RPSBLAST alignment of GI: 254780214 and SCOP domain: d2cbna1

Alignment

 Score = 55.5 bits (132), Expect = 4e-09
 Identities = 43/320 (13%), Positives = 82/320 (25%), Gaps = 75/320 (23%)

Query: 6   HFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDTGPDFY 65
           +   LG  A +                P   R  +++ +  +     +   + D G    
Sbjct: 2   NLIFLGTSAGV----------------PTRTRNVTAILL-NLQHPTQSGLWLFDCGEGTQ 44

Query: 66  MQVLREQV--LSIDAVLYTHPHADHIHGIDGLRGYFLKQKRP-IDVYAAPDCMKHLFESF 122
            Q+L        +D +  +H H DH+ G+ GL                 P  ++   E+ 
Sbjct: 45  HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETA 104

Query: 123 RYCFKAL------------------DDRTYPPIVNPIVIENNDVPICMKSAGGV------ 158
                +                     R          +E     I    A G       
Sbjct: 105 LRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQAL 164

Query: 159 ----IEAIPILQQHGRISSLGFRFGNVAYCTDVNAFPAES---------------LEKLQ 199
               +   P+ Q+     ++    G      D  A P                  L+  +
Sbjct: 165 KAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAK 224

Query: 200 NLDFLIIDALKNGLHSS------HFSLSESLKKIELINPKNAILTHMHVDLDYDMV---- 249
            +D ++ +A  +    +      H S  ++            I+TH+    D        
Sbjct: 225 GVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLL 284

Query: 250 --LKSTPSRVVPAFDGMQFS 267
              +S       A D   F+
Sbjct: 285 RECRSIFPATELANDFTVFN 304

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: RNase Z-like
domain: Ribonuclease Z (RNase Z)
species: Escherichia coli [TaxId: 562]