16995.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ATCC 4200] gi|256682473|gb|EEU22168.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T3] gi|256712339|gb|EEU27371.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis T8] gi|256948655|gb|EEU65287.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis DS5] gi|256950801|gb|EEU67433.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Merz96] gi|256953237|gb|EEU69869.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis HIP11704] gi|256985462|gb|EEU72764.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis JH1] gi|256991407|gb|EEU78709.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis Fly1] gi|256996095|gb|EEU83397.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis D6] gi|256999956|gb|EEU86476.1| metallo-beta-lactamase [Enterococcus faecalis CH188] gi|257158919|gb|EEU88879.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis ARO1/DG] gi|257159633|gb|EEU89593.1| metallo-beta-lactamase [Enterococcus faecalis T11] gi|291080456|gb|EFE17820.1| metallo-beta-lactamase family protein [Enterococcus faecalis R712] gi|291082120|gb|EFE19083.1| metallo-beta-lactamase family protein [Enterococcus faecalis S613] gi|294453304|gb|EFG21715.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|295114295|emb|CBL32932.1| RNase J1 [Enterococcus sp. 7L76] gi|300849879|gb|EFK77629.1| ribonuclease J 1 [Enterococcus faecalis TUSoD Ef11] gi|306498128|gb|EFM67651.1| hypothetical protein HMPREF9509_01118 [Enterococcus faecalis TX0411] gi|306504792|gb|EFM73990.1| hypothetical protein HMPREF9515_00881 [Enterococcus faecalis TX0860] gi|306508210|gb|EFM77326.1| hypothetical protein HMPREF9521_00697 [Enterococcus faecalis TX2134] gi|306510658|gb|EFM79680.1| hypothetical protein HMPREF9514_01425 [Enterococcus faecalis TX0855] gi|306514853|gb|EFM83401.1| hypothetical protein HMPREF9498_00981 [Enterococcus faecalis TX4248] gi|310628211|gb|EFQ11494.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|310629868|gb|EFQ13151.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|310633681|gb|EFQ16964.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|311290635|gb|EFQ69191.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|311292490|gb|EFQ71046.1| conserved hypothetical protein [Enterococcus faecalis TX0470] gi|315028142|gb|EFT40074.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315030877|gb|EFT42809.1| conserved hypothetical protein [Enterococcus faecalis TX4000] gi|315032294|gb|EFT44226.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315036227|gb|EFT48159.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315145412|gb|EFT89428.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315148796|gb|EFT92812.1| conserved hypothetical protein [Enterococcus faecalis TX4244] gi|315151665|gb|EFT95681.1| conserved hypothetical protein [Enterococcus faecalis TX0012] gi|315154535|gb|EFT98551.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315160104|gb|EFU04121.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315163276|gb|EFU07293.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315165919|gb|EFU09936.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|315169326|gb|EFU13343.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315171819|gb|EFU15836.1| conserved hypothetical protein [Enterococcus faecalis TX1342] gi|315174743|gb|EFU18760.1| conserved hypothetical protein [Enterococcus faecalis TX1346] gi|315576276|gb|EFU88467.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315578916|gb|EFU91107.1| conserved hypothetical protein [Enterococcus faecalis TX0630] gi|315582768|gb|EFU94959.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] gi|323478889|gb|ADX78328.1| metallo-beta-lactamase [Enterococcus faecalis 62] gi|327536077|gb|AEA94911.1| metallo-beta-lactamase superfamily protein [Enterococcus faecalis OG1RF] gi|329573296|gb|EGG54909.1| ribonuclease J 1 [Enterococcus faecalis TX1467] Length = 561 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + + + A++ TH H DHI G+ +L + Sbjct: 35 IIIDAGIKFPEDDLLGIDYVIPDYSYIVQNLHKVKALVITHGHEDHIGGVP-----YLLR 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIV------IENNDVPICMKSAG 156 + I +YA P + + + + + ++ I + A Sbjct: 90 QANIPIYAGPLALALITNKLDEHGLLREAELHEINEDTVIRFRKTAISFFRTTHSIPDAL 149 Query: 157 GVIEAIPILQQHGRISSLG-FRFG 179 GV+ P G I + G F+F Sbjct: 150 GVVVKTP----SGNIVATGDFKFD 169 >gi|325281612|ref|YP_004254154.1| hypothetical protein Odosp_3006 [Odoribacter splanchnicus DSM 20712] gi|324313421|gb|ADY33974.1| hypothetical protein Odosp_3006 [Odoribacter splanchnicus DSM 20712] Length = 201 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQ-VLREQVLSIDAVLYTHPHADHIHGIDG 94 R SS+ +S GS + +VD G + L + I VL TH H DHI+G++ Sbjct: 9 NRLFSSVTYLIISNEGS-SAWVVDPGDMDRLTPYLNNTHIYISGVLLTHAHFDHIYGLNE 67 Query: 95 LRGYFLKQKRPIDVYAAPD 113 + F K VY Sbjct: 68 IIALFPTTK----VYTNEF 82 >gi|77918786|ref|YP_356601.1| hypothetical protein Pcar_1182 [Pelobacter carbinolicus DSM 2380] gi|77544869|gb|ABA88431.1| hypothetical protein Pcar_1182 [Pelobacter carbinolicus DSM 2380] Length = 491 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK---QKRPIDV 108 ++T+++D G + Q+ + I+ ++ TH H DH L ++ +R + + Sbjct: 33 GSSTLLLDCGAPLFQQIGGHGLQEIEGLILTHCHDDHKRWFTDLALFYRYAPDIRRKLRL 92 Query: 109 YAAPDCMKHLFES 121 +L + Sbjct: 93 LTTEAVYHNLKAA 105 >gi|68534252|gb|AAH98612.1| Im:7145112 protein [Danio rerio] Length = 813 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 27/94 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P R S ++ S + ++++D G + Sbjct: 471 EIVFLGTGSSL----------------PMKIRNVSGTLVNISSSQ----SLLLDCGEGTF 510 Query: 66 MQVLR-------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E + + + +H HADH G+ Sbjct: 511 SQMCRHYGDDVDEMLSKLSTIFVSHLHADHHTGL 544 >gi|325969789|ref|YP_004245981.1| beta-lactamase [Vulcanisaeta moutnovskia 768-28] gi|323708992|gb|ADY02479.1| beta-lactamase domain protein [Vulcanisaeta moutnovskia 768-28] Length = 650 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 20/134 (14%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------PDFYMQVLREQVLSIDAVLYTHPHADHIHGI 92 RS++ I R +++++D G D + + ++DA++ TH H DHI Sbjct: 205 RSAILI-----RTKESSILLDCGVKPSSSGDEAPLLDELDLDTLDAIVITHAHMDHIG-- 257 Query: 93 DGLRGYFLKQKRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 Y K VY M+ L Y +A + PP + + Sbjct: 258 --FVPYLFKYGYKGPVYMTEPTKYLMEVLLT--DYIEQAESEGRVPPYSRQDLAQALYHT 313 Query: 150 ICMKSAGGVIEAIP 163 I + A + P Sbjct: 314 ITLNYADHPTDISP 327 >gi|284161558|ref|YP_003400181.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus DSM 5631] gi|284011555|gb|ADB57508.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus DSM 5631] Length = 631 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + + SIDAV+ TH H DH L K VY P Sbjct: 225 QPLDSIDAVVITHAHLDHCG----LVPVLFKYGYRGPVYLTPPTRD 266 >gi|239928575|ref|ZP_04685528.1| hypothetical protein SghaA1_10148 [Streptomyces ghanaensis ATCC 14672] gi|291436900|ref|ZP_06576290.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339795|gb|EFE66751.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 561 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 33/153 (21%) Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKAL 129 R+++ I+ ++ TH H DHI G+ + L++K I + + + + Sbjct: 71 RDRLDDIEGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALI----------- 115 Query: 130 DDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT 185 + + + P +E + + G + I H +L G V + Sbjct: 116 EAKLQEHRIRPYTLEVAE---GQRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTG 172 Query: 186 DVN--AFPAE-------SLEKL--QNLDFLIID 207 D P + + +L + +D L+ D Sbjct: 173 DFKMDQLPLDNRLTDLHAFARLSEEGIDLLLAD 205 >gi|229025725|ref|ZP_04182129.1| Metallo-beta-lactamase [Bacillus cereus AH1272] gi|228735600|gb|EEL86191.1| Metallo-beta-lactamase [Bacillus cereus AH1272] Length = 239 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E L AVL TH H DHI +D +R F Sbjct: 46 YILTNNQNECIIFDPGHEGEKLVTYLQEAQLKPLAVLLTHAHFDHIGAVDAVRDAF---- 101 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 102 -RIPVYVHKE 110 >gi|296125358|ref|YP_003632610.1| RNA-metabolising metallo-beta-lactamase [Brachyspira murdochii DSM 12563] gi|296017174|gb|ADG70411.1| RNA-metabolising metallo-beta-lactamase [Brachyspira murdochii DSM 12563] Length = 635 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 29/155 (18%) Query: 52 SNTTVIVDTGPDF-YMQVLREQVLSID----------AVLYTHPHADHIHGIDGLRGYFL 100 N ++VD G F +L + D ++ TH H DHI I +FL Sbjct: 28 GNEVLVVDCGFMFPRYHMLGIDYVIPDTSYLENKNVIGLILTHGHEDHIGAI----PHFL 83 Query: 101 KQKRPIDVYAAPDCMKHLFESF-RYCFKALDDRTYP-------PIVNPIVIENNDVPICM 152 ++ I +Y + + L Y + D + Y + IE V + Sbjct: 84 RKFPDIPIYGSRLTIAFLTAKLNDYKNEYKDAKLYEVEPRNKIQLGMNFDIEFIRVNHSI 143 Query: 153 KSAGGVIEAIPILQQHGRISSLG-FRFGNVAYCTD 186 G+ P+ G I G F+ ++ TD Sbjct: 144 PDGVGIAITTPL----GVIIHTGDFKI-DLNPTTD 173 >gi|183231003|ref|XP_653303.2| alkyl sulfatase [Entamoeba histolytica HM-1:IMSS] gi|169802677|gb|EAL47917.2| alkyl sulfatase, putative [Entamoeba histolytica HM-1:IMSS] Length = 619 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 13/79 (16%) Query: 50 RGSNTTVIVDT-----GPDFYMQVLREQVLSI--DAVLYTHPHADHIHGIDGLRGYFLKQ 102 +G +I+D + ++++ V + AV+ TH H DH G D + Sbjct: 107 KGQTGWIIIDCMSTIDSSNKAFELIKSTVEDLPVSAVVITHSHFDHFGGYDAVAT----- 161 Query: 103 KRPIDVYAAPDCMKHLFES 121 +Y + LF+ Sbjct: 162 -HDTPLYIPETFYESLFDE 179 >gi|145634396|ref|ZP_01790106.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae PittAA] gi|145268376|gb|EDK08370.1| probable hydroxyacylglutathione hydrolase [Haemophilus influenzae PittAA] gi|301170009|emb|CBW29613.1| predicted hydroxyacylglutathione hydrolase [Haemophilus influenzae 10810] Length = 233 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLEKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|307266450|ref|ZP_07547986.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918558|gb|EFN48796.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 240 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 78/226 (34%), Gaps = 33/226 (14%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK------R 104 NT +++D G + R ++ + ++ +H H+DH+ + LR + Sbjct: 27 ENTHILLDCGSGVISRYQRYYELNKLKYIILSHLHSDHVADMMVLRYALDVMESRGMITE 86 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P++VY +++FE F+ + + N +I + + G I Sbjct: 87 PVNVYCPQ-TPENVFEDFK----------FKDVFNLHII---NEEATLNLEGIEIS---F 129 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFS 219 + + + + Y D + + + D + D G+ H + Sbjct: 130 KKMTHPVETYAVKMKKGEKIFVYSGDT-TYNEDLISFANKADLFLCDGNFLTGMQGPHLT 188 Query: 220 LSESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 +E+ + + K +LTH+ + DY A D Sbjct: 189 AAEAAEIAKKAECKRLVLTHLSPLISIKDYYDEAIKVFGNTEIARD 234 >gi|148380514|ref|YP_001255055.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 3502] gi|148289998|emb|CAL84117.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum A str. ATCC 3502] Length = 567 Score = 44.0 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 42 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 97 Query: 100 LKQKRPIDVYAAPDCM 115 L+ + VY + Sbjct: 98 LRAVN-VPVYGTKLTL 112 >gi|311069081|ref|YP_003974004.1| putative metal-binding hydrolase [Bacillus atrophaeus 1942] gi|310869598|gb|ADP33073.1| putative metal-binding hydrolase [Bacillus atrophaeus 1942] Length = 212 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 A+L TH H DHI +D +R K I VY Sbjct: 50 AILLTHAHFDHIGALDDVRD-----KWNIPVYLHQK 80 >gi|294155829|ref|YP_003560213.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma crocodyli MP145] gi|291600365|gb|ADE19861.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma crocodyli MP145] Length = 615 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 25/162 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR----- 123 L E I+ + TH H DHI G+ L +K ++A +++L F Sbjct: 55 LNEPGKIIEGLFITHGHEDHIGGVVHLLKQVFVKK----IFAPRIAIQYLKLKFEEHGIV 110 Query: 124 ---YCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFG 179 + F ++ ++ + A GV P +G + G FRF Sbjct: 111 QKNHEFIEIEKSAIYNFDEGCKVDFWTAQHSIPDAFGVRITTP----NGSVMCTGDFRFD 166 Query: 180 --NVAYCTDVNAFPAESLEKLQNLDFLIID---ALKNGLHSS 216 + TD + E L L+ D A++ S Sbjct: 167 YTPIGNYTDFSRLDQMGKE---GLTVLMSDSTNAMRPFHSPS 205 >gi|251792199|ref|YP_003006919.1| hydroxyacylglutathione hydrolase [Aggregatibacter aphrophilus NJ8700] gi|247533586|gb|ACS96832.1| hydroxyacylglutathione hydrolase [Aggregatibacter aphrophilus NJ8700] Length = 233 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPD 113 +IVD D +L EQ S++A+L TH HADH G+ KQ+ P + +Y + Sbjct: 24 LIVDLPETDKLFHLLEEQHFSVEALLLTHNHADHTDGV-----AAFKQRFPQVPIYGPAE 78 Query: 114 C 114 C Sbjct: 79 C 79 >gi|182438770|ref|YP_001826489.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467286|dbj|BAG21806.1| putative integral membrane protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 853 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VD GPD + LR+ V + V+ TH HADH+ G+ Sbjct: 617 GEGTGVVVDAGPDPRAVDRCLRDLAVTRVPLVVLTHFHADHVRGL 661 >gi|157692608|ref|YP_001487070.1| zinc (Zn2+)-dependent hydrolase [Bacillus pumilus SAFR-032] gi|157681366|gb|ABV62510.1| zinc (Zn2+)-dependent hydrolase [Bacillus pumilus SAFR-032] Length = 239 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVL----REQVLSIDAVLYTHPHADHIHGIDGLRG 97 ++ N +++D + R++ I+ ++ TH H DHI +D ++ Sbjct: 19 FPVNCYVFEEENGLILIDAALKMAANSIIEFARQKNKPINKIILTHSHMDHIGALDEVKK 78 Query: 98 YF 99 F Sbjct: 79 VF 80 >gi|153931086|ref|YP_001384801.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935734|ref|YP_001388271.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|168180552|ref|ZP_02615216.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226949914|ref|YP_002805005.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|152927130|gb|ABS32630.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931648|gb|ABS37147.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A str. Hall] gi|182668628|gb|EDT80607.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum NCTC 2916] gi|226841039|gb|ACO83705.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A2 str. Kyoto] gi|322806896|emb|CBZ04466.1| Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog [Clostridium botulinum H04402 065] Length = 569 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 44 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 99 Query: 100 LKQKRPIDVYAAPDCM 115 L+ + VY + Sbjct: 100 LRAVN-VPVYGTKLTL 114 >gi|83590276|ref|YP_430285.1| Beta-lactamase-like [Moorella thermoacetica ATCC 39073] gi|83573190|gb|ABC19742.1| Beta-lactamase-like protein [Moorella thermoacetica ATCC 39073] Length = 280 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 19/128 (14%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 R T + DTG +L + I + +H H DH G+ + P Sbjct: 31 RKGEKTFLFDTGAGAAVVQNMLSLGLDPREITTIALSHGHDDHTGGLKKICEIT----GP 86 Query: 106 IDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + VYA PD +Y + ++ Y I + A + P+ Sbjct: 87 LPVYAHPDVFTA-----KYRLREGEEARYIGIPWSRA------ELEASGAVFHLSRQPVE 135 Query: 166 QQHGRISS 173 G + + Sbjct: 136 LAEGIVLT 143 >gi|242790243|ref|XP_002481523.1| metallo-beta-lactamase domain protein, putative [Talaromyces stipitatus ATCC 10500] gi|218718111|gb|EED17531.1| metallo-beta-lactamase domain protein, putative [Talaromyces stipitatus ATCC 10500] Length = 289 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 52 SNTTVIVDTGP------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++DTG VL+E+ + L TH H DH++G+ L Sbjct: 36 GPRRILIDTGEGLPRWATLLQSVLKEENAVVHEALLTHWHHDHVNGVPDLLKIC 89 >gi|206576914|ref|YP_002236513.1| metallo-beta-lactamase family protein [Klebsiella pneumoniae 342] gi|206565972|gb|ACI07748.1| metallo-beta-lactamase family protein [Klebsiella pneumoniae 342] Length = 281 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPD--FYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S I ++ ++ DTG F Q LR + +ID+++ +H H DH G++ L Sbjct: 24 SYLIEHDGQK-----ILFDTGYSDVFLQNAQTLRIDLTTIDSIVLSHGHNDHTWGLNHLT 78 Query: 97 G----YFLKQKRPIDVYAAPDCMK 116 +R I++ PD + Sbjct: 79 QHYDRLNFTPERKINLVCHPDALN 102 >gi|13882195|gb|AAK46775.1| arylsulfatase, putative [Mycobacterium tuberculosis CDC1551] Length = 224 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 35/190 (18%) Query: 79 VLYTHPHADHIHGIDGLR--GYFLK---QKRPIDVYAAPDCMKHLF-------ESFRYCF 126 +L TH H+DHI + + + P+ + P + + Y Sbjct: 1 MLLTHLHSDHIAELGDVLITSWVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRI 60 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG----NVA 182 D T PP PI + G I P + ++GFR +V Sbjct: 61 AHHADLTTPP---PIEVHEYTAGPAWDRDGVTIRVAPTDHR-PVTPTIGFRIESDGASVV 116 Query: 183 YCTDVNAFPAESLEKL-QNLDFLIIDALKNGLHSS------------HFSLSESLKKIEL 229 D P +SL++L D L+ ++ + + H S+ E+ Sbjct: 117 LAGDT--VPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANR 174 Query: 230 INPKNAILTH 239 ++TH Sbjct: 175 AGVGTLVMTH 184 >gi|56419936|ref|YP_147254.1| hypothetical protein GK1401 [Geobacillus kaustophilus HTA426] gi|56379778|dbj|BAD75686.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 279 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 10/122 (8%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLK 101 + V++DTG ID V+ TH H DH FL+ Sbjct: 31 VRLTVRCFVIDGVLIDTGAKSMENEFTSFFQQQDIDQVVITHYHEDHTG-----CAAFLQ 85 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 +K + +Y + + + Y L + + +P + ++A + Sbjct: 86 RKMGLPIYMNELMIHYCQQKADY---PLYRKVFWGKRDPFTAKPIGATFSSRNATWDVIP 142 Query: 162 IP 163 P Sbjct: 143 TP 144 >gi|289761500|ref|ZP_06520878.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289709006|gb|EFD73022.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length = 161 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%) Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLE 196 + + + G + +P L H S G R + +AY D + +E Sbjct: 20 IFDVHHWADSEPVTLGALTIVPRLVAHPT-ESFGLRITDPSGASLAYSGDT-GICDQLVE 77 Query: 197 KLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + +D + +A H S +E+ + +LTH+ Sbjct: 78 LARGVDVFLCEASWTHSPKHPPDLHLSGTEAGMVAAQAGVRELLLTHI 125 >gi|227874908|ref|ZP_03993060.1| possible metal-dependent hydrolase [Mobiluncus mulieris ATCC 35243] gi|227844485|gb|EEJ54642.1| possible metal-dependent hydrolase [Mobiluncus mulieris ATCC 35243] Length = 531 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 36/140 (25%) Query: 52 SNTTVIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F ++ ++ ++ + ++ TH H DHI + Y Sbjct: 7 EGKILIIDCGVLFPEEIQPGVDLILPDFSYIKGRINQVVGMVLTHGHEDHIGAV----PY 62 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA--- 155 LK + I VY + + P + + ++ + + Sbjct: 63 LLKHRSDIPVYGSGLTLA----------------LVEPKLQEHRLPVTNLRVKTEGQRLD 106 Query: 156 GGVIEAIPILQQHGRISSLG 175 G H +L Sbjct: 107 LGPFHLEFCAVNHSIPDALA 126 >gi|188994634|ref|YP_001928886.1| ribonuclease Z [Porphyromonas gingivalis ATCC 33277] gi|254808653|sp|B2RIU4|RNZ_PORG3 RecName: Full=Ribonuclease Z; Short=RNase Z; AltName: Full=tRNA 3 endonuclease; AltName: Full=tRNase Z gi|188594314|dbj|BAG33289.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 304 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 77/275 (28%) Query: 28 CDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPH 85 C P SS I + ++D G Q E++ + + +H H Sbjct: 11 CGSALPTTHHHPSSQVIDL-----RDKLYMIDCGEGVQRQFRHEKLHFGRLIHIFISHLH 65 Query: 86 ADHIHGIDGLRG--YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 DH G+ G L + + V+ E F P V I Sbjct: 66 GDHCFGLPGFISTLGLLGRTGTLHVHGPEG-----IERFLSPILEQFCHRMPYQVEIHTI 120 Query: 144 ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG------------------------ 179 + + + + + +IP+ RI ++G+ F Sbjct: 121 DASRHALVHEDKSVKVYSIPLSH---RIPAVGYLFEEKCRARHLNKAAAEFYNIPLAEYP 177 Query: 180 -----------------------------NVAYCTDVNAFPAESLEKLQNLDFLIIDALK 210 AYC+D F + +Q +D L +A Sbjct: 178 LIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDT-EFCPSIVPIIQGVDLLYHEATF 236 Query: 211 NGLHSS------HFSLSESLKKIELINPKNAILTH 239 + H + E+ + K ++ H Sbjct: 237 MEEDWARAKETFHSTAKEAAEIARQAGAKRLLIGH 271 >gi|195953143|ref|YP_002121433.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] gi|195932755|gb|ACG57455.1| beta-lactamase domain protein [Hydrogenobaculum sp. Y04AAS1] Length = 451 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 9/70 (12%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + +++D G + + L +DAVL TH H DH I L K K Sbjct: 22 DDEKILIDCGLFQGVDEEKSEELGFDPKEVDAVLLTHAHIDHCGRIPMLIKNGFKGK--- 78 Query: 107 DVYAAPDCMK 116 +Y + Sbjct: 79 -IYCTRPTYE 87 >gi|148555908|ref|YP_001263490.1| beta-lactamase domain-containing protein [Sphingomonas wittichii RW1] gi|148501098|gb|ABQ69352.1| beta-lactamase domain protein [Sphingomonas wittichii RW1] Length = 546 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 30/130 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V+VD G F + E+ + V+ TH H DHI I + Sbjct: 30 GKWVMVDLGLTFADPGYPGVELILPDLAFIEERADDLLGVVLTHGHEDHIGAIP-----Y 84 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L + +YA + + LD+ V+ VIEN G Sbjct: 85 LAADLGVPLYATRFTAELIK-------GKLDEEGLTGKVDLHVIENEG-----SFQLGPF 132 Query: 160 EAIPILQQHG 169 + H Sbjct: 133 GFTYVPLAHS 142 >gi|312127057|ref|YP_003991931.1| beta-lactamase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777076|gb|ADQ06562.1| beta-lactamase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 198 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 14/146 (9%) Query: 44 ISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++ G VI+D G D V+ E L A+L TH H DH G +LK Sbjct: 12 VTNCYVFGKKEVVIIDPGDDATKIESVIVENGLVPRAILLTHGHFDHFMGCS-----YLK 66 Query: 102 QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 Q+ + VYA K + + Y L + E+ DV + Sbjct: 67 QRFKLPVYA-HKAEKEILSNPAYNLSYLIGSEIKITCDGY-FEDGDV-FEFADFSLKVLY 123 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDV 187 P S F + N+ + D Sbjct: 124 TPGHTP----GSSCFLYDNILFSGDT 145 >gi|228476402|ref|ZP_04061096.1| ribonuclease J 2 [Streptococcus salivarius SK126] gi|228252024|gb|EEK11062.1| ribonuclease J 2 [Streptococcus salivarius SK126] Length = 553 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 21/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q+ V+ + ++ L + F Sbjct: 55 LIENRDRIQGIFLTHGHADAIGALP-----YILQEVKAPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + N VI+ + I + A E H S+G GN+ Y Sbjct: 103 VKNAGVKKFNNFHVIDA-ETEIEFEDA----EVSFFKTTHSIPESMGIVLGTDQGNIVYT 157 Query: 185 TDVN 188 D Sbjct: 158 GDFK 161 >gi|182701898|ref|ZP_02617301.2| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|237795997|ref|YP_002863549.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] gi|182674227|gb|EDT86188.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Bf] gi|229261531|gb|ACQ52564.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum Ba4 str. 657] Length = 569 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 44 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 99 Query: 100 LKQKRPIDVYAAPDCM 115 L++ + VY + Sbjct: 100 LREVN-VPVYGTKLTL 114 >gi|108757009|ref|YP_633858.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] gi|108460889|gb|ABF86074.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK 1622] Length = 398 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Query: 52 SNTTVIVDTGP-DFY---MQVLREQVLS-IDAVLYTHPHADHIHGI 92 + TV++D+GP D Q LRE V +D + THPH DH+ G+ Sbjct: 49 TGKTVLIDSGPPDARHRLEQRLRELVKEPLDLAILTHPHLDHLGGM 94 >gi|295100634|emb|CBK98179.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Faecalibacterium prausnitzii L2-6] Length = 535 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 9/72 (12%) Query: 50 RGSNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++D G D Y Q + ID VL TH H DH L ++ Sbjct: 20 EAAGQRYLIDCGMEQGKDVYENQPIPVAPGEIDGVLATHAHIDHTG----LLPLLVRNGF 75 Query: 105 PIDVYAAPDCMK 116 +YA + Sbjct: 76 RGRIYATRPTAE 87 >gi|170694222|ref|ZP_02885377.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] gi|170140962|gb|EDT09135.1| beta-lactamase domain protein [Burkholderia graminis C4D1M] Length = 484 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 12/68 (17%) Query: 57 IVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 ++D G + ++ L + ++DAV+ TH H DH + V Sbjct: 29 LIDCGLFQGTKNLRLRNWNPLPVDIGTLDAVILTHAHLDHCG----YLPVLTRMGYRGPV 84 Query: 109 YAAPDCMK 116 Y Sbjct: 85 YCTRGTRD 92 >gi|170760000|ref|YP_001787877.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406989|gb|ACA55400.1| RNA-metabolizing metallo-beta-lactamase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 569 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 44 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 99 Query: 100 LKQKRPIDVYAAPDCM 115 L++ + VY + Sbjct: 100 LREVN-VPVYGTKLTL 114 >gi|168181362|ref|ZP_02616026.1| conserved hypothetical protein [Clostridium botulinum Bf] gi|182675265|gb|EDT87226.1| conserved hypothetical protein [Clostridium botulinum Bf] Length = 247 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 66/222 (29%) Query: 52 SNTTVIVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++++ G D+ + L + + L +H H+DH Sbjct: 19 GEEKLLLECGIDWRNILKGLNYSIKGVKGCLISHKHSDHC-------------------- 58 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYP-PIVNPIVIENNDVPICM----KSAGGVIEAIPI 164 +SF+ F++L P ++ + M K G + Sbjct: 59 ----------KSFKRAFESLPKVCAPLEVLEKYNCKEYHKAFLMQHLDKVRLGEFTVMAF 108 Query: 165 LQQHGR-----ISSLGFR-----FGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------ 208 +H LG+ G + + TD K +N+D ++I+ Sbjct: 109 KAEHTNSDATECECLGYLIQHSQIGKILFATDTYYL----KYKFKNVDHILIECNYSERY 164 Query: 209 ------LKNGLHSSHFSLS---ESLKKIELINPKNAILTHMH 241 + SH SL E+LK +L N K L H+ Sbjct: 165 MEDLESYQTRTFKSHMSLETLKETLKTWDLSNTKTITLVHLS 206 >gi|313807215|gb|EFS45702.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2] Length = 215 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 49/209 (23%) Query: 40 SSLKISRVSERGSNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 S + + +R ++VD G + + +DA+L TH H DH+ Sbjct: 9 SCILVEAAGQR-----ILVDPGNLSKSWR------GLTDLDAILVTHRHPDHV------- 50 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 P+ + L ++ ++ I ++ + V Sbjct: 51 --------------DPEHIGALVDANSGAVVRAEEGACHEIP---ALDADPVAPGDVLQI 93 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAY-----CTDVNAFPAESLEKL-QNLDFLIIDALK 210 G + + H I GNV Y + P + L++ + +D L A Sbjct: 94 GEVRIEVVGGHHAVIHRDLEPIGNVGYLIGEGLGTILYHPGDELDETPRGVDVLACPA-- 151 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH 239 H+ ++ E++ + ++ L H Sbjct: 152 ---HAPWAAMKETVDFARSVGARHGFLIH 177 >gi|311695297|gb|ADP98170.1| metallo-beta-lactamase family protein [marine bacterium HP15] Length = 453 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 54/196 (27%), Gaps = 45/196 (22%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V+VD G ++ LR + +IDAV+ TH H DH + L K Sbjct: 20 SDEKHRVLVDCGMYQGVKTLRRRNWAKFPVDPSTIDAVVLTHAHIDHSGYLPALVKNGFK 79 Query: 102 QKRPIDVYAAPDCMKHLFESFRYC-FKALDDRTYPPIVNPIVIENNDVPICMKSA----- 155 K VY + F +D Y E + K A Sbjct: 80 GK----VYCTKATHELCKVLLPDAGFLQEEDAKYAFRKKFSKHEKPEPLFTEKDAWEALK 135 Query: 156 ---------------GGVIEAIP---------ILQQHGRISSLGFRFGNVAYCTDVNAFP 191 G + P + H G+V D+ P Sbjct: 136 HFESLHYHEAFEPVKGFQVTFTPAGHILGSSCVHVHHQGADRTVVFSGDVGRQNDIIMRP 195 Query: 192 AESLEKLQNLDFLIID 207 E LQ D LI + Sbjct: 196 P---EPLQKADVLICE 208 >gi|312868828|ref|ZP_07729017.1| metallo-beta-lactamase domain protein [Lactobacillus oris PB013-T2-3] gi|311095671|gb|EFQ53926.1| metallo-beta-lactamase domain protein [Lactobacillus oris PB013-T2-3] Length = 268 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 27/175 (15%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +++D G ++ L ++ ++A+ TH H+DH HG+ L ++ + Sbjct: 26 DQHRILIDAGLSGKKIEGLMAKIGRSLDDVEAIFVTHEHSDHCHGVG-----VLARRYGM 80 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VYA + + +D+ + N + + + E Sbjct: 81 AVYANRGTWQAMANKVG---AIPEDQQFIFNPNSVQTLGDLDIESFAVSHDAAEPQFYQV 137 Query: 167 QHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS 215 H TD +++ D +++ L+ G +S Sbjct: 138 HHDN--------KTFCILTDTGYVSDRVAGTIRDADAYLMECNHDTEMLRMGPYS 184 >gi|291520785|emb|CBK79078.