HHsearch alignment for GI: 254780215 and conserved domain: PRK09357

>PRK09357 pyrC dihydroorotase; Validated.
Probab=98.20  E-value=0.00064  Score=46.82  Aligned_cols=239  Identities=18%  Similarity=0.203  Sum_probs=111.2

Q ss_pred             EEEEECCCCCHH--HHCCHHHHHHHHHHCCCCEEEEEC-C-----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCC
Q ss_conf             168613888756--522689999999986998999916-7-----987789999999855723321124454433--446
Q gi|254780215|r    2 LIDTHCHLLLPD--FDEDRHDVIMRAHQANVLKMIAIA-I-----KVKDFVPLIKLCQDYPSSIFCSVGTHPCHA--HEE   71 (262)
Q Consensus         2 ~iD~H~HL~~~~--~~~d~~~~i~~a~~~gv~~~i~~~-~-----~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~--~~~   71 (262)
T Consensus        57 fID~H~H~~~pg~~~~~~~~~g~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~t~~~  131 (425)
T PRK09357         57 LVDLHVHLREPGQEYKETIETGTRAAAAGGFTTVVAMPNTNPVIDTPEVVEYVLDLAKEAG-VV----DVLPVGAITKGL  131 (425)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC-CC----EEEEEECCCCCC
T ss_conf             8977716788997630036676899985780589616898777785999999998642048-51----146752135776


Q ss_pred             CHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-----------------
Q ss_conf             788998853100133321004467755332211102467899998766420442033000233-----------------
Q gi|254780215|r   72 NEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD-----------------  134 (262)
Q Consensus        72 ~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~-----------------  134 (262)
T Consensus       132 ~~~~l~~~~~l~~-~g~~~~s~~~~-~---~~--~--~~~l~~~~~~a~~~~~~~~~h~e~~~l~~~~~~~~g~~~~~~~  202 (425)
T PRK09357        132 AGEELTEFGALAE-AGVVAFSDDGI-P---VQ--D--ARLMRRALEYAKKLDLLIAQHCEDPSLTEGGVMNEGIVAARLG  202 (425)
T ss_pred             CHHHHHHHHHHHH-CCEEEEECCCC-E---EC--C--HHHHHHHHHHHHHCCCEEEECCCCHHHHHCHHHCCCCCHHHCC
T ss_conf             5045677776542-57479813992-3---04--5--8999999988864595699742523344220224686312038


Q ss_pred             -------HHHHHHHH--HHHHCCCCCCCC-EECC-CCHHHHHHHHCCCCEEE---------C--------------CCCC
Q ss_conf             -------35799985--310003675331-1214-64023443210352020---------2--------------3322
Q gi|254780215|r  135 -------DDMAAILQ--EEMKKGPFPFVI-HCFS-SSQKLADICLELGGYIS---------F--------------TGMI  180 (262)
Q Consensus       135 -------~~~l~iL~--~~~~~~~~~~i~-H~Fs-G~~~~~~~~l~~g~y~S---------~--------------~g~i  180 (262)
T Consensus       203 ~~~~p~~~E~~~i~r~~~la~~~g~~~hi~H~ss~~~le~i~~ak~~G~~vt~e~~p~~l~~t~~~~~~~~~~~k~~PpL  282 (425)
T PRK09357        203 LPGIPEVAEEVAIARDVLLAEETGARYHICHVSTAGSVELIRFAKALGIKVTAEVTPHHLLLTDEDLLTYDGNYKVNPPL  282 (425)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCCHHHHHCCCCCEEECCCC
T ss_conf             99997678898999999988761992687514616589999999983897523414556528985762368632207986


Q ss_pred             CH-HHHHHHHHHHHCCCCCCEEEEEC-CCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             11-33322333321056671798307-866787776-------8875882449999999998728998999999999999
Q gi|254780215|r  181 TF-PKYDALRAIARGIPMDRVLVETD-SPYIVPVSC-------QGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNAL  251 (262)
Q Consensus       181 ~~-~~~~~~~e~v~~iPldriLlETD-sP~l~p~~~-------r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~  251 (262)
T Consensus       283 r~~~~~~~l~~~l~~g~i--~~i~tDh~P~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~v~~~~lsle~~v~~~T~nPA  360 (425)
T PRK09357        283 RSKEDREALIEALKDGTI--DAIATDHAPHAEEEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKLSINPA  360 (425)
T ss_pred             CCHHHHHHHHHHHHCCCE--EEEEECCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf             525569999999966988--999968888886773445000778987477689999999987599999999999979999


Q ss_pred             HHHHH
Q ss_conf             98425
Q gi|254780215|r  252 KLFSK  256 (262)
Q Consensus       252 ~~f~~  256 (262)
T Consensus       361 k~lGl  365 (425)
T PRK09357        361 RILGL  365 (425)
T ss_pred             HHHCC
T ss_conf             99599