RPSBLAST alignment of GI: 254780214 and protein with PDBid: 1y44

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Length = 320
 Score = 68.6 bits (166), Expect = 1e-12
 Identities = 51/322 (15%), Positives = 89/322 (27%), Gaps = 76/322 (23%)

Query: 6   HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65
               LG GA +                P   R  +S+ +  + ER S    + D G    
Sbjct: 2   ELLFLGTGAGI----------------PAKARNVTSVALKLLEERRSV--WLFDCGEATQ 43

Query: 66  MQVLREQV--LSIDAVLYTHPHADHIHGIDGLR-GYFLKQKRPIDVYAAPDCMKHLFESF 122
            Q+L   +    I+ +  TH H DH++G+ GL      +          P  +K   E+ 
Sbjct: 44  HQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETS 103

Query: 123 RYCFKAL--DDRTYPPIVNPIVIENNDVPICMKSA------------------------- 155
               K           I   IV E++   +   S                          
Sbjct: 104 LAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVL 163

Query: 156 ----------------GGVIEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAESLEKLQ 199
                           G  +        +G       + G     +       +  E  +
Sbjct: 164 KEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLKELAR 223

Query: 200 NLDFLIIDA------LKNGLHSSHFSLSESLKKIELINPKNAILTHMHVDLDYDMVL--- 250
           + D ++ +A       K      H +  ++    +    K  ILTH+      D  L   
Sbjct: 224 DCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQ 283

Query: 251 ---KSTPSRVVPAFDGMQFSSP 269
                     V A+D ++ + P
Sbjct: 284 KEAVDVFPNSVAAYDFLEVNVP 305