HHsearch results for GI: 254780215 and protein with PDBid: 3irs_A

>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TIM-barrel protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.60  E-value=1e-13  Score=110.55  Aligned_cols=210  Identities=10%  Similarity=0.098  Sum_probs=134.0

Q ss_pred             CCHHHHHHHHHHCCCCEEEEECCCH-----HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE
Q ss_conf             2689999999986998999916798-----77899999998557233211244544334467889988531001333210
Q gi|254780215|r   16 EDRHDVIMRAHQANVLKMIAIAIKV-----KDFVPLIKLCQDYPSSIFCSVGTHPCHAHEENEVLVDELVCLASHPRVVA   90 (262)
Q Consensus        16 ~d~~~~i~~a~~~gv~~~i~~~~~~-----~~~~~~~~l~~~~p~~i~~a~GiHP~~~~~~~~~~~~~l~~l~~~~~~~a   90 (262)
                      .+.++.++.+..+||.+.|+++...     .+.+...+++++||+.+.+..+++|+..    +...+++++.... .+++
T Consensus        47 ~~~e~~l~~Md~~GI~~~vl~~~~~~~~~~~~N~~~~~~~~~~pdR~~~~a~v~p~~~----~~a~~el~~~~~~-G~~g  121 (291)
T 3irs_A           47 KSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAATR----KEAMAQMQEILDL-GIRI  121 (291)
T ss_dssp             TCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCSSH----HHHHHHHHHHHHT-TCCC
T ss_pred             CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCH----HHHHHHHHHHHHC-CCEE
T ss_conf             9999999999980996999964576644576879999999978991998026898875----9999999999865-9738


Q ss_pred             EC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHH--------HHH-HHHHHHHHHHHCCCCCCCC-EE
Q ss_conf             04----4677553322111024678999987664204420330002--------333-5799985310003675331-12
Q gi|254780215|r   91 IG----ETGLDRYHNAHTIEEQKVVFLRHIEASRITGIPLVIHSRS--------ADD-DMAAILQEEMKKGPFPFVI-HC  156 (262)
Q Consensus        91 IG----EiGLD~~~~~~~~e~Q~~vF~~ql~lA~e~~~pv~iH~r~--------a~~-~~l~iL~~~~~~~~~~~i~-H~  156 (262)
                      |+    .-|.+++-+       -..|...++.|.++++||.+|+-.        +.- .+-+++.++   +..++++ |+
T Consensus       122 v~l~p~~~~~~~~~~-------d~~~~p~~~~a~e~glpv~iH~g~~~~~~~~~~~p~~l~~~~~r~---P~l~~v~~H~  191 (291)
T 3irs_A          122 VNLEPGVWATPMHVD-------DRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDF---PDLTVVSSHG  191 (291)
T ss_dssp             EEECGGGSSSCCCTT-------CGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHC---TTCCEEEEGG
T ss_pred             EEEECCCCCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC---CCCEEEEECC
T ss_conf             998647767897999-------889999999999739869981477777422348999974345309---9967999458


Q ss_pred             CCCCHHHHHHHHC-----CCCEEECCCCCC-HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             1464023443210-----352020233221-1333223333210566717983078667877768875882449999999
Q gi|254780215|r  157 FSSSQKLADICLE-----LGGYISFTGMIT-FPKYDALRAIARGIPMDRVLVETDSPYIVPVSCQGKRNEPAYVVNTAKA  230 (262)
Q Consensus       157 FsG~~~~~~~~l~-----~g~y~S~~g~i~-~~~~~~~~e~v~~iPldriLlETDsP~l~p~~~r~~~n~P~~i~~~~~~  230 (262)
                       .+  .....+++     -+.|+..|.... ......+.+++..+..||+|.-||.|+..             ....++.
T Consensus       192 -G~--~~~~~~~~~~~~~~Nvy~d~s~~~~~~~~~~~~~~~~~~~g~dRvlfGSD~P~~~-------------~~~~~~~  255 (291)
T 3irs_A          192 -NW--PWVQEIIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLFGTAYPMCP-------------LKEYTEW  255 (291)
T ss_dssp             -GT--TCHHHHHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSC-------------HHHHHHH
T ss_pred             -CC--CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCC-------------HHHHHHH
T ss_conf             -87--3299999998768977997333044577679999999984998099968999999-------------8999999


Q ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             998728998999999999999984256
Q gi|254780215|r  231 LAKEKDVSYEDLMEETTKNALKLFSKI  257 (262)
Q Consensus       231 iA~i~~~~~eei~~~~~~N~~~~f~~~  257 (262)
                      +.. .+++.++..++.++|+.||||+-
T Consensus       256 ~~~-~~l~~e~~~~Il~~NA~rl~gl~  281 (291)
T 3irs_A          256 FLT-LPIKPDAMEKILHGNAERLLAQA  281 (291)
T ss_dssp             HHT-SSCCHHHHHHHHTHHHHHHHHHS
T ss_pred             HHH-CCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             996-79799999999849999996736