HHsearch alignment for GI: 254780215 and conserved domain: PRK09357
>PRK09357 pyrC dihydroorotase; Validated.
Probab=98.20 E-value=0.00064 Score=46.82 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=111.2
Q ss_pred EEEEECCCCCHH--HHCCHHHHHHHHHHCCCCEEEEEC-C-----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCC
Q ss_conf 168613888756--522689999999986998999916-7-----987789999999855723321124454433--446
Q gi|254780215|r 2 LIDTHCHLLLPD--FDEDRHDVIMRAHQANVLKMIAIA-I-----KVKDFVPLIKLCQDYPSSIFCSVGTHPCHA--HEE 71 (262)
Q Consensus 2 ~iD~H~HL~~~~--~~~d~~~~i~~a~~~gv~~~i~~~-~-----~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~--~~~ 71 (262)
T Consensus 57 fID~H~H~~~pg~~~~~~~~~g~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~t~~~ 131 (425)
T PRK09357 57 LVDLHVHLREPGQEYKETIETGTRAAAAGGFTTVVAMPNTNPVIDTPEVVEYVLDLAKEAG-VV----DVLPVGAITKGL 131 (425)
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC-CC----EEEEEECCCCCC
T ss_conf 8977716788997630036676899985780589616898777785999999998642048-51----146752135776
Q ss_pred CHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-----------------
Q ss_conf 788998853100133321004467755332211102467899998766420442033000233-----------------
Q gi|254780215|r 72 NEVLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD----------------- 134 (262)
Q Consensus 72 ~~~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~----------------- 134 (262)
T Consensus 132 ~~~~l~~~~~l~~-~g~~~~s~~~~-~---~~--~--~~~l~~~~~~a~~~~~~~~~h~e~~~l~~~~~~~~g~~~~~~~ 202 (425)
T PRK09357 132 AGEELTEFGALAE-AGVVAFSDDGI-P---VQ--D--ARLMRRALEYAKKLDLLIAQHCEDPSLTEGGVMNEGIVAARLG 202 (425)
T ss_pred CHHHHHHHHHHHH-CCEEEEECCCC-E---EC--C--HHHHHHHHHHHHHCCCEEEECCCCHHHHHCHHHCCCCCHHHCC
T ss_conf 5045677776542-57479813992-3---04--5--8999999988864595699742523344220224686312038
Q ss_pred -------HHHHHHHH--HHHHCCCCCCCC-EECC-CCHHHHHHHHCCCCEEE---------C--------------CCCC
Q ss_conf -------35799985--310003675331-1214-64023443210352020---------2--------------3322
Q gi|254780215|r 135 -------DDMAAILQ--EEMKKGPFPFVI-HCFS-SSQKLADICLELGGYIS---------F--------------TGMI 180 (262)
Q Consensus 135 -------~~~l~iL~--~~~~~~~~~~i~-H~Fs-G~~~~~~~~l~~g~y~S---------~--------------~g~i 180 (262)
T Consensus 203 ~~~~p~~~E~~~i~r~~~la~~~g~~~hi~H~ss~~~le~i~~ak~~G~~vt~e~~p~~l~~t~~~~~~~~~~~k~~PpL 282 (425)
T PRK09357 203 LPGIPEVAEEVAIARDVLLAEETGARYHICHVSTAGSVELIRFAKALGIKVTAEVTPHHLLLTDEDLLTYDGNYKVNPPL 282 (425)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCCHHHHHCCCCCEEECCCC
T ss_conf 99997678898999999988761992687514616589999999983897523414556528985762368632207986
Q ss_pred CH-HHHHHHHHHHHCCCCCCEEEEEC-CCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 11-33322333321056671798307-866787776-------8875882449999999998728998999999999999
Q gi|254780215|r 181 TF-PKYDALRAIARGIPMDRVLVETD-SPYIVPVSC-------QGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNAL 251 (262)
Q Consensus 181 ~~-~~~~~~~e~v~~iPldriLlETD-sP~l~p~~~-------r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~ 251 (262)
T Consensus 283 r~~~~~~~l~~~l~~g~i--~~i~tDh~P~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~v~~~~lsle~~v~~~T~nPA 360 (425)
T PRK09357 283 RSKEDREALIEALKDGTI--DAIATDHAPHAEEEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKLSINPA 360 (425)
T ss_pred CCHHHHHHHHHHHHCCCE--EEEEECCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 525569999999966988--999968888886773445000778987477689999999987599999999999979999
Q ss_pred HHHHH
Q ss_conf 98425
Q gi|254780215|r 252 KLFSK 256 (262)
Q Consensus 252 ~~f~~ 256 (262)
T Consensus 361 k~lGl 365 (425)
T PRK09357 361 RILGL 365 (425)
T ss_pred HHHCC
T ss_conf 99599