HHsearch results for GI: 254780215 and protein with PDBid: 1p1m_A
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=97.40 E-value=0.0069 Score=38.48 Aligned_cols=139 Identities=12% Similarity=0.149 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHCCCCCEEECHHHHHH---HHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHCCCCEEECCCCCCHHHH
Q ss_conf 6789999876642044203300023335---7999853100036753311214640234432103520202332211333
Q gi|254780215|r 109 KVVFLRHIEASRITGIPLVIHSRSADDD---MAAILQEEMKKGPFPFVIHCFSSSQKLADICLELGGYISFTGMITFPKY 185 (262)
Q Consensus 109 ~~vF~~ql~lA~e~~~pv~iH~r~a~~~---~l~iL~~~~~~~~~~~i~H~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~ 185 (262)
.+...+-.++|++++.++.+|+.....+ ....+.. ..........|+..-+.+.+..+.+.|..+..++.......
T Consensus 180 ~~~~~~~~~~a~~~~~~~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (406)
T 1p1m_A 180 EEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNI-GLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLG 258 (406)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTT-TTTTSCEEEEECTTCCGGGTTTTTTSSEEEEECHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHC-CCCCCCEEEEEEECCCHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf 99999999999975996554114560666666777641-77776124444521538999875405833541502566642
Q ss_pred H---HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2---233332105667179830786678777688758824499999999987---2899899999999999998425
Q gi|254780215|r 186 D---ALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKE---KDVSYEDLMEETTKNALKLFSK 256 (262)
Q Consensus 186 ~---~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i---~~~~~eei~~~~~~N~~~~f~~ 256 (262)
. ...... ..-.++.+-||.....+.+ .+..-...+..+.+. .+++.+++.+..+.|.-+.||.
T Consensus 259 ~~~~~~~~~~--~~g~~~~~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~n~A~~lGl 327 (406)
T 1p1m_A 259 NGIAPVQRMI--EHGMKVTLGTDGAASNNSL------NLFFEMRLASLLQKAQNPRNLDVNTCLKMVTYDGAQAMGF 327 (406)
T ss_dssp CCCCCHHHHH--HTTCEEEECCCCTTTTSCC------CHHHHHHHHHHHHHTTCTTSSCHHHHHHHHTHHHHHHHTC
T ss_pred CCCCCHHHHH--HCCCCEEECCCCCCCCCCH------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 4667599998--5798467514446777640------4679999999986422334455999999987539998299