HHsearch alignment for GI: 254780215 and conserved domain: cd01299
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=94.95 E-value=0.37 Score=28.43 Aligned_cols=133 Identities=16% Similarity=0.172 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCC--H----
Q ss_conf 6789999876642044203300023335799985310003675331121464023443210352020233221--1----
Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMIT--F---- 182 (262)
Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~--~---- 182 (262)
T Consensus 159 ~~~~~~~~~~a~~~g~~v~~H~~~~~~-~~~~~-~---~-G~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 232 (342)
T cd01299 159 EEELRAIVDEAHKAGLYVAAHAYGAEA-IRRAI-R---A-GVDTIEHGFLIDDETIELMKEKGIFLVPTLATYEALAAEG 232 (342)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCHHH-HHHHH-H---H-CCCHHHHHCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHC
T ss_conf 999999999999819946774166389-99999-9---1-9962676504889999999977918945647878877502
Q ss_pred ----------HH----HHHHHHHHHCCC--CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf ----------33----322333321056--67179830786678777688758824499999999987289989999999
Q gi|254780215|r 183 ----------PK----YDALRAIARGIP--MDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSYEDLMEET 246 (262)
Q Consensus 183 ----------~~----~~~~~e~v~~iP--ldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~ 246 (262)
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aGv~v~lgtD~~~~~--------~~~~~~~~~~~~~~~-~gl~~~eal~~a 303 (342)
T cd01299 233 AAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPV--------PPHGWNARELELLVK-AGGTPAEALRAA 303 (342)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC--------CCHHHHHHHHHHHHH-CCCCHHHHHHHH
T ss_conf 44577667888888766645799999997799499867888887--------726799999999998-399999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998425
Q gi|254780215|r 247 TKNALKLFSK 256 (262)
Q Consensus 247 ~~N~~~~f~~ 256 (262)
T Consensus 304 T~n~A~~lgl 313 (342)
T cd01299 304 TANAAELLGL 313 (342)
T ss_pred HHHHHHHHCC
T ss_conf 9999999689