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Coprococcus catus GD/7] Length = 533 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 9/75 (12%) Query: 50 RGSNTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + +++D G + Y Q + +D V TH H DH + Q Sbjct: 20 EAAGKKILIDCGMEQGKNLYENQEIPVPASDVDYVFLTHAHIDHSG----MLPLLYNQGF 75 Query: 105 PIDVYAAPDCMKHLF 119 VY + Sbjct: 76 KGSVYTTEATQQLCQ 90 >gi|268680752|ref|YP_003305183.1| metallo-beta-lactamase family protein [Sulfurospirillum deleyianum DSM 6946] gi|268618783|gb|ACZ13148.1| metallo-beta-lactamase family protein [Sulfurospirillum deleyianum DSM 6946] Length = 386 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 9/75 (12%) Query: 42 LKISRVSERGSNTTVIVDTG--PDFYMQVL-REQVLS------IDAVLYTHPHADHIHGI 92 I G ++DTG ++ Q RE + I+A++ +H H DH G+ Sbjct: 142 ALIEVERLDGVKKKYLLDTGWSYEWMDQCFKREGIDKMLANNEIEALIISHEHFDHFWGL 201 Query: 93 DGLRGYFLKQKRPID 107 Y K I Sbjct: 202 PVTMKYAPNIKIIIP 216 >gi|157876175|ref|XP_001686447.1| cleavage and polyadenylation specificity factor [Leishmania major strain Friedlin] gi|68129521|emb|CAJ08064.1| putative cleavage and polyadenylation specificity factor [Leishmania major strain Friedlin] Length = 756 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 51/190 (26%), Gaps = 37/190 (19%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHG 91 RS + + V++D G L + ID VL TH H DH Sbjct: 39 RSCVVVQYKG-----RGVMLDCGNHPAKSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGA 93 Query: 92 IDGLRGYFLKQ---KRPIDVYAAPDC---MKHLFESFRYCFKALDDRTYPPIVNPIVIEN 145 + YF Q K V+ K + F D + + Sbjct: 94 L----PYFCNQTSFKGR--VFMTSATKAFYKMVMNDFLRIGAGASDLVTSEWLQSTIDRI 147 Query: 146 NDVPICMKSAGGVIEAIPILQQH------GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199 V + I P H + G R Y D + P L + Sbjct: 148 ETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVDIAGMR---ALYTGDFSRVPDRHLLGAE 204 Query: 200 ----NLDFLI 205 + D LI Sbjct: 205 VPPYSPDILI 214 >gi|95929350|ref|ZP_01312093.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] gi|95134466|gb|EAT16122.1| beta-lactamase-like [Desulfuromonas acetoxidans DSM 684] Length = 475 Score = 44.0 bits (103), Expect = 0.021, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Query: 50 RGSNTTVIVDTG----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G++ ++++D G D + + +I A++ TH H DH+ I Y L Sbjct: 29 CGADESLLIDCGLFQGADQRNPEIDFGIEAIRALIVTHVHLDHVGRI----PYLLAAGFS 84 Query: 106 IDVYAAP 112 +Y +P Sbjct: 85 GPIYCSP 91 >gi|257887578|ref|ZP_05667231.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257896074|ref|ZP_05675727.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|293377490|ref|ZP_06623686.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] gi|293571928|ref|ZP_06682942.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|257823632|gb|EEV50564.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium 1,141,733] gi|257832639|gb|EEV59060.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|291607946|gb|EFF37254.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium E980] gi|292643859|gb|EFF61973.1| metallo-beta-lactamase domain protein [Enterococcus faecium PC4.1] Length = 208 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 12/134 (8%) Query: 56 VIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +I+D G D Q +++ A+L TH H DHI ++ LR Y+ I VY +P Sbjct: 25 LIIDPGEDAEQIKQEIKKTNQQPVAILLTHTHYDHIGAVEPLRAYY-----QIPVYVSPL 79 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRIS 172 K L + L + I++ + MK+ G + + I Sbjct: 80 EQKWLGD----PILNLSGLGRHDDIADIIVSPAEYEFEMKTYTLGNMSFRVVPTPGHSIG 135 Query: 173 SLGFRFGNVAYCTD 186 S+ F F + D Sbjct: 136 SVSFIFDDFVVSGD 149 >gi|218753050|ref|ZP_03531846.1| hypothetical protein MtubG1_06224 [Mycobacterium tuberculosis GM 1503] Length = 159 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%) Query: 142 VIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----VAYCTDVNAFPAESLE 196 + + + G + +P L H S G R + +AY D + +E Sbjct: 18 IFDVHHWADSEPVTLGALTIVPRLVAHPT-ESFGLRITDPSGASLAYSGDT-GICDQLVE 75 Query: 197 KLQNLDFLIIDAL----KNGLHSSHFSLSESLKKIELINPKNAILTHM 240 + +D + +A H S +E+ + +LTH+ Sbjct: 76 LARGVDVFLCEASWTHSPKHPPDLHLSGTEAGMVAAQAGVRELLLTHI 123 >gi|149279547|ref|ZP_01885676.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] gi|149229583|gb|EDM34973.1| metallo-beta-lactamase superfamily protein [Pedobacter sp. BAL39] Length = 263 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 52/231 (22%) Query: 52 SNTTVIVDTGPDFYM---QVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 V++D G ++ R + + A+ +H H DHI G+ L F + Sbjct: 25 EEEAVLIDAGISCRETEKRMTRLGLDMGKVKAIFISHEHTDHIKGLCTLSAKF-----NL 79 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 VY M L F + + + PI + I+ G + + Sbjct: 80 PVYITRGTM--LNCKFS-----IREDLFRPISSHQTIQ-----------IGALRVKVFPK 121 Query: 167 QHGRISSLGFRFG----NVAYCTDVNAFPAESLEKLQNLDFLIIDA------LKNGLHS- 215 H I F V TD+ A + ++ + ++A L + Sbjct: 122 IHDAIEPHSFMVSCGETKVGVFTDLGAACEQLVDHFRQCHAAFLEANYDDELLSKSAYPY 181 Query: 216 ----------SHFSLSESLKKIELINP---KNAILTHMHVDLDYDMVLKST 253 H S ++L+ P + +L+H+ D + +++ Sbjct: 182 FLKKRISGGRGHLSNKQALELFTTHRPAFMSHLLLSHLSKDNNNPQLVQDL 232 >gi|161522914|ref|YP_001585843.1| beta-lactamase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189348255|ref|YP_001941451.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|160346467|gb|ABX19551.1| beta-lactamase domain protein [Burkholderia multivorans ATCC 17616] gi|189338393|dbj|BAG47461.1| metallo-beta-lactamase family protein [Burkholderia multivorans ATCC 17616] gi|325521096|gb|EGD00014.1| metallo-beta-lactamase family protein [Burkholderia sp. TJI49] Length = 467 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYMQ---VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V+VD G + ++ L ++DAV+ TH H DH ++ Sbjct: 20 EHGGRRVLVDCGLFQGTKNLRLRNWRTLPLAPDTLDAVVLTHAHIDHTG----YLPVLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 + VY + Sbjct: 76 EGYRGPVYCTAATAE 90 >gi|195451117|ref|XP_002072775.1| GK13503 [Drosophila willistoni] gi|194168860|gb|EDW83761.1| GK13503 [Drosophila willistoni] Length = 652 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 38/170 (22%) Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + ++ +H HADH G+ +K + +Y +P + + F LDD Sbjct: 243 IPNVTHYFLSHYHADHYIGL--------TRKFSLPIYMSPTTARLVRT-----FIKLDD- 288 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-----GNVAYCTDV 187 I N++ + IE I H +L F F + + D Sbjct: 289 ----------IYINEIDVDQTIIIDNIEITAIDANHCP-GALMFFFKLSSGQTILHTGDF 337 Query: 188 NA-FPAESLEKLQN---LDFLIIDA--LKNGLHSSHF--SLSESLKKIEL 229 A F ESL N LD L +D L SH S+ ++ ++ Sbjct: 338 RANFEMESLPIFWNNPQLDVLYLDTTYLNKNYDFSHQSESIDRAVSLVKE 387 >gi|88604008|ref|YP_504186.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] gi|88189470|gb|ABD42467.1| beta-lactamase-like protein [Methanospirillum hungatei JF-1] Length = 257 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I +D GPD + + V +D ++ THPH DHI G+ + Q Sbjct: 36 LIRHNGHTMLIDAGDMDAGPDILSYLQYQGVTRLDVLVSTHPHTDHIGGMSDIL-----Q 90 Query: 103 KRPIDVYAA 111 P+ +Y Sbjct: 91 ALPVSLYVD 99 >gi|167036968|ref|YP_001664546.1| beta-lactamase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115386|ref|YP_004185545.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855802|gb|ABY94210.1| beta-lactamase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928477|gb|ADV79162.1| beta-lactamase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 616 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 17/91 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTG-----PDFYMQVLRE---QVLSIDAVLYTHPHADHIHG 91 SS +S +++D G Y ++ + ID V+ TH H DH G Sbjct: 216 SSYLVSY-----EGINILLDAGALIKDKTLYYNSIKNLPIDIKDIDLVIITHAHLDHSAG 270 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 I L L + + + L + F Sbjct: 271 IVELLRKGLNS----PIIMSRPTKEILKQIF 297 >gi|327395216|dbj|BAK12638.1| hypothetical protein PAJ_2558 [Pantoea ananatis AJ13355] Length = 389 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 +DA+ TH H DH +D + VYA + L E Sbjct: 74 GHVDAICLTHSHGDHTGALDSWQAL-----GSPPVYATELTWQQLGE 115 >gi|326389878|ref|ZP_08211442.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] gi|325994146|gb|EGD52574.1| beta-lactamase domain-containing protein [Thermoanaerobacter ethanolicus JW 200] Length = 240 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 78/226 (34%), Gaps = 33/226 (14%) Query: 52 SNTTVIVDTGPDFYMQVLRE-QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK------R 104 NT +++D G + R ++ + ++ +H H+DH+ + LR + Sbjct: 27 ENTHILLDCGSGVISRYQRYYELNKLKYIILSHLHSDHVADMMVLRYALDIMESRGMITE 86 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 P++VY +++FE F+ + + N +I + + G I Sbjct: 87 PVNVYCPQ-TPENVFEDFK----------FKDVFNLHII---NEEATLNLEGIEIS---F 129 Query: 165 LQQHGRISSLGFRFGN----VAYCTDVNAFPAESLEKLQNLDFLIIDA-LKNGLHSSHFS 219 + + + + Y D + + + D + D G+ H + Sbjct: 130 KKMTHPVETYAVKMKKGEKIFVYSGDT-TYNEDLISFANKADLFLCDGNFLTGMQGPHLT 188 Query: 220 LSESLKKIELINPKNAILTHMHVDL---DYDMVLKSTPSRVVPAFD 262 +E+ + + K +LTH+ + DY A D Sbjct: 189 AAEAAEIAKKAECKRLVLTHLSPLISIKDYYDEAIKVFGNTEIARD 234 >gi|302795827|ref|XP_002979676.1| hypothetical protein SELMODRAFT_111409 [Selaginella moellendorffii] gi|300152436|gb|EFJ19078.1| hypothetical protein SELMODRAFT_111409 [Selaginella moellendorffii] Length = 733 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 28/98 (28%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG G +P R S + ERG +++D G Sbjct: 408 DDLEIVFLGTG----------------SMHPSKHR-NVSAIYLHLFERGG---MLLDCGE 447 Query: 63 DFYMQV-LREQVLSIDAVL-------YTHPHADHIHGI 92 Y Q+ R + D+VL +H HADH G+ Sbjct: 448 GTYGQLKRRYGIQGADSVLANLKCIWISHIHADHQSGL 485 >gi|320010876|gb|ADW05726.1| ComEC/Rec2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 731 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VDTGP+ + LR+ V + +L TH HADH+ G+ Sbjct: 494 GDGTGVVVDTGPEPRLVDRCLRDLGVTRVPLLLLTHFHADHVRGL 538 >gi|288572942|ref|ZP_06391299.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568683|gb|EFC90240.1| beta-lactamase domain protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 601 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 27/106 (25%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVI--------VDTGPDFYMQ-------------VL 69 T PK+ R + + + E G N ++ +D G F + L Sbjct: 45 TRPKDGTLRF-IPLGGIGEIGKNMYLLEFGEDMIVIDCGLMFPEEEMLGIDFVIPDTTYL 103 Query: 70 REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCM 115 + +L TH H DH+ + + L + VY + Sbjct: 104 EANKDRVKGILLTHGHEDHVGAL----PFVLP-GLDVPVYGTKLTL 144 >gi|227499545|ref|ZP_03929652.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus tetradius ATCC 35098] gi|227218304|gb|EEI83558.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus tetradius ATCC 35098] Length = 568 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%) Query: 52 SNTTVIVDTGPDFYM-QVL------------REQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F ++L E + + TH H DHI I Y Sbjct: 36 GNDMIMIDCGLTFPDAEMLGVDIVIPDFTYVEENKNKLRGIFVTHGHEDHIGAI----PY 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 FLK +VY + L F+ +NP I+ +V +K+ Sbjct: 92 FLKN-VDTNVYCSKLTKGLLENKFK-----------EHGLNPNKIKMVNVNNTVKAGSLS 139 Query: 159 IEAIPILQQHGRISSLGFR--FGNVAYCTDVN 188 E I + ++ + G V + D Sbjct: 140 AEFIRVSHSIPDSCAIAVKSPIGTVIFTGDFK 171 >gi|159904868|ref|YP_001548530.1| beta-lactamase domain-containing protein [Methanococcus maripaludis C6] gi|159886361|gb|ABX01298.1| beta-lactamase domain protein [Methanococcus maripaludis C6] Length = 433 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 50/170 (29%), Gaps = 18/170 (10%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVL---SIDAVLYTHPHADHIHGIDGLRGYFLK 101 S V + +TV+ D G + +L + D V +H H DH GI ++ Sbjct: 15 SCVEVKTEKSTVLFDCGVKLSHEESEYPILDNLNADCVFASHAHLDHTGGI----PLLIR 70 Query: 102 QKRPIDVYAAPDC----MKHLFESFRYCFKALDDRTY-PPIVNPIVIENNDVPICMKSAG 156 + +YA + L +S + D Y VN + Sbjct: 71 KGMVPAIYATEVTKAISKELLRDSIKIAGVEGQDIPYDRADVNKSLNLFRKARYNHPKNF 130 Query: 157 GVIEAIPILQQH---GRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDF 203 E H SL + V Y D + ++ D Sbjct: 131 KDFEFEFFNAGHIPGSSTISLNYSGKRVVYTGDTKV---SDTDLVKGADL 177 >gi|163853852|ref|YP_001641895.1| beta-lactamase domain-containing protein [Methylobacterium extorquens PA1] gi|163665457|gb|ABY32824.1| beta-lactamase domain protein [Methylobacterium extorquens PA1] Length = 349 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 52/170 (30%), Gaps = 13/170 (7%) Query: 50 RGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R ++D G F ID +L++H H DH G+ + L R I Sbjct: 91 RCGERLFVIDAGSGLGAFGRNCCESLPQDID-LLFSHLHLDHTAGLPFFKPAVLDGARTI 149 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y ++ F ++ + + I IL Sbjct: 150 HTYCGNLDGASAEDALGRLFSPPLFPVTLDVLPCSFAHHGFRAGEPLTFADGIRVDTILL 209 Query: 167 QHGRISSLGFRFG----NVAYCTD----VNAFPAESLEKLQNLDFLIIDA 208 H + S G+RF + +D VN + ++ D L+ D Sbjct: 210 DHPQ-GSTGYRFDHGGKRLCIISDIEHGVNWPDPDLCRFVEGADLLVYDG 258 >gi|90422984|ref|YP_531354.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] gi|90104998|gb|ABD87035.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 287 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 18/70 (25%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLS--------------IDAVLYTHP 84 S++ I+ RG+ TV++D G LR ID +L TH Sbjct: 59 PSAIDINCYLVRGAGRTVLIDAGAG----ALRPGGGRLAANLRLAGIAPSDIDTILLTHA 114 Query: 85 HADHIHGIDG 94 H DH+ G+ Sbjct: 115 HPDHVGGLLD 124 >gi|312623194|ref|YP_004024807.1| beta-lactamase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203661|gb|ADQ46988.1| beta-lactamase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 264 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 14/58 (24%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSI------DAVLYTHPHADHIHGI 92 S+ I + + ++ D G + + + + DAV+ +H H DH G+ Sbjct: 23 SILIEK-----DDKKILFDCGQT---NAIVKNIEKMGVGFDFDAVVLSHAHYDHTGGL 72 >gi|302389407|ref|YP_003825228.1| beta-lactamase domain protein [Thermosediminibacter oceani DSM 16646] gi|302200035|gb|ADL07605.1| beta-lactamase domain protein [Thermosediminibacter oceani DSM 16646] Length = 295 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Query: 52 SNTTVIVDTG-----PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +T++VD G + ++ + IDAV+ THPH DHI +D + + + Sbjct: 64 GGSTMLVDAGNNDDAKTVINYIRKKGIKRIDAVVATHPHEDHIGAMDDVI-HTFDIGK-- 120 Query: 107 DVYAAPDC 114 +Y Sbjct: 121 -IYMPRVT 127 >gi|295690915|ref|YP_003594608.1| metallo-beta-lactamase protein [Caulobacter segnis ATCC 21756] gi|295432818|gb|ADG11990.1| metallo-beta-lactamase protein [Caulobacter segnis ATCC 21756] Length = 521 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + TV++D G Q +V +DAVL TH H DH G+ + Sbjct: 36 EHATVLIDCGMFQGSKTLKALNYQPFPFEVGKVDAVLLTHAHIDH-SGLLPKLMLAGFEG 94 Query: 104 RPIDVYAAPDCMK 116 +YA Sbjct: 95 ---PIYATAATRD 104 >gi|256545150|ref|ZP_05472516.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis ATCC 51170] gi|256399191|gb|EEU12802.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis ATCC 51170] Length = 556 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 18/84 (21%) Query: 53 NTTVIVDTGPDFYMQ-VL------------REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N +++D G F + +L E + + TH H DHI GI + Sbjct: 27 NEMIMIDCGLTFPDEDMLGVDIVIPDFTYVEENKDKLKGIFITHGHEDHIGGI-----AY 81 Query: 100 LKQKRPIDVYAAPDCMKHLFESFR 123 L + +VY + L F+ Sbjct: 82 LLKTVDTNVYCSKLTKGLLENKFK 105 >gi|225851295|ref|YP_002731529.1| ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) [Persephonella marina EX-H1] gi|225646432|gb|ACO04618.1| ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease) [Persephonella marina EX-H1] Length = 327 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 ++ D G + ++ R + I V TH H DH G D L L + +D++ Sbjct: 25 ESLGEYILFDVG-NIR-RLDRHLLRKITKVFITHTHMDHFIGFDHLLRNKLGKPHTVDIF 82 Query: 110 AAPDCMKHLF 119 +L+ Sbjct: 83 GISPIADNLY 92 >gi|222445335|ref|ZP_03607850.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii DSM 2375] gi|261350104|ref|ZP_05975521.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii DSM 2374] gi|222434900|gb|EEE42065.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii DSM 2375] gi|288860890|gb|EFC93188.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii DSM 2374] Length = 636 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 19/88 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RSS+ + N+ V++D G + Y+ V + +DAV+ +H H DH Sbjct: 193 RSSMLLQTP-----NSRVLLDCGVNVAASDNKNAFPYLNVPEFSIEELDAVIISHAHLDH 247 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Y +Y Sbjct: 248 CG----FVPYLYHYGYEGPIYCTTPTRD 271 >gi|167758323|ref|ZP_02430450.1| hypothetical protein CLOSCI_00662 [Clostridium scindens ATCC 35704] gi|167664220|gb|EDS08350.1| hypothetical protein CLOSCI_00662 [Clostridium scindens ATCC 35704] Length = 313 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 19/201 (9%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 I + D G + + + +D +L +HP ADHI G D + F Q Sbjct: 76 LIQAGGQNMVMDVGNNDQGERVVSYLKEQGIGKLDYLLLSHPDADHIGGGDNVLENFEVQ 135 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE-- 160 + A D M + E + D YP + + + + + + V + Sbjct: 136 TVIMPEVAN-DTMTY-QEVMEEISRYDVDVKYPEVGDIFTLGDAEFTVLCPEPELVSQDD 193 Query: 161 ----AIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 ++ I HG + C D A + + K L D LK G H S Sbjct: 194 MNNSSVGIKLVHGE--------NSFVMCGDAEAKSEQEMVKRFGSS-LECDVLKCGHHGS 244 Query: 217 HFSLSESLKKIELINPKNAIL 237 + + S + + +NP A++ Sbjct: 245 --NTATSDEFLAAVNPTWAVI 263 >gi|158521041|ref|YP_001528911.1| beta-lactamase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158509867|gb|ABW66834.1| beta-lactamase domain protein [Desulfococcus oleovorans Hxd3] Length = 307 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%) Query: 52 SNTTVIVDTGP----DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF-----LKQ 102 T++VDTGP D + L E DA+L TH H DH GI + F + Sbjct: 36 GKKTLLVDTGPSVTADALLSALAEIRCRPDAILLTHIHIDHAGGIGRVSNAFPGTPVICH 95 Query: 103 KRPIDVYAAPD 113 ++ I P+ Sbjct: 96 EKAIPHLVNPE 106 >gi|118122584|ref|XP_001236135.1| PREDICTED: similar to CGI-83 protein, partial [Gallus gallus] Length = 247 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Query: 54 TTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +SI +L TH H DH GI + Sbjct: 41 RRILIDTGEPAIPEYIGCLKQALSEFNISIQEILVTHWHRDHTGGIPDI 89 >gi|307720231|ref|YP_003891371.1| cyclic-AMP phosphodiesterase [Sulfurimonas autotrophica DSM 16294] gi|306978324|gb|ADN08359.1| cyclic-AMP phosphodiesterase [Sulfurimonas autotrophica DSM 16294] Length = 260 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 8/129 (6%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG-YFLKQKRPIDVYAA 111 N ++D G + L E L I+ + TH H DHI I + YF K+ + +++ Sbjct: 27 NRHTVIDAG--NLLDALAEDSLHIENIYLTHSHLDHISDIAYIIDNYFCKRSKTLNIIGL 84 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG---VIEAIPILQQH 168 P ++ L E F D P+ N VI + + P+ H Sbjct: 85 PQTIQALKEHFLNDIIWPDFSK-IPLENSDVIAVKYSELYLNEEYHLDKQTTLTPVRTDH 143 Query: 169 GRISSLGFR 177 + S G+ Sbjct: 144 -TVPSCGYI 151 >gi|195059573|ref|XP_001995664.1| GH17641 [Drosophila grimshawi] gi|193896450|gb|EDV95316.1| GH17641 [Drosophila grimshawi] Length = 292 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 +++DTG + VLR++ SI ++ TH H DH+ G+ + G L K Sbjct: 38 GKKRILIDTGDEDVPEYIEHLNGVLRQEQASIATIILTHWHHDHVGGVKDIVGSTLADKD 97 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 VY P ++ C + P+++ + + + + G + Sbjct: 98 C-QVYKFPR-----NDANDICPEIPAHIPVRPLLDNQELAVDGAKVRIVHTPGHTTDHVV 151 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLD 202 L + G F + A + E +++LD Sbjct: 152 LA-----TEDGMLFSGDCILGEGTAVFEDLYEYMRSLD 184 >gi|187778855|ref|ZP_02995328.1| hypothetical protein CLOSPO_02450 [Clostridium sporogenes ATCC 15579] gi|187772480|gb|EDU36282.1| hypothetical protein CLOSPO_02450 [Clostridium sporogenes ATCC 15579] Length = 567 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 18/76 (23%) Query: 53 NTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 N V++D G F L++ + + + TH H DHI + Y Sbjct: 42 NDIVVIDCGLKFPDDDMLGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGAL----PYV 97 Query: 100 LKQKRPIDVYAAPDCM 115 L++ + VY + Sbjct: 98 LREVN-VPVYGTKLTL 112 >gi|167745864|ref|ZP_02417991.1| hypothetical protein ANACAC_00558 [Anaerostipes caccae DSM 14662] gi|167654728|gb|EDR98857.1| hypothetical protein ANACAC_00558 [Anaerostipes caccae DSM 14662] Length = 574 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 15/62 (24%) Query: 46 RVSERGSNTTVIVDTGPDFYMQ---------------VLREQVLSIDAVLYTHPHADHIH 90 + + S ++D GPD+Y + + +V ++ VL THPH DHI Sbjct: 55 QYGDGDSARYALIDAGPDYYTRTNGSKVDTSERVHKYLTDHKVTKLEFVLLTHPHRDHIA 114 Query: 91 GI 92 G+ Sbjct: 115 GM 116 >gi|148643098|ref|YP_001273611.1| metal-dependent RNase [Methanobrevibacter smithii ATCC 35061] gi|148552115|gb|ABQ87243.1| predicted metal-dependent RNase [Methanobrevibacter smithii ATCC 35061] Length = 636 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 19/88 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDF----------YMQVLREQVLSIDAVLYTHPHADH 88 RSS+ + N+ V++D G + Y+ V + +DAV+ +H H DH Sbjct: 193 RSSMLLQTP-----NSRVLLDCGVNVAASDNKNAFPYLNVPEFSIEELDAVIISHAHLDH 247 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 Y +Y Sbjct: 248 CG----FVPYLYHYGYEGPIYCTTPTRD 271 >gi|254250482|ref|ZP_04943801.1| Beta-lactamase-like [Burkholderia cenocepacia PC184] gi|124879616|gb|EAY66972.1| Beta-lactamase-like [Burkholderia cenocepacia PC184] Length = 281 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 10/64 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADH 88 S++ I+ RG+ TV++D G + + +ID VL TH H DH Sbjct: 51 PSAVHINCYVVRGAGRTVLIDAGAGGIKQWGGRLMDNLRLAGIEPAAIDTVLLTHAHPDH 110 Query: 89 IHGI 92 + G+ Sbjct: 111 VGGL 114 >gi|16081753|ref|NP_394139.1| hypothetical protein Ta0668 [Thermoplasma acidophilum DSM 1728] gi|10639954|emb|CAC11806.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 322 Score = 44.0 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 17/138 (12%) Query: 52 SNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 ++ ++D+G D ++ + + + ID V TH H DH+ G+ +L +K I Y Sbjct: 38 DDSAFLIDSGMSDNSIKSIEQNLKKIDFVFITHLHIDHLGGV-----LYLHEKYGIPAYM 92 Query: 111 APDCMKHLFESF----RYCFKALD---DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + + + Y + + PP + +I + V + Sbjct: 93 NHLDLDLIMNANEDRDGYIKRHSEIFRVNGVPPSMVEEIITMHPVIRYFDYYSK----LD 148 Query: 164 ILQQHGRISSLGFRFGNV 181 +Q + +I++ G +F V Sbjct: 149 FVQDYRKINASGIKFVEV 166 >gi|319938002|ref|ZP_08012402.1| hypothetical protein HMPREF9488_03238 [Coprobacillus sp. 29_1] gi|319806908|gb|EFW03547.1| hypothetical protein HMPREF9488_03238 [Coprobacillus sp. 29_1] Length = 298 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Query: 50 RGSNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGL 95 +G++ +++D G Q++ ++ V ID + TH H DH+ G + Sbjct: 55 QGNDFNILIDAGNKADSQLMIDFLQKKNVNKIDIAVGTHAHEDHVGGFPEI 105 >gi|295104812|emb|CBL02356.1| conserved hypothetical protein [Faecalibacterium prausnitzii SL3/3] Length = 609 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + +IVD G F + + I +L TH H DHI I Sbjct: 80 ECNGDMIIVDCGLVFPDSEMFGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGSIP--- 136 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +L QK + VY + L++ + I K Sbjct: 137 --YLLQKISLPVYGTRLTCGLIKNK-------LEEFGLAGKTKFVEIVPRQ-----KIKL 182 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA 182 G PI H ++ F + A Sbjct: 183 GCFTVEPIHVNHSIPDAVAFAIDSPA 208 >gi|268323698|emb|CBH37286.1| conserved hypothetical protein, RNA-metabolising metallo-beta-lactamase family [uncultured archaeon] Length = 628 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 11/72 (15%) Query: 52 SNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 T +++D G + + + +IDAV+ TH H DH L Sbjct: 202 PETRILIDCGVSVGSEGMPYLYVPEVTPISNIDAVVITHAHLDHSG----LVPLLYLYGY 257 Query: 105 PIDVYAAPDCMK 116 +Y Sbjct: 258 DGPIYITQPTRD 269 >gi|228986186|ref|ZP_04146328.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228773567|gb|EEM21991.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 281 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 12/76 (15%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V + +N V++D G P +++ R A++ TH H DH+ GI L Sbjct: 37 ICFVGQPHTNDFVLIDAGMPKCANEIISVTEKRFGTNSRPKAIILTHGHFDHVGGIIELI 96 Query: 97 GYFLKQKRPIDVYAAP 112 Y+ + VYA Sbjct: 97 KYW-----DVPVYAHQ 107 >gi|157151449|ref|YP_001450718.1| metallo-beta-lactamase superfamily protein 4 [Streptococcus gordonii str. Challis substr. CH1] gi|157076243|gb|ABV10926.1| metallo-beta-lactamase superfamily protein 4 [Streptococcus gordonii str. Challis substr. CH1] Length = 211 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 10/61 (16%) Query: 56 VIVDTGPDFYMQVLREQVLSI----DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++VD G +F Q +++++ I A+L TH H DHI +D + VY A Sbjct: 25 ILVDPGSNF--QAIQKKITEIGKPISAILLTHTHYDHIMSLD----LVRESFGYPPVYVA 78 Query: 112 P 112 Sbjct: 79 E 79 >gi|118444608|ref|YP_877919.1| metallo-beta-lactamase family protein [Clostridium novyi NT] gi|118135064|gb|ABK62108.1| metallo-beta-lactamase family protein [Clostridium novyi NT] Length = 199 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 33/156 (21%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDA-------VLYTHPHADHIHG 91 + I N I+D G D +L + +IDA +L TH H DH G Sbjct: 14 NCYILI------DGNEGCIIDPGGD--ADML---IRNIDALNIDVKFILLTHGHMDHTGG 62 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + L+ + + VY + ++ L F + E+ + Sbjct: 63 VQELKD-----RYNVPVYINENDLE-LMRKHSQVFGP---------IWNETEEDKTIKDG 107 Query: 152 MKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 G +E + + F +V + D Sbjct: 108 DVLKLGNLEIKCLETPGHTPGGMSFVVKDVVFTGDT 143 >gi|46360445|gb|AAS80153.1| ACT11D09.9 [Cucumis melo] Length = 708 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 15/77 (19%) Query: 52 SNTTVIVDTG-----------PDF-YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + ++ D G PDF + R+ ++ ++ TH H DHI + Sbjct: 56 NGKRIMFDCGMHLGYVDHRRYPDFSRISASRDYNNTLSCIIITHFHLDHIGALPYFTEIC 115 Query: 100 LKQKRPIDVYAAPDCMK 116 +Y M Sbjct: 116 GYNG---PIYMTYPTMA 129 >gi|107028435|ref|YP_625530.1| beta-lactamase-like [Burkholderia cenocepacia AU 1054] gi|116686430|ref|YP_839677.