RPSBLAST alignment of GI: 254780214 and SCOP domain: d2dkfa1

Alignment

 Score = 44.2 bits (103), Expect = 1e-05
 Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 22/135 (16%)

Query: 53  NTTVIVDTGPDF------YMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106
              V++D G                    +DAVL TH H DH+  +        ++    
Sbjct: 23  GRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRL----PKLFREGYRG 78

Query: 107 DVYAAP-------DCMKHLFESFRYCFKALDD-----RTYPPIVNPIVIENNDVPICMKS 154
            VYA           ++   +     F   +D         P+     +    + +    
Sbjct: 79  PVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQ 138

Query: 155 AGGVIEAIPILQQHG 169
           AG +  +  ++ Q  
Sbjct: 139 AGHLPGSAFVVAQGE 153

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Putative RNA-degradation protein TTHA0252
species: Thermus thermophilus [TaxId: 274]