HHsearch alignment for GI: 254780215 and conserved domain: cd01317
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=98.41 E-value=7.9e-05 Score=52.85 Aligned_cols=240 Identities=16% Similarity=0.159 Sum_probs=115.2
Q ss_pred EEEEECCCCCHHH--HCCHHHHHHHHHHCCCCEEEEEC-CC-----HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 1686138887565--22689999999986998999916-79-----8778999999985572332112445443344678
Q gi|254780215|r 2 LIDTHCHLLLPDF--DEDRHDVIMRAHQANVLKMIAIA-IK-----VKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENE 73 (262)
Q Consensus 2 ~iD~H~HL~~~~~--~~d~~~~i~~a~~~gv~~~i~~~-~~-----~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~ 73 (262)
T Consensus 16 ~ID~H~H~~~pg~~~~e~~~t~t~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~ 92 (374)
T cd01317 16 LVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDV-GIV--RVLPIGALTKGLKG 92 (374)
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC-CCC--CEEEEEEEECCCCH
T ss_conf 685450359999765144999999998399589997889999989799999999970345-883--04789984548633
Q ss_pred HHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHH-------------------
Q ss_conf 8998853100133321004467755332211102467899998766420442033000233-------------------
Q gi|254780215|r 74 VLVDELVCLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSAD------------------- 134 (262)
Q Consensus 74 ~~~~~l~~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~------------------- 134 (262)
T Consensus 93 ~~l~~~~~l~~~-G~~~~~~~~----~~~~~----~~~l~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~~~~~~~~~~~ 163 (374)
T cd01317 93 EELTEIGELLEA-GAVGFSDDG----KPIQD----AELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGKVASRLGLP 163 (374)
T ss_pred HHHHHHHHHHHC-CCEEEECCC----CCCCC----HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHCCCC
T ss_conf 255657889860-854673499----63457----999999999887549859993798678654665058631520899
Q ss_pred -----HHH---HHHHHHHHHCCCCCC-CCEECC-CCHHHHHHHHCCCCEEE---------CC--------------CCCC
Q ss_conf -----357---999853100036753-311214-64023443210352020---------23--------------3221
Q gi|254780215|r 135 -----DDM---AAILQEEMKKGPFPF-VIHCFS-SSQKLADICLELGGYIS---------FT--------------GMIT 181 (262)
Q Consensus 135 -----~~~---l~iL~~~~~~~~~~~-i~H~Fs-G~~~~~~~~l~~g~y~S---------~~--------------g~i~ 181 (262)
T Consensus 164 ~~p~~~E~~ai~~~~-~la~~~g~~vhi~Hiss~~~l~li~~ar~~G~~vt~e~~p~~L~~~~~~~~~~~~~~k~~PPlr 242 (374)
T cd01317 164 GIPPEAETIMVARDL-ELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNPPLR 242 (374)
T ss_pred CCCHHHHHHHHHHHH-HHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCHHHHHCCCCCCCCCCCCC
T ss_conf 999999999999999-9999729848973435588999999998748977999725653588878606676524689878
Q ss_pred HH-HHHHHHHHHHCCCCCCEEEEEC-CCCCCCCC---C----CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 13-3322333321056671798307-86678777---6----88758824499999999987289989999999999999
Q gi|254780215|r 182 FP-KYDALRAIARGIPMDRVLVETD-SPYIVPVS---C----QGKRNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALK 252 (262)
Q Consensus 182 ~~-~~~~~~e~v~~iPldriLlETD-sP~l~p~~---~----r~~~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~ 252 (262)
T Consensus 243 ~~~d~~~L~~~l~~g~id--~i~sDH~p~~~~~k~~~~~~a~~G~~g~e~~lp~l~~~~v~~~~lsle~~v~~~s~nPAk 320 (374)
T cd01317 243 SEEDREALIEALKDGTID--AIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPAK 320 (374)
T ss_pred CHHHHHHHHHHHHCCCCE--EEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 556799999999739934--999689888877745776547767865004699999999985999999999999799999
Q ss_pred HHHH
Q ss_conf 8425
Q gi|254780215|r 253 LFSK 256 (262)
Q Consensus 253 ~f~~ 256 (262)
T Consensus 321 ~lgl 324 (374)
T cd01317 321 ILGL 324 (374)
T ss_pred HHCC
T ss_conf 9699