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia HI2424] gi|105897599|gb|ABF80557.1| beta-lactamase-like protein [Burkholderia cenocepacia AU 1054] gi|116652145|gb|ABK12784.1| beta-lactamase domain protein [Burkholderia cenocepacia HI2424] Length = 281 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 10/64 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGP--------DFYMQVLREQVL--SIDAVLYTHPHADH 88 S++ I+ RG+ TV++D G + + +ID VL TH H DH Sbjct: 51 PSAVHINCYVVRGAGRTVLIDAGAGGIKQWGGRLMDNLRLAGIEPAAIDTVLLTHAHPDH 110 Query: 89 IHGI 92 + G+ Sbjct: 111 VGGL 114 >gi|326665775|ref|XP_003198113.1| PREDICTED: LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 2 [Danio rerio] Length = 895 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 27/94 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P R S ++ S + ++++D G + Sbjct: 553 EIVFLGTGSSL----------------PMKIRNVSGTLVNISSSQ----SLLLDCGEGTF 592 Query: 66 MQVLR-------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E + + + +H HADH G+ Sbjct: 593 SQMCRHYGDDVDEMLSKLSTIFVSHLHADHHTGL 626 >gi|261368409|ref|ZP_05981292.1| ribonuclease Z [Subdoligranulum variabile DSM 15176] gi|282569550|gb|EFB75085.1| ribonuclease Z [Subdoligranulum variabile DSM 15176] Length = 101 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 23/90 (25%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 T+LGCG + +P R +S ++ V++D G Sbjct: 2 LTVTLLGCGGTQPLP----------------HR-----ALSALTVSVGGAAVLLDCGEGT 40 Query: 65 YMQVLREQVL--SIDAVLYTHPHADHIHGI 92 + R V + +L TH H DHI G+ Sbjct: 41 QTALRRWGVSAYRLTHILLTHYHGDHILGL 70 >gi|269976490|ref|ZP_06183475.1| ribonuclease J [Mobiluncus mulieris 28-1] gi|307701733|ref|ZP_07638747.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16] gi|269935291|gb|EEZ91840.1| ribonuclease J [Mobiluncus mulieris 28-1] gi|307612991|gb|EFN92246.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16] Length = 564 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 36/140 (25%) Query: 52 SNTTVIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F ++ ++ ++ + ++ TH H DHI + Y Sbjct: 40 EGKILIIDCGVLFPEEIQPGVDLILPDFSYIKGRINQVVGMVLTHGHEDHIGAV----PY 95 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA--- 155 LK + I VY + + P + + ++ + + Sbjct: 96 LLKHRSDIPVYGSGLTLA----------------LVEPKLQEHRLPVTNLRVKTEGQRLD 139 Query: 156 GGVIEAIPILQQHGRISSLG 175 G H +L Sbjct: 140 LGPFHLEFCAVNHSIPDALA 159 >gi|184155092|ref|YP_001843432.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum IFO 3956] gi|183226436|dbj|BAG26952.1| metallo-beta-lactamase superfamily protein [Lactobacillus fermentum IFO 3956] Length = 599 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 20/124 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L++ I V TH HAD I + YFL + + VY + + Sbjct: 55 LQDHADQIKGVFLTHGHADAIGAL----PYFLADFK-VPVYGSQLTIALAK------LAV 103 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 +++ + V+ G + H +LG G++ Y Sbjct: 104 KENKQVKKFNDFHVVNE-----TKTIKFGNVTIGFFTTTHIIPDTLGIDVQTPEGSIVYT 158 Query: 185 TDVN 188 D Sbjct: 159 GDFK 162 >gi|126737336|ref|ZP_01753071.1| beta-lactamase-like protein [Roseobacter sp. SK209-2-6] gi|126721921|gb|EBA18624.1| beta-lactamase-like protein [Roseobacter sp. SK209-2-6] Length = 326 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Query: 42 LKISRVSERGSNTTVIVDTGP-DFYMQV----LREQVLSIDAVLYTHPHADHIHGIDGLR 96 I G+ ++ D GP DF ++ L I+A+ +H H DH GI Sbjct: 59 ALIITAQRGGTKHVMLFDAGPVDFAVEYNASRLGASFGEIEAITLSHGHWDHAGGIPAAI 118 Query: 97 GYFL--KQKRPIDVYAAP 112 Q + VY P Sbjct: 119 DLIRQGGQTGDLPVYLHP 136 >gi|49900316|gb|AAH76482.1| Im:7145112 protein [Danio rerio] Length = 864 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 27/94 (28%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 LG G+SL P R S ++ S + ++++D G + Sbjct: 522 EIVFLGTGSSL----------------PMKIRNVSGTLVNISSSQ----SLLLDCGEGTF 561 Query: 66 MQVLR-------EQVLSIDAVLYTHPHADHIHGI 92 Q+ R E + + + +H HADH G+ Sbjct: 562 SQMCRHYGDDVDEMLSKLSTIFVSHLHADHHTGL 595 >gi|18977777|ref|NP_579134.1| cleavage and polyadenylation specifity factor protein [Pyrococcus furiosus DSM 3638] gi|18893520|gb|AAL81529.1| cleavage and polyadenylation specifity factor protein [Pyrococcus furiosus DSM 3638] Length = 651 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 66/203 (32%), Gaps = 46/203 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG------------------PDFYMQVLREQVLSIDAVL 80 RS+L + + V+VD G P+F VL+E + +DA++ Sbjct: 202 RSALLVQT-----DESFVLVDFGINVAALNDPYKAFPHFDAPEFQY-VLKEGL--LDAIV 253 Query: 81 YTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNP 140 TH H DH + L Y L +Y P + + + P+ P Sbjct: 254 ITHAHLDHSGMLPYLFRYNLFDG---PIYTTPPTRDLMVLLQKDFVEIQQSNGQEPLYKP 310 Query: 141 IVIENNDVPICMKSAGGVIEAIPILQQ---HGRISSLGFRF---------GNVAYCTDVN 188 I+ + + G + I + H LG N+A D Sbjct: 311 KDIKEV-IKHTITLDYGEVRDISPDVRLTLHNAGHILGSAIVHLHIGNGLHNIAVTGDFK 369 Query: 189 AFPAESLEKLQ----NLDFLIID 207 P LE L+ L+++ Sbjct: 370 FIPTRLLEPASYRFPRLETLVME 392 >gi|21226797|ref|NP_632719.1| cleavage and polyadenylation specificity factor 100 kD subunit [Methanosarcina mazei Go1] gi|20905093|gb|AAM30391.1| cleavage and polyadenylation specificity factor 100 kD subunit [Methanosarcina mazei Go1] Length = 637 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFY--MQVLR-------EQVLSIDAVLYTHPHADHI 89 RS +S R +++D G + + + IDAV+ TH H DH Sbjct: 194 RSCFLLSTPESR-----ILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQ 248 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMK 116 L K VY P Sbjct: 249 G----LVPLLFKYGYEGPVYCTPPTRD 271 >gi|315174003|gb|EFU18020.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX1346] Length = 709 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 28/193 (14%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAKANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT---HM 240 D+ A E + L L ID LK G H S S ++ + I+ +NP+ A+++ + Sbjct: 605 TGDLEAEGEEQV--LARYPQLTIDILKVGHHGSKTSSTK--RFIKQLNPREALISAGLNN 660 Query: 241 HVDLDYDMVLKST 253 + L + Sbjct: 661 RFKHPHQETLATL 673 >gi|300697519|ref|YP_003748180.1| exonuclease/RNA metabolizing enzyme, metallo-beta-lactamase family [Ralstonia solanacearum CFBP2957] gi|299074243|emb|CBJ53788.1| exonuclease/RNA metabolizing enzyme, metallo-beta-lactamase family [Ralstonia solanacearum CFBP2957] Length = 452 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 23/75 (30%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG--PDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 V+VD G F LR IDAVL TH H DH ++ Sbjct: 20 EAGGRQVMVDCGLFQGFKSLRLRNWDKLPVNPHHIDAVLLTHAHIDHSG----YLPLLVR 75 Query: 102 QKRPIDVYAAPDCMK 116 VY + Sbjct: 76 NGFRGPVYCTRGTAE 90 >gi|227550364|ref|ZP_03980413.1| metallo-beta-lactamase [Enterococcus faecium TX1330] gi|257897229|ref|ZP_05676882.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] gi|227180503|gb|EEI61475.1| metallo-beta-lactamase [Enterococcus faecium TX1330] gi|257833794|gb|EEV60215.1| metallo-beta-lactamase superfamily protein [Enterococcus faecium Com12] Length = 559 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + A++ TH H DHI GI +L + Sbjct: 35 ILIDAGIKFPEDDLLGIDYVIPDYSYIIQNLHKVKALVITHGHEDHIGGIP-----YLLK 89 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +YA P + + LD+ E +++ Sbjct: 90 QVNIPIYAGPLALALITNK-------LDEHGL-----LREAELHEINEDTIIRFRKTSVS 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H +LG GN+ D Sbjct: 138 FFRTTHSIPDALGIVVKTPSGNIVATGDFK 167 >gi|49475643|ref|YP_033684.1| hypothetical protein BH08800 [Bartonella henselae str. Houston-1] gi|49238450|emb|CAF27678.1| hypothetical protein BH08800 [Bartonella henselae str. Houston-1] Length = 558 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 35/138 (25%), Gaps = 34/138 (24%) Query: 47 VSERGSNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 + ++VD G PD L + ++ ++ TH H DH Sbjct: 29 FGPQNLREWLLVDMGVSFAGPELPGADLILPDIR--FLENEKHNVRGLVLTHAHEDHYGA 86 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 + L K + +Y P L + + I N + Sbjct: 87 VLDLWP-----KLKVPLYCTPFTAGLL------------ESKRQSDFDSHQISLNIFQVG 129 Query: 152 MKSAGGVIEAIPILQQHG 169 G I H Sbjct: 130 DCFQAGPFAVEAIAVNHS 147 >gi|159111399|ref|XP_001705931.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] gi|157434022|gb|EDO78257.1| Cleavage and polyadenylation specificity factor, 73 kDa subunit [Giardia lamblia ATCC 50803] Length = 757 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 62/200 (31%), Gaps = 35/200 (17%) Query: 41 SLKISRVSERGSNTTVIVDTG-----PDFYM----QVLREQ-----VLSIDAVLYTHPHA 86 S I G + ++++D G + Q L V ++ +L TH H Sbjct: 43 SCFILSYQRSGCSGSIMLDCGLHPALSETRDYVAIQALPFFDLEDYVSTLSLILITHFHN 102 Query: 87 DHIHGID----GLRGYFLKQKRP-----IDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 DHI + LR +K+ +P VY +K ES T+ + Sbjct: 103 DHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPTLKIFKESVTDVISQTKLYTHEDV 162 Query: 138 VNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGF--RFGNV--AYCTDVNAFPA- 192 I + H I + F N Y D + P Sbjct: 163 EFMAKNTKLLTSFYQTERVNGISFTAMPAGH-VIGAAMFHISIDNFHALYTGDFSCEPED 221 Query: 193 -----ESLEKLQNLDFLIID 207 + +++ LD LII+ Sbjct: 222 RHLQPATFPQVK-LDLLIIE 240 >gi|297626615|ref|YP_003688378.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922380|emb|CBL56952.1| Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 561 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 17/78 (21%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++VD G F L ++ + ++ TH H DHI G+ Y Sbjct: 38 NGKILLVDCGVLFPEDNQPGVDLILPGLDYLEGRLGDVVGLVLTHGHEDHIGGV----PY 93 Query: 99 FLKQKRPIDVYAAPDCMK 116 L+ + I +Y + + Sbjct: 94 LLRMREDIPIYGSKLTLA 111 >gi|291547069|emb|CBL20177.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Ruminococcus sp. SR1/5] Length = 139 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 50/154 (32%), Gaps = 36/154 (23%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP-- 62 T+LG G +L V +VD G Sbjct: 1 MKLTMLGTGNAL-VTECYNTC---------------------FVLSDEYGHFLVDGGGGN 38 Query: 63 DFYMQVLREQVLSID--AVLYTHPHADHIHGID-GLRGYFLKQKRPI-----DVYAAPDC 114 Q+ + V +D + TH H DHI GI +R K+ ++YA + Sbjct: 39 TVLSQLKKAGVDLMDVHEIFVTHKHVDHIMGIVWVIRIICQNMKKGTYQGEANIYAHDEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVN-PIVIENND 147 + L + FK L+ + I + +IE D Sbjct: 99 IGLLKDM---AFKLLNKKETQYIGDRLHLIEVKD 129 >gi|62321637|dbj|BAD95244.1| hypothetical protein [Arabidopsis thaliana] Length = 350 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 28/98 (28%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 ILG G+S P R S++ I S ++++D G Q+ Sbjct: 2 ILGTGSSQ----------------PSKYRNVSAIFIDLFS----RGSLLLDCGEGTLGQL 41 Query: 69 LR--------EQVLSIDAVLYTHPHADHIHGIDGLRGY 98 R E V + + +H HADH G+ + Sbjct: 42 KRRYGLDGADEAVRKLRCIWISHIHADHHTGLARILAL 79 >gi|30250269|ref|NP_842339.1| metallo-beta-lactamase superfamily protein [Nitrosomonas europaea ATCC 19718] gi|30181064|emb|CAD86254.1| Metallo-beta-lactamase superfamily [Nitrosomonas europaea ATCC 19718] Length = 333 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 34/228 (14%) Query: 32 NPKNRR-TRSSLKISRVSERGSNTTVIVDTGPDFY----MQVLREQ---VLSIDAVLYTH 83 + + R R+++ + ++ + +VDTG F M L + ID + TH Sbjct: 25 DARYHRPGRAAIHLITEGDKAA----LVDTGTRFSVPGTMAALAHKQITPEQIDYIFLTH 80 Query: 84 PHADHIHGIDGLRGYFLKQKRPI----------DVYAAPDCMKHLFESFRYCFKALDDRT 133 H DH G + + + + M ES F+ + Sbjct: 81 IHLDHAGGASEFMKWLPNARLVVHPRGASHMANPIKLIAGVMAVYGES---EFRRIYGEI 137 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAE 193 +P I+ ++ + + + P +H R ++ + D Sbjct: 138 HPIAAERIIEAPDNTLVELNGRPLRLLDTPGHARHHYCIHDA-RSKSI-FTGDTFGVSYR 195 Query: 194 SLEKLQNLDFLIIDA--LKNGLHSSHFSLSESLKKIELINPKNAILTH 239 + + L+F+ ++ ++H S+ + ++P+ A LTH Sbjct: 196 EFD-MDGLEFVFPTTSPVQFDPEAAHASIDRLMA----LHPEQAFLTH 238 >gi|330879890|gb|EGH14039.1| metallo-beta-lactamase superfamily protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 200 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 49/186 (26%) Query: 80 LYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVN 139 + TH HADH+HG+ L ++ + VY + ++ + + P+ Sbjct: 1 MVTHEHADHVHGVGLLS-----RRYNVPVYLSSGTLRGMRK---------------PVEV 40 Query: 140 PIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVNAFPAESL 195 ++ + G ++ + H + F F + TD+ ++ + L Sbjct: 41 AGLLAGGE-----SLQIGALDIDVVSVAHDALEPTQFVFSDGSRRFGLLTDLGSYCSNVL 95 Query: 196 EKLQNLDFLIIDA------LKNGLHS-----------SHFSLSESLKKIELIN---PKNA 235 ++ Q LD L+I+A L G + H + ++ + + ++ Sbjct: 96 QRYQGLDALMIEANHCRDMLARGQYPVFLKQRVGCETGHLNNHQAASLVSELGWQDLQHL 155 Query: 236 ILTHMH 241 +L H+ Sbjct: 156 VLAHLS 161 >gi|327492224|gb|AEA86245.1| hydrolase-like protein [Clostridium phage CP26F] Length = 354 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 68 VLREQVLSIDAVLYTHPHADHIHGI 92 ++R + ID V TH H+DHI GI Sbjct: 74 LIRNNINKIDKVFITHYHSDHIEGI 98 >gi|320103332|ref|YP_004178923.1| beta-lactamase superfamily hydrolase [Isosphaera pallida ATCC 43644] gi|319750614|gb|ADV62374.1| beta-lactamase superfamily hydrolase [Isosphaera pallida ATCC 43644] Length = 309 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 31/167 (18%) Query: 56 VIVDTG--PDFYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA 110 +++D G P Q L I AV+ TH HADH H + +R + ++ Sbjct: 26 LLIDAGLGPRILEQRLEHLGVPPERIAAVVLTHLHADHFH----PQTLAWMNRRNVTLHL 81 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + L D + + ++ P + + I H Sbjct: 82 HESQVDRL-------VGHPDFESLARAGRVLSFDSRPWPTPL-----GLTIEAIDLTHDA 129 Query: 171 ISSLGFRFGN----------VAYCTDVNAFPAESLEKLQNLDFLIID 207 ++ GFR + TD A+ E L +D L I+ Sbjct: 130 ETTHGFRLEGRPTRCEAPVALGLATDTGAWTPALAEALAQVDLLAIE 176 >gi|299752177|ref|XP_001830756.2| mRNA 3'-end-processing protein YSH1 [Coprinopsis cinerea okayama7#130] gi|298409712|gb|EAU91125.2| mRNA 3'-end-processing protein YSH1 [Coprinopsis cinerea okayama7#130] Length = 846 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 27/181 (14%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC---MKHLFESFRYCFKALD 130 ++DA+L TH H DH + + + VY K + + F + Sbjct: 57 STVDAILVTHFHLDHAAALTYITEKTNFRDGKGKVYMTHPTKAVHKFMMQDFARMSSSTS 116 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGV---IEAIPILQQHGRISSLGFRFG----NVAY 183 D + P ++ + + +P+ V + P H + + F + Y Sbjct: 117 DALFSP-LDMQMSLASIIPVSAHQLINVCPGVSFTPYHAGH-VLGACMFLIDIAGLKILY 174 Query: 184 CTDVNAFPA-----ESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT 238 D + L ++ D LI+++ G+H +L+ E + L Sbjct: 175 TGDYSREEDRHLVKAELPPIR-PDVLIVEST-YGVH--------TLEGREEKEARFTTLV 224 Query: 239 H 239 H Sbjct: 225 H 225 >gi|283797888|ref|ZP_06347041.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|291074577|gb|EFE11941.1| metallo-beta-lactamase family protein [Clostridium sp. M62/1] gi|295116118|emb|CBL36965.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [butyrate-producing bacterium SM4/1] Length = 535 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 9/69 (13%) Query: 53 NTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +++D G + + Q L ID VL TH H DH+ + + + Sbjct: 23 GLNILIDCGMEQGSNKYQNQELPVSYADIDYVLVTHSHIDHVG----MLPFIFARGFSGQ 78 Query: 108 VYAAPDCMK 116 + A+ Sbjct: 79 IMASRATCD 87 >gi|217966933|ref|YP_002352439.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] gi|217336032|gb|ACK41825.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724] Length = 262 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 56/157 (35%), Gaps = 34/157 (21%) Query: 41 SLKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGI---- 92 S+ I R E ++ DTG +VL + + ++ ++ +H H DH G+ Sbjct: 28 SVLIEREGESP----ILFDTGSSDVFIKNAEVLGKDLSKVENIIISHGHYDHAGGLKYLS 83 Query: 93 --DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 FL+++ + Y+ F +D + + ++++ D + Sbjct: 84 KSHRRFRIFLREEAFLPKYSDER------------FTGVDWESLKSFLEFVIVK--DEVL 129 Query: 151 CMKSAGGVIEAIPI------LQQHGRISSLGFRFGNV 181 + + + ++P H + G + + Sbjct: 130 KISDSIYIFGSVPFQNDFEEPDPHFYVVKEGRKLRDF 166 >gi|163816056|ref|ZP_02207426.1| hypothetical protein COPEUT_02236 [Coprococcus eutactus ATCC 27759] gi|158448866|gb|EDP25861.1| hypothetical protein COPEUT_02236 [Coprococcus eutactus ATCC 27759] Length = 286 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 74/261 (28%), Gaps = 53/261 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 T+LG G++L V + +VD G Sbjct: 19 GCMDITMLGTGSAL-VTECYNTC---------------------FVMSDGDEHFLVDGGG 56 Query: 63 D--FYMQVLREQVLSID--AVLYTHPHADHIHG-IDGLRGYFLKQKR-----PIDVYAAP 112 Q+ + D + TH H DHI G + +R K+ +Y Sbjct: 57 GNGILSQLKKAGFNWQDMRTIFVTHKHVDHILGAVWMIRMICQHMKKGSYEGEAVIYGHD 116 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + L E + T ++E ND + + Sbjct: 117 EVIALLREMAMQLLNKKE--TVYIGDRLHLVEVNDGD---TKEIMDRKVTFFDTGSTKTK 171 Query: 173 SLGFR--FGNVAYCTDVNAFP--AESLEKLQNLDFLIIDAL----------KNGLHSSHF 218 GF G+ A T P + + +L+ +A H H Sbjct: 172 QFGFCMDMGDGAKITCCGDEPYNDCEEKYARGSKWLLHEAFCLYSETDIFDPYEKH--HS 229 Query: 219 SLSESLKKIELINPKNAILTH 239 ++ ++ + E + +N +L H Sbjct: 230 TVKDACELAEKLEVQNLLLYH 250 >gi|153854688|ref|ZP_01995938.1| hypothetical protein DORLON_01936 [Dorea longicatena DSM 13814] gi|149752792|gb|EDM62723.1| hypothetical protein DORLON_01936 [Dorea longicatena DSM 13814] Length = 535 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%) Query: 53 NTTVIVDTG----PDFYM-QVLREQVLSIDAVLYTHPHADHIHGI 92 +++D G PD Y Q L +D +L TH H DH I Sbjct: 23 GKNILIDCGMEQGPDLYENQELPVTPGEVDYILLTHAHIDHSGNI 67 >gi|29832035|ref|NP_826669.1| hypothetical protein SAV_5492 [Streptomyces avermitilis MA-4680] gi|29609153|dbj|BAC73204.1| putative membrane protein [Streptomyces avermitilis MA-4680] Length = 840 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VD GPD + L V I V+ TH HADH+ G+ Sbjct: 660 GDGTGVVVDAGPDPALVDRCLSALGVDRIPLVVLTHFHADHVAGL 704 >gi|24379737|ref|NP_721692.1| hydrolase [Streptococcus mutans UA159] gi|24377698|gb|AAN58998.1|AE014966_8 conserved hypothetical protein; possible hydrolase [Streptococcus mutans UA159] Length = 212 Score = 44.0 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Query: 52 SNTTVIVDTG---PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 +++D G D Q L+E I A+L TH H DHI +D + V Sbjct: 21 EEAVLLIDPGSNGDDILAQ-LKEINKPIAAILLTHTHYDHIMSLD----LVRQHFNYPPV 75 Query: 109 YAAPD 113 Y + Sbjct: 76 YVSEK 80 >gi|313500058|gb|ADR61424.1| Beta-lactamase domain protein [Pseudomonas putida BIRD-1] Length = 480 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 21/136 (15%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +SL + E+GS D P L + I A++ TH H DH+ I L Sbjct: 31 TSLLVDCGLEQGS------DAPPGAESAPLGFDIQGIQALVITHVHLDHVGRIPALLAAG 84 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 + + + + L +K E V ++ +I Sbjct: 85 YRG----PILCSEPSARLLPLVLEDAYKLSISS-----------EPAQVARYLEFIRDLI 129 Query: 160 EAIPILQQHGRISSLG 175 +P Q H + G Sbjct: 130 VPLPFEQWHTVVECPG 145 >gi|302671160|ref|YP_003831120.1| DNA internalization-related competence protein ComEC [Butyrivibrio proteoclasticus B316] gi|302395633|gb|ADL34538.1| DNA internalization-related competence protein ComEC [Butyrivibrio proteoclasticus B316] Length = 777 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 24/206 (11%) Query: 50 RGSNTTVIVDTGPDFYM-----QVLRE----QVLSIDAVLYTHPHADHIHGI----DGLR 96 V++D G Q++ + S+DA++ TH DH+ GI D + Sbjct: 517 SSGGRNVLIDGGSTSKKNVGKYQIIPFLKYKGIGSLDAIVLTHEDEDHLSGIMDILDDME 576 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + K+ I P+ + + + + P+ E + Sbjct: 577 KGGIYVKKLI----LPEVNETCRGDNYHRLENRAEELKIPVFYINTGERFRIGKTEFLCI 632 Query: 157 GVIEAIPILQQHGRISSLGFRFGNV-AYCT-DVNAFPAESLEKL--QNLDFL-IIDALKN 211 + + + + L + GN A T D ++++++ N D ID LK Sbjct: 633 NPELNMKVEGANAYSTVLFMKHGNFTALLTGDCEQEGQDNIKRVIHNNPDIFNNIDLLKV 692 Query: 212 GLHSSHFSLSESLKKIELINPKNAIL 237 H S ++ + +E+I P+ A++ Sbjct: 693 AHHGSKYTTDT--EFLEMIKPRIALI 716 >gi|291532887|emb|CBL06000.1| Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Megamonas hypermegale ART12/1] Length = 537 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTGP--------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++ V++D G D R ID VL TH H DH L K Sbjct: 20 EANDHKVLIDCGMFQGARNLRDLNYNDFRFVPSDIDCVLLTHAHVDHCG----LIPKLCK 75 Query: 102 QKRPIDVYAAPDCMK 116 Q D+YA Sbjct: 76 QGFKGDIYATKATCD 90 >gi|289163887|ref|YP_003454025.1| hypothetical protein LLO_0542 [Legionella longbeachae NSW150] gi|288857060|emb|CBJ10875.1| putative conserved hypothetical protein [Legionella longbeachae NSW150] Length = 286 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 30/109 (27%) Query: 22 TGDWGACDPTNPKNRRTRSSLK--ISRVSERGSNTTVIVDTGPDFY-------------- 65 G C+ KN R + I + + ++ DTG Sbjct: 14 AGFCKHCERMTLKNGRLKQCEYPAICALIKHPKQGYILFDTGYSNRFYELTQKFPFSLYR 73 Query: 66 ------------MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 Q+ + + I A++ +H HADHI G++ Sbjct: 74 RLTPVTLKKSLKQQLEEKNIQASEIKAIVISHFHADHIGGLNDFPNAQF 122 >gi|227551306|ref|ZP_03981355.1| hydroxyacylglutathione hydrolase [Enterococcus faecium TX1330] gi|227179586|gb|EEI60558.1| hydroxyacylglutathione hydrolase [Enterococcus faecium TX1330] Length = 221 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 12/134 (8%) Query: 56 VIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPD 113 +I+D G D Q +++ A+L TH H DHI ++ LR Y+ I VY +P Sbjct: 38 LIIDPGEDAEQIKQEIKKTNQQPVAILLTHTHYDHIGAVEPLRAYY-----QIPVYVSPL 92 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA-GGVIEAIPILQQHGRIS 172 K L + L + I++ + MK+ G + + I Sbjct: 93 EQKWLGD----PILNLSGLGRHDDIADIIVSPAEYEFEMKTYTLGNMSFRVVPTPGHSIG 148 Query: 173 SLGFRFGNVAYCTD 186 S+ F F + D Sbjct: 149 SVSFIFDDFVVSGD 162 >gi|225387597|ref|ZP_03757361.1| hypothetical protein CLOSTASPAR_01362 [Clostridium asparagiforme DSM 15981] gi|225046309|gb|EEG56555.1| hypothetical protein CLOSTASPAR_01362 [Clostridium asparagiforme DSM 15981] Length = 461 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 59/195 (30%), Gaps = 44/195 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG---------PDFYMQVLREQVLSIDAVLYTHPHADHI 89 R+ + N V++D G Y + RE + AV +H H DH+ Sbjct: 34 RNCFLLEA-----GNHAVLLDCGVRREALGALDHVYPALTREIAGRLTAVFLSHAHEDHV 88 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 + Y + +VY + + + + K +D P +E Sbjct: 89 AAL----PYLYELGYRGNVYGTEET---IRLAGGFMKKWVDFVAAAGGRLPFSVETMKRV 141 Query: 150 ICMKSAGGVIEAIPILQQHGR----ISSLGFRFG----NVAYCTDV--------NAFPAE 193 + G + GR + S RF ++ Y D+ P E Sbjct: 142 AFSAISLGSQVVEGLSVTAGRSGHMLGSCWLRFEYGGKSLLYTGDMTLAGRLLATDLPPE 201 Query: 194 SLEKLQNLDFLIIDA 208 S D ++D Sbjct: 202 S-------DGAVVDC 209 >gi|15615225|ref|NP_243528.1| hypothetical protein BH2662 [Bacillus halodurans C-125] gi|10175283|dbj|BAB06381.1| BH2662 [Bacillus halodurans C-125] Length = 555 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYSYLVKNENKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I +Y + L L++ I+ +D+ +K A + Sbjct: 89 EVNIPIYGGKLALGLLR-------GKLEEHGLLRKAKLHDIQEDDI---IKFAKTSVSF- 137 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 138 -FRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|320352440|ref|YP_004193779.1| hypothetical protein Despr_0304 [Desulfobulbus propionicus DSM 2032] gi|320120942|gb|ADW16488.1| hypothetical protein Despr_0304 [Desulfobulbus propionicus DSM 2032] Length = 307 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 17/137 (12%) Query: 53 NTTVIVDTGPDFYMQ---VLREQVLS--IDA-VLYTHPHADHIHGIDGLRGYFLKQKRPI 106 N VI+D G +L + I + +H H DHI G ++ I Sbjct: 38 NRHVIIDAGSGIRDLANFMLANDLPKGPISTEIYLSHTHWDHIMGFPFFVPVYIP-GTRI 96 Query: 107 DVYA-----APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 V+ + +Y + ++ + ++ M G I Sbjct: 97 KVFGPVTYEDEPLEAVVGGQMKYRYFPVNMGELASSIEYQRLKEEP----MIDLGDGITL 152 Query: 162 IPILQQHGRISSLGFRF 178 + H I++LG+RF Sbjct: 153 STAIINH-PITTLGYRF 168 >gi|296242984|ref|YP_003650471.1| KH-domain/beta-lactamase-domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296095568|gb|ADG91519.1| KH-domain/beta-lactamase-domain protein [Thermosphaera aggregans DSM 11486] Length = 651 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 31/172 (18%) Query: 39 RSSLKISRVSER-----GSNTTVIVDTGPDF-YMQVLREQVLSIDAVLYTHPHADHIHGI 92 RSS+ + R G NT V+ D F Y+ V ++ +D V+ TH H DH+ Sbjct: 201 RSSILVETRESRLLLDMGINTGVMDDPFKAFPYIDVDSLKLEELDGVIVTHSHLDHVG-- 258 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT-YPP---------IVNPIV 142 L K +Y + + + + Y P I++ I Sbjct: 259 --LVPILYKYGYRGPLYVTKPTRELMIVMLKDLIEVSRRSGRYLPFTEKDLTTMILHTIT 316 Query: 143 IENNDVPICMKSA------GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 +E ++V G I I+ H +G N+ Y D Sbjct: 317 VEYDEVTDVAPDIKLTMYNAGHILGSAIVHLH-----VGMGLHNIVYTGDFK 363 >gi|297545604|ref|YP_003677906.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843379|gb|ADH61895.1| beta-lactamase domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 317 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 16/199 (8%) Query: 45 SRVSERGSNTTVIVDTG-PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGLRGYF 99 S + S T+++D G + +V+ + ID ++ THPH DHI GI + F Sbjct: 68 SMFIQTSSGKTMLIDAGTHEMGSKVVNYIKSRGINKIDILIGTHPHNDHIGGIVEVLKTF 127 Query: 100 LKQKRPID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 K I V + + ++ L + +VI+ D I A Sbjct: 128 KIGKFYIPKVTTTTRTFEEVLKA-----AKLKGLSINVAKAGVVIDLGDGVIAKMLAPNS 182 Query: 159 IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + + +GN ++ +A E L D L D LK G H S Sbjct: 183 SHYEDLNNYSAVVKIT---YGNTSFLFTGDAGEQSEKEMLSKGDNLKADVLKIGHHGS-- 237 Query: 219 SLSESLKKIELINPKNAIL 237 S + + + ++ ++PK A++ Sbjct: 238 SSASTWEFLKAVHPKYAVI 256 >gi|255030427|ref|ZP_05302378.1| hypothetical protein LmonL_17426 [Listeria monocytogenes LO28] Length = 313 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|194214840|ref|XP_001493950.2| PREDICTED: similar to Beta-lactamase-like protein 2 [Equus caballus] Length = 358 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGPD-------FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 109 GPRRILIDTGEPAVPEYISCLKQALTEFNTAIQEIIVTHWHRDHTGGIRDI 159 >gi|182418175|ref|ZP_02949475.1| metallo-beta-lactamase domain protein [Clostridium butyricum 5521] gi|237666282|ref|ZP_04526269.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377993|gb|EDT75533.1| metallo-beta-lactamase domain protein [Clostridium butyricum 5521] gi|237658372|gb|EEP55925.1| beta-lactamase domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 594 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 52 SNTTVIVDTGP-DFYMQVLRE----------QVLSIDAVLYTHPHADHIHGIDGLRGYFL 100 + T ++DTG Q++ ID V+ TH H+DHI G+ + Sbjct: 320 NGETALIDTGDVTTREQLVNFLNEQKLRKKGGKKLIDYVIITHGHSDHIGGLAAVLD-NF 378 Query: 101 KQKRPIDVYAAPD 113 + + +Y + Sbjct: 379 EVGK---IYMPKN 388 >gi|154253650|ref|YP_001414474.1| beta-lactamase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157600|gb|ABS64817.