HHsearch alignment for GI: 254780215 and conserved domain: PRK09230

>PRK09230 cytosine deaminase; Provisional.
Probab=97.38  E-value=0.016  Score=37.43  Aligned_cols=220  Identities=7%  Similarity=0.053  Sum_probs=100.0

Q ss_pred             HHHHHHHCCCCEE---EEE-CCCHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCEEC
Q ss_conf             9999998699899---991-6798778999999985572332---112445443344678899885310013-3321004
Q gi|254780215|r   21 VIMRAHQANVLKM---IAI-AIKVKDFVPLIKLCQDYPSSIF---CSVGTHPCHAHEENEVLVDELVCLASH-PRVVAIG   92 (262)
Q Consensus        21 ~i~~a~~~gv~~~---i~~-~~~~~~~~~~~~l~~~~p~~i~---~a~GiHP~~~~~~~~~~~~~l~~l~~~-~~~~aIG   92 (262)
T Consensus       107 ~l~~~ia~Gtt~iRtHvDv~dp~l~~leal~~~re~~~~~idlQiVAFPQ~Gl~~~~~~~~Ll---~eAl~~Gadv--vG  181 (426)
T PRK09230        107 TLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIVAFPQEGILSYPNGEALL---EEALRLGADV--VG  181 (426)
T ss_pred             HHHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH---HHHHHHCCCE--EE
T ss_conf             999999818244013345377035169999999998435201688830365424688779999---9999808988--84


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH---HHHHHHHHHHHHHHC--CCCCC-CCEECCC---CHHH
Q ss_conf             4677553322111024678999987664204420330002---333579998531000--36753-3112146---4023
Q gi|254780215|r   93 ETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS---ADDDMAAILQEEMKK--GPFPF-VIHCFSS---SQKL  163 (262)
Q Consensus        93 EiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~---a~~~~l~iL~~~~~~--~~~~~-i~H~FsG---~~~~  163 (262)
T Consensus       182 --Gvp~~~--~~~~~~~~~L~~vf~LA~~~~~~vDiHldE~~d~~~~~l~~ia~~t~~~g~~grVt~sH~~sL~~~~~~~  257 (426)
T PRK09230        182 --AIPHFE--FTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMGARVTASHTTAMHSYNGAY  257 (426)
T ss_pred             --CCCCCC--CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHH
T ss_conf             --789977--7804579999999999998299858877788883378999999999983899865630005453399999


Q ss_pred             HHHHH----CCCCEEECCCCC-CHHHH-----------HHHHHHHHCCCCCCEEEEECC---CCCCCCCCCCCCCCHHHH
Q ss_conf             44321----035202023322-11333-----------223333210566717983078---667877768875882449
Q gi|254780215|r  164 ADICL----ELGGYISFTGMI-TFPKY-----------DALRAIARGIPMDRVLVETDS---PYIVPVSCQGKRNEPAYV  224 (262)
Q Consensus       164 ~~~~l----~~g~y~S~~g~i-~~~~~-----------~~~~e~v~~iPldriLlETDs---P~l~p~~~r~~~n~P~~i  224 (262)
T Consensus       258 ~~~~~~~laeagi~vvslP~tNl~LqgR~~~~p~~Rgvtpv~eL~~a--GV~V~~GsDnvrD~w~---P~--G~~D~Le~  330 (426)
T PRK09230        258 TSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLEA--GINVCFGHDDVFDPWY---PL--GTANMLQV  330 (426)
T ss_pred             HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHC--CCEEEEECCCCCCCCC---CC--CCCCHHHH
T ss_conf             99999999982985785254332135656778888887789999976--9869980788877874---89--99889999


Q ss_pred             HHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
Q ss_conf             999999998728-99899999999999998425
Q gi|254780215|r  225 VNTAKALAKEKD-VSYEDLMEETTKNALKLFSK  256 (262)
Q Consensus       225 ~~~~~~iA~i~~-~~~eei~~~~~~N~~~~f~~  256 (262)
T Consensus       331 a~l~~~~~~l~~~~~l~~~~~~vT~~~A~~lgl  363 (426)
T PRK09230        331 LHMGLHVCQLMGYGQINDGLNLITTHSARTLNL  363 (426)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999970488778999999974258886199