HHsearch results for GI: 254780215 and protein with PDBid: 3irs_A
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TIM-barrel protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.60 E-value=1e-13 Score=110.55 Aligned_cols=210 Identities=10% Similarity=0.098 Sum_probs=134.0
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCH-----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE
Q ss_conf 2689999999986998999916798-----77899999998557233211244544334467889988531001333210
Q gi|254780215|r 16 EDRHDVIMRAHQANVLKMIAIAIKV-----KDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA 90 (262)
Q Consensus 16 ~d~~~~i~~a~~~gv~~~i~~~~~~-----~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a 90 (262)
.+.++.++.+..+||.+.|+++... .+.+...+++++||+.+.+..+++|+.. +...+++++.... .+++
T Consensus 47 ~~~e~~l~~Md~~GI~~~vl~~~~~~~~~~~~N~~~~~~~~~~pdR~~~~a~v~p~~~----~~a~~el~~~~~~-G~~g 121 (291)
T 3irs_A 47 KSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAATR----KEAMAQMQEILDL-GIRI 121 (291)
T ss_dssp TCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCSSH----HHHHHHHHHHHHT-TCCC
T ss_pred CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCH----HHHHHHHHHHHHC-CCEE
T ss_conf 9999999999980996999964576644576879999999978991998026898875----9999999999865-9738
Q ss_pred EC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH--------HHH-HHHHHHHHHHHCCCCCCCC-EE
Q ss_conf 04----4677553322111024678999987664204420330002--------333-5799985310003675331-12
Q gi|254780215|r 91 IG----ETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS--------ADD-DMAAILQEEMKKGPFPFVI-HC 156 (262)
Q Consensus 91 IG----EiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~--------a~~-~~l~iL~~~~~~~~~~~i~-H~ 156 (262)
|+ .-|.+++-+ -..|...++.|.++++||.+|+-. +.- .+-+++.++ +..++++ |+
T Consensus 122 v~l~p~~~~~~~~~~-------d~~~~p~~~~a~e~glpv~iH~g~~~~~~~~~~~p~~l~~~~~r~---P~l~~v~~H~ 191 (291)
T 3irs_A 122 VNLEPGVWATPMHVD-------DRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDF---PDLTVVSSHG 191 (291)
T ss_dssp EEECGGGSSSCCCTT-------CGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHC---TTCCEEEEGG
T ss_pred EEEECCCCCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC---CCCEEEEECC
T ss_conf 998647767897999-------889999999999739869981477777422348999974345309---9967999458
Q ss_pred CCCCHHHHHHHHC-----CCCEEECCCCCC-HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 1464023443210-----352020233221-1333223333210566717983078667877768875882449999999
Q gi|254780215|r 157 FSSSQKLADICLE-----LGGYISFTGMIT-FPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKA 230 (262)
Q Consensus 157 FsG~~~~~~~~l~-----~g~y~S~~g~i~-~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~ 230 (262)
.+ .....+++ -+.|+..|.... ......+.+++..+..||+|.-||.|+.. ....++.
T Consensus 192 -G~--~~~~~~~~~~~~~~Nvy~d~s~~~~~~~~~~~~~~~~~~~g~dRvlfGSD~P~~~-------------~~~~~~~ 255 (291)
T 3irs_A 192 -NW--PWVQEIIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCP-------------LKEYTEW 255 (291)
T ss_dssp -GT--TCHHHHHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSC-------------HHHHHHH
T ss_pred -CC--CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC-------------HHHHHHH
T ss_conf -87--3299999998768977997333044577679999999984998099968999999-------------8999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 998728998999999999999984256
Q gi|254780215|r 231 LAKEKDVSYEDLMEETTKNALKLFSKI 257 (262)
Q Consensus 231 iA~i~~~~~eei~~~~~~N~~~~f~~~ 257 (262)
+.. .+++.++..++.++|+.||||+-
T Consensus 256 ~~~-~~l~~e~~~~Il~~NA~rl~gl~ 281 (291)
T 3irs_A 256 FLT-LPIKPDAMEKILHGNAERLLAQA 281 (291)
T ss_dssp HHT-SSCCHHHHHHHHTHHHHHHHHHS
T ss_pred HHH-CCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 996-79799999999849999996736