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 567 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 17/108 (15%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 E+ + ++ TH H DHI + + + VYA P + +A Sbjct: 76 ERKKDLLGIVLTHAHEDHIGAVAHIWP-----RLRCPVYATPFTAAMVR---GKLIEAGI 127 Query: 131 DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + P + +P+ + A G + + H + G Sbjct: 128 ENEVP---------MHIIPLGHRFALGPFDIELVTLTHSILEPNGLAI 166 >gi|170735032|ref|YP_001774146.1| beta-lactamase domain-containing protein [Burkholderia cenocepacia MC0-3] gi|169821070|gb|ACA95651.1| beta-lactamase domain protein [Burkholderia cenocepacia MC0-3] Length = 281 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQ---VLREQVL-------SIDAVLYTHPHADH 88 S++ I+ RG+ TV++D G Q L + + +ID VL TH H DH Sbjct: 51 PSAVHINCYVVRGAGRTVLIDAGAGGIKQWGGRLMDNLRLAGVEPAAIDTVLLTHAHPDH 110 Query: 89 IHGI 92 + G+ Sbjct: 111 VGGL 114 >gi|86747583|ref|YP_484079.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gi|86570611|gb|ABD05168.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 308 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 26/168 (15%) Query: 31 TNPKNRRTRSSLKISRVSERGSNTTVIVDT-GPDFYMQVLREQVLSIDAVLYTHPHADHI 89 ++P RR + + VD D +Q R+ L+ID VL TH HADH+ Sbjct: 34 SDPATRR----AAVIDPVLDYDHRDGSVDVRSADAILQAARDDGLTIDWVLETHAHADHL 89 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVP 149 G ++ K I + + +K + FR F A D RT + +D Sbjct: 90 SGAPYIKA---KTGARIGI---GEHIKDVQRIFRPMFNADDLRT----------DGSDFD 133 Query: 150 ICM-KSAGGVIEAIPILQQH--GRISS-LGFRFGNVA-YCTDVNAFPA 192 I +P+ H G + + +R G+ A + D P Sbjct: 134 HLFKDGERFSIGDLPVEVLHTPGHTPADIAYRIGDDAVFVGDTLFMPD 181 >gi|148262349|ref|YP_001229055.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146395849|gb|ABQ24482.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 306 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Query: 44 ISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHG 91 IS R + T+++D GP ++ R+ + +D VL TH H DH G Sbjct: 23 ISSWLYRDNGFTLLIDPGPLSTIPRLCTELRRQGIERLDYVLLTHIHIDHAGG 75 >gi|319790032|ref|YP_004151665.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] gi|317114534|gb|ADU97024.1| RNA-metabolising metallo-beta-lactamase [Thermovibrio ammonificans HB-1] Length = 419 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 11/74 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 + ++VD G F + +L+ +DA++ TH H DH + L + Sbjct: 24 NGVNIVVDAGIRFSKENPYPDFDLLKALAPKLDAIVVTHAHVDHCGAVHLLSELY----P 79 Query: 105 PIDVYAAPDCMKHL 118 +YA + + L Sbjct: 80 DTPIYATFETAQLL 93 >gi|229019482|ref|ZP_04176303.1| Metallo-beta-lactamase [Bacillus cereus AH1273] gi|228741837|gb|EEL92016.1| Metallo-beta-lactamase [Bacillus cereus AH1273] Length = 221 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E L AVL TH H DHI +D +R F Sbjct: 28 YILTNNQNECIIFDPGHEGEKLVTYLQEAQLKPLAVLLTHAHFDHIGAVDAVRDAF---- 83 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 84 -RIPVYVHKE 92 >gi|218532797|ref|YP_002423613.1| beta-lactamase [Methylobacterium chloromethanicum CM4] gi|254563815|ref|YP_003070910.1| hydrolase of beta-lactamase superfamily [Methylobacterium extorquens DM4] gi|218525100|gb|ACK85685.1| beta-lactamase domain protein [Methylobacterium chloromethanicum CM4] gi|254271093|emb|CAX27100.1| Putative hydrolase of beta-lactamase superfamily [Methylobacterium extorquens DM4] Length = 301 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 52/170 (30%), Gaps = 13/170 (7%) Query: 50 RGSNTTVIVDTGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 R ++D G F ID +L++H H DH G+ + L R I Sbjct: 43 RCGERLFVIDAGSGLGAFGRNCCESLPQDID-LLFSHLHLDHTAGLPFFKPAVLDGARTI 101 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQ 166 Y ++ F ++ + + I IL Sbjct: 102 HTYCGNLDGASAEDALGRLFSPPLFPVTLDVLPCSFAHHGFRAGEPLTFADGIRVDTILL 161 Query: 167 QHGRISSLGFRFG----NVAYCTD----VNAFPAESLEKLQNLDFLIIDA 208 H + S G+RF + +D VN + ++ D L+ D Sbjct: 162 DHPQ-GSTGYRFDHGGKRLCIISDIEHGVNWPDPDLCRFVEGADLLVYDG 210 >gi|167746627|ref|ZP_02418754.1| hypothetical protein ANACAC_01338 [Anaerostipes caccae DSM 14662] gi|317471455|ref|ZP_07930807.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|167653587|gb|EDR97716.1| hypothetical protein ANACAC_01338 [Anaerostipes caccae DSM 14662] gi|316901070|gb|EFV23032.1| metallo-beta-lactamase superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 214 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 47 VSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 R + ++ D G + Y M++L ++ L + AVL TH H DH+ + Y +QK Sbjct: 22 AGNRQTKEALVFDPGDEGYRVMEMLEKEGLELTAVLLTHGHFDHVMAL----PYLQEQKP 77 Query: 105 PIDVYAAPDCMKHLFE 120 + VY D L E Sbjct: 78 GLPVYLHEDEEDVLRE 93 >gi|160943991|ref|ZP_02091221.1| hypothetical protein FAEPRAM212_01492 [Faecalibacterium prausnitzii M21/2] gi|158444667|gb|EDP21671.1| hypothetical protein FAEPRAM212_01492 [Faecalibacterium prausnitzii M21/2] Length = 609 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 42/146 (28%), Gaps = 30/146 (20%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + +IVD G F + + I +L TH H DHI I Sbjct: 80 ECNGDMIIVDCGLVFPDSEMFGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGSIP--- 136 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 +L QK + VY + L++ + I K Sbjct: 137 --YLLQKISLPVYGTRLTCGLIKNK-------LEEFGLAGKTKFVEIVPRQ-----KIKL 182 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVA 182 G PI H ++ F + A Sbjct: 183 GCFTVEPIHVNHSIPDAVAFAIDSPA 208 >gi|20129357|ref|NP_609183.1| CG12375 [Drosophila melanogaster] gi|74869792|sp|Q9VLS9|LACB2_DROME RecName: Full=Beta-lactamase-like protein 2 homolog gi|7297345|gb|AAF52605.1| CG12375 [Drosophila melanogaster] gi|220944196|gb|ACL84641.1| CG12375-PA [synthetic construct] gi|220954142|gb|ACL89614.1| CG12375-PA [synthetic construct] Length = 292 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGI 92 + +++DTG + Q VL+++ SID +L TH H DH+ G+ Sbjct: 38 GSRRILIDTGDEDVPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGV 85 >gi|325068433|ref|ZP_08127106.1| beta-lactamase domain protein [Actinomyces oris K20] Length = 561 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 35/133 (26%) Query: 52 SNTTVIVDTG---------------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 +IVD G PDF + ++ + A++ TH H DHI G+ Sbjct: 39 DGKLLIVDCGVLFPEEDQPGVDLILPDFSS--IEHRIDDVVALVLTHGHEDHIGGV---- 92 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L+ + I + + + + L + P++ VIE+ +V Sbjct: 93 PYLLRLREDIPLVGSELTLAFVE-------AKLKEHRIRPVLR-QVIEHEEVSY------ 138 Query: 157 GVIEAIPILQQHG 169 G + + H Sbjct: 139 GPFDLEFVAVNHS 151 >gi|308198432|pdb|2XR1|A Chain A, Dimeric Archaeal Cleavage And Polyadenylation Specificity Factor With N-Terminal Kh Domains (Kh-Cpsf) From Methanosarcina Mazei gi|308198433|pdb|2XR1|B Chain B, Dimeric Archaeal Cleavage And Polyadenylation Specificity Factor With N-Terminal Kh Domains (Kh-Cpsf) From Methanosarcina Mazei Length = 640 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFY--MQVLR-------EQVLSIDAVLYTHPHADHI 89 RS +S R +++D G + + + IDAV+ TH H DH Sbjct: 197 RSCFLLSTPESR-----ILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQ 251 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMK 116 L K VY P Sbjct: 252 G----LVPLLFKYGYEGPVYCTPPTRD 274 >gi|296166466|ref|ZP_06848898.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898227|gb|EFG77801.1| metallo-beta-lactamase superfamily protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 212 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 63/195 (32%), Gaps = 26/195 (13%) Query: 45 SRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 S + +T V+ D G + E + + A+L TH H DH+ G G L+ Sbjct: 9 SCLLAEFDHTRVLFDPGTFSHG---FEGITGLSAILITHQHPDHVDG--GRLPALLEANP 63 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +YA P L + + R I V + VIE I Sbjct: 64 DAPLYADPQTTAQLGAPCQAVHVGEELR----IGELTVRAVGGKHAVIHPEIPVIENISF 119 Query: 165 LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESL 224 L G + G+ + D + +D L A +SE++ Sbjct: 120 LVGDGDHRARLMHPGDALFVPD------------EPVDVLATPAAAPW-----MKISEAV 162 Query: 225 KKIELINPKNAILTH 239 + + P A+ H Sbjct: 163 DYLRAVAPARAVPIH 177 >gi|239991192|ref|ZP_04711856.1| metallo-beta-lactamase family hydrolase [Streptomyces roseosporus NRRL 11379] Length = 561 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 23/149 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ Y L+ K I + + + + K Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PYLLRLKPDIPLIGSKLTLALIEA------KL 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFGNV 181 + R P + + + + V +IP I G + G F+ + Sbjct: 120 QEHRIRPYTLEVQEGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQL 179 Query: 182 ---AYCTDVNAFPAESLEKLQNLDFLIID 207 TD++AF S E +D L+ D Sbjct: 180 PLDGRLTDLHAFARLSEE---GIDLLLSD 205 >gi|239944728|ref|ZP_04696665.1| metallo-beta-lactamase family hydrolase [Streptomyces roseosporus NRRL 15998] gi|291448186|ref|ZP_06587576.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351133|gb|EFE78037.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 561 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 23/149 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ Y L+ K I + + + + K Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PYLLRLKPDIPLIGSKLTLALIEA------KL 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFGNV 181 + R P + + + + V +IP I G + G F+ + Sbjct: 120 QEHRIRPYTLEVQEGQRERIGVFDCEFIAVNHSIPDALVVAIRTPAGMAVATGDFKMDQL 179 Query: 182 ---AYCTDVNAFPAESLEKLQNLDFLIID 207 TD++AF S E +D L+ D Sbjct: 180 PLDGRLTDLHAFARLSEE---GIDLLLSD 205 >gi|257070012|ref|YP_003156267.1| putative hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] gi|256560830|gb|ACU86677.1| predicted hydrolase of the metallo-beta-lactamase superfamily [Brachybacterium faecium DSM 4810] Length = 561 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 +R+++ I+ ++ TH H DHI G+ Y LK++ I + + + + Sbjct: 70 IRDRLDDIECIVLTHGHEDHIGGV----PYLLKERADIPLIGSELTLAFI 115 >gi|215261121|pdb|2ZDW|A Chain A, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261122|pdb|2ZDW|B Chain B, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261123|pdb|2ZDW|C Chain C, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|215261124|pdb|2ZDW|D Chain D, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311752|pdb|3A4Y|A Chain A, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311753|pdb|3A4Y|B Chain B, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311754|pdb|3A4Y|C Chain C, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 gi|255311755|pdb|3A4Y|D Chain D, Crystal Structure Of H61a Mutant Ttha0252 From Thermus Thermophilus Hb8 Length = 431 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 35/201 (17%) Query: 52 SNTTVIVDTG-----PDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 V++D G + +DAVL TH DH+ + L ++ Sbjct: 22 GGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAALDHVGRLPKL----FREGYR 77 Query: 106 IDVYAAPDC-------MKHLFESFRYCFKALDD-RTYPPIVNPIVIENNDVPICMKSAGG 157 VYA ++ + F +D + P+ + A G Sbjct: 78 GPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFG 137 Query: 158 VIEAIP---ILQQHGRISSLGFRFGNVAYCTDV-----NAFPAESLEKLQNLDFLIIDAL 209 +P + G +L Y D+ + P SL L +L L Sbjct: 138 QAGHLPGSAFVVAQGEGRTL-------VYSGDLGNREKDVLPDPSLPPLADL-VLAEGTY 189 Query: 210 KNGLHSSHF-SLSESLKKIEL 229 + H + ++ E L+ +E Sbjct: 190 GDRPHRPYRETVREFLEILEK 210 >gi|182435568|ref|YP_001823287.1| metallo-beta-lactamase family hydrolase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776202|ref|ZP_08235467.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] gi|178464084|dbj|BAG18604.1| putative hydrolase of the metallo-beta-lactamase superfamily [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656535|gb|EGE41381.1| beta-lactamase domain protein [Streptomyces cf. griseus XylebKG-1] Length = 561 Score = 44.0 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 23/149 (15%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ Y L+ K I + + + + K Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PYLLRLKPDIPLIGSKLTLALIEA------KL 119 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP------ILQQHGRISSLG-FRFGNV 181 + R P + + + + V +IP I G + G F+ + Sbjct: 120 QEHRIRPYTLEVQEGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQL 179 Query: 182 ---AYCTDVNAFPAESLEKLQNLDFLIID 207 TD++AF S E +D L+ D Sbjct: 180 PLDGRLTDLHAFARLSEE---GIDLLLSD 205 >gi|311108616|ref|YP_003981469.1| metallo-beta-lactamase [Achromobacter xylosoxidans A8] gi|310763305|gb|ADP18754.1| metallo-beta-lactamase superfamily protein 9 [Achromobacter xylosoxidans A8] Length = 452 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 ++T +++D G + Q L IDAV+ TH H DH + L K Sbjct: 21 SHADTRLLIDCGLFQGLKNLRELNWQSLPLSPADIDAVVLTHAHLDHCGYLPRLVAEGFK 80 Query: 102 QKRPIDVYAAPDCMK 116 K ++A P Sbjct: 81 GK----IHATPATRD 91 >gi|291618865|ref|YP_003521607.1| Hypothetical Protein PANA_3312 [Pantoea ananatis LMG 20103] gi|291153895|gb|ADD78479.1| Hypothetical Protein PANA_3312 [Pantoea ananatis LMG 20103] Length = 349 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 +DA+ TH H DH +D + VYA + L E Sbjct: 34 GHVDAICLTHSHGDHTGALDSWQAL-----GSPPVYATELTWQQLGE 75 >gi|289644572|ref|ZP_06476642.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] gi|289505611|gb|EFD26640.1| beta-lactamase domain protein [Frankia symbiont of Datisca glomerata] Length = 561 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 PDF +R+++ +I+AV+ TH H DHI I Y L+++ I + + + Sbjct: 65 PDF--TAIRDRLDAIEAVVLTHAHEDHIGAI----PYLLRERADIPLVGSRLTLA 113 >gi|189426509|ref|YP_001953686.1| beta-lactamase [Geobacter lovleyi SZ] gi|189422768|gb|ACD97166.1| beta-lactamase domain protein [Geobacter lovleyi SZ] Length = 276 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 15/103 (14%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM----QVLREQVLSIDAVLYTHPHADHIHGIDGL- 95 S I ++ DTG F + Q + + + + V +H H DH G+ L Sbjct: 26 SALIE-----WDGGALLWDTGQGFTLLHNAQRMNKNLHGLQQVALSHGHYDHSGGLLPLL 80 Query: 96 -----RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 + F Y D + L Y + L+ + Sbjct: 81 RACGPKQVFGHPGIFTPRYRHKDTGESLSLGMPYPKEYLEGQG 123 >gi|14520337|ref|NP_125812.1| hypothetical protein PAB2269 [Pyrococcus abyssi GE5] gi|24212634|sp|Q9V2F5|Y119_PYRAB RecName: Full=UPF0173 protein PYRAB01190 gi|5457552|emb|CAB49043.1| Metallo-beta-lactamase superfamily protein [Pyrococcus abyssi GE5] Length = 210 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 39/189 (20%) Query: 53 NTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAP 112 ++++D PD +++ +D +L TH H DH + A Sbjct: 17 GVSILIDPYPDVDE----DRMEKVDYILITHEHMDHYG--------------KTPLIAKL 58 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + + + Y ++ + + ++ + G + +H Sbjct: 59 NDAEVI----------GPKTVYLMAISDGLTKVREIEAGQEIQLGDVTVKAFYTEHPTSQ 108 Query: 173 S-LGFRF---GNVAYCTDVNAFPAESLEKLQN-LDFLIIDALKNGLHSSHFSLSESLKKI 227 LG+ VA+ D P S + L+ +D L L S S E++ + Sbjct: 109 YPLGYLIIGDKRVAHLGDTYYSP--SFKNLRGQVDIL----LVPIGGRSTASEREAVDIV 162 Query: 228 ELINPKNAI 236 ++I P+ A+ Sbjct: 163 DIIRPRIAV 171 >gi|315649130|ref|ZP_07902222.1| putative S-layer protein [Paenibacillus vortex V453] gi|315275476|gb|EFU38832.1| putative S-layer protein [Paenibacillus vortex V453] Length = 292 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 35/210 (16%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM----QVLRE-QVLSIDAVLYTHPHADHIHGIDGL 95 S I N +++D G + + L V ++DAV+ THP ADHI G+D + Sbjct: 53 STLIRTP----ENQYILIDAGNNNQGNNVVKYLNHLGVNTLDAVVATHPDADHIGGLDDV 108 Query: 96 -RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + +K VYA + H ++++ A+ ++ + I+ + + Sbjct: 109 IKSINVK-----SVYAPK--VSHTTDTYKDFLLAVKNKG-------LTIKQAKKDVTIPL 154 Query: 155 AGGVIEAIPILQQHGR-------ISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIID 207 G + + ++G + LG++ + + D +E+ + L N L D Sbjct: 155 MGVTATFLAPVNEYGSDLNKWSAVLRLGYKNNSFLFTGDA-DIKSET-DMLINKSILKAD 212 Query: 208 ALKNGLHSSHFSLSESLKKIELINPKNAIL 237 LK G H S S S+ K I+ + P+ AI+ Sbjct: 213 VLKVGSHGSISSSSK--KFIDAVKPRYAII 240 >gi|229129540|ref|ZP_04258511.1| Metallo-beta-lactamase [Bacillus cereus BDRD-Cer4] gi|229152461|ref|ZP_04280653.1| Metallo-beta-lactamase [Bacillus cereus m1550] gi|228631069|gb|EEK87706.1| Metallo-beta-lactamase [Bacillus cereus m1550] gi|228654145|gb|EEL10012.1| Metallo-beta-lactamase [Bacillus cereus BDRD-Cer4] Length = 239 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 50 NDQKECIIFDPGHEGEKLVTYLQEKQLKPLAVLLTHAHFDHIGAVDAVRDAFH-----IP 104 Query: 108 VYAAPD 113 VY + Sbjct: 105 VYVHKE 110 >gi|308233973|ref|ZP_07664710.1| RNA-metabolising metallo-beta-lactamase [Atopobium vaginae DSM 15829] gi|328944018|ref|ZP_08241483.1| metallo-beta-lactamase [Atopobium vaginae DSM 15829] gi|327491987|gb|EGF23761.1| metallo-beta-lactamase [Atopobium vaginae DSM 15829] Length = 552 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 72/229 (31%), Gaps = 55/229 (24%) Query: 50 RGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + +++D G F + E + +L TH H DHI I L Sbjct: 27 ECGDDLIVIDCGLMFPDDNQPGIDLVLPDYTYILEHADKLRGILITHGHEDHIGAIPYLL 86 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 R + +Y++ + + K + + P + +V + Sbjct: 87 A---DLHRKVPIYSSKLSLGFINA------KLAEHKVVSPKL-------CEVKNGDRIQL 130 Query: 157 GVIEAIPILQQHGRISSLGFRF----GNVAYCTDVNAFPAESLEKL------------QN 200 G E H +LG G+ + D F ++ + + Sbjct: 131 GSFEVNFFSITHSIPGALGMYVKTSAGSFLHTGDFK-FDQTPIDGVTTNFNAICRFAEEG 189 Query: 201 LDFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT-----HMH 241 +D L+ D A + G S S+ SL+ I N K + H+H Sbjct: 190 IDVLLADSTNATRPGFTPSESSVGPSLRHIIK-NAKGRVFVASFSSHIH 237 >gi|226322618|ref|ZP_03798136.1| hypothetical protein COPCOM_00390 [Coprococcus comes ATCC 27758] gi|225208955|gb|EEG91309.1| hypothetical protein COPCOM_00390 [Coprococcus comes ATCC 27758] Length = 268 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 79/267 (29%), Gaps = 60/267 (22%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDF 64 TILG G + V + N +VDTG Sbjct: 1 MKLTILGTGNAT-VTECYNTC---------------------FALSDGNRHFLVDTGGGN 38 Query: 65 Y-MQVLRE---QVLSIDAVLYTHPHADHIHG-------IDGLRGYFLKQKRPIDVYAAPD 113 ++VL++ Q+ I + TH H DH+ G I + K + + +Y + Sbjct: 39 RILKVLKDTGIQLEDIHDIFITHEHIDHLLGVIWLIRMIGQKKIGQGKYEGNLRIYCHEE 98 Query: 114 CMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISS 173 + + + + + ++ + + + + + Sbjct: 99 LARSIR----MIAELTIQKKVTKYFDDRILFLCRCITERQRKSLAVRSPFSIFFSTKAKQ 154 Query: 174 LGFRFGNVAYCTDVNAFP--------AESLEKLQNLD-------FLIIDALKNGLHSSHF 218 GF D F + E ++ D L +A K + H Sbjct: 155 FGFTML----LPDGVKFTCCGDEPYNEKDYEFVKGSDWLTHEAFCLYGEADKFKPYEKHH 210 Query: 219 S-LSESLKKIELINPKNAILTH---MH 241 S + E+ + E + + IL H MH Sbjct: 211 STVKEACQLAEELQIPHLILYHTEEMH 237 >gi|254492430|ref|ZP_05105602.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga thiooxidans DMS010] gi|224462322|gb|EEF78599.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga thiooxydans DMS010] Length = 458 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 17/112 (15%) Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCF 126 Q + ++ +D ++ TH H DHI + +L ++ +Y + L Sbjct: 65 QFITDRKDQLDGLIITHAHEDHIGAVP-----YLWERFQCPIYTTAYTAEILR------- 112 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF 178 + L + V V++ + + GV + H G Sbjct: 113 RKLQEAGLTEKVPVHVVDAD-----TELDVGVFHLQWVRLTHSIPEPFGLVI 159 >gi|167766091|ref|ZP_02438144.1| hypothetical protein CLOSS21_00584 [Clostridium sp. SS2/1] gi|167712171|gb|EDS22750.1| hypothetical protein CLOSS21_00584 [Clostridium sp. SS2/1] gi|291560039|emb|CBL38839.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [butyrate-producing bacterium SSC/2] Length = 267 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 77/266 (28%), Gaps = 69/266 (25%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD-- 63 +LG G + I C ++G +VD G Sbjct: 3 RLIVLGTGNAQ---AIHCY-NTC-----------------YAMQKGEE-YFLVDAGGGNG 40 Query: 64 FYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLKQ----------KRPIDVYAA 111 Q+ + + SI + TH H DHI G+ + ++ + +Y Sbjct: 41 ILSQLDKAGIPLESIHNIFVTHAHNDHILGM----VWMIRMIATSMNKGTYDGTLTIYCH 96 Query: 112 PDCMKHLF--------ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIP 163 + + + + F F + I I + + + Sbjct: 97 EELVHTIKTLTKLTVGKKFYKHFDERIVFHVIAHGDTIQILGDSFTFFDIGSTKEKQFGF 156 Query: 164 ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDAL----------KNGL 213 G R V++ D + + +++ D+L+ +A Sbjct: 157 TSVM-----ENGLR---VSFPGD-EPYRESLYDFVKDSDWLLHEAFCVYGERDIFKPYEK 207 Query: 214 HSSHFSLSESLKKIELINPKNAILTH 239 H H ++ ++ + E + N +L H Sbjct: 208 H--HSTVKDACELAEHLKIPNLVLWH 231 >gi|91775735|ref|YP_545491.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] gi|91709722|gb|ABE49650.1| beta-lactamase-like protein [Methylobacillus flagellatus KT] Length = 455 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 12/72 (16%) Query: 52 SNTTVIVDTGPDFYMQVLREQ--------VLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 N V+VD G ++VLR + +IDAV+ TH H DH ++Q Sbjct: 22 GNRRVLVDCGLFQGLKVLRLKNWARFPIDPATIDAVVLTHAHIDHTG----YLPLLVRQG 77 Query: 104 RPIDVYAAPDCM 115 VY + + Sbjct: 78 FRGKVYCSEVTL 89 >gi|148264505|ref|YP_001231211.1| beta-lactamase domain-containing protein [Geobacter uraniireducens Rf4] gi|146398005|gb|ABQ26638.1| beta-lactamase domain protein [Geobacter uraniireducens Rf4] Length = 421 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 64/230 (27%), Gaps = 47/230 (20%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSN--TTVIVDT 60 D T G PRI S+ + + D Sbjct: 55 DEMRITFCGT---WYTPRINQACN--------------SIYVEVGGGENGKPLDQFVFDC 97 Query: 61 GPDFYMQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFLK--QKRPIDVYAAP---- 112 G + + V +D V TH H DH+ + + + +K ++V+ Sbjct: 98 GSGVVAKYVALGVPYSRMDKVFLTHLHGDHMSDLTTIYCFGPASDRKSALNVWGPSGDTK 157 Query: 113 ------DCMKHL------FESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIE 160 C K L ESF + + + P G ++ Sbjct: 158 NEGTWFFCKKLLEMAKWHRESFSFLPTGYKGDGDGYDLKVKELRYMKNPGIAYHKNG-VK 216 Query: 161 AIPILQQHGRISSLGFRFG----NVAYCTDVNAFPAE-SLEKLQNLDFLI 205 H R S+ ++ ++ + D P LE Q +D LI Sbjct: 217 ISHFPAIHARDGSISYKLEWNGISMVFTGDTK--PNNYVLEHAQGVDILI 264 >gi|49185906|ref|YP_029158.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|65320372|ref|ZP_00393331.1| COG0491: Zn-dependent hydrolases, including glyoxylases [Bacillus anthracis str. A2012] gi|165868835|ref|ZP_02213495.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167631957|ref|ZP_02390284.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|167637443|ref|ZP_02395723.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|170684812|ref|ZP_02876037.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|170704974|ref|ZP_02895439.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|177650098|ref|ZP_02933099.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190564690|ref|ZP_03017611.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227814085|ref|YP_002814094.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229602953|ref|YP_002867336.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] gi|254685655|ref|ZP_05149514.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CNEVA-9066] gi|254723066|ref|ZP_05184854.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A1055] gi|254738120|ref|ZP_05195823.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Western North America USA6153] gi|254742708|ref|ZP_05200393.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Kruger B] gi|254752436|ref|ZP_05204472.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Vollum] gi|254760954|ref|ZP_05212978.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Australia 94] gi|49179833|gb|AAT55209.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Sterne] gi|164715561|gb|EDR21078.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0488] gi|167514950|gb|EDR90316.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0193] gi|167532255|gb|EDR94891.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0442] gi|170129829|gb|EDS98691.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0389] gi|170671072|gb|EDT21810.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0465] gi|172084050|gb|EDT69109.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0174] gi|190564007|gb|EDV17971.1| metallo-beta-lactamase family protein [Bacillus anthracis Tsiankovskii-I] gi|227004530|gb|ACP14273.1| metallo-beta-lactamase family protein [Bacillus anthracis str. CDC 684] gi|229267361|gb|ACQ48998.1| metallo-beta-lactamase family protein [Bacillus anthracis str. A0248] Length = 285 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 19/142 (13%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V SN V+VD G P +++ R A++ TH H DH+ GI L Sbjct: 41 ICFVGNPESNDFVLVDAGMPKCANEIISVAKDRFGTNSRPKAIILTHGHFDHVGGIIELI 100 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y+ + VYA + L Y D +V + + PI + G Sbjct: 101 KYW-----DVPVYAHQMEIPFLTGQQSY--PKPDPTVEGGMVAKMSPLFPNEPIDL---G 150 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 I+ +P + GFR+ Sbjct: 151 NSIKVLPTDGTVPHVP--GFRW 170 >gi|330813999|ref|YP_004358238.1| metallo-beta-lactamase family protein, RNA-specific [Candidatus Pelagibacter sp. IMCC9063] gi|327487094|gb|AEA81499.1| metallo-beta-lactamase family protein, RNA-specific [Candidatus Pelagibacter sp. IMCC9063] Length = 556 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 26/91 (28%) Query: 48 SERGSNTTVIVDTG-----------------PDFYMQVLREQVLSIDAVLYTHPHADHIH 90 + +++D G PDF +Q + + +L TH H DHI Sbjct: 29 GSQDEKKWIMIDIGVGFTDDSVPGIDLMVADPDFVVQ----RKKDLLGILLTHAHEDHIG 84 Query: 91 GIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 I L +YA P + E Sbjct: 85 AIAHLWPLL-----ECPIYATPFTASLIKEK 110 >gi|325283533|ref|YP_004256074.1| beta-lactamase domain-containing protein [Deinococcus proteolyticus MRP] gi|324315342|gb|ADY26457.1| beta-lactamase domain protein [Deinococcus proteolyticus MRP] Length = 555 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 34/193 (17%) Query: 65 YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 M L + I TH H DHI G+ Y + + I +Y + + E FR Sbjct: 62 RMDYLLQNAGLIRGWYLTHGHEDHIGGL----PYLVARLPKIPIYGGALTLGLVREKFRE 117 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFR----FGN 180 D V+ +E D + G + H + G+ G Sbjct: 118 FGIKDSD------VDFREVEAGD----RLNIGRHFQLDVFRMTHSIPDNTGYVLKTPVGQ 167 Query: 181 VAYCTDVNAFPAE-------SLEKLQ-----NLDFLIID---ALKNGLHSSHFSLSESLK 225 V + D E L +L+ + L+ D A + G S ++ +L+ Sbjct: 168 VVHTGDFK-LDEEPGDGKLSDLARLKQAGDEGVLLLLSDSTNAERPGRTPSEAEIARNLE 226 Query: 226 KIELINPKNAILT 238 ++ LT Sbjct: 227 EVIAGCRGRVFLT 239 >gi|227509443|ref|ZP_03939492.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191155|gb|EEI71222.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 578 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 24/132 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF L E I V TH HAD I I F + V+ + ++ Sbjct: 51 PDF--SYLEENKDRIVGVFLTHGHADAIGAISYFLSEF-----DVPVFGSEMTVELAK-- 101 Query: 122 FRYCFKALDDRTYPPIVNPIVI-ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF-- 178 D + ++ E +++ ++ H SLG Sbjct: 102 ----LNVADSEELSGFDDFHIVSERSEIDFD------DVKVTFFKTTHSIPGSLGIALHT 151 Query: 179 --GNVAYCTDVN 188 G + Y D Sbjct: 152 SDGAIVYTGDFK 163 >gi|324327061|gb|ADY22321.1| metal-dependent hydrolase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 285 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 12/76 (15%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V +N ++VD G P +++ R A++ TH H DH+ GI L Sbjct: 41 ICFVGHPHTNDFILVDAGMPKCANEIISVTEKRFGTNSRPKAIILTHGHFDHVGGIIELI 100 Query: 97 GYFLKQKRPIDVYAAP 112 Y+ I VYA Sbjct: 101 KYW-----DIPVYAHQ 111 >gi|257891255|ref|ZP_05670908.1| metal dependent hydrolase [Enterococcus faecium 1,231,410] gi|260560573|ref|ZP_05832738.1| predicted protein [Enterococcus faecium C68] gi|261209383|ref|ZP_05923760.1| predicted protein [Enterococcus faecium TC 6] gi|314994937|ref|ZP_07860060.