HHsearch alignment for GI: 254780215 and conserved domain: TIGR00010
>TIGR00010 TIGR00010 hydrolase, TatD family; InterPro: IPR015991 Escherichia coli TatD (synonym MttC) has been shown experimentally to be a DNase . On the basis of operon structure, it was originally thought to be involved in the Sec-independent export of protein precursors bearing twin arginine signal peptides by the Tat system . This alternative membrane targeting and translocation system (Mtt), also called twin arginine translocase (Tat) (MttA1A2BC or TatABCD), has been shown to transport fully folded proteins to, or across, the membrane , . However, it was later determined that TatD is not required for this translocation process , . Furthermore, it was noted that no exact correlation exists between the ability of an organism to synthesise a TatD-like protein and whether that organism has a Tat protein transport pathway . Also, with the exception of Escherichia coli , the genetic linkage between TatD and other Tat genes (operon structure) is not maintained. Members of this group may be distantly related to a large 3D fold-based domain superfamily of metalloenzymes . The description of this fold superfamily was based on an analysis of conservation patterns in three dimensions, and the discovery that the same active-site architecture occurs in a large set of enzymes involved primarily in nucleotide metabolism. The group is thought to include urease, dihydroorotase, allantoinase, hydantoinase, AMP-, adenine- and cytosine- deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolase, formylmethanofuran dehydrogenase, and other enzymes ..
Probab=100.00 E-value=0 Score=584.92 Aligned_cols=254 Identities=42% Similarity=0.723 Sum_probs=245.1
Q ss_pred EEEEECCCCCHHHHC---CHHHHHHHHHHCCCCEEEEECCCHHHHH-HHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 168613888756522---6899999999869989999167987789-99999985572-332112445443344678899
Q gi|254780215|r 2 LIDTHCHLLLPDFDE---DRHDVIMRAHQANVLKMIAIAIKVKDFV-PLIKLCQDYPS-SIFCSVGTHPCHAHEENEVLV 76 (262)
Q Consensus 2 ~iD~H~HL~~~~~~~---d~~~~i~~a~~~gv~~~i~~~~~~~~~~-~~~~l~~~~p~-~i~~a~GiHP~~~~~~~~~~~ 76 (262)
T Consensus 1 ~~D~HcHL~~~~~~~~~~d~~~v~~ra~~~~v~~~v~vg~~l~~~~W~~~~l~~~~~g~~v~~~~G~HP~d~~~~~~~~~ 80 (269)
T TIGR00010 1 LIDAHCHLDLLDFEELHVDVEEVIERAKAEGVTAVVDVGTDLEDLNWRALELAEKYPGDNVYAAVGVHPLDVEDDTKEDI 80 (269)
T ss_pred CCCCEECCCCCCCCHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 91100135622221220358999999997499299973467002069999999847997699982268722204208999
Q ss_pred HHHHHHC--CCCCCCEECCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH--HHCCCC
Q ss_conf 8853100--1333210044677553322111--024678999987664204420330002333579998531--000367
Q gi|254780215|r 77 DELVCLA--SHPRVVAIGETGLDRYHNAHTI--EEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEE--MKKGPF 150 (262)
Q Consensus 77 ~~l~~l~--~~~~~~aIGEiGLD~~~~~~~~--e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~--~~~~~~ 150 (262)
T Consensus 81 ~~l~~l~~~~~~~v~AiGE~GLDY~~~~~~~e~~~Q~e~F~~q~~lA~~~~~P~iiH~RdA~~d~~~iL~~~y~~~~~~~ 160 (269)
T TIGR00010 81 KELEKLAKNAHPKVVAIGETGLDYYKADEKKERRRQKEVFRAQLQLAEELNLPVIIHARDAEEDVLDILREYYAEKAPKV 160 (269)
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999998506954798510440430687521789999999999999971996899788457999999999984278778
Q ss_pred CCCCEECCCCHHHHHHHHCCC---CEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 533112146402344321035---20202332211333223333210566717983078667877768875882449999
Q gi|254780215|r 151 PFVIHCFSSSQKLADICLELG---GYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNT 227 (262)
Q Consensus 151 ~~i~H~FsG~~~~~~~~l~~g---~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~ 227 (262)
T Consensus 161 ~g~~HCftg~~E~a~~~ld~gd~~~yiSisG~vTFknA~~l~~~v~~iP~e~LL~ETDSPyLaP~P~RGK~N~P~~v~~v 240 (269)
T TIGR00010 161 GGVLHCFTGDAELAKKLLDLGDLLFYISISGIVTFKNAKSLREVVKKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYV 240 (269)
T ss_pred CEEEEECCCCHHHHHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 75798148888999999606987999972860221062678999974596432320167445788988985674059999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999987289989999999999999842
Q gi|254780215|r 228 AKALAKEKDVSYEDLMEETTKNALKLFS 255 (262)
Q Consensus 228 ~~~iA~i~~~~~eei~~~~~~N~~~~f~ 255 (262)
T Consensus 241 ~~~iAeik~~~~ee~~~~~t~N~~~lF~ 268 (269)
T TIGR00010 241 VEAIAEIKGIDLEELAQITTKNAKRLFK 268 (269)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999988388999999999999999845