HHsearch results for GI: 254780215 and protein with PDBid: 1j5s_A
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=92.58 E-value=0.31 Score=27.48 Aligned_cols=132 Identities=11% Similarity=0.053 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHCCCCCEEEC---HHHH-----------------------HHHHHHHHHHHHCCCCCCCC-EECCCCHH
Q ss_conf 789999876642044203300---0233-----------------------35799985310003675331-12146402
Q gi|254780215|r 110 VVFLRHIEASRITGIPLVIHS---RSAD-----------------------DDMAAILQEEMKKGPFPFVI-HCFSSSQK 162 (262)
Q Consensus 110 ~vF~~ql~lA~e~~~pv~iH~---r~a~-----------------------~~~l~iL~~~~~~~~~~~i~-H~FsG~~~ 162 (262)
.+|....+++.+.++|+.+|. |+.. ..+++.|.+.... .++|+ |. ++.
T Consensus 283 ~ll~~l~~~~~e~g~vmQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ll~~l~~~~~~--~k~il~~l---~~~ 357 (463)
T 1j5s_A 283 FMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEGLRYFLNEFDGK--LKIVLYVL---DPT 357 (463)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHHHHHHHHHSTTT--SCEEEEES---SGG
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEEC---CCC
T ss_conf 9999999997437952786105675646899998589988778666599999999999837999--85799858---963
Q ss_pred HHHHHH-----------CCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEE-EEECCCCCCCCCCCCCCCCHHHHHH-HHH
Q ss_conf 344321-----------035202023322113332233332105667179-8307866787776887588244999-999
Q gi|254780215|r 163 LADICL-----------ELGGYISFTGMITFPKYDALRAIARGIPMDRVL-VETDSPYIVPVSCQGKRNEPAYVVN-TAK 229 (262)
Q Consensus 163 ~~~~~l-----------~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriL-lETDsP~l~p~~~r~~~n~P~~i~~-~~~ 229 (262)
.-+++. +.||||..++.-. ...++.++...|+.+++ .=|||-.+..-+.|-+ +-.+ .+.
T Consensus 358 ~~~ela~lag~f~~v~~g~~WWf~d~~~gm---~~~l~~~~e~~~~s~fvG~~tDsRsfls~~~rhe-----~fRRiL~~ 429 (463)
T 1j5s_A 358 HLPTISTIARAFPNVYVGAPWWFNDSPFGM---EMHLKYLASVDLLYNLAGMVTDSRKLLSFGSRTE-----MFRRVLSN 429 (463)
T ss_dssp GHHHHHHHHHHCTTEEECCCCSTTCSHHHH---HHHHHHHHTTSCGGGCCCCCCCCSSTTHHHHHHH-----HHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEECCHHHHCCCHHHH---HHHHHHHHHHCCCCCEECEECCCCCHHHHHHHHH-----HHHHHHHH
T ss_conf 099999998529877123704640879999---9999999985062244011268740211169999-----99999999
Q ss_pred HHHHH---HCCCHH----HHHHHHHHHHHHHH
Q ss_conf 99987---289989----99999999999984
Q gi|254780215|r 230 ALAKE---KDVSYE----DLMEETTKNALKLF 254 (262)
Q Consensus 230 ~iA~i---~~~~~e----ei~~~~~~N~~~~f 254 (262)
.+++. -.++.+ -+..+++.|++++|
T Consensus 430 ~L~~~Ve~G~l~~~~a~~i~~~I~y~Na~~~f 461 (463)
T 1j5s_A 430 VVGEMVEKGQIPIKEARELVKHVSYDGPKALF 461 (463)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHC
T ss_conf 99999986998999999999999976889762