BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] (271 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780214|ref|YP_003064627.1| metal-dependent hydrolase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 271 Score = 563 bits (1451), Expect = e-162, Method: Compositional matrix adjust. Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT Sbjct: 1 MKDYYHFTILGCGASLGVPRITGDWGACDPTNPKNRRTRSSLKISRVSERGSNTTVIVDT 60 Query: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE Sbjct: 61 GPDFYMQVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPIDVYAAPDCMKHLFE 120 Query: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN Sbjct: 121 SFRYCFKALDDRTYPPIVNPIVIENNDVPICMKSAGGVIEAIPILQQHGRISSLGFRFGN 180 Query: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM Sbjct: 181 VAYCTDVNAFPAESLEKLQNLDFLIIDALKNGLHSSHFSLSESLKKIELINPKNAILTHM 240 Query: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP Sbjct: 241 HVDLDYDMVLKSTPSRVVPAFDGMQFSSPIP 271 >gi|254780583|ref|YP_003064996.1| glyoxalase II [Candidatus Liberibacter asiaticus str. psy62] Length = 256 Score = 26.6 bits (57), Expect = 0.44, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Query: 55 TVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYF 99 T +D PD Y+ ++LRE+ + + TH H DH L+ +F Sbjct: 27 TAAID-APDTYIISKMLREKGWFLTHIFNTHHHIDHTRANLNLKKFF 72 Score = 23.9 bits (50), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 19/51 (37%) Query: 93 DGLRGYFLKQKRPIDVYAAPDCMKHLFESFRYCFKALDDRTYPPIVNPIVI 143 D YF + + Y A C H E +YC K R+ NP I Sbjct: 163 DKTHIYFGHEYTENNAYFALSCDPHNLELQKYCSKVKSMRSQNLYTNPSTI 213 >gi|254780758|ref|YP_003065171.1| hypothetical protein CLIBASIA_03225 [Candidatus Liberibacter asiaticus str. psy62] Length = 216 Score = 25.8 bits (55), Expect = 0.89, Method: Compositional matrix adjust. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 55 TVIVDTGPDFYM--QVLREQVLSIDAVLYTHPHADHIHGIDGLR 96 V+VD G D + V++ + + + TH H DH+ G L+ Sbjct: 29 AVVVDPGGDLDIIKDVIQSRNFHVKQIWITHGHVDHVGGAAQLK 72 >gi|254780322|ref|YP_003064735.1| SAM-dependent methyltransferase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 273 Score = 25.0 bits (53), Expect = 1.4, Method: Compositional matrix adjust. Identities = 11/40 (27%), Positives = 21/40 (52%) Query: 67 QVLREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQKRPI 106 +V +E ++ + T +A +HGI G+ GY + + I Sbjct: 31 RVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKI 70 >gi|254780401|ref|YP_003064814.1| tetraacyldisaccharide 4'-kinase [Candidatus Liberibacter asiaticus str. psy62] Length = 338 Score = 24.3 bits (51), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Query: 48 SERGSNTTVIVDTGPDFYMQV-LREQVLSIDAVLYTHPHADHIHGIDGLRGYFLKQK 103 S RG ++ GP ++V L Q+ +DA+LY + I I YF K K Sbjct: 160 SHRGLGNGLVFPAGP---LRVPLSRQLSYVDAILYVGNKKNVISSIKNKSVYFAKLK 213 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.322 0.140 0.427 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 179,223 Number of Sequences: 1233 Number of extensions: 7244 Number of successful extensions: 15 Number of sequences better than 100.0: 5 Number of HSP's better than 100.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 10 Number of HSP's gapped (non-prelim): 6 length of query: 271 length of database: 328,796 effective HSP length: 73 effective length of query: 198 effective length of database: 238,787 effective search space: 47279826 effective search space used: 47279826 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 37 (18.9 bits)