HHsearch alignment for GI: 254780215 and conserved domain: PRK07369
>PRK07369 dihydroorotase; Provisional.
Probab=98.34 E-value=0.00017 Score=50.64 Aligned_cols=238 Identities=17% Similarity=0.161 Sum_probs=115.5
Q ss_pred EEEEECCCCCHHH--HCCHHHHHHHHHHCCCCEEEEE-CCCH-----HHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCC
Q ss_conf 1686138887565--2268999999998699899991-6798-----7789999999855723321124454433--446
Q gi|254780215|r 2 LIDTHCHLLLPDF--DEDRHDVIMRAHQANVLKMIAI-AIKV-----KDFVPLIKLCQDYPSSIFCSVGTHPCHA--HEE 71 (262)
Q Consensus 2 ~iD~H~HL~~~~~--~~d~~~~i~~a~~~gv~~~i~~-~~~~-----~~~~~~~~l~~~~p~~i~~a~GiHP~~~--~~~ 71 (262)
T Consensus 59 ~ID~HvH~~~pg~~~ked~~tgt~AAa~GGvTtv~~mPnt~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~ 134 (419)
T PRK07369 59 LVDLYSHSGEPGFEERETLASLAAAAAAGGFTRVAILPDTSPPLDNPATLARLQQQLQG----PSPPPQLLFWGALTLGG 134 (419)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC----CCCCEEEEEEEEEECCC
T ss_conf 99787457999864304298899999818976999898999998859999999999600----69973999971245386
Q ss_pred CHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-----------------
Q ss_conf 788998853100133321004467755332211102467899998766420442033000233-----------------
Q gi|254780215|r 72 NEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD----------------- 134 (262)
Q Consensus 72 ~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~----------------- 134 (262)
T Consensus 135 ~~~~l~el~~l~~~-Gv-----~~f---~~~~~~~-~~~~l~~~l~~~~~~~~~v~~h~ed~~l~~~~~~~~g~~~~~~~ 204 (419)
T PRK07369 135 QGKQLTELAELAAA-GV-----VGF---TDGQPLE-NLALLRRLLEYLAPLGKPVALWPCDRQLAGNGVMREGPDALRLG 204 (419)
T ss_pred CHHHHHHHHHHHHC-CC-----EEE---CCCCCCC-CHHHHHHHHHHHHHCCCEEEEECCCHHHHHCHHHHCCCCCHHCC
T ss_conf 24567766667607-96-----890---4896548-99999999999986399189950689887272654486402028
Q ss_pred -------HHH---HHHHHHHHHCCCCCC-CCEECC-CCHHHHHHHHCCCCEE-----------------------ECCCC
Q ss_conf -------357---999853100036753-311214-6402344321035202-----------------------02332
Q gi|254780215|r 135 -------DDM---AAILQEEMKKGPFPF-VIHCFS-SSQKLADICLELGGYI-----------------------SFTGM 179 (262)
Q Consensus 135 -------~~~---l~iL~~~~~~~~~~~-i~H~Fs-G~~~~~~~~l~~g~y~-----------------------S~~g~ 179 (262)
T Consensus 205 ~~~rP~~~E~~av~r~i~-lA~~~g~~lhi~HvSs~~~~e~i~~ak~~G~~vt~Et~phhL~l~~~~~~~~~~~~k~~PP 283 (419)
T PRK07369 205 LPGIPASAETAALAALLE-LVAAIGTPVHLMRVSTARSVELIAQAKARGLPITASTTWMHLLLNTEALASYDPNLRLDPP 283 (419)
T ss_pred CCCCCHHHHHHHHHHHHH-HHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCHHHHHCCHHHHHCCCCCEEEECC
T ss_conf 998844554699999999-9887538489961685899999998886398089646257554789787275775798589
Q ss_pred CCHHHHHHHHHHHHCCCCCCE-EEEEC-CCCCCCCCCC-------CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 211333223333210566717-98307-8667877768-------87588244999999999872899899999999999
Q gi|254780215|r 180 ITFPKYDALRAIARGIPMDRV-LVETD-SPYIVPVSCQ-------GKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNA 250 (262)
Q Consensus 180 i~~~~~~~~~e~v~~iPldri-LlETD-sP~l~p~~~r-------~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~ 250 (262)
T Consensus 284 LR~~~--d~~aLw~al~~G~Id~i~SDHaP~~~~eK~~~f~~ap~G~~Gve~~lpll~~~~V~~g~lsl~~~v~~~s~nP 361 (419)
T PRK07369 284 LGNPS--DRQALIEGIRTGIIDAIAIDHTPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNP 361 (419)
T ss_pred CCCHH--HHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 98988--9999987873697679982888999888448853489983438879999999998749989999999977789
Q ss_pred HHHHHH
Q ss_conf 998425
Q gi|254780215|r 251 LKLFSK 256 (262)
Q Consensus 251 ~~~f~~ 256 (262)
T Consensus 362 Aki~gl 367 (419)
T PRK07369 362 ARCLGL 367 (419)
T ss_pred HHHHCC
T ss_conf 998399