HHsearch alignment for GI: 254780215 and conserved domain: cd01293
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=97.67 E-value=0.0067 Score=40.00 Aligned_cols=217 Identities=14% Similarity=0.112 Sum_probs=95.5
Q ss_pred HHHHHHHCCCCEEEE-----ECCCHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCEE
Q ss_conf 999999869989999-----167987789999999855723321---12445443344678899885310013-332100
Q gi|254780215|r 21 VIMRAHQANVLKMIA-----IAIKVKDFVPLIKLCQDYPSSIFC---SVGTHPCHAHEENEVLVDELVCLASH-PRVVAI 91 (262)
Q Consensus 21 ~i~~a~~~gv~~~i~-----~~~~~~~~~~~~~l~~~~p~~i~~---a~GiHP~~~~~~~~~~~~~l~~l~~~-~~~~aI 91 (262)
T Consensus 101 ~~~~~l~~G~T~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~g~~~--~ 175 (398)
T cd01293 101 ALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFPQHGLLST---PGGEELMREALKMGADV--V 175 (398)
T ss_pred HHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC---HHHHHHHHHHHHHCCCE--E
T ss_conf 999999659618876433145221569999999999846443401364477312466---41899999999824600--6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-------HHHHHHHHHHHHCCCCCCCCEECCCC----
Q ss_conf 4467755332211102467899998766420442033000233-------35799985310003675331121464----
Q gi|254780215|r 92 GETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD-------DDMAAILQEEMKKGPFPFVIHCFSSS---- 160 (262)
Q Consensus 92 GEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~-------~~~l~iL~~~~~~~~~~~i~H~FsG~---- 160 (262)
T Consensus 176 g--~~~~~~~~~~---~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~~~-~~~~~H~~~l~~~~~ 249 (398)
T cd01293 176 G--GIPPAEIDED---GEESLDTLFELAQEHGLDIDLHLDETDDPGSRTLEELAEEAERRGMQG-RVTCSHATALGSLPE 249 (398)
T ss_pred E--ECCCCCCCCC---HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC-CEEHHHHHHCCCCCH
T ss_conf 4--1266567887---799999999999984998799545644403669999999999829976-455654321537998
Q ss_pred ---HHHHHHHHCCCCEEECCCCCCHHHHH------------HHHHHHHCCCCCCEEEEECCCCCCC-CCCCCCCCCHHHH
Q ss_conf ---02344321035202023322113332------------2333321056671798307866787-7768875882449
Q gi|254780215|r 161 ---QKLADICLELGGYISFTGMITFPKYD------------ALRAIARGIPMDRVLVETDSPYIVP-VSCQGKRNEPAYV 224 (262)
Q Consensus 161 ---~~~~~~~l~~g~y~S~~g~i~~~~~~------------~~~e~v~~iPldriLlETDsP~l~p-~~~r~~~n~P~~i 224 (262)
T Consensus 250 ~~~~~~~~~la~~gv~v~~~p~~~~~l~~~~~~~~~~~g~~~v~~l~~a--Gv~v~lGtD~~~-~~~~p~----g~~-~~ 321 (398)
T cd01293 250 AEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTPVKELRAA--GVNVALGSDNVR-DPWYPF----GSG-DM 321 (398)
T ss_pred HHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHC--CCEEEECCCCCC-CCCCCC----CCH-HH
T ss_conf 8999999999873987998750456534432134444588889999977--993996588887-888888----865-49
Q ss_pred HHHHHHHHHHHCCC----HHHHHHHHHHHHHHHHHH
Q ss_conf 99999999872899----899999999999998425
Q gi|254780215|r 225 VNTAKALAKEKDVS----YEDLMEETTKNALKLFSK 256 (262)
Q Consensus 225 ~~~~~~iA~i~~~~----~eei~~~~~~N~~~~f~~ 256 (262)
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lGl 357 (398)
T cd01293 322 LEVANLAAHIAQLGTPEDLALALDLITGNAARALGL 357 (398)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999958997778999999993999997199