HHsearch results for GI: 254780215 and protein with PDBid: 2gzx_A
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural genomics, PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=100.00 E-value=0 Score=497.26 Aligned_cols=255 Identities=38% Similarity=0.598 Sum_probs=243.4
Q ss_pred CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 91686138887565226899999999869989999167987789999999855723321124454433446788998853
Q gi|254780215|r 1 MLIDTHCHLLLPDFDEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELV 80 (262)
Q Consensus 1 M~iD~H~HL~~~~~~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~ 80 (262)
||||+||||++..|++|+++++++|+++||.+++++|+++++|.++++++++|| .+++++|+|||++..+.+...+.+.
T Consensus 1 MlID~H~HL~~~~~~~d~~~vi~~a~~~gv~~ii~~~~~~~~~~~~~~l~~~~~-~i~~~~G~HP~~~~~~~~~~~~~~~ 79 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYD-FLYGIIGWHPVDAIDFTEEHLEWIE 79 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHH
T ss_pred CEEEECCCCCCHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCC-CEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 949866698973547599999999998799889992589999999999996588-6788438887514453244578999
Q ss_pred HHCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCEECCCC
Q ss_conf 10013332100446775533221110246789999876642044203300023335799985310003675331121464
Q gi|254780215|r 81 CLASHPRVVAIGETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRSADDDMAAILQEEMKKGPFPFVIHCFSSS 160 (262)
Q Consensus 81 ~l~~~~~~~aIGEiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~a~~~~l~iL~~~~~~~~~~~i~H~FsG~ 160 (262)
.+...++++|||||||||++...+.+.|+++|++||++|.++++||+||||+|+++++++|+++... ..++|+|||+|+
T Consensus 80 ~~~~~~~~~aiGEiGLD~~~~~~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~a~~~~~~il~~~~~~-~~~~v~H~fsg~ 158 (265)
T 2gzx_A 80 SLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAE-EVGGIMHSFSGS 158 (265)
T ss_dssp HHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTGG-GTCEEETTCCSC
T ss_pred HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCC-CCEEEEEECCCC
T ss_conf 9982887246513564433267749899999999999999869928999754307799999971577-870899835899
Q ss_pred HHHHHHHHCC-CCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
Q ss_conf 0234432103-520202332211333223333210566717983078667877768875882449999999998728998
Q gi|254780215|r 161 QKLADICLEL-GGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKALAKEKDVSY 239 (262)
Q Consensus 161 ~~~~~~~l~~-g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~iA~i~~~~~ 239 (262)
.+++++++++ |+|+||+|.+++++++++|++++.+|+||||+||||||++|.|+||++|+|++++.|++++|++||+++
T Consensus 159 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~~~~iPldrlLlETD~P~~~p~~~~~~~n~P~~l~~~~~~lA~i~~~~~ 238 (265)
T 2gzx_A 159 PEIADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSY 238 (265)
T ss_dssp HHHHHHHHHTSCCEEEECGGGGCSSCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999968996884576554132799999973880544750478655765557877974899999999998859899
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999842568
Q gi|254780215|r 240 EDLMEETTKNALKLFSKIS 258 (262)
Q Consensus 240 eei~~~~~~N~~~~f~~~~ 258 (262)
+++++++++|++++|| ++
T Consensus 239 ~el~~~~~~N~~~lf~-l~ 256 (265)
T 2gzx_A 239 EEVCEQTTKNAEKLFN-LN 256 (265)
T ss_dssp HHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHCC-CC
T ss_conf 9999999999999829-99