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] gi|257827615|gb|EEV54241.1| metal dependent hydrolase [Enterococcus faecium 1,231,410] gi|260073372|gb|EEW61709.1| predicted protein [Enterococcus faecium C68] gi|260076665|gb|EEW64415.1| predicted protein [Enterococcus faecium TC 6] gi|313590819|gb|EFR69664.1| metallo-beta-lactamase domain protein [Enterococcus faecium TX0133a01] Length = 280 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 43/215 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM----QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 SL I+ + D G + + + E + ++AV+ +H H+DH G+ Sbjct: 29 SLLINYSG-----KKYLFDAGANKKLVYNATKMGETLNDLEAVIISHGHSDHTGGLR--- 80 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA- 155 +LK +Y A + + K L Y I +++ ++ +K+ Sbjct: 81 --YLKSGNA-PIYTAEGV------TLPHYLKILTTFLYVGIPKNEILKMHENLHTIKTKT 131 Query: 156 --GGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLII--DALK 210 IP+ + + +L + + Y + F E L ++ D LI+ Sbjct: 132 ELAPSFHIIPLGKANSTTKNLYKKMDDKFVY----DDFSDELLVVIEQEDGLIVFTGC-- 185 Query: 211 NGLHSSHFSLSESLKKIELINPKN--AILT---HM 240 SH + + ++ P L HM Sbjct: 186 -----SHHGIIDMMEIALETFPTKPIKYLIGGFHM 215 >gi|315230465|ref|YP_004070901.1| 7,8 dihydropteroate synthase (methanopterin) [Thermococcus barophilus MP] gi|315183493|gb|ADT83678.1| 7,8 dihydropteroate synthase (methanopterin) [Thermococcus barophilus MP] Length = 273 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 12/78 (15%) Query: 41 SLKISRVSERGSNTTVIVDTGPD----FY-MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S + ++VDTG D M+ L + ID + TH H DH G+ L Sbjct: 24 SALVEH-----KRYKILVDTGVDGEILLRNMEALGIKPADIDYLFLTHGHYDHTEGLKAL 78 Query: 96 RGYFLKQKRPIDVYAAPD 113 G ++ + + + A PD Sbjct: 79 LGA--RRGKKLTIIAHPD 94 >gi|195339092|ref|XP_002036155.1| GM13170 [Drosophila sechellia] gi|194130035|gb|EDW52078.1| GM13170 [Drosophila sechellia] Length = 292 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGI 92 + +++DTG + Q VL+++ SID +L TH H DH+ G+ Sbjct: 38 GSRRILIDTGDEDVPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGV 85 >gi|270157849|ref|ZP_06186506.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|269989874|gb|EEZ96128.1| conserved hypothetical protein [Legionella longbeachae D-4968] Length = 281 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 30/109 (27%) Query: 22 TGDWGACDPTNPKNRRTRSSLK--ISRVSERGSNTTVIVDTGPDFY-------------- 65 G C+ KN R + I + + ++ DTG Sbjct: 9 AGFCKHCERMTLKNGRLKQCEYPAICALIKHPKQGYILFDTGYSNRFYELTQKFPFSLYR 68 Query: 66 ------------MQVLREQVL--SIDAVLYTHPHADHIHGIDGLRGYFL 100 Q+ + + I A++ +H HADHI G++ Sbjct: 69 RLTPVTLKKSLKQQLEEKNIQASEIKAIVISHFHADHIGGLNDFPNAQF 117 >gi|262278094|ref|ZP_06055879.1| Zn-dependent hydrolase [Acinetobacter calcoaceticus RUH2202] gi|262258445|gb|EEY77178.1| Zn-dependent hydrolase [Acinetobacter calcoaceticus RUH2202] Length = 284 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 22/104 (21%) Query: 44 ISRVSERGSNTTVIVDTGPDFYMQ----VLRE------QVLSIDAVLYTHPHADHIHGID 93 I+ +G+ T++VD+G +LR ID +L TH H DHI G+ Sbjct: 56 INCYLIQGNGHTILVDSGTGGLNHAGGLLLRNLAQLGIAPCDIDTILITHAHPDHIGGLL 115 Query: 94 GLRGYFLKQKRPIDVYAAP----DCMKHLFESFRYCFKALDDRT 133 G VY ++ + Y F +R Sbjct: 116 DNEGK--------PVYENAKLYLHTLEVEYWQNDYAFAQATERG 151 >gi|290956327|ref|YP_003487509.1| hypothetical protein SCAB_18161 [Streptomyces scabiei 87.22] gi|260645853|emb|CBG68944.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 211 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 35/192 (18%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYA 110 + T+++D G F Q DAVL TH H DH D R + P +++ Sbjct: 16 AGRTLVIDPG-GFSEQDAAAGA---DAVLVTHEHPDHF---DEGRLRAALEGNPAAEIWT 68 Query: 111 APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGR 170 + + +F + + + H Sbjct: 69 LRSVAEKISAAFPGRVHTV---------------GHGDTFTAAGFDVQVHGELHAVIHPD 113 Query: 171 ISSLGFRFGNVAYCTDVNAF--PAESLE-KLQNLDFLIIDALKNGLHSSHFSLSESLKKI 227 I R NV Y D P ++L ++ L++ + +SE + + Sbjct: 114 IP----RITNVGYLVDAGRVFHPGDALTVPGHAVETLMLPVMAPWS-----KISEVIDYV 164 Query: 228 ELINPKNAILTH 239 + P A H Sbjct: 165 REVKPHRAYDIH 176 >gi|195577464|ref|XP_002078590.1| GD22440 [Drosophila simulans] gi|194190599|gb|EDX04175.1| GD22440 [Drosophila simulans] Length = 292 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 7/48 (14%) Query: 52 SNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGI 92 + +++DTG + Q VL+++ SID +L TH H DH+ G+ Sbjct: 38 GSRRILIDTGDEDVPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGV 85 >gi|229543853|ref|ZP_04432912.1| beta-lactamase domain protein [Bacillus coagulans 36D1] gi|229324992|gb|EEN90668.1| beta-lactamase domain protein [Bacillus coagulans 36D1] Length = 209 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 12/78 (15%) Query: 38 TRSSLKISRVSERGSNTTVIVDTGPDFY--MQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 T + +I D G +F+ + E L AVL TH H DHI +D + Sbjct: 13 TNCYIL-----WNDEKDCLIFDPGAEFHRLHAFIGENGLKPHAVLLTHAHFDHIGALDAV 67 Query: 96 RGYFLKQKRPIDVYAAPD 113 R + I Y Sbjct: 68 RDAY-----KIPAYVHQK 80 >gi|118586754|ref|ZP_01544191.1| metallo-beta-lactamase superfamily protein [Oenococcus oeni ATCC BAA-1163] gi|118432842|gb|EAV39571.1| metallo-beta-lactamase superfamily protein [Oenococcus oeni ATCC BAA-1163] Length = 573 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 32/186 (17%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L + + + A++ TH H DHI I + + + VYA P + + Sbjct: 73 LVQNIEKVKALVITHGHEDHIGAIS-----YFLRAVNVPVYAPPFALALIK-------GK 120 Query: 129 LDDRTYPPIVNPIVIENNDV---------PICMKSAGGVIEAIPILQQHGRISSLG-FRF 178 L++ I+ + + + + G I G F+F Sbjct: 121 LEEHNLLKKTELHEIKPDSFLDFGKLSVEFFQTTHSIPDTVGVAVHTPKGTIVETGDFKF 180 Query: 179 GNVAYCTDVNAFPA-ESLEKL--QNLDFLIID---ALKNGLHSSHFSLSESLKKI-ELIN 231 N +P + K+ + + L+ D A + S + +S+++I + I Sbjct: 181 DL---TPVTNQYPDMLKMAKIGREGVLLLMSDSTNAERPEFTKSEAWVQKSVERIFDRIT 237 Query: 232 PKNAIL 237 I Sbjct: 238 KGRIIF 243 >gi|13541761|ref|NP_111449.1| Zn-dependent hydrolase [Thermoplasma volcanium GSS1] gi|14325175|dbj|BAB60100.1| hypothetical protein [Thermoplasma volcanium GSS1] Length = 312 Score = 44.0 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 52 SNTTVIVDTGP--DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 +++DTG D Q+++E I AV TH H DH+ G + ++ + VY Sbjct: 28 DKGYILIDTGMSGDSVDQIVKES-NDIQAVFLTHLHIDHVGG-----ALRIHEELGVPVY 81 Query: 110 AAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 + + + A D Y + N VP+ M+ +I P++ + Sbjct: 82 MNSKDINLIRQ------VANDKEAYIKKY-VDIFRGNGVPLSMQE--DLIHMHPVINFYE 132 Query: 170 RISSLGF 176 S LGF Sbjct: 133 YYSKLGF 139 >gi|294791977|ref|ZP_06757125.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] gi|294457207|gb|EFG25569.1| metallo-beta-lactamase family protein [Veillonella sp. 6_1_27] Length = 303 Score = 44.0 bits (103), Expect = 0.026, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 27/229 (11%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 + + E T ++ + Q+ V + ++ THPHADH+ G F Sbjct: 60 ILLKVDDEYSMIDTGDIEHRENIVAQLKTMGVTKLKNIIITHPHADHMGG-------FYA 112 Query: 102 QKRPIDVYAAPDCMKH---LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 + + + + + ++ ++ + D Sbjct: 113 IAKAMPI---EHVYDDGIAVDNNMYKTYEKWIEKNKIQRTTLRSGDVVDFGHGAVFVVYA 169 Query: 159 IEAIPILQQHGRIS-----SLG-FRFGNVA--YCTDVNAFPAESLEKLQNLDFLIIDALK 210 P+ + G +G FG + + D + L K QN L LK Sbjct: 170 PWVEPLTDKKGETDLNNNSIVGKLIFGKFSMLFTGDAEWQEEKKLIKEQNSR-LFARILK 228 Query: 211 NGLHSSHFSLSESLKKIELINPKNAILTH-MH--VDLDYDMVLKSTPSR 256 G H S S SE ++ I P++A++++ M+ +D+ L+ Sbjct: 229 VGHHGSRTSSSE--DFLKSIKPESALISNGMYNKYGHPHDVTLRRLQEN 275 >gi|297199610|ref|ZP_06917007.1| integral membrane protein [Streptomyces sviceus ATCC 29083] gi|297147448|gb|EFH28634.1| integral membrane protein [Streptomyces sviceus ATCC 29083] Length = 622 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPD--FYMQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VD GPD LR + + V+ TH HADH+ G+ Sbjct: 567 GEATGVVVDAGPDPALVDGCLRTLGITKVPLVVLTHFHADHVAGL 611 >gi|229047979|ref|ZP_04193555.1| Metallo-beta-lactamase [Bacillus cereus AH676] gi|228723436|gb|EEL74805.1| Metallo-beta-lactamase [Bacillus cereus AH676] Length = 209 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 20 NDQKECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFY-----IP 74 Query: 108 VYAAPD 113 VY + Sbjct: 75 VYVHKE 80 >gi|229111734|ref|ZP_04241282.1| Metallo-beta-lactamase [Bacillus cereus Rock1-15] gi|228671728|gb|EEL27024.1| Metallo-beta-lactamase [Bacillus cereus Rock1-15] Length = 209 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 20 NDQKECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFY-----IP 74 Query: 108 VYAAPD 113 VY + Sbjct: 75 VYVHKE 80 >gi|195977429|ref|YP_002122673.1| metallo-beta-lactamase family protein, Zn-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225869242|ref|YP_002745190.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] gi|225869807|ref|YP_002745754.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|195974134|gb|ACG61660.1| metallo-beta-lactamase family protein, Zn-dependent hydrolase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699211|emb|CAW92483.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. equi 4047] gi|225702518|emb|CAX00454.1| metallo-beta-lactamase superfamily protein [Streptococcus equi subsp. zooepidemicus] Length = 560 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 10/112 (8%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDD 131 + + A++ TH H DHI GI FL ++ + +YA P + + D Sbjct: 65 NLERVKALVITHGHEDHIGGIP-----FLLKQANVPIYAGPLALALIRGKLEEHGLLRDA 119 Query: 132 RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFG 179 Y I + + + + I + H G++ G F+F Sbjct: 120 VLYE-INHNTELTFKHMSVTFFKTTHSIPEPLGIVIHTPQGKVICTGDFKFD 170 >gi|30263065|ref|NP_845442.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47528408|ref|YP_019757.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|30257698|gb|AAP26928.1| metallo-beta-lactamase family protein [Bacillus anthracis str. Ames] gi|47503556|gb|AAT32232.1| metallo-beta-lactamase family protein [Bacillus anthracis str. 'Ames Ancestor'] Length = 281 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 19/142 (13%) Query: 44 ISRVSERGSNTTVIVDTG-PDFYMQVL-----REQV-LSIDAVLYTHPHADHIHGIDGLR 96 I V SN V+VD G P +++ R A++ TH H DH+ GI L Sbjct: 37 ICFVGNPESNDFVLVDAGMPKCANEIISVAKDRFGTNSRPKAIILTHGHFDHVGGIIELI 96 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y+ + VYA + L Y D +V + + PI + G Sbjct: 97 KYW-----DVPVYAHQMEIPFLTGQQSY--PKPDPTVEGGMVAKMSPLFPNEPIDL---G 146 Query: 157 GVIEAIPILQQHGRISSLGFRF 178 I+ +P + GFR+ Sbjct: 147 NSIKVLPTDGTVPHVP--GFRW 166 >gi|302388535|ref|YP_003824357.1| conserved hypothetical membrane spanning protein [Clostridium saccharolyticum WM1] gi|302199163|gb|ADL06734.1| conserved hypothetical membrane spanning protein [Clostridium saccharolyticum WM1] Length = 360 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 14/74 (18%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYMQ-------VLREQVLSIDAVLYTHPHADHIHGID 93 S I + +++D G Q + ++ V ++D V+ THPH+DHI G++ Sbjct: 59 STLIEK-----DGHFMLIDAGE--RDQGETVASYLEKQGVKTLDYVIGTHPHSDHIGGME 111 Query: 94 GLRGYFLKQKRPID 107 + F QK + Sbjct: 112 TIIRKFEIQKVFLP 125 >gi|237734636|ref|ZP_04565117.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382456|gb|EEO32547.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 215 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V ++ +I+D G + L E L +AVL TH H DHI +D +L + Sbjct: 26 YVVSDENHHCLIIDPGANGKKVVHYLTENELVPEAVLLTHGHFDHIGAVD-----YLYEH 80 Query: 104 RPIDVYAAPDCMKHL 118 +Y D ++ L Sbjct: 81 YHCPIYLHQDDLEML 95 >gi|229014941|ref|ZP_04172029.1| hypothetical protein bmyco0001_53230 [Bacillus mycoides DSM 2048] gi|228746353|gb|EEL96268.1| hypothetical protein bmyco0001_53230 [Bacillus mycoides DSM 2048] Length = 461 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 30/199 (15%) Query: 52 SNTTVIVDTGPDFYMQVLRE-----QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 S T+++D G + +V+ +ID ++ THP ADH+ G+D + Y + K Sbjct: 230 SGETILIDAGNNGKGKVVANYLKGLGFNTIDYMIATHPDADHVGGLDEVL-YSINVKN-- 286 Query: 107 DVYAAPDCMKHLFESFRYCFKALDDRTY------PPIVNPIVIENNDVPICMKSAGGVIE 160 VYA + H ++++ A+ ++ + PI N+ +K G + Sbjct: 287 -VYAPK--VSHTTQTYKDFLTAVANKGLTIKEAKTGVTLPINGLNSQFLAPVKEYGDDLN 343 Query: 161 AIP--ILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 + HG + + D + + + L D LK G H S Sbjct: 344 EWSAVLKVTHGS--------KSFLFTGDAETKSEKDMVAAHGSN-LKSDVLKPGHHGSKT 394 Query: 219 SLSESLKKIELINPKNAIL 237 S S+ ++ + P A++ Sbjct: 395 SSSQ--PFLDAVKPSIAVI 411 >gi|156742955|ref|YP_001433084.1| beta-lactamase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156234283|gb|ABU59066.1| beta-lactamase domain protein [Roseiflexus castenholzii DSM 13941] Length = 301 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Query: 51 GSNTTVIVDTGPD-----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 G + VDTG D + L E L + A++ TH HADHI G D Y ++ Sbjct: 26 GDGGAIAVDTGLDKDTGRMLRRALEEAGLRLRAIISTHHHADHIGGND----YLVRNLPD 81 Query: 106 IDVYAA 111 + VYA Sbjct: 82 VAVYAP 87 >gi|33601322|ref|NP_888882.1| hypothetical protein BB2340 [Bordetella bronchiseptica RB50] gi|33575758|emb|CAE32835.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 452 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 R +T ++VD G + Q L IDAV+ TH H DH + L + Sbjct: 21 RHGDTRLLVDCGLFQGLKNLRELNWQPLPVAPADIDAVVLTHAHLDHCGYLPRLVAEGFR 80 Query: 102 QKRPIDVYAAPDCMK 116 + ++A P Sbjct: 81 GR----IHATPATRD 91 >gi|302807377|ref|XP_002985383.1| hypothetical protein SELMODRAFT_122306 [Selaginella moellendorffii] gi|300146846|gb|EFJ13513.1| hypothetical protein SELMODRAFT_122306 [Selaginella moellendorffii] Length = 718 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 28/98 (28%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D LG G +P R S + ERG +++D G Sbjct: 393 DDLEIVFLGTG----------------SMHPSKHR-NVSAIYLHLFERGG---MLLDCGE 432 Query: 63 DFYMQV-LREQVLSIDAVL-------YTHPHADHIHGI 92 Y Q+ R + D+VL +H HADH G+ Sbjct: 433 GTYGQLKRRYGIQGADSVLANLKCIWISHIHADHQSGL 470 >gi|238749768|ref|ZP_04611273.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380] gi|238712423|gb|EEQ04636.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380] Length = 720 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 11/75 (14%) Query: 52 SNTTVIVDTGPDFYMQ---------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFL-- 100 +I DTG + LR + ++I+ ++ +H H DH G+ L+ + Sbjct: 480 GGKAIIFDTGNRWATGSMASMVILPYLRWRGITIEQIILSHDHQDHTGGLSELQSVYPQA 539 Query: 101 KQKRPIDVYAAPDCM 115 + P V + + Sbjct: 540 TVRAPFPVKGVENVL 554 >gi|242774209|ref|XP_002478395.1| tRNA processing endoribonuclease Trz1, putative [Talaromyces stipitatus ATCC 10500] gi|218722014|gb|EED21432.1| tRNA processing endoribonuclease Trz1, putative [Talaromyces stipitatus ATCC 10500] Length = 1769 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 95/303 (31%), Gaps = 93/303 (30%) Query: 10 LGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV- 68 LG G+S P R S+ + V ++D G + Q+ Sbjct: 1316 LGTGSSS----------------PSKHRNVSATLLKVVG----KGYYLLDCGENTLGQLK 1355 Query: 69 -------LREQVLSIDAVLYTHPHADHIHG----IDGLRGYFLKQKRPIDVYAAPDCMKH 117 RE + ++ + +H HADH G I + P A D + Sbjct: 1356 RTYPPEQFREVMQNLRMIWISHMHADHHLGSVAVIKEWYEVNYGARSPSTGSAPEDVTEV 1415 Query: 118 LFES----------FRYC--FKALDDRTYPPIVNPIVI---------------------- 143 L + +Y + +++ + I+ V+ Sbjct: 1416 LKQKRLAVVGETMYIQYLEEYAGVENFGFEKILPLAVLPPAIEKPYTSLVYRYTQPDGTT 1475 Query: 144 -ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN-----------------VAYCT 185 E+ P+ ++ P+LQ + SL F N V+Y Sbjct: 1476 QEDGRNPVFLRFDTPKSHLTPLLQATTGLVSLNAVFVNHCRHAMGLSLEWEDGFKVSYSG 1535 Query: 186 DVNAFPAESLEKL-QNLDFLIIDA-----LKNGLH-SSHFSLSESLKKIELINPKNAILT 238 D P+ + ++ ++ LI +A L+ H + SE++ +N K +LT Sbjct: 1536 DCR--PSMNFAQMGRDSTLLIHEATFQDDLQGQALAKKHSTTSEAMMVGRWMNAKLVLLT 1593 Query: 239 HMH 241 H Sbjct: 1594 HFS 1596 >gi|281209989|gb|EFA84157.1| cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase [Polysphondylium pallidum PN500] Length = 932 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 24/174 (13%) Query: 52 SNTTVIVD--TGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + V+VD G Y+Q ++ V+ TH H+DH G+ + + + +Y Sbjct: 550 NGNGVLVDPPIGTSKYLQHFGLGGHLVECVILTHCHSDHDSGLLQ----QIVEGTKMTLY 605 Query: 110 AAPDCMKHLFESFRYCFKALDD----RTYPPIVNPIVIENNDVPICMKSAGGVIEAIPIL 165 + + +D + P+ + + I I Sbjct: 606 TT-RTIHDSYMRKAQALTGIDKINEFYNWVPVTIGDTVRIQGADFEFDYSFHTIPTIRFK 664 Query: 166 QQ-HGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHF 218 HG+ ++Y +D P SL +L + +I+ L+ H Sbjct: 665 ISFHGK---------TMSYSSDTKYCPE-SLSQL--VKDGVINPLRESSLRIHM 706 >gi|222054268|ref|YP_002536630.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221563557|gb|ACM19529.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 309 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Query: 44 ISRVSERGSNTTVIVDTGP-----DFYMQVLREQVLSIDAVLYTHPHADHIHG 91 IS G T++VD GP Q+ ++ + +D VL TH H DH G Sbjct: 23 ISSWLYLGETFTILVDPGPLSTITHLCSQLRQKGIERLDYVLLTHIHIDHAGG 75 >gi|126466034|ref|YP_001041143.1| beta-lactamase domain-containing protein [Staphylothermus marinus F1] gi|126014857|gb|ABN70235.1| beta-lactamase domain protein [Staphylothermus marinus F1] Length = 237 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Query: 41 SLKISRVSERGSNTTVIVD--TGPD---FYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 S+ I + E+ ++ D T P+ F + L + +D +H H+DH G Sbjct: 26 SIYIEVMGEK-----LLFDANTSPEIIRFNAEQLGVNLEKLDYCFLSHHHSDHYGGFK-- 78 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFE 120 YF KR + +YA P + +L Sbjct: 79 --YFTNLKRKLKIYAPPGDVNYLKN 101 >gi|145553511|ref|XP_001462430.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430269|emb|CAK95057.1| unnamed protein product [Paramecium tetraurelia] Length = 712 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 98/294 (33%), Gaps = 88/294 (29%) Query: 3 DYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGP 62 D+ LG C P R S + + + +I+D G Sbjct: 399 DHIRLIFLGT---------------C-SMKPGQLRNVSGIIL---VNEKLKSNIILDCGE 439 Query: 63 DFYMQVLREQVLSIDA----VLYTHPHADHIHGIDGLRGYFLKQKRPIDVYA-------- 110 + Q+ E ++ +D + +H H+DH G+ L+ K ++Y Sbjct: 440 GTFKQISDENIV-LDNKPLIIWISHAHSDHHLGL--LQIVHNLCKCHNEIYLIVPAIVVP 496 Query: 111 -----------------------APDCMKHLFESFRYCFKALDDRTYPPI---VNPIVIE 144 D + + + + CF R + N I+ Sbjct: 497 WLMFFKEILGEQCNWKIIVSQQFDQDFKEDINQLIKDCFHQCRIRQGELVQIQDNQNFIK 556 Query: 145 NNDVPIC---MKSAGGVIEAIPILQQHGRISSLGFRFG-----NVAYCTDVNAFPAESLE 196 N + I + I+ P+ +H S G R +++Y D P + Sbjct: 557 NYEDLISCLKDQFELDSIKVTPV--EHCP-QSYGVRLNLCDGRSLSYSGDTR--PCDRFI 611 Query: 197 KL-QNLDFLI----------IDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 KL QN+D LI +AL+N H ++SE++K L + K LTH Sbjct: 612 KLSQNVDILIHESTFTDDLQENALQNM----HSTISEAVKVGMLADAKVITLTH 661 >gi|170722201|ref|YP_001749889.1| beta-lactamase domain-containing protein [Pseudomonas putida W619] gi|169760204|gb|ACA73520.1| beta-lactamase domain protein [Pseudomonas putida W619] Length = 455 Score = 43.6 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 12/73 (16%) Query: 52 SNTTVIVDTGPDF-YMQV-------LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 +T V++D G Y Q+ L + ++DAV+ TH H DH +++ Sbjct: 22 DSTRVLIDCGLFQGYKQLRLRNWEPLPTALRTVDAVVLTHAHLDHSG----YLPVLVREG 77 Query: 104 RPIDVYAAPDCMK 116 VYA P Sbjct: 78 FSGPVYATPATCA 90 >gi|328882396|emb|CCA55635.1| ComEC or Rec2-related protein [Streptomyces venezuelae ATCC 10712] Length = 920 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G + V+VD GPD + LRE V + +L TH HADH+ G+ Sbjct: 656 GGDAAVVVDAGPDPVPVDRCLRELGVRRVPLLLLTHFHADHVAGL 700 >gi|302408295|ref|XP_003001982.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261358903|gb|EEY21331.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 308 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Query: 52 SNTTVIVDTGPDFYM------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +++DTG L E+ SI+ VL +H H DH G+ + Sbjct: 63 GRHRILIDTGEGKPAWAESVKSALEEEKASIETVLVSHWHHDHTGGLADILSIC 116 >gi|254369589|ref|ZP_04985600.1| hypothetical protein FTAG_01478 [Francisella tularensis subsp. holarctica FSC022] gi|157122543|gb|EDO66678.1| hypothetical protein FTAG_01478 [Francisella tularensis subsp. holarctica FSC022] Length = 320 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 43/226 (19%) Query: 52 SNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLR--GYFLKQKR--- 104 + +++D G ++ +D++ TH HADH I + YF K++R Sbjct: 61 GKSKILIDAGGGTYLRFGQSGARLEDLDSINMTHFHADHSADIPAILKGAYFSKRQRIFR 120 Query: 105 ----PIDVYA----------APDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPI 150 I V++ M L Y + + ++ I I+ + Sbjct: 121 SQFLHIQVFSQARWIFFKEYLEKIMVLLHICMEYL--RVQMVSLLSLILYINIDYTKLEP 178 Query: 151 CMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCT-----DVNAFPAESLEKLQNL 201 + + G + +L ++ G + + + F ++ +N Sbjct: 179 TKVFSNDEFTVWALGIPKGDVPTLAYKIVSKKGTIVVTGAGGSNEHDKFRDAFIKFAKNA 238 Query: 202 DFLII--------DALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 D L++ DA + LH+ + + +NPK +L+H Sbjct: 239 DILMMPMPIDESADAAGSFLHAKPSVIGQV---AAAVNPKALVLSH 281 >gi|111026992|ref|YP_708970.1| hydrolase [Rhodococcus jostii RHA1] gi|110825531|gb|ABH00812.1| possible hydrolase [Rhodococcus jostii RHA1] Length = 377 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 75/272 (27%), Gaps = 63/272 (23%) Query: 52 SNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKR----- 104 +VD G Y ++ + + S+ V TH H+DH+ + + + L Sbjct: 92 GGRPYLVDAGSSAYRRMAQAGIGAKSLGGVFVTHMHSDHLADLFTI--FLLNVGNYMAGA 149 Query: 105 ---PIDVYAAPDC----------------------MKHLFESFRYCFKALDDRTYPPIVN 139 P ++ + K +D + + Sbjct: 150 PETPTPIFGPGHIAGAPHAEVSGMQGMLQGVLAAWAHEIDVRNAEAAKPVDYQKVVVGRD 209 Query: 140 PIVIE---------NNDVPICMKSAGGVIEAIPILQQHG-RISSLGFRF----GNVAYCT 185 ++ + D+ + IL HG + +RF G+V + Sbjct: 210 VVIPDSVRMSADNPAPDMDPFPVFEDDRVRVTGILVPHGAALPGFAYRFDTDNGSVTFSG 269 Query: 186 DVNAFPAESLEKLQNLDFLIIDALK-------------NGLHS-SHFSLSESLKKIELIN 231 D + D L+ +A+ H +H S + + Sbjct: 270 DTAR-SSNVARLATGTDILVHEAIDIDYYKRNGFPEDVLEHHRQTHTSPDDVGRVATEAG 328 Query: 232 PKNAILTHMHVDLDYDMVLKSTPSRVVPAFDG 263 K +L H+ + SRV + G Sbjct: 329 AKKVVLNHLAPGDPRLVTDDEWVSRVSSTYAG 360 >gi|20807203|ref|NP_622374.1| RNA processing exonuclease [Thermoanaerobacter tengcongensis MB4] gi|20515705|gb|AAM23978.1| predicted exonuclease of the beta-lactamase fold involved in RNA processing [Thermoanaerobacter tengcongensis MB4] Length = 541 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 12/80 (15%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 N +VD G + Q + ID VL TH H DH I K+ Sbjct: 22 ENARFLVDCGMFQGGEVEDELNYQEFIFDIKDIDFVLLTHAHIDHSGRI----PVLYKRG 77 Query: 104 RPIDVYAAPDCMKHLFESFR 123 +YA + Sbjct: 78 YRKRIYATHATVDLCRYMLP 97 >gi|329572339|gb|EGG53996.1| DNA internalization competence protein ComEC/Rec2-like protein [Enterococcus faecalis TX1467] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|323481436|gb|ADX80875.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis 62] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|323488849|ref|ZP_08094089.1| hypothetical protein GPDM_05876 [Planococcus donghaensis MPA1U2] gi|323397547|gb|EGA90353.1| hypothetical protein GPDM_05876 [Planococcus donghaensis MPA1U2] Length = 555 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 18/79 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + V I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDDLLGIDYVIPDYTYLVKNVDKIKGLFITHGHEDHIGGIP-----YLLK 88 Query: 103 KRPIDVYAAPDCMKHLFES 121 K I VY + L + Sbjct: 89 KINIPVYGGKLALGLLRKK 107 >gi|315574321|gb|EFU86512.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0309B] gi|315580204|gb|EFU92395.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0309A] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|315170255|gb|EFU14272.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX1342] Length = 686 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 476 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 530 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 531 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 581 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 582 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 633 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 634 GLNNRFKHPHQETLATL 650 >gi|315164897|gb|EFU08914.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX1302] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|315161637|gb|EFU05654.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0645] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 VLNNRFKHPHQETLATL 673 >gi|315159044|gb|EFU03061.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0312] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|315144861|gb|EFT88877.1| putative DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX2141] Length = 574 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 364 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 418 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 419 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 469 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 470 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 521 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 522 GLNNRFKHPHQETLATL 538 >gi|315025366|gb|EFT37298.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX2137] Length = 723 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 513 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 567 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 568 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 618 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 619 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 670 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 671 GLNNRFKHPHQETLATL 687 >gi|312953528|ref|ZP_07772366.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0102] gi|310628540|gb|EFQ11823.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0102] gi|315152018|gb|EFT96034.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0031] gi|327535731|gb|AEA94565.1| competence protein ComEC [Enterococcus faecalis OG1RF] Length = 723 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 513 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 567 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 568 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 618 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 619 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 670 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 671 GLNNRFKHPHQETLATL 687 >gi|307277119|ref|ZP_07558223.