HHsearch alignment for GI: 254780215 and conserved domain: cd01307
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.91 E-value=0.0022 Score=43.26 Aligned_cols=134 Identities=17% Similarity=0.236 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH-----------HHHHHHCCCCEEECC
Q ss_conf 678999987664204420330002333579998531000367533112146402-----------344321035202023
Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSSQK-----------LADICLELGGYISFT 177 (262)
Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~~~-----------~~~~~l~~g~y~S~~ 177 (262)
T Consensus 148 ~~~~~~a~~~a~~~~~~~~vH~~~~~~~~~~~~~~~-~~~--~~~~h~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~ 224 (338)
T cd01307 148 IKPLELAKKIAKEADLPLMVHIGSPPPILDEVVPLL-RRG--DVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVG 224 (338)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-HCC--CEEEEEECCCCCCEECCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 479999999998649957999689826499999986-448--87999744788731367426789999999759689975
Q ss_pred C-C--CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 3-2--2113332233332105667179830786678777688758824-4999999999872899899999999999998
Q gi|254780215|r 178 G-M--ITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPA-YVVNTAKALAKEKDVSYEDLMEETTKNALKL 253 (262)
Q Consensus 178 g-~--i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~-~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~ 253 (262)
T Consensus 225 ~~~~~~~~~~~---~~~~~-~g~~~~~i~~d~~~~----~--~~~~~~~~~~~~~~~~~~-~Glsl~~~v~~~T~npA~~ 293 (338)
T cd01307 225 HGTASFSFRVA---RAAIA-AGLLPDTISSDIHGR----N--RTNGPVYALATTLSKLLA-LGMPLEEVIEAVTANPARM 293 (338)
T ss_pred CCCCCCCHHHH---HHHHH-CCCCCCEECCCCCCC----C--CCCCCCCCHHHHHHHHHH-CCCCHHHHHHHHHHHHHHH
T ss_conf 77776687999---99985-599885752676655----6--778540122778999998-4998999999998999998
Q ss_pred HHH
Q ss_conf 425
Q gi|254780215|r 254 FSK 256 (262)
Q Consensus 254 f~~ 256 (262)
T Consensus 294 lGl 296 (338)
T cd01307 294 LGL 296 (338)
T ss_pred HCC
T ss_conf 199