HHsearch alignment for GI: 254780215 and conserved domain: COG1820
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism].
Probab=96.26 E-value=0.12 Score=31.65 Aligned_cols=232 Identities=16% Similarity=0.170 Sum_probs=126.1
Q ss_pred EEEEECCCCC----H--HHHCCHHHHHHHHHHCCCCEEEEE--CCCHHHHHHHHHHHHHCCC-CCCCCCCCC---CCCCC
Q ss_conf 1686138887----5--652268999999998699899991--6798778999999985572-332112445---44334
Q gi|254780215|r 2 LIDTHCHLLL----P--DFDEDRHDVIMRAHQANVLKMIAI--AIKVKDFVPLIKLCQDYPS-SIFCSVGTH---PCHAH 69 (262)
Q Consensus 2 ~iD~H~HL~~----~--~~~~d~~~~i~~a~~~gv~~~i~~--~~~~~~~~~~~~l~~~~p~-~i~~a~GiH---P~~~~ 69 (262)
T Consensus 54 fID~hihG~gG~~~~D~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ls~ 133 (380)
T COG1820 54 FIDLHIHGGGGADFMDAGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQILGIHLEGPFLSP 133 (380)
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
T ss_conf 78975337674133676478999999998662174224201035999999999999999985468836899841675687
Q ss_pred ------------CCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE-ECHHHHHH
Q ss_conf ------------46788998853100133321004467755332211102467899998766420442033-00023335
Q gi|254780215|r 70 ------------EENEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVI-HSRSADDD 136 (262)
Q Consensus 70 ------------~~~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~i-H~r~a~~~ 136 (262)
T Consensus 134 ~kkGAh~~~~ir~~~~~~~~~~~~~a~g-~i~~---vT------lAPE~~~---~~e~i~~l~~~giivs~GHS~Atye~ 200 (380)
T COG1820 134 EKKGAHNPEYIRPPDPEELEQLIAAADG-LIKL---VT------LAPELDG---TKELIRLLANAGIVVSIGHSNATYEQ 200 (380)
T ss_pred HHCCCCCHHHCCCCCHHHHHHHHHHCCC-CEEE---EE------ECCCCCC---CHHHHHHHHHCCEEEEECCCCCCHHH
T ss_conf 5546998899079899999999874468-4699---99------8878888---89999999868939971575254999
Q ss_pred HHHHHHHHHHCCCCCCCCEECCCCHHHHHH-------HHCC-CCEEECC--CCCCHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 799985310003675331121464023443-------2103-5202023--32211333223333210566717983078
Q gi|254780215|r 137 MAAILQEEMKKGPFPFVIHCFSSSQKLADI-------CLEL-GGYISFT--GMITFPKYDALRAIARGIPMDRVLVETDS 206 (262)
Q Consensus 137 ~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~-------~l~~-g~y~S~~--g~i~~~~~~~~~e~v~~iPldriLlETDs 206 (262)
T Consensus 201 ~~~a~~~----G-a~~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVh--P~~~~ia~~~kg~~~i~LVTDa 273 (380)
T COG1820 201 ARAAFEA----G-ATFVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVH--PAAIRLALKAKGGDKIVLVTDA 273 (380)
T ss_pred HHHHHHC----C-CCEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCC--HHHHHHHHHCCCCCEEEEEECC
T ss_conf 9999970----8-6369860147888788898610434227974899982675069--9999999861588649999715
Q ss_pred CCCCCCCC--------------CCC--C-------CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 66787776--------------887--5-------8824499999999987289989999999999999842
Q gi|254780215|r 207 PYIVPVSC--------------QGK--R-------NEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFS 255 (262)
Q Consensus 207 P~l~p~~~--------------r~~--~-------n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262)
T Consensus 274 --m~a~G~~dg~y~lgg~~V~v~~g~~~~~~GtLAGS~Ltm~~avrn~v~~~~~~~~eAv~maS~~PA~~lg 343 (380)
T COG1820 274 --MAAAGLPDGEYILGGQTVTVADGARRLEDGTLAGSTLTMDEAVRNLVEWGGISLAEAVRMASLNPAKALG 343 (380)
T ss_pred --CCCCCCCCCCEEECCEEEEEECCEEECCCCCEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf --5647898851887887899978978878996642225699999999997489999999884134798809