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX2134] gi|306506049|gb|EFM75215.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX2134] Length = 723 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 513 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 567 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 568 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 618 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 619 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 670 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 671 GLNNRFKHPHQETLATL 687 >gi|307285771|ref|ZP_07565905.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0860] gi|306502532|gb|EFM71799.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0860] Length = 698 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 488 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 542 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 543 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 593 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 594 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 645 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 646 GLNNRFKHPHQETLATL 662 >gi|312195005|ref|YP_004015066.1| RNA-metabolising metallo-beta-lactamase [Frankia sp. EuI1c] gi|311226341|gb|ADP79196.1| RNA-metabolising metallo-beta-lactamase [Frankia sp. EuI1c] Length = 561 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 13/100 (13%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF +R+++ I+AV+ TH H DHI + Y L+++ I + + + Sbjct: 65 PDF--TAIRDRLDDIEAVILTHAHEDHIGAV----PYLLRERADIPLVGTRLTLALM--- 115 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 L + P+ I E + Sbjct: 116 ----VAKLQEHRIKPVTLQITEEERHSFGPFDLEFFAVNH 151 >gi|257416684|ref|ZP_05593678.1| competence protein ComEC [Enterococcus faecalis AR01/DG] gi|257158512|gb|EEU88472.1| competence protein ComEC [Enterococcus faecalis ARO1/DG] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|257087477|ref|ZP_05581838.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|256995507|gb|EEU82809.1| conserved hypothetical protein [Enterococcus faecalis D6] Length = 754 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 544 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 598 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 599 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 649 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 650 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 701 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 702 GLNNRFKHPHQETLATL 718 >gi|257084527|ref|ZP_05578888.1| conserved hypothetical protein [Enterococcus faecalis Fly1] gi|256992557|gb|EEU79859.1| conserved hypothetical protein [Enterococcus faecalis Fly1] Length = 754 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 544 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 598 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 599 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 649 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 650 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 701 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 702 GLNNRFKHPHQETLATL 718 >gi|256853807|ref|ZP_05559172.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|307290499|ref|ZP_07570412.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0411] gi|256710750|gb|EEU25793.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|306498446|gb|EFM67950.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0411] gi|315030174|gb|EFT42106.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX4000] Length = 738 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 528 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 582 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 583 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 633 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 634 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 685 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 686 GLNNRFKHPHQETLATL 702 >gi|256616996|ref|ZP_05473842.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256596523|gb|EEU15699.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 754 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 544 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 598 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 599 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 649 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 650 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 701 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 702 GLNNRFKHPHQETLATL 718 >gi|255975153|ref|ZP_05425739.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|255968025|gb|EET98647.1| conserved hypothetical protein [Enterococcus faecalis T2] Length = 754 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 544 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 598 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 599 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 649 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 650 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 701 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 702 GLNNRFKHPHQETLATL 718 >gi|255972086|ref|ZP_05422672.1| predicted protein [Enterococcus faecalis T1] gi|257079678|ref|ZP_05574039.1| membrane metal-binding protein [Enterococcus faecalis JH1] gi|255963104|gb|EET95580.1| predicted protein [Enterococcus faecalis T1] gi|256987708|gb|EEU75010.1| membrane metal-binding protein [Enterococcus faecalis JH1] Length = 754 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 544 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 598 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 599 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 649 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 650 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 701 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 702 GLNNRFKHPHQETLATL 718 >gi|255525919|ref|ZP_05392846.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] gi|255510413|gb|EET86726.1| beta-lactamase domain protein [Clostridium carboxidivorans P7] Length = 556 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 18/77 (23%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 N +++D G F L + V+ TH H DHI + Y Sbjct: 30 DNEIIVIDCGLGFPDMEMYGVDLVIPDITYLLNNRDKVKGVMLTHGHEDHIGAL----PY 85 Query: 99 FLKQKRPIDVYAAPDCM 115 LKQ + VY + Sbjct: 86 VLKQLN-VPVYGTRLTL 101 >gi|290893114|ref|ZP_06556102.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] gi|290557276|gb|EFD90802.1| metallo-beta-lactamase [Listeria monocytogenes FSL J2-071] Length = 205 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 37/113 (32%), Gaps = 19/113 (16%) Query: 78 AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI 137 AVL TH H DHI ++ +R I VY +P + L + I Sbjct: 50 AVLLTHCHYDHIGALEEIRT-TYN----IPVYVSPLEQEWL--------SNPELNLSAHI 96 Query: 138 VNPIVI----ENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTD 186 +I EN G + +P I S+ F F + D Sbjct: 97 AGKAIIAQPAENEFTLGEYNIEGFQFKVVPTPGH--SIGSVSFIFDDFVVVGD 147 >gi|229549381|ref|ZP_04438106.1| competence protein ComEC [Enterococcus faecalis ATCC 29200] gi|294780836|ref|ZP_06746191.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis PC1.1] gi|307270794|ref|ZP_07552084.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX4248] gi|229305618|gb|EEN71614.1| competence protein ComEC [Enterococcus faecalis ATCC 29200] gi|294452081|gb|EFG20528.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis PC1.1] gi|306512908|gb|EFM81550.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX4248] Length = 709 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|227553979|ref|ZP_03984026.1| competence protein ComEC [Enterococcus faecalis HH22] gi|227176882|gb|EEI57854.1| competence protein ComEC [Enterococcus faecalis HH22] Length = 719 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 509 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 563 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 564 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 614 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 615 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 666 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 667 GLNNRFKHPHQETLATL 683 >gi|134096939|ref|YP_001102600.1| metallo-beta-lactamase superfamily protein [Saccharopolyspora erythraea NRRL 2338] gi|291006619|ref|ZP_06564592.1| metallo-beta-lactamase superfamily protein [Saccharopolyspora erythraea NRRL 2338] gi|133909562|emb|CAL99674.1| metallo-beta-lactamase superfamily protein [Saccharopolyspora erythraea NRRL 2338] Length = 275 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%) Query: 47 VSERGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 V S +++D GP + + VL TH H DH G G Sbjct: 37 VGSPDSADRIVIDPGPADRDHLALAAERPVSVVLLTHHHPDHTAGARDFAGLT 89 >gi|30022341|ref|NP_833972.1| hydroxyacylglutathione hydrolase [Bacillus cereus ATCC 14579] gi|29897898|gb|AAP11173.1| Hydroxyacylglutathione hydrolase [Bacillus cereus ATCC 14579] Length = 209 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 20 NDQKECIIFDPGHEGEKLVTYLQEKQLKPLAVLLTHAHFDHIGAVDAVRDAFH-----IP 74 Query: 108 VYAAPD 113 VY + Sbjct: 75 VYVHKE 80 >gi|29376941|ref|NP_816095.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis V583] gi|29344406|gb|AAO82165.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis V583] Length = 779 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 569 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 623 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 624 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 674 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 675 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 726 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 727 GLNNRFKHPHQETLATL 743 >gi|150015993|ref|YP_001308247.1| beta-lactamase domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902458|gb|ABR33291.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052] Length = 555 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 18/73 (24%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +I+D G F L + I + TH H DHI + Y L+Q Sbjct: 33 IIIDCGLKFPDDDMFGIDIVIPDVSYLIKNSEKIKGIFLTHGHEDHIGAL----PYVLRQ 88 Query: 103 KRPIDVYAAPDCM 115 + VY + Sbjct: 89 LN-VPVYGTKLTL 100 >gi|75763951|ref|ZP_00743580.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899427|ref|YP_002447838.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228902775|ref|ZP_04066921.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] gi|74488563|gb|EAO52150.1| Hydroxyacylglutathione hydrolase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218541364|gb|ACK93758.1| metallo-beta-lactamase family protein [Bacillus cereus G9842] gi|228856849|gb|EEN01363.1| Metallo-beta-lactamase [Bacillus thuringiensis IBL 4222] Length = 209 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 20 NDQKECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFY-----IP 74 Query: 108 VYAAPD 113 VY + Sbjct: 75 VYVHKE 80 >gi|330445179|ref|ZP_08308831.1| hydroxyacylglutathione hydrolase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489370|dbj|GAA03328.1| hydroxyacylglutathione hydrolase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 252 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 46 RVSERGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 + + N V+VD G + L + L++DA+L TH H+DHI GI L+ Sbjct: 16 WLIQNKENHCVVVDPGDATPVFEALEKNNLTLDAILITHHHSDHIGGISELK 67 >gi|307287674|ref|ZP_07567717.1| putative DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0109] gi|306501412|gb|EFM70715.1| putative DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0109] Length = 574 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 364 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 418 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N V + S GG ++I Q LG R + + Sbjct: 419 KSGTDCRPILAPKRI-NGPVSFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 469 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 470 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 521 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 522 GLNNRFKHPHQETLATL 538 >gi|326773696|ref|ZP_08232979.1| metallo-beta-lactamase family protein [Actinomyces viscosus C505] gi|326636926|gb|EGE37829.1| metallo-beta-lactamase family protein [Actinomyces viscosus C505] Length = 561 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 20/108 (18%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF + ++ + A++ TH H DHI G+ Y L+ + I + + + + Sbjct: 64 PDFSS--IEHRIDDVVALVLTHGHEDHIGGV----PYLLRLRDDIPLVGSELTLAFVE-- 115 Query: 122 FRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHG 169 L + P++ VIE+ +V G + + H Sbjct: 116 -----AKLKEHRIRPVLR-QVIEHEEVSY------GPFDLEFVAVNHS 151 >gi|229098733|ref|ZP_04229673.1| Metallo-beta-lactamase [Bacillus cereus Rock3-29] gi|228684812|gb|EEL38750.1| Metallo-beta-lactamase [Bacillus cereus Rock3-29] Length = 239 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E+ L AVL TH H DHI +D +R F Sbjct: 46 YILTNDQNECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFH--- 102 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 103 --IPVYVHKE 110 >gi|194476911|ref|YP_002049090.1| hypothetical protein PCC_0441 [Paulinella chromatophora] gi|171191918|gb|ACB42880.1| hypothetical protein PCC_0441 [Paulinella chromatophora] Length = 657 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGI-DGLRGYFLKQKRPIDVYAAPDCMKHLFESF 122 LRE I ++ TH H DHI GI LR + + PI +Y M L Sbjct: 66 LRENQKRIRGMIVTHGHEDHIGGIPHHLRNFTI----PI-IYGPRLAMSMLQGKM 115 >gi|90075642|dbj|BAE87501.1| unnamed protein product [Macaca fascicularis] Length = 202 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGP-------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GPRRILIDTGEPAIPEYIRCLKQALTEFNTAIQEIVVTHWHHDHSGGIGDI 89 >gi|255016998|ref|ZP_05289124.1| hypothetical protein LmonF_02778 [Listeria monocytogenes FSL F2-515] Length = 278 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-F 176 L E + FK ++ I+ + I + G I G F Sbjct: 108 LKEHRKLRFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDF 165 Query: 177 RFGNVA---YCTDVNAFPA 192 +F A Y +D++ Sbjct: 166 KFDQSAKDGYASDLSHIAE 184 >gi|256825550|ref|YP_003149510.1| ComEC/Rec2-related protein [Kytococcus sedentarius DSM 20547] gi|256688943|gb|ACV06745.1| ComEC/Rec2-related protein [Kytococcus sedentarius DSM 20547] Length = 829 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 52 SNTTVIVDTGP---DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + V+VDTGP + V ++DAV+ TH HADH + + Sbjct: 575 PDRAVLVDTGPPGARTPSCLRAAGVRALDAVVVTHAHADHSGNLGAVLDAV 625 >gi|89095440|ref|ZP_01168352.1| metallo-beta-lactamase family protein [Oceanospirillum sp. MED92] gi|89080309|gb|EAR59569.1| metallo-beta-lactamase family protein [Oceanospirillum sp. MED92] Length = 246 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 27/192 (14%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ----KRP 105 +G ++D G + + D V+ TH H DH + ++ R Sbjct: 36 KGEKPVCLIDLGLGVTRTLTQYGYSLPDTVIITHNHTDHAGEL----PVVIRVEESKGRR 91 Query: 106 IDVYAAPDCMKHLF-ESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 +++ AA + L + + D + N + + N+ ++ I Sbjct: 92 LNIAAATPVSERLKHQRMA---EHNDLYPAETLANWLSLPPNERSDLTD----DLQIQFI 144 Query: 165 LQQHGRISSLGFR-----FGN--VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSH 217 +H GF+ + Y D + F +++ I DA + + H Sbjct: 145 EAKHSE-KCFGFKLFLKGIDTPLLGYTGD-SGFYPSLYQQISQCSVSIFDA-RPNGNEWH 201 Query: 218 FSLSESLKKIEL 229 + E L+ + Sbjct: 202 AGIDE-LEAYQR 212 >gi|69244950|ref|ZP_00603140.1| Beta-lactamase-like [Enterococcus faecium DO] gi|258617087|ref|ZP_05714857.1| metal dependent hydrolase [Enterococcus faecium DO] gi|294615145|ref|ZP_06695030.1| metal dependent hydrolase [Enterococcus faecium E1636] gi|68196116|gb|EAN10547.1| Beta-lactamase-like [Enterococcus faecium DO] gi|291592002|gb|EFF23626.1| metal dependent hydrolase [Enterococcus faecium E1636] Length = 274 Score = 43.6 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 43/215 (20%) Query: 41 SLKISRVSERGSNTTVIVDTGPDFYM----QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 SL I+ + D G + + + E + ++AV+ +H H+DH G+ Sbjct: 23 SLLINYSG-----KKYLFDAGANKKLVYNATKMGETLNDLEAVIISHGHSDHTGGLR--- 74 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA- 155 +LK +Y A + + K L Y I +++ ++ +K+ Sbjct: 75 --YLKSGNA-PIYTAEGV------TLPHYLKILTTFLYVGIPKNEILKMHENLHTIKTKT 125 Query: 156 --GGVIEAIPILQQHGRISSLGFRFGN-VAYCTDVNAFPAESLEKLQNLDFLII--DALK 210 IP+ + + +L + + Y + F E L ++ D LI+ Sbjct: 126 ELAPSFHIIPLGKANSTTKNLYKKMDDKFVY----DDFSDELLVVIEQEDGLIVFTGC-- 179 Query: 211 NGLHSSHFSLSESLKKIELINPKN--AILT---HM 240 SH + + ++ P L HM Sbjct: 180 -----SHHGIIDMMEIALETFPTKPIKYLIGGFHM 209 >gi|331699929|ref|YP_004336168.1| Ribonuclease Z [Pseudonocardia dioxanivorans CB1190] gi|326954618|gb|AEA28315.1| Ribonuclease Z [Pseudonocardia dioxanivorans CB1190] Length = 307 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 10/132 (7%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS--IDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 R ++ D G Q+L V S I + TH H DH G+ G+ Q+ +D Sbjct: 28 RWDGEGLLFDPGEGTQRQLLFAGVPSSAITRICLTHFHGDHCLGVPGVV-----QRLSLD 82 Query: 108 VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQ 167 A P + + + + + + A G + A + Sbjct: 83 AVAHPVVAHYPASGAHWFARLRHATPFHEVADLQERPVCGDGPIATGAFGTLTARRLDHP 142 Query: 168 HGRISSLGFRFG 179 + S G+R Sbjct: 143 ---VESYGYRLD 151 >gi|326391500|ref|ZP_08213034.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] gi|325992476|gb|EGD50934.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter ethanolicus JW 200] Length = 542 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 24/80 (30%), Gaps = 12/80 (15%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 T +VD G + Q V ID VL TH H DH I K+ Sbjct: 22 EKTKFLVDCGMFQGGEVEDELNYQEFIFDVGDIDFVLLTHAHIDHSGRI----PLLYKRG 77 Query: 104 RPIDVYAAPDCMKHLFESFR 123 +YA + Sbjct: 78 YRKRIYATKATVDLCRYMLP 97 >gi|320527235|ref|ZP_08028421.1| hypothetical protein HMPREF9430_00527 [Solobacterium moorei F0204] gi|320132426|gb|EFW24970.1| hypothetical protein HMPREF9430_00527 [Solobacterium moorei F0204] Length = 555 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 PDF LRE I A+ TH H D + + L L++ I VY AP L Sbjct: 50 PDFRY--LRENQSRIKAIFITHGHEDVMAALPNL----LREIPDIPVYTAPLTAMMLERK 103 >gi|319956702|ref|YP_004167965.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] gi|319419106|gb|ADV46216.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] Length = 471 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 10/71 (14%) Query: 52 SNTTVIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP 105 + ++VD G + R +DA+L TH H DH+ I L +K+ Sbjct: 29 NGMRILVDCGMYQGREEPRNWEPFGFNPKKVDALLVTHAHLDHVGRIPKL----VKEGFR 84 Query: 106 IDVYAAPDCMK 116 +YA + Sbjct: 85 GPIYATEATFE 95 >gi|315604276|ref|ZP_07879342.1| metallo-beta-lactamase superfamily protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313982|gb|EFU62033.1| metallo-beta-lactamase superfamily protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 238 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 8/123 (6%) Query: 49 ERGSNTTVIVDTGPDFYMQVLREQVLS----IDAVLYTHPHADHIHGIDGLRGYFLKQKR 104 G+ T ++VD ++RE + + A++ TH H DH+ D + Sbjct: 20 PSGAGTALVVDPSAGIR-HLIREVLEHEGVGVGALVLTHAHPDHVW--DAAEVATWGRDG 76 Query: 105 PIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPI 164 + VY M + + + D P V P + G + +P Sbjct: 77 HVPVYLPGPDMYRMDDPASHLPMPTPDFAG-PWVKPSDLREMPADSFEICPGLTLRMLPA 135 Query: 165 LQQ 167 Sbjct: 136 PGH 138 >gi|298479594|ref|ZP_06997794.1| metal-dependent hydrolase [Bacteroides sp. D22] gi|298273984|gb|EFI15545.1| metal-dependent hydrolase [Bacteroides sp. D22] Length = 298 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 34/200 (17%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDF--YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 +SL + ++ + +D D+ Y Q D +L TH H DH + Sbjct: 100 ASLLLDYAGQK-----IFIDPVSDYADYTQQ-----PKADFILITHEHGDHF----DTKA 145 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + + A P+C K L + + + + I +E VP + G Sbjct: 146 IAAIETNQTKIIANPNCRKMLNRG-----QEMKNDDVLQLAKDIKLEA--VPAYNTTPGR 198 Query: 158 VIEAIPILQQHGRISSLGFRFGNVAYC-TDVNAFPAESLEKLQNLDFLIIDALKNGLHSS 216 + P + +G I +LG G Y D P L +++++D + + Sbjct: 199 D-KFHPKGRDNGYILTLG---GTRIYIAGDTEDIPE--LNQVKDIDIAFLPVNQPYT--- 249 Query: 217 HFSLSESLKKIELINPKNAI 236 + ++++ ++I P+ Sbjct: 250 -MTPEQAIRAAKIIKPRILY 268 >gi|295101528|emb|CBK99073.1| conserved hypothetical protein [Faecalibacterium prausnitzii L2-6] Length = 595 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 41/143 (28%), Gaps = 30/143 (20%) Query: 53 NTTVIVDTGPDFYMQVL-------------REQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 +IVD G F + + I +L TH H DHI I + Sbjct: 69 GDMIIVDCGLVFPDNDMFGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGSIP-----Y 123 Query: 100 LKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L QK + +Y + L++ + I K G Sbjct: 124 LLQKFDLPIYGTRLTCGLIRNK-------LEEFGLAGKTKFVEITPRQ-----KLKLGCF 171 Query: 160 EAIPILQQHGRISSLGFRFGNVA 182 PI H ++ F + A Sbjct: 172 TVEPIHVNHSIPDAVAFAIDSPA 194 >gi|320008193|gb|ADW03043.1| RNA-metabolising metallo-beta-lactamase [Streptomyces flavogriseus ATCC 33331] Length = 561 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 41/107 (38%), Gaps = 18/107 (16%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ Y L+ K I + + + + Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PYLLRLKPDIPLIGSKLTLALI---------- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 + + + P +E + + GV + I H +L Sbjct: 116 -EAKLQEHRIRPYTLEVTE---GQRERIGVFDCEFIAVNHSIPDALA 158 >gi|257870007|ref|ZP_05649660.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] gi|257804171|gb|EEV32993.1| metallo-beta-lactamase superfamily protein [Enterococcus gallinarum EG2] Length = 559 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 18/91 (19%) Query: 46 RVSERGSNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGI 92 + + +++D G F + + + + ++ TH H DHI GI Sbjct: 25 CYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSYIVQNITKVKGLVITHGHEDHIGGI 84 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFR 123 +L ++ I +YA P + + Sbjct: 85 P-----YLLREANIPIYAGPLALALITNKLD 110 >gi|167378317|ref|XP_001734758.1| hypothetical protein [Entamoeba dispar SAW760] gi|165903598|gb|EDR29073.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 217 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 13/79 (16%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQ 102 RG + +I+D ++ + AV+ TH H DH G D + Sbjct: 114 RGQSGWIIIDCMSTIASSSKAFGLIKSTVEDLPVSAVVITHSHFDHFGGYDAVAT----- 168 Query: 103 KRPIDVYAAPDCMKHLFES 121 +Y + LF+ Sbjct: 169 -HNTPLYIPETFYESLFDE 186 >gi|138896015|ref|YP_001126468.1| hydroxyacylglutathione hydrolase [Geobacillus thermodenitrificans NG80-2] gi|134267528|gb|ABO67723.1| Hydroxyacylglutathione hydrolase [Geobacillus thermodenitrificans NG80-2] Length = 265 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSID--AVLYTHPHADHIHGIDGLRGYFLKQKRPIDVY 109 + VIVD G + V R + + A+L TH H DHI GI + + + VY Sbjct: 77 DGSCVIVDPGAEGAALVRRMEEKQLTPLAILLTHAHFDHIGGIPDVLA-----RWDVPVY 131 Query: 110 AAPD 113 + Sbjct: 132 LHEN 135 >gi|116251650|ref|YP_767488.1| beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] gi|115256298|emb|CAK07379.1| putative beta-lactamase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 544 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 17/85 (20%) Query: 40 SSLKISRVSERGSNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHG 91 SS + R +++D G + + IDAVL TH H DH Sbjct: 18 SSFLLETGGAR-----ILIDCGMFQGSKSEKELNYKPFPFVTSRIDAVLLTHAHIDHSGL 72 Query: 92 IDGLRGYFLKQKRPIDVYAAPDCMK 116 + L +YA P + Sbjct: 73 LPKLAKAGYGG----PIYATPATID 93 >gi|20092670|ref|NP_618745.1| cleavage and polyadenylation specificity factor [Methanosarcina acetivorans C2A] gi|19917954|gb|AAM07225.1| cleavage and polyadenylation specificity factor [Methanosarcina acetivorans C2A] Length = 637 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 18/87 (20%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFY--MQVLR-------EQVLSIDAVLYTHPHADHI 89 RS +S R +++D G + + + IDAV+ TH H DH Sbjct: 194 RSCFLLSTPESR-----ILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQ 248 Query: 90 HGIDGLRGYFLKQKRPIDVYAAPDCMK 116 L K VY P Sbjct: 249 G----LVPLLFKYGYEGPVYCTPPTRD 271 >gi|26553981|ref|NP_757915.1| hypothetical protein MYPE5290 [Mycoplasma penetrans HF-2] gi|26453989|dbj|BAC44319.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 629 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 54/157 (34%), Gaps = 28/157 (17%) Query: 50 RGSNTTVIVDTGPDFYMQVLR-------------EQVLSIDAVLYTHPHADHIHGIDGLR 96 + T++VD G F L E IDA+L TH H DHI GI L Sbjct: 95 EHNEETIMVDYGIKFASSDLLGINGIVANTSYFVENNRPIDALLLTHGHEDHIGGIPYLL 154 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 + K+ +YA + + D Y P + P ++ + Sbjct: 155 Q-TTEVKK---IYAPLLATELIKRRLS----EFRDIKYNPEIIPFGDDSKVSTKYFEVDF 206 Query: 157 GVI-EAIP------ILQQHGRISSLGFRFGNVAYCTD 186 + +IP I +GRI S G + TD Sbjct: 207 FRVCHSIPDSFGMCIKTPNGRIVSAGDYRYDFGKDTD 243 >gi|110635857|ref|YP_676065.1| beta-lactamase-like [Mesorhizobium sp. BNC1] gi|110286841|gb|ABG64900.1| beta-lactamase-like protein [Chelativorans sp. BNC1] Length = 277 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 12/123 (9%) Query: 36 RRTRSSLKISRVSERGSNTTVIVDTGPDFYMQVLRE-------QVLSIDAVLYTHPHADH 88 R + + + E S V++DTG ++E A++ TH H DH Sbjct: 30 YRRLTMVNVLFFGEPSSKDWVLIDTGVAGSAGAIQESAAARFGDGKPPSAIVLTHGHFDH 89 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 + + L + I VYA P +L S Y + + + + Sbjct: 90 VGALQSLL-----HQWDIPVYAHPLEHPYLNGSRSYPSADPWVGGGLMALLSPLFPTSPI 144 Query: 149 PIC 151 + Sbjct: 145 DVS 147 >gi|307244361|ref|ZP_07526474.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] gi|306492262|gb|EFM64302.