HHsearch results for GI: 254780215 and protein with PDBid: 3e2v_A
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.50A {Saccharomyces cerevisiae YJM789}
Probab=100.00 E-value=0 Score=496.94 Aligned_cols=255 Identities=27% Similarity=0.382 Sum_probs=227.5
Q ss_pred EEEEECCCCCHHH----------HCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC----CCCCCCCCCCCC
Q ss_conf 1686138887565----------22689999999986998999916798778999999985572----332112445443
Q gi|254780215|r 2 LIDTHCHLLLPDF----------DEDRHDVIMRAHQANVLKMIAIAIKVKDFVPLIKLCQDYPS----SIFCSVGTHPCH 67 (262)
Q Consensus 2 ~iD~H~HL~~~~~----------~~d~~~~i~~a~~~gv~~~i~~~~~~~~~~~~~~l~~~~p~----~i~~a~GiHP~~ 67 (262)
+||+||||.+..| +.|++++|+||+++||.+++++|+++++|.++++|+++|++ +||+++|||||+
T Consensus 14 ~iD~~~~L~d~~F~~~y~~~~~hd~Dl~~Vl~rA~~~GV~~ii~~g~~~~~~~~a~~La~~~~~~~p~~i~~avGiHP~~ 93 (401)
T 3e2v_A 14 YYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVHPCC 93 (401)
T ss_dssp EEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHTTTCSSEEEEEECCCGGG
T ss_pred EEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH
T ss_conf 38973478995766844676677137999999999879998999159999999999999966235776089998518141
Q ss_pred CCCCCHHH------------------------------------HHHHHHH------CCCCCCCEECCCCCCCCC-CCCC
Q ss_conf 34467889------------------------------------9885310------013332100446775533-2211
Q gi|254780215|r 68 AHEENEVL------------------------------------VDELVCL------ASHPRVVAIGETGLDRYH-NAHT 104 (262)
Q Consensus 68 ~~~~~~~~------------------------------------~~~l~~l------~~~~~~~aIGEiGLD~~~-~~~~ 104 (262)
+.+..+.. ++.+..+ ...++++|||||||||++ +..+
T Consensus 94 a~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~l~~l~~~~~~~~~~~~~~vvAIGEiGLDy~~~~~~~ 173 (401)
T 3e2v_A 94 VNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSS 173 (401)
T ss_dssp GGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCTTTSC
T ss_pred HCCCCCHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf 00156101000011101233322100133432201452013678999999999987733898799998036889778998
Q ss_pred CHHHHHHHHHHHHHH----HHCCCCCEEECHHHHHHHHHHHHHHHHC-------------------------CCCCCCCE
Q ss_conf 102467899998766----4204420330002333579998531000-------------------------36753311
Q gi|254780215|r 105 IEEQKVVFLRHIEAS----RITGIPLVIHSRSADDDMAAILQEEMKK-------------------------GPFPFVIH 155 (262)
Q Consensus 105 ~e~Q~~vF~~ql~lA----~e~~~pv~iH~r~a~~~~l~iL~~~~~~-------------------------~~~~~i~H 155 (262)
++.|+++|++||+|| +++++||+||||+|+++++++|+++... .+.++|+|
T Consensus 174 ~e~Q~~~F~~QL~lA~~~~k~~~lPv~iH~R~A~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~H 253 (401)
T 3e2v_A 174 KEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKLVVH 253 (401)
T ss_dssp HHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESCHHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999999999999998515308853999644269999999986014443221000000121112221123677656998
Q ss_pred ECCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC------------------
Q ss_conf 21464023443210352020233221133322333321056671798307866787776887------------------
Q gi|254780215|r 156 CFSSSQKLADICLELGGYISFTGMITFPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGK------------------ 217 (262)
Q Consensus 156 ~FsG~~~~~~~~l~~g~y~S~~g~i~~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~------------------ 217 (262)
||||+.+++++++++|+|||||+.+++.++.+++++++.+|+||||+|||||||+|.|.++.
T Consensus 254 ~FsG~~~~a~~~l~lg~~~~~s~~~~~~~~~~~~~~vk~iPldrlLlETDaPyl~p~p~~~~~~~~~~~~~~~~~~~~~~ 333 (401)
T 3e2v_A 254 SFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAF 333 (401)
T ss_dssp SCCCCHHHHHHHHHHCTTEEEEECGGGGSSHHHHHHHHTSCGGGEEECCCTTSCCCCTTSTTHHHHHHHHHHSCCCSSSS
T ss_pred ECCCCHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 05796788777750587499987665434567999998699467798257887677676676433233333222344442
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ----------------------588244999999999872899899999999999998425
Q gi|254780215|r 218 ----------------------RNEPAYVVNTAKALAKEKDVSYEDLMEETTKNALKLFSK 256 (262)
Q Consensus 218 ----------------------~n~P~~i~~~~~~iA~i~~~~~eei~~~~~~N~~~~f~~ 256 (262)
+|+|++|+.|++.||++|+++++++++++++|+++|||.
T Consensus 334 ~~~k~~k~~~~~~~~~~~~~k~RNEP~~i~~v~~~iA~lk~~~~eeva~~~~~N~~~lFgl 394 (401)
T 3e2v_A 334 KSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIFGE 394 (401)
T ss_dssp EEECGGGSGGGTTSSSCEEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
T ss_conf 2112111233333221134677887657999999999762999999999999999999579