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM 17678] Length = 556 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 18/77 (23%) Query: 56 VIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + + + TH H DHI I +L + Sbjct: 34 IVIDAGLSFPEDELLGIDIVIPDILYLMRNINKVKGIFITHGHEDHIGAIP-----YLLK 88 Query: 103 KRPIDVYAAPDCMKHLF 119 K + VY +P ++ + Sbjct: 89 KINVPVYGSPLSIELIR 105 >gi|258652452|ref|YP_003201608.1| beta-lactamase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555677|gb|ACV78619.1| beta-lactamase domain protein [Nakamurella multipartita DSM 44233] Length = 580 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHL 118 PD ++ +++ IDAV+ TH H DHI + + L+ + + V A + + Sbjct: 83 PDLR--LVEDRIDDIDAVVITHGHEDHIGAL----PWLLRLRPDLPVLGARFSLALI 133 >gi|261378660|ref|ZP_05983233.1| metallo-beta-lactamase domain protein [Neisseria cinerea ATCC 14685] gi|269145003|gb|EEZ71421.1| metallo-beta-lactamase domain protein [Neisseria cinerea ATCC 14685] Length = 210 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 46/134 (34%), Gaps = 11/134 (8%) Query: 37 RTRSSLKISRVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDG 94 R +L + + S V+ D G D F +Q L + L++ A+ TH H DH G+ Sbjct: 14 RQNCTL----IWDDESGEAVLTDVGGDVPFLLQELANRKLTLTAIWLTHGHLDHAGGVVE 69 Query: 95 LRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 + + R + V + L +S P +E + + Sbjct: 70 ML-----KTRNVPVLGPHPDDEFLLQSLPQTTAQYGFPVSPAFSPNRWLEEGETLTVGRY 124 Query: 155 AGGVIEAIPILQQH 168 A V+ H Sbjct: 125 AFQVLHIPGHTPGH 138 >gi|171463548|ref|YP_001797661.1| hydroxyacylglutathione hydrolase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193086|gb|ACB44047.1| hydroxyacylglutathione hydrolase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 223 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + ++VD G ++ LR L++ +L TH HADH GI + I V Sbjct: 24 HDGISALVVDPGDAQPTLEFLRANYLTLKGILITHHHADHTGGILTILE---NLGSEIPV 80 Query: 109 YAAP 112 Y Sbjct: 81 YGLA 84 >gi|10639780|emb|CAC11752.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 497 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 12/109 (11%) Query: 16 LGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD--------FYMQ 67 G P + W + RS+ +S + + +++ GPD + Sbjct: 170 SGPPMVGETWVRLTALGGHSEVGRSATLVSTKNSKVLIDCGMMNVGPDADPWDAAPYLYV 229 Query: 68 VLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + + +IDAV+ TH H DH L K VY P Sbjct: 230 PEVQPLSTIDAVILTHAHLDHSG----LLPLLFKYGYDGPVYMTPPTRD 274 >gi|88813346|ref|ZP_01128584.1| Metallo-beta-lactamase superfamily protein [Nitrococcus mobilis Nb-231] gi|88789404|gb|EAR20533.1| Metallo-beta-lactamase superfamily protein [Nitrococcus mobilis Nb-231] Length = 257 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%) Query: 43 KISRVSERGSNTTVIVDTG-PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 I + + +VD G PD ++ L+++ L + +L TH HADH+ GI L Sbjct: 15 YIWALHDAQKRRVCVVDPGDPDPVLRFLKQEKLELTGILATHHHADHVGGIARLV----- 69 Query: 102 QKRPIDVYAAPD 113 ++ P+ VY Sbjct: 70 KEHPVPVYGPAK 81 >gi|329766588|ref|ZP_08258131.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136843|gb|EGG41136.1| beta-lactamase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 421 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 59/186 (31%), Gaps = 29/186 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV------LREQVLSIDAVLYTHPHADHIHGI 92 RS ++ T +++D G F + L + +DA++ TH H DH + Sbjct: 14 RSGFLVNC-----DGTNLLLDYGVLFGKRGSPPEYPLHVKPKDLDAIIITHAHLDHSGNV 68 Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT--YPPIVNPIVIENNDVPI 150 L DVYA P K D P +N ++ ++ Sbjct: 69 PSL-----FVSGNTDVYATPPTFDLTRLLIEDMLKITKDAQPFGLPELNNMMRNAKEIGF 123 Query: 151 CMKSAGGVIEAIPILQQH----GRISSLGFRFGNVAYCTDVNA-----FPAESLEKLQNL 201 K G H G + + + Y D+ L+ ++ Sbjct: 124 REKVTKGNATFELRETGHVVGGGSVLVESQK-KRLFYTGDIKTNGSRMLREADLDV-GDI 181 Query: 202 DFLIID 207 D LII+ Sbjct: 182 DLLIIE 187 >gi|320527340|ref|ZP_08028525.1| metallo-beta-lactamase domain protein [Solobacterium moorei F0204] gi|320132364|gb|EFW24909.1| metallo-beta-lactamase domain protein [Solobacterium moorei F0204] Length = 201 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 15/112 (13%) Query: 76 IDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYP 135 +D ++ TH H+DH +D L + VY + + Y Sbjct: 46 VDGIVLTHGHSDHTGAVDDLCDVYNC-----PVYMDHHDLPLI------LPSNAGHYGYS 94 Query: 136 PIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDV 187 V + + N+ + + + I P G I R+ N+ + D Sbjct: 95 APVYASIHDLNEKQVKIGTFSLEIHHTPG-HTDGSICI---RYKNILFTGDT 142 >gi|226355290|ref|YP_002785030.1| metallo-beta-lactamase family protein [Deinococcus deserti VCD115] gi|226317280|gb|ACO45276.1| putative metallo-beta-lactamase superfamily protein, precursor [Deinococcus deserti VCD115] Length = 340 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 22/64 (34%), Gaps = 7/64 (10%) Query: 50 RGSNTTVIVDTGPDFYMQVLREQVLS-------IDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++DTG L + ID V TH H DHI G+ + Sbjct: 132 DTGRHRVLIDTGRGGESGQLANNLRRAGILPNTIDTVFITHGHGDHIGGLTRAGSPVFPR 191 Query: 103 KRPI 106 R + Sbjct: 192 ARHV 195 >gi|154493985|ref|ZP_02033305.1| hypothetical protein PARMER_03330 [Parabacteroides merdae ATCC 43184] gi|154086245|gb|EDN85290.1| hypothetical protein PARMER_03330 [Parabacteroides merdae ATCC 43184] Length = 270 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 12/126 (9%) Query: 57 IVDTGPDFYMQV--LREQVLSIDAVLYTHPHADHIHGIDGLRG--YFLKQKRPIDVYAAP 112 ++D G +Q+ +R + + + +H H DH G+ GL L + + V+ Sbjct: 1 MIDCGEGTQVQMRRMRVRFGRLAHIFISHLHGDHCFGLPGLISTLGMLGRTGELVVHGPK 60 Query: 113 DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRIS 172 + +L + ++ V ++ + M+ + +IP+ RI Sbjct: 61 EVETYLRPVMDLFCRGMEFE-----VRFNPVDTRSHSLVMEDRSLSVYSIPLKH---RIP 112 Query: 173 SLGFRF 178 + G+ F Sbjct: 113 TCGYLF 118 >gi|328553427|gb|AEB23919.1| ribonuclease J2 [Bacillus amyloliquefaciens TA208] gi|328911781|gb|AEB63377.1| ribonuclease J2 [Bacillus amyloliquefaciens LL3] Length = 555 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 31/169 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFK 127 L E+ + A+ TH H ++I G+ ++L K + VY + L E + Y Sbjct: 60 LVERADRVKAIFLTHGHDENIGGV-----FYLLNKLSVPVYGTKLTLALLREKLKQYGHN 114 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH------GRISSLG-FRFGN 180 D + I E+ V I +IP G I G F+F Sbjct: 115 RKADLREVHSKSVITFESTKVSF-----FKTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQ 169 Query: 181 V-AY--CTDVNAFPAESLEKLQNLDFLII-----DALKNGLHSSHFSLS 221 AY D+ K+ N L + +A + G S +S Sbjct: 170 TPAYHQSCDIGEI-----AKIGNSGVLALLSDSANAERPGYTPSEADVS 213 >gi|308173641|ref|YP_003920346.1| ribonuclease J2 [Bacillus amyloliquefaciens DSM 7] gi|307606505|emb|CBI42876.1| ribonuclease J2 [Bacillus amyloliquefaciens DSM 7] Length = 567 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 31/169 (18%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFR-YCFK 127 L E+ + A+ TH H ++I G+ ++L K + VY + L E + Y Sbjct: 72 LVERADRVKAIFLTHGHDENIGGV-----FYLLNKLSVPVYGTKLTLALLREKLKQYGHN 126 Query: 128 ALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH------GRISSLG-FRFGN 180 D + I E+ V I +IP G I G F+F Sbjct: 127 RKADLREVHSKSVITFESTKVSF-----FKTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQ 181 Query: 181 V-AY--CTDVNAFPAESLEKLQNLDFLII-----DALKNGLHSSHFSLS 221 AY D+ K+ N L + +A + G S +S Sbjct: 182 TPAYHQSCDIGEI-----AKIGNSGVLALLSDSANAERPGYTPSEADVS 225 >gi|302541700|ref|ZP_07294042.1| metallo-beta-lactamase superfamily protein [Streptomyces hygroscopicus ATCC 53653] gi|302459318|gb|EFL22411.1| metallo-beta-lactamase superfamily protein [Streptomyces himastatinicus ATCC 53653] Length = 214 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 48/164 (29%), Gaps = 26/164 (15%) Query: 77 DAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPP 136 DA+L TH H DH + + L ++ + +F + + Sbjct: 37 DAILVTHEHFDHFN--EERLRAALDANPAAQIWTLASVAGQISAAFPGRVHTVGEGD--- 91 Query: 137 IVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF-PAESL 195 + H I R NV Y D F P ++L Sbjct: 92 ------------TFTAAGFEVEVHGQLHAVIHPDIP----RITNVGYVVDGAVFHPGDAL 135 Query: 196 EKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTH 239 ++ L LH+ SE L + + P+ AI H Sbjct: 136 TVPDRP----VETLLLPLHAPWNKFSEILDYVREVAPRRAIDIH 175 >gi|295425153|ref|ZP_06817858.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] gi|295065212|gb|EFG56115.1| metallo-beta-lactamase superfamily protein [Lactobacillus amylolyticus DSM 11664] Length = 617 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 13/133 (9%) Query: 74 LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRT 133 + + TH HAD I + ++ +K I V+ + ++ + K L + Sbjct: 61 DRVAGIFLTHGHADSIGALP-----YILRKYDIPVFGSQLTIELAKIDVKRENKKLKNSL 115 Query: 134 YPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQH---GRISSLG-FRFGNVA---YCTD 186 + I I+ + I I + H G + G F+F A Y TD Sbjct: 116 FHVIDAHTEIDFKNASISFFHTTHSIADSLGIVVHTPAGEVVYTGDFKFDPSAAPNYRTD 175 Query: 187 VNAFPA-ESLEKL 198 ++ E+ L Sbjct: 176 MDRLAEIETKHVL 188 >gi|221483384|gb|EEE21703.1| hypothetical protein TGGT1_069860 [Toxoplasma gondii GT1] Length = 681 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 82/283 (28%), Gaps = 70/283 (24%) Query: 6 HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65 T+LG GA+ P R S L ++ + ++++D G Sbjct: 321 SLTLLGTGAAA----------------PSQYRNVSGLLVAIRKD----LSLVLDFGEGSL 360 Query: 66 MQV---------LREQVLSIDAVLYTHPHADHIHG---IDGLRGYFLKQKRPIDVYAAPD 113 Q+ + SI V +H HADH G + R + P + A Sbjct: 361 AQLYSMCHSWEEFLSVISSIRVVFISHCHADHHLGVCCLLEFRAAMFPELLPPLIIAPAK 420 Query: 114 CMKHLF------ESFRYCFKA--------LDDRTYPPIVNPIVIENNDVPICMKSAGGVI 159 L + F++ + + + G + Sbjct: 421 LQAWLRFYDCRVTRIPHRFRSTETIVCGLPETSREVEKNEERASAFRSMSHLLGVEAGDL 480 Query: 160 EAIPILQQHGRISSLGFRFG--------------NVAYCTDVNAFPAESL-EKLQNLDFL 204 +H S G R +V Y D P L + +N L Sbjct: 481 RLRATPVEH-IPHSFGLRVDFEIPASDANSRKDLSVVYSGDTR--PCRQLFDLARNATVL 537 Query: 205 I-----IDAL-KNGLHSSHFSLSESLKKIELINPKNAILTHMH 241 I DAL + + H SLSE ++ N +LTH Sbjct: 538 IHEATFEDALIQEAIEKRHSSLSEVVRGALDCRCANLVLTHFS 580 >gi|212639725|ref|YP_002316245.1| mRNA degradation ribonucleases J1/J2 [Anoxybacillus flavithermus WK1] gi|212561205|gb|ACJ34260.1| mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Anoxybacillus flavithermus WK1] Length = 555 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 34/154 (22%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +I+D G F L + +I + TH H DHI GI Sbjct: 30 EDEIIIIDAGIKFPEDELLGIDYVIPDYSYLVKNAENIKGLFITHGHEDHIGGIP----- 84 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGV 158 +L ++ + +Y + + L++ I I+ +DV + G Sbjct: 85 YLLRQVNVPIYGGKLALGLIRNK-------LEEHGLLRQTKLIEIKEDDV-----ISFGK 132 Query: 159 IEAIPILQQHGRISSLGFR----FGNVAYCTDVN 188 H S G G + + D Sbjct: 133 TAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFK 166 >gi|160933671|ref|ZP_02081059.1| hypothetical protein CLOLEP_02532 [Clostridium leptum DSM 753] gi|156867548|gb|EDO60920.1| hypothetical protein CLOLEP_02532 [Clostridium leptum DSM 753] Length = 317 Score = 43.6 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 23/215 (10%) Query: 52 SNTTVIVDTGPDFYMQVL-----REQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 + T+++D G + L ++ V ID ++ THPH DHI G+D + F + + Sbjct: 76 NGQTMLIDAGGNATADRLVEYIAKQGVKRIDFLIGTHPHEDHIGGLDKVIEAFDIGEIYL 135 Query: 107 DVYAAP-----DCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEA 161 A + + + ++ ++ + + A + + Sbjct: 136 PKVADSQVPTTRTYEDVLAAVDQKGLRVNRGAAGTVLFQRDELSARLLAPNSDAYDELNS 195 Query: 162 IPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLS 221 I+ + + G R + D A E L+ + D LK G H S S S Sbjct: 196 YSIVV----LLTYGER--KFLFMGD--AESDSEQEILERFGNVTADVLKCGHHGSSTSTS 247 Query: 222 ESLKKIELINPKNAILT---HMHVDLDYDMVLKST 253 ++ ++ ++P+ A+++ + L+ Sbjct: 248 QA--FLDRVSPEYAVISCGRDNSYGHPHQETLERL 280 >gi|307330506|ref|ZP_07609648.1| ComEC/Rec2-related protein [Streptomyces violaceusniger Tu 4113] gi|306883841|gb|EFN14885.1| ComEC/Rec2-related protein [Streptomyces violaceusniger Tu 4113] Length = 742 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Query: 51 GSNTTVIVDTGPDFY--MQVLRE-QVLSIDAVLYTHPHADHIHGI 92 G T V+VDTGP+ + LR V+ I ++ TH HADH+ G+ Sbjct: 506 GPGTAVVVDTGPEPRAVDRCLRSLGVVRIPLMVLTHFHADHVAGL 550 >gi|238791595|ref|ZP_04635233.1| Beta-lactamase domain protein [Yersinia intermedia ATCC 29909] gi|238729211|gb|EEQ20727.1| Beta-lactamase domain protein [Yersinia intermedia ATCC 29909] Length = 280 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 10/63 (15%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV---LREQV-------LSIDAVLYTHPHADHIHG 91 + I+ RG ++VD G + L + +D VL TH H DHI G Sbjct: 54 IHINCYLIRGLGRIILVDAGTGPLNNMAGQLNANLAAAGVSPDDVDTVLLTHCHPDHIGG 113 Query: 92 IDG 94 + Sbjct: 114 LLD 116 >gi|116872867|ref|YP_849648.1| metallo-beta-lactamase superfamily protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741745|emb|CAK20869.1| metallo-beta-lactamase superfamily protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 555 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 21/141 (14%) Query: 62 PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----H 117 PDF L E + A+ TH H D I + +L QK VY + Sbjct: 55 PDFKY--LEENKDRVKAIFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSA 107 Query: 118 LFESFRYCFKALD--DRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG 175 L E + FK D + I + + + G++ + G I G Sbjct: 108 LKEHRKLRFKNFHIVDSDTTLSFSKIDVSFFRTTHTIPDSVGIV----LETSEGSIIYTG 163 Query: 176 -FRFGNVA---YCTDVNAFPA 192 F+F A Y +D++ Sbjct: 164 DFKFDQSAKDGYASDLSHIAE 184 >gi|78221587|ref|YP_383334.1| hypothetical protein Gmet_0366 [Geobacter metallireducens GS-15] gi|78192842|gb|ABB30609.1| conserved hypothetical protein [Geobacter metallireducens GS-15] Length = 558 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 18/83 (21%) Query: 52 SNTTVIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + ++ D G F LRE+ + + TH H DHI + + Sbjct: 32 GDDIIVADCGLMFPEPHMLGIDIVIPDITYLRERADRVRGIFLTHGHEDHIGALPYVLPE 91 Query: 99 FLKQKRPIDVYAAPDCMKHLFES 121 P+ ++ + + E Sbjct: 92 L-----PVPIFGTALTLGFVREK 109 >gi|320335877|ref|YP_004172588.1| beta-lactamase domain-containing protein [Deinococcus maricopensis DSM 21211] gi|319757166|gb|ADV68923.1| beta-lactamase domain protein [Deinococcus maricopensis DSM 21211] Length = 553 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 65/220 (29%), Gaps = 45/220 (20%) Query: 50 RGSNTTVIVDTGPDF-------------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R + ++VD G F + L++ I + TH H DHI Sbjct: 32 RYGDEILLVDAGLAFPDSHQVGVDLIIPRIDYLQQHAGLIKGWVITHGHEDHIGSF---- 87 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 Y L + I +Y+A + L E D V+ IE P G Sbjct: 88 PYILPRLPRIPIYSAKLTLGLLREKLSEFGIKDSD------VDLREIE----PGERVQVG 137 Query: 157 GVIEAIPILQQHGRISSLGFR----FGNVAYCTD-----------VNAFPAESLEKLQNL 201 H ++G+ G V + D + + Sbjct: 138 RAFTVDTFRITHSIPDNMGYVLHTPVGRVVHTGDFKLDAHPADGRTSDLSKVAQAGQDGT 197 Query: 202 DFLIID---ALKNGLHSSHFSLSESLKKIELINPKNAILT 238 LI D A + G +S ++ +++ I +T Sbjct: 198 LLLISDSTNAERPGTTASESDVARNIEAIVKDARGRVFIT 237 >gi|307266050|ref|ZP_07547596.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918919|gb|EFN49147.1| beta-lactamase domain-containing protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 356 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 43/232 (18%) Query: 41 SLKISRVSERGSNTTVIVDTG-PDFYMQVLRE----QVLSIDAVLYTHPHADHIHGIDGL 95 S+ I S T+++D G P+ +V+ + ID ++ THPHADHI GI Sbjct: 85 SIFIQTPS----GKTMLIDAGVPEMGSRVVDFIKSRGINKIDILVGTHPHADHIGGI--- 137 Query: 96 RGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 ++ + Y K +D + I + Sbjct: 138 -PAVIENFQIGKFYMPKVTTTT---------KTFEDVLRAAKAKGLSINIAKAGVAFDL- 186 Query: 156 GGVIEAIPI---------LQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFLII 206 G + A I L + + L + + + D +A E + + D L Sbjct: 187 GSDVTAKMIAPNNTSYDDLNNYSAVIKLTYGNTSFLFTGDASAQSEEEMLS-KGYD-LKA 244 Query: 207 DALKNGLHSSHFSLSESLKKI--ELINPKNAILT---HMHVDLDYDMVLKST 253 D LK G H S S + + + ++PK A+++ + + ++ Sbjct: 245 DVLKVGHHGS----SSATTWVFLKAVSPKYAVISVGKNNDYGHPHKETMEKL 292 >gi|297299568|ref|XP_001083676.2| PREDICTED: beta-lactamase-like protein 2-like [Macaca mulatta] Length = 263 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 7/51 (13%) Query: 52 SNTTVIVDTGP-------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGL 95 +++DTG Q L E +I ++ TH H DH GI + Sbjct: 39 GPRRILIDTGEPAIPEYIRCLKQALTEFNTAIQEIVVTHWHHDHSGGIGDI 89 >gi|261368118|ref|ZP_05981001.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] gi|282569876|gb|EFB75411.1| metallo-beta-lactamase family protein [Subdoligranulum variabile DSM 15176] Length = 292 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 20/153 (13%) Query: 57 IVDTGPDFYM-----QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 ++D+G D Q+L + A+ TH +ADHI G + + I YA Sbjct: 32 LIDSGNDKDAGRKVRQLLDANGWHLTAIYNTHSNADHIGG---NKYLQAQTGCRI--YAP 86 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVI----ENNDVPICMKSAGGVIEAIPILQQ 167 ++ F A YP E++ P+ ++ E IP+ Sbjct: 87 G--IECGFTRHPVLEPAFLYGGYPCKDLRHKFLMAQESSAEPLTREALPAGWELIPLPGH 144 Query: 168 HGRISSLGFRF-GNVAYCTDVNAFPAESLEKLQ 199 + +GFR NV Y D + E+L+K Q Sbjct: 145 FFSM--VGFRTPENVVYLADCLS-SRETLDKYQ 174 >gi|163943266|ref|YP_001642496.1| beta-lactamase domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|163865463|gb|ABY46521.1| beta-lactamase domain protein [Bacillus weihenstephanensis KBAB4] Length = 657 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHLFESFRYCFKALDD 131 + +I A++ +H H DH G++G+ + +++ P I +YA +H Y A+ Sbjct: 150 IGNIRAIIMSHSHVDHFGGVNGI--FTYEEQNPDIPIYAPKGFTEHAVSENIYAGNAMAR 207 Query: 132 R 132 R Sbjct: 208 R 208 >gi|312899877|ref|ZP_07759195.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0470] gi|311292873|gb|EFQ71429.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0470] Length = 723 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 513 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 567 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N + + S GG ++I Q LG R + + Sbjct: 568 KSGTDCRPILAPKRI-NGPISFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 618 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 619 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 670 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 671 GLNNRFKHPHQETLATL 687 >gi|304405663|ref|ZP_07387322.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] gi|304345702|gb|EFM11537.1| beta-lactamase domain protein [Paenibacillus curdlanolyticus YK9] Length = 232 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 31/108 (28%), Gaps = 23/108 (21%) Query: 75 SIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTY 134 +DAVL TH HADH PI + HL + Sbjct: 40 KVDAVLITHGHADHTL---DAVSIAKNNNCPI--VTTYELALHLAK-------------- 80 Query: 135 PPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA 182 I + G ++ P G + GF +G VA Sbjct: 81 ----QGAAIHPMGIGGAFNFPWGRVKFTPAWHSTGIETENGFIYGGVA 124 >gi|295093708|emb|CBK82799.1| Metal-dependent hydrolases of the beta-lactamase superfamily III [Coprococcus sp. ART55/1] Length = 266 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 76/259 (29%), Gaps = 53/259 (20%) Query: 5 YHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPD- 63 T+LG G++L V + +VD G Sbjct: 1 MDITMLGTGSAL-VTECYNTC---------------------FVLSDGDEHFLVDGGGGN 38 Query: 64 -FYMQVLREQV--LSIDAVLYTHPHADHIHG-IDGLRGYFLKQKR-----PIDVYAAPDC 114 Q+ + + + TH H DHI G + +R K+ +Y + Sbjct: 39 GILSQLKKAGFNWQDMSTIFVTHKHVDHILGAVWMIRMICQHMKKGSYEGEAVIYGHDEV 98 Query: 115 MKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSL 174 + L E + T ++E ND + G + + Sbjct: 99 IALLREMAMQLLNKKE--TVYIGDRLHLVEVNDGD-TKEIMGRKVTF--FDTGSTKTKQF 153 Query: 175 GFR--FGNVAYCTDVNAFP--AESLEKLQNLDFLIIDAL----------KNGLHSSHFSL 220 GF G+ A T P + + +L+ +A H H ++ Sbjct: 154 GFCMDMGDGAKITCCGDEPYNDCEEKYARGSKWLLHEAFCLYSEADIFDPYEKH--HSTV 211 Query: 221 SESLKKIELINPKNAILTH 239 ++ + E + +N +L H Sbjct: 212 KDACELAEKLEVQNLLLYH 230 >gi|294815935|ref|ZP_06774578.1| Pyrroloquinoline quinone biosynthesis protein B [Streptomyces clavuligerus ATCC 27064] gi|326444274|ref|ZP_08219008.1| pyrroloquinoline quinone biosynthesis protein PqqB [Streptomyces clavuligerus ATCC 27064] gi|294328534|gb|EFG10177.1| Pyrroloquinoline quinone biosynthesis protein B [Streptomyces clavuligerus ATCC 27064] Length = 301 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 33/99 (33%), Gaps = 11/99 (11%) Query: 7 FTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYM 66 +LG A G+P+ C R R S + G+ +V+ PD Sbjct: 3 LQVLGTAAGGGLPQWNCACPGCTGARTHPHRRRRHA--SLAVQAGAGRWFLVNATPDIGD 60 Query: 67 Q-----VLREQVL----SIDAVLYTHPHADHIHGIDGLR 96 Q LR + VL T DH GI LR Sbjct: 61 QIEDSHALRPGPGPRQTPVAGVLLTDAELDHTLGIARLR 99 >gi|256956724|ref|ZP_05560895.1| competence protein ComEC [Enterococcus faecalis DS5] gi|256947220|gb|EEU63852.1| competence protein ComEC [Enterococcus faecalis DS5] Length = 719 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 509 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 563 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N + + S GG ++I Q LG R + + Sbjct: 564 KSGTDCRPILAPKRI-NGPISFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 614 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 615 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 666 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 667 GLNNRFKHPHQETLATL 683 >gi|302529639|ref|ZP_07281981.1| predicted protein [Streptomyces sp. AA4] gi|302438534|gb|EFL10350.1| predicted protein [Streptomyces sp. AA4] Length = 314 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 64/208 (30%), Gaps = 34/208 (16%) Query: 37 RTRSSLKISRVSE-RGSNTTVIVDTGPDFYMQV-LREQVLSIDAV------LYTHPHADH 88 R+ S +S RG ++VDT + L V V + TH H H Sbjct: 23 RSPSDWMVSNCGWIRGREGVLLVDTCGTERDTLDLVSDVRKYSTVEMPLTLVLTHAHGTH 82 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYC----FKALDDRTYPPIVNPIVIE 144 +G G L+ I A + S C F + P + Sbjct: 83 HNG----AGVALRNGGRI---LAAPTAVPIIRSGPQCDEEIFACANWGKLEA-PRPEAVH 134 Query: 145 NNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQNLDFL 204 P+ + G V+E +P G + G D+ F + D L Sbjct: 135 AVIEPVEVDLGGVVVEVVPFP---GTAHTDG----------DLVLFEPRTGTLFTG-DLL 180 Query: 205 IIDALKNGLHSSHFSLSESLKKIELINP 232 + + +H S +L ++ + P Sbjct: 181 SVGSTPFAVHGSIPGWLTALDWLDKMFP 208 >gi|300861261|ref|ZP_07107348.1| DNA internalization competence protein ComEC/Rec2-like protein [Enterococcus faecalis TUSoD Ef11] gi|300850300|gb|EFK78050.1| DNA internalization competence protein ComEC/Rec2-like protein [Enterococcus faecalis TUSoD Ef11] gi|315035756|gb|EFT47688.1| DNA internalization-related competence protein ComEC/Rec2 [Enterococcus faecalis TX0027] Length = 709 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 36/197 (18%) Query: 71 EQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALD 130 + V +D V+ TH H DH + + QK PI V P SFR K L Sbjct: 499 QGVKRLDEVIITHAHEDHFGDL-----LAIAQKVPISVLYFPKGAAEANFSFRQVLKQLQ 553 Query: 131 DRTY--PPIVNPIVIENNDVPICMKSA-----GGVIEAIPILQQHGRISSLGFRFGNVAY 183 PI+ P I N + + S GG ++I Q LG R + + Sbjct: 554 KSGTDCRPILAPKRI-NGPISFQILSPNKSSIGGNNDSIVFSTQ------LGGR--HFLF 604 Query: 184 CTDVNAFPAES----LEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILT- 238 D+ A E +L+ ID LK G H S S ++ + I+ +NP+ A+++ Sbjct: 605 TGDLEAEGEEQVLARYPQLK------IDILKVGHHGSKTSSTK--RFIKQLNPREALISA 656 Query: 239 --HMHVDLDYDMVLKST 253 + + L + Sbjct: 657 GLNNRFKHPHQETLATL 673 >gi|229031910|ref|ZP_04187897.1| Metallo-beta-lactamase [Bacillus cereus AH1271] gi|228729374|gb|EEL80364.1| Metallo-beta-lactamase [Bacillus cereus AH1271] Length = 239 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E+ L AVL TH H DHI +D +R F Sbjct: 46 YILTNDQNECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFH--- 102 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 103 --IPVYVHKE 110 >gi|229075966|ref|ZP_04208942.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] gi|229104891|ref|ZP_04235550.1| Metallo-beta-lactamase [Bacillus cereus Rock3-28] gi|229117758|ref|ZP_04247127.1| Metallo-beta-lactamase [Bacillus cereus Rock1-3] gi|228665735|gb|EEL21208.1| Metallo-beta-lactamase [Bacillus cereus Rock1-3] gi|228678521|gb|EEL32739.1| Metallo-beta-lactamase [Bacillus cereus Rock3-28] gi|228707281|gb|EEL59478.1| Metallo-beta-lactamase [Bacillus cereus Rock4-18] Length = 239 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E+ L AVL TH H DHI +D +R F Sbjct: 46 YILTNDQNECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFH--- 102 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 103 --IPVYVHKE 110 >gi|146304363|ref|YP_001191679.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM 5348] gi|145702613|gb|ABP95755.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348] Length = 421 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 71/203 (34%), Gaps = 32/203 (15%) Query: 39 RSSLKISRVSERGSNTTVIVDTGPDFYMQV-----LREQVLSIDAVLYTHPHADHIHGID 93 R+ ++IS SE ++I+D G +F + L+E + + +H H DH+ + Sbjct: 16 RAGIEISNSSE-----SLILDYGVNFNQKDEPNFPLQESPSKVKGFVVSHAHLDHVGALP 70 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMK 153 Y + + VY K++ E F L P + ++ Sbjct: 71 ---IYQISSSK--PVYGTG-ISKYITELMLKDFIKLSGPKVP--FEWVEVKKTMDNFRTF 122 Query: 154 SAGGVIEAIPILQQH---GRISSLGFRF-----GNVAYCTDVN-----AFPAESLEKLQN 200 + G +E G I G++AY D+N LE ++ Sbjct: 123 NYGEEVEIGGFTVTTSSAGHIPGSAITVVKTEKGDIAYTGDINVTMAKLVKPAELEVMRK 182 Query: 201 LDFLIIDALKNGL-HSSHFSLSE 222 +I +A H + S+ E Sbjct: 183 SRVIITEATYGKFNHPTRKSVEE 205 >gi|29829057|ref|NP_823691.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces avermitilis MA-4680] gi|29606163|dbj|BAC70226.1| putative hydrolase of the metallo-beta-lactamase superfamily [Streptomyces avermitilis MA-4680] Length = 561 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 22/124 (17%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 +R+++ I+ ++ TH H DHI G+ + L++K I + + + + Sbjct: 70 IRDRLDDIEGIVLTHGHEDHIGGV----PFLLREKPDIPLIGSKLTLALI---------- 115 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYC 184 + + + P +E + + G + + H +L G V + Sbjct: 116 -EAKLQEHRIRPYTLEVAEGN---RERIGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHT 171 Query: 185 TDVN 188 D Sbjct: 172 GDFK 175 >gi|159118627|ref|XP_001709532.1| Metal-dependent hydrolase [Giardia lamblia ATCC 50803] gi|157437649|gb|EDO81858.1| Metal-dependent hydrolase [Giardia lamblia ATCC 50803] Length = 334 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 12/140 (8%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLREQV--LSIDAVLYTHPHADHIHGIDGL-R 96 + + +I D Y+++L+ + + V+ +H H DH+ G+ L Sbjct: 25 CGILVEY----SPKHYLIYDCPEGTYVKLLQYNILLSCLHYVVISHMHPDHMAGLLTLIS 80 Query: 97 GYFLKQKRPID-VYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSA 155 G + +Y +K+L + L +R P + I I + +A Sbjct: 81 GLSEICGGSLPSIYGPQALVKYLEVALP--LTDLAERFSRP-LKLIPIAPFQTLSSVITA 137 Query: 156 GGVIEAIPILQQHGRISSLG 175 G I H RI G Sbjct: 138 DGPWSFIFFPLAH-RIECHG 156 >gi|323701886|ref|ZP_08113556.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum nigrificans DSM 574] gi|323533190|gb|EGB23059.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum nigrificans DSM 574] Length = 554 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 21/146 (14%) Query: 50 RGSNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLR 96 R V++D G F + L E + +L TH H DHI + Sbjct: 26 RFGENIVLIDCGLMFPEEEMLGIDIVIPDITYLLENKELVRGILLTHGHEDHIGAL---- 81 Query: 97 GYFLKQKRPIDVYAAPDCMKHLFESF--RYCFKALDDRTYPPIVNPIVIENNDVPICMKS 154 Y LKQ + VY + + + + T P + I + Sbjct: 82 PYVLKQIN-VPVYGSKLALGLVQGKLKEHNILDEVKLYTVKPRDTVHIGPFKVEFIRVSH 140 Query: 155 AGGVIEAIPILQQHGRISSLG-FRFG 179 + A+ I G + G F+ Sbjct: 141 SIPDAMALAIHTPVGTVLHTGDFKID 166 >gi|319955819|ref|YP_004167082.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] gi|319418223|gb|ADV45333.1| RNA-metabolising metallo-beta-lactamase [Nitratifractor salsuginis DSM 16511] Length = 692 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 18/113 (15%) Query: 52 SNTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 +I+D G F + L I A++ TH H DHI + Y Sbjct: 165 EKDAIIIDVGMSFPDETMHGVDILVPDFSYLHAIKDKIRAIVITHAHEDHIGAV----PY 220 Query: 99 FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPIC 151 K+ + +Y P + + F D + + +V + + + I Sbjct: 221 LFKELK-FPIYGTPLALAMIGNKFDEHGLQADKKYFRYVVKRKIYDIGEFKIE 272 >gi|229157873|ref|ZP_04285948.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] gi|228625830|gb|EEK82582.1| Metallo-beta-lactamase [Bacillus cereus ATCC 4342] Length = 239 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 46 RVSERGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + N +I D G + + L+E+ L AVL TH H DHI +D +R F Sbjct: 46 YILTNDQNECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFH--- 102 Query: 104 RPIDVYAAPD 113 I VY + Sbjct: 103 --IPVYVHKE 110 >gi|254478890|ref|ZP_05092253.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035156|gb|EEB75867.1| RNA-metabolising metallo-beta-lactamase family protein [Carboxydibrachium pacificum DSM 12653] Length = 541 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 12/80 (15%) Query: 52 SNTTVIVDTG--------PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 N +VD G + Q + ID VL TH H DH I K+ Sbjct: 22 ENARFLVDCGMFQGGEVEDELNYQEFIFDIKDIDFVLLTHAHIDHSGRI----PVLYKRG 77 Query: 104 RPIDVYAAPDCMKHLFESFR 123 +YA + Sbjct: 78 YRKRIYATHATVDLCRYMLP 97 >gi|184201236|ref|YP_001855443.1| hypothetical protein KRH_15900 [Kocuria rhizophila DC2201] gi|183581466|dbj|BAG29937.1| hypothetical protein [Kocuria rhizophila DC2201] Length = 564 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFES 121 +R+++ I A++ TH H DHI + Y LK++ I V + + + Sbjct: 71 IRDRIDDIVAIVLTHGHEDHIGAV----PYLLKRRPDIPVIGSQLTLALIEAK 119 >gi|53749416|gb|AAU90274.1| hypothetical protein [Oryza sativa Japonica Group] Length = 71 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Query: 200 NLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVLKSTPS 255 LD LI++ N LH +L ++ I+PK A+L M + ++ ++ Sbjct: 11 QLDLLILET--NTLHGK------TLDAVKRISPKRALLIGMRHEFEHYRENQNLAE 58 >gi|262392548|ref|YP_003284402.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. Ex25] gi|262336142|gb|ACY49937.1| metallo-beta-lactamase family protein RNA-specific [Vibrio sp. Ex25] Length = 441 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 14/77 (18%) Query: 50 RGSNTTVIVDTGP----------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R ++++D G + + + + A++ TH H DHI + L Sbjct: 20 RLEQGSILIDCGLFQGKDALVGRNDRSLAIEFPLTKVKALVLTHAHIDHIGRLPWLLAAG 79 Query: 100 LKQKRPIDVYAAPDCMK 116 K K +Y + Sbjct: 80 FKGK----IYCTQATAE 92 >gi|89092852|ref|ZP_01165804.1| hydrolase, putative [Oceanospirillum sp. MED92] gi|89082877|gb|EAR62097.1| hydrolase, putative [Oceanospirillum sp. MED92] Length = 306 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 20/77 (25%) Query: 52 SNTTVIVDTGPDFYM-QVLREQVLS-----IDAVLYTHPHADHIHG---IDGLRGYFLKQ 102 +++DTGP + +R + S I V TH H DH G D Sbjct: 62 GEGVIVIDTGPSLRYGKAMRALIESKTSQPIRMVFNTHHHPDHFLGNQAFDD-------- 113 Query: 103 KRPIDVYAAPDCMKHLF 119 I +Y+ P K++ Sbjct: 114 ---IPIYSLPQTQKYIK 127 >gi|308173418|ref|YP_003920123.1| ribonuclease J1 [Bacillus amyloliquefaciens DSM 7] gi|307606282|emb|CBI42653.1| ribonuclease J1 [Bacillus amyloliquefaciens DSM 7] gi|328553652|gb|AEB24144.1| ribonuclease J1 [Bacillus amyloliquefaciens TA208] gi|328911502|gb|AEB63098.1| ribonuclease J1 [Bacillus amyloliquefaciens LL3] Length = 555 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ +I +D+ K++ Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLNIIGEDDIVKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|291302591|ref|YP_003513869.1| beta-lactamase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290571811|gb|ADD44776.1| beta-lactamase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 577 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 62/191 (32%), Gaps = 40/191 (20%) Query: 51 GSNTTVIVDTGPD----FYMQVLREQVLSI-----DAVLYTHPHADHIHGIDGLRGYFLK 101 G T ++VD G + + + DA++ TH H DH + Sbjct: 156 GGGTRLLVDAGTRPSGVDEDSLAPADIAEVYAEPPDAIVVTHAHNDHAG----WVPALVN 211 Query: 102 QKRPIDVYAAPDCMKHLFESFRY-----CFKALDDRTY-----PPI----VNPIVIENND 147 + + V+A+ L + FKA D ++ PP V+ V D Sbjct: 212 RFPNLPVFASTATCDLLGTMWADSAKVLAFKADTDESWAGGPLPPYKQSDVDAAVAALID 271 Query: 148 VPICMKSAGGVIEAIPILQQH-----GRISSLGFRFGNVAYCTDVNAFPAESLEKLQ--- 199 VP+ G + H G + + G V DV+ S+ L Sbjct: 272 VPVGHPRRVGALSFELFDAGHIIGATGVVVTAGD--QRVVVSGDVSGPGQLSVGGLHLPD 329 Query: 200 ---NLDFLIID 207 D L+++ Sbjct: 330 AGVGADLLLLE 340 >gi|157376097|ref|YP_001474697.1| beta-lactamase domain-containing protein [Shewanella sediminis HAW-EB3] gi|157318471|gb|ABV37569.1| beta-lactamase domain protein [Shewanella sediminis HAW-EB3] Length = 526 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 10/80 (12%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 SSL I +G+ T G Q+ + + SI A+L TH H DH+ I L Sbjct: 31 SSLLIDCGLFQGAET-----AGSSNAEQLKIAFDIGSITALLVTHCHIDHVGRIPYLLAA 85 Query: 99 FLKQKRPIDVYAAPDCMKHL 118 Q ++A L Sbjct: 86 GFDQ----PIFATTATAALL 101 >gi|116250970|ref|YP_766808.1| metallo-beta-lactamase family methyl parathion hydrolase [Rhizobium leguminosarum bv. viciae 3841] gi|115255618|emb|CAK06699.1| putative metallo-beta-lactamase family methyl parathion hydrolase [Rhizobium leguminosarum bv. viciae 3841] Length = 330 Score = 43.6 bits (102), Expect = 0.029, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 13/67 (19%) Query: 39 RSS---LKISRVSERGSNTTVIVDTGP-------DFYMQVLRE---QVLSIDAVLYTHPH 85 R S ++ +++D GP Q L Q IDAV+ TH H Sbjct: 96 RPSGVRFLFNQYLVDDGERRILIDAGPAGSIGQTGELPQALSALGLQRDQIDAVIVTHMH 155 Query: 86 ADHIHGI 92 DH+ G+ Sbjct: 156 QDHMGGL 162 >gi|260549311|ref|ZP_05823531.1| beta-lactamase superfamily hydrolase [Acinetobacter sp. RUH2624] gi|260407717|gb|EEX01190.1| beta-lactamase superfamily hydrolase [Acinetobacter sp. RUH2624] Length = 320 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 31/198 (15%) Query: 54 TTVIVDTGP---------DFYMQVLREQVL--SIDAVLYTHPHADHIHGI--DGLRGY-- 98 +++D G + + V ID +L TH H DH+ GI DG Y Sbjct: 98 QNILIDAGTAKCFGPTLGHVPENLKKAGVQPEQIDTILITHAHPDHLCGITFDGKMVYPN 157 Query: 99 --FLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAG 156 K +D + + + F+ FK D P ++ + + Sbjct: 158 AKVYLAKEDVDFWTSSANEAKATDFFKPIFKMTRDALQPYQKAGQLVAFTKSSFNVPNVQ 217 Query: 157 GVIEAIPILQQHGRISSLGFRFGNVAYCTDVNA-------FPAESLEKLQNLDFLIIDAL 209 ++ + H G DV +P S + + I A+ Sbjct: 218 LIVTH-GHTEGHSSYLVDGKNGQKFLGLGDVVHYGAVQFPYPEASYKPDTDSKLAI--AV 274 Query: 210 K----NGLHSSHFSLSES 223 + + +H+ + + Sbjct: 275 RKDIFEQAYKNHWWIGAA 292 >gi|297588305|ref|ZP_06946948.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] gi|297573678|gb|EFH92399.1| metallo-beta-lactamase [Finegoldia magna ATCC 53516] Length = 555 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 18/82 (21%) Query: 53 NTTVIVDTGPDFYMQ-------------VLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 + ++VD G F + L + I ++ TH H DHI I Y Sbjct: 31 DDIIVVDCGMTFPDEEMLGVDIVIPDISYLEKNKEKIRGIVITHGHEDHIGAI----PYV 86 Query: 100 LKQKRPIDVYAAPDCMKHLFES 121 LK K + VY M L Sbjct: 87 LK-KLDVPVYGTKLTMGLLENK 107 >gi|224371416|ref|YP_002605580.1| putative Metal-dependent hydrolase [Desulfobacterium autotrophicum HRM2] gi|223694133|gb|ACN17416.1| putative Metal-dependent hydrolase [Desulfobacterium autotrophicum HRM2] Length = 249 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 11/87 (12%) Query: 40 SSLKISRVSERGSNTTVIVDTGPDFYMQVLRE------QVLSIDAVLYTHPHADHIHGID 93 +SL + N T++ DTG + ++ +LR V +ID + +HPH DHI G+D Sbjct: 22 TSLWGFSAFLQLPNHTILFDTGSNGHV-LLRNIQTSGLNVKNIDTLFISHPHWDHIGGVD 80 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFE 120 + + ++A K L Sbjct: 81 SVIEENPN----LHIFAPDSLSKFLLN 103 >gi|254229442|ref|ZP_04922857.1| RNA-metabolising metallo-beta-lactamase family [Vibrio sp. Ex25] gi|151938013|gb|EDN56856.1| RNA-metabolising metallo-beta-lactamase family [Vibrio sp. Ex25] Length = 466 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 14/77 (18%) Query: 50 RGSNTTVIVDTGP----------DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 R ++++D G + + + + A++ TH H DHI + L Sbjct: 45 RLEQGSILIDCGLFQGKDALVGRNDRSLAIEFPLTKVKALVLTHAHIDHIGRLPWLLAAG 104 Query: 100 LKQKRPIDVYAAPDCMK 116 K K +Y + Sbjct: 105 FKGK----IYCTQATAE 117 >gi|222053589|ref|YP_002535951.1| beta-lactamase domain protein [Geobacter sp. FRC-32] gi|221562878|gb|ACM18850.1| beta-lactamase domain protein [Geobacter sp. FRC-32] Length = 276 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 58/202 (28%), Gaps = 38/202 (18%) Query: 42 LKISRVSERGSNTTVIVDTGPD----FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRG 97 I S +++ DTG Q ++ + +D V +H H DH G+ L Sbjct: 27 ALIETAS-----GSLLFDTGQGATLLHNAQRMQRDLRRVDKVAISHGHYDHTGGLWPLLQ 81 Query: 98 YFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGG 157 + ++ VY F + D I P E + Sbjct: 82 WCGPKR----VYGHE-------GIFAGRYTLRDGEKGRSIGMPYSREFLEGQGASFDLDA 130 Query: 158 VI-EAIPILQQHGRISS-LGFRFGNVAYCTDVNA-----FPAESLEKL---QNLDFLIID 207 E P + G + F G+ D P + L + L L++ Sbjct: 131 SFREIAPDIFLSGEVPRKQAFEQGDTGLFCDAAGCIPDQVPDDQSLVLKTGKGL-VLVLG 189 Query: 208 ALKNGLHSSHFSLSESLKKIEL 229 H + +L+ + Sbjct: 190 C-------CHSGMINTLELVRE 204 >gi|319776158|ref|YP_004138646.1| hydroxyacylglutathione hydrolase [Haemophilus influenzae F3047] gi|317450749|emb|CBY86969.1| predicted hydroxyacylglutathione hydrolase [Haemophilus influenzae F3047] Length = 185 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 56 VIVDTGP-DFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDC 114 +IVD D L +Q +I+AVL TH H DH G+ F K+ + +Y +C Sbjct: 24 IIVDLPETDKLFAWLDKQNATIEAVLLTHEHDDHTQGV----SAFKKRYPTVPIYGPQEC 79 Query: 115 MK 116 K Sbjct: 80 EK 81 >gi|312862837|ref|ZP_07723077.1| ribonuclease J 2 [Streptococcus vestibularis F0396] gi|311101697|gb|EFQ59900.1| ribonuclease J 2 [Streptococcus vestibularis F0396] Length = 553 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L E I + TH HAD I + ++ Q V+ + ++ L + F Sbjct: 55 LIENRDRIQGIFLTHGHADAIGALP-----YILQDVKAPVFGSSLTIE-LAKLF------ 102 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVN 188 + + N VI+ + I + A LG GN+ Y D Sbjct: 103 VKNAGVKKFNNFHVIDA-ETEIEFEDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFK 161 >gi|228967325|ref|ZP_04128360.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] gi|228792360|gb|EEM39927.1| Metallo-beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001] Length = 191 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 7/66 (10%) Query: 50 RGSNTTVIVDTGPD--FYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 +I D G + + L+E+ L AVL TH H DHI +D +R F I Sbjct: 2 NDQKECIIFDPGHEGEKLVTYLQEEQLKPLAVLLTHAHFDHIGAVDAVRDAFY-----IP 56 Query: 108 VYAAPD 113 VY + Sbjct: 57 VYVHKE 62 >gi|150400309|ref|YP_001324076.1| beta-lactamase domain-containing protein [Methanococcus vannielii SB] gi|150013012|gb|ABR55464.1| beta-lactamase domain protein [Methanococcus vannielii SB] Length = 635 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 20/94 (21%) Query: 39 RSSLK-------ISRVSERGSNTTVIVDTGPDF---------YMQVLREQVLSIDAVLYT 82 R+S + + + + ++VD G + + + IDAV+ T Sbjct: 181 RTSFLGGSREVGRTCIYHQTPESRILVDCGINIAVDDEKAFPHFDAPEFSIDEIDAVVVT 240 Query: 83 HPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H H DH + VY Sbjct: 241 HAHLDHCG----FIPGLFRYGYDGPVYCTKPTRD 270 >gi|221064697|ref|ZP_03540802.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] gi|220709720|gb|EED65088.1| beta-lactamase domain protein [Comamonas testosteroni KF-1] Length = 452 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Query: 52 SNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIH 90 NT +++D G + Q L + IDAV+ TH H DH Sbjct: 23 GNTRILIDCGLFQGLKNLRELNWQRLAVEPKDIDAVVLTHAHLDHCG 69 >gi|33593589|ref|NP_881233.1| hypothetical protein BP2609 [Bordetella pertussis Tohama I] gi|33572945|emb|CAE42885.1| conserved hypothetical protein [Bordetella pertussis Tohama I] Length = 452 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 50 RGSNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLK 101 R +T ++VD G + Q L IDAV+ TH H DH + L + Sbjct: 21 RHGDTRLLVDCGLFQGLKNLRELNWQPLPVAPADIDAVVLTHAHLDHCGYLPRLVAEGFR 80 Query: 102 QKRPIDVYAAPDCMK 116 + ++A P Sbjct: 81 GR----IHATPATRD 91 >gi|186681331|ref|YP_001864527.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186463783|gb|ACC79584.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102] Length = 590 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 19/81 (23%) Query: 52 SNTTVIVDTGPDFYMQV-------------LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + +++D G F + LRE I ++ TH H DHI GI + Sbjct: 32 DDEIILLDAGLAFPTEAMHGVNIVLPDTTYLRENRHKIKGMIVTHGHEDHIGGI----AF 87 Query: 99 FLKQKRPID-VYAAPDCMKHL 118 LKQ I +Y M L Sbjct: 88 HLKQF-DIPVIYGPRLAMAML 107 >gi|320101459|ref|YP_004177051.1| KH-domain/beta-lactamase-domain-containing protein [Desulfurococcus mucosus DSM 2162] gi|319753811|gb|ADV65569.1| KH-domain/beta-lactamase-domain protein [Desulfurococcus mucosus DSM 2162] Length = 647 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 20/89 (22%) Query: 39 RSSLKISRVSERGSNTTVIVDTG--------PDFYMQVLR---EQVLSIDAVLYTHPHAD 87 RSS+ + + V++D G P +L ++ +D V+ TH H D Sbjct: 201 RSSILVET-----RESKVLLDLGINTGAIDDPGKAYPLLEVDSLRLDELDGVIVTHAHLD 255 Query: 88 HIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 H+ L K VY + Sbjct: 256 HVG----LVPVLYKYGYRGPVYVTKPTRE 280 >gi|292670649|ref|ZP_06604075.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] gi|292647676|gb|EFF65648.1| metallo-beta-lactamase [Selenomonas noxia ATCC 43541] Length = 536 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 12/80 (15%) Query: 52 SNTTVIVDTGPDFYMQVLRE--------QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 + +VD G + LRE I+AV TH H DH I L + K Sbjct: 22 GDHRYLVDCGMYQGTRRLREMNYEEFPFNPAEIEAVFLTHAHIDHCGRIPRLVREGFRGK 81 Query: 104 RPIDVYAAPDCMKHLFESFR 123 VYA + Sbjct: 82 ----VYATQSTCDLVRIMLP 97 >gi|290961071|ref|YP_003492253.1| cobalamin biosynthesis protein [Streptomyces scabiei 87.22] gi|260650597|emb|CBG73713.1| putative cobalamin biosynthesis protein [Streptomyces scabiei 87.22] Length = 397 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 10/79 (12%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFYMQV 68 +LG GA G+PR AC R ++L + + ++++D P + Sbjct: 1 MLGTGAPAGLPRPDCPCAACATALGDAARGATALLV--------DGSLLLDLTPGAALAA 52 Query: 69 LREQ--VLSIDAVLYTHPH 85 R + + VL +HPH Sbjct: 53 ARAGHSLTGVRQVLLSHPH 71 >gi|269126147|ref|YP_003299517.1| beta-lactamase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311105|gb|ACY97479.1| beta-lactamase domain protein [Thermomonospora curvata DSM 43183] Length = 652 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 80/224 (35%), Gaps = 41/224 (18%) Query: 40 SSLKISRVSERGSNTTVIVDTG--PDFYMQVLREQVLSI----DAVLYTHPHADHI---- 89 S L + +T+++VD G P Q R+ ++ +AV+ TH H DH Sbjct: 236 SCLLVEA-----GDTSLLVDAGIRPGTPPQPPRDVAEALTARPEAVIVTHAHNDHCGYVP 290 Query: 90 ---HGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPI-----VNPI 141 H + LR + + D +K + + A ++ P+ V+ Sbjct: 291 ALAHRLPRLRIIATPESCRLMPVMWQDALKVMRR---HTAGASSGGSWTPLYEQDAVDVA 347 Query: 142 VIENNDVPICMKSAGGVIEAIPILQQH-----GRISSLGFRFGNVAYCTDVNAFPAESL- 195 + ++P G + H G + S G R V D++ F S+ Sbjct: 348 MERLEELPTGAPRRVGDLTVELFPAGHILGAAGAVISAGER--RVVVTGDISGFRQASVD 405 Query: 196 -----EKLQNLDFLIIDAL-KNGLHSSH-FSLSESLKKIELINP 232 + + D L++++ H H + E L +E ++ Sbjct: 406 GYRLPDGARGADLLVLESTCCGEEHGDHRARVGELLGIVEEVHA 449 >gi|154685860|ref|YP_001421021.1| YkqC [Bacillus amyloliquefaciens FZB42] gi|154351711|gb|ABS73790.1| YkqC [Bacillus amyloliquefaciens FZB42] Length = 555 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 V++D G F L + I + TH H DHI GI +L + Sbjct: 34 VLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ +I +D+ K++ Sbjct: 89 QVNIPVYGGKLAIGLLRNK-------LEEHGLLRQTKLNIIGEDDIVKFRKTS-----VS 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G GN+ + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGNIVHTGDFK 166 >gi|281357188|ref|ZP_06243677.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] gi|281316219|gb|EFB00244.1| beta-lactamase domain protein [Victivallis vadensis ATCC BAA-548] Length = 276 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 11/68 (16%) Query: 36 RRT----RSSLKISRVSERGSNTTVIVDTG-PDFYMQVLRE------QVLSIDAVLYTHP 84 RR R+ ++ + ++VD G +LR+ ID +L TH Sbjct: 56 RRLAGAQRAPSSVNVFVLKRGGKLILVDAGNGGKRGAMLRKLEQDGIPPEKIDCILLTHM 115 Query: 85 HADHIHGI 92 H DHI G+ Sbjct: 116 HGDHIGGL 123 >gi|94970916|ref|YP_592964.1| beta-lactamase-like [Candidatus Koribacter versatilis Ellin345] gi|94552966|gb|ABF42890.1| beta-lactamase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 476 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 31/116 (26%) Query: 9 ILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTG-----PD 63 LG + GV + R +++D G + Sbjct: 6 FLG---AAGV-VTGSKHLVNTAADESGTR---------------GFQLLIDCGLFQGQKE 46 Query: 64 FYMQVLRE---QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + + R+ IDAV+ TH H DH I L +YA + Sbjct: 47 WRERNWRDTPIPAREIDAVVLTHAHLDHTGWIPRLVKEGFTG----PIYATSATVD 98 >gi|108804499|ref|YP_644436.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] gi|108765742|gb|ABG04624.1| beta-lactamase-like protein [Rubrobacter xylanophilus DSM 9941] Length = 274 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 39/154 (25%) Query: 73 VLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDR 132 + + AVL TH HADH G+ L +C L A Sbjct: 46 LDGVRAVLLTHGHADHTAGVASLV---------------RECGDGLR-----IIAAPGVG 85 Query: 133 TYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN----VAYCTDVN 188 P VP + G EA H ++ G R A TD+ Sbjct: 86 GGP--------RAEAVPAGVPFRVGAFEATFFSVPH-DAATYGLRLRAGGLCAALATDLG 136 Query: 189 AFPAESLEKLQNLDFLIIDA------LKNGLHSS 216 E+L ++ ++++A L+ G + + Sbjct: 137 EVGEETLGWMRGAGAVVLEANHDPEWLRRGPYPA 170 >gi|319649759|ref|ZP_08003912.1| ribonuclease J 1 [Bacillus sp. 2_A_57_CT2] gi|317398513|gb|EFV79198.1| ribonuclease J 1 [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 34/150 (22%) Query: 56 VIVDTGPDFYM-------------QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQ 102 +++D G F L + I + TH H DHI GI +L + Sbjct: 34 ILIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIP-----YLLR 88 Query: 103 KRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAI 162 + I VY + L L++ I+ +D+ K++ Sbjct: 89 EVNIPVYGGKLALGLLRNK-------LEEHGLLRQTTLHEIKEDDIIKFRKTS-----VT 136 Query: 163 PILQQHGRISSLGFRF----GNVAYCTDVN 188 H S G G V + D Sbjct: 137 FFRTTHSIPDSYGIVVKTPPGQVVHTGDFK 166 >gi|284044691|ref|YP_003395031.1| beta-lactamase [Conexibacter woesei DSM 14684] gi|283948912|gb|ADB51656.1| beta-lactamase domain protein [Conexibacter woesei DSM 14684] Length = 556 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 52/158 (32%), Gaps = 44/158 (27%) Query: 52 SNTTVIVDTGPDFY--MQV-----------LREQVLSIDAVLYTHPHADHIHGIDGLRGY 98 + V+VDTG F Q+ LR++V I+A++ TH H DH+ + + Sbjct: 27 DDRIVVVDTGLRFPTAEQMGIDLVLPDFTYLRDRVEDIEAIVITHGHEDHLGAL----PW 82 Query: 99 FLK---QKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIEN---NDVPICM 152 L+ + VY P M ++ I + DVP Sbjct: 83 VLRELGTEDAPPVYGGPLAMAMARSK----------------LDEHRIRDVVLEDVPDGE 126 Query: 153 KSAGGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAF 190 G + I H S VA TDV Sbjct: 127 TIEAGPFDIELIHMTHSIPDSNA-----VAITTDVGTV 159 >gi|255521787|ref|ZP_05389024.1| hypothetical protein LmonocFSL_11277 [Listeria monocytogenes FSL J1-175] Length = 499 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 42/132 (31%), Gaps = 15/132 (11%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK----HLFESFRY 124 L E + AV TH H D I + +L QK VY + L E + Sbjct: 4 LEENKDRVKAVFLTHGHEDAIGALP-----YLLQKIKAPVYGTELTIALAKSALKEHRKL 58 Query: 125 CFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLG-FRFGNVA- 182 FK ++ I+ + I + G I G F+F A Sbjct: 59 RFKNFHVVNEETTLSFSKIDVS--FFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAK 116 Query: 183 --YCTDVNAFPA 192 Y +D++ Sbjct: 117 DGYASDLSHIAE 128 >gi|256422474|ref|YP_003123127.1| hypothetical protein Cpin_3459 [Chitinophaga pinensis DSM 2588] gi|256037382|gb|ACU60926.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588] Length = 252 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 19/141 (13%) Query: 52 SNTTVIVDTGPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAA 111 +VD Q L + DAVL TH H+DH D F+ + I V Sbjct: 41 ERRNPLVDLP--LSEQQLAALIAHTDAVLLTHIHSDHW---DDTAREFIP--KHIPVLCQ 93 Query: 112 PDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRI 171 P + E P+ + ++ E + G + G + Sbjct: 94 PANEDTIRE--------QGYTNVTPVADELIWEGIKISRTHGQHGTGQIGERMGIVSGYV 145 Query: 172 SSLG----FRFGNVAYCTDVN 188 S G + G+ +C DV Sbjct: 146 ISDGEEELYIAGDTIWCDDVK 166 >gi|154253893|ref|YP_001414717.1| beta-lactamase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157843|gb|ABS65060.1| beta-lactamase domain protein [Parvibaculum lavamentivorans DS-1] Length = 452 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Query: 52 SNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIH 90 NT +++D G + Q L + IDAV+ TH H DH Sbjct: 23 GNTRILIDCGLFQGLKNLRELNWQRLAVEPKDIDAVVLTHAHLDHCG 69 >gi|159045931|ref|YP_001534725.1| putative metallo-beta-lactamase family protein [Dinoroseobacter shibae DFL 12] gi|157913691|gb|ABV95124.1| putative metallo-beta-lactamase family protein [Dinoroseobacter shibae DFL 12] Length = 266 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 16/91 (17%) Query: 50 RGSNTTVIVDTGPDF-----YMQVLREQV-----------LSIDAVLYTHPHADHIHGID 93 R T++VDTG D + +R SI+ V+ TH H DH G+ Sbjct: 44 RRGPETILVDTGYDMDEGERRARPIRTDPAEALAPLGVSPDSIEQVIVTHLHYDHAGGLH 103 Query: 94 GLRGYFLKQKRPIDVYAAPDCMKHLFESFRY 124 L + YA CM H Y Sbjct: 104 LFPNATLHMQAAEMAYATGPCMCHDVIRMPY 134 >gi|90579255|ref|ZP_01235065.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio angustum S14] gi|90440088|gb|EAS65269.1| 3',5'-cyclic-nucleotide phosphodiesterase [Vibrio angustum S14] Length = 327 Score = 43.6 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 21/126 (16%) Query: 74 LSIDAVLYTHPHADHIHGI-----DGLRGYFLKQKRPIDVYAAPDCMKHL-FESFRY-CF 126 I +H H DHI G+ D + +YA P + + + F + + Sbjct: 91 QKIQGYFISHAHLDHIAGLIIASPDDSKK---------PIYALPSVHQTISQDYFNWKAW 141 Query: 127 KALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGNVA---- 182 + + + + + A ++ H S F F N A Sbjct: 142 PNFTSQGEGFKLGKYELATLTINQWLPVANTELKVKAFPLSHSGEESTAFLFKNAANEVV 201 Query: 183 -YCTDV 187 Y D Sbjct: 202 IYLGDT 207 >gi|308272059|emb|CBX28667.1| Ribonuclease J 1 [uncultured Desulfobacterium sp.] Length = 536 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 34/139 (24%) Query: 69 LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKA 128 L++ I V+ TH H DHI + +L ++ + V+ + + Sbjct: 41 LKQNKSRILGVVLTHAHEDHIGALP-----YLLKEINVPVFGTSFTLGLVRHR------- 88 Query: 129 LDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFG--------- 179 L++ + I +++ K G E I H + +G Sbjct: 89 LEEHSLISSALLYEISSSE-----KLKLGPFEIEFIKVGHSVVDGVGLAIRTPLGLIVHT 143 Query: 180 ---NVAY-----CTDVNAF 190 ++Y TDV+ F Sbjct: 144 GDFKISYTMEGMITDVHGF 162 >gi|259417676|ref|ZP_05741595.1| metallo-beta-lactamase domain protein [Silicibacter sp. TrichCH4B] gi|259346582|gb|EEW58396.1| metallo-beta-lactamase domain protein [Silicibacter sp. TrichCH4B] Length = 356 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 50 RGSNTTVIVDTG--PDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPID 107 ++D G P+ + + +DAV TH H DHI G + + Sbjct: 21 DTGRHRWLLDCGFGPEANANFDPKWLDGVDAVFVTHDHIDHIGG------AAYAVEAGLP 74 Query: 108 VYAAPDCMKHL 118 +YA + L Sbjct: 75 IYATRRTSQAL 85 >gi|77458507|ref|YP_348012.1| Beta-lactamase-like [Pseudomonas fluorescens Pf0-1] gi|77382510|gb|ABA74023.1| putative beta-lactamase-like protein [Pseudomonas fluorescens Pf0-1] Length = 655 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%) Query: 72 QVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMK 116 + A+++TH HADH G+ G+ +R I + A M+ Sbjct: 160 GNKPVTAIIFTHDHADHFGGVLGITSASEVAQRNIPIVAPAGFME 204 >gi|283786428|ref|YP_003366293.1| hypothetical protein ROD_27621 [Citrobacter rodentium ICC168] gi|282949882|emb|CBG89506.1| conserved hypothetical protein [Citrobacter rodentium ICC168] Length = 279 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 10/65 (15%) Query: 42 LKISRVSERGSNTTVIVDTGPDFYMQV---LREQV-------LSIDAVLYTHPHADHIHG 91 + I+ RG ++VD G + L + +D VL TH H DHI G Sbjct: 53 IHINCYLIRGLGRIILVDAGTGPLNNMAGQLNANLAAAGVSPDDVDTVLLTHCHPDHIGG 112 Query: 92 IDGLR 96 + Sbjct: 113 LLDAE 117 >gi|260574780|ref|ZP_05842783.1| beta-lactamase domain protein [Rhodobacter sp. SW2] gi|259023197|gb|EEW26490.1| beta-lactamase domain protein [Rhodobacter sp. SW2] Length = 558 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 44/164 (26%), Gaps = 35/164 (21%) Query: 43 KISRVSERGSNTTVIVDTGPDFYMQV--------------LREQVLSIDAVLYTHPHADH 88 + ++VD G F L + I+A+ TH H DH Sbjct: 22 YVYGYGPEDKERLIVVDLGITFPDMDSTPGVDVIMPDLAWLTARRDRIEAIFITHAHEDH 81 Query: 89 IHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVIENNDV 148 I + L LK K +YA + + P+ V+E Sbjct: 82 IGALAHLWP-QLKSK----IYARRFTAT--------IGRMKLEEAGHPVEAITVVEPRPA 128 Query: 149 PICMKSAGGVIEAIPILQQHGRISSLGFRF----GNVAYCTDVN 188 + G + + H S G + + D Sbjct: 129 VVT----AGPFKVQFVPVAHSIPESAALIIDTPAGRIVHSGDFK 168 >gi|238899158|ref|YP_002924840.1| putative hydroxyacylglutathione hydrolase with metallo-hydrolase/oxidoreductase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259492011|sp|C4K7Z9|GLO2_HAMD5 RecName: Full=Hydroxyacylglutathione hydrolase; AltName: Full=Glyoxalase II; Short=Glx II gi|229466918|gb|ACQ68692.1| putative hydroxyacylglutathione hydrolase with metallo-hydrolase/oxidoreductase domain [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 249 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 50 RGSNTTVIVDTGPDFY-MQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDV 108 + VIVD G VL + L A+L TH H DH+ G+ L L++ I V Sbjct: 19 DSNQHCVIVDPGEASPVESVLTYKGLLPQAILLTHHHQDHLGGVPQL----LRRFPDIPV 74 Query: 109 YAAPDC 114 Y + Sbjct: 75 YGPKET 80 >gi|237809221|ref|YP_002893661.1| beta-lactamase domain-containing protein [Tolumonas auensis DSM 9187] gi|237501482|gb|ACQ94075.1| beta-lactamase domain protein [Tolumonas auensis DSM 9187] Length = 452 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 8/47 (17%) Query: 52 SNTTVIVDTG-----PDFYM---QVLREQVLSIDAVLYTHPHADHIH 90 NT +++D G + Q L + IDAV+ TH H DH Sbjct: 23 GNTRILIDCGLFQGLKNLRELNWQRLAVEPKDIDAVVLTHAHLDHCG 69 >gi|167756931|ref|ZP_02429058.1| hypothetical protein CLORAM_02480 [Clostridium ramosum DSM 1402] gi|167703106|gb|EDS17685.1| hypothetical protein CLORAM_02480 [Clostridium ramosum DSM 1402] Length = 205 Score = 43.6 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Query: 46 RVSERGSNTTVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 V ++ +I+D G + L E L +AVL TH H DHI +D +L + Sbjct: 16 YVVSDENHHCLIIDPGANGKKVVHYLTENELVPEAVLLTHGHFDHIGAVD-----YLYEH 70 Query: 104 RPIDVYAAPDCMKHL 118 +Y D ++ L Sbjct: 71 YHCPIYLHQDDLEML 85 >gi|145593713|ref|YP_001158010.1| beta-lactamase domain-containing protein [Salinispora tropica CNB-440] gi|145303050|gb|ABP53632.1| beta-lactamase domain protein [Salinispora tropica